Query 006334
Match_columns 650
No_of_seqs 321 out of 2470
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 22:14:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006334.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006334hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 1.4E-42 4.7E-47 363.4 34.1 276 20-315 7-286 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 2.7E-41 9.2E-46 351.7 35.4 268 8-293 35-302 (302)
3 2xn4_A Kelch-like protein 2; s 100.0 2.4E-40 8.2E-45 344.5 36.4 263 33-315 11-275 (302)
4 2vpj_A Kelch-like protein 12; 100.0 2.3E-40 7.9E-45 344.1 35.6 262 35-315 12-277 (301)
5 3ii7_A Kelch-like protein 7; p 100.0 2.5E-40 8.4E-45 345.0 35.2 257 37-315 11-271 (306)
6 1zgk_A Kelch-like ECH-associat 100.0 3.6E-40 1.2E-44 345.0 34.3 261 8-289 44-308 (308)
7 3ii7_A Kelch-like protein 7; p 100.0 4.4E-40 1.5E-44 343.2 32.6 264 8-291 29-295 (306)
8 4asc_A Kelch repeat and BTB do 100.0 1.2E-40 4E-45 349.5 27.5 271 7-298 17-305 (315)
9 2vpj_A Kelch-like protein 12; 100.0 1.2E-39 4.2E-44 338.6 33.1 262 8-290 36-300 (301)
10 2woz_A Kelch repeat and BTB do 100.0 2.2E-40 7.4E-45 348.0 26.6 271 7-298 28-315 (318)
11 2uvk_A YJHT; unknown function, 100.0 1.2E-39 4E-44 347.3 29.8 278 22-316 4-342 (357)
12 4asc_A Kelch repeat and BTB do 100.0 5.1E-39 1.8E-43 337.0 28.6 258 36-315 3-276 (315)
13 2woz_A Kelch repeat and BTB do 100.0 4.1E-38 1.4E-42 330.6 31.7 265 26-315 7-286 (318)
14 2zwa_A Leucine carboxyl methyl 100.0 2.4E-36 8.3E-41 351.2 30.7 282 22-315 383-693 (695)
15 2uvk_A YJHT; unknown function, 100.0 4.7E-34 1.6E-38 304.0 26.6 246 12-273 42-350 (357)
16 2zwa_A Leucine carboxyl methyl 100.0 2.1E-30 7.3E-35 301.2 28.5 233 73-316 384-635 (695)
17 1k3i_A Galactose oxidase precu 100.0 8.1E-31 2.8E-35 302.7 24.5 274 7-300 170-531 (656)
18 1k3i_A Galactose oxidase precu 99.9 1.1E-25 3.6E-30 259.9 24.6 243 55-315 168-496 (656)
19 3dsm_A Uncharacterized protein 98.0 0.0078 2.7E-07 62.3 31.0 246 25-315 41-301 (328)
20 3dsm_A Uncharacterized protein 97.8 0.019 6.6E-07 59.2 29.7 226 52-317 16-254 (328)
21 3mbr_X Glutamine cyclotransfer 97.3 0.073 2.5E-06 53.2 23.7 201 78-315 21-234 (243)
22 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.29 1E-05 50.7 29.8 224 29-315 95-336 (376)
23 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.33 1.1E-05 50.3 32.2 226 32-315 48-295 (376)
24 3mbr_X Glutamine cyclotransfer 97.1 0.12 4E-06 51.7 23.5 199 29-263 22-233 (243)
25 1l0q_A Surface layer protein; 97.1 0.065 2.2E-06 55.5 22.5 223 38-315 2-232 (391)
26 3nol_A Glutamine cyclotransfer 97.0 0.11 3.8E-06 52.4 22.0 199 79-314 44-254 (262)
27 2ovr_B FBW7, F-BOX/WD repeat p 96.9 0.47 1.6E-05 50.3 27.7 221 54-316 220-442 (445)
28 3v9f_A Two-component system se 96.9 0.078 2.7E-06 61.5 22.8 224 37-299 417-646 (781)
29 2hqs_A Protein TOLB; TOLB, PAL 96.8 0.15 5.1E-06 54.3 22.9 224 53-315 159-386 (415)
30 3nol_A Glutamine cyclotransfer 96.8 0.23 7.8E-06 50.1 22.4 195 31-262 46-253 (262)
31 4ery_A WD repeat-containing pr 96.8 0.43 1.5E-05 47.7 24.9 231 37-316 34-268 (312)
32 3bws_A Protein LP49; two-domai 96.7 0.24 8.3E-06 51.9 23.4 201 37-271 180-396 (433)
33 4a2l_A BT_4663, two-component 96.7 0.33 1.1E-05 56.3 26.5 212 53-298 427-648 (795)
34 3nok_A Glutaminyl cyclase; bet 96.7 0.1 3.5E-06 52.8 18.9 155 79-267 56-212 (268)
35 1p22_A F-BOX/WD-repeat protein 96.6 0.32 1.1E-05 51.5 23.8 226 34-315 139-364 (435)
36 1l0q_A Surface layer protein; 96.6 0.35 1.2E-05 49.9 23.0 222 38-315 44-274 (391)
37 3nok_A Glutaminyl cyclase; bet 96.5 0.25 8.7E-06 49.9 20.7 156 30-220 57-215 (268)
38 2ojh_A Uncharacterized protein 96.5 0.33 1.1E-05 47.0 21.4 229 51-316 20-258 (297)
39 3vgz_A Uncharacterized protein 96.5 0.82 2.8E-05 46.0 28.2 198 38-271 101-309 (353)
40 1gxr_A ESG1, transducin-like e 96.5 0.44 1.5E-05 47.4 22.6 214 38-299 109-326 (337)
41 3bws_A Protein LP49; two-domai 96.5 0.32 1.1E-05 51.0 22.3 198 37-270 133-339 (433)
42 3jrp_A Fusion protein of prote 96.4 0.25 8.4E-06 50.3 20.5 195 37-266 22-241 (379)
43 2ovr_B FBW7, F-BOX/WD repeat p 96.3 1.1 3.9E-05 47.2 25.6 211 54-315 180-390 (445)
44 1k8k_C P40, ARP2/3 complex 41 96.3 0.42 1.4E-05 48.5 21.3 151 37-214 19-172 (372)
45 2hqs_A Protein TOLB; TOLB, PAL 96.2 0.25 8.5E-06 52.6 19.7 203 37-272 189-394 (415)
46 1rwi_B Serine/threonine-protei 96.1 0.8 2.7E-05 44.4 21.7 226 37-316 34-264 (270)
47 3ow8_A WD repeat-containing pr 96.1 1.3 4.4E-05 45.0 23.9 178 53-269 102-283 (321)
48 4aez_A CDC20, WD repeat-contai 96.1 0.77 2.6E-05 47.9 22.7 218 54-315 157-379 (401)
49 2iwa_A Glutamine cyclotransfer 96.1 1.3 4.5E-05 44.6 23.3 201 79-316 22-237 (266)
50 4ery_A WD repeat-containing pr 96.1 1.3 4.5E-05 44.0 26.1 191 38-268 77-271 (312)
51 2z3z_A Dipeptidyl aminopeptida 96.0 0.58 2E-05 52.9 22.9 194 102-315 234-434 (706)
52 1gxr_A ESG1, transducin-like e 96.0 0.51 1.8E-05 46.9 19.8 226 37-315 62-295 (337)
53 2xdw_A Prolyl endopeptidase; a 95.9 1.2 4E-05 50.8 24.9 217 37-272 135-376 (710)
54 2iwa_A Glutamine cyclotransfer 95.8 1.6 5.6E-05 43.9 22.6 199 31-265 24-237 (266)
55 3v7d_B Cell division control p 95.8 2.5 8.4E-05 44.6 26.2 149 86-270 278-426 (464)
56 2ojh_A Uncharacterized protein 95.7 0.42 1.5E-05 46.2 17.5 203 37-272 52-265 (297)
57 3v9f_A Two-component system se 95.7 0.2 6.9E-06 58.0 17.5 211 54-297 384-600 (781)
58 2ecf_A Dipeptidyl peptidase IV 95.7 0.66 2.3E-05 52.6 21.5 215 37-272 47-328 (741)
59 1ri6_A Putative isomerase YBHE 95.7 1.6 5.4E-05 43.5 22.0 198 38-270 5-216 (343)
60 1jmx_B Amine dehydrogenase; ox 95.6 1.1 3.7E-05 44.9 20.8 161 37-220 10-180 (349)
61 3zwl_B Eukaryotic translation 95.6 1.3 4.6E-05 44.3 21.6 199 37-271 43-255 (369)
62 1pjx_A Dfpase, DIISOPROPYLFLUO 95.6 1.2 4E-05 44.2 20.7 245 37-315 28-298 (314)
63 3zwl_B Eukaryotic translation 95.5 1.8 6E-05 43.4 21.9 237 38-315 86-345 (369)
64 2z3z_A Dipeptidyl aminopeptida 95.5 0.42 1.4E-05 54.0 18.8 195 52-267 234-437 (706)
65 3ow8_A WD repeat-containing pr 95.5 2.5 8.6E-05 42.7 23.1 226 38-315 48-278 (321)
66 2dg1_A DRP35, lactonase; beta 95.5 0.89 3E-05 45.8 19.5 249 37-315 55-315 (333)
67 4a2l_A BT_4663, two-component 95.5 0.61 2.1E-05 54.0 20.4 212 54-297 378-603 (795)
68 3e5z_A Putative gluconolactona 95.4 2.4 8.1E-05 42.0 24.4 239 29-316 29-286 (296)
69 3hfq_A Uncharacterized protein 95.3 1.5 5.3E-05 44.2 20.8 196 54-272 19-227 (347)
70 3g4e_A Regucalcin; six bladed 95.3 1.8 6.1E-05 43.3 20.9 232 28-298 13-261 (297)
71 1kb0_A Quinohemoprotein alcoho 95.2 1.7 5.9E-05 49.5 23.0 124 32-170 72-206 (677)
72 3v7d_B Cell division control p 95.2 3.7 0.00013 43.2 26.3 231 35-315 129-380 (464)
73 3no2_A Uncharacterized protein 95.2 2.9 9.8E-05 41.7 24.2 215 37-297 4-230 (276)
74 1k8k_C P40, ARP2/3 complex 41 95.2 2 6.9E-05 43.3 21.2 203 37-273 63-284 (372)
75 2vdu_B TRNA (guanine-N(7)-)-me 95.2 3.3 0.00011 43.8 23.7 154 38-220 115-276 (450)
76 1r5m_A SIR4-interacting protei 95.1 2.3 7.8E-05 43.5 21.6 146 88-267 217-363 (425)
77 2xbg_A YCF48-like protein; pho 95.0 3.7 0.00013 42.0 24.0 240 13-298 66-311 (327)
78 2ad6_A Methanol dehydrogenase 95.0 3.3 0.00011 46.2 23.9 123 32-170 57-192 (571)
79 3mkq_A Coatomer beta'-subunit; 95.0 2.8 9.5E-05 47.8 23.8 228 37-315 24-258 (814)
80 3c5m_A Oligogalacturonate lyas 94.9 2.9 9.9E-05 42.6 21.8 156 102-273 167-337 (396)
81 2xdw_A Prolyl endopeptidase; a 94.9 2.2 7.4E-05 48.6 22.6 260 36-314 82-366 (710)
82 3jro_A Fusion protein of prote 94.8 0.55 1.9E-05 54.2 17.4 195 37-266 20-239 (753)
83 1got_B GT-beta; complex (GTP-b 94.8 4 0.00014 41.4 23.1 228 37-315 66-300 (340)
84 3azo_A Aminopeptidase; POP fam 94.7 0.88 3E-05 50.9 18.4 241 52-315 101-368 (662)
85 1p22_A F-BOX/WD-repeat protein 94.7 1.7 5.7E-05 45.8 19.6 186 84-315 139-324 (435)
86 1qhu_A Protein (hemopexin); be 94.7 4.5 0.00015 44.0 23.0 184 37-265 158-385 (460)
87 1vyh_C Platelet-activating fac 94.6 5 0.00017 42.0 23.1 147 38-219 120-269 (410)
88 1kb0_A Quinohemoprotein alcoho 94.6 3.7 0.00013 46.8 23.3 124 83-222 73-208 (677)
89 3fm0_A Protein CIAO1; WDR39,SG 94.6 1.1 3.6E-05 46.0 17.2 184 37-251 27-216 (345)
90 3dwl_C Actin-related protein 2 94.5 0.2 6.9E-06 51.4 11.5 152 37-215 22-177 (377)
91 3vgz_A Uncharacterized protein 94.5 4.4 0.00015 40.5 30.6 235 38-315 53-302 (353)
92 1sq9_A Antiviral protein SKI8; 94.4 5.2 0.00018 40.8 23.5 203 36-268 24-270 (397)
93 3iuj_A Prolyl endopeptidase; h 94.3 3.8 0.00013 46.5 22.8 211 37-272 139-366 (693)
94 2z2n_A Virginiamycin B lyase; 94.3 4.2 0.00014 39.5 23.0 186 37-267 109-297 (299)
95 3jrp_A Fusion protein of prote 94.3 1.6 5.3E-05 44.1 17.5 200 38-273 69-296 (379)
96 3k26_A Polycomb protein EED; W 94.2 2.8 9.7E-05 41.9 19.3 108 38-167 85-194 (366)
97 3scy_A Hypothetical bacterial 94.2 5.4 0.00018 40.4 21.9 114 39-165 14-129 (361)
98 4g56_B MGC81050 protein; prote 94.2 1.6 5.5E-05 45.0 17.6 183 87-315 150-342 (357)
99 3c5m_A Oligogalacturonate lyas 94.1 0.79 2.7E-05 47.0 15.1 202 53-272 168-391 (396)
100 4gga_A P55CDC, cell division c 94.1 6.6 0.00023 41.0 22.6 207 54-299 170-384 (420)
101 3azo_A Aminopeptidase; POP fam 94.1 2 7E-05 47.9 19.6 198 52-273 160-377 (662)
102 1sq9_A Antiviral protein SKI8; 94.0 1.7 5.7E-05 44.5 17.4 202 39-268 82-325 (397)
103 2bkl_A Prolyl endopeptidase; m 93.9 1.5 5.2E-05 49.7 18.4 214 37-271 131-357 (695)
104 3mkq_A Coatomer beta'-subunit; 93.9 6.9 0.00023 44.5 23.8 193 37-270 66-264 (814)
105 1pby_B Quinohemoprotein amine 93.9 4.5 0.00015 39.9 19.8 146 53-220 11-168 (337)
106 2qc5_A Streptogramin B lactona 93.9 5.1 0.00017 38.9 23.5 190 37-272 72-266 (300)
107 1pex_A Collagenase-3, MMP-13; 93.8 3.4 0.00012 39.9 18.0 154 32-220 28-197 (207)
108 1r5m_A SIR4-interacting protei 93.8 6.6 0.00023 40.0 23.1 227 37-315 119-360 (425)
109 3dr2_A Exported gluconolactona 93.8 5.2 0.00018 39.9 20.2 205 38-272 57-274 (305)
110 3vl1_A 26S proteasome regulato 93.7 7.1 0.00024 40.1 24.7 230 37-315 108-364 (420)
111 4aez_A CDC20, WD repeat-contai 93.7 2.7 9.2E-05 43.7 18.6 151 87-267 228-382 (401)
112 3ott_A Two-component system se 93.7 2.9 0.0001 47.9 20.3 210 54-299 393-616 (758)
113 3ei3_B DNA damage-binding prot 93.6 2.4 8.1E-05 43.5 17.7 188 39-267 87-284 (383)
114 3e5z_A Putative gluconolactona 93.6 5.2 0.00018 39.4 19.6 192 37-267 79-288 (296)
115 2bkl_A Prolyl endopeptidase; m 93.6 3.5 0.00012 46.8 20.4 257 36-315 78-350 (695)
116 4gqb_B Methylosome protein 50; 93.5 2.8 9.7E-05 43.1 18.1 193 35-270 90-294 (344)
117 1ri6_A Putative isomerase YBHE 93.5 5.8 0.0002 39.2 20.0 162 88-273 141-318 (343)
118 1yr2_A Prolyl oligopeptidase; 93.5 6.3 0.00021 45.0 22.6 258 36-314 117-393 (741)
119 1nir_A Nitrite reductase; hemo 93.5 3.9 0.00013 45.2 20.1 236 53-319 200-461 (543)
120 2ghs_A AGR_C_1268P; regucalcin 93.4 7.5 0.00026 39.3 23.1 206 30-272 51-267 (326)
121 2ynn_A Coatomer subunit beta'; 93.2 7.3 0.00025 38.6 20.4 192 37-268 24-220 (304)
122 3vl1_A 26S proteasome regulato 93.2 7.5 0.00026 39.9 20.8 219 53-316 78-322 (420)
123 1pgu_A Actin interacting prote 93.2 8.1 0.00028 41.9 22.0 240 37-315 77-327 (615)
124 4e54_B DNA damage-binding prot 93.0 0.55 1.9E-05 49.8 11.9 191 37-267 131-329 (435)
125 3pe7_A Oligogalacturonate lyas 93.0 1.6 5.4E-05 44.7 15.2 217 37-273 46-281 (388)
126 3fm0_A Protein CIAO1; WDR39,SG 93.0 3.4 0.00012 42.1 17.5 182 87-299 27-214 (345)
127 4aow_A Guanine nucleotide-bind 93.0 7.4 0.00025 38.4 19.7 188 38-268 98-289 (340)
128 1q7f_A NHL, brain tumor CG1071 92.9 7.5 0.00026 37.8 31.4 235 37-316 40-280 (286)
129 1w6s_A Methanol dehydrogenase 92.7 8 0.00027 43.4 21.4 125 31-170 56-198 (599)
130 3hfq_A Uncharacterized protein 92.7 4.9 0.00017 40.4 18.2 209 37-272 50-279 (347)
131 4a11_B DNA excision repair pro 92.7 5.6 0.00019 40.3 18.8 184 54-266 167-366 (408)
132 4a11_B DNA excision repair pro 92.6 7.4 0.00025 39.4 19.5 234 37-316 111-365 (408)
133 2z2n_A Virginiamycin B lyase; 92.5 8 0.00027 37.4 25.9 225 37-314 25-253 (299)
134 1pgu_A Actin interacting prote 92.5 12 0.00041 40.4 22.2 234 37-315 29-282 (615)
135 4gga_A P55CDC, cell division c 92.5 11 0.00039 39.1 21.3 218 53-315 125-352 (420)
136 1itv_A MMP9; adaptive molecula 92.5 6.5 0.00022 37.4 17.5 153 32-219 11-178 (195)
137 1vyh_C Platelet-activating fac 92.5 6.7 0.00023 41.0 19.4 66 87-168 203-268 (410)
138 1pjx_A Dfpase, DIISOPROPYLFLUO 92.4 8.2 0.00028 37.9 19.1 194 38-266 83-300 (314)
139 1pby_B Quinohemoprotein amine 92.4 9 0.00031 37.6 20.0 111 38-169 46-167 (337)
140 1rwi_B Serine/threonine-protei 92.3 4.2 0.00014 39.1 16.4 185 37-265 77-264 (270)
141 1yiq_A Quinohemoprotein alcoho 92.3 18 0.00063 41.0 27.6 124 32-170 65-199 (689)
142 2vdu_B TRNA (guanine-N(7)-)-me 92.2 6.1 0.00021 41.7 18.9 159 88-269 210-397 (450)
143 2pbi_B Guanine nucleotide-bind 92.2 11 0.00038 38.3 22.9 230 37-315 75-314 (354)
144 1yr2_A Prolyl oligopeptidase; 92.2 5.4 0.00018 45.6 19.6 213 37-271 173-401 (741)
145 2aq5_A Coronin-1A; WD40 repeat 92.2 2.8 9.7E-05 43.4 15.9 199 39-272 145-349 (402)
146 3scy_A Hypothetical bacterial 92.2 11 0.00037 38.1 25.1 73 192-273 224-301 (361)
147 1pex_A Collagenase-3, MMP-13; 92.1 4.6 0.00016 38.9 16.0 153 82-269 28-196 (207)
148 1itv_A MMP9; adaptive molecula 92.1 2 7E-05 41.0 13.4 151 82-267 11-176 (195)
149 2ecf_A Dipeptidyl peptidase IV 92.0 5.3 0.00018 45.0 19.2 153 104-271 264-421 (741)
150 2gop_A Trilobed protease; beta 92.0 10 0.00036 37.8 19.6 184 52-271 84-297 (347)
151 3mmy_A MRNA export factor; mRN 92.0 10 0.00036 37.5 21.2 187 38-266 54-248 (368)
152 2gop_A Trilobed protease; beta 91.9 11 0.00037 37.6 20.3 191 50-272 40-258 (347)
153 3ott_A Two-component system se 91.8 21 0.00072 40.6 24.9 190 37-272 73-267 (758)
154 3odt_A Protein DOA1; ubiquitin 91.8 8.7 0.0003 37.3 18.2 148 87-271 154-302 (313)
155 1nir_A Nitrite reductase; hemo 91.8 7.9 0.00027 42.7 19.7 234 37-316 148-402 (543)
156 2aq5_A Coronin-1A; WD40 repeat 91.8 3.4 0.00012 42.8 15.9 197 37-267 93-301 (402)
157 1gen_A Gelatinase A; hydrolase 91.8 8.6 0.00029 37.3 17.6 153 32-217 35-204 (218)
158 3u4y_A Uncharacterized protein 91.7 11 0.00038 37.2 21.3 194 38-272 52-259 (331)
159 2qc5_A Streptogramin B lactona 91.7 10 0.00034 36.7 26.6 225 37-314 30-258 (300)
160 1w6s_A Methanol dehydrogenase 91.5 16 0.00056 40.9 22.1 126 82-222 57-200 (599)
161 3u4y_A Uncharacterized protein 91.5 11 0.00039 37.1 20.1 193 37-268 9-210 (331)
162 1q7f_A NHL, brain tumor CG1071 91.2 11 0.00039 36.5 25.9 189 37-264 88-279 (286)
163 1jmx_B Amine dehydrogenase; ox 91.2 4.5 0.00015 40.2 15.7 114 38-168 55-178 (349)
164 3fvz_A Peptidyl-glycine alpha- 91.2 14 0.00046 37.3 29.7 235 53-315 69-321 (329)
165 2xbg_A YCF48-like protein; pho 91.1 14 0.00049 37.4 24.4 240 11-298 23-268 (327)
166 3dwl_C Actin-related protein 2 91.1 0.91 3.1E-05 46.4 10.4 152 87-266 22-178 (377)
167 2pm7_B Protein transport prote 91.0 10 0.00035 37.4 18.0 109 37-166 20-133 (297)
168 1kv9_A Type II quinohemoprotei 90.9 25 0.00085 39.7 26.2 124 31-170 60-194 (668)
169 2pm9_A Protein WEB1, protein t 90.7 14 0.00049 37.6 19.4 236 37-316 78-337 (416)
170 3pe7_A Oligogalacturonate lyas 90.7 2.6 8.9E-05 43.1 13.6 202 53-268 168-387 (388)
171 4g56_B MGC81050 protein; prote 90.6 2.2 7.5E-05 43.9 12.9 199 37-267 53-260 (357)
172 4aow_A Guanine nucleotide-bind 90.4 14 0.0005 36.2 19.1 191 38-269 51-250 (340)
173 2p4o_A Hypothetical protein; p 90.2 16 0.00054 36.4 21.9 204 28-271 32-247 (306)
174 2ad6_A Methanol dehydrogenase 90.1 26 0.00091 38.7 29.1 76 205-296 443-523 (571)
175 1su3_A Interstitial collagenas 90.0 16 0.00054 39.6 19.3 158 32-221 267-438 (450)
176 3sfz_A APAF-1, apoptotic pepti 89.7 4.3 0.00015 49.0 16.3 187 37-267 972-1160(1249)
177 1yiq_A Quinohemoprotein alcoho 89.5 32 0.0011 39.0 26.0 120 84-221 67-200 (689)
178 1k32_A Tricorn protease; prote 89.5 33 0.0011 40.7 23.6 199 34-272 210-416 (1045)
179 3ei3_B DNA damage-binding prot 89.5 20 0.00067 36.4 20.5 186 89-316 87-282 (383)
180 2pbi_B Guanine nucleotide-bind 89.4 20 0.00068 36.4 19.7 137 53-217 176-317 (354)
181 2fp8_A Strictosidine synthase; 89.3 19 0.00065 36.0 18.7 205 32-266 84-314 (322)
182 2fp8_A Strictosidine synthase; 89.2 19 0.00066 35.9 21.6 234 53-315 40-312 (322)
183 1qhu_A Protein (hemopexin); be 89.2 17 0.00057 39.5 18.7 224 37-315 107-384 (460)
184 2hes_X YDR267CP; beta-propelle 89.2 6 0.00021 39.9 14.7 151 87-265 164-328 (330)
185 3fvz_A Peptidyl-glycine alpha- 89.1 20 0.00069 36.0 23.0 203 37-264 101-321 (329)
186 3sfz_A APAF-1, apoptotic pepti 89.0 23 0.00078 42.6 22.0 220 37-299 626-860 (1249)
187 3dr2_A Exported gluconolactona 89.0 9.1 0.00031 38.1 15.7 154 53-222 107-274 (305)
188 1got_B GT-beta; complex (GTP-b 89.0 20 0.0007 35.9 26.1 147 87-267 154-303 (340)
189 1erj_A Transcriptional repress 88.8 23 0.0008 36.4 22.6 149 37-216 134-288 (393)
190 1xfd_A DIP, dipeptidyl aminope 88.6 20 0.0007 39.9 20.0 177 37-222 71-296 (723)
191 3dm0_A Maltose-binding peripla 88.6 35 0.0012 38.1 22.5 191 38-268 395-595 (694)
192 2pm9_A Protein WEB1, protein t 88.3 6.4 0.00022 40.3 14.4 152 88-266 178-338 (416)
193 3lrv_A PRE-mRNA-splicing facto 88.0 16 0.00055 36.6 17.1 191 36-267 46-246 (343)
194 1qks_A Cytochrome CD1 nitrite 88.0 23 0.00078 39.3 19.4 243 38-317 209-478 (567)
195 2pm7_B Protein transport prote 87.4 20 0.00069 35.2 17.0 200 38-273 67-294 (297)
196 3jro_A Fusion protein of prote 86.9 4.8 0.00016 46.2 13.5 108 87-216 20-133 (753)
197 3odt_A Protein DOA1; ubiquitin 86.8 23 0.00079 34.1 23.5 187 36-268 27-217 (313)
198 3i2n_A WD repeat-containing pr 86.8 8.9 0.00031 38.0 14.1 190 38-265 31-243 (357)
199 1flg_A Protein (quinoprotein e 86.5 44 0.0015 37.0 25.2 121 32-170 63-200 (582)
200 1erj_A Transcriptional repress 86.5 26 0.0009 36.0 17.9 149 87-266 134-288 (393)
201 3bg1_A Protein SEC13 homolog; 86.4 15 0.0005 36.6 15.5 111 37-169 24-141 (316)
202 3iuj_A Prolyl endopeptidase; h 86.3 20 0.00068 40.5 18.2 197 51-273 206-413 (693)
203 4gqb_B Methylosome protein 50; 86.2 6 0.0002 40.6 12.6 154 84-267 89-248 (344)
204 2hes_X YDR267CP; beta-propelle 86.2 29 0.00099 34.6 19.8 162 34-223 21-192 (330)
205 3c7x_A Matrix metalloproteinas 86.1 7.4 0.00025 37.1 12.2 152 32-217 10-177 (196)
206 3o4h_A Acylamino-acid-releasin 86.1 13 0.00046 40.5 16.2 110 87-219 121-231 (582)
207 3g4e_A Regucalcin; six bladed 85.8 17 0.00058 35.9 15.5 151 87-268 24-185 (297)
208 1qks_A Cytochrome CD1 nitrite 85.8 29 0.00098 38.5 18.7 201 52-270 319-543 (567)
209 4e54_B DNA damage-binding prot 85.8 5 0.00017 42.2 12.0 148 87-266 131-283 (435)
210 3i2n_A WD repeat-containing pr 85.5 12 0.00042 37.0 14.3 105 38-165 129-243 (357)
211 1yfq_A Cell cycle arrest prote 85.5 29 0.00099 34.0 19.9 222 37-301 67-314 (342)
212 3b7f_A Glycosyl hydrolase, BNR 85.1 38 0.0013 35.0 22.8 194 54-273 32-270 (394)
213 3ba0_A Macrophage metalloelast 85.0 14 0.00049 38.7 14.9 156 32-221 185-356 (365)
214 1su3_A Interstitial collagenas 84.8 19 0.00066 38.8 16.1 157 82-270 267-437 (450)
215 2dg1_A DRP35, lactonase; beta 84.4 9.5 0.00032 38.0 12.9 155 87-265 55-213 (333)
216 2xyi_A Probable histone-bindin 84.0 9.7 0.00033 39.9 13.3 145 90-265 196-353 (430)
217 3o4h_A Acylamino-acid-releasin 84.0 14 0.00049 40.3 15.1 179 55-271 134-320 (582)
218 4ggc_A P55CDC, cell division c 83.4 34 0.0011 33.1 24.3 184 54-268 90-276 (318)
219 3c7x_A Matrix metalloproteinas 83.2 20 0.00067 34.1 13.8 152 82-267 10-177 (196)
220 1gen_A Gelatinase A; hydrolase 83.2 34 0.0012 33.0 16.3 153 82-267 35-204 (218)
221 1flg_A Protein (quinoprotein e 83.1 61 0.0021 35.9 22.1 121 82-220 63-200 (582)
222 3ju4_A Endo-N-acetylneuraminid 82.8 53 0.0018 34.9 20.5 185 111-302 268-484 (670)
223 3hrp_A Uncharacterized protein 82.8 50 0.0017 34.6 26.9 202 37-272 141-361 (409)
224 3k26_A Polycomb protein EED; W 82.8 34 0.0012 33.7 16.3 141 104-267 45-194 (366)
225 3dm0_A Maltose-binding peripla 82.2 35 0.0012 38.1 17.7 190 37-269 441-636 (694)
226 2ymu_A WD-40 repeat protein; u 81.9 58 0.002 34.8 20.1 172 87-299 396-569 (577)
227 1yfq_A Cell cycle arrest prote 81.8 41 0.0014 32.9 20.2 185 37-265 22-225 (342)
228 3ba0_A Macrophage metalloelast 81.4 15 0.00052 38.5 13.3 154 82-270 185-355 (365)
229 2ghs_A AGR_C_1268P; regucalcin 81.3 22 0.00076 35.7 14.3 145 88-264 61-209 (326)
230 2oiz_A Aromatic amine dehydrog 81.2 51 0.0018 33.6 22.0 119 38-168 16-143 (361)
231 3iz6_a 40S ribosomal protein R 80.6 53 0.0018 33.4 21.0 184 54-265 181-375 (380)
232 3lrv_A PRE-mRNA-splicing facto 80.5 49 0.0017 33.0 20.3 106 87-217 138-246 (343)
233 3bg1_A Protein SEC13 homolog; 79.7 26 0.00088 34.8 14.1 68 38-117 71-142 (316)
234 3hxj_A Pyrrolo-quinoline quino 79.0 31 0.001 33.9 14.3 137 85-267 105-246 (330)
235 3oyo_A Hemopexin fold protein 78.5 50 0.0017 31.9 15.4 149 36-214 12-197 (225)
236 1xfd_A DIP, dipeptidyl aminope 78.4 22 0.00075 39.7 14.4 108 54-171 38-149 (723)
237 2ynn_A Coatomer subunit beta'; 78.1 54 0.0018 32.1 23.4 192 37-270 66-264 (304)
238 3frx_A Guanine nucleotide-bind 77.0 60 0.0021 32.0 17.2 146 87-267 76-229 (319)
239 1kv9_A Type II quinohemoprotei 76.7 1E+02 0.0035 34.6 30.3 75 206-296 438-517 (668)
240 3v65_B Low-density lipoprotein 76.1 77 0.0026 32.8 24.6 203 53-297 96-305 (386)
241 2hz6_A Endoplasmic reticulum t 75.7 1.6 5.4E-05 45.6 3.5 142 35-220 7-156 (369)
242 3oyo_A Hemopexin fold protein 75.5 61 0.0021 31.3 16.1 61 190-264 127-197 (225)
243 3c75_H MADH, methylamine dehyd 75.5 56 0.0019 34.8 15.8 120 37-169 84-213 (426)
244 1hxn_A Hemopexin, HPX; heme, b 74.9 28 0.00094 33.7 12.0 142 86-264 27-196 (219)
245 3gre_A Serine/threonine-protei 73.7 84 0.0029 32.1 16.8 154 87-267 181-361 (437)
246 3b7f_A Glycosyl hydrolase, BNR 73.6 86 0.0029 32.2 20.2 218 31-273 58-330 (394)
247 2p9w_A MAL S 1 allergenic prot 73.3 30 0.001 35.8 12.4 142 87-249 147-304 (334)
248 1hxn_A Hemopexin, HPX; heme, b 73.2 22 0.00076 34.4 10.8 142 36-214 27-196 (219)
249 1k32_A Tricorn protease; prote 72.9 32 0.0011 40.8 14.4 115 87-222 347-468 (1045)
250 3hxj_A Pyrrolo-quinoline quino 72.7 73 0.0025 31.0 19.8 178 35-270 105-290 (330)
251 3no2_A Uncharacterized protein 72.3 76 0.0026 31.1 20.4 200 33-270 43-259 (276)
252 2xe4_A Oligopeptidase B; hydro 72.0 1E+02 0.0035 35.1 18.0 203 37-263 185-398 (751)
253 2p9w_A MAL S 1 allergenic prot 71.1 99 0.0034 31.9 22.5 227 52-300 34-305 (334)
254 3hrp_A Uncharacterized protein 71.1 1E+02 0.0035 32.1 19.1 154 132-315 135-297 (409)
255 3mmy_A MRNA export factor; mRN 70.7 82 0.0028 30.7 15.1 25 190-219 284-308 (368)
256 3kci_A Probable E3 ubiquitin-p 70.2 66 0.0023 33.3 14.7 19 128-146 167-185 (389)
257 3gre_A Serine/threonine-protei 70.0 97 0.0033 31.6 15.9 153 38-217 182-361 (437)
258 2mad_H Methylamine dehydrogena 69.9 1E+02 0.0036 31.6 27.5 119 38-169 33-160 (373)
259 4hvt_A Ritya.17583.B, post-pro 69.8 1E+02 0.0034 35.2 17.0 199 50-270 153-386 (711)
260 2xe4_A Oligopeptidase B; hydro 69.6 67 0.0023 36.6 15.7 195 53-273 247-466 (751)
261 3ju4_A Endo-N-acetylneuraminid 69.5 1.2E+02 0.0042 32.2 24.3 199 60-264 267-513 (670)
262 2xyi_A Probable histone-bindin 69.3 92 0.0032 32.2 15.7 147 88-265 141-309 (430)
263 3qhy_B Beta-lactamase inhibito 68.9 95 0.0032 30.7 17.5 208 30-299 34-245 (282)
264 3iz6_a 40S ribosomal protein R 68.7 1E+02 0.0035 31.1 25.3 101 190-300 260-365 (380)
265 2ymu_A WD-40 repeat protein; u 67.6 1.3E+02 0.0045 31.9 21.5 147 87-271 355-504 (577)
266 3k6s_A Integrin alpha-X; cell 67.6 1.1E+02 0.0039 36.7 17.5 187 29-218 335-545 (1095)
267 1ck7_A Protein (gelatinase A); 66.9 40 0.0014 38.0 12.5 154 32-216 448-616 (631)
268 3qhy_B Beta-lactamase inhibito 66.6 72 0.0025 31.6 13.4 173 80-299 34-206 (282)
269 4d9s_A UVB-resistance protein 65.8 1.3E+02 0.0045 31.2 21.0 19 128-146 181-199 (406)
270 1jof_A Carboxy-CIS,CIS-muconat 64.8 1.2E+02 0.0041 30.4 17.8 17 206-222 167-184 (365)
271 3f3f_A Nucleoporin SEH1; struc 62.6 1.1E+02 0.0038 29.2 22.2 65 38-114 71-145 (351)
272 1n7d_A LDL receptor, low-densi 62.0 71 0.0024 36.2 13.8 216 53-314 386-612 (699)
273 2xzm_R RACK1; ribosome, transl 61.9 1.3E+02 0.0044 29.8 19.5 64 87-166 87-150 (343)
274 3lp9_A LS-24; SEED albumin, pl 61.6 44 0.0015 32.4 10.3 106 86-216 71-202 (227)
275 1nr0_A Actin interacting prote 60.1 2E+02 0.0067 31.4 23.5 194 40-271 162-361 (611)
276 1npe_A Nidogen, entactin; glyc 59.1 1.2E+02 0.0042 28.7 21.6 218 53-315 10-237 (267)
277 2hz6_A Endoplasmic reticulum t 58.8 4.1 0.00014 42.4 2.4 142 84-270 6-156 (369)
278 4h5i_A Guanine nucleotide-exch 58.4 1.6E+02 0.0054 29.7 20.4 182 53-265 157-343 (365)
279 4h5i_A Guanine nucleotide-exch 57.7 1.6E+02 0.0055 29.6 16.0 142 54-214 198-342 (365)
280 3sre_A PON1, serum paraoxonase 57.0 1.5E+02 0.0051 30.6 14.1 148 102-265 82-252 (355)
281 1z68_A Fibroblast activation p 56.4 89 0.0031 34.7 13.3 202 53-272 90-353 (719)
282 3v64_C Agrin; beta propeller, 55.6 1.8E+02 0.0061 29.5 25.6 203 53-297 53-262 (349)
283 3lp9_A LS-24; SEED albumin, pl 55.4 1.2E+02 0.0041 29.2 12.3 61 190-266 129-202 (227)
284 4d9s_A UVB-resistance protein 55.4 2E+02 0.0067 29.9 20.3 19 129-147 130-148 (406)
285 1z68_A Fibroblast activation p 55.2 2.5E+02 0.0085 31.0 17.0 157 104-272 225-402 (719)
286 4ggc_A P55CDC, cell division c 54.9 1.5E+02 0.005 28.3 20.8 58 53-117 45-103 (318)
287 3f3f_A Nucleoporin SEH1; struc 54.1 1.5E+02 0.0052 28.2 24.7 110 37-167 22-145 (351)
288 1ck7_A Protein (gelatinase A); 52.1 95 0.0032 34.9 12.2 154 82-266 448-616 (631)
289 1n7d_A LDL receptor, low-densi 50.6 2.1E+02 0.007 32.4 15.1 151 86-267 463-616 (699)
290 3p5b_L Low density lipoprotein 50.1 2.4E+02 0.008 29.2 24.1 204 53-297 92-307 (400)
291 3frx_A Guanine nucleotide-bind 49.4 2E+02 0.0067 28.1 20.0 145 37-217 76-229 (319)
292 3sjl_D Methylamine dehydrogena 48.8 2.5E+02 0.0087 29.3 19.8 120 37-169 44-173 (386)
293 1ijq_A LDL receptor, low-densi 48.8 2.1E+02 0.0072 28.3 26.4 216 53-314 10-236 (316)
294 3of7_A Regulator of chromosome 48.8 2.7E+02 0.0092 29.5 20.1 19 129-147 213-231 (473)
295 3of7_A Regulator of chromosome 48.6 2.7E+02 0.0092 29.5 15.7 20 128-147 265-284 (473)
296 4a5s_A Dipeptidyl peptidase 4 48.6 2.7E+02 0.0094 31.1 15.8 200 76-296 16-276 (740)
297 1npe_A Nidogen, entactin; glyc 48.4 1.8E+02 0.0063 27.5 27.4 192 37-270 47-243 (267)
298 2mad_H Methylamine dehydrogena 45.9 1.4E+02 0.0049 30.5 12.0 71 87-169 278-354 (373)
299 2xzm_R RACK1; ribosome, transl 44.9 2.4E+02 0.0081 27.8 17.2 65 136-216 85-150 (343)
300 4hvt_A Ritya.17583.B, post-pro 43.4 2.1E+02 0.0072 32.5 13.7 150 53-223 269-437 (711)
301 2p4o_A Hypothetical protein; p 41.5 2.6E+02 0.0088 27.2 22.3 183 37-248 82-277 (306)
302 3m0c_C LDL receptor, low-densi 40.9 4.7E+02 0.016 30.0 24.9 204 53-297 404-619 (791)
303 2cn3_A Xyloglucanase, beta-1,4 40.0 4.5E+02 0.015 29.6 26.7 260 10-298 8-321 (737)
304 1a12_A RCC1, regulator of chro 35.0 3.9E+02 0.013 27.4 21.3 19 129-147 173-191 (413)
305 2ece_A 462AA long hypothetical 34.8 4.6E+02 0.016 28.1 19.7 171 37-223 95-297 (462)
306 3mvd_K Regulator of chromosome 33.4 4.2E+02 0.014 27.3 21.3 60 80-146 137-205 (423)
307 3tc9_A Hypothetical hydrolase; 32.6 4.5E+02 0.015 27.4 14.2 148 87-265 149-301 (430)
308 3vu4_A KMHSV2; beta-propeller 30.6 4.1E+02 0.014 26.3 23.8 187 38-266 71-272 (355)
309 1a12_A RCC1, regulator of chro 30.6 4.6E+02 0.016 26.9 16.1 19 129-147 241-259 (413)
310 2oaj_A Protein SNI1; WD40 repe 30.6 6.8E+02 0.023 28.8 26.7 195 37-270 28-247 (902)
311 3kci_A Probable E3 ubiquitin-p 30.4 4.5E+02 0.015 26.8 16.9 19 129-147 222-240 (389)
312 2qe8_A Uncharacterized protein 28.6 4.3E+02 0.015 26.0 18.0 193 31-246 70-307 (343)
313 3mvd_K Regulator of chromosome 28.6 5E+02 0.017 26.7 16.2 18 129-146 136-153 (423)
314 3sjl_D Methylamine dehydrogena 27.8 97 0.0033 32.5 6.9 72 87-170 291-368 (386)
315 3m0c_C LDL receptor, low-densi 27.3 7.5E+02 0.026 28.3 22.7 153 82-266 475-633 (791)
316 3k6s_A Integrin alpha-X; cell 27.1 8.7E+02 0.03 29.0 17.8 185 79-268 335-545 (1095)
317 2ece_A 462AA long hypothetical 24.6 6.7E+02 0.023 26.8 22.5 175 87-273 95-297 (462)
318 3v4v_A Integrin alpha-4; cell 21.1 8.6E+02 0.029 26.8 13.8 132 29-163 167-311 (597)
319 3dw8_B Serine/threonine-protei 20.8 6.3E+02 0.022 25.1 14.7 196 37-265 39-315 (447)
320 1jof_A Carboxy-CIS,CIS-muconat 20.2 6.2E+02 0.021 24.9 15.7 16 53-68 167-183 (365)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.4e-42 Score=363.35 Aligned_cols=276 Identities=17% Similarity=0.241 Sum_probs=239.1
Q ss_pred cCCCCCCCcceeEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEccc---
Q 006334 20 VLGFNPPERWGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGT--- 96 (650)
Q Consensus 20 ~~g~~P~~R~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~--- 96 (650)
..+..|++|.+|+++.+++.||+|||. ....++++++||+.+++|+.++.+ |.+|.+|++++++++||||||.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~ 82 (308)
T 1zgk_A 7 HHHSSGLVPRGSHAPKVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADL---QVPRSGLAGCVVGGLLYAVGGRNNS 82 (308)
T ss_dssp --------------CCCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECCEEEE
T ss_pred ccccCCeeeCCccccCCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCCC---CcccccceEEEECCEEEEECCCcCC
Confidence 455678899999999999999999998 556789999999999999999765 8899999999999999999998
Q ss_pred -CCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccC
Q 006334 97 -NGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKG 175 (650)
Q Consensus 97 -~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~ 175 (650)
++...++++++||+.+++|+.+ ..+|.+|..|+++++ +++|||+||... ...++++++||+.+++|+.+.
T Consensus 83 ~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~-~~~iyv~GG~~~--~~~~~~~~~yd~~~~~W~~~~--- 153 (308)
T 1zgk_A 83 PDGNTDSSALDCYNPMTNQWSPC---APMSVPRNRIGVGVI-DGHIYAVGGSHG--CIHHNSVERYEPERDEWHLVA--- 153 (308)
T ss_dssp TTEEEECCCEEEEETTTTEEEEC---CCCSSCCBTCEEEEE-TTEEEEECCEET--TEECCCEEEEETTTTEEEECC---
T ss_pred CCCCeecceEEEECCCCCeEeEC---CCCCcCccccEEEEE-CCEEEEEcCCCC--CcccccEEEECCCCCeEeECC---
Confidence 5556689999999999999997 578899999999988 699999999853 456899999999999999887
Q ss_pred CCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCccc
Q 006334 176 DIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYY 255 (650)
Q Consensus 176 ~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~ 255 (650)
++|.+|..|++++++++||++||.+....++++++||+.+++|+.++ ++|.+|..|++++++++|||+||.+.....
T Consensus 154 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 230 (308)
T 1zgk_A 154 PMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT---AMNTIRSGAGVCVLHNCIYAAGGYDGQDQL 230 (308)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSSBC
T ss_pred CCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC---CCCCccccceEEEECCEEEEEeCCCCCCcc
Confidence 88999999999999999999999887777999999999999999987 788899999999999999999999887788
Q ss_pred CeEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 256 NDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 256 ~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
+++++||+++++|+.+. .+|.+|.+|++++++++|||+||.+. ....+++++||+.
T Consensus 231 ~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~-~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 231 NSVERYDVETETWTFVA---PMKHRRSALGITVHQGRIYVLGGYDG-HTFLDSVECYDPD 286 (308)
T ss_dssp CCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCS-SCBCCEEEEEETT
T ss_pred ceEEEEeCCCCcEEECC---CCCCCccceEEEEECCEEEEEcCcCC-CcccceEEEEcCC
Confidence 99999999999999987 47889999999999999999999864 3467899999986
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=351.66 Aligned_cols=268 Identities=19% Similarity=0.336 Sum_probs=242.0
Q ss_pred CCcCCCeEEeeecCCCCCCCcceeEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEEC
Q 006334 8 NAKRAAMWLYPKVLGFNPPERWGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWG 87 (650)
Q Consensus 8 ~~~~~~~W~~~~~~g~~P~~R~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~ 87 (650)
++..+.+|..+ +..|.+|.+|+++.++++|||+||......++++++||+.+++|+.++.+ |.+|..|++++++
T Consensus 35 ~d~~~~~W~~~---~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~ 108 (302)
T 2xn4_A 35 YDFKEERWHQV---AELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM---RDRRSTLGAAVLN 108 (302)
T ss_dssp EETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEET
T ss_pred EcCcCCcEeEc---ccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCC---CccccceEEEEEC
Confidence 45667889975 36788999999999999999999998777889999999999999999876 7899999999999
Q ss_pred CEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc
Q 006334 88 HKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR 167 (650)
Q Consensus 88 ~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~ 167 (650)
++|||+||.++...++++++||+.+++|+.+ ..+|.+|..|+++++ +++||++||.+......++++++||+.+++
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV---APMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEE---CCCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeec---CCCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 9999999998877889999999999999998 578899999999988 699999999865434568999999999999
Q ss_pred eeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEe
Q 006334 168 WASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIG 247 (650)
Q Consensus 168 Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~G 247 (650)
|+.+. .+|.+|..|++++++++||++||.++....+++++||+.+++|+.+. ++|.+|..|+++.++++|||+|
T Consensus 185 W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~~~~r~~~~~~~~~~~i~v~G 258 (302)
T 2xn4_A 185 WTYIA---EMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA---DMNMCRRNAGVCAVNGLLYVVG 258 (302)
T ss_dssp EEEEC---CCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEC
T ss_pred EEECC---CCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC---CCCCccccCeEEEECCEEEEEC
Confidence 99886 88999999999999999999999988778899999999999999998 7888999999999999999999
Q ss_pred ccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCeE
Q 006334 248 GVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDI 293 (650)
Q Consensus 248 G~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~~l 293 (650)
|.+.....+++++||+++++|+.++. .++.+|.+|++++++++|
T Consensus 259 G~~~~~~~~~v~~yd~~~~~W~~~~~--~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 259 GDDGSCNLASVEYYNPTTDKWTVVSS--CMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEECSS--CCSSCCBSCEEEEEEC--
T ss_pred CcCCCcccccEEEEcCCCCeEEECCc--ccCcccccceEEEecccC
Confidence 99887788999999999999999863 478899999999998765
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=344.48 Aligned_cols=263 Identities=16% Similarity=0.266 Sum_probs=234.4
Q ss_pred EEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCC
Q 006334 33 ACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 33 ~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
.+.+++.||+|||.+. ...+++++||+.+++|..+..+ |.+|.+|+++.++++|||+||.++...++++++||+.+
T Consensus 11 ~~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~ 86 (302)
T 2xn4_A 11 PMNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQVAEL---PSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVK 86 (302)
T ss_dssp ----CEEEEEECCBSS-SBCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTT
T ss_pred ccCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEcccC---CcccccceEEEECCEEEEEeCcCCCccccceEEECCCC
Confidence 4456889999999865 4678999999999999999765 88999999999999999999998888889999999999
Q ss_pred CcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeeecCE
Q 006334 113 KEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANR 192 (650)
Q Consensus 113 ~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~ 192 (650)
++|+.+ ..+|.+|..|+++++ +++|||+||.+. ...++++++||+.+++|+.+. ++|.+|..|+++.++++
T Consensus 87 ~~W~~~---~~~p~~r~~~~~~~~-~~~iyv~GG~~~--~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~ 157 (302)
T 2xn4_A 87 DQWTSV---ANMRDRRSTLGAAVL-NGLLYAVGGFDG--STGLSSVEAYNIKSNEWFHVA---PMNTRRSSVGVGVVGGL 157 (302)
T ss_dssp TEEEEE---CCCSSCCBSCEEEEE-TTEEEEEEEECS--SCEEEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTE
T ss_pred CceeeC---CCCCccccceEEEEE-CCEEEEEcCCCC--CccCceEEEEeCCCCeEeecC---CCCCcccCceEEEECCE
Confidence 999998 578899999999988 699999999853 456899999999999999887 88999999999999999
Q ss_pred EEEEeccCCC--CccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEE
Q 006334 193 LFVYGGDCGD--QYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 193 Iyv~GG~~~~--~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~ 270 (650)
||++||.+.. ..++++++||+.+++|+.+. ++|.+|..|++++++++|||+||.++....+++++||+++++|+.
T Consensus 158 iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 158 LYAVGGYDVASRQCLSTVECYNATTNEWTYIA---EMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp EEEECCEETTTTEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred EEEEeCCCCCCCccccEEEEEeCCCCcEEECC---CCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEee
Confidence 9999997654 35889999999999999997 788999999999999999999999887778999999999999999
Q ss_pred eecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 271 LDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 271 l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
+.. ++.+|.+|+++.++++|||+||.+.. ...+++++||+.
T Consensus 235 ~~~---~~~~r~~~~~~~~~~~i~v~GG~~~~-~~~~~v~~yd~~ 275 (302)
T 2xn4_A 235 VAD---MNMCRRNAGVCAVNGLLYVVGGDDGS-CNLASVEYYNPT 275 (302)
T ss_dssp ECC---CSSCCBSCEEEEETTEEEEECCBCSS-SBCCCEEEEETT
T ss_pred CCC---CCCccccCeEEEECCEEEEECCcCCC-cccccEEEEcCC
Confidence 974 78899999999999999999998643 357889999986
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=344.10 Aligned_cols=262 Identities=18% Similarity=0.303 Sum_probs=237.6
Q ss_pred EECCEEEEEcc-CCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 35 YSHGAVYIFGG-CCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 35 ~~~~~IyvfGG-~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
.+++.||+||| .......+++++||+.+++|..++.+ |.+|.+|+++.++++||||||.++...++++++||+.++
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~ 88 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSI---TRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTAD 88 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCC
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCC---ChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCC
Confidence 36889999999 55567889999999999999999865 779999999999999999999987778899999999999
Q ss_pred c---EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeeec
Q 006334 114 E---WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIA 190 (650)
Q Consensus 114 ~---W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~ 190 (650)
+ |+.+ ..+|.+|..|+++++ +++|||+||... ...++++++||+.+++|+.+. ++|.+|..|+++.++
T Consensus 89 ~~~~W~~~---~~~p~~r~~~~~~~~-~~~lyv~GG~~~--~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~ 159 (301)
T 2vpj_A 89 EDGVWYSV---APMNVRRGLAGATTL-GDMIYVSGGFDG--SRRHTSMERYDPNIDQWSMLG---DMQTAREGAGLVVAS 159 (301)
T ss_dssp TTCCCEEE---CCCSSCCBSCEEEEE-TTEEEEECCBCS--SCBCCEEEEEETTTTEEEEEE---ECSSCCBSCEEEEET
T ss_pred CCCeeEEC---CCCCCCccceeEEEE-CCEEEEEcccCC--CcccceEEEEcCCCCeEEECC---CCCCCcccceEEEEC
Confidence 9 9998 678899999999988 699999999853 446899999999999999987 788999999999999
Q ss_pred CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEE
Q 006334 191 NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 191 ~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~ 270 (650)
++||++||.+....++++++||+.+++|+.+. ++|.+|..|+++.++++|||+||.+.....+++++||+++++|+.
T Consensus 160 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 160 GVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT---PMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CEEEEECCCCCCcccceEEEEeCCCCcEEeCC---CCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 99999999988788999999999999999997 788999999999999999999999887778999999999999999
Q ss_pred eecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 271 LDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 271 l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
+.. +|.+|.+|++++++++|||+||.... ...+++++|++.
T Consensus 237 ~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~-~~~~~v~~yd~~ 277 (301)
T 2vpj_A 237 VTS---MTTPRCYVGATVLRGRLYAIAGYDGN-SLLSSIECYDPI 277 (301)
T ss_dssp ECC---CSSCCBSCEEEEETTEEEEECCBCSS-SBEEEEEEEETT
T ss_pred CCC---CCCcccceeEEEECCEEEEEcCcCCC-cccccEEEEcCC
Confidence 964 78899999999999999999997644 356788999886
No 5
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=345.03 Aligned_cols=257 Identities=18% Similarity=0.345 Sum_probs=233.2
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
.+.||+|||... .+++++||+.+++|+.++.+ |.+|.+|++++++++||||||.+ ...++++++||+.+++|+
T Consensus 11 ~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 11 HDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCP---FEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWY 83 (306)
T ss_dssp CCEEEEEECCSS---TTSEEEEETTTTEEEECCCC---SCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEE
T ss_pred cceEEEEeCCCC---CceEEEecCCCCCEecCCCC---CcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEE
Confidence 489999999765 78999999999999999766 78999999999999999999998 667899999999999999
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEE
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVY 196 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~ 196 (650)
.+ ..+|.+|..|+++++ +++|||+||.+. ....++++++||+.+++|+.+. ++|.+|..|+++.++++||++
T Consensus 84 ~~---~~~p~~r~~~~~~~~-~~~iyv~GG~~~-~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~ 155 (306)
T 3ii7_A 84 SK---LGPPTPRDSLAACAA-EGKIYTSGGSEV-GNSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEANGLIYVC 155 (306)
T ss_dssp EE---ECCSSCCBSCEEEEE-TTEEEEECCBBT-TBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEE
T ss_pred EC---CCCCccccceeEEEE-CCEEEEECCCCC-CCcEeeeEEEEeCCCCceEeCC---CCcCCcceeEEEEECCEEEEE
Confidence 98 568899999999988 699999999852 4567899999999999999876 899999999999999999999
Q ss_pred eccCCCCc----cCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEee
Q 006334 197 GGDCGDQY----HGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLD 272 (650)
Q Consensus 197 GG~~~~~~----~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~ 272 (650)
||...... ++++++||+.+++|+.++ ++|.+|..|++++++++|||+||.+.....+++++||+++++|+.+.
T Consensus 156 GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 156 GGSLGNNVSGRVLNSCEVYDPATETWTELC---PMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp CCEESCTTTCEECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred CCCCCCCCcccccceEEEeCCCCCeEEECC---CccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 99876654 899999999999999998 78899999999999999999999988778899999999999999996
Q ss_pred cCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 273 TCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 273 ~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
. +|.+|.+|++++++++|||+||.+.. ...+++++|++.
T Consensus 233 ~---~p~~r~~~~~~~~~~~i~v~GG~~~~-~~~~~~~~yd~~ 271 (306)
T 3ii7_A 233 P---MPWKGVTVKCAAVGSIVYVLAGFQGV-GRLGHILEYNTE 271 (306)
T ss_dssp C---CSCCBSCCEEEEETTEEEEEECBCSS-SBCCEEEEEETT
T ss_pred C---CCCCccceeEEEECCEEEEEeCcCCC-eeeeeEEEEcCC
Confidence 4 78899999999999999999998644 367899999987
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.6e-40 Score=345.03 Aligned_cols=261 Identities=20% Similarity=0.314 Sum_probs=237.7
Q ss_pred CCcCCCeEEeeecCCCCCCCcceeEEEEECCEEEEEccC----CCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEE
Q 006334 8 NAKRAAMWLYPKVLGFNPPERWGHSACYSHGAVYIFGGC----CGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSA 83 (650)
Q Consensus 8 ~~~~~~~W~~~~~~g~~P~~R~ghs~v~~~~~IyvfGG~----~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa 83 (650)
+++.+.+|..+ +..|.+|.+|+++++++.|||+||. .....++++|+||+.+++|+.++.+ |.+|..|++
T Consensus 44 ~d~~~~~W~~~---~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~ 117 (308)
T 1zgk_A 44 YNPSNGTWLRL---ADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPM---SVPRNRIGV 117 (308)
T ss_dssp EETTTTEEEEC---CCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCC---SSCCBTCEE
T ss_pred EcCCCCeEeEC---CCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCC---CcCccccEE
Confidence 56778899965 4678899999999999999999998 5566789999999999999999876 789999999
Q ss_pred EEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEec
Q 006334 84 ILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDL 163 (650)
Q Consensus 84 ~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~ 163 (650)
++++++|||+||.++...++++++||+.+++|+.+ ..+|.+|..|+++++ +++|||+||.+. ...++++++||+
T Consensus 118 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~-~~~iyv~GG~~~--~~~~~~~~~yd~ 191 (308)
T 1zgk_A 118 GVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLV---APMLTRRIGVGVAVL-NRLLYAVGGFDG--TNRLNSAECYYP 191 (308)
T ss_dssp EEETTEEEEECCEETTEECCCEEEEETTTTEEEEC---CCCSSCCBSCEEEEE-TTEEEEECCBCS--SCBCCCEEEEET
T ss_pred EEECCEEEEEcCCCCCcccccEEEECCCCCeEeEC---CCCCccccceEEEEE-CCEEEEEeCCCC--CCcCceEEEEeC
Confidence 99999999999998877889999999999999997 578899999999988 799999999853 334899999999
Q ss_pred CCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEE
Q 006334 164 KTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKV 243 (650)
Q Consensus 164 ~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~I 243 (650)
.+++|+.+. .+|.+|..|+++.++++||++||.+.....+++++||+.+++|+.+. ++|.+|..|++++++++|
T Consensus 192 ~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i 265 (308)
T 1zgk_A 192 ERNEWRMIT---AMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA---PMKHRRSALGITVHQGRI 265 (308)
T ss_dssp TTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEE
T ss_pred CCCeEeeCC---CCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC---CCCCCccceEEEEECCEE
Confidence 999999887 88999999999999999999999988778999999999999999988 788999999999999999
Q ss_pred EEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE
Q 006334 244 YIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT 289 (650)
Q Consensus 244 yI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~ 289 (650)
||+||.+.....+++++||+++++|+.+.. +|.+|.+|+++++
T Consensus 266 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~l 308 (308)
T 1zgk_A 266 YVLGGYDGHTFLDSVECYDPDTDTWSEVTR---MTSGRSGVGVAVT 308 (308)
T ss_dssp EEECCBCSSCBCCEEEEEETTTTEEEEEEE---CSSCCBSCEEEEC
T ss_pred EEEcCcCCCcccceEEEEcCCCCEEeecCC---CCCCcccceeEeC
Confidence 999999888888999999999999999975 7899999999864
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=343.15 Aligned_cols=264 Identities=19% Similarity=0.280 Sum_probs=238.1
Q ss_pred CCcCCCeEEeeecCCCCCCCcceeEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEEC
Q 006334 8 NAKRAAMWLYPKVLGFNPPERWGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWG 87 (650)
Q Consensus 8 ~~~~~~~W~~~~~~g~~P~~R~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~ 87 (650)
+++.+.+|..+ ...|.+|.+|+++++++.|||+||.. ...++++++||+.+++|+.++.+ |.+|.+|++++++
T Consensus 29 ~d~~~~~W~~~---~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~ 101 (306)
T 3ii7_A 29 FNPKDYSWTDI---RCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGP---PTPRDSLAACAAE 101 (306)
T ss_dssp EETTTTEEEEC---CCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECC---SSCCBSCEEEEET
T ss_pred ecCCCCCEecC---CCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCC---CccccceeEEEEC
Confidence 56788899965 35788999999999999999999988 67789999999999999999876 8899999999999
Q ss_pred CEEEEEcccC-CCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCC--cccceEEEEecC
Q 006334 88 HKMIVFGGTN-GYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEA--NYLNDLHVLDLK 164 (650)
Q Consensus 88 ~~lyVfGG~~-~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~--~~~~dv~~yd~~ 164 (650)
++|||+||.+ +...++++++||+.+++|+.+ ..+|.+|..|+++++ +++|||+||...... ..++++++||+.
T Consensus 102 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~ 177 (306)
T 3ii7_A 102 GKIYTSGGSEVGNSALYLFECYDTRTESWHTK---PSMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPA 177 (306)
T ss_dssp TEEEEECCBBTTBSCCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEEEEETT
T ss_pred CEEEEECCCCCCCcEeeeEEEEeCCCCceEeC---CCCcCCcceeEEEEE-CCEEEEECCCCCCCCcccccceEEEeCCC
Confidence 9999999997 556689999999999999998 678999999999988 699999999853221 238999999999
Q ss_pred CCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEE
Q 006334 165 TMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVY 244 (650)
Q Consensus 165 t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~Iy 244 (650)
+++|+.+. ++|.+|..|+++.++++||++||.+....++++++||+.+++|+.+. ++|.+|..|++++++++||
T Consensus 178 ~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~ 251 (306)
T 3ii7_A 178 TETWTELC---PMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS---PMPWKGVTVKCAAVGSIVY 251 (306)
T ss_dssp TTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC---CCSCCBSCCEEEEETTEEE
T ss_pred CCeEEECC---CccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC---CCCCCccceeEEEECCEEE
Confidence 99999887 89999999999999999999999888778899999999999999997 7889999999999999999
Q ss_pred EEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEECC
Q 006334 245 IIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGS 291 (650)
Q Consensus 245 I~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~ 291 (650)
|+||.+.....+++++||+++++|+.+.. ++.+|.+|+++++.+
T Consensus 252 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 252 VLAGFQGVGRLGHILEYNTETDKWVANSK---VRAFPVTSCLICVVD 295 (306)
T ss_dssp EEECBCSSSBCCEEEEEETTTTEEEEEEE---EECCSCTTCEEEEEE
T ss_pred EEeCcCCCeeeeeEEEEcCCCCeEEeCCC---cccccceeEEEEECC
Confidence 99999888888999999999999999975 678899999888754
No 8
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=349.50 Aligned_cols=271 Identities=18% Similarity=0.263 Sum_probs=238.9
Q ss_pred CCCcCCCeEEeeecCCCCCCCcceeEEEEECCEEEEEccCC------CCcccceEEEEECCCCcEEEeecCCCCCCCCcc
Q 006334 7 ENAKRAAMWLYPKVLGFNPPERWGHSACYSHGAVYIFGGCC------GGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDS 80 (650)
Q Consensus 7 ~~~~~~~~W~~~~~~g~~P~~R~ghs~v~~~~~IyvfGG~~------~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~ 80 (650)
.+++.+.+|.. .....|.+|.+|++++++++|||+||.. .....+++|+||+.+++|+.++.+ |.+|.+
T Consensus 17 ~yd~~~~~W~~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~ 91 (315)
T 4asc_A 17 AYDPAANECYC--ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL---PSPRCL 91 (315)
T ss_dssp EEETTTTEEEE--EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB---SSCEES
T ss_pred EECCCCCeEec--CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC---Ccchhc
Confidence 35778899985 3334477999999999999999999962 233456799999999999999776 889999
Q ss_pred eEEEEECCEEEEEcccC---CCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccce
Q 006334 81 HSAILWGHKMIVFGGTN---GYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLND 157 (650)
Q Consensus 81 hsa~~~~~~lyVfGG~~---~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~d 157 (650)
|++++++++|||+||.+ +...++++++||+.+++|+.+ ..+|.+|..|+++++ +++|||+||.. .....+++
T Consensus 92 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~ 166 (315)
T 4asc_A 92 FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGES---DPLPYVVYGHTVLSH-MDLVYVIGGKG-SDRKCLNK 166 (315)
T ss_dssp CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEEC---CCCSSCCBSCEEEEE-TTEEEEECCBC-TTSCBCCC
T ss_pred eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeEC---CCCCCcccceeEEEE-CCEEEEEeCCC-CCCcccce
Confidence 99999999999999975 356689999999999999997 578899999999987 69999999984 34567899
Q ss_pred EEEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEE
Q 006334 158 LHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAI 237 (650)
Q Consensus 158 v~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v 237 (650)
+++||+.+++|+.+. ++|.+|..|+++.++++||++||.+....++++++||+.+++|+.+. ++|.+|..|+++
T Consensus 167 ~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~ 240 (315)
T 4asc_A 167 MCVYDPKKFEWKELA---PMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE---AFPQERSSLSLV 240 (315)
T ss_dssp EEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC---CCSSCCBSCEEE
T ss_pred EEEEeCCCCeEEECC---CCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECC---CCCCcccceeEE
Confidence 999999999999887 88999999999999999999999988788899999999999999997 788999999999
Q ss_pred EECCEEEEEeccCCC---------cccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCeEEEEcC
Q 006334 238 NIGTKVYIIGGVGDK---------HYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGG 298 (650)
Q Consensus 238 ~~~~~IyI~GG~~~~---------~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG 298 (650)
.++++|||+||.+.. ..++++|+||+++++|+.+ .+.+|..|++++++++|||+..
T Consensus 241 ~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 241 SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV-----LREIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE-----ESCSSCCSSCEEEEEEECGGGS
T ss_pred EECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh-----ccCCcCccceEEeCCEEEEEEe
Confidence 999999999998531 4578999999999999999 4667999999999999999965
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=338.61 Aligned_cols=262 Identities=18% Similarity=0.315 Sum_probs=238.4
Q ss_pred CCcCCCeEEeeecCCCCCCCcceeEEEEECCEEEEEccCCCCcccceEEEEECCCCc---EEEeecCCCCCCCCcceEEE
Q 006334 8 NAKRAAMWLYPKVLGFNPPERWGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMV---WSTLATTGQGPGPRDSHSAI 84 (650)
Q Consensus 8 ~~~~~~~W~~~~~~g~~P~~R~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~s---W~~l~~~g~~P~pR~~hsa~ 84 (650)
++..+.+|..+. ..|.+|.+|+++.+++.||||||..+....+++++||+.+++ |+.++.+ |.+|..|+++
T Consensus 36 ~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~---p~~r~~~~~~ 109 (301)
T 2vpj_A 36 YDPKTQEWSFLP---SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM---NVRRGLAGAT 109 (301)
T ss_dssp EETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC---SSCCBSCEEE
T ss_pred EcCCCCeEEeCC---CCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC---CCCccceeEE
Confidence 466778999654 467899999999999999999999877788999999999999 9999766 7899999999
Q ss_pred EECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecC
Q 006334 85 LWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLK 164 (650)
Q Consensus 85 ~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~ 164 (650)
+++++|||+||.++...++++++||+.+++|+.+ ..+|.+|..|+++++ +++||++||.+. ...++++++||+.
T Consensus 110 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~-~~~iyv~GG~~~--~~~~~~~~~~d~~ 183 (301)
T 2vpj_A 110 TLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSML---GDMQTAREGAGLVVA-SGVIYCLGGYDG--LNILNSVEKYDPH 183 (301)
T ss_dssp EETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE---EECSSCCBSCEEEEE-TTEEEEECCBCS--SCBCCCEEEEETT
T ss_pred EECCEEEEEcccCCCcccceEEEEcCCCCeEEEC---CCCCCCcccceEEEE-CCEEEEECCCCC--CcccceEEEEeCC
Confidence 9999999999998877789999999999999998 467899999999988 799999999853 3478999999999
Q ss_pred CCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEE
Q 006334 165 TMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVY 244 (650)
Q Consensus 165 t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~Iy 244 (650)
+++|+.+. ++|.+|..|+++.++++||++||.+.....+++++||+.+++|+.+. .+|.+|..|++++++++||
T Consensus 184 ~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~ 257 (301)
T 2vpj_A 184 TGHWTNVT---PMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT---SMTTPRCYVGATVLRGRLY 257 (301)
T ss_dssp TTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEE
T ss_pred CCcEEeCC---CCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC---CCCCcccceeEEEECCEEE
Confidence 99999886 88999999999999999999999888777899999999999999997 7889999999999999999
Q ss_pred EEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEEC
Q 006334 245 IIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTG 290 (650)
Q Consensus 245 I~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~ 290 (650)
|+||.+.....+++++||+++++|+.+.. +|.+|++|+++++.
T Consensus 258 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 258 AIAGYDGNSLLSSIECYDPIIDSWEVVTS---MGTQRCDAGVCVLR 300 (301)
T ss_dssp EECCBCSSSBEEEEEEEETTTTEEEEEEE---EEEEEESCEEEEEE
T ss_pred EEcCcCCCcccccEEEEcCCCCeEEEcCC---CCcccccceEEEeC
Confidence 99999877778999999999999999975 78899999998874
No 10
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-40 Score=347.96 Aligned_cols=271 Identities=16% Similarity=0.275 Sum_probs=237.6
Q ss_pred CCCcCCCeEEeeecCCCCCCCcceeEEEEECCEEEEEccCCC------CcccceEEEEECCCCcEEEeecCCCCCCCCcc
Q 006334 7 ENAKRAAMWLYPKVLGFNPPERWGHSACYSHGAVYIFGGCCG------GLHFGDVLMLNLDTMVWSTLATTGQGPGPRDS 80 (650)
Q Consensus 7 ~~~~~~~~W~~~~~~g~~P~~R~ghs~v~~~~~IyvfGG~~~------~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~ 80 (650)
.+++.+.+|...+ ...|.+|.+|+++++++.|||+||... ....+++++||+.+++|..++.+ |.+|..
T Consensus 28 ~yd~~~~~W~~~~--~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~ 102 (318)
T 2woz_A 28 AYDPMENECYLTA--LAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL---PSARCL 102 (318)
T ss_dssp EEETTTTEEEEEE--ECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCB---SSCBCS
T ss_pred EECCCCCceeccc--CCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCC---Cccccc
Confidence 3567888999733 345678999999999999999999631 12345699999999999999776 889999
Q ss_pred eEEEEECCEEEEEcccC--CCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceE
Q 006334 81 HSAILWGHKMIVFGGTN--GYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDL 158 (650)
Q Consensus 81 hsa~~~~~~lyVfGG~~--~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv 158 (650)
|++++++++|||+||.+ +...++++++||+.+++|+.+ ..+|.+|..|+++++ +++|||+||... ....++++
T Consensus 103 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~-~~~iyv~GG~~~-~~~~~~~~ 177 (318)
T 2woz_A 103 FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV---KNLPIKVYGHNVISH-NGMIYCLGGKTD-DKKCTNRV 177 (318)
T ss_dssp CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE---CCCSSCEESCEEEEE-TTEEEEECCEES-SSCBCCCE
T ss_pred cceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeEC---CCCCCcccccEEEEE-CCEEEEEcCCCC-CCCccceE
Confidence 99999999999999986 445689999999999999998 578899999999987 799999999843 35578999
Q ss_pred EEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE
Q 006334 159 HVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN 238 (650)
Q Consensus 159 ~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~ 238 (650)
++||+.+++|+.+. ++|.+|..|++++++++||++||.+.....+++++||+.+++|+.+. ++|.+|..|++++
T Consensus 178 ~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~ 251 (318)
T 2woz_A 178 FIYNPKKGDWKDLA---PMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT---EFPQERSSISLVS 251 (318)
T ss_dssp EEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC---CCSSCCBSCEEEE
T ss_pred EEEcCCCCEEEECC---CCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECC---CCCCcccceEEEE
Confidence 99999999999887 88999999999999999999999888778899999999999999987 7888999999999
Q ss_pred ECCEEEEEeccCC---------CcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCeEEEEcC
Q 006334 239 IGTKVYIIGGVGD---------KHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGG 298 (650)
Q Consensus 239 ~~~~IyI~GG~~~---------~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG 298 (650)
++++|||+||.+. ....+++|+||+++++|+.+ ++.+|++|++++++++|||+.-
T Consensus 252 ~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 252 LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM-----LKEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE-----ESCCGGGTTCEEEEEEEEGGGC
T ss_pred ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh-----cccccccccceeeCCEEEEEEe
Confidence 9999999999864 24578999999999999998 4778999999999999999843
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.2e-39 Score=347.30 Aligned_cols=278 Identities=21% Similarity=0.324 Sum_probs=227.5
Q ss_pred CCCCCCcceeEEEEECCEEEEEccCCCCcccceEEEEECC--CCcEEEeecCCCCC-CCCcceEEEEECCEEEEEccc-C
Q 006334 22 GFNPPERWGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLD--TMVWSTLATTGQGP-GPRDSHSAILWGHKMIVFGGT-N 97 (650)
Q Consensus 22 g~~P~~R~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~--t~sW~~l~~~g~~P-~pR~~hsa~~~~~~lyVfGG~-~ 97 (650)
...|.+|.+|++++++++|||+||... +++|+||+. +++|+.++.+ | .+|.+|++++++++||||||. +
T Consensus 4 ~~lP~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~---p~~~R~~~~~~~~~~~lyv~GG~~~ 76 (357)
T 2uvk_A 4 PETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAF---PGGPRDQATSAFIDGNLYVFGGIGK 76 (357)
T ss_dssp CCCSSCCCSCEEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCCC---TTCCCBSCEEEEETTEEEEECCEEE
T ss_pred CCCCccccceEEEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCCC---CCCcCccceEEEECCEEEEEcCCCC
Confidence 456889999999999999999999754 589999998 4899999876 6 789999999999999999998 3
Q ss_pred ----CCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCC----------------------
Q 006334 98 ----GYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGE---------------------- 151 (650)
Q Consensus 98 ----~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~---------------------- 151 (650)
....++++|+||+.+++|+++... +|.+|..|+++++ +++|||+||.+...
T Consensus 77 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~--~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
T 2uvk_A 77 NSEGLTQVFNDVHKYNPKTNSWVKLMSH--APMGMAGHVTFVH-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKIN 153 (357)
T ss_dssp CTTSCEEECCCEEEEETTTTEEEECSCC--CSSCCSSEEEEEE-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCccceeeccEEEEeCCCCcEEECCCC--CCcccccceEEEE-CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhh
Confidence 234589999999999999998332 2589999999886 79999999984210
Q ss_pred ----------CcccceEEEEecCCCceeeccccCCCCCCCCc-ceeeeecCEEEEEeccCCC-CccCeEEEEEC--CCCc
Q 006334 152 ----------ANYLNDLHVLDLKTMRWASPAVKGDIPVPRDS-HSSNVIANRLFVYGGDCGD-QYHGDIDMLDM--NSLT 217 (650)
Q Consensus 152 ----------~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~-hs~v~~~~~Iyv~GG~~~~-~~~n~v~~yd~--~t~~ 217 (650)
...++++++||+.+++|+.+. ++|.+|.. |++++++++||++||.+.. ...+++++||+ .+++
T Consensus 154 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~ 230 (357)
T 2uvk_A 154 AHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG---ESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLK 230 (357)
T ss_dssp HHHHSSCGGGGCCCCEEEEEETTTTEEEEEE---ECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CE
T ss_pred hhhccccccccCCcccEEEEeCCCCcEEECC---CCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCc
Confidence 024689999999999999886 77876554 9999999999999997543 45789999987 8999
Q ss_pred EEEeeecCCCCCcccceEEEEECCEEEEEeccCCC-----------------cccCeEEEEECCCCcEEEeecCCCCCCC
Q 006334 218 WSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDK-----------------HYYNDIWILNVSTCSWSQLDTCGQQPQG 280 (650)
Q Consensus 218 W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~-----------------~~~~dv~~yD~~t~~W~~l~~~~~~p~~ 280 (650)
|+.+... +.|..|..|++++++++|||+||.+.. ..+.++++||+++++|+.+.. +|.+
T Consensus 231 W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~ 306 (357)
T 2uvk_A 231 WNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE---LSQG 306 (357)
T ss_dssp EEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE---CSSC
T ss_pred EEecCCC-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC---CCCC
Confidence 9999743 335557789999999999999997432 234689999999999999975 7889
Q ss_pred cceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecCC
Q 006334 281 RFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLGA 316 (650)
Q Consensus 281 R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~~ 316 (650)
|.+|+++.++++||||||.+.++..++++++++++.
T Consensus 307 r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 307 RAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKD 342 (357)
T ss_dssp CBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-C
T ss_pred cccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcC
Confidence 999999999999999999987776789999999973
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=337.03 Aligned_cols=258 Identities=16% Similarity=0.254 Sum_probs=225.5
Q ss_pred ECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccC----C--CcCcCeEEEEE
Q 006334 36 SHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTN----G--YKKVNDLHILD 109 (650)
Q Consensus 36 ~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~----~--~~~~ndv~~yD 109 (650)
+++.||++|| +++++||+.+++|.. ..+.. |.+|.+|++++++++|||+||.. . ....+++++||
T Consensus 3 ~~~~l~~~GG-------~~~~~yd~~~~~W~~-~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d 73 (315)
T 4asc_A 3 LQDLIFMISE-------EGAVAYDPAANECYC-ASLSS-QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFD 73 (315)
T ss_dssp CEEEEEEEET-------TEEEEEETTTTEEEE-EECCC-CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEE
T ss_pred cceEEEEEcC-------CceEEECCCCCeEec-CCCCC-CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEec
Confidence 3568999999 689999999999987 44422 67899999999999999999962 1 22357799999
Q ss_pred CCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccC-CCCcccceEEEEecCCCceeeccccCCCCCCCCcceeee
Q 006334 110 LESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGE-GEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNV 188 (650)
Q Consensus 110 ~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~-~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~ 188 (650)
+.+++|+.+ ..+|.+|..|+++++ +++|||+||... .....++++++||+.+++|+.+. ++|.+|..|+++.
T Consensus 74 ~~~~~W~~~---~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~ 146 (315)
T 4asc_A 74 HLDSEWLGM---PPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD---PLPYVVYGHTVLS 146 (315)
T ss_dssp TTTTEEEEC---CCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEE
T ss_pred CCCCeEEEC---CCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC---CCCCcccceeEEE
Confidence 999999997 578899999999988 699999999753 23567899999999999999887 8999999999999
Q ss_pred ecCEEEEEecc-CCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 189 IANRLFVYGGD-CGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 189 ~~~~Iyv~GG~-~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
++++||++||. .....++++++||+.+++|+.++ ++|.+|..|++++++++|||+||.+.....+++++||+++++
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA---PMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECC---CCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 99999999998 56678899999999999999987 788999999999999999999999887788999999999999
Q ss_pred EEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCC----C----CCCCcEEEEecC
Q 006334 268 WSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGED----E----RPLNELLVLQLG 315 (650)
Q Consensus 268 W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~----~----~~~~d~~~l~l~ 315 (650)
|+.+.. +|.+|.+|++++++++|||+||.... . ...+++++||+.
T Consensus 224 W~~~~~---~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~ 276 (315)
T 4asc_A 224 WAPFEA---FPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEE 276 (315)
T ss_dssp EEEECC---CSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT
T ss_pred EEECCC---CCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCC
Confidence 999964 78899999999999999999997531 1 245788888886
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4.1e-38 Score=330.56 Aligned_cols=265 Identities=18% Similarity=0.237 Sum_probs=228.0
Q ss_pred CCcceeEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCC--C----
Q 006334 26 PERWGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNG--Y---- 99 (650)
Q Consensus 26 ~~R~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~--~---- 99 (650)
.+|.++.. ++.||+|||. ++++||+.+++|...+ +. .|.+|.+|+++..+++||||||... .
T Consensus 7 ~~r~~~~~---~~~i~~~GG~-------~~~~yd~~~~~W~~~~-~~-~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 74 (318)
T 2woz_A 7 IPRHGMFV---KDLILLVNDT-------AAVAYDPMENECYLTA-LA-EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQ 74 (318)
T ss_dssp SCCCCCSE---EEEEEEECSS-------EEEEEETTTTEEEEEE-EC-TTSCSSEEEEECSSSCEEEEESSCC-------
T ss_pred ccccccee---cchhhhcccc-------ceEEECCCCCceeccc-CC-ccCCccceEEEEECCEEEEECCcccCccccCC
Confidence 45555433 4689999993 5899999999999843 32 2578999999999999999999631 1
Q ss_pred cCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCC
Q 006334 100 KKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPV 179 (650)
Q Consensus 100 ~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~ 179 (650)
...+++++||+.+++|+.+ ..+|.+|..|+++++ +++|||+||........++++++||+.+++|+.+. ++|.
T Consensus 75 ~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~ 147 (318)
T 2woz_A 75 PLQSYFFQLDNVSSEWVGL---PPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK---NLPI 147 (318)
T ss_dssp CCCBEEEEEETTTTEEEEC---SCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC---CCSS
T ss_pred CccccEEEEeCCCCcEEEC---CCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC---CCCC
Confidence 2245699999999999997 578899999999988 69999999986445667899999999999999887 8999
Q ss_pred CCCcceeeeecCEEEEEeccC-CCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeE
Q 006334 180 PRDSHSSNVIANRLFVYGGDC-GDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDI 258 (650)
Q Consensus 180 ~R~~hs~v~~~~~Iyv~GG~~-~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv 258 (650)
+|..|++++++++||++||.. ....++++++||+.+++|+.++ ++|.+|..|++++++++|||+||.......+++
T Consensus 148 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 224 (318)
T 2woz_A 148 KVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASV 224 (318)
T ss_dssp CEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEEEEETTEEEEEE
T ss_pred cccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECC---CCCCCcccceEEEECCEEEEEcCcCCCCccceE
Confidence 999999999999999999974 4567899999999999999997 788999999999999999999999887788999
Q ss_pred EEEECCCCcEEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCC--------CCCCCcEEEEecC
Q 006334 259 WILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGED--------ERPLNELLVLQLG 315 (650)
Q Consensus 259 ~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~--------~~~~~d~~~l~l~ 315 (650)
++||+++++|+.+.. +|.+|.+|++++++++|||+||.... ....+++++||+.
T Consensus 225 ~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~ 286 (318)
T 2woz_A 225 EAFDLKTNKWEVMTE---FPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD 286 (318)
T ss_dssp EEEETTTCCEEECCC---CSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETT
T ss_pred EEEECCCCeEEECCC---CCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCC
Confidence 999999999999864 78899999999999999999998643 1346889999986
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.4e-36 Score=351.22 Aligned_cols=282 Identities=17% Similarity=0.209 Sum_probs=233.2
Q ss_pred CCCCCCcceeEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEee-c--CCCCCCCCcceEEEEE--CCEEEEEccc
Q 006334 22 GFNPPERWGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLA-T--TGQGPGPRDSHSAILW--GHKMIVFGGT 96 (650)
Q Consensus 22 g~~P~~R~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~-~--~g~~P~pR~~hsa~~~--~~~lyVfGG~ 96 (650)
...|+.|++|+++ +++.||||||... ..++++|+||+.+++|+.++ . .+..|.+|.+|+++++ +++|||+||.
T Consensus 383 ~~~p~rr~g~~~~-~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~ 460 (695)
T 2zwa_A 383 ECPINRKFGDVDV-AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGR 460 (695)
T ss_dssp CCTTCCBSCEEEE-CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCB
T ss_pred CCCCCCceeEEEE-ECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCC
Confidence 4567778877655 8999999999877 78899999999999999998 4 2345889999999999 9999999999
Q ss_pred CCCc-CcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccC
Q 006334 97 NGYK-KVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKG 175 (650)
Q Consensus 97 ~~~~-~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~ 175 (650)
+... .++++|+||+.+++|+.+ ..+|.+|+.|+++++.+++|||+||.+... ++++||+.+++|+.+...+
T Consensus 461 ~~~~~~~~dv~~yd~~t~~W~~~---~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-----~v~~yd~~t~~W~~~~~~g 532 (695)
T 2zwa_A 461 KAPHQGLSDNWIFDMKTREWSMI---KSLSHTRFRHSACSLPDGNVLILGGVTEGP-----AMLLYNVTEEIFKDVTPKD 532 (695)
T ss_dssp SSTTCBCCCCEEEETTTTEEEEC---CCCSBCCBSCEEEECTTSCEEEECCBCSSC-----SEEEEETTTTEEEECCCSS
T ss_pred CCCCCccccEEEEeCCCCcEEEC---CCCCCCcccceEEEEcCCEEEEECCCCCCC-----CEEEEECCCCceEEccCCC
Confidence 8755 689999999999999998 678999999999987679999999985322 8999999999999988666
Q ss_pred CCCCCCCcceeeeec---CEEEEEeccCCC--CccCeEEEEECCCCc------EEEeeecCCCCCcccceEEEEEC-CEE
Q 006334 176 DIPVPRDSHSSNVIA---NRLFVYGGDCGD--QYHGDIDMLDMNSLT------WSRLAIIGSSPGVRAGHAAINIG-TKV 243 (650)
Q Consensus 176 ~lP~~R~~hs~v~~~---~~Iyv~GG~~~~--~~~n~v~~yd~~t~~------W~~i~~~g~~P~~R~~~s~v~~~-~~I 243 (650)
.+|.+|..|++++++ ++||++||.... ..++++++||+.+++ |+.+.. .++.+|.+|++++++ ++|
T Consensus 533 ~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~~~R~~~~~~~~~~~~i 610 (695)
T 2zwa_A 533 EFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ--HPLFQRYGSQIKYITPRKL 610 (695)
T ss_dssp GGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE--CGGGCCBSCEEEEEETTEE
T ss_pred CCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC--CCCCCcccceEEEeCCCEE
Confidence 689999999988877 899999997543 678999999999999 899874 235789999999999 999
Q ss_pred EEEeccCCC---cccCeEEEEECCCCcEEEeecCCC----CCCCcceeEEEEECC-eEEEEcCCCC---CCCCCCcEEEE
Q 006334 244 YIIGGVGDK---HYYNDIWILNVSTCSWSQLDTCGQ----QPQGRFSHAAVVTGS-DIVIYGGCGE---DERPLNELLVL 312 (650)
Q Consensus 244 yI~GG~~~~---~~~~dv~~yD~~t~~W~~l~~~~~----~p~~R~~hsav~~~~-~lyV~GG~~~---~~~~~~d~~~l 312 (650)
||+||.+.. ...+++++||+.+++|+.+..... .+..+.+|+++.+++ +|||+||... .+...+++|.+
T Consensus 611 yv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~l 690 (695)
T 2zwa_A 611 LIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKL 690 (695)
T ss_dssp EEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEE
T ss_pred EEECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEE
Confidence 999998754 368899999999999997643211 122577899998876 9999999532 23334577777
Q ss_pred ecC
Q 006334 313 QLG 315 (650)
Q Consensus 313 ~l~ 315 (650)
++.
T Consensus 691 dl~ 693 (695)
T 2zwa_A 691 IAI 693 (695)
T ss_dssp EEC
T ss_pred EEE
Confidence 664
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4.7e-34 Score=304.00 Aligned_cols=246 Identities=20% Similarity=0.262 Sum_probs=200.2
Q ss_pred CCeEEeeecCCCCC-CCcceeEEEEECCEEEEEccC-C----CCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE
Q 006334 12 AAMWLYPKVLGFNP-PERWGHSACYSHGAVYIFGGC-C----GGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL 85 (650)
Q Consensus 12 ~~~W~~~~~~g~~P-~~R~ghs~v~~~~~IyvfGG~-~----~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~ 85 (650)
+.+|..+. ..| .+|.+|++++++++||||||. . ....++++|+||+.+++|+.++.+. |.+|.+|++++
T Consensus 42 ~~~W~~~~---~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~--p~~r~~~~~~~ 116 (357)
T 2uvk_A 42 DKKWTALA---AFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA--PMGMAGHVTFV 116 (357)
T ss_dssp SCCEEECC---CCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC--SSCCSSEEEEE
T ss_pred CCCeeECC---CCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC--CcccccceEEE
Confidence 57899543 356 799999999999999999998 3 2456899999999999999998874 58999999999
Q ss_pred ECCEEEEEcccCCCc----------------------------------CcCeEEEEECCCCcEEeeecCCCCCCCCcc-
Q 006334 86 WGHKMIVFGGTNGYK----------------------------------KVNDLHILDLESKEWMRPECRGAPPSPRES- 130 (650)
Q Consensus 86 ~~~~lyVfGG~~~~~----------------------------------~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~- 130 (650)
.+++|||+||.+... .++++++||+.+++|+.+ ..+|.+|..
T Consensus 117 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~---~~~p~~~~~~ 193 (357)
T 2uvk_A 117 HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA---GESPWYGTAG 193 (357)
T ss_dssp ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE---EECSSCCCBS
T ss_pred ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEEC---CCCCCCCccc
Confidence 999999999986532 468999999999999998 456665555
Q ss_pred cEEEEEcCCEEEEEccccCCCCcccceEEEEec--CCCceeeccccCCCCCC--CCcceeeeecCEEEEEeccCC-----
Q 006334 131 HTATLVGDDKMVIFGGSGEGEANYLNDLHVLDL--KTMRWASPAVKGDIPVP--RDSHSSNVIANRLFVYGGDCG----- 201 (650)
Q Consensus 131 hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~--~t~~Wt~i~~~~~lP~~--R~~hs~v~~~~~Iyv~GG~~~----- 201 (650)
|+++++ +++|||+||... .....+++++||+ .+++|+.+. .+|.+ |..|+++.++++|||+||.+.
T Consensus 194 ~~~~~~-~~~iyv~GG~~~-~~~~~~~v~~~d~d~~~~~W~~~~---~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 268 (357)
T 2uvk_A 194 AAVVNK-GDKTWLINGEAK-PGLRTDAVFELDFTGNNLKWNKLA---PVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRE 268 (357)
T ss_dssp CEEEEE-TTEEEEECCEEE-TTEECCCEEEEECC---CEEEECC---CSSTTTCCBSCEEEEETTEEEEECCEECTTHHH
T ss_pred ccEEEE-CCEEEEEeeecC-CCcccCceEEEEecCCCCcEEecC---CCCCCcccccceEEEECCEEEEEcCccccCCcc
Confidence 888777 799999999853 2356789999987 899999886 55544 667889999999999999642
Q ss_pred ------------CCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCC-cccCeEEEEECCCCcE
Q 006334 202 ------------DQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDK-HYYNDIWILNVSTCSW 268 (650)
Q Consensus 202 ------------~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~-~~~~dv~~yD~~t~~W 268 (650)
...++++++||+.+++|+.+. .+|.+|..|+++.++++|||+||.+.. ..++++++|++++++|
T Consensus 269 ~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 269 NYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG---ELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp HHHTTCSSTTTTCCCEECCEEEECC---CEEEE---ECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred cccccceeccccccceeeEEEEecCCCceeeCC---CCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 223468999999999999997 688899999999999999999999754 4579999999999999
Q ss_pred EEeec
Q 006334 269 SQLDT 273 (650)
Q Consensus 269 ~~l~~ 273 (650)
..+..
T Consensus 346 ~~~~~ 350 (357)
T 2uvk_A 346 TVQNL 350 (357)
T ss_dssp EEEC-
T ss_pred Eeeec
Confidence 99864
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=2.1e-30 Score=301.23 Aligned_cols=233 Identities=15% Similarity=0.210 Sum_probs=200.2
Q ss_pred CCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeee-c--CCCCCCCCcccEEEEEc-CCEEEEEcccc
Q 006334 73 QGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPE-C--RGAPPSPRESHTATLVG-DDKMVIFGGSG 148 (650)
Q Consensus 73 ~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~-~--~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~ 148 (650)
..|.+|++++++ ++++||||||.+. ..++++|+||+.+++|+.+. . .+.+|.+|.+|+++++. +++|||+||.+
T Consensus 384 ~~p~rr~g~~~~-~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~ 461 (695)
T 2zwa_A 384 CPINRKFGDVDV-AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRK 461 (695)
T ss_dssp CTTCCBSCEEEE-CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBS
T ss_pred CCCCCceeEEEE-ECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCC
Confidence 336677776554 8999999999988 77899999999999999986 2 24589999999999995 69999999985
Q ss_pred CCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCC
Q 006334 149 EGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSS 227 (650)
Q Consensus 149 ~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~ 227 (650)
. ....++++|+||+.+++|+.+. ++|.+|+.|+++++ +++|||+||.+... ++++||+.+++|+.+...+.+
T Consensus 462 ~-~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~ 534 (695)
T 2zwa_A 462 A-PHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEF 534 (695)
T ss_dssp S-TTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGG
T ss_pred C-CCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCC
Confidence 3 3347899999999999999886 89999999999996 99999999987655 999999999999999976668
Q ss_pred CCcccceEEEEEC---CEEEEEeccCC--CcccCeEEEEECCCCc------EEEeecCCCCCCCcceeEEEEEC-CeEEE
Q 006334 228 PGVRAGHAAINIG---TKVYIIGGVGD--KHYYNDIWILNVSTCS------WSQLDTCGQQPQGRFSHAAVVTG-SDIVI 295 (650)
Q Consensus 228 P~~R~~~s~v~~~---~~IyI~GG~~~--~~~~~dv~~yD~~t~~------W~~l~~~~~~p~~R~~hsav~~~-~~lyV 295 (650)
|.+|.+|++++++ ++|||+||... ...++++|+||+.+++ |+.+... .+.+|++|++++++ ++|||
T Consensus 535 p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~--p~~~R~~~~~~~~~~~~iyv 612 (695)
T 2zwa_A 535 FQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH--PLFQRYGSQIKYITPRKLLI 612 (695)
T ss_dssp GGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC--GGGCCBSCEEEEEETTEEEE
T ss_pred CCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC--CCCCcccceEEEeCCCEEEE
Confidence 9999999988877 89999999854 3678999999999999 8988752 25789999999998 99999
Q ss_pred EcCCCCCC--CCCCcEEEEecCC
Q 006334 296 YGGCGEDE--RPLNELLVLQLGA 316 (650)
Q Consensus 296 ~GG~~~~~--~~~~d~~~l~l~~ 316 (650)
+||..... ...+++++||+..
T Consensus 613 ~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 613 VGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp ECCBCSSCCCCTTTSEEEEETTT
T ss_pred ECCccCCCCCCCCCeEEEEECCC
Confidence 99986544 3678999999973
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=8.1e-31 Score=302.69 Aligned_cols=274 Identities=13% Similarity=0.132 Sum_probs=215.4
Q ss_pred CCCcCCCeEEeeecCCCCCCCcceeEEEEE--CCEEEEEccCCCCc------ccceEEEEECCCCcEEEeecCCCCCCCC
Q 006334 7 ENAKRAAMWLYPKVLGFNPPERWGHSACYS--HGAVYIFGGCCGGL------HFGDVLMLNLDTMVWSTLATTGQGPGPR 78 (650)
Q Consensus 7 ~~~~~~~~W~~~~~~g~~P~~R~ghs~v~~--~~~IyvfGG~~~~~------~~~dv~~yD~~t~sW~~l~~~g~~P~pR 78 (650)
..++.+++|..+. |.||.+|+++++ +++||++||..... ..+++++||+.+++|+.+..+ |.+|
T Consensus 170 ~~dp~~~~W~~~~-----~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~---~~~~ 241 (656)
T 1k3i_A 170 APQPGLGRWGPTI-----DLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT---VTKH 241 (656)
T ss_dssp CCCTTSCEEEEEE-----ECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE---ECSC
T ss_pred cCCCCCCeeeeec-----cCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCccc---CCCC
Confidence 4677889999643 356677777777 89999999976422 345899999999999998876 4455
Q ss_pred cce--EEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCccc
Q 006334 79 DSH--SAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYL 155 (650)
Q Consensus 79 ~~h--sa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~ 155 (650)
..+ ++++ .+++|||+||.+.. ++++||+.+++|+++ ..++.+|.+|+++++.+++|||+||..+ ....+
T Consensus 242 ~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~---~~~~~~R~~~s~~~~~dg~iyv~GG~~~-~~~~~ 313 (656)
T 1k3i_A 242 DMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPG---PDMQVARGYQSSATMSDGRVFTIGGSWS-GGVFE 313 (656)
T ss_dssp CCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEEC---CCCSSCCSSCEEEECTTSCEEEECCCCC-SSSCC
T ss_pred CCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeEC---CCCCccccccceEEecCCeEEEEeCccc-CCccc
Confidence 444 3444 58999999998653 799999999999997 5789999999999886799999999633 34478
Q ss_pred ceEEEEecCCCceeeccccC--CCCCC-----------------------------------------------------
Q 006334 156 NDLHVLDLKTMRWASPAVKG--DIPVP----------------------------------------------------- 180 (650)
Q Consensus 156 ~dv~~yd~~t~~Wt~i~~~~--~lP~~----------------------------------------------------- 180 (650)
+++++||+.+++|+.+.... +++..
T Consensus 314 ~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 314 KNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp CCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred ccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 89999999999999863211 11111
Q ss_pred ----CCcceeee---ecCEEEEEeccC---CCCccC---eEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEE
Q 006334 181 ----RDSHSSNV---IANRLFVYGGDC---GDQYHG---DIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYII 246 (650)
Q Consensus 181 ----R~~hs~v~---~~~~Iyv~GG~~---~~~~~n---~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~ 246 (650)
+..++++. ++++||++||.. +...++ ++++||+.+++|..+. .+.+|.+|..|+++++ +++|||+
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~ 472 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDGSTFIT 472 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTSCEEEE
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc-cCCCCCCcccCCeEECCCCCEEEE
Confidence 22344443 479999999954 233455 7899999999999986 3468899999999888 8999999
Q ss_pred eccCC------CcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE--CCeEEEEcCCC
Q 006334 247 GGVGD------KHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT--GSDIVIYGGCG 300 (650)
Q Consensus 247 GG~~~------~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~--~~~lyV~GG~~ 300 (650)
||.+. .....++++||+++++|+.+.. ++.+|.+|+++++ +++|||+||..
T Consensus 473 GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~---~~~~R~~hs~a~ll~dg~v~v~GG~~ 531 (656)
T 1k3i_A 473 GGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNP---NSIVRVYHSISLLLPDGRVFNGGGGL 531 (656)
T ss_dssp CCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCC---CSSCCCTTEEEEECTTSCEEEEECCC
T ss_pred CCcccCcCcCCCCcccceEEEcCCCCceeecCC---CCCccccccHhhcCCCcEEEecCCCC
Confidence 99753 3557899999999999999864 7889999998888 99999999953
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=1.1e-25 Score=259.89 Aligned_cols=243 Identities=16% Similarity=0.194 Sum_probs=186.7
Q ss_pred EEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCc------CcCeEEEEECCCCcEEeeecCCCCCC
Q 006334 55 VLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYK------KVNDLHILDLESKEWMRPECRGAPPS 126 (650)
Q Consensus 55 v~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~------~~ndv~~yD~~t~~W~~l~~~~~~P~ 126 (650)
+..||+.+++|..+..+ ||..+.++++ +++|||+||.+... ..+++++||+.+++|+.+. .+|.
T Consensus 168 ~~~~dp~~~~W~~~~~~-----P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~---~~~~ 239 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDL-----PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT---VTVT 239 (656)
T ss_dssp CCCCCTTSCEEEEEEEC-----SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE---EEEC
T ss_pred cccCCCCCCeeeeeccC-----CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc---ccCC
Confidence 44567889999988765 5566666666 99999999986532 2468999999999999873 3455
Q ss_pred CCccc--EEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEEEEec-cCCC
Q 006334 127 PRESH--TATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGG-DCGD 202 (650)
Q Consensus 127 ~R~~h--s~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG-~~~~ 202 (650)
+|..+ +++++.+++||++||... .++++||+.+++|+.+. ++|.+|..|+++.+ +++||++|| .++.
T Consensus 240 ~~~~~~~~~~~~~~g~lyv~GG~~~------~~v~~yd~~t~~W~~~~---~~~~~R~~~s~~~~~dg~iyv~GG~~~~~ 310 (656)
T 1k3i_A 240 KHDMFCPGISMDGNGQIVVTGGNDA------KKTSLYDSSSDSWIPGP---DMQVARGYQSSATMSDGRVFTIGGSWSGG 310 (656)
T ss_dssp SCCCSSCEEEECTTSCEEEECSSST------TCEEEEEGGGTEEEECC---CCSSCCSSCEEEECTTSCEEEECCCCCSS
T ss_pred CCCCccccccCCCCCCEEEeCCCCC------CceEEecCcCCceeECC---CCCccccccceEEecCCeEEEEeCcccCC
Confidence 55444 456566899999999843 27999999999999876 89999999999999 999999999 5666
Q ss_pred CccCeEEEEECCCCcEEEeeecC--CCCC---------------------------------------------------
Q 006334 203 QYHGDIDMLDMNSLTWSRLAIIG--SSPG--------------------------------------------------- 229 (650)
Q Consensus 203 ~~~n~v~~yd~~t~~W~~i~~~g--~~P~--------------------------------------------------- 229 (650)
..++++++||+.+++|+.++..+ +++.
T Consensus 311 ~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~ 390 (656)
T 1k3i_A 311 VFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 390 (656)
T ss_dssp SCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEE
T ss_pred cccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccc
Confidence 68899999999999999973110 1111
Q ss_pred ------cccceEEEE---ECCEEEEEeccCC---CcccC---eEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCeE
Q 006334 230 ------VRAGHAAIN---IGTKVYIIGGVGD---KHYYN---DIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT-GSDI 293 (650)
Q Consensus 230 ------~R~~~s~v~---~~~~IyI~GG~~~---~~~~~---dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~-~~~l 293 (650)
.+..++++. .+++|||+||... ...++ ++++||+.+++|..+. .+.+|.+|.+|+++++ +++|
T Consensus 391 ~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~i 469 (656)
T 1k3i_A 391 NRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDGST 469 (656)
T ss_dssp TTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTSCE
T ss_pred ccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc-cCCCCCCcccCCeEECCCCCE
Confidence 122344443 4799999999742 33444 7999999999999986 2358999999999988 9999
Q ss_pred EEEcCCCCC-----CCCCCcEEEEecC
Q 006334 294 VIYGGCGED-----ERPLNELLVLQLG 315 (650)
Q Consensus 294 yV~GG~~~~-----~~~~~d~~~l~l~ 315 (650)
||+||.... ....+++++||..
T Consensus 470 ~v~GG~~~~~~~~~~~~~~~v~~ydp~ 496 (656)
T 1k3i_A 470 FITGGQRRGIPFEDSTPVFTPEIYVPE 496 (656)
T ss_dssp EEECCBSBCCTTCCCSBCCCCEEEEGG
T ss_pred EEECCcccCcCcCCCCcccceEEEcCC
Confidence 999997532 2346778888875
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.02 E-value=0.0078 Score=62.26 Aligned_cols=246 Identities=11% Similarity=0.020 Sum_probs=139.9
Q ss_pred CCCcceeEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEE-eecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCc
Q 006334 25 PPERWGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWST-LATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKV 102 (650)
Q Consensus 25 P~~R~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~-l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ 102 (650)
+.....+.+++.++++|+.... .+.+.++|+.+.+... ++.. ..-+.+++ .++++||.... .
T Consensus 41 ~lg~~~~~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~------~~p~~i~~~~~g~lyv~~~~-----~ 104 (328)
T 3dsm_A 41 KLGDVAQSMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITGF------TSPRYIHFLSDEKAYVTQIW-----D 104 (328)
T ss_dssp CCBSCEEEEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEECC------SSEEEEEEEETTEEEEEEBS-----C
T ss_pred ccCccceEEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCCC------CCCcEEEEeCCCeEEEEECC-----C
Confidence 3445567778889999997752 4679999999887633 3221 22234444 68899997643 3
Q ss_pred CeEEEEECCCCcEEe-eecCCCCCC-CCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCC
Q 006334 103 NDLHILDLESKEWMR-PECRGAPPS-PRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVP 180 (650)
Q Consensus 103 ndv~~yD~~t~~W~~-l~~~~~~P~-~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~ 180 (650)
+.++++|+.+.+-.. +.. +.... ...-..+++ .+++||+..-. .-+.+.++|+.+++....-..+..|
T Consensus 105 ~~v~~iD~~t~~~~~~i~~-g~~~~~~~~p~~i~~-~~~~lyv~~~~------~~~~v~viD~~t~~~~~~i~~g~~p-- 174 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIEC-PDMDMESGSTEQMVQ-YGKYVYVNCWS------YQNRILKIDTETDKVVDELTIGIQP-- 174 (328)
T ss_dssp SEEEEEETTTTEEEEEEEC-TTCCTTTCBCCCEEE-ETTEEEEEECT------TCCEEEEEETTTTEEEEEEECSSCB--
T ss_pred CeEEEEECCCCeEEEEEEc-CCccccCCCcceEEE-ECCEEEEEcCC------CCCEEEEEECCCCeEEEEEEcCCCc--
Confidence 689999999887543 221 12000 001223333 47899987420 1246999999988765422112211
Q ss_pred CCcceeee-ecCEEEEEeccCCCCc-----cCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCC
Q 006334 181 RDSHSSNV-IANRLFVYGGDCGDQY-----HGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDK 252 (650)
Q Consensus 181 R~~hs~v~-~~~~Iyv~GG~~~~~~-----~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~ 252 (650)
+.++. -++++|+......... .+.++++|+.+.+....-. .+....-..++.. ++.+|+..+
T Consensus 175 ---~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~---~~~g~~p~~la~~~d~~~lyv~~~---- 244 (328)
T 3dsm_A 175 ---TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK---FKLGDWPSEVQLNGTRDTLYWINN---- 244 (328)
T ss_dssp ---CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE---CCTTCCCEEEEECTTSCEEEEESS----
T ss_pred ---cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe---cCCCCCceeEEEecCCCEEEEEcc----
Confidence 22332 3578887754221111 3689999999887664321 2222222344444 457888732
Q ss_pred cccCeEEEEECCCCcEEEeecCCCCCC-CcceeEEEEE--CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 253 HYYNDIWILNVSTCSWSQLDTCGQQPQ-GRFSHAAVVT--GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 253 ~~~~dv~~yD~~t~~W~~l~~~~~~p~-~R~~hsav~~--~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
.+++||+.+.+...... .+. ...-.++++. ++.|||....+. ...+.+++++..
T Consensus 245 ----~v~~~d~~t~~~~~~~~---~~~~~~~p~gi~vdp~~g~lyva~~~~y--~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 ----DIWRMPVEADRVPVRPF---LEFRDTKYYGLTVNPNNGEVYVADAIDY--QQQGIVYRYSPQ 301 (328)
T ss_dssp ----SEEEEETTCSSCCSSCS---BCCCSSCEEEEEECTTTCCEEEEECTTS--SSEEEEEEECTT
T ss_pred ----EEEEEECCCCceeeeee---ecCCCCceEEEEEcCCCCeEEEEccccc--ccCCEEEEECCC
Confidence 79999999877532111 111 2333455553 578999862211 123467777664
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.82 E-value=0.019 Score=59.22 Aligned_cols=226 Identities=9% Similarity=0.040 Sum_probs=131.0
Q ss_pred cceEEEEECCCCcEEEeecC--CCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEe-eecCCCCCCCC
Q 006334 52 FGDVLMLNLDTMVWSTLATT--GQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMR-PECRGAPPSPR 128 (650)
Q Consensus 52 ~~dv~~yD~~t~sW~~l~~~--g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~-l~~~~~~P~~R 128 (650)
.+.+..||+.++++...... ...+.....+.+++.++++|+.... .+.+.++|+.+.+-.. +. .. .
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~---~~---~ 84 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRIT---GF---T 84 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEE---CC---S
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcC---CC---C
Confidence 56899999999987653210 0113334456677789999998742 3679999999887633 31 11 2
Q ss_pred cccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceee-ccccCCCC-CCCCcceeeeecCEEEEEeccCCCCccC
Q 006334 129 ESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-PAVKGDIP-VPRDSHSSNVIANRLFVYGGDCGDQYHG 206 (650)
Q Consensus 129 ~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-i~~~~~lP-~~R~~hs~v~~~~~Iyv~GG~~~~~~~n 206 (650)
.-..+++..++++|+.... .+.+.++|+.+.+... +. .+... ....-+.++..++++|+..-. ..+
T Consensus 85 ~p~~i~~~~~g~lyv~~~~-------~~~v~~iD~~t~~~~~~i~-~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~ 152 (328)
T 3dsm_A 85 SPRYIHFLSDEKAYVTQIW-------DYRIFIINPKTYEITGYIE-CPDMDMESGSTEQMVQYGKYVYVNCWS----YQN 152 (328)
T ss_dssp SEEEEEEEETTEEEEEEBS-------CSEEEEEETTTTEEEEEEE-CTTCCTTTCBCCCEEEETTEEEEEECT----TCC
T ss_pred CCcEEEEeCCCeEEEEECC-------CCeEEEEECCCCeEEEEEE-cCCccccCCCcceEEEECCEEEEEcCC----CCC
Confidence 2234444356899987643 2469999998876542 22 11200 000222344467899988421 236
Q ss_pred eEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCc-c----cCeEEEEECCCCcEEEeecCCCCCCC
Q 006334 207 DIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKH-Y----YNDIWILNVSTCSWSQLDTCGQQPQG 280 (650)
Q Consensus 207 ~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~-~----~~dv~~yD~~t~~W~~l~~~~~~p~~ 280 (650)
.+.++|+.+.+....-..+..| +.++. -++++|+..-..... . ...++++|+.+.+....-. .+..
T Consensus 153 ~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~---~~~g 224 (328)
T 3dsm_A 153 RILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK---FKLG 224 (328)
T ss_dssp EEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE---CCTT
T ss_pred EEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe---cCCC
Confidence 8999999988765433222222 22222 357887774321111 1 3689999999987653221 2222
Q ss_pred cceeEEEEE--CCeEEEEcCCCCCCCCCCcEEEEecCCC
Q 006334 281 RFSHAAVVT--GSDIVIYGGCGEDERPLNELLVLQLGAE 317 (650)
Q Consensus 281 R~~hsav~~--~~~lyV~GG~~~~~~~~~d~~~l~l~~~ 317 (650)
..-..+++. ++.||+..+ .++++|....
T Consensus 225 ~~p~~la~~~d~~~lyv~~~---------~v~~~d~~t~ 254 (328)
T 3dsm_A 225 DWPSEVQLNGTRDTLYWINN---------DIWRMPVEAD 254 (328)
T ss_dssp CCCEEEEECTTSCEEEEESS---------SEEEEETTCS
T ss_pred CCceeEEEecCCCEEEEEcc---------EEEEEECCCC
Confidence 222345555 456777632 6888888643
No 21
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.25 E-value=0.073 Score=53.17 Aligned_cols=201 Identities=13% Similarity=0.146 Sum_probs=122.9
Q ss_pred CcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccce
Q 006334 78 RDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLND 157 (650)
Q Consensus 78 R~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~d 157 (650)
-+-+.+.+.++.||+-.|..+ .+.+.++|+.+.+-..- ..++..-++.+++.. +++||+.... .+.
T Consensus 21 ~ftqGL~~~~~~LyestG~~g---~S~v~~vD~~tgkv~~~---~~l~~~~fgeGi~~~-~~~ly~ltw~-------~~~ 86 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETG---RSSVRKVDLETGRILQR---AEVPPPYFGAGIVAW-RDRLIQLTWR-------NHE 86 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTT---SCEEEEEETTTCCEEEE---EECCTTCCEEEEEEE-TTEEEEEESS-------SSE
T ss_pred cccccEEEECCEEEEECCCCC---CceEEEEECCCCCEEEE---EeCCCCcceeEEEEe-CCEEEEEEee-------CCE
Confidence 455678888999999888644 35789999999876552 233444445556665 6999998654 257
Q ss_pred EEEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEE-EeeecCCCCCc-ccceE
Q 006334 158 LHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWS-RLAIIGSSPGV-RAGHA 235 (650)
Q Consensus 158 v~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~-~i~~~g~~P~~-R~~~s 235 (650)
+++||.++.+-.. .++.+..+..++..++++|+.-| .+.++.+|+.+.+-. .+... .-+.+ +.---
T Consensus 87 v~v~D~~tl~~~~-----ti~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~-~~g~~~~~lNe 154 (243)
T 3mbr_X 87 GFVYDLATLTPRA-----RFRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVT-AGGRPLDNLNE 154 (243)
T ss_dssp EEEEETTTTEEEE-----EEECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECE-ETTEECCCEEE
T ss_pred EEEEECCcCcEEE-----EEeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEc-cCCccccccee
Confidence 9999998765443 22223355666666778888755 258999999987644 33321 11222 11123
Q ss_pred EEEECCEEEEEeccCCCcccCeEEEEECCCCc---EEEeecCC-CC-----CCCcceeEEEEE--CCeEEEEcCCCCCCC
Q 006334 236 AINIGTKVYIIGGVGDKHYYNDIWILNVSTCS---WSQLDTCG-QQ-----PQGRFSHAAVVT--GSDIVIYGGCGEDER 304 (650)
Q Consensus 236 ~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~---W~~l~~~~-~~-----p~~R~~hsav~~--~~~lyV~GG~~~~~~ 304 (650)
+...+++||+- .+ ..++|.+.|+++.+ |..+..+- .. +..-.--+.+.. .+.|||.|-.
T Consensus 155 Le~~~G~lyan--vw---~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~----- 224 (243)
T 3mbr_X 155 LEWVNGELLAN--VW---LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR----- 224 (243)
T ss_dssp EEEETTEEEEE--ET---TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT-----
T ss_pred eEEeCCEEEEE--EC---CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC-----
Confidence 45568888854 21 24689999999986 44433211 01 111122344444 4678888753
Q ss_pred CCCcEEEEecC
Q 006334 305 PLNELLVLQLG 315 (650)
Q Consensus 305 ~~~d~~~l~l~ 315 (650)
-..+|.+.+.
T Consensus 225 -wp~~~~v~~~ 234 (243)
T 3mbr_X 225 -WPMLYEIRLT 234 (243)
T ss_dssp -CSEEEEEEEC
T ss_pred -CCcEEEEEEe
Confidence 3566666653
No 22
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.18 E-value=0.29 Score=50.73 Aligned_cols=224 Identities=17% Similarity=0.258 Sum_probs=124.9
Q ss_pred ceeEEEEECCEEEEEccCCCCcccceEEEEECCCCc--EEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEE
Q 006334 29 WGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMV--WSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLH 106 (650)
Q Consensus 29 ~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~s--W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~ 106 (650)
...+.++.++.||+... ...++.||..+++ |+.-... ....+.++.++.||+... ...++
T Consensus 95 ~~~~~~~~~~~v~v~~~------~g~l~a~d~~tG~~~W~~~~~~------~~~~~p~~~~~~v~v~~~------~g~l~ 156 (376)
T 3q7m_A 95 LSGGVTVSGGHVYIGSE------KAQVYALNTSDGTVAWQTKVAG------EALSRPVVSDGLVLIHTS------NGQLQ 156 (376)
T ss_dssp EEEEEEEETTEEEEEET------TSEEEEEETTTCCEEEEEECSS------CCCSCCEEETTEEEEECT------TSEEE
T ss_pred cccCceEeCCEEEEEcC------CCEEEEEECCCCCEEEEEeCCC------ceEcCCEEECCEEEEEcC------CCeEE
Confidence 33445667889998543 2479999998764 7653221 112233456888887442 24799
Q ss_pred EEECCCCc--EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC--ceeeccccCCCCCCC-
Q 006334 107 ILDLESKE--WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM--RWASPAVKGDIPVPR- 181 (650)
Q Consensus 107 ~yD~~t~~--W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~--~Wt~i~~~~~lP~~R- 181 (650)
.||..+.+ |+.-. .......+...+.++. ++.+|+ |..+ ..++.||+.+. .|+.-. ..+...
T Consensus 157 ~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~~~-~~~v~~-g~~~-------g~l~~~d~~tG~~~w~~~~---~~~~~~~ 223 (376)
T 3q7m_A 157 ALNEADGAVKWTVNL-DMPSLSLRGESAPTTA-FGAAVV-GGDN-------GRVSAVLMEQGQMIWQQRI---SQATGST 223 (376)
T ss_dssp EEETTTCCEEEEEEC-CC-----CCCCCCEEE-TTEEEE-CCTT-------TEEEEEETTTCCEEEEEEC---CC-----
T ss_pred EEECCCCcEEEEEeC-CCCceeecCCCCcEEE-CCEEEE-EcCC-------CEEEEEECCCCcEEEEEec---ccCCCCc
Confidence 99998875 87631 1111111111222333 577666 3321 35888998765 576422 111111
Q ss_pred -------CcceeeeecCEEEEEeccCCCCccCeEEEEECCCCc--EEEeeecCCCCCcccceEEEEECCEEEEEeccCCC
Q 006334 182 -------DSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLT--WSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDK 252 (650)
Q Consensus 182 -------~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~--W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~ 252 (650)
.....+..++.+|+.+. ...++.||+.+.+ |+.-. . .....+..++.||+...
T Consensus 224 ~~~~~~~~~~~p~~~~~~v~~~~~------~g~l~~~d~~tG~~~w~~~~-----~---~~~~~~~~~~~l~~~~~---- 285 (376)
T 3q7m_A 224 EIDRLSDVDTTPVVVNGVVFALAY------NGNLTALDLRSGQIMWKREL-----G---SVNDFIVDGNRIYLVDQ---- 285 (376)
T ss_dssp ------CCCCCCEEETTEEEEECT------TSCEEEEETTTCCEEEEECC-----C---CEEEEEEETTEEEEEET----
T ss_pred ccccccccCCCcEEECCEEEEEec------CcEEEEEECCCCcEEeeccC-----C---CCCCceEECCEEEEEcC----
Confidence 22334455778887642 2478999987664 76532 1 12345667888988743
Q ss_pred cccCeEEEEECCCCc--EEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 253 HYYNDIWILNVSTCS--WSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 253 ~~~~dv~~yD~~t~~--W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
...+++||..+.+ |+.-. ...+...+.++.++.||+... ...++.++..
T Consensus 286 --~g~l~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~~~~l~v~~~-------~g~l~~~d~~ 336 (376)
T 3q7m_A 286 --NDRVMALTIDGGVTLWTQSD-----LLHRLLTSPVLYNGNLVVGDS-------EGYLHWINVE 336 (376)
T ss_dssp --TCCEEEEETTTCCEEEEECT-----TTTSCCCCCEEETTEEEEECT-------TSEEEEEETT
T ss_pred --CCeEEEEECCCCcEEEeecc-----cCCCcccCCEEECCEEEEEeC-------CCeEEEEECC
Confidence 2469999998876 66431 112223344556777777632 1357777765
No 23
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.12 E-value=0.33 Score=50.32 Aligned_cols=226 Identities=15% Similarity=0.229 Sum_probs=125.4
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEECCCCc--EEEeecCCCC----CCCCcceEEEEECCEEEEEcccCCCcCcCeE
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMV--WSTLATTGQG----PGPRDSHSAILWGHKMIVFGGTNGYKKVNDL 105 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~s--W~~l~~~g~~----P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv 105 (650)
+.++.++.||+.... ..++.||..+++ |+.-...... .......+.++.++.||+... ...+
T Consensus 48 ~p~v~~~~v~~~~~~------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------~g~l 115 (376)
T 3q7m_A 48 HPALADNVVYAADRA------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------KAQV 115 (376)
T ss_dssp CCEEETTEEEEECTT------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET------TSEE
T ss_pred ccEEECCEEEEEcCC------CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC------CCEE
Confidence 456778999997542 379999987654 7654321100 012333445567889988543 2579
Q ss_pred EEEECCCCc--EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc--eeeccccCCCCCCC
Q 006334 106 HILDLESKE--WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR--WASPAVKGDIPVPR 181 (650)
Q Consensus 106 ~~yD~~t~~--W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~--Wt~i~~~~~lP~~R 181 (650)
+.||..+.+ |+.- .... ...+.++. ++.+|+.... ..++.||..+.+ |..-.. ......+
T Consensus 116 ~a~d~~tG~~~W~~~-~~~~-----~~~~p~~~-~~~v~v~~~~--------g~l~~~d~~tG~~~W~~~~~-~~~~~~~ 179 (376)
T 3q7m_A 116 YALNTSDGTVAWQTK-VAGE-----ALSRPVVS-DGLVLIHTSN--------GQLQALNEADGAVKWTVNLD-MPSLSLR 179 (376)
T ss_dssp EEEETTTCCEEEEEE-CSSC-----CCSCCEEE-TTEEEEECTT--------SEEEEEETTTCCEEEEEECC-C-----C
T ss_pred EEEECCCCCEEEEEe-CCCc-----eEcCCEEE-CCEEEEEcCC--------CeEEEEECCCCcEEEEEeCC-CCceeec
Confidence 999998774 7653 1111 11122333 6777774321 368999987764 875321 1111112
Q ss_pred CcceeeeecCEEEEEeccCCCCccCeEEEEECCCCc--EEEeeecCCCCCcc--------cceEEEEECCEEEEEeccCC
Q 006334 182 DSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLT--WSRLAIIGSSPGVR--------AGHAAINIGTKVYIIGGVGD 251 (650)
Q Consensus 182 ~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~--W~~i~~~g~~P~~R--------~~~s~v~~~~~IyI~GG~~~ 251 (650)
...+.+..++.+|+ |..+ ..++.||+.+.+ |+.-.. .+... .....+..++.+|+.+.
T Consensus 180 ~~~~~~~~~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~--- 247 (376)
T 3q7m_A 180 GESAPTTAFGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRIS---QATGSTEIDRLSDVDTTPVVVNGVVFALAY--- 247 (376)
T ss_dssp CCCCCEEETTEEEE-CCTT-----TEEEEEETTTCCEEEEEECC---C-----------CCCCCCEEETTEEEEECT---
T ss_pred CCCCcEEECCEEEE-EcCC-----CEEEEEECCCCcEEEEEecc---cCCCCcccccccccCCCcEEECCEEEEEec---
Confidence 22344555677766 3222 478999987654 765431 11111 22334556788888642
Q ss_pred CcccCeEEEEECCCCc--EEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 252 KHYYNDIWILNVSTCS--WSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 252 ~~~~~dv~~yD~~t~~--W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
...+++||+++.+ |..-. . . ....++.++.||+... ...++.++..
T Consensus 248 ---~g~l~~~d~~tG~~~w~~~~-----~--~-~~~~~~~~~~l~~~~~-------~g~l~~~d~~ 295 (376)
T 3q7m_A 248 ---NGNLTALDLRSGQIMWKREL-----G--S-VNDFIVDGNRIYLVDQ-------NDRVMALTID 295 (376)
T ss_dssp ---TSCEEEEETTTCCEEEEECC-----C--C-EEEEEEETTEEEEEET-------TCCEEEEETT
T ss_pred ---CcEEEEEECCCCcEEeeccC-----C--C-CCCceEECCEEEEEcC-------CCeEEEEECC
Confidence 2468999998764 66431 1 1 2345556788888743 1357777765
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.11 E-value=0.12 Score=51.67 Aligned_cols=199 Identities=16% Similarity=0.148 Sum_probs=120.6
Q ss_pred ceeEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEE
Q 006334 29 WGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHIL 108 (650)
Q Consensus 29 ~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~y 108 (650)
+-+...+.++.||+-.|..+ .+.+.++|+.+++-..-... |..-++.+++..+++||+.... .+.+++|
T Consensus 22 ftqGL~~~~~~LyestG~~g---~S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~~ly~ltw~-----~~~v~v~ 90 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETG---RSSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRDRLIQLTWR-----NHEGFVY 90 (243)
T ss_dssp CEEEEEEETTEEEEEECCTT---SCEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEESS-----SSEEEEE
T ss_pred ccccEEEECCEEEEECCCCC---CceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCCEEEEEEee-----CCEEEEE
Confidence 33456677899999888543 35799999999876654444 4455777888899999997533 4789999
Q ss_pred ECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceee-ccccCCCCCCC-Cccee
Q 006334 109 DLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-PAVKGDIPVPR-DSHSS 186 (650)
Q Consensus 109 D~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-i~~~~~lP~~R-~~hs~ 186 (650)
|..+.+-..- .+.+..+.+++.. ++.||+.-|. +.++.+|+++.+-.. +.. +.-+.+. .-..+
T Consensus 91 D~~tl~~~~t-----i~~~~~Gwglt~d-g~~L~vSdgs--------~~l~~iDp~t~~~~~~I~V-~~~g~~~~~lNeL 155 (243)
T 3mbr_X 91 DLATLTPRAR-----FRYPGEGWALTSD-DSHLYMSDGT--------AVIRKLDPDTLQQVGSIKV-TAGGRPLDNLNEL 155 (243)
T ss_dssp ETTTTEEEEE-----EECSSCCCEEEEC-SSCEEEECSS--------SEEEEECTTTCCEEEEEEC-EETTEECCCEEEE
T ss_pred ECCcCcEEEE-----EeCCCCceEEeeC-CCEEEEECCC--------CeEEEEeCCCCeEEEEEEE-ccCCcccccceee
Confidence 9988765431 1122345555543 4678886442 469999998865433 221 1122221 11234
Q ss_pred eeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCC-C--------CcccceEEEEE--CCEEEEEeccCCCccc
Q 006334 187 NVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSS-P--------GVRAGHAAINI--GTKVYIIGGVGDKHYY 255 (650)
Q Consensus 187 v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~-P--------~~R~~~s~v~~--~~~IyI~GG~~~~~~~ 255 (650)
...+++||+--- ..+++.+.|+.+.+-...-..+.+ + ..-.--..+.. .+++||.|=. .
T Consensus 156 e~~~G~lyanvw-----~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~-----w 225 (243)
T 3mbr_X 156 EWVNGELLANVW-----LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR-----W 225 (243)
T ss_dssp EEETTEEEEEET-----TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT-----C
T ss_pred EEeCCEEEEEEC-----CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC-----C
Confidence 456888886432 236899999999875433222111 1 11111223333 4689999844 4
Q ss_pred CeEEEEEC
Q 006334 256 NDIWILNV 263 (650)
Q Consensus 256 ~dv~~yD~ 263 (650)
..+|...+
T Consensus 226 p~~~~v~~ 233 (243)
T 3mbr_X 226 PMLYEIRL 233 (243)
T ss_dssp SEEEEEEE
T ss_pred CcEEEEEE
Confidence 56665543
No 25
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.08 E-value=0.065 Score=55.52 Aligned_cols=223 Identities=13% Similarity=0.151 Sum_probs=117.8
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CC-EEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GH-KMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
+.+|+.|+.+ +.+++||..+++........ ..-.++++. ++ .||+.|+.+ ..++++|+.+.+.
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~ 66 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIPVG-----SNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNV 66 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEE
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEeecC-----CCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeE
Confidence 4577777643 46999999887655433221 112334443 34 577766543 4789999988865
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCE-EEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDK-MVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANR 192 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~-Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~ 192 (650)
...-.. ...-..++...+++ ||+.+.. + +.+++||+.+++...... ....-..++.. +..
T Consensus 67 ~~~~~~-----~~~v~~~~~spdg~~l~~~~~~-~------~~v~v~d~~~~~~~~~~~-----~~~~~~~~~~s~dg~~ 129 (391)
T 1l0q_A 67 IATVPA-----GSSPQGVAVSPDGKQVYVTNMA-S------STLSVIDTTSNTVAGTVK-----TGKSPLGLALSPDGKK 129 (391)
T ss_dssp EEEEEC-----SSSEEEEEECTTSSEEEEEETT-T------TEEEEEETTTTEEEEEEE-----CSSSEEEEEECTTSSE
T ss_pred EEEEEC-----CCCccceEECCCCCEEEEEECC-C------CEEEEEECCCCeEEEEEe-----CCCCcceEEECCCCCE
Confidence 443111 11223344444454 5554432 1 469999998876543221 11112233332 245
Q ss_pred EEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CC-EEEEEeccCCCcccCeEEEEECCCCcEEE
Q 006334 193 LFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GT-KVYIIGGVGDKHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 193 Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~-~IyI~GG~~~~~~~~dv~~yD~~t~~W~~ 270 (650)
+|+.++.+ +.+++||+.+.+....-..+. ....++.. ++ .||+.++.+ ..+++||+.+.+...
T Consensus 130 l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 130 LYVTNNGD-----KTVSVINTVTKAVINTVSVGR-----SPKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVID 194 (391)
T ss_dssp EEEEETTT-----TEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred EEEEeCCC-----CEEEEEECCCCcEEEEEecCC-----CcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEE
Confidence 76776543 489999998887655432211 11233332 23 666665432 469999999886554
Q ss_pred eecCCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 271 LDTCGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 271 l~~~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
.-.. ...-.++++. +++.+++++... ....++++++.
T Consensus 195 ~~~~-----~~~~~~~~~~~~g~~l~~~~~~~---~~~~v~~~d~~ 232 (391)
T 1l0q_A 195 TVKV-----EAAPSGIAVNPEGTKAYVTNVDK---YFNTVSMIDTG 232 (391)
T ss_dssp EEEC-----SSEEEEEEECTTSSEEEEEEECS---SCCEEEEEETT
T ss_pred EEec-----CCCccceEECCCCCEEEEEecCc---CCCcEEEEECC
Confidence 3321 1112233333 444444443210 13467777775
No 26
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.98 E-value=0.11 Score=52.40 Aligned_cols=199 Identities=12% Similarity=0.057 Sum_probs=116.7
Q ss_pred cceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceE
Q 006334 79 DSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDL 158 (650)
Q Consensus 79 ~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv 158 (650)
+...+.+.++.||+..|..+ .+.+.++|+++.+-..- ..++..-++.+++.. +++||+..... +.+
T Consensus 44 ftqGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~---~~l~~~~FgeGit~~-g~~ly~ltw~~-------~~v 109 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQ---IELGKRYFGEGISDW-KDKIVGLTWKN-------GLG 109 (262)
T ss_dssp EEEEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEE---EECCTTCCEEEEEEE-TTEEEEEESSS-------SEE
T ss_pred ccceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEE---EecCCccceeEEEEe-CCEEEEEEeeC-------CEE
Confidence 44566777899999888644 24688999999875542 122333334445555 68999985542 579
Q ss_pred EEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEE-EeeecCCCCCcccc-eEE
Q 006334 159 HVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWS-RLAIIGSSPGVRAG-HAA 236 (650)
Q Consensus 159 ~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~-~i~~~g~~P~~R~~-~s~ 236 (650)
++||+++.+-.. .++.+-.+..++..++.+|+.-| .+.++.+|+.+.+-. .+... .-..+... --+
T Consensus 110 ~v~D~~t~~~~~-----ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~-~~g~~~~~lNEL 177 (262)
T 3nol_A 110 FVWNIRNLRQVR-----SFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVT-AHGEELPELNEL 177 (262)
T ss_dssp EEEETTTCCEEE-----EEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECE-ETTEECCCEEEE
T ss_pred EEEECccCcEEE-----EEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEec-cCCcccccccee
Confidence 999998765442 22223355566666677888654 268999999987643 33321 11111111 124
Q ss_pred EEECCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCC--------CCCcceeEEEEE--CCeEEEEcCCCCCCCCC
Q 006334 237 INIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQ--------PQGRFSHAAVVT--GSDIVIYGGCGEDERPL 306 (650)
Q Consensus 237 v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~--------p~~R~~hsav~~--~~~lyV~GG~~~~~~~~ 306 (650)
...+++||+- . ...++|.+.|+++.+=...-..+.+ +..-.-.+.++. .+.+||.|-. -
T Consensus 178 e~~~G~lyan--~---w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~------W 246 (262)
T 3nol_A 178 EWVDGEIFAN--V---WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL------W 246 (262)
T ss_dssp EEETTEEEEE--E---TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT------C
T ss_pred EEECCEEEEE--E---ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC------C
Confidence 4458888854 2 2346899999999874332211111 111122444554 4678888753 3
Q ss_pred CcEEEEec
Q 006334 307 NELLVLQL 314 (650)
Q Consensus 307 ~d~~~l~l 314 (650)
..+|.+.+
T Consensus 247 p~~~ev~~ 254 (262)
T 3nol_A 247 PKVFEITL 254 (262)
T ss_dssp SEEEEEEE
T ss_pred CceEEEEE
Confidence 45666555
No 27
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.89 E-value=0.47 Score=50.28 Aligned_cols=221 Identities=11% Similarity=0.118 Sum_probs=110.9
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEE
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTA 133 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~ 133 (650)
.+.+||..+..-...... ......++..++..++.|+.++ .+..||+.+.+-...- . .. ...-..
T Consensus 220 ~i~~wd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~-~-~~---~~~v~~ 284 (445)
T 2ovr_B 220 TLRVWDIETGQCLHVLMG-----HVAAVRCVQYDGRRVVSGAYDF-----MVKVWDPETETCLHTL-Q-GH---TNRVYS 284 (445)
T ss_dssp EEEEEESSSCCEEEEEEC-----CSSCEEEEEECSSCEEEEETTS-----CEEEEEGGGTEEEEEE-C-CC---SSCEEE
T ss_pred EEEEEECCCCcEEEEEcC-----CcccEEEEEECCCEEEEEcCCC-----EEEEEECCCCcEeEEe-c-CC---CCceEE
Confidence 567777766553322111 1111222333666677776543 5778888776543210 1 11 111122
Q ss_pred EEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEEC
Q 006334 134 TLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDM 213 (650)
Q Consensus 134 ~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~ 213 (650)
..+ ++..++.|+.+ +.+.+||+.+.+-...- .........+..++.+++.|+.+ ..+..||+
T Consensus 285 ~~~-~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~ 346 (445)
T 2ovr_B 285 LQF-DGIHVVSGSLD-------TSIRVWDVETGNCIHTL-----TGHQSLTSGMELKDNILVSGNAD-----STVKIWDI 346 (445)
T ss_dssp EEE-CSSEEEEEETT-------SCEEEEETTTCCEEEEE-----CCCCSCEEEEEEETTEEEEEETT-----SCEEEEET
T ss_pred EEE-CCCEEEEEeCC-------CeEEEEECCCCCEEEEE-----cCCcccEEEEEEeCCEEEEEeCC-----CeEEEEEC
Confidence 223 56677777763 35888998776533211 11111222334456677777755 47899998
Q ss_pred CCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEee-cCCCCCCCcceeEEEEEC-C
Q 006334 214 NSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLD-TCGQQPQGRFSHAAVVTG-S 291 (650)
Q Consensus 214 ~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~-~~~~~p~~R~~hsav~~~-~ 291 (650)
.+.+-...- ...........++..++.+++.|+.+ ..+.+||+.+.+....- ..........-.++.+.. +
T Consensus 347 ~~~~~~~~~--~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 419 (445)
T 2ovr_B 347 KTGQCLQTL--QGPNKHQSAVTCLQFNKNFVITSSDD-----GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK 419 (445)
T ss_dssp TTCCEEEEE--CSTTSCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSE
T ss_pred CCCcEEEEE--ccCCCCCCCEEEEEECCCEEEEEeCC-----CeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCE
Confidence 776533221 11111223344455567777777654 36899999988754422 110001111112233333 4
Q ss_pred eEEEEcCCCCCCCCCCcEEEEecCC
Q 006334 292 DIVIYGGCGEDERPLNELLVLQLGA 316 (650)
Q Consensus 292 ~lyV~GG~~~~~~~~~d~~~l~l~~ 316 (650)
.+++.|+.+ +.....+++++++.
T Consensus 420 ~~la~~~~d--g~~~~~l~v~df~~ 442 (445)
T 2ovr_B 420 LVCAVGSRN--GTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEEECSS--SSSCCEEEEEECCC
T ss_pred EEEEEcccC--CCCccEEEEEECCC
Confidence 455666643 32345678888763
No 28
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.87 E-value=0.078 Score=61.51 Aligned_cols=224 Identities=11% Similarity=0.113 Sum_probs=124.9
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.|+| |.. ..-+++||+.+++++..... ..+ ...-.+++.. ++.|||.. . +.+++||+.+.+|
T Consensus 417 ~g~lWi-gt~-----~~Gl~~~~~~~~~~~~~~~~-~~~-~~~v~~i~~d~~g~lwigt-~------~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 417 EGNLWF-GTY-----LGNISYYNTRLKKFQIIELE-KNE-LLDVRVFYEDKNKKIWIGT-H------AGVFVIDLASKKV 481 (781)
T ss_dssp TSCEEE-EET-----TEEEEEECSSSCEEEECCST-TTC-CCCEEEEEECTTSEEEEEE-T------TEEEEEESSSSSC
T ss_pred CCCEEE-Eec-----cCCEEEEcCCCCcEEEeccC-CCC-CCeEEEEEECCCCCEEEEE-C------CceEEEeCCCCeE
Confidence 467777 221 23589999999988877532 111 1122233332 47787732 1 4699999999888
Q ss_pred EeeecCCCCCC-CCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeee-ecCEE
Q 006334 116 MRPECRGAPPS-PRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNV-IANRL 193 (650)
Q Consensus 116 ~~l~~~~~~P~-~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~-~~~~I 193 (650)
+.......... ...-.+++...++.|+|- ... .-+++||+.+++|+.......++.... .+++. -++.|
T Consensus 482 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~-------~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~l 552 (781)
T 3v9f_A 482 IHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFG-------GGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQM 552 (781)
T ss_dssp CEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESS-------SCEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCE
T ss_pred EecccCcccccccceeEEEEEcCCCCEEEE-EcC-------CCEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCE
Confidence 76532211111 122233334445777763 221 238899999988887653223332111 11221 24667
Q ss_pred EEEeccCCCCccCeE-EEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCCCcEEEe
Q 006334 194 FVYGGDCGDQYHGDI-DMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQL 271 (650)
Q Consensus 194 yv~GG~~~~~~~n~v-~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l 271 (650)
++... +.+ ++||+.+.++..+.....+|.... .+++.. ++.|++.+. +.+.+||+++.++...
T Consensus 553 Wi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~~~~~~ 617 (781)
T 3v9f_A 553 WLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------TGISCYITSKKCFYTY 617 (781)
T ss_dssp EEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-------SCEEEEETTTTEEEEE
T ss_pred EEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-------CceEEEECCCCceEEe
Confidence 77532 356 899999988887764333443332 334333 467777642 3589999999999887
Q ss_pred ecCCCCCCCcceeEEEEE-CCeEEEEcCC
Q 006334 272 DTCGQQPQGRFSHAAVVT-GSDIVIYGGC 299 (650)
Q Consensus 272 ~~~~~~p~~R~~hsav~~-~~~lyV~GG~ 299 (650)
.....++...+...++.. .+..+.|||.
T Consensus 618 ~~~dGl~~~~f~~~~~~~~~~G~l~~g~~ 646 (781)
T 3v9f_A 618 DHSNNIPQGSFISGCVTKDHNGLIYFGSI 646 (781)
T ss_dssp CGGGTCCSSCEEEEEEEECTTSCEEEEET
T ss_pred cccCCccccccccCceEECCCCEEEEECC
Confidence 653334544444333333 3444555663
No 29
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.81 E-value=0.15 Score=54.35 Aligned_cols=224 Identities=12% Similarity=0.047 Sum_probs=119.4
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccE
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHT 132 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs 132 (650)
..++++|.....-..+.... ......+..-+++.+++++.++. ...++++|+.+.+...+.. .+ ....+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~----~~v~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~---~~--~~~~~ 227 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP----QPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVAS---FP--RHNGA 227 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES----SCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEEEC---CS--SCEEE
T ss_pred ceEEEEcCCCCCCEEEeCCC----CcceeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEeec---CC--CcccC
Confidence 68999998866555543321 11122222236666677765432 2689999999988766521 11 12233
Q ss_pred EEEEcCCEEEE-EccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEE
Q 006334 133 ATLVGDDKMVI-FGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDM 210 (650)
Q Consensus 133 ~~~~~~~~Lyv-~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~ 210 (650)
.....+++.++ .+.. +. ...++++|+.+.+...+. ... ......... +++.+++++... -...++.
T Consensus 228 ~~~spdg~~la~~~~~-~g----~~~i~~~d~~~~~~~~l~---~~~--~~~~~~~~spdg~~l~~~s~~~--g~~~i~~ 295 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSK-TG----SLNLYVMDLASGQIRQVT---DGR--SNNTEPTWFPDSQNLAFTSDQA--GRPQVYK 295 (415)
T ss_dssp EEECTTSSEEEEEECT-TS----SCEEEEEETTTCCEEECC---CCS--SCEEEEEECTTSSEEEEEECTT--SSCEEEE
T ss_pred EEEcCCCCEEEEEEec-CC----CceEEEEECCCCCEEeCc---CCC--CcccceEECCCCCEEEEEECCC--CCcEEEE
Confidence 44444565444 4433 21 246999999888776543 111 111122222 455444444321 1247999
Q ss_pred EECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE
Q 006334 211 LDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT 289 (650)
Q Consensus 211 yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~ 289 (650)
+|+.+.....+.. .......++. .+++.+++++..+. ...++++|+.+.+...+... . ...+..+.
T Consensus 296 ~d~~~~~~~~l~~-----~~~~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~~-----~-~~~~~~~s 362 (415)
T 2hqs_A 296 VNINGGAPQRITW-----EGSQNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSST-----F-LDETPSLA 362 (415)
T ss_dssp EETTSSCCEECCC-----SSSEEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCCS-----S-SCEEEEEC
T ss_pred EECCCCCEEEEec-----CCCcccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecCC-----C-CcCCeEEc
Confidence 9998876554431 1122222222 34555555554322 35799999999988766431 1 22233333
Q ss_pred -CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 290 -GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 290 -~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
+++.+++++.... ...++++++.
T Consensus 363 pdg~~l~~~s~~~~---~~~l~~~d~~ 386 (415)
T 2hqs_A 363 PNGTMVIYSSSQGM---GSVLNLVSTD 386 (415)
T ss_dssp TTSSEEEEEEEETT---EEEEEEEETT
T ss_pred CCCCEEEEEEcCCC---ccEEEEEECC
Confidence 5677777664221 2367777775
No 30
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.78 E-value=0.23 Score=50.11 Aligned_cols=195 Identities=10% Similarity=0.076 Sum_probs=114.9
Q ss_pred eEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEEC
Q 006334 31 HSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDL 110 (650)
Q Consensus 31 hs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~ 110 (650)
..+.+.++.||+-.|..+ .+.+.++|+.+++-..-... +..-++.+++..+++||+.-.. .+.+++||+
T Consensus 46 qGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw~-----~~~v~v~D~ 114 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTWK-----NGLGFVWNI 114 (262)
T ss_dssp EEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEESS-----SSEEEEEET
T ss_pred ceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEee-----CCEEEEEEC
Confidence 344556889999888533 35789999999876554333 3344566788889999997542 468999999
Q ss_pred CCCcEEe-eecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceee-ccccCCCCCCCCc-ceee
Q 006334 111 ESKEWMR-PECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-PAVKGDIPVPRDS-HSSN 187 (650)
Q Consensus 111 ~t~~W~~-l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-i~~~~~lP~~R~~-hs~v 187 (650)
.+.+-.. ++. +-.+.+++.. ++.||+.-| .+.++.+|+.+.+-.. +... .-..+... ..+.
T Consensus 115 ~t~~~~~ti~~------~~eG~glt~d-g~~L~~SdG--------s~~i~~iDp~T~~v~~~I~V~-~~g~~~~~lNELe 178 (262)
T 3nol_A 115 RNLRQVRSFNY------DGEGWGLTHN-DQYLIMSDG--------TPVLRFLDPESLTPVRTITVT-AHGEELPELNELE 178 (262)
T ss_dssp TTCCEEEEEEC------SSCCCCEEEC-SSCEEECCS--------SSEEEEECTTTCSEEEEEECE-ETTEECCCEEEEE
T ss_pred ccCcEEEEEEC------CCCceEEecC-CCEEEEECC--------CCeEEEEcCCCCeEEEEEEec-cCCccccccceeE
Confidence 9876543 221 2244455533 467777543 2469999998865433 2211 11111111 1244
Q ss_pred eecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCC--------CcccceEEEEE--CCEEEEEeccCCCcccCe
Q 006334 188 VIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSP--------GVRAGHAAINI--GTKVYIIGGVGDKHYYND 257 (650)
Q Consensus 188 ~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P--------~~R~~~s~v~~--~~~IyI~GG~~~~~~~~d 257 (650)
..+++||+--- ..+++.+.|+.+.+-...-..+.+. ..-.-...+.. .+++||.|-. ...
T Consensus 179 ~~~G~lyan~w-----~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~-----Wp~ 248 (262)
T 3nol_A 179 WVDGEIFANVW-----QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL-----WPK 248 (262)
T ss_dssp EETTEEEEEET-----TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT-----CSE
T ss_pred EECCEEEEEEc-----cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC-----CCc
Confidence 55888886422 2468999999998855433221111 11111233333 3689999854 345
Q ss_pred EEEEE
Q 006334 258 IWILN 262 (650)
Q Consensus 258 v~~yD 262 (650)
+|...
T Consensus 249 ~~ev~ 253 (262)
T 3nol_A 249 VFEIT 253 (262)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 55543
No 31
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.77 E-value=0.43 Score=47.65 Aligned_cols=231 Identities=13% Similarity=0.134 Sum_probs=116.8
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.+++.|+.++ .+.+||..+......... . ...-.+++.. ++++++.|+.++ .+.+||+.+.+-
T Consensus 34 ~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~-h---~~~v~~~~~~~~~~~l~s~~~d~-----~i~vwd~~~~~~ 99 (312)
T 4ery_A 34 NGEWLASSSADK-----LIKIWGAYDGKFEKTISG-H---KLGISDVAWSSDSNLLVSASDDK-----TLKIWDVSSGKC 99 (312)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTCCEEEEECC-C---SSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCE
T ss_pred CCCEEEEeeCCC-----eEEEEeCCCcccchhhcc-C---CCceEEEEEcCCCCEEEEECCCC-----EEEEEECCCCcE
Confidence 356666666443 578889888776554321 1 1111223332 567777787643 688899887764
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRL 193 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~I 193 (650)
...- .+ ....-..+....++.+++.|+.+ ..+.+||+.+.+-... +......-..+.+ ++.+
T Consensus 100 ~~~~-~~---~~~~v~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~ 163 (312)
T 4ery_A 100 LKTL-KG---HSNYVFCCNFNPQSNLIVSGSFD-------ESVRIWDVKTGKCLKT-----LPAHSDPVSAVHFNRDGSL 163 (312)
T ss_dssp EEEE-EC---CSSCEEEEEECSSSSEEEEEETT-------SCEEEEETTTCCEEEE-----ECCCSSCEEEEEECTTSSE
T ss_pred EEEE-cC---CCCCEEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCEEEEE-----ecCCCCcEEEEEEcCCCCE
Confidence 3320 11 01112233333456777777763 2488899877643321 1111111122222 4567
Q ss_pred EEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEeec
Q 006334 194 FVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDT 273 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~ 273 (650)
++.|+.+ ..+..||+.+.+....-. ..............+++.++.|+.+ ..+.+||+.+..-...-.
T Consensus 164 l~~~~~d-----~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~ 231 (312)
T 4ery_A 164 IVSSSYD-----GLCRIWDTASGQCLKTLI--DDDNPPVSFVKFSPNGKYILAATLD-----NTLKLWDYSKGKCLKTYT 231 (312)
T ss_dssp EEEEETT-----SCEEEEETTTCCEEEEEC--CSSCCCEEEEEECTTSSEEEEEETT-----TEEEEEETTTTEEEEEEC
T ss_pred EEEEeCC-----CcEEEEECCCCceeeEEe--ccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEEE
Confidence 7777765 468899988776443221 1111111111222245666666643 368999998875433221
Q ss_pred CCCCCCCcceeEEEE-ECCeEEEEcCCCCCCCCCCcEEEEecCC
Q 006334 274 CGQQPQGRFSHAAVV-TGSDIVIYGGCGEDERPLNELLVLQLGA 316 (650)
Q Consensus 274 ~~~~p~~R~~hsav~-~~~~lyV~GG~~~~~~~~~d~~~l~l~~ 316 (650)
. .......-..... .++.+++.|+.+ ..+.++++..
T Consensus 232 ~-~~~~~~~~~~~~~~~~~~~l~sg~~d------g~i~vwd~~~ 268 (312)
T 4ery_A 232 G-HKNEKYCIFANFSVTGGKWIVSGSED------NLVYIWNLQT 268 (312)
T ss_dssp S-SCCSSSCCCEEEECSSSCEEEECCTT------SCEEEEETTT
T ss_pred e-cCCceEEEEEEEEeCCCcEEEEECCC------CEEEEEECCC
Confidence 1 1111111112222 256677777642 3566777653
No 32
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.70 E-value=0.24 Score=51.92 Aligned_cols=201 Identities=11% Similarity=0.148 Sum_probs=101.4
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
++.+|+.++.+ ..+++||+.+.+....... ....-.++++. ++.+|+.++.+ ..+++||+.+.+
T Consensus 180 ~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~ 245 (433)
T 3bws_A 180 HNELWVSQMQA-----NAVHVFDLKTLAYKATVDL----TGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKL 245 (433)
T ss_dssp GTEEEEEEGGG-----TEEEEEETTTCCEEEEEEC----SSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTE
T ss_pred CCEEEEEECCC-----CEEEEEECCCceEEEEEcC----CCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCc
Confidence 45666666532 4688999887664432221 11122333443 34566666433 369999998876
Q ss_pred EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCc-ccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cC
Q 006334 115 WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEAN-YLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--AN 191 (650)
Q Consensus 115 W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~-~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~ 191 (650)
.... .+....-..++...+++.+++++....... .-..+++||+.+.+..... ..+ ..-..++.. ++
T Consensus 246 ~~~~-----~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~---~~~--~~~~~~~~~~~g~ 315 (433)
T 3bws_A 246 EIRK-----TDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI---GPP--GNKRHIVSGNTEN 315 (433)
T ss_dssp EEEE-----CCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE---EEE--ECEEEEEECSSTT
T ss_pred EEEE-----ecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec---cCC--CCcceEEECCCCC
Confidence 6443 111122233444445655555554221100 1247889999876543321 001 111122222 34
Q ss_pred EEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCc----------ccCeEEE
Q 006334 192 RLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKH----------YYNDIWI 260 (650)
Q Consensus 192 ~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~----------~~~dv~~ 260 (650)
.+|+.++.+ +.+.+||+.+.+-...-.. ...-..++.. +++.+++++..... .-..+++
T Consensus 316 ~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~ 385 (433)
T 3bws_A 316 KIYVSDMCC-----SKIEVYDLKEKKVQKSIPV-----FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYV 385 (433)
T ss_dssp EEEEEETTT-----TEEEEEETTTTEEEEEEEC-----SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEE
T ss_pred EEEEEecCC-----CEEEEEECCCCcEEEEecC-----CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEE
Confidence 677776644 4799999987764433211 1111233332 34444444332211 1247999
Q ss_pred EECCCCcEEEe
Q 006334 261 LNVSTCSWSQL 271 (650)
Q Consensus 261 yD~~t~~W~~l 271 (650)
||+.+.+....
T Consensus 386 ~d~~~~~~~~~ 396 (433)
T 3bws_A 386 IDTTTDTVKEF 396 (433)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCcEEEE
Confidence 99988775544
No 33
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.70 E-value=0.33 Score=56.27 Aligned_cols=212 Identities=11% Similarity=0.091 Sum_probs=115.7
Q ss_pred ceEEEEECCCCcEEEeecCCC-CCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCC-C-CCC
Q 006334 53 GDVLMLNLDTMVWSTLATTGQ-GPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAP-P-SPR 128 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~-~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~-P-~~R 128 (650)
.-+++||+.++++........ .+. ..-.++... ++.|||.. . +.+++||+.+++|+........ . ...
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~-~~v~~i~~d~~g~lwigt-~------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVN-ENVYAILPDGEGNLWLGT-L------SALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSC-SCEEEEEECSSSCEEEEE-S------SCEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCC-CeeEEEEECCCCCEEEEe-c------CceeEEeCCCCeEEEccccccccccCCc
Confidence 358999999998887754211 111 111222222 46777743 2 3599999999999886322100 0 111
Q ss_pred cccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeecccc---CCCCCCCCcceeee-ecCEEEEEeccCCCCc
Q 006334 129 ESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVK---GDIPVPRDSHSSNV-IANRLFVYGGDCGDQY 204 (650)
Q Consensus 129 ~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~---~~lP~~R~~hs~v~-~~~~Iyv~GG~~~~~~ 204 (650)
.-.++....++.|++-.. +-+++||+.++++ ..... ..++.. .-.+++. .++.|++...
T Consensus 499 ~i~~i~~d~~g~lWigt~---------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT~------ 561 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGGE---------EGLSVFKQEGLDI-QKASILPVSNVTKL-FTNCIYEASNGIIWVGTR------ 561 (795)
T ss_dssp CEEEEEECTTCCEEEEES---------SCEEEEEEETTEE-EECCCSCSCGGGGS-CEEEEEECTTSCEEEEES------
T ss_pred eEEEEEECCCCCEEEEeC---------CceEEEeCCCCeE-EEecCCCCCCCCCC-eeEEEEECCCCCEEEEeC------
Confidence 122333334577777432 1388999988887 43210 111111 1111222 2466776432
Q ss_pred cCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcce
Q 006334 205 HGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFS 283 (650)
Q Consensus 205 ~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~ 283 (650)
+.+++||+.+.++........+|.... .+++.. ++.|++.+. ..+.+||+++.++..+.....++...+.
T Consensus 562 -~Gl~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~ 632 (795)
T 4a2l_A 562 -EGFYCFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN-------RGISCFNPETEKFRNFTESDGLQSNQFN 632 (795)
T ss_dssp -SCEEEEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEET-------TEEEEEETTTTEEEEECGGGTCSCSCEE
T ss_pred -CCceeECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEcCCcCCCccccCc
Confidence 268999999999888764333443322 233333 357877752 4689999999999887653334444443
Q ss_pred eEE-EEECCeEEEEcC
Q 006334 284 HAA-VVTGSDIVIYGG 298 (650)
Q Consensus 284 hsa-v~~~~~lyV~GG 298 (650)
..+ +...+.-+.|||
T Consensus 633 ~~~~~~~~~G~l~~g~ 648 (795)
T 4a2l_A 633 TASYCRTSVGQMYFGG 648 (795)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred cCceeECCCCeEEEec
Confidence 333 333333444555
No 34
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.68 E-value=0.1 Score=52.78 Aligned_cols=155 Identities=8% Similarity=-0.002 Sum_probs=97.4
Q ss_pred cceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceE
Q 006334 79 DSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDL 158 (650)
Q Consensus 79 ~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv 158 (650)
+..++.+.++.||+..|..+. +.++|+++.+-..- . ++..-++.+++.. +++||+....+ +.+
T Consensus 56 ftqGL~~~~~~Ly~stG~~g~-----v~~iD~~Tgkv~~~---~-l~~~~FgeGit~~-g~~Ly~ltw~~-------~~v 118 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQGT-----LRQLSLESAQPVWM---E-RLGNIFAEGLASD-GERLYQLTWTE-------GLL 118 (268)
T ss_dssp CEEEEEEETTEEEEEETTTTE-----EEECCSSCSSCSEE---E-ECTTCCEEEEEEC-SSCEEEEESSS-------CEE
T ss_pred ccceEEEECCEEEEEcCCCCE-----EEEEECCCCcEEeE---E-CCCCcceeEEEEe-CCEEEEEEccC-------CEE
Confidence 446777779999998886543 88999999865432 1 2222233445544 68999985542 579
Q ss_pred EEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEE-eeecCCCCCcc-cceEE
Q 006334 159 HVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR-LAIIGSSPGVR-AGHAA 236 (650)
Q Consensus 159 ~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~-i~~~g~~P~~R-~~~s~ 236 (650)
++||+++.+-.. .++.+-.+..++..+..+|+.-| .+.++.+|+.+.+-.. +... .-+.+. .---+
T Consensus 119 ~V~D~~Tl~~~~-----ti~~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~-~~g~~v~~lNeL 186 (268)
T 3nok_A 119 FTWSGMPPQRER-----TTRYSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVK-LRGQPVELINEL 186 (268)
T ss_dssp EEEETTTTEEEE-----EEECSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECE-ETTEECCCEEEE
T ss_pred EEEECCcCcEEE-----EEeCCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeC-CCCccccccccc
Confidence 999998765543 22223345566666788998765 3689999999876443 3321 112221 11223
Q ss_pred EEECCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 237 INIGTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 237 v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
...+++||+- . ...++|.+.|+++.+
T Consensus 187 e~~dG~lyan--v---w~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 187 ECANGVIYAN--I---WHSSDVLEIDPATGT 212 (268)
T ss_dssp EEETTEEEEE--E---TTCSEEEEECTTTCB
T ss_pred EEeCCEEEEE--E---CCCCeEEEEeCCCCc
Confidence 4558888853 2 224689999999986
No 35
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.62 E-value=0.32 Score=51.55 Aligned_cols=226 Identities=11% Similarity=0.124 Sum_probs=120.8
Q ss_pred EEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 34 CYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 34 v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
+..++..++.|+.+ ..+.+||..+..-...-.. ....-.+...++.+++.|+.++ .+.++|..+.
T Consensus 139 ~~~d~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~l~sg~~dg-----~i~vwd~~~~ 203 (435)
T 1p22_A 139 LQYDDQKIVSGLRD-----NTIKIWDKNTLECKRILTG-----HTGSVLCLQYDERVIITGSSDS-----TVRVWDVNTG 203 (435)
T ss_dssp EECCSSEEEEEESS-----SCEEEEESSSCCEEEEECC-----CSSCEEEEECCSSEEEEEETTS-----CEEEEESSSC
T ss_pred EEECCCEEEEEeCC-----CeEEEEeCCCCeEEEEEcC-----CCCcEEEEEECCCEEEEEcCCC-----eEEEEECCCC
Confidence 34467777777754 3688999887765433221 1112233334777888887654 5888998887
Q ss_pred cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeeecCEE
Q 006334 114 EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRL 193 (650)
Q Consensus 114 ~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~I 193 (650)
+....- . . ....-..+.+ ++.+++.|+.+ ..+.+||+.+..-..... .+........++..++..
T Consensus 204 ~~~~~~-~-~---h~~~v~~l~~-~~~~l~s~s~d-------g~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 268 (435)
T 1p22_A 204 EMLNTL-I-H---HCEAVLHLRF-NNGMMVTCSKD-------RSIAVWDMASPTDITLRR--VLVGHRAAVNVVDFDDKY 268 (435)
T ss_dssp CEEEEE-C-C---CCSCEEEEEC-CTTEEEEEETT-------SCEEEEECSSSSCCEEEE--EECCCSSCEEEEEEETTE
T ss_pred cEEEEE-c-C---CCCcEEEEEE-cCCEEEEeeCC-------CcEEEEeCCCCCCceeee--EecCCCCcEEEEEeCCCE
Confidence 654321 1 1 1111122222 35567777763 358888887654221100 011111222333446667
Q ss_pred EEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEeec
Q 006334 194 FVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDT 273 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~ 273 (650)
++.|+.+ ..+.+||+.+.+-...-. . ......++..++.+++.|+.+ ..+.+||+.+..-...-.
T Consensus 269 l~s~~~d-----g~i~vwd~~~~~~~~~~~--~---~~~~v~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~ 333 (435)
T 1p22_A 269 IVSASGD-----RTIKVWNTSTCEFVRTLN--G---HKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLRVLE 333 (435)
T ss_dssp EEEEETT-----SEEEEEETTTCCEEEEEE--C---CSSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEEEC
T ss_pred EEEEeCC-----CeEEEEECCcCcEEEEEc--C---CCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCCCCEEEEEe
Confidence 7777654 478899988765433221 1 112233444466677777654 368999998765432211
Q ss_pred CCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 274 CGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 274 ~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
.....-.++..++..++.|+.+ ..+.++++.
T Consensus 334 -----~h~~~v~~~~~~~~~l~sg~~d------g~i~vwd~~ 364 (435)
T 1p22_A 334 -----GHEELVRCIRFDNKRIVSGAYD------GKIKVWDLV 364 (435)
T ss_dssp -----CCSSCEEEEECCSSEEEEEETT------SCEEEEEHH
T ss_pred -----CCcCcEEEEEecCCEEEEEeCC------CcEEEEECC
Confidence 0111123344477888888743 356667664
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.55 E-value=0.35 Score=49.87 Aligned_cols=222 Identities=15% Similarity=0.164 Sum_probs=115.4
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CC-EEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GH-KMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
..||+.|+.+ ..+++||..+++.......+ ..-.++++. ++ .||+.|.. ...+++||+.+++.
T Consensus 44 ~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~-----~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 44 TKVYVANAHS-----NDVSIIDTATNNVIATVPAG-----SSPQGVAVSPDGKQVYVTNMA-----SSTLSVIDTTSNTV 108 (391)
T ss_dssp SEEEEEEGGG-----TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEETT-----TTEEEEEETTTTEE
T ss_pred CEEEEECCCC-----CeEEEEECCCCeEEEEEECC-----CCccceEECCCCCEEEEEECC-----CCEEEEEECCCCeE
Confidence 4677776533 47999999888765443321 122333333 34 46655432 25699999998875
Q ss_pred EeeecCCCCCCCCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANR 192 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~ 192 (650)
...-.. ......+....++ .||+.++.+ +.+++||+.+.+....-..+ ..-..++.. ++.
T Consensus 109 ~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~dg~~ 171 (391)
T 1l0q_A 109 AGTVKT-----GKSPLGLALSPDGKKLYVTNNGD-------KTVSVINTVTKAVINTVSVG-----RSPKGIAVTPDGTK 171 (391)
T ss_dssp EEEEEC-----SSSEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEECC-----SSEEEEEECTTSSE
T ss_pred EEEEeC-----CCCcceEEECCCCCEEEEEeCCC-------CEEEEEECCCCcEEEEEecC-----CCcceEEECCCCCE
Confidence 443111 1122334444444 466666542 36899999887665432111 111222222 346
Q ss_pred EEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CC-EEEEEeccCCCcccCeEEEEECCCCcEEE
Q 006334 193 LFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GT-KVYIIGGVGDKHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 193 Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~-~IyI~GG~~~~~~~~dv~~yD~~t~~W~~ 270 (650)
+|+.++.+ +.+++||+.+.+....... ......++.. ++ .||+.+. . .....+++||+.+.+-..
T Consensus 172 l~~~~~~~-----~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~-~--~~~~~v~~~d~~~~~~~~ 238 (391)
T 1l0q_A 172 VYVANFDS-----MSISVIDTVTNSVIDTVKV-----EAAPSGIAVNPEGTKAYVTNV-D--KYFNTVSMIDTGTNKITA 238 (391)
T ss_dssp EEEEETTT-----TEEEEEETTTTEEEEEEEC-----SSEEEEEEECTTSSEEEEEEE-C--SSCCEEEEEETTTTEEEE
T ss_pred EEEEeCCC-----CEEEEEECCCCeEEEEEec-----CCCccceEECCCCCEEEEEec-C--cCCCcEEEEECCCCeEEE
Confidence 77766543 5799999988765544321 1111222222 34 4555432 1 123579999998875433
Q ss_pred eecCCCCCCCcceeEEEEE-CC-eEEEEcCCCCCCCCCCcEEEEecC
Q 006334 271 LDTCGQQPQGRFSHAAVVT-GS-DIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 271 l~~~~~~p~~R~~hsav~~-~~-~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
.-.. ...-.++++. ++ .||+.++.+ ..+.++++.
T Consensus 239 ~~~~-----~~~~~~~~~s~dg~~l~~s~~~d------~~v~v~d~~ 274 (391)
T 1l0q_A 239 RIPV-----GPDPAGIAVTPDGKKVYVALSFX------NTVSVIDTA 274 (391)
T ss_dssp EEEC-----CSSEEEEEECTTSSEEEEEETTT------TEEEEEETT
T ss_pred EEec-----CCCccEEEEccCCCEEEEEcCCC------CEEEEEECC
Confidence 2211 1111233333 34 455665432 456777765
No 37
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.53 E-value=0.25 Score=49.88 Aligned_cols=156 Identities=13% Similarity=0.035 Sum_probs=98.5
Q ss_pred eeEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEE
Q 006334 30 GHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILD 109 (650)
Q Consensus 30 ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD 109 (650)
.+.+.+.++.||+-.|..+ .+.++|+.+++-..-. . +..-++.+++..+++||+.... .+.+++||
T Consensus 57 tqGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l---~~~~FgeGit~~g~~Ly~ltw~-----~~~v~V~D 122 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-R---LGNIFAEGLASDGERLYQLTWT-----EGLLFTWS 122 (268)
T ss_dssp EEEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-E---CTTCCEEEEEECSSCEEEEESS-----SCEEEEEE
T ss_pred cceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-C---CCCcceeEEEEeCCEEEEEEcc-----CCEEEEEE
Confidence 3455667899999888543 3899999988643332 2 3344666788889999997542 46899999
Q ss_pred CCCCcEEe-eecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceee-ccccCCCCCCCC-ccee
Q 006334 110 LESKEWMR-PECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-PAVKGDIPVPRD-SHSS 186 (650)
Q Consensus 110 ~~t~~W~~-l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-i~~~~~lP~~R~-~hs~ 186 (650)
+.+.+-.. ++ .+-.+.+++.. .+.||+.-|. +.++.+|+++.+-.. +.. ..-+.+.. -..+
T Consensus 123 ~~Tl~~~~ti~------~~~eGwGLt~D-g~~L~vSdGs--------~~l~~iDp~T~~v~~~I~V-~~~g~~v~~lNeL 186 (268)
T 3nok_A 123 GMPPQRERTTR------YSGEGWGLCYW-NGKLVRSDGG--------TMLTFHEPDGFALVGAVQV-KLRGQPVELINEL 186 (268)
T ss_dssp TTTTEEEEEEE------CSSCCCCEEEE-TTEEEEECSS--------SEEEEECTTTCCEEEEEEC-EETTEECCCEEEE
T ss_pred CCcCcEEEEEe------CCCceeEEecC-CCEEEEECCC--------CEEEEEcCCCCeEEEEEEe-CCCCccccccccc
Confidence 99876543 22 12234555554 4788887552 479999998865443 221 11121211 1223
Q ss_pred eeecCEEEEEeccCCCCccCeEEEEECCCCcEEE
Q 006334 187 NVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR 220 (650)
Q Consensus 187 v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~ 220 (650)
...+++||+-- + ..+++.+.|+.+.+-..
T Consensus 187 e~~dG~lyanv-w----~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 187 ECANGVIYANI-W----HSSDVLEIDPATGTVVG 215 (268)
T ss_dssp EEETTEEEEEE-T----TCSEEEEECTTTCBEEE
T ss_pred EEeCCEEEEEE-C----CCCeEEEEeCCCCcEEE
Confidence 44578888532 1 24689999999987443
No 38
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.51 E-value=0.33 Score=47.01 Aligned_cols=229 Identities=12% Similarity=0.008 Sum_probs=117.3
Q ss_pred ccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCC-CcEEeeecCCCCCCCC
Q 006334 51 HFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLES-KEWMRPECRGAPPSPR 128 (650)
Q Consensus 51 ~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t-~~W~~l~~~~~~P~~R 128 (650)
....++++|+.++....+... ...-.++.+ .+++.+++++. ..++++|+.+ .+...+. ......
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~-----~~~v~~~~~spdg~~l~~~~~------~~i~~~d~~~~~~~~~~~---~~~~~~ 85 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQT-----PELFEAPNWSPDGKYLLLNSE------GLLYRLSLAGDPSPEKVD---TGFATI 85 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEE-----SSCCEEEEECTTSSEEEEEET------TEEEEEESSSCCSCEECC---CTTCCC
T ss_pred cceeEEEEeCCCCceeeeccC-----CcceEeeEECCCCCEEEEEcC------CeEEEEeCCCCCCceEec---cccccc
Confidence 346799999999887765433 111223333 35666666642 4799999998 7766642 111112
Q ss_pred cccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cC-EEEEEeccCCCCccC
Q 006334 129 ESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-AN-RLFVYGGDCGDQYHG 206 (650)
Q Consensus 129 ~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~-~Iyv~GG~~~~~~~n 206 (650)
....+....+++.+++++.... ....+|.++..+.....+. ... . ...+... ++ .|++.++.++. -
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~---~~~~l~~~~~~~~~~~~~~---~~~-~--~~~~~~spdg~~l~~~~~~~~~---~ 153 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEF---GKSAIYLLPSTGGTPRLMT---KNL-P--SYWHGWSPDGKSFTYCGIRDQV---F 153 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTT---SSCEEEEEETTCCCCEECC---SSS-S--EEEEEECTTSSEEEEEEEETTE---E
T ss_pred cccceEECCCCCEEEEEEeCCC---CcceEEEEECCCCceEEee---cCC-C--ccceEECCCCCEEEEEECCCCc---e
Confidence 2233444456776666664211 2457889988776655443 111 1 2222222 34 45544443321 3
Q ss_pred eEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEE
Q 006334 207 DIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAA 286 (650)
Q Consensus 207 ~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsa 286 (650)
.+|.++..+.....+.. .+ ..........+++.+++++..+ ....+|.+++.......+... ......+
T Consensus 154 ~l~~~~~~~~~~~~~~~---~~-~~~~~~~~s~dg~~l~~~~~~~--~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~ 222 (297)
T 2ojh_A 154 DIYSMDIDSGVETRLTH---GE-GRNDGPDYSPDGRWIYFNSSRT--GQMQIWRVRVDGSSVERITDS-----AYGDWFP 222 (297)
T ss_dssp EEEEEETTTCCEEECCC---SS-SCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCEEECCCC-----SEEEEEE
T ss_pred EEEEEECCCCcceEccc---CC-CccccceECCCCCEEEEEecCC--CCccEEEECCCCCCcEEEecC-----CcccCCe
Confidence 67888888777766542 11 1111222222455444443222 245789999888777666421 1111222
Q ss_pred EEE-CCeEEEEcCCCCCCC-----CCCcEEEEecCC
Q 006334 287 VVT-GSDIVIYGGCGEDER-----PLNELLVLQLGA 316 (650)
Q Consensus 287 v~~-~~~lyV~GG~~~~~~-----~~~d~~~l~l~~ 316 (650)
.+. +++.+++++...... ....++++++..
T Consensus 223 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 223 HPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp EECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred EECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 222 556555554322111 124577777753
No 39
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.51 E-value=0.82 Score=45.99 Aligned_cols=198 Identities=9% Similarity=0.016 Sum_probs=100.6
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCC-----CCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEEC
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPG-----PRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDL 110 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~-----pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~ 110 (650)
+.+|+.+.. .+.+++||+.+.+-......+.... +..-+.+++. ++.+|+.+... ...+++||+
T Consensus 101 ~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~ 171 (353)
T 3vgz_A 101 QTLWFGNTV-----NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDG 171 (353)
T ss_dssp TEEEEEETT-----TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEET
T ss_pred CEEEEEecC-----CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcC
Confidence 456666553 2479999998877533322211111 1112334443 35677765321 246999999
Q ss_pred CCCcEEeeecCCCCCCCCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee
Q 006334 111 ESKEWMRPECRGAPPSPRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI 189 (650)
Q Consensus 111 ~t~~W~~l~~~~~~P~~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~ 189 (650)
.+.+-...-. . ....-+.++...++ .||+... -+.+++||+.+.+-......+..........++..
T Consensus 172 ~~~~~~~~~~---~-~~~~~~~~~~s~dg~~l~~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 172 GNIKLKTAIQ---N-TGKMSTGLALDSEGKRLYTTNA--------DGELITIDTADNKILSRKKLLDDGKEHFFINISLD 239 (353)
T ss_dssp TTTEEEEEEC---C-CCTTCCCCEEETTTTEEEEECT--------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE
T ss_pred CCCceEEEec---C-CCCccceEEECCCCCEEEEEcC--------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC
Confidence 8876443211 0 11112334444444 4555432 13688999887654322111111011111122322
Q ss_pred --cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEEC-CEEEEEeccCCCcccCeEEEEECCCC
Q 006334 190 --ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIG-TKVYIIGGVGDKHYYNDIWILNVSTC 266 (650)
Q Consensus 190 --~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~-~~IyI~GG~~~~~~~~dv~~yD~~t~ 266 (650)
++.+|+.... .+.+++||+.+.+....-.. +.+ ...+...+ +.+|+.... .+.+++||+.+.
T Consensus 240 ~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~---~~~--~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~ 304 (353)
T 3vgz_A 240 TARQRAFITDSK-----AAEVLVVDTRNGNILAKVAA---PES--LAVLFNPARNEAYVTHRQ-----AGKVSVIDAKSY 304 (353)
T ss_dssp TTTTEEEEEESS-----SSEEEEEETTTCCEEEEEEC---SSC--CCEEEETTTTEEEEEETT-----TTEEEEEETTTT
T ss_pred CCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEc---CCC--ceEEECCCCCEEEEEECC-----CCeEEEEECCCC
Confidence 3557766532 26899999988776543322 222 12222233 457776532 247999999888
Q ss_pred cEEEe
Q 006334 267 SWSQL 271 (650)
Q Consensus 267 ~W~~l 271 (650)
+....
T Consensus 305 ~~~~~ 309 (353)
T 3vgz_A 305 KVVKT 309 (353)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 75543
No 40
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.49 E-value=0.44 Score=47.41 Aligned_cols=214 Identities=13% Similarity=0.144 Sum_probs=109.5
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
+.+++.|+.+ ..+.+||..+..+........ . ...-.++.+. ++++++.|+.++ .+..||+.+.+..
T Consensus 109 ~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~~~~~ 176 (337)
T 1gxr_A 109 GCTLIVGGEA-----STLSIWDLAAPTPRIKAELTS-S-APACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQTLV 176 (337)
T ss_dssp SSEEEEEESS-----SEEEEEECCCC--EEEEEEEC-S-SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEE
T ss_pred CCEEEEEcCC-----CcEEEEECCCCCcceeeeccc-C-CCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCcee
Confidence 4555555532 368899998877544332211 0 1111223332 566777776543 5889999887654
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEEE
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLFV 195 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv 195 (650)
..- . . ....-.++....++.+++.|+.+ ..+.+||+.+.+-.... ..+ ..-.++... ++.+++
T Consensus 177 ~~~-~-~--~~~~i~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~---~~~--~~v~~~~~s~~~~~l~ 240 (337)
T 1gxr_A 177 RQF-Q-G--HTDGASCIDISNDGTKLWTGGLD-------NTVRSWDLREGRQLQQH---DFT--SQIFSLGYCPTGEWLA 240 (337)
T ss_dssp EEE-C-C--CSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEE---ECS--SCEEEEEECTTSSEEE
T ss_pred eee-e-c--ccCceEEEEECCCCCEEEEEecC-------CcEEEEECCCCceEeee---cCC--CceEEEEECCCCCEEE
Confidence 421 1 1 11222334444466677777753 35889998776543221 111 111222222 456777
Q ss_pred EeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCCCcEEEeecC
Q 006334 196 YGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTC 274 (650)
Q Consensus 196 ~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~ 274 (650)
+|+.+ ..+..||+.+..-..+.. . ...-.++... ++++++.|+.+ ..+.+||+.+.+-.....
T Consensus 241 ~~~~~-----~~i~~~~~~~~~~~~~~~---~--~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~~~~- 304 (337)
T 1gxr_A 241 VGMES-----SNVEVLHVNKPDKYQLHL---H--ESCVLSLKFAYCGKWFVSTGKD-----NLLNAWRTPYGASIFQSK- 304 (337)
T ss_dssp EEETT-----SCEEEEETTSSCEEEECC---C--SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEE-
T ss_pred EEcCC-----CcEEEEECCCCCeEEEcC---C--ccceeEEEECCCCCEEEEecCC-----CcEEEEECCCCeEEEEec-
Confidence 77654 468899988776443321 1 1111222222 45667776643 368999998876553321
Q ss_pred CCCCCCcceeEEEEE-CCeEEEEcCC
Q 006334 275 GQQPQGRFSHAAVVT-GSDIVIYGGC 299 (650)
Q Consensus 275 ~~~p~~R~~hsav~~-~~~lyV~GG~ 299 (650)
....-.++.+. ++.+++.|+.
T Consensus 305 ----~~~~v~~~~~s~~~~~l~~~~~ 326 (337)
T 1gxr_A 305 ----ESSSVLSCDISVDDKYIVTGSG 326 (337)
T ss_dssp ----CSSCEEEEEECTTSCEEEEEET
T ss_pred ----CCCcEEEEEECCCCCEEEEecC
Confidence 11111223333 4566676664
No 41
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.46 E-value=0.32 Score=50.97 Aligned_cols=198 Identities=10% Similarity=-0.013 Sum_probs=102.4
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcc-eEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDS-HSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~-hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
++.+|+.++.+ ..+++||+.+.+................ .++++ .++++|+.|+.+ ..+++||+.+.+
T Consensus 133 ~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~ 202 (433)
T 3bws_A 133 NTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA-----NAVHVFDLKTLA 202 (433)
T ss_dssp SSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCC
T ss_pred CCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC-----CEEEEEECCCce
Confidence 56777776643 3599999998876653221110011111 12222 267888877643 468999998876
Q ss_pred EEeeecCCCCCCCCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCE
Q 006334 115 WMRPECRGAPPSPRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANR 192 (650)
Q Consensus 115 W~~l~~~~~~P~~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~ 192 (650)
....-. .....-..++...++ .+|+.++.+ ..+.+||+.+.+..... +....-..++.. ++.
T Consensus 203 ~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~-------~~i~~~d~~~~~~~~~~-----~~~~~~~~~~~~~~g~ 266 (433)
T 3bws_A 203 YKATVD----LTGKWSKILLYDPIRDLVYCSNWIS-------EDISVIDRKTKLEIRKT-----DKIGLPRGLLLSKDGK 266 (433)
T ss_dssp EEEEEE----CSSSSEEEEEEETTTTEEEEEETTT-------TEEEEEETTTTEEEEEC-----CCCSEEEEEEECTTSS
T ss_pred EEEEEc----CCCCCeeEEEEcCCCCEEEEEecCC-------CcEEEEECCCCcEEEEe-----cCCCCceEEEEcCCCC
Confidence 443211 111122334444444 455655432 36899999877654321 111111222222 344
Q ss_pred EEEEeccCCCCc---cCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CC-EEEEEeccCCCcccCeEEEEECCCCc
Q 006334 193 LFVYGGDCGDQY---HGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GT-KVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 193 Iyv~GG~~~~~~---~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~-~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
.+++++...... -..+++||+.+.+....... + .....++.. ++ .+|+.++.+ ..+.+||+.+.+
T Consensus 267 ~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~---~--~~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~ 336 (433)
T 3bws_A 267 ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP---P--GNKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKK 336 (433)
T ss_dssp EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE---E--ECEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTE
T ss_pred EEEEEECCCCccccCCCeEEEEECCCCcEEeeccC---C--CCcceEEECCCCCEEEEEecCC-----CEEEEEECCCCc
Confidence 444444322211 25789999988764443211 0 111122222 33 677776543 479999998765
Q ss_pred EEE
Q 006334 268 WSQ 270 (650)
Q Consensus 268 W~~ 270 (650)
-..
T Consensus 337 ~~~ 339 (433)
T 3bws_A 337 VQK 339 (433)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 42
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.41 E-value=0.25 Score=50.25 Aligned_cols=195 Identities=11% Similarity=0.066 Sum_probs=100.0
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-C--CEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-G--HKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~--~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
++.+++.|+.++ .+.+||.....+..+..... ....-.++.+. + +.+++.|+.++ .+.++|+.+.
T Consensus 22 ~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~ 89 (379)
T 3jrp_A 22 YGKRLATCSSDK-----TIKIFEVEGETHKLIDTLTG--HEGPVWRVDWAHPKFGTILASCSYDG-----KVLIWKEENG 89 (379)
T ss_dssp SSSEEEEEETTS-----CEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEEETT
T ss_pred CCCEEEEEECCC-----cEEEEecCCCcceeeeEecC--CCCcEEEEEeCCCCCCCEEEEeccCC-----EEEEEEcCCC
Confidence 356666676543 57888887666766543311 01111233332 2 67777777643 5788898888
Q ss_pred cEEeeecCCCCCCCCcccEEEEEcC--CEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--
Q 006334 114 EWMRPECRGAPPSPRESHTATLVGD--DKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-- 189 (650)
Q Consensus 114 ~W~~l~~~~~~P~~R~~hs~~~~~~--~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-- 189 (650)
+|..+...... ...-.++....+ +.+++.|+.+ ..+.+||+.+............ ...-.++...
T Consensus 90 ~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~--~~~v~~~~~~~~ 158 (379)
T 3jrp_A 90 RWSQIAVHAVH--SASVNSVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAH--AIGVNSASWAPA 158 (379)
T ss_dssp EEEEEEEECCC--SSCEEEEEECCGGGCSEEEEEETT-------SEEEEEECCTTSCCCEEEEECC--TTCEEEEEECCC
T ss_pred ceeEeeeecCC--CcceEEEEeCCCCCCCEEEEecCC-------CcEEEEecCCCCceeeEEecCC--CCceEEEEEcCc
Confidence 87665322111 122223333334 5677777763 3578888876532211100000 1111122222
Q ss_pred ------------cCEEEEEeccCCCCccCeEEEEECCCC--cEEEeeecCCCCCcccceEEEE-EC---CEEEEEeccCC
Q 006334 190 ------------ANRLFVYGGDCGDQYHGDIDMLDMNSL--TWSRLAIIGSSPGVRAGHAAIN-IG---TKVYIIGGVGD 251 (650)
Q Consensus 190 ------------~~~Iyv~GG~~~~~~~n~v~~yd~~t~--~W~~i~~~g~~P~~R~~~s~v~-~~---~~IyI~GG~~~ 251 (650)
++.+++.|+.++ .+..||+.+. .|..+...... ...-.+++. .+ +.+++.|+.++
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGH--SDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp C----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCC--SSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred cccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecc--cCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 366777777653 6777876543 35554422111 111122222 23 57888877543
Q ss_pred CcccCeEEEEECCCC
Q 006334 252 KHYYNDIWILNVSTC 266 (650)
Q Consensus 252 ~~~~~dv~~yD~~t~ 266 (650)
.+.+||+.+.
T Consensus 232 -----~i~iwd~~~~ 241 (379)
T 3jrp_A 232 -----TCIIWTQDNE 241 (379)
T ss_dssp -----CEEEEEESST
T ss_pred -----EEEEEeCCCC
Confidence 4788888775
No 43
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.29 E-value=1.1 Score=47.21 Aligned_cols=211 Identities=13% Similarity=0.106 Sum_probs=105.6
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEE
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTA 133 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~ 133 (650)
.+.+||..++.....-.. ....-.+...++..++.|+.+ ..+..||+.+.+-...- .+ . ...-..
T Consensus 180 ~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~-~~-~---~~~v~~ 244 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYG-----HTSTVRCMHLHEKRVVSGSRD-----ATLRVWDIETGQCLHVL-MG-H---VAAVRC 244 (445)
T ss_dssp CEEEEETTTTEEEEEECC-----CSSCEEEEEEETTEEEEEETT-----SEEEEEESSSCCEEEEE-EC-C---SSCEEE
T ss_pred eEEEEECCcCcEEEEECC-----CCCcEEEEEecCCEEEEEeCC-----CEEEEEECCCCcEEEEE-cC-C---cccEEE
Confidence 466777766643322111 111112222334445566543 36888888876543321 11 1 111122
Q ss_pred EEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEEC
Q 006334 134 TLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDM 213 (650)
Q Consensus 134 ~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~ 213 (650)
+.. ++.+++.|+.+ ..+.+||+.+.+-... +.........+..++..++.|+.+ +.+..||+
T Consensus 245 ~~~-~~~~l~~~~~d-------g~i~iwd~~~~~~~~~-----~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~i~d~ 306 (445)
T 2ovr_B 245 VQY-DGRRVVSGAYD-------FMVKVWDPETETCLHT-----LQGHTNRVYSLQFDGIHVVSGSLD-----TSIRVWDV 306 (445)
T ss_dssp EEE-CSSCEEEEETT-------SCEEEEEGGGTEEEEE-----ECCCSSCEEEEEECSSEEEEEETT-----SCEEEEET
T ss_pred EEE-CCCEEEEEcCC-------CEEEEEECCCCcEeEE-----ecCCCCceEEEEECCCEEEEEeCC-----CeEEEEEC
Confidence 223 56677777763 3578888876543321 111111223334466777777755 46899998
Q ss_pred CCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCeE
Q 006334 214 NSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDI 293 (650)
Q Consensus 214 ~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~~l 293 (650)
.+.+-...- ........+...++.+++.|+.+ ..+.+||+.+.+-...-.. .......-.++..++.+
T Consensus 307 ~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~ 374 (445)
T 2ovr_B 307 ETGNCIHTL-----TGHQSLTSGMELKDNILVSGNAD-----STVKIWDIKTGQCLQTLQG--PNKHQSAVTCLQFNKNF 374 (445)
T ss_dssp TTCCEEEEE-----CCCCSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEEECS--TTSCSSCEEEEEECSSE
T ss_pred CCCCEEEEE-----cCCcccEEEEEEeCCEEEEEeCC-----CeEEEEECCCCcEEEEEcc--CCCCCCCEEEEEECCCE
Confidence 876543221 01111223334455566676643 3689999987654332110 01111222344456777
Q ss_pred EEEcCCCCCCCCCCcEEEEecC
Q 006334 294 VIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 294 yV~GG~~~~~~~~~d~~~l~l~ 315 (650)
++.|+.+ ..+.++++.
T Consensus 375 l~s~~~d------g~v~iwd~~ 390 (445)
T 2ovr_B 375 VITSSDD------GTVKLWDLK 390 (445)
T ss_dssp EEEEETT------SEEEEEETT
T ss_pred EEEEeCC------CeEEEEECC
Confidence 7777742 356667765
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.27 E-value=0.42 Score=48.50 Aligned_cols=151 Identities=11% Similarity=0.081 Sum_probs=78.6
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.+++.|+.+ ..+.+||..+..|..+..... ....-.++.+. ++++++.|+.++ .+..||+.+.++
T Consensus 19 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~ 86 (372)
T 1k8k_C 19 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTDR-----NAYVWTLKGRTW 86 (372)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEETTTTEEEEEETTS-----CEEEEEEETTEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecC--CCCcccEEEEeCCCCEEEEEcCCC-----eEEEEECCCCee
Confidence 45666677643 468899998887665544311 11112233333 567777777543 578888888877
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc-eeeccccCCCCCCCCcceeeee-cCEE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR-WASPAVKGDIPVPRDSHSSNVI-ANRL 193 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~-Wt~i~~~~~lP~~R~~hs~v~~-~~~I 193 (650)
....... .....-.++....++.+++.|+.+ ..+.+||+.+.. |...... ..+....-.++... ++.+
T Consensus 87 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~i~d~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 87 KPTLVIL--RINRAARCVRWAPNEKKFAVGSGS-------RVISICYFEQENDWWVCKHI-KKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp EEEEECC--CCSSCEEEEEECTTSSEEEEEETT-------SSEEEEEEETTTTEEEEEEE-CTTCCSCEEEEEECTTSSE
T ss_pred eeeEEee--cCCCceeEEEECCCCCEEEEEeCC-------CEEEEEEecCCCcceeeeee-ecccCCCeeEEEEcCCCCE
Confidence 6542111 112222333444466777777753 246667765543 3222111 01111111222222 4567
Q ss_pred EEEeccCCCCccCeEEEEECC
Q 006334 194 FVYGGDCGDQYHGDIDMLDMN 214 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~ 214 (650)
++.|+.+ ..+..||+.
T Consensus 157 l~~~~~d-----g~i~~~d~~ 172 (372)
T 1k8k_C 157 LAAGSCD-----FKCRIFSAY 172 (372)
T ss_dssp EEEEETT-----SCEEEEECC
T ss_pred EEEEcCC-----CCEEEEEcc
Confidence 7777754 467888854
No 45
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.19 E-value=0.25 Score=52.59 Aligned_cols=203 Identities=11% Similarity=0.093 Sum_probs=110.4
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCE-EEEEcccCCCcCcCeEEEEECCCCc
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHK-MIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~-lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
++..+++++.... ...++++|+.+++...+... .....+.++. +++ |++.+..++ ...+|.+|+.+.+
T Consensus 189 dg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~-----~~~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 189 DGSKLAYVTFESG--RSALVIQTLANGAVRQVASF-----PRHNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQ 258 (415)
T ss_dssp TSSEEEEEECTTS--SCEEEEEETTTCCEEEEECC-----SSCEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCC
T ss_pred CCCEEEEEEecCC--CcEEEEEECCCCcEEEeecC-----CCcccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCC
Confidence 3455555554321 25799999999887765433 1122233332 555 444443322 3579999999988
Q ss_pred EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeee-ecCEE
Q 006334 115 WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNV-IANRL 193 (650)
Q Consensus 115 W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~-~~~~I 193 (650)
...+.. . ...........+++.+++++..+. ...+|++|+.+.....+.. .......++. -+++.
T Consensus 259 ~~~l~~---~--~~~~~~~~~spdg~~l~~~s~~~g----~~~i~~~d~~~~~~~~l~~-----~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 259 IRQVTD---G--RSNNTEPTWFPDSQNLAFTSDQAG----RPQVYKVNINGGAPQRITW-----EGSQNQDADVSSDGKF 324 (415)
T ss_dssp EEECCC---C--SSCEEEEEECTTSSEEEEEECTTS----SCEEEEEETTSSCCEECCC-----SSSEEEEEEECTTSSE
T ss_pred EEeCcC---C--CCcccceEECCCCCEEEEEECCCC----CcEEEEEECCCCCEEEEec-----CCCcccCeEECCCCCE
Confidence 766521 1 111223333446665555553211 2468999998776544331 1111112222 24555
Q ss_pred EEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEee
Q 006334 194 FVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLD 272 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~ 272 (650)
+++++.... ...++++|+.+.+...+... ......+..-+++.+++++..+. ...+|.+|+.......+.
T Consensus 325 l~~~~~~~g--~~~i~~~d~~~~~~~~l~~~-----~~~~~~~~spdg~~l~~~s~~~~--~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 325 MVMVSSNGG--QQHIAKQDLATGGVQVLSST-----FLDETPSLAPNGTMVIYSSSQGM--GSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EEEEEECSS--CEEEEEEETTTCCEEECCCS-----SSCEEEEECTTSSEEEEEEEETT--EEEEEEEETTSCCEEECC
T ss_pred EEEEECcCC--ceEEEEEECCCCCEEEecCC-----CCcCCeEEcCCCCEEEEEEcCCC--ccEEEEEECCCCcEEEee
Confidence 555553321 35799999999888665421 12222222335666666664332 347999999888777664
No 46
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.12 E-value=0.8 Score=44.39 Aligned_cols=226 Identities=14% Similarity=0.067 Sum_probs=113.5
Q ss_pred CCEEEE-EccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 37 HGAVYI-FGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 37 ~~~Iyv-fGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
++.||+ .... .+.+++||..+.........+ ...-+++++. +++|||... .+.+++||+.+..
T Consensus 34 ~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~------~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 34 AGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFNG----LYQPQGLAVDGAGTVYVTDF------NNRVVTLAAGSNN 98 (270)
T ss_dssp TCCEEEEECSS-----SCEEEEECC-----EECCCCS----CCSCCCEEECTTCCEEEEET------TTEEEEECTTCSC
T ss_pred CCCEEEEccCC-----CCcEEEecCCCcccceEeeCC----cCCcceeEECCCCCEEEEcC------CCEEEEEeCCCce
Confidence 468888 4332 246888988776554432211 1122344444 567888654 2478999988775
Q ss_pred EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEE
Q 006334 115 WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRL 193 (650)
Q Consensus 115 W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~I 193 (650)
...+.. .....-..+++..+++||+.... .+.+++||..+........ ..+. .-..++.. ++.+
T Consensus 99 ~~~~~~----~~~~~p~~i~~~~~g~l~v~~~~-------~~~i~~~~~~~~~~~~~~~-~~~~---~p~~i~~~~~g~l 163 (270)
T 1rwi_B 99 QTVLPF----DGLNYPEGLAVDTQGAVYVADRG-------NNRVVKLAAGSKTQTVLPF-TGLN---DPDGVAVDNSGNV 163 (270)
T ss_dssp CEECCC----CSCSSEEEEEECTTCCEEEEEGG-------GTEEEEECTTCCSCEECCC-CSCC---SCCCEEECTTCCE
T ss_pred Eeeeec----CCcCCCcceEECCCCCEEEEECC-------CCEEEEEECCCceeEeecc-ccCC---CceeEEEeCCCCE
Confidence 544311 11122234444446788886432 2358888766554432211 1111 11223332 4678
Q ss_pred EEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCCCcEEEee
Q 006334 194 FVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLD 272 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~ 272 (650)
|+.... .+.+++||+....-...... .. ..-..++.. ++.||+.... ...+++||+....-..+.
T Consensus 164 ~v~~~~-----~~~i~~~~~~~~~~~~~~~~-~~---~~p~~i~~d~~g~l~v~~~~-----~~~v~~~~~~~~~~~~~~ 229 (270)
T 1rwi_B 164 YVTDTD-----NNRVVKLEAESNNQVVLPFT-DI---TAPWGIAVDEAGTVYVTEHN-----TNQVVKLLAGSTTSTVLP 229 (270)
T ss_dssp EEEEGG-----GTEEEEECTTTCCEEECCCS-SC---CSEEEEEECTTCCEEEEETT-----TSCEEEECTTCSCCEECC
T ss_pred EEEECC-----CCEEEEEecCCCceEeeccc-CC---CCceEEEECCCCCEEEEECC-----CCcEEEEcCCCCcceeec
Confidence 887542 25789999887664433211 11 112233333 3478887432 246899998776433322
Q ss_pred cCCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEecCC
Q 006334 273 TCGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQLGA 316 (650)
Q Consensus 273 ~~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l~~ 316 (650)
. .....-.++++. ++.|||.... .+.+.++++..
T Consensus 230 ~----~~~~~p~~i~~~~~g~l~v~~~~------~~~v~~~~~~~ 264 (270)
T 1rwi_B 230 F----TGLNTPLAVAVDSDRTVYVADRG------NDRVVKLTSLE 264 (270)
T ss_dssp C----CSCSCEEEEEECTTCCEEEEEGG------GTEEEEECCCG
T ss_pred c----CCCCCceeEEECCCCCEEEEECC------CCEEEEEcCCC
Confidence 1 111112233333 4678887542 24667776653
No 47
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.10 E-value=1.3 Score=44.99 Aligned_cols=178 Identities=13% Similarity=0.170 Sum_probs=93.9
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCccc
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESH 131 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h 131 (650)
..+.++|..+..-....... + ....++++ .+++.++.|+.+ ..+..||..+..-...- . .......
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~--~--~~~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~~-~---~~~~~v~ 168 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAG--P--VDAWTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYSL-D---TRGKFIL 168 (321)
T ss_dssp SEEEEEETTTTEEEEEEECC--T--TCCCCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEEE-E---CSSSCEE
T ss_pred CcEEEEECCCCCEEEEEeCC--C--ccEEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEEe-c---CCCceEE
Confidence 36788898877644322221 1 11122333 356777777653 35788888876543210 0 1112233
Q ss_pred EEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEE
Q 006334 132 TATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDM 210 (650)
Q Consensus 132 s~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~ 210 (650)
++....++++++.|+.+ ..+.+||+.+.+-...- . ....+ -.++... ++.+++.|+.+ ..+.+
T Consensus 169 ~~~~spdg~~lasg~~d-------g~i~iwd~~~~~~~~~~-~-~h~~~--v~~l~~spd~~~l~s~s~d-----g~i~i 232 (321)
T 3ow8_A 169 SIAYSPDGKYLASGAID-------GIINIFDIATGKLLHTL-E-GHAMP--IRSLTFSPDSQLLVTASDD-----GYIKI 232 (321)
T ss_dssp EEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEE-C-CCSSC--CCEEEECTTSCEEEEECTT-----SCEEE
T ss_pred EEEECCCCCEEEEEcCC-------CeEEEEECCCCcEEEEE-c-ccCCc--eeEEEEcCCCCEEEEEcCC-----CeEEE
Confidence 44444567788888763 35888998876543211 0 10001 1122222 46677777765 36889
Q ss_pred EECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcEE
Q 006334 211 LDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSWS 269 (650)
Q Consensus 211 yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~ 269 (650)
||+.+......- .........+.+ ++++++.|+.++ .+.+||+.+.+-.
T Consensus 233 wd~~~~~~~~~~-----~~h~~~v~~~~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 233 YDVQHANLAGTL-----SGHASWVLNVAFCPDDTHFVSSSSDK-----SVKVWDVGTRTCV 283 (321)
T ss_dssp EETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEE
T ss_pred EECCCcceeEEE-----cCCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCEEE
Confidence 998876644321 111111222222 456777776543 5888999876543
No 48
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.09 E-value=0.77 Score=47.92 Aligned_cols=218 Identities=11% Similarity=0.107 Sum_probs=106.4
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEE
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTA 133 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~ 133 (650)
.+.+||..+......-.. ......++..++.+++.|+.+ ..+..+|+....-......+ ....-.++
T Consensus 157 ~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~---~~~~v~~~ 223 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAG-----HQARVGCLSWNRHVLSSGSRS-----GAIHHHDVRIANHQIGTLQG---HSSEVCGL 223 (401)
T ss_dssp CEEEEETTTCCEEEEECC-----CSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEEEEEC---CSSCEEEE
T ss_pred eEEEEECcCCeEEEEecC-----CCCceEEEEECCCEEEEEcCC-----CCEEEEecccCcceeeEEcC---CCCCeeEE
Confidence 567777776654332211 111122233355667777654 36888888743321111111 11122333
Q ss_pred EEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCeEEEE
Q 006334 134 TLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGDIDML 211 (650)
Q Consensus 134 ~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~y 211 (650)
....++.+++.|+.+ +.+.+||+.+..-...- ... ...-.++... +..+++.||... -..+..|
T Consensus 224 ~~~~~~~~l~s~~~d-------~~v~iwd~~~~~~~~~~--~~~--~~~v~~~~~~p~~~~ll~~~~gs~---d~~i~i~ 289 (401)
T 4aez_A 224 AWRSDGLQLASGGND-------NVVQIWDARSSIPKFTK--TNH--NAAVKAVAWCPWQSNLLATGGGTM---DKQIHFW 289 (401)
T ss_dssp EECTTSSEEEEEETT-------SCEEEEETTCSSEEEEE--CCC--SSCCCEEEECTTSTTEEEEECCTT---TCEEEEE
T ss_pred EEcCCCCEEEEEeCC-------CeEEEccCCCCCccEEe--cCC--cceEEEEEECCCCCCEEEEecCCC---CCEEEEE
Confidence 444467778888763 35888998765432211 011 1111222222 346777765211 2578999
Q ss_pred ECCCCcEEEeeecCCCCCcccceEEEEE-CC-EEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE
Q 006334 212 DMNSLTWSRLAIIGSSPGVRAGHAAINI-GT-KVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT 289 (650)
Q Consensus 212 d~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~-~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~ 289 (650)
|+.+.+....-.. . ..-.+++.. ++ .+++.+|..+ ..+.+||+.+.....+.... ....+.. ++++.
T Consensus 290 d~~~~~~~~~~~~---~--~~v~~~~~s~~~~~l~~~~g~~d----g~i~v~~~~~~~~~~~~~~~-~h~~~v~-~~~~s 358 (401)
T 4aez_A 290 NAATGARVNTVDA---G--SQVTSLIWSPHSKEIMSTHGFPD----NNLSIWSYSSSGLTKQVDIP-AHDTRVL-YSALS 358 (401)
T ss_dssp ETTTCCEEEEEEC---S--SCEEEEEECSSSSEEEEEECTTT----CEEEEEEEETTEEEEEEEEE-CCSSCCC-EEEEC
T ss_pred ECCCCCEEEEEeC---C--CcEEEEEECCCCCeEEEEeecCC----CcEEEEecCCccceeEEEec-CCCCCEE-EEEEC
Confidence 9887764433211 1 111222222 33 4555545433 36889998887766653210 1112222 22333
Q ss_pred -CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 290 -GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 290 -~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
++.+++.||.+ ..+.++++.
T Consensus 359 ~dg~~l~s~~~d------g~i~iw~~~ 379 (401)
T 4aez_A 359 PDGRILSTAASD------ENLKFWRVY 379 (401)
T ss_dssp TTSSEEEEECTT------SEEEEEECC
T ss_pred CCCCEEEEEeCC------CcEEEEECC
Confidence 56677777742 356666664
No 49
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.08 E-value=1.3 Score=44.57 Aligned_cols=201 Identities=11% Similarity=0.026 Sum_probs=115.3
Q ss_pred cceEEEEEC-CEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccce
Q 006334 79 DSHSAILWG-HKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLND 157 (650)
Q Consensus 79 ~~hsa~~~~-~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~d 157 (650)
+-+.+.+.+ +.||+..|..+ .+.+.++|+.+++-... ...+...+..+++.. +++||+..-. -+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~---i~l~~~~fgeGi~~~-g~~lyv~t~~-------~~~ 87 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENI---HKMDDSYFGEGLTLL-NEKLYQVVWL-------KNI 87 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEE---EECCTTCCEEEEEEE-TTEEEEEETT-------CSE
T ss_pred CcccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEE---EecCCCcceEEEEEe-CCEEEEEEec-------CCE
Confidence 346777765 89999876321 36799999999875542 112222334455555 5899997543 257
Q ss_pred EEEEecCCCceee-ccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEE-EeeecCCCCCcc-cce
Q 006334 158 LHVLDLKTMRWAS-PAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWS-RLAIIGSSPGVR-AGH 234 (650)
Q Consensus 158 v~~yd~~t~~Wt~-i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~-~i~~~g~~P~~R-~~~ 234 (650)
+++||..+.+-.. ++ .+ .| .+..++..++++|+.-| .+.++.+|+.+.+-. .+.. +..+.+. .-.
T Consensus 88 v~viD~~t~~v~~~i~-~g-~~---~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~V-g~~~~p~~~~n 155 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFT-HQ-MK---DGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNV-KYNGHRVIRLN 155 (266)
T ss_dssp EEEEETTTTEEEEEEE-CC-SS---SCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEE
T ss_pred EEEEECCCCcEEEEEE-CC-CC---CeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEE-CCCCcccccce
Confidence 9999998764332 22 11 12 23344444577888654 368999999987643 3332 1111111 112
Q ss_pred EEEEECCEEEEEeccCCCcccCeEEEEECCCCc---EEEeecC------CCCCCCcceeEEEEE--CCeEEEEcCCCCCC
Q 006334 235 AAINIGTKVYIIGGVGDKHYYNDIWILNVSTCS---WSQLDTC------GQQPQGRFSHAAVVT--GSDIVIYGGCGEDE 303 (650)
Q Consensus 235 s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~---W~~l~~~------~~~p~~R~~hsav~~--~~~lyV~GG~~~~~ 303 (650)
.+...++++|+-- ...+++.+.|+++.+ |..+... ...+..-.-.+.++. ++.+||.|+..
T Consensus 156 ele~~dg~lyvn~-----~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~--- 227 (266)
T 2iwa_A 156 ELEYINGEVWANI-----WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW--- 227 (266)
T ss_dssp EEEEETTEEEEEE-----TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC---
T ss_pred eEEEECCEEEEec-----CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC---
Confidence 3334478888662 224689999999885 3333210 000111122455555 35799998753
Q ss_pred CCCCcEEEEecCC
Q 006334 304 RPLNELLVLQLGA 316 (650)
Q Consensus 304 ~~~~d~~~l~l~~ 316 (650)
+.++++++..
T Consensus 228 ---~~v~~i~l~~ 237 (266)
T 2iwa_A 228 ---PKLFEIKLHL 237 (266)
T ss_dssp ---SEEEEEEEEE
T ss_pred ---CeEEEEEEec
Confidence 5778887753
No 50
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.07 E-value=1.3 Score=44.00 Aligned_cols=191 Identities=10% Similarity=0.086 Sum_probs=96.5
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
+.+++.|+.+ ..+.+||..+..-...-.. . ...-.++.+ .++.+++.|+.++ .+..+|+.+.+-.
T Consensus 77 ~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~-~---~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~ 142 (312)
T 4ery_A 77 SNLLVSASDD-----KTLKIWDVSSGKCLKTLKG-H---SNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTGKCL 142 (312)
T ss_dssp SSEEEEEETT-----SEEEEEETTTCCEEEEEEC-C---SSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEE
T ss_pred CCEEEEECCC-----CEEEEEECCCCcEEEEEcC-C---CCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCEEE
Confidence 4455555532 3678888887654332111 0 011112222 2566777777644 5888999877643
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEE
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLF 194 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iy 194 (650)
..- . . ....-.++....++.+++.|+.+ ..+.+||+.+.+....... . .......+.+ ++..+
T Consensus 143 ~~~-~-~--~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~wd~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~l 207 (312)
T 4ery_A 143 KTL-P-A--HSDPVSAVHFNRDGSLIVSSSYD-------GLCRIWDTASGQCLKTLID-D---DNPPVSFVKFSPNGKYI 207 (312)
T ss_dssp EEE-C-C--CSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCEEEEECC-S---SCCCEEEEEECTTSSEE
T ss_pred EEe-c-C--CCCcEEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCceeeEEec-c---CCCceEEEEECCCCCEE
Confidence 321 0 1 11112233333456777888763 2588899877654321100 0 0011112222 45666
Q ss_pred EEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 195 VYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 195 v~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
+.|+.+ +.+..||+.+.+-...-. +............. .++.+++.|+.+ ..+.+||+.+..-
T Consensus 208 ~~~~~d-----~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~ 271 (312)
T 4ery_A 208 LAATLD-----NTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVSGSED-----NLVYIWNLQTKEI 271 (312)
T ss_dssp EEEETT-----TEEEEEETTTTEEEEEEC-SSCCSSSCCCEEEECSSSCEEEECCTT-----SCEEEEETTTCCE
T ss_pred EEEcCC-----CeEEEEECCCCcEEEEEE-ecCCceEEEEEEEEeCCCcEEEEECCC-----CEEEEEECCCchh
Confidence 666654 478999988775433221 11111111112222 345677777654 3588999987753
No 51
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.03 E-value=0.58 Score=52.85 Aligned_cols=194 Identities=10% Similarity=0.057 Sum_probs=97.7
Q ss_pred cCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC-ceeeccccCCCCCC
Q 006334 102 VNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM-RWASPAVKGDIPVP 180 (650)
Q Consensus 102 ~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~-~Wt~i~~~~~lP~~ 180 (650)
...++++|+.+.+...+... ..............+++.++++..+. ......++++|+.+. .+..+..... ...
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~--~~~~~~v~~~d~~~g~~~~~~~~~~~-~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTG--EPKEKFLTNLSWSPDENILYVAEVNR--AQNECKVNAYDAETGRFVRTLFVETD-KHY 308 (706)
T ss_dssp EEEEEEEETTTTEEEECCCC--SCTTCEEEEEEECTTSSEEEEEEECT--TSCEEEEEEEETTTCCEEEEEEEEEC-SSC
T ss_pred eeEEEEEECCCCceEeeccC--CCCceeEeeEEEECCCCEEEEEEeCC--CCCeeEEEEEECCCCceeeEEEEccC-CCe
Confidence 36799999998876654211 11112222334445666555554422 122457899999887 6654431111 000
Q ss_pred C-Ccceeee-e--cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECC-EEEEEeccCCCccc
Q 006334 181 R-DSHSSNV-I--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGT-KVYIIGGVGDKHYY 255 (650)
Q Consensus 181 R-~~hs~v~-~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~-~IyI~GG~~~~~~~ 255 (650)
. ....+.. - ++++++.+..++ ...+|.+|........+.. -........+..-++ .||+.+ ..+....
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~---~~~~v~~~~~~spdg~~l~~~~-~~~~~~~ 381 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTK---GEWEVTNFAGFDPKGTRLYFES-TEASPLE 381 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCC---SSSCEEEEEEECTTSSEEEEEE-SSSCTTC
T ss_pred ECccCCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCC---CCeEEEeeeEEcCCCCEEEEEe-cCCCCce
Confidence 0 0012222 2 567655554432 3678999977777766641 111111111122234 455554 3333234
Q ss_pred CeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 256 NDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 256 ~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
..+|.+|+.+.....+.. ....+.+.+. +++.+++..... ....+++++++.
T Consensus 382 ~~l~~~d~~~~~~~~l~~------~~~~~~~~~spdg~~l~~~~~~~--~~p~~i~l~d~~ 434 (706)
T 2z3z_A 382 RHFYCIDIKGGKTKDLTP------ESGMHRTQLSPDGSAIIDIFQSP--TVPRKVTVTNIG 434 (706)
T ss_dssp BEEEEEETTCCCCEESCC------SSSEEEEEECTTSSEEEEEEECS--SCSCEEEEEESS
T ss_pred EEEEEEEcCCCCceeccC------CCceEEEEECCCCCEEEEEecCC--CCCcEEEEEECC
Confidence 589999998887666542 1112333333 566666654322 123567777765
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.97 E-value=0.51 Score=46.90 Aligned_cols=226 Identities=14% Similarity=0.039 Sum_probs=113.8
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcE----EEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVW----STLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLE 111 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW----~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~ 111 (650)
++.+++.|+ + ..+.+||..+... ..+... .....-.++.+. ++++++.|+.+ ..+..||+.
T Consensus 62 ~~~~l~~~~-d-----g~i~iw~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~ 127 (337)
T 1gxr_A 62 PTRHVYTGG-K-----GCVKVWDISHPGNKSPVSQLDCL---NRDNYIRSCKLLPDGCTLIVGGEA-----STLSIWDLA 127 (337)
T ss_dssp SSSEEEEEC-B-----SEEEEEETTSTTCCSCSEEEECS---CTTSBEEEEEECTTSSEEEEEESS-----SEEEEEECC
T ss_pred CCcEEEEcC-C-----CeEEEEECCCCCceeeeeccccc---CCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEEECC
Confidence 455666665 3 4688889876542 111111 111112223333 56677777653 368899998
Q ss_pred CCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-c
Q 006334 112 SKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-A 190 (650)
Q Consensus 112 t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~ 190 (650)
+.++........ .......+....++.+++.|+.+ ..+.+||+.+.+....- ... ...-.++... +
T Consensus 128 ~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d-------g~v~~~d~~~~~~~~~~---~~~-~~~i~~~~~~~~ 194 (337)
T 1gxr_A 128 APTPRIKAELTS--SAPACYALAISPDSKVCFSCCSD-------GNIAVWDLHNQTLVRQF---QGH-TDGASCIDISND 194 (337)
T ss_dssp CC--EEEEEEEC--SSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEE---CCC-SSCEEEEEECTT
T ss_pred CCCcceeeeccc--CCCceEEEEECCCCCEEEEEeCC-------CcEEEEeCCCCceeeee---ecc-cCceEEEEECCC
Confidence 877543211111 11112233334466777777753 35888998876544321 111 1111122222 4
Q ss_pred CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCcccCeEEEEECCCCcEE
Q 006334 191 NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKHYYNDIWILNVSTCSWS 269 (650)
Q Consensus 191 ~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~ 269 (650)
+..++.|+.+ ..+..||+.+.+-..... .+ ..-.+++. .+++++++|+.+ ..+.+||+.+..-.
T Consensus 195 ~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~---~~--~~v~~~~~s~~~~~l~~~~~~-----~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 195 GTKLWTGGLD-----NTVRSWDLREGRQLQQHD---FT--SQIFSLGYCPTGEWLAVGMES-----SNVEVLHVNKPDKY 259 (337)
T ss_dssp SSEEEEEETT-----SEEEEEETTTTEEEEEEE---CS--SCEEEEEECTTSSEEEEEETT-----SCEEEEETTSSCEE
T ss_pred CCEEEEEecC-----CcEEEEECCCCceEeeec---CC--CceEEEEECCCCCEEEEEcCC-----CcEEEEECCCCCeE
Confidence 5666777654 478999998776443321 11 11122222 245677776643 35899999887644
Q ss_pred EeecCCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 270 QLDTCGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 270 ~l~~~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
.+.. . ...-.++.+. ++++++.|+.+ ..+.++++.
T Consensus 260 ~~~~----~-~~~v~~~~~~~~~~~l~~~~~d------g~i~~~~~~ 295 (337)
T 1gxr_A 260 QLHL----H-ESCVLSLKFAYCGKWFVSTGKD------NLLNAWRTP 295 (337)
T ss_dssp EECC----C-SSCEEEEEECTTSSEEEEEETT------SEEEEEETT
T ss_pred EEcC----C-ccceeEEEECCCCCEEEEecCC------CcEEEEECC
Confidence 3321 1 1111223333 46677777642 356667665
No 53
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.91 E-value=1.2 Score=50.81 Aligned_cols=217 Identities=11% Similarity=0.050 Sum_probs=114.3
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCC-----------cCcCe
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGY-----------KKVND 104 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~-----------~~~nd 104 (650)
+++.+.|+....+.....++++|+.++......... ... ..++.. +++.++++..... .....
T Consensus 135 Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~----~~~-~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (710)
T 2xdw_A 135 DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER----VKF-SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQK 209 (710)
T ss_dssp TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE----ECS-CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCE
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC----ccc-ceEEEEeCCCEEEEEEECCccccccccccccCCCCE
Confidence 455555554333333348999999999887643221 111 223333 6666666655433 23467
Q ss_pred EEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCC------C--ceeeccccCC
Q 006334 105 LHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKT------M--RWASPAVKGD 176 (650)
Q Consensus 105 v~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t------~--~Wt~i~~~~~ 176 (650)
+|++++.+.......+......+..........+++.+++..... ....++++++|+.+ . .|..+..
T Consensus 210 v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~--- 284 (710)
T 2xdw_A 210 LYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREG--CDPVNRLWYCDLQQESNGITGILKWVKLID--- 284 (710)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECS--SSSCCEEEEEEGGGSSSSSCSSCCCEEEEC---
T ss_pred EEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEcc--CCCccEEEEEECcccccccCCccceEEeeC---
Confidence 999999887632111111111233333444455666555544311 11246899999876 4 5666541
Q ss_pred CCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCC---cEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCC
Q 006334 177 IPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSL---TWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDK 252 (650)
Q Consensus 177 lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~---~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~ 252 (650)
.... ........++.||+.+... .....++.+|+.+. .|..+... . ....-..+... ++++++....+.
T Consensus 285 ~~~~-~~~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~lv~~~~~~g- 357 (710)
T 2xdw_A 285 NFEG-EYDYVTNEGTVFTFKTNRH--SPNYRLINIDFTDPEESKWKVLVPE--H-EKDVLEWVACVRSNFLVLCYLHDV- 357 (710)
T ss_dssp SSSS-CEEEEEEETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEECC--C-SSCEEEEEEEETTTEEEEEEEETT-
T ss_pred CCCc-EEEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCCcccceeccCC--C-CCCeEEEEEEEcCCEEEEEEEECC-
Confidence 1111 1111222356788776533 23467999999876 58887621 1 11122233444 667777754332
Q ss_pred cccCeEEEEECCCCc-EEEee
Q 006334 253 HYYNDIWILNVSTCS-WSQLD 272 (650)
Q Consensus 253 ~~~~dv~~yD~~t~~-W~~l~ 272 (650)
...++++|+.+++ ...+.
T Consensus 358 --~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 358 --KNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp --EEEEEEEETTTCCEEEEEC
T ss_pred --EEEEEEEECCCCCEEEecC
Confidence 3579999996554 45453
No 54
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.81 E-value=1.6 Score=43.89 Aligned_cols=199 Identities=9% Similarity=-0.005 Sum_probs=114.0
Q ss_pred eEEEEEC-CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEE
Q 006334 31 HSACYSH-GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILD 109 (650)
Q Consensus 31 hs~v~~~-~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD 109 (650)
+.+.+.+ +.||+-.|.. ..+.+.++|+.+++-...... +...+...++..+++||+..- ..+.+++||
T Consensus 24 ~Gl~~~~dg~Lyvstg~~---~~s~v~~iD~~tg~v~~~i~l---~~~~fgeGi~~~g~~lyv~t~-----~~~~v~viD 92 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY---GRSSVRQVALQTGKVENIHKM---DDSYFGEGLTLLNEKLYQVVW-----LKNIGFIYD 92 (266)
T ss_dssp EEEEECSTTEEEEEECST---TTCEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEET-----TCSEEEEEE
T ss_pred ccEEEeCCCeEEEECCCC---CCCEEEEEECCCCCEEEEEec---CCCcceEEEEEeCCEEEEEEe-----cCCEEEEEE
Confidence 4555555 8999977632 236799999999875543333 223455677778999999753 346899999
Q ss_pred CCCCcEEe-eecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceee-ccccCCCCCCC-Cccee
Q 006334 110 LESKEWMR-PECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-PAVKGDIPVPR-DSHSS 186 (650)
Q Consensus 110 ~~t~~W~~-l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-i~~~~~lP~~R-~~hs~ 186 (650)
+.+.+-.. ++. + .+ .+.+++. ..+++|+.-| .+.++.+|+++.+-.. +. .+..+.+. .-..+
T Consensus 93 ~~t~~v~~~i~~-g-~~---~g~glt~-Dg~~l~vs~g--------s~~l~viD~~t~~v~~~I~-Vg~~~~p~~~~nel 157 (266)
T 2iwa_A 93 RRTLSNIKNFTH-Q-MK---DGWGLAT-DGKILYGSDG--------TSILYEIDPHTFKLIKKHN-VKYNGHRVIRLNEL 157 (266)
T ss_dssp TTTTEEEEEEEC-C-SS---SCCEEEE-CSSSEEEECS--------SSEEEEECTTTCCEEEEEE-CEETTEECCCEEEE
T ss_pred CCCCcEEEEEEC-C-CC---CeEEEEE-CCCEEEEECC--------CCeEEEEECCCCcEEEEEE-ECCCCcccccceeE
Confidence 98875332 211 1 12 2333333 2467887643 2579999998865433 22 11111121 11233
Q ss_pred eeecCEEEEEeccCCCCccCeEEEEECCCCcEEE-eeecCC--------CCCcccceEEEEE--CCEEEEEeccCCCccc
Q 006334 187 NVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR-LAIIGS--------SPGVRAGHAAINI--GTKVYIIGGVGDKHYY 255 (650)
Q Consensus 187 v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~-i~~~g~--------~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~ 255 (650)
...++++|+--.. .+++.+.|+.+++-.. +...+. .+..-.-...+.. ++++||.|+.+
T Consensus 158 e~~dg~lyvn~~~-----~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~----- 227 (266)
T 2iwa_A 158 EYINGEVWANIWQ-----TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW----- 227 (266)
T ss_dssp EEETTEEEEEETT-----SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC-----
T ss_pred EEECCEEEEecCC-----CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC-----
Confidence 3447888865332 3689999999886433 221110 0100111333443 35899998764
Q ss_pred CeEEEEECCC
Q 006334 256 NDIWILNVST 265 (650)
Q Consensus 256 ~dv~~yD~~t 265 (650)
+.+++.++..
T Consensus 228 ~~v~~i~l~~ 237 (266)
T 2iwa_A 228 PKLFEIKLHL 237 (266)
T ss_dssp SEEEEEEEEE
T ss_pred CeEEEEEEec
Confidence 5677776654
No 55
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.76 E-value=2.5 Score=44.63 Aligned_cols=149 Identities=11% Similarity=0.098 Sum_probs=85.2
Q ss_pred ECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCC
Q 006334 86 WGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKT 165 (650)
Q Consensus 86 ~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t 165 (650)
.++.+++.|+.++ .+..||+.+.+-...- . .....-.++....++..++.|+.+ ..+.+||+.+
T Consensus 278 ~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~sg~~d-------g~i~vwd~~~ 341 (464)
T 3v7d_B 278 GHGNIVVSGSYDN-----TLIVWDVAQMKCLYIL-S---GHTDRIYSTIYDHERKRCISASMD-------TTIRIWDLEN 341 (464)
T ss_dssp EETTEEEEEETTS-----CEEEEETTTTEEEEEE-C---CCSSCEEEEEEETTTTEEEEEETT-------SCEEEEETTT
T ss_pred CCCCEEEEEeCCC-----eEEEEECCCCcEEEEe-c---CCCCCEEEEEEcCCCCEEEEEeCC-------CcEEEEECCC
Confidence 3455666676543 5888998876543321 1 111223344445566777777763 3588899877
Q ss_pred CceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEE
Q 006334 166 MRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYI 245 (650)
Q Consensus 166 ~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI 245 (650)
.+-... +......-..+.+++..++.|+.+ ..+.+||+.+..-..... ........+...++++++
T Consensus 342 ~~~~~~-----~~~h~~~v~~~~~~~~~l~s~s~d-----g~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~ 407 (464)
T 3v7d_B 342 GELMYT-----LQGHTALVGLLRLSDKFLVSAAAD-----GSIRGWDANDYSRKFSYH----HTNLSAITTFYVSDNILV 407 (464)
T ss_dssp TEEEEE-----ECCCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCEEEEEE----CTTCCCEEEEEECSSEEE
T ss_pred CcEEEE-----EeCCCCcEEEEEEcCCEEEEEeCC-----CcEEEEECCCCceeeeec----CCCCccEEEEEeCCCEEE
Confidence 653321 111112223344556777777755 478899988765332221 111233344556677777
Q ss_pred EeccCCCcccCeEEEEECCCCcEEE
Q 006334 246 IGGVGDKHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 246 ~GG~~~~~~~~dv~~yD~~t~~W~~ 270 (650)
.|+ + ..+.+||+++.+-..
T Consensus 408 ~~~-d-----g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 408 SGS-E-----NQFNIYNLRSGKLVH 426 (464)
T ss_dssp EEE-T-----TEEEEEETTTCCEEE
T ss_pred Eec-C-----CeEEEEECCCCcEEe
Confidence 776 2 479999999887654
No 56
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.70 E-value=0.42 Score=46.23 Aligned_cols=203 Identities=10% Similarity=0.017 Sum_probs=103.9
Q ss_pred CCEEEEEccCCCCcccceEEEEECCC-CcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDT-MVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t-~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++..+++++ ...++++|..+ .....+.... ............+++.+++++.... ....+|.+|..+...
T Consensus 52 dg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~ 122 (297)
T 2ojh_A 52 DGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGF--ATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGGTP 122 (297)
T ss_dssp TSSEEEEEE------TTEEEEEESSSCCSCEECCCTT--CCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCCCC
T ss_pred CCCEEEEEc------CCeEEEEeCCCCCCceEecccc--ccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCCce
Confidence 355555554 24799999998 7766554321 1112222233336666666664322 356899999988775
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCE-EEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCE-
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDK-MVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANR- 192 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~-Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~- 192 (650)
..+... .. ........+++ |++.++.+ . ...+|.+|..+.....+. ... .....+... ++.
T Consensus 123 ~~~~~~----~~--~~~~~~spdg~~l~~~~~~~---~--~~~l~~~~~~~~~~~~~~---~~~--~~~~~~~~s~dg~~ 186 (297)
T 2ojh_A 123 RLMTKN----LP--SYWHGWSPDGKSFTYCGIRD---Q--VFDIYSMDIDSGVETRLT---HGE--GRNDGPDYSPDGRW 186 (297)
T ss_dssp EECCSS----SS--EEEEEECTTSSEEEEEEEET---T--EEEEEEEETTTCCEEECC---CSS--SCEEEEEECTTSSE
T ss_pred EEeecC----CC--ccceEECCCCCEEEEEECCC---C--ceEEEEEECCCCcceEcc---cCC--CccccceECCCCCE
Confidence 554211 11 22333334555 44444432 1 136777777776665443 111 111122222 444
Q ss_pred EEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCc------ccCeEEEEECCC
Q 006334 193 LFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKH------YYNDIWILNVST 265 (650)
Q Consensus 193 Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~------~~~dv~~yD~~t 265 (650)
|++.+..++ ...+|.++........+.. .. .....+.. .+++.+++++..... ....+++||+.+
T Consensus 187 l~~~~~~~~---~~~i~~~~~~~~~~~~~~~---~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 187 IYFNSSRTG---QMQIWRVRVDGSSVERITD---SA--YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp EEEEECTTS---SCEEEEEETTSSCEEECCC---CS--EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred EEEEecCCC---CccEEEECCCCCCcEEEec---CC--cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 444433232 3578888887777766541 11 11112222 245555555443211 235699999998
Q ss_pred CcEEEee
Q 006334 266 CSWSQLD 272 (650)
Q Consensus 266 ~~W~~l~ 272 (650)
.+...+.
T Consensus 259 ~~~~~~~ 265 (297)
T 2ojh_A 259 GNVETLF 265 (297)
T ss_dssp CSCEEEE
T ss_pred CCceeee
Confidence 8766554
No 57
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.69 E-value=0.2 Score=57.95 Aligned_cols=211 Identities=8% Similarity=0.021 Sum_probs=109.9
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccE
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHT 132 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs 132 (650)
-+++||+.+..+.........+. ..-.+++.. ++.||| |.. ...+++||+.+++++.+... ......-.+
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~d~~g~lWi-gt~-----~~Gl~~~~~~~~~~~~~~~~--~~~~~~v~~ 454 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELLS-NSVLCSLKDSEGNLWF-GTY-----LGNISYYNTRLKKFQIIELE--KNELLDVRV 454 (781)
T ss_dssp CEEEEETTEEEEECC-----CCC-SBEEEEEECTTSCEEE-EET-----TEEEEEECSSSCEEEECCST--TTCCCCEEE
T ss_pred cEEEEECCCCeEEEccCCCCCCC-cceEEEEECCCCCEEE-Eec-----cCCEEEEcCCCCcEEEeccC--CCCCCeEEE
Confidence 37777877666654421101111 111223332 577887 322 14689999999998876321 111122233
Q ss_pred EEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCC-cceeeee-cCEEEEEeccCCCCccCeEEE
Q 006334 133 ATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRD-SHSSNVI-ANRLFVYGGDCGDQYHGDIDM 210 (650)
Q Consensus 133 ~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~-~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~ 210 (650)
++...++.|+|-. . +-+++||+.+++|.............. -.+++.. ++.|++..- .+.+++
T Consensus 455 i~~d~~g~lwigt-~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~------~~Gl~~ 519 (781)
T 3v9f_A 455 FYEDKNKKIWIGT-H--------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF------GGGVGI 519 (781)
T ss_dssp EEECTTSEEEEEE-T--------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES------SSCEEE
T ss_pred EEECCCCCEEEEE-C--------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc------CCCEEE
Confidence 3333457777732 1 248899999988876542111111111 1122211 466776431 135899
Q ss_pred EECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCcccCeE-EEEECCCCcEEEeecCCCCCCCcceeEEEE
Q 006334 211 LDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKHYYNDI-WILNVSTCSWSQLDTCGQQPQGRFSHAAVV 288 (650)
Q Consensus 211 yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~~~~dv-~~yD~~t~~W~~l~~~~~~p~~R~~hsav~ 288 (650)
||+.+.+|..+.....++.... .+++. .++.|++... .-+ ++||+.++++..+.....++.... .+++.
T Consensus 520 ~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~ 590 (781)
T 3v9f_A 520 YTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISE 590 (781)
T ss_dssp ECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEE
T ss_pred EeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEE
Confidence 9999999988763222222221 22222 2457777531 346 899999998888764322343333 23333
Q ss_pred E-CCeEEEEc
Q 006334 289 T-GSDIVIYG 297 (650)
Q Consensus 289 ~-~~~lyV~G 297 (650)
. ++.|++.+
T Consensus 591 d~~g~lW~~t 600 (781)
T 3v9f_A 591 DKNGNIWAST 600 (781)
T ss_dssp CSSSCEEEEC
T ss_pred CCCCCEEEEc
Confidence 3 46677764
No 58
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.68 E-value=0.66 Score=52.65 Aligned_cols=215 Identities=12% Similarity=0.051 Sum_probs=109.8
Q ss_pred CCEEEEEccC-CCCcccceEEEEECCCCcEEEeecCCCCC-C--------------CC------cceEEEEECCEEEEEc
Q 006334 37 HGAVYIFGGC-CGGLHFGDVLMLNLDTMVWSTLATTGQGP-G--------------PR------DSHSAILWGHKMIVFG 94 (650)
Q Consensus 37 ~~~IyvfGG~-~~~~~~~dv~~yD~~t~sW~~l~~~g~~P-~--------------pR------~~hsa~~~~~~lyVfG 94 (650)
++..+++++. ++......++++|..+++...+....... . .| ....+..-+++.++++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 4565666654 43333458999999998887664321100 0 00 1122223366666666
Q ss_pred ccCCCcCcCeEEEEECCCC---cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeec
Q 006334 95 GTNGYKKVNDLHILDLESK---EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASP 171 (650)
Q Consensus 95 G~~~~~~~ndv~~yD~~t~---~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i 171 (650)
.. ..++++|+.+. ....+.. ............+++.++++.. +.++++|+.++....+
T Consensus 127 ~~------~~i~~~d~~~~~~~~~~~l~~-----~~~~~~~~~~SPDG~~la~~~~--------~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 127 LG------GELYLYDLKQEGKAAVRQLTH-----GEGFATDAKLSPKGGFVSFIRG--------RNLWVIDLASGRQMQL 187 (741)
T ss_dssp ET------TEEEEEESSSCSTTSCCBCCC-----SSSCEEEEEECTTSSEEEEEET--------TEEEEEETTTTEEEEC
T ss_pred eC------CcEEEEECCCCCcceEEEccc-----CCcccccccCCCCCCEEEEEeC--------CcEEEEecCCCCEEEe
Confidence 53 78999999887 5444311 1122233444456776666542 2699999988877655
Q ss_pred cccCCCCC--CC---------Ccceeeee--cCEEEEEeccCCCC----------------------------ccCeEEE
Q 006334 172 AVKGDIPV--PR---------DSHSSNVI--ANRLFVYGGDCGDQ----------------------------YHGDIDM 210 (650)
Q Consensus 172 ~~~~~lP~--~R---------~~hs~v~~--~~~Iyv~GG~~~~~----------------------------~~n~v~~ 210 (650)
...+.... .. .....+.+ +++.++++..+... ....++.
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 42211000 00 00111222 44444444322210 1227888
Q ss_pred EECCC-CcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEee
Q 006334 211 LDMNS-LTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLD 272 (650)
Q Consensus 211 yd~~t-~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~ 272 (650)
+|+.+ .+-..+... ............ -+++.++++..+......+++.+|+.+.+...+.
T Consensus 268 ~d~~~~~~~~~~~~~-~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLG-KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp ECSSTTCCCEEECCC-SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred EECCCCCceEEecCC-CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 89887 765554311 001111122223 4444444444333334568999999998877664
No 59
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.65 E-value=1.6 Score=43.45 Aligned_cols=198 Identities=10% Similarity=0.080 Sum_probs=90.7
Q ss_pred CEEEEEccCCCCcccceEEEEECC-CCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECC--CC
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLD-TMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLE--SK 113 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~-t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~--t~ 113 (650)
..+|+.++. .+.+++||.. +.++..+..... ...-..+++. +++.+++++... ..+.+|++. +.
T Consensus 5 ~~l~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~~~~~~----~~v~~~~~~~~~~ 72 (343)
T 1ri6_A 5 QTVYIASPE-----SQQIHVWNLNHEGALTLTQVVDV---PGQVQPMVVSPDKRYLYVGVRPE----FRVLAYRIAPDDG 72 (343)
T ss_dssp EEEEEEEGG-----GTEEEEEEECTTSCEEEEEEEEC---SSCCCCEEECTTSSEEEEEETTT----TEEEEEEECTTTC
T ss_pred EEEEEeCCC-----CCeEEEEEECCCCcEEEeeeEec---CCCCceEEECCCCCEEEEeecCC----CeEEEEEecCCCC
Confidence 456665442 3467888774 455554433211 1112223332 454333444322 467777766 67
Q ss_pred cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC-ceeeccccCCCCCCCCcceeeee--c
Q 006334 114 EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM-RWASPAVKGDIPVPRDSHSSNVI--A 190 (650)
Q Consensus 114 ~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~-~Wt~i~~~~~lP~~R~~hs~v~~--~ 190 (650)
+++.+..... ...-..++...+++.+++++..+ +.+.+||+... ....+.. .+....-+.++.. +
T Consensus 73 ~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~s~dg 140 (343)
T 1ri6_A 73 ALTFAAESAL---PGSLTHISTDHQGQFVFVGSYNA------GNVSVTRLEDGLPVGVVDV---VEGLDGCHSANISPDN 140 (343)
T ss_dssp CEEEEEEEEC---SSCCSEEEECTTSSEEEEEETTT------TEEEEEEEETTEEEEEEEE---ECCCTTBCCCEECTTS
T ss_pred ceeecccccc---CCCCcEEEEcCCCCEEEEEecCC------CeEEEEECCCCcccccccc---ccCCCCceEEEECCCC
Confidence 7765522111 11223444444555444444321 35778887422 1222221 1111112233333 3
Q ss_pred CEEEEEeccCCCCccCeEEEEECCC-CcEEEee--ecCCCCCcccceEEEEE-CC-EEEEEeccCCCcccCeEEEEECC-
Q 006334 191 NRLFVYGGDCGDQYHGDIDMLDMNS-LTWSRLA--IIGSSPGVRAGHAAINI-GT-KVYIIGGVGDKHYYNDIWILNVS- 264 (650)
Q Consensus 191 ~~Iyv~GG~~~~~~~n~v~~yd~~t-~~W~~i~--~~g~~P~~R~~~s~v~~-~~-~IyI~GG~~~~~~~~dv~~yD~~- 264 (650)
+.+|+.+..+ +.+.+||+.+ .++..+. .. ..+....-..++.. ++ .+|+.+.. ...+.+||+.
T Consensus 141 ~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pdg~~l~~~~~~-----~~~i~~~~~~~ 209 (343)
T 1ri6_A 141 RTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEV-TTVEGAGPRHMVFHPNEQYAYCVNEL-----NSSVDVWELKD 209 (343)
T ss_dssp SEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEE-ECSTTCCEEEEEECTTSSEEEEEETT-----TTEEEEEESSC
T ss_pred CEEEEecCCC-----CEEEEEEecCCCceeeeccccc-ccCCCCCcceEEECCCCCEEEEEeCC-----CCEEEEEEecC
Confidence 4577665322 4789999887 6665433 11 11111111122222 34 46666532 2468888884
Q ss_pred -CCcEEE
Q 006334 265 -TCSWSQ 270 (650)
Q Consensus 265 -t~~W~~ 270 (650)
+..+..
T Consensus 210 ~~g~~~~ 216 (343)
T 1ri6_A 210 PHGNIEC 216 (343)
T ss_dssp TTSCCEE
T ss_pred CCCcEEE
Confidence 455543
No 60
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.65 E-value=1.1 Score=44.93 Aligned_cols=161 Identities=16% Similarity=0.138 Sum_probs=79.9
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CC-EEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GH-KMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
++.+|+.++. .+.++++|+.+++....-..+. ...-+.+++. ++ .+|+.+.. ...+++||+.+.+
T Consensus 10 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 10 GHEYMIVTNY-----PNNLHVVDVASDTVYKSCVMPD---KFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCK 76 (349)
T ss_dssp TCEEEEEEET-----TTEEEEEETTTTEEEEEEECSS---CCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTE
T ss_pred CCEEEEEeCC-----CCeEEEEECCCCcEEEEEecCC---CCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCc
Confidence 5677887764 3579999999887654333211 0012333433 44 57776532 2579999999876
Q ss_pred EEeeecCCCCCC--CCcccEEEEEcCCEEEEEcccc--CCCCcc---cceEEEEecCCCceeeccccCCCCCCCCcceee
Q 006334 115 WMRPECRGAPPS--PRESHTATLVGDDKMVIFGGSG--EGEANY---LNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSN 187 (650)
Q Consensus 115 W~~l~~~~~~P~--~R~~hs~~~~~~~~Lyv~GG~~--~~~~~~---~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v 187 (650)
....-.....+. ...-..+++..+++.+++++.+ .....+ .+.+++||+.+++-..... ....++.-.++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~ 154 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR--TFPMPRQVYLMR 154 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE--EEECCSSCCCEE
T ss_pred EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceee--eccCCCccccee
Confidence 543211111110 1112334444455544444421 000001 2579999988744222110 111122222222
Q ss_pred e-ecCEEEEEeccCCCCccCeEEEEECCCCcEEE
Q 006334 188 V-IANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR 220 (650)
Q Consensus 188 ~-~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~ 220 (650)
. -++++|+.++ ++++||+.+.+...
T Consensus 155 ~s~dg~l~~~~~--------~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 155 AADDGSLYVAGP--------DIYKMDVKTGKYTV 180 (349)
T ss_dssp ECTTSCEEEESS--------SEEEECTTTCCEEE
T ss_pred ECCCCcEEEccC--------cEEEEeCCCCceec
Confidence 2 2456777432 48888887766443
No 61
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.64 E-value=1.3 Score=44.35 Aligned_cols=199 Identities=9% Similarity=0.030 Sum_probs=98.6
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.+++.|+.+ ..+.+||..+......-.. . ...-.++.+. +++.++.|+.+ ..+.+||+.+.+.
T Consensus 43 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~-h---~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~ 108 (369)
T 3zwl_B 43 EGDLLFSCSKD-----SSASVWYSLNGERLGTLDG-H---TGTIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSNGQC 108 (369)
T ss_dssp TSCEEEEEESS-----SCEEEEETTTCCEEEEECC-C---SSCEEEEEECTTSSEEEEEETT-----TEEEEEETTTCCE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCchhhhhhhh-c---CCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 45666667643 3688999887764433211 0 1111223332 56677777654 3688999988765
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCce----eeccccC--CCC--CCCCcceee
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRW----ASPAVKG--DIP--VPRDSHSSN 187 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~W----t~i~~~~--~lP--~~R~~hs~v 187 (650)
...-. ....-..+....++..+++++.+. ......+.+||+.+..- ....... .+. ........+
T Consensus 109 ~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~--~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 109 VATWK-----SPVPVKRVEFSPCGNYFLAILDNV--MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp EEEEE-----CSSCEEEEEECTTSSEEEEEECCB--TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred EEEee-----cCCCeEEEEEccCCCEEEEecCCc--cCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 44311 112233344444566666665421 11224677777754321 1110000 000 000011222
Q ss_pred ee--cCEEEEEeccCCCCccCeEEEEECCC-CcEE-EeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEE
Q 006334 188 VI--ANRLFVYGGDCGDQYHGDIDMLDMNS-LTWS-RLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILN 262 (650)
Q Consensus 188 ~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t-~~W~-~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD 262 (650)
.+ ++.+++.|+.+ ..+..||+.+ ..-. .+.. .. ..-.+++.. ++.+++.|+.+ ..+.+||
T Consensus 182 ~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~----~~-~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d 246 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKD-----GKISKYDVSNNYEYVDSIDL----HE-KSISDMQFSPDLTYFITSSRD-----TNSFLVD 246 (369)
T ss_dssp EECGGGCEEEEEETT-----SEEEEEETTTTTEEEEEEEC----CS-SCEEEEEECTTSSEEEEEETT-----SEEEEEE
T ss_pred EEcCCCCEEEEEcCC-----CEEEEEECCCCcEeEEEEec----CC-CceeEEEECCCCCEEEEecCC-----ceEEEEE
Confidence 22 45566666654 4789999987 3322 2221 11 111222222 45666666543 3689999
Q ss_pred CCCCcEEEe
Q 006334 263 VSTCSWSQL 271 (650)
Q Consensus 263 ~~t~~W~~l 271 (650)
+.+......
T Consensus 247 ~~~~~~~~~ 255 (369)
T 3zwl_B 247 VSTLQVLKK 255 (369)
T ss_dssp TTTCCEEEE
T ss_pred CCCCceeee
Confidence 988765443
No 62
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.59 E-value=1.2 Score=44.20 Aligned_cols=245 Identities=10% Similarity=0.051 Sum_probs=118.5
Q ss_pred CCEEEEEccCC--CCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-C-CEEEEEcccCCCcCcCeEEEEECCC
Q 006334 37 HGAVYIFGGCC--GGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-G-HKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 37 ~~~IyvfGG~~--~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~-~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
++.||+..... .......+++||+.++++..+...........-+++++. + ++|||.... +.+++||+.
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~- 100 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD- 100 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-
Confidence 57888871100 011235699999988888765431000001112334433 5 788886542 369999998
Q ss_pred CcEEee-ecCCCCCCCCcccEEEEEcCCEEEEEccccC--------CCCcccceEEEEecCCCceeeccccCCCCCCCCc
Q 006334 113 KEWMRP-ECRGAPPSPRESHTATLVGDDKMVIFGGSGE--------GEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDS 183 (650)
Q Consensus 113 ~~W~~l-~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~--------~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~ 183 (650)
.+...+ ...........-..++...++.+|+...... ........+++||+. .+...+.. ... ..
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~---~~ 174 (314)
T 1pjx_A 101 GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQ---FP 174 (314)
T ss_dssp SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EES---SE
T ss_pred CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CCC---Cc
Confidence 776554 2111111112234455555678887643210 001112568899876 55543321 111 11
Q ss_pred ceeeee-----cC-EEEEEeccCCCCccCeEEEEECC-CCcEEEeeecCCCCCc--ccceEEEEE-CCEEEEEeccCCCc
Q 006334 184 HSSNVI-----AN-RLFVYGGDCGDQYHGDIDMLDMN-SLTWSRLAIIGSSPGV--RAGHAAINI-GTKVYIIGGVGDKH 253 (650)
Q Consensus 184 hs~v~~-----~~-~Iyv~GG~~~~~~~n~v~~yd~~-t~~W~~i~~~g~~P~~--R~~~s~v~~-~~~IyI~GG~~~~~ 253 (650)
..++.. ++ .+|+.... .+.+++||+. +.++.........+.. ..-..++.. ++.||+....
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~---- 245 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG---- 245 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET----
T ss_pred ceEEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC----
Confidence 223333 23 56766432 2578899875 4444322211111111 111223332 4678877422
Q ss_pred ccCeEEEEECCCCcE-EEeecCCCCCCCcceeEEEEE-CCe-EEEEcCCCCCCCCCCcEEEEecC
Q 006334 254 YYNDIWILNVSTCSW-SQLDTCGQQPQGRFSHAAVVT-GSD-IVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 254 ~~~dv~~yD~~t~~W-~~l~~~~~~p~~R~~hsav~~-~~~-lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
...+++||+++.+. ..+. .+. ..-.++++. ++. |||.... .+.++++++.
T Consensus 246 -~~~i~~~d~~~g~~~~~~~----~~~-~~~~~i~~~~dg~~l~v~~~~------~~~l~~~~~~ 298 (314)
T 1pjx_A 246 -SSHIEVFGPDGGQPKMRIR----CPF-EKPSNLHFKPQTKTIFVTEHE------NNAVWKFEWQ 298 (314)
T ss_dssp -TTEEEEECTTCBSCSEEEE----CSS-SCEEEEEECTTSSEEEEEETT------TTEEEEEECS
T ss_pred -CCEEEEEcCCCCcEeEEEe----CCC-CCceeEEECCCCCEEEEEeCC------CCeEEEEeCC
Confidence 24789999985432 2222 121 222233333 445 7766432 1468888875
No 63
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.52 E-value=1.8 Score=43.44 Aligned_cols=237 Identities=9% Similarity=0.033 Sum_probs=110.5
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCc--
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKE-- 114 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~-- 114 (650)
+..++.|+.+ ..+.+||+.+......... ...-.++.+ .++..++.++.+.......+..||+.+..
T Consensus 86 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~ 155 (369)
T 3zwl_B 86 TKYCVTGSAD-----YSIKLWDVSNGQCVATWKS-----PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSAT 155 (369)
T ss_dssp SSEEEEEETT-----TEEEEEETTTCCEEEEEEC-----SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred CCEEEEEeCC-----CeEEEEECCCCcEEEEeec-----CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccc
Confidence 4455555532 3688899887765444332 111122233 25666666665423333567777765442
Q ss_pred --EEeeecC-----CCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCC-Cceee-ccccCCCCCCCCcce
Q 006334 115 --WMRPECR-----GAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKT-MRWAS-PAVKGDIPVPRDSHS 185 (650)
Q Consensus 115 --W~~l~~~-----~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t-~~Wt~-i~~~~~lP~~R~~hs 185 (650)
+...... ...........+....++.++++|+.+ ..+.+||+.+ ..-.. +. . . ...-.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~---~-~-~~~v~~ 223 (369)
T 3zwl_B 156 HELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-------GKISKYDVSNNYEYVDSID---L-H-EKSISD 223 (369)
T ss_dssp CCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-------SEEEEEETTTTTEEEEEEE---C-C-SSCEEE
T ss_pred eeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-------CEEEEEECCCCcEeEEEEe---c-C-CCceeE
Confidence 2221000 000000122233333456677777653 3588999876 33221 11 1 0 111112
Q ss_pred eeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCC---------ccc
Q 006334 186 SNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDK---------HYY 255 (650)
Q Consensus 186 ~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~---------~~~ 255 (650)
+... ++.+++.|+.+ ..+..||+.+.+....-. .. ......+...+++.+++|+..+. ...
T Consensus 224 ~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~---~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 294 (369)
T 3zwl_B 224 MQFSPDLTYFITSSRD-----TNSFLVDVSTLQVLKKYE---TD-CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGK 294 (369)
T ss_dssp EEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEE---CS-SCEEEEEECSSSSEEEEEECCC-------------
T ss_pred EEECCCCCEEEEecCC-----ceEEEEECCCCceeeeec---CC-CCceeEEecCCCceEEEeecCCCceEEEEecCCCc
Confidence 2222 45666666644 478999998876544331 11 11112222234556666654431 111
Q ss_pred CeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 256 NDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 256 ~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
..+.+||..+.+-...-. ...... .++.+. ++++++.|+.+ ..+.++++.
T Consensus 295 ~~i~~~d~~~~~~~~~~~---~~~~~v-~~~~~s~~~~~l~s~~~d------g~v~iw~~~ 345 (369)
T 3zwl_B 295 FEARFYHKIFEEEIGRVQ---GHFGPL-NTVAISPQGTSYASGGED------GFIRLHHFE 345 (369)
T ss_dssp CEEEEEETTTCCEEEEEE---CCSSCE-EEEEECTTSSEEEEEETT------SEEEEEEEC
T ss_pred ceeEEEecCCCcchhhee---cccCcE-EEEEECCCCCEEEEEcCC------CeEEEEECc
Confidence 268888887765333211 011111 122222 56777777742 245556554
No 64
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.48 E-value=0.42 Score=54.02 Aligned_cols=195 Identities=12% Similarity=0.001 Sum_probs=102.8
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCC-cEEeeecCCCCCCCCc
Q 006334 52 FGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESK-EWMRPECRGAPPSPRE 129 (650)
Q Consensus 52 ~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~-~W~~l~~~~~~P~~R~ 129 (650)
...++++|..+.....+... . .....-..+.. -+++.++++..+.......++.+|+.+. .+..+.........-.
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~-~-~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTG-E-PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp EEEEEEEETTTTEEEECCCC-S-CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred eeEEEEEECCCCceEeeccC-C-CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 35799999998876555322 1 11122222232 3666566666555445568999999988 6665421111000000
Q ss_pred ccEEEEEc--CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcc-eeeee--cC-EEEEEeccCCCC
Q 006334 130 SHTATLVG--DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSH-SSNVI--AN-RLFVYGGDCGDQ 203 (650)
Q Consensus 130 ~hs~~~~~--~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~h-s~v~~--~~-~Iyv~GG~~~~~ 203 (650)
........ ++++++.+..+ . ...+|.+|........+. . ..... ..+.+ ++ .||+.+.. ...
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~-g----~~~l~~~~~~~~~~~~l~---~---~~~~v~~~~~~spdg~~l~~~~~~-~~~ 379 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRD-G----WNHLYLYDTTGRLIRQVT---K---GEWEVTNFAGFDPKGTRLYFESTE-ASP 379 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTT-S----SCEEEEEETTSCEEEECC---C---SSSCEEEEEEECTTSSEEEEEESS-SCT
T ss_pred cCCceeecCCCCEEEEEEccC-C----ccEEEEEECCCCEEEecC---C---CCeEEEeeeEEcCCCCEEEEEecC-CCC
Confidence 12234444 67766665442 1 356888887666666543 1 11111 11222 33 45555443 222
Q ss_pred ccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 204 YHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 204 ~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
....+|.+|+.+.....+.. ... .+.++. -+++.+++...+ .....+++.+|+.+.+
T Consensus 380 ~~~~l~~~d~~~~~~~~l~~-----~~~-~~~~~~spdg~~l~~~~~~-~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 380 LERHFYCIDIKGGKTKDLTP-----ESG-MHRTQLSPDGSAIIDIFQS-PTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TCBEEEEEETTCCCCEESCC-----SSS-EEEEEECTTSSEEEEEEEC-SSCSCEEEEEESSSCE
T ss_pred ceEEEEEEEcCCCCceeccC-----CCc-eEEEEECCCCCEEEEEecC-CCCCcEEEEEECCCCe
Confidence 33589999998877665541 111 222222 345555554332 2334679999998887
No 65
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.47 E-value=2.5 Score=42.75 Aligned_cols=226 Identities=10% Similarity=0.076 Sum_probs=110.6
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeec-CCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLAT-TGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~-~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
+.+++.|+.++ .+.++|..+........ .+. ...-.++.+. ++.+++.|+.++ .+..+|+.+.+-
T Consensus 48 ~~~l~tgs~D~-----~v~vW~~~~~~~~~~~~l~gh---~~~v~~~~~~~~~~~l~s~s~D~-----~i~lWd~~~~~~ 114 (321)
T 3ow8_A 48 SETVVTGSLDD-----LVKVWKWRDERLDLQWSLEGH---QLGVVSVDISHTLPIAASSSLDA-----HIRLWDLENGKQ 114 (321)
T ss_dssp -CEEEEEETTS-----CEEEEEEETTEEEEEEEECCC---SSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEE
T ss_pred CCEEEEEcCCC-----CEEEEECCCCCeeeeeeeccC---CCCEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCE
Confidence 45677777654 35555555544432211 111 1111122222 455667676543 678889887754
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLF 194 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iy 194 (650)
...- . ..+ ....++....++++++.|+.+ ..+.+||..+..-...- . . ....-.+++.. +++++
T Consensus 115 ~~~~-~-~~~--~~~~~~~~spdg~~l~~g~~d-------g~v~i~~~~~~~~~~~~-~-~--~~~~v~~~~~spdg~~l 179 (321)
T 3ow8_A 115 IKSI-D-AGP--VDAWTLAFSPDSQYLATGTHV-------GKVNIFGVESGKKEYSL-D-T--RGKFILSIAYSPDGKYL 179 (321)
T ss_dssp EEEE-E-CCT--TCCCCEEECTTSSEEEEECTT-------SEEEEEETTTCSEEEEE-E-C--SSSCEEEEEECTTSSEE
T ss_pred EEEE-e-CCC--ccEEEEEECCCCCEEEEEcCC-------CcEEEEEcCCCceeEEe-c-C--CCceEEEEEECCCCCEE
Confidence 3321 1 111 112234444567777877763 35778888765432211 0 0 01111122222 46677
Q ss_pred EEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCcccCeEEEEECCCCcEEEeec
Q 006334 195 VYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDT 273 (650)
Q Consensus 195 v~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~ 273 (650)
+.|+.+ ..+..||+.+.+-...- . .. ... -.+++. .++++++.|+.+ ..+.+||+.+......-.
T Consensus 180 asg~~d-----g~i~iwd~~~~~~~~~~-~-~h-~~~-v~~l~~spd~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~ 245 (321)
T 3ow8_A 180 ASGAID-----GIINIFDIATGKLLHTL-E-GH-AMP-IRSLTFSPDSQLLVTASDD-----GYIKIYDVQHANLAGTLS 245 (321)
T ss_dssp EEEETT-----SCEEEEETTTTEEEEEE-C-CC-SSC-CCEEEECTTSCEEEEECTT-----SCEEEEETTTCCEEEEEC
T ss_pred EEEcCC-----CeEEEEECCCCcEEEEE-c-cc-CCc-eeEEEEcCCCCEEEEEcCC-----CeEEEEECCCcceeEEEc
Confidence 777765 46889999877543221 0 10 111 112222 346777777654 358899998776543211
Q ss_pred CCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 274 CGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 274 ~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
.....-.++++. ++.+++.|+.+ ..+.++++.
T Consensus 246 ----~h~~~v~~~~~sp~~~~l~s~s~D------~~v~iwd~~ 278 (321)
T 3ow8_A 246 ----GHASWVLNVAFCPDDTHFVSSSSD------KSVKVWDVG 278 (321)
T ss_dssp ----CCSSCEEEEEECTTSSEEEEEETT------SCEEEEETT
T ss_pred ----CCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCC
Confidence 011111122232 56677777743 246666665
No 66
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.47 E-value=0.89 Score=45.78 Aligned_cols=249 Identities=9% Similarity=0.050 Sum_probs=121.6
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.||+.+... ..+++||+.++.+..+... + ...-++++.. ++++|+....+ ......+++||+.+...
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~---~-~~~~~~i~~~~dg~l~v~~~~~-~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVS---H-KANPAAIKIHKDGRLFVCYLGD-FKSTGGIFAATENGDNL 124 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEEC---S-SSSEEEEEECTTSCEEEEECTT-SSSCCEEEEECTTSCSC
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeC---C-CCCcceEEECCCCcEEEEeCCC-CCCCceEEEEeCCCCEE
Confidence 46788766532 4799999998888765422 1 1222344443 67888765332 11235799999988876
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cC-EE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-AN-RL 193 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~-~I 193 (650)
..+-.. ......-..++...++.+|+...... .......+++||+++.+...+.. ... ....++.. ++ .|
T Consensus 125 ~~~~~~--~~~~~~~~~i~~d~~g~l~v~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~--~~~---~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 125 QDIIED--LSTAYCIDDMVFDSKGGFYFTDFRGY-STNPLGGVYYVSPDFRTVTPIIQ--NIS---VANGIALSTDEKVL 196 (333)
T ss_dssp EEEECS--SSSCCCEEEEEECTTSCEEEEECCCB-TTBCCEEEEEECTTSCCEEEEEE--EES---SEEEEEECTTSSEE
T ss_pred EEEEcc--CccCCcccceEECCCCCEEEEecccc-ccCCCceEEEEeCCCCEEEEeec--CCC---cccceEECCCCCEE
Confidence 533111 11122233444445678887543211 11223578999987766654321 110 11222222 33 57
Q ss_pred EEEeccCCCCccCeEEEEECCC--CcEEEeee--cCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 194 FVYGGDCGDQYHGDIDMLDMNS--LTWSRLAI--IGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~t--~~W~~i~~--~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
|+.... .+.+++||+.+ .....+.. ....+....-..++.. +++||+.... ...+++||++...-
T Consensus 197 ~v~~~~-----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~-----~~~v~~~d~~g~~~ 266 (333)
T 2dg1_A 197 WVTETT-----ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG-----QGRVLVFNKRGYPI 266 (333)
T ss_dssp EEEEGG-----GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-----TTEEEEECTTSCEE
T ss_pred EEEeCC-----CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-----CCEEEEECCCCCEE
Confidence 776432 25789999853 23332210 0001111111223332 4577776422 24689999865544
Q ss_pred EEeecCCCCCCCc--ceeEEEEE-C-CeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 269 SQLDTCGQQPQGR--FSHAAVVT-G-SDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 269 ~~l~~~~~~p~~R--~~hsav~~-~-~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
..+.... ...+. .-.++++. + +.||+..... .......++++++.
T Consensus 267 ~~~~~~~-~~~g~~~~~~~~~~~~dg~~L~v~~~~g-~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 267 GQILIPG-RDEGHMLRSTHPQFIPGTNQLIICSNDI-EMGGGSMLYTVNGF 315 (333)
T ss_dssp EEEECTT-GGGTCSCBCCEEEECTTSCEEEEEEECG-GGTCCEEEEEEECS
T ss_pred EEEEcCC-CccccccCcceEEECCCCCEEEEEeCcc-CCCCCceEEEEecc
Confidence 4443210 00000 12233333 3 3566654321 11123467777765
No 67
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.46 E-value=0.61 Score=54.03 Aligned_cols=212 Identities=9% Similarity=0.059 Sum_probs=108.1
Q ss_pred eEEEEECCCCcEEEeecCCCCCC----CCcceEEEEE-CCE-EEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCC
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPG----PRDSHSAILW-GHK-MIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSP 127 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~----pR~~hsa~~~-~~~-lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~ 127 (650)
-+.+||+.++.+.........+. ...-.+++.. ++. ||| |.. ...+++||+.+++++.+.........
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~-----~~Gl~~~d~~~~~~~~~~~~~~~l~~ 451 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTH-----AGGLSILHRNSGQVENFNQRNSQLVN 451 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EET-----TTEEEEEETTTCCEEEECTTTSCCSC
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeC-----cCceeEEeCCCCcEEEeecCCCCcCC
Confidence 36777777777766543210000 1112233333 566 776 322 14589999999988876321111111
Q ss_pred CcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccC---CCCCCCCcceeee-ecCEEEEEeccCCCC
Q 006334 128 RESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKG---DIPVPRDSHSSNV-IANRLFVYGGDCGDQ 203 (650)
Q Consensus 128 R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~---~lP~~R~~hs~v~-~~~~Iyv~GG~~~~~ 203 (650)
..-.++....++.|++-. . +-+++||+.+++|+...... .++.. .-.++.. -++.|++...
T Consensus 452 ~~v~~i~~d~~g~lwigt-~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~i~~d~~g~lWigt~----- 516 (795)
T 4a2l_A 452 ENVYAILPDGEGNLWLGT-L--------SALVRFNPEQRSFTTIEKEKDGTPVVSK-QITTLFRDSHKRLWIGGE----- 516 (795)
T ss_dssp SCEEEEEECSSSCEEEEE-S--------SCEEEEETTTTEEEECCBCTTCCBCCCC-CEEEEEECTTCCEEEEES-----
T ss_pred CeeEEEEECCCCCEEEEe-c--------CceeEEeCCCCeEEEccccccccccCCc-eEEEEEECCCCCEEEEeC-----
Confidence 122233333356777632 2 23889999999998764221 11111 1111211 1466777532
Q ss_pred ccCeEEEEECCCCcEEEeeecCCCC-CcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCC
Q 006334 204 YHGDIDMLDMNSLTWSRLAIIGSSP-GVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQG 280 (650)
Q Consensus 204 ~~n~v~~yd~~t~~W~~i~~~g~~P-~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~ 280 (650)
+.+++||+.+.++ .+....... .+-....++.. ++.|+|... ..+++||+.+++++.+.....++..
T Consensus 517 --~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~ 586 (795)
T 4a2l_A 517 --EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNN 586 (795)
T ss_dssp --SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------SCEEEEETTTTEEEEECGGGTCSCS
T ss_pred --CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------CCceeECCCCCcEEEeCCCCCCchh
Confidence 3689999988888 443110001 11111222222 357777531 2589999999999887643224433
Q ss_pred cceeEEEEE-CCeEEEEc
Q 006334 281 RFSHAAVVT-GSDIVIYG 297 (650)
Q Consensus 281 R~~hsav~~-~~~lyV~G 297 (650)
.. .+++.. ++.|++.+
T Consensus 587 ~i-~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 587 VV-YGILEDSFGRLWLST 603 (795)
T ss_dssp CE-EEEEECTTSCEEEEE
T ss_pred he-EEEEECCCCCEEEEc
Confidence 32 233332 46677765
No 68
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.39 E-value=2.4 Score=41.95 Aligned_cols=239 Identities=11% Similarity=0.058 Sum_probs=121.8
Q ss_pred ceeEEEEEC--CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeE
Q 006334 29 WGHSACYSH--GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDL 105 (650)
Q Consensus 29 ~ghs~v~~~--~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv 105 (650)
...+.+... +.||+.+.. ...+++||+.+. ...+... . ..-.++++. ++++|+.... ...+
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~-----~~~i~~~~~~~~-~~~~~~~----~-~~~~~l~~~~dg~l~v~~~~-----~~~i 92 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVR-----QNRTWAWSDDGQ-LSPEMHP----S-HHQNGHCLNKQGHLIACSHG-----LRRL 92 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGG-----GTEEEEEETTSC-EEEEESS----C-SSEEEEEECTTCCEEEEETT-----TTEE
T ss_pred cccCCeEeCCCCEEEEEeCC-----CCEEEEEECCCC-eEEEECC----C-CCcceeeECCCCcEEEEecC-----CCeE
Confidence 344555542 457877753 247999999988 6655432 1 122344443 6778775421 2569
Q ss_pred EEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEE----ccccC------CCCcccceEEEEecCCCceeeccccC
Q 006334 106 HILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIF----GGSGE------GEANYLNDLHVLDLKTMRWASPAVKG 175 (650)
Q Consensus 106 ~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~----GG~~~------~~~~~~~dv~~yd~~t~~Wt~i~~~~ 175 (650)
++||+.+.+.+.+...........-..+++..++.||+. |.... ........+|+||.. .+...+. .
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~--~ 169 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPI--R 169 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEE--C
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEee--c
Confidence 999998888766521101111111223445557888886 43210 001112478999887 5554432 1
Q ss_pred CCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECC-CCcE-EEeeecCCCCCcccceEEEEECCEEEEEeccCCC
Q 006334 176 DIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMN-SLTW-SRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDK 252 (650)
Q Consensus 176 ~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~-t~~W-~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~ 252 (650)
.+..+ ..++.. ++++++.... .+.+++||+. +.+. ...... ..........+.--+++||+..
T Consensus 170 ~~~~~---~gi~~s~dg~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~----- 235 (296)
T 3e5z_A 170 DRVKP---NGLAFLPSGNLLVSDTG-----DNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA----- 235 (296)
T ss_dssp CCSSE---EEEEECTTSCEEEEETT-----TTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-----
T ss_pred CCCCC---ccEEECCCCCEEEEeCC-----CCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-----
Confidence 11111 222222 4555544332 2578999986 5555 222211 1111111122222356888875
Q ss_pred cccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE--C-CeEEEEcCCCCCCCCCCcEEEEecCC
Q 006334 253 HYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT--G-SDIVIYGGCGEDERPLNELLVLQLGA 316 (650)
Q Consensus 253 ~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~--~-~~lyV~GG~~~~~~~~~d~~~l~l~~ 316 (650)
...+++||+.......+.. +.. -.++++. + +.|||... +.++++++..
T Consensus 236 --~~~v~~~~~~g~~~~~~~~----~~~--~~~~~f~~~d~~~L~v~t~--------~~l~~~~~~~ 286 (296)
T 3e5z_A 236 --GDGVHVLTPDGDELGRVLT----PQT--TSNLCFGGPEGRTLYMTVS--------TEFWSIETNV 286 (296)
T ss_dssp --TTEEEEECTTSCEEEEEEC----SSC--CCEEEEESTTSCEEEEEET--------TEEEEEECSC
T ss_pred --CCeEEEECCCCCEEEEEEC----CCC--ceeEEEECCCCCEEEEEcC--------CeEEEEEccc
Confidence 2479999998665555543 222 1233332 2 24666532 3678887753
No 69
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.29 E-value=1.5 Score=44.25 Aligned_cols=196 Identities=11% Similarity=0.107 Sum_probs=92.2
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEE
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTA 133 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~ 133 (650)
.+|.+|..++++..+...... ......+..-+++||+.+... ....++.||+.+.+++.+.... .....-..+
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~--~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~--~~~~~p~~~ 91 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAAT--QNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVV--APGTPPAYV 91 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEEC--SCCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEE--EESCCCSEE
T ss_pred EEEEEcCCCCeEEEeeeeecc--CCcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeee--cCCCCCEEE
Confidence 467778888888765432111 111122223367877765321 1357899999888776653210 011112334
Q ss_pred EEEcCCEEEEEccccCCCCcccceEEEEecC-CCceeecc---ccCCCCCCCC----cceeeee-cCEEEEEeccCCCCc
Q 006334 134 TLVGDDKMVIFGGSGEGEANYLNDLHVLDLK-TMRWASPA---VKGDIPVPRD----SHSSNVI-ANRLFVYGGDCGDQY 204 (650)
Q Consensus 134 ~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~-t~~Wt~i~---~~~~lP~~R~----~hs~v~~-~~~Iyv~GG~~~~~~ 204 (650)
++..+++.+++.+..+ +.+.+||+. +.....+. ..+.-|.+|. -+.++.. ++++|+.+...
T Consensus 92 a~spdg~~l~~~~~~~------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~---- 161 (347)
T 3hfq_A 92 AVDEARQLVYSANYHK------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS---- 161 (347)
T ss_dssp EEETTTTEEEEEETTT------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT----
T ss_pred EECCCCCEEEEEeCCC------CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC----
Confidence 4455555444433311 357777774 33333222 1111221111 1222222 45677664432
Q ss_pred cCeEEEEECC-CCcEEEeeecCCCCCcccceEEEEECC-EEEEEeccCCCcccCeEEEEECC--CCcEEEee
Q 006334 205 HGDIDMLDMN-SLTWSRLAIIGSSPGVRAGHAAINIGT-KVYIIGGVGDKHYYNDIWILNVS--TCSWSQLD 272 (650)
Q Consensus 205 ~n~v~~yd~~-t~~W~~i~~~g~~P~~R~~~s~v~~~~-~IyI~GG~~~~~~~~dv~~yD~~--t~~W~~l~ 272 (650)
+.+++||+. +.+...+......+.....+.+..-++ .+|+.+... +.+.+|++. +.++..+.
T Consensus 162 -~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 162 -DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp -TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETTTTEEEEEE
T ss_pred -CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCCCCceEEee
Confidence 478889987 566655432111111111122222344 477764322 345555544 57766554
No 70
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.27 E-value=1.8 Score=43.27 Aligned_cols=232 Identities=9% Similarity=-0.033 Sum_probs=114.3
Q ss_pred cceeEEEEE--CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCe
Q 006334 28 RWGHSACYS--HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVND 104 (650)
Q Consensus 28 R~ghs~v~~--~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~nd 104 (650)
..+-..+.. ++.||+..-. .+.+++||+.++........ .+. .+++. .++++|+.. .+.
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~-----~~~-~~i~~~~dG~l~v~~-------~~~ 74 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIP-----AKKVCRWDSFTKQVQRVTMD-----APV-SSVALRQSGGYVATI-------GTK 74 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETT-----TTEEEEEETTTCCEEEEECS-----SCE-EEEEEBTTSSEEEEE-------TTE
T ss_pred ccccCCeEECCCCEEEEEECC-----CCEEEEEECCCCcEEEEeCC-----Cce-EEEEECCCCCEEEEE-------CCe
Confidence 344455554 3688887653 34799999998876544322 111 23333 356766643 257
Q ss_pred EEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCC-----CcccceEEEEecCCCceeeccccCCCCC
Q 006334 105 LHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGE-----ANYLNDLHVLDLKTMRWASPAVKGDIPV 179 (650)
Q Consensus 105 v~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~-----~~~~~dv~~yd~~t~~Wt~i~~~~~lP~ 179 (650)
+++||+.+.+++.+..............+++..+++||+- ...... ......+|++|... +...+.. .+.
T Consensus 75 l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~-~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~--~~~- 149 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAG-TMAEETAPAVLERHQGALYSLFPDH-HVKKYFD--QVD- 149 (297)
T ss_dssp EEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEE-EEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE--EES-
T ss_pred EEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEe-cCCcccccccccCCCcEEEEEECCC-CEEEEee--ccc-
Confidence 9999999998876632211111111223444446787763 221110 01234688888753 3332211 111
Q ss_pred CCCcceeeee--cCEEEEEeccCCCCccCeEEEEEC--CCCcEEEeeecCCCCC-cccceEEEE-ECCEEEEEeccCCCc
Q 006334 180 PRDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDM--NSLTWSRLAIIGSSPG-VRAGHAAIN-IGTKVYIIGGVGDKH 253 (650)
Q Consensus 180 ~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~--~t~~W~~i~~~g~~P~-~R~~~s~v~-~~~~IyI~GG~~~~~ 253 (650)
.-..++.. ++.+|+.... .+.+++||. .+............+. ...-..++. .++.||+..-.
T Consensus 150 --~pngi~~spdg~~lyv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~---- 218 (297)
T 3g4e_A 150 --ISNGLDWSLDHKIFYYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN---- 218 (297)
T ss_dssp --BEEEEEECTTSCEEEEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET----
T ss_pred --cccceEEcCCCCEEEEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC----
Confidence 11222322 3467777542 257888875 4555432111101111 111123333 34688887421
Q ss_pred ccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEEC---CeEEEEcC
Q 006334 254 YYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTG---SDIVIYGG 298 (650)
Q Consensus 254 ~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~---~~lyV~GG 298 (650)
-..|++||+++.+....-. .|..+. .++++.+ +.|||...
T Consensus 219 -~~~v~~~d~~tG~~~~~i~---~p~~~~-t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 219 -GGRVIRLDPVTGKRLQTVK---LPVDKT-TSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp -TTEEEEECTTTCCEEEEEE---CSSSBE-EEEEEESGGGCEEEEEEB
T ss_pred -CCEEEEEcCCCceEEEEEE---CCCCCc-eEEEEeCCCCCEEEEEcC
Confidence 1359999999766543221 232222 2333332 46888754
No 71
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.25 E-value=1.7 Score=49.55 Aligned_cols=124 Identities=18% Similarity=0.242 Sum_probs=69.6
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEECCCCc--EEEeecCCCC--C---CCCcceEEEEECCEEEEEcccCCCcCcCe
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMV--WSTLATTGQG--P---GPRDSHSAILWGHKMIVFGGTNGYKKVND 104 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~s--W~~l~~~g~~--P---~pR~~hsa~~~~~~lyVfGG~~~~~~~nd 104 (650)
+.++.++.||+... .+.++.+|..+++ |+.-...... + ......+.++.+++||+... ...
T Consensus 72 ~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~ 139 (677)
T 1kb0_A 72 TPVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGR 139 (677)
T ss_dssp CCEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSE
T ss_pred CCEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCE
Confidence 44667999999765 2569999988764 8764322100 0 00122345667889888532 256
Q ss_pred EEEEECCCCc--EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC--ceee
Q 006334 105 LHILDLESKE--WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM--RWAS 170 (650)
Q Consensus 105 v~~yD~~t~~--W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~--~Wt~ 170 (650)
++.+|..+.+ |+.-.............+.++. ++.+|+..+..+ ......++.||..+. .|+.
T Consensus 140 l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~--~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAE--YGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTT--TCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccc--cCCCCEEEEEECCCCcEEEEe
Confidence 9999998874 8763110000001111222333 677776433211 123467999999876 4775
No 72
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.21 E-value=3.7 Score=43.18 Aligned_cols=231 Identities=12% Similarity=0.032 Sum_probs=113.6
Q ss_pred EECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 35 YSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 35 ~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
..++.+++.|+.+ ..+.+||..+..-...-. +. ...-.++....+.+++.|+.++ .+..+|+.+.+
T Consensus 129 ~~~~~~l~sgs~d-----g~i~vwd~~~~~~~~~~~-~h---~~~V~~l~~~~~~~l~s~s~dg-----~i~vwd~~~~~ 194 (464)
T 3v7d_B 129 QFEDNYVITGADD-----KMIRVYDSINKKFLLQLS-GH---DGGVWALKYAHGGILVSGSTDR-----TVRVWDIKKGC 194 (464)
T ss_dssp EEETTEEEEEETT-----SCEEEEETTTTEEEEEEC-CC---SSCEEEEEECSTTEEEEEETTS-----CEEEEETTTTE
T ss_pred EECCCEEEEEcCC-----CcEEEEECCCCcEEEEEe-CC---CcCEEEEEEcCCCEEEEEeCCC-----CEEEEECCCCc
Confidence 3445566666643 368899988775333211 11 1112233333333677776643 57888988876
Q ss_pred EEeeecCCCCCCCCcccEEEEE--cCCEEEEEccccCCCCcccceEEEEecCCCceeeccccC-----------------
Q 006334 115 WMRPECRGAPPSPRESHTATLV--GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKG----------------- 175 (650)
Q Consensus 115 W~~l~~~~~~P~~R~~hs~~~~--~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~----------------- 175 (650)
-...- ..... .-.++... .++.+++.|+.+ ..+.+||+.+..-.......
T Consensus 195 ~~~~~--~~h~~--~v~~l~~~~~~~~~~l~s~s~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (464)
T 3v7d_B 195 CTHVF--EGHNS--TVRCLDIVEYKNIKYIVTGSRD-------NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV 263 (464)
T ss_dssp EEEEE--CCCSS--CEEEEEEEESSSCEEEEEEETT-------SCEEEEECCCCCCC------CCSSEEESCGGGCTTEE
T ss_pred EEEEE--CCCCC--ccEEEEEecCCCCCEEEEEcCC-------CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEE
Confidence 43321 11111 11222222 356778888763 24777887654322100000
Q ss_pred -CCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCc
Q 006334 176 -DIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKH 253 (650)
Q Consensus 176 -~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~ 253 (650)
.+.........+..++.+++.|+.+ ..+..||+.+.+-...- ...... -.+++. .++..++.|+.+
T Consensus 264 ~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~---~~~~~~-v~~~~~~~~~~~l~sg~~d--- 331 (464)
T 3v7d_B 264 GVLRGHMASVRTVSGHGNIVVSGSYD-----NTLIVWDVAQMKCLYIL---SGHTDR-IYSTIYDHERKRCISASMD--- 331 (464)
T ss_dssp EEECCCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTTEEEEEE---CCCSSC-EEEEEEETTTTEEEEEETT---
T ss_pred EEccCccceEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEEEe---cCCCCC-EEEEEEcCCCCEEEEEeCC---
Confidence 0000011111223345666777655 46899998876543322 111111 122222 345666776654
Q ss_pred ccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 254 YYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 254 ~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
..+.+||+.+.+-...-. .....-.++..++..++.|+.+ ..+.++++.
T Consensus 332 --g~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~l~s~s~d------g~v~vwd~~ 380 (464)
T 3v7d_B 332 --TTIRIWDLENGELMYTLQ-----GHTALVGLLRLSDKFLVSAAAD------GSIRGWDAN 380 (464)
T ss_dssp --SCEEEEETTTTEEEEEEC-----CCSSCEEEEEECSSEEEEEETT------SEEEEEETT
T ss_pred --CcEEEEECCCCcEEEEEe-----CCCCcEEEEEEcCCEEEEEeCC------CcEEEEECC
Confidence 358999998775333211 1112224444567777777743 246666665
No 73
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.19 E-value=2.9 Score=41.75 Aligned_cols=215 Identities=11% Similarity=0.049 Sum_probs=108.7
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCc--EEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCC-
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMV--WSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESK- 113 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~s--W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~- 113 (650)
.+.+++.|..+ +.++++|..+++ |+.-... .....+..+..++++|+.+ .+.++.||+..+
T Consensus 4 ~~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~~~----~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~~G~~ 67 (276)
T 3no2_A 4 PQHLLVGGSGW-----NKIAIINKDTKEIVWEYPLEK----GWECNSVAATKAGEILFSY-------SKGAKMITRDGRE 67 (276)
T ss_dssp CCEEEEECTTC-----SEEEEEETTTTEEEEEEECCT----TCCCCEEEECTTSCEEEEC-------BSEEEEECTTSCE
T ss_pred CCcEEEeeCCC-----CEEEEEECCCCeEEEEeCCCc----cCCCcCeEECCCCCEEEeC-------CCCEEEECCCCCE
Confidence 35677766533 568899987665 6543211 0122333344478888832 256999999332
Q ss_pred cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC-ceeeccccCCCCC--CCCcceeeeec
Q 006334 114 EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM-RWASPAVKGDIPV--PRDSHSSNVIA 190 (650)
Q Consensus 114 ~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~-~Wt~i~~~~~lP~--~R~~hs~v~~~ 190 (650)
.|+.- . +.....++.....++.+++..... ...++.+|++.. .|+. ........ ..........+
T Consensus 68 ~W~~~---~--~~~~~~~~~~~~~dG~~lv~~~~~------~~~v~~vd~~Gk~l~~~-~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 68 LWNIA---A--PAGCEMQTARILPDGNALVAWCGH------PSTILEVNMKGEVLSKT-EFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp EEEEE---C--CTTCEEEEEEECTTSCEEEEEEST------TEEEEEECTTSCEEEEE-EECCSCSSGGGSCSCCEECTT
T ss_pred EEEEc---C--CCCccccccEECCCCCEEEEecCC------CCEEEEEeCCCCEEEEE-eccCCCCcccccccCceECCC
Confidence 37542 1 111233455555677777654321 135777887433 2442 11111111 11112223335
Q ss_pred CEEEEEeccCCCCccCeEEEEECCCC-cEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCc--
Q 006334 191 NRLFVYGGDCGDQYHGDIDMLDMNSL-TWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCS-- 267 (650)
Q Consensus 191 ~~Iyv~GG~~~~~~~n~v~~yd~~t~-~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~-- 267 (650)
+.+++.... ...+.+||++.. .|+.-. +. ....+....++.++|.+..+ ..++.||+.+.+
T Consensus 136 G~~lv~~~~-----~~~v~~~d~~G~~~w~~~~--~~----~~~~~~~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 136 GNYLVPLFA-----TSEVREIAPNGQLLNSVKL--SG----TPFSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIV 199 (276)
T ss_dssp SCEEEEETT-----TTEEEEECTTSCEEEEEEC--SS----CCCEEEECTTSCEEEECBTT-----SEEEEECTTTCCEE
T ss_pred CCEEEEecC-----CCEEEEECCCCCEEEEEEC--CC----CccceeEcCCCCEEEEeCCC-----CeEEEEeCcCCcEE
Confidence 555554432 257899998732 365432 11 11123333456788776432 369999999654
Q ss_pred EEEeecCCCCCCCcc--eeEEEEE-CCeEEEEc
Q 006334 268 WSQLDTCGQQPQGRF--SHAAVVT-GSDIVIYG 297 (650)
Q Consensus 268 W~~l~~~~~~p~~R~--~hsav~~-~~~lyV~G 297 (650)
|+.-.. ..+..+. -.++... ++.+||..
T Consensus 200 w~~~~~--~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 200 RRVNAN--DIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEEGG--GSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEecCC--CCCCccccccccceEcCCCCEEEEe
Confidence 665422 1121222 2233333 77888886
No 74
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.16 E-value=2 Score=43.28 Aligned_cols=203 Identities=9% Similarity=0.036 Sum_probs=96.7
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCc-
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKE- 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~- 114 (650)
++.+++.|+.+ ..+.+||..+..+........ ....-.++.+. ++++++.|+.++ .+..||..+..
T Consensus 63 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~~ 130 (372)
T 1k8k_C 63 DSNRIVTCGTD-----RNAYVWTLKGRTWKPTLVILR--INRAARCVRWAPNEKKFAVGSGSR-----VISICYFEQEND 130 (372)
T ss_dssp TTTEEEEEETT-----SCEEEEEEETTEEEEEEECCC--CSSCEEEEEECTTSSEEEEEETTS-----SEEEEEEETTTT
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCeeeeeEEeec--CCCceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCCc
Confidence 45566666643 358888888887765533211 11122233332 566777776543 35566655543
Q ss_pred EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc---------eeeccccC----CCCCCC
Q 006334 115 WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR---------WASPAVKG----DIPVPR 181 (650)
Q Consensus 115 W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~---------Wt~i~~~~----~lP~~R 181 (650)
|...... ..+....-.++....++.+++.|+.+ ..+.+||+.... |..-...+ .+....
T Consensus 131 ~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (372)
T 1k8k_C 131 WWVCKHI-KKPIRSTVLSLDWHPNSVLLAAGSCD-------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC 202 (372)
T ss_dssp EEEEEEE-CTTCCSCEEEEEECTTSSEEEEEETT-------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS
T ss_pred ceeeeee-ecccCCCeeEEEEcCCCCEEEEEcCC-------CCEEEEEcccccccccccccccccccchhhheEecCCCC
Confidence 3322111 11112223344444466777777763 247788854211 11100000 111111
Q ss_pred Ccceeeee--cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEE
Q 006334 182 DSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIW 259 (650)
Q Consensus 182 ~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~ 259 (650)
..-..+.+ ++.+++.|+.+ +.+..||+.+.+-...-. . ........+...++++++.| .+ ..+.
T Consensus 203 ~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~l~~~-~d-----~~i~ 268 (372)
T 1k8k_C 203 GWVHGVCFSANGSRVAWVSHD-----STVCLADADKKMAVATLA--S-ETLPLLAVTFITESSLVAAG-HD-----CFPV 268 (372)
T ss_dssp SCEEEEEECSSSSEEEEEETT-----TEEEEEEGGGTTEEEEEE--C-SSCCEEEEEEEETTEEEEEE-TT-----SSCE
T ss_pred CeEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCceeEEEc--c-CCCCeEEEEEecCCCEEEEE-eC-----CeEE
Confidence 11112222 45566666654 478899987765332221 1 11111122223456766655 32 2466
Q ss_pred EEECCC--CcEEEeec
Q 006334 260 ILNVST--CSWSQLDT 273 (650)
Q Consensus 260 ~yD~~t--~~W~~l~~ 273 (650)
+||+.+ +.|..+..
T Consensus 269 i~~~~~~~~~~~~~~~ 284 (372)
T 1k8k_C 269 LFTYDSAAGKLSFGGR 284 (372)
T ss_dssp EEEEETTTTEEEECCC
T ss_pred EEEccCcCceEEEeec
Confidence 777777 88887643
No 75
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.15 E-value=3.3 Score=43.78 Aligned_cols=154 Identities=10% Similarity=0.031 Sum_probs=77.8
Q ss_pred CEEEEEccCCCCcccceEEEEECC--CCcEEEe-ecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLD--TMVWSTL-ATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~--t~sW~~l-~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
..|++.|+.+ ..+.+||.. +...... .... .+..-.++++. +++.+++|+.+ ..++.+|+.+.
T Consensus 115 ~~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~~-----g~v~~~~~~~~ 181 (450)
T 2vdu_B 115 SRLIACADSD-----KSLLVFDVDKTSKNVLKLRKRFC---FSKRPNAISIAEDDTTVIIADKF-----GDVYSIDINSI 181 (450)
T ss_dssp SEEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEEE---CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSC
T ss_pred CEEEEEECCC-----CeEEEEECcCCCCceeeeeeccc---CCCCceEEEEcCCCCEEEEEeCC-----CcEEEEecCCc
Confidence 3556777753 357788877 5443332 2110 01111233332 56677777542 35788888765
Q ss_pred cEEeeecCCCCC-CCCcccEEEEEcC---CEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee
Q 006334 114 EWMRPECRGAPP-SPRESHTATLVGD---DKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI 189 (650)
Q Consensus 114 ~W~~l~~~~~~P-~~R~~hs~~~~~~---~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~ 189 (650)
..... ...... ....-.++....+ +.+++.|+.+ ..+.+||+.+.........+ ... .-.+++..
T Consensus 182 ~~~~~-~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-------~~i~vwd~~~~~~~~~~~~~--h~~-~v~~~~~s 250 (450)
T 2vdu_B 182 PEEKF-TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-------EHIKISHYPQCFIVDKWLFG--HKH-FVSSICCG 250 (450)
T ss_dssp CCSSC-CCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-------SCEEEEEESCTTCEEEECCC--CSS-CEEEEEEC
T ss_pred ccccc-cceeeecccCceEEEEEcCCCCCCcEEEEEcCC-------CcEEEEECCCCceeeeeecC--CCC-ceEEEEEC
Confidence 43210 000010 1112233444456 7788888763 35888898766543211001 111 11122222
Q ss_pred cCEEEEEeccCCCCccCeEEEEECCCCcEEE
Q 006334 190 ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR 220 (650)
Q Consensus 190 ~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~ 220 (650)
++.+++.|+.+ ..+.+||+.+.+...
T Consensus 251 d~~~l~s~~~d-----~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 251 KDYLLLSAGGD-----DKIFAWDWKTGKNLS 276 (450)
T ss_dssp STTEEEEEESS-----SEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEee
Confidence 66777777754 478999998876443
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.11 E-value=2.3 Score=43.55 Aligned_cols=146 Identities=9% Similarity=0.064 Sum_probs=74.3
Q ss_pred CEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc
Q 006334 88 HKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR 167 (650)
Q Consensus 88 ~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~ 167 (650)
+..++.|+.+ ..++.||+.+.+-...- . .....-..+....++.+++.|+.+ ..+.+||+.+..
T Consensus 217 ~~~~~~~~~~-----g~i~~~d~~~~~~~~~~-~---~~~~~i~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~ 280 (425)
T 1r5m_A 217 DDKFVIPGPK-----GAIFVYQITEKTPTGKL-I---GHHGPISVLEFNDTNKLLLSASDD-------GTLRIWHGGNGN 280 (425)
T ss_dssp TTEEEEECGG-----GCEEEEETTCSSCSEEE-C---CCSSCEEEEEEETTTTEEEEEETT-------SCEEEECSSSBS
T ss_pred CCEEEEEcCC-----CeEEEEEcCCCceeeee-c---cCCCceEEEEECCCCCEEEEEcCC-------CEEEEEECCCCc
Confidence 3345566543 46889998876432210 0 111223344445566677777753 248888887654
Q ss_pred eeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEE
Q 006334 168 WASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYII 246 (650)
Q Consensus 168 Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~ 246 (650)
....- .. ....-.++....+.+++.|+.+ ..+.+||+.+.+-...-. ... ..-.+++. .++.+++.
T Consensus 281 ~~~~~--~~--~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~---~~~-~~i~~~~~s~~~~~l~~ 347 (425)
T 1r5m_A 281 SQNCF--YG--HSQSIVSASWVGDDKVISCSMD-----GSVRLWSLKQNTLLALSI---VDG-VPIFAGRISQDGQKYAV 347 (425)
T ss_dssp CSEEE--CC--CSSCEEEEEEETTTEEEEEETT-----SEEEEEETTTTEEEEEEE---CTT-CCEEEEEECTTSSEEEE
T ss_pred cceEe--cC--CCccEEEEEECCCCEEEEEeCC-----CcEEEEECCCCcEeEecc---cCC-ccEEEEEEcCCCCEEEE
Confidence 32211 01 1111223333333266666654 478999988776433321 111 11122222 24567777
Q ss_pred eccCCCcccCeEEEEECCCCc
Q 006334 247 GGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 247 GG~~~~~~~~dv~~yD~~t~~ 267 (650)
|+.+ ..+.+||+.+..
T Consensus 348 ~~~d-----g~i~i~~~~~~~ 363 (425)
T 1r5m_A 348 AFMD-----GQVNVYDLKKLN 363 (425)
T ss_dssp EETT-----SCEEEEECHHHH
T ss_pred EECC-----CeEEEEECCCCc
Confidence 6643 358888887654
No 77
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.00 E-value=3.7 Score=41.98 Aligned_cols=240 Identities=13% Similarity=0.123 Sum_probs=120.6
Q ss_pred CeEEeeecCCCCCCCcceeEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEE-EECCEEE
Q 006334 13 AMWLYPKVLGFNPPERWGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAI-LWGHKMI 91 (650)
Q Consensus 13 ~~W~~~~~~g~~P~~R~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~-~~~~~ly 91 (650)
..|.........+ ...-.++.+..+.+|+.|-. ..+++-+-.-.+|+.+......|. ....++ .-++.+|
T Consensus 66 ~tW~~~~~~~~~~-~~~~~~i~~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~--~~~~i~~~~~~~~~ 136 (327)
T 2xbg_A 66 QTWEPRTLVLDHS-DYRFNSVSFQGNEGWIVGEP------PIMLHTTDGGQSWSQIPLDPKLPG--SPRLIKALGNGSAE 136 (327)
T ss_dssp SSCEECCCCCSCC-CCEEEEEEEETTEEEEEEET------TEEEEESSTTSSCEECCCCTTCSS--CEEEEEEEETTEEE
T ss_pred CCCeECCCCCCCC-CccEEEEEecCCeEEEEECC------CeEEEECCCCCCceECccccCCCC--CeEEEEEECCCCEE
Confidence 4687654322111 12233445566888887532 246665445678999864321121 123333 3468888
Q ss_pred EEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecC-CCceee
Q 006334 92 VFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLK-TMRWAS 170 (650)
Q Consensus 92 VfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~-t~~Wt~ 170 (650)
+.|.. ..+++-+=.-.+|+.+.. +.....+.++...++.+|++|-. ..+++-+-. -.+|+.
T Consensus 137 ~~~~~------g~v~~S~DgG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~--------G~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 137 MITNV------GAIYRTKDSGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR--------GSFYSTWEPGQTAWEP 198 (327)
T ss_dssp EEETT------CCEEEESSTTSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT--------SSEEEEECTTCSSCEE
T ss_pred EEeCC------ccEEEEcCCCCCCEEeec----CCCcceEEEEEcCCCcEEEEECC--------CcEEEEeCCCCCceeE
Confidence 87742 135544334568999742 22233445554456677766532 124444322 578997
Q ss_pred ccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECC-CCcEEEeeecCCCCCcccceEEEEE-CCEEEEEe
Q 006334 171 PAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMN-SLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIG 247 (650)
Q Consensus 171 i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~-t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~G 247 (650)
+. .+.....+.++.. ++.+|+.+.. ..+++.+.+ ..+|+.+.. +.++.....++++.. ++.+|+.|
T Consensus 199 ~~----~~~~~~~~~~~~~~~g~~~~~~~~------G~~~~s~~D~G~tW~~~~~-~~~~~~~~~~~v~~~~~~~~~~~g 267 (327)
T 2xbg_A 199 HN----RTTSRRLHNMGFTPDGRLWMIVNG------GKIAFSDPDNSENWGELLS-PLRRNSVGFLDLAYRTPNEVWLAG 267 (327)
T ss_dssp EE----CCSSSCEEEEEECTTSCEEEEETT------TEEEEEETTEEEEECCCBC-TTSSCCSCEEEEEESSSSCEEEEE
T ss_pred CC----CCCCCccceeEECCCCCEEEEeCC------ceEEEecCCCCCeeEeccC-CcccCCcceEEEEecCCCEEEEEe
Confidence 64 1223333444432 4678877641 235555433 567988752 112222222333333 46788887
Q ss_pred ccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCeEEEEcC
Q 006334 248 GVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT-GSDIVIYGG 298 (650)
Q Consensus 248 G~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~-~~~lyV~GG 298 (650)
+. ..+++-.-.-.+|+.+......+ .. .+.+++. ++.+++.|.
T Consensus 268 ~~------g~i~~S~DgG~tW~~~~~~~~~~-~~-~~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 268 GA------GALLCSQDGGQTWQQDVDVKKVP-SN-FYKILFFSPDQGFILGQ 311 (327)
T ss_dssp ST------TCEEEESSTTSSCEECGGGTTSS-SC-CCEEEEEETTEEEEECS
T ss_pred CC------CeEEEeCCCCcccEEcCccCCCC-CC-eEEEEEECCCceEEEcC
Confidence 62 23544333457899886421111 22 2344443 455665553
No 78
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.00 E-value=3.3 Score=46.20 Aligned_cols=123 Identities=15% Similarity=0.229 Sum_probs=68.5
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEEC-CCC--cEEEeecCCCC--C---CCCcceEEEEECCEEEEEcccCCCcCcC
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNL-DTM--VWSTLATTGQG--P---GPRDSHSAILWGHKMIVFGGTNGYKKVN 103 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~-~t~--sW~~l~~~g~~--P---~pR~~hsa~~~~~~lyVfGG~~~~~~~n 103 (650)
+.++.++.||+.... ...++.+|. .++ .|+.-...... + ......+.++.+++||+... ..
T Consensus 57 ~P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg 125 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NG 125 (571)
T ss_dssp CCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TS
T ss_pred ccEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CC
Confidence 456679999997652 246999998 665 48764322100 0 00112345667899988643 24
Q ss_pred eEEEEECCCC--cEEeeecCCCCCCC-CcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC--ceee
Q 006334 104 DLHILDLESK--EWMRPECRGAPPSP-RESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM--RWAS 170 (650)
Q Consensus 104 dv~~yD~~t~--~W~~l~~~~~~P~~-R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~--~Wt~ 170 (650)
.++.+|..+. .|+.- . ...+.. ....+-++. ++.+|+-.+..+ ...-..++.||..+. .|+.
T Consensus 126 ~l~alD~~tG~~~W~~~-~-~~~~~~~~~~~~P~v~-~g~v~vg~~~~~--~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVE-V-CDPKVGSTLTQAPFVA-KDTVLMGCSGAE--LGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp EEEEEETTTCCEEEEEE-C-CCGGGTCBCCSCCEEE-TTEEEEECBCGG--GTCCCEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCEEEEec-C-CCCCccceeccCCEEE-CCEEEEEecCCc--cCCCCEEEEEECCCCcEEEEE
Confidence 6999999887 48753 1 111100 111222333 678776443211 112356899998765 4764
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.96 E-value=2.8 Score=47.77 Aligned_cols=228 Identities=11% Similarity=0.019 Sum_probs=113.7
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
++.+++.|+.+ ..+.+||..++.....-.. . .......+...+++.+++|+.+ ..+.+||..+.+..
T Consensus 24 ~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~-~--~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 24 TEPWVLTTLYS-----GRVEIWNYETQVEVRSIQV-T--ETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKV 90 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEEC-C--SSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceEEEEec-C--CCcEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEE
Confidence 35566666632 4688999988765443221 1 1111222222356677777753 46889999888765
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC-ceeeccccCCCCCCCCcceeeee--cCEE
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM-RWASPAVKGDIPVPRDSHSSNVI--ANRL 193 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~-~Wt~i~~~~~lP~~R~~hs~v~~--~~~I 193 (650)
..-. + ....-.++....++..++.|+.+ ..+.+||+.++ .....- . .. ...-.+++.. ++.+
T Consensus 91 ~~~~-~---~~~~v~~~~~s~~~~~l~~~~~d-------g~i~vw~~~~~~~~~~~~-~-~~--~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 91 VDFE-A---HPDYIRSIAVHPTKPYVLSGSDD-------LTVKLWNWENNWALEQTF-E-GH--EHFVMCVAFNPKDPST 155 (814)
T ss_dssp EEEE-C---CSSCEEEEEECSSSSEEEEEETT-------SEEEEEEGGGTSEEEEEE-E-CC--SSCEEEEEEETTEEEE
T ss_pred EEEe-c---CCCCEEEEEEeCCCCEEEEEcCC-------CEEEEEECCCCceEEEEE-c-CC--CCcEEEEEEEcCCCCE
Confidence 4211 1 11122333444456667777653 35788888765 222211 0 11 1111222232 4567
Q ss_pred EEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE---CCEEEEEeccCCCcccCeEEEEECCCCcEEE
Q 006334 194 FVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI---GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~---~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~ 270 (650)
++.|+.+ ..+..||+.+..-...... ........++.. ++.+++.|+.+ ..+.+||+.+..-..
T Consensus 156 l~~~~~d-----g~v~vwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~ 222 (814)
T 3mkq_A 156 FASGCLD-----RTVKVWSLGQSTPNFTLTT---GQERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVA 222 (814)
T ss_dssp EEEEETT-----SEEEEEETTCSSCSEEEEC---CCTTCCCEEEECCSTTCCEEEEECTT-----SEEEEEETTTTEEEE
T ss_pred EEEEeCC-----CeEEEEECCCCcceeEEec---CCCCCEEEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcEEE
Confidence 7777755 4788999865542222111 111111222222 56677777643 368999988765433
Q ss_pred eecCCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 271 LDTCGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 271 l~~~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
.-. ...... .++++. ++.+++.|+.+ ..+.++++.
T Consensus 223 ~~~---~~~~~v-~~~~~~~~~~~l~~~~~d------g~v~vwd~~ 258 (814)
T 3mkq_A 223 TLE---GHMSNV-SFAVFHPTLPIIISGSED------GTLKIWNSS 258 (814)
T ss_dssp EEE---CCSSCE-EEEEECSSSSEEEEEETT------SCEEEEETT
T ss_pred EEc---CCCCCE-EEEEEcCCCCEEEEEeCC------CeEEEEECC
Confidence 211 011111 122222 45677777642 245666654
No 80
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.93 E-value=2.9 Score=42.61 Aligned_cols=156 Identities=13% Similarity=0.019 Sum_probs=81.8
Q ss_pred cCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCC
Q 006334 102 VNDLHILDLESKEWMRPECRGAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVP 180 (650)
Q Consensus 102 ~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~ 180 (650)
...++.+|+.+.+...+.. ............ ++..+++... .........+|.+|+....+..+.. ..+
T Consensus 167 ~~~l~~~d~~~g~~~~~~~-----~~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~----~~~ 236 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQ-----DTAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE----HAE 236 (396)
T ss_dssp CEEEEEEETTTCCEEEEEE-----ESSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC----CCT
T ss_pred cceEEEEECCCCcEEeecc-----CCcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec----cCC
Confidence 3579999999988776531 112223333343 3443333222 1112223579999998877766541 111
Q ss_pred CCcc-eeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCC------
Q 006334 181 RDSH-SSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGD------ 251 (650)
Q Consensus 181 R~~h-s~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~------ 251 (650)
.... ..... +++.+++...........++++|+.+.+...+.. .+. .. ..... +++++++++...
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~---~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~ 310 (396)
T 3c5m_A 237 GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV---MPP--CS-HLMSNFDGSLMVGDGCDAPVDVAD 310 (396)
T ss_dssp TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE---CCS--EE-EEEECSSSSEEEEEECCC------
T ss_pred CccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee---CCC--CC-CCccCCCCceEEEecCCcceeecc
Confidence 1111 11222 4443334333222222459999999888777653 221 11 23333 666666654321
Q ss_pred -----CcccCeEEEEECCCCcEEEeec
Q 006334 252 -----KHYYNDIWILNVSTCSWSQLDT 273 (650)
Q Consensus 252 -----~~~~~dv~~yD~~t~~W~~l~~ 273 (650)
......+|.+|+.+.....+..
T Consensus 311 ~~~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 311 ADSYNIENDPFLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp ----CCCCCCEEEEEETTTTBCCEEEE
T ss_pred ccccccCCCCcEEEEecccCceEEccC
Confidence 1123679999999887766653
No 81
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.92 E-value=2.2 Score=48.56 Aligned_cols=260 Identities=10% Similarity=-0.028 Sum_probs=129.4
Q ss_pred ECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCC-CCC--CcceEEEEECCEEEEEcccCCCcCcCeEEEEECCC
Q 006334 36 SHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQG-PGP--RDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 36 ~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~-P~p--R~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
.++++|.+=- ........+|+.+.....|+.+...... ... ........-+++.++|+...+......++++|+.+
T Consensus 82 dG~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 82 KGKRYFYFYN-TGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp ETTEEEEEEE-CSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred ECCEEEEEEE-cCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 3455554422 1223446789988877778766322110 001 11111222366766666443323334899999999
Q ss_pred CcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCC---------CcccceEEEEecCCCceeeccccCCCCCCCCc
Q 006334 113 KEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGE---------ANYLNDLHVLDLKTMRWASPAVKGDIPVPRDS 183 (650)
Q Consensus 113 ~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~---------~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~ 183 (650)
++........ .. ....+...|++.++++...... ......++++++.+..............+...
T Consensus 161 g~~~~~~~~~----~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~ 235 (710)
T 2xdw_A 161 AKELPDVLER----VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWM 235 (710)
T ss_dssp TEEEEEEEEE----EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred CCCCcccccC----cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEE
Confidence 9887642111 11 1233444466655555443210 12345699999887764311100111112222
Q ss_pred ceeee-ecCEEEEEeccCCCCccCeEEEEECCC------C--cEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcc
Q 006334 184 HSSNV-IANRLFVYGGDCGDQYHGDIDMLDMNS------L--TWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHY 254 (650)
Q Consensus 184 hs~v~-~~~~Iyv~GG~~~~~~~n~v~~yd~~t------~--~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~ 254 (650)
..... -+++.+++.........++++.+|+.+ . .|..+... .... .......+++||+.+..+ ..
T Consensus 236 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~---~~~~-~~~~s~dg~~l~~~s~~~--~~ 309 (710)
T 2xdw_A 236 GGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN---FEGE-YDYVTNEGTVFTFKTNRH--SP 309 (710)
T ss_dssp EEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS---SSSC-EEEEEEETTEEEEEECTT--CT
T ss_pred EEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC---CCcE-EEEEeccCCEEEEEECCC--CC
Confidence 22222 244544444332222357899999876 4 57777621 1111 122233456888886532 23
Q ss_pred cCeEEEEECCCC---cEEEeecCCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEec
Q 006334 255 YNDIWILNVSTC---SWSQLDTCGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQL 314 (650)
Q Consensus 255 ~~dv~~yD~~t~---~W~~l~~~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l 314 (650)
...|+.+|+.+. .|+.+... .. ...-..+... ++.+++....+ ....++++++
T Consensus 310 ~~~l~~~d~~~~~~~~~~~l~~~--~~-~~~~~~~~~~~~~~lv~~~~~~----g~~~l~~~~~ 366 (710)
T 2xdw_A 310 NYRLINIDFTDPEESKWKVLVPE--HE-KDVLEWVACVRSNFLVLCYLHD----VKNTLQLHDL 366 (710)
T ss_dssp TCEEEEEETTSCCGGGCEEEECC--CS-SCEEEEEEEETTTEEEEEEEET----TEEEEEEEET
T ss_pred CCEEEEEeCCCCCcccceeccCC--CC-CCeEEEEEEEcCCEEEEEEEEC----CEEEEEEEEC
Confidence 468999999876 58887532 11 1122233444 55666654321 1235677776
No 82
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.82 E-value=0.55 Score=54.15 Aligned_cols=195 Identities=11% Similarity=0.078 Sum_probs=99.9
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-EC--CEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WG--HKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~--~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
++.+++.||.+ ..+.+||..+.++..+..... ....-.++.+ .+ +.+++.|+.++ .+.++|+.+.
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~--h~~~V~~l~~s~~~~~~~l~s~s~Dg-----~I~vwd~~~~ 87 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTG--HEGPVWRVDWAHPKFGTILASCSYDG-----KVLIWKEENG 87 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEECC--CSSCEEEEEECCTTSCSEEEEEETTS-----CEEEEEEETT
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceeccC--CcCceEEEEecCCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 35666667653 368888887777766644311 0111123333 23 67777787644 5788888888
Q ss_pred cEEeeecCCCCCCCCcccEEEEEcC--CEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--
Q 006334 114 EWMRPECRGAPPSPRESHTATLVGD--DKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-- 189 (650)
Q Consensus 114 ~W~~l~~~~~~P~~R~~hs~~~~~~--~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-- 189 (650)
+|..+...... ...-.++....+ +.+++.|+.+ ..+.+||+.+..-.........+.. -.++...
T Consensus 88 ~~~~~~~~~~h--~~~V~~v~~sp~~~~~~l~sgs~d-------g~I~vwdl~~~~~~~~~~~~~~~~~--v~~l~~~p~ 156 (753)
T 3jro_A 88 RWSQIAVHAVH--SASVNSVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAIG--VNSASWAPA 156 (753)
T ss_dssp EEEEEEEECCC--SSCEEEEEECCGGGCSEEEEEETT-------SEEEEEECCSSSCCCCEEEECCSSC--EEEEEECCC
T ss_pred cccccccccCC--CCCeEEEEECCCCCCCEEEEEeCC-------CcEEEEEeecCCCcceeEeecCCCc--eEEEEecCc
Confidence 87665322111 122223333334 6778888763 3588888876522111100011111 1111111
Q ss_pred ------------cCEEEEEeccCCCCccCeEEEEECCCC--cEEEeeecCCCCCcccceEEEE-EC---CEEEEEeccCC
Q 006334 190 ------------ANRLFVYGGDCGDQYHGDIDMLDMNSL--TWSRLAIIGSSPGVRAGHAAIN-IG---TKVYIIGGVGD 251 (650)
Q Consensus 190 ------------~~~Iyv~GG~~~~~~~n~v~~yd~~t~--~W~~i~~~g~~P~~R~~~s~v~-~~---~~IyI~GG~~~ 251 (650)
++.+++.|+.++ .+..||+.+. .+..+...... ...-.+++. .+ +.+++.||.++
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h--~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGH--SDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp C---------CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCC--SSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred ccccccccccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCC--CCcEEEEEeccCCCCCCEEEEEecCC
Confidence 356677777553 5777776543 44444422111 111122222 23 67888887643
Q ss_pred CcccCeEEEEECCCC
Q 006334 252 KHYYNDIWILNVSTC 266 (650)
Q Consensus 252 ~~~~~dv~~yD~~t~ 266 (650)
.+.+||+.+.
T Consensus 230 -----~I~iwd~~~~ 239 (753)
T 3jro_A 230 -----TCIIWTQDNE 239 (753)
T ss_dssp -----CEEEEEESSS
T ss_pred -----EEEEecCCCC
Confidence 5788888765
No 83
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.81 E-value=4 Score=41.40 Aligned_cols=228 Identities=11% Similarity=0.056 Sum_probs=109.4
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCc-
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKE- 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~- 114 (650)
++.+++.|+.+ ..+.++|..+..-....... ...-.++++ .++.+++.||.+ ..+.+||+.+..
T Consensus 66 d~~~l~s~s~D-----g~v~iWd~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~s~~~d-----~~v~iw~~~~~~~ 131 (340)
T 1got_B 66 DSRLLLSASQD-----GKLIIWDSYTTNKVHAIPLR----SSWVMTCAYAPSGNYVACGGLD-----NICSIYNLKTREG 131 (340)
T ss_dssp TSSEEEEEETT-----TEEEEEETTTCCEEEEEECS----SSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTCSB
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCcceEeecC----CccEEEEEECCCCCEEEEEeCC-----CeEEEEECccCCC
Confidence 35666666654 36888898776543322210 111122222 256777778764 357788877643
Q ss_pred -EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCE
Q 006334 115 -WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANR 192 (650)
Q Consensus 115 -W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~ 192 (650)
.......... ...-..+....++. ++.|+.+ ..+.+||+.+.+-...- .+ . ...-.++... ++.
T Consensus 132 ~~~~~~~~~~h--~~~v~~~~~~~~~~-l~s~s~d-------~~i~~wd~~~~~~~~~~-~~--h-~~~v~~~~~~~~~~ 197 (340)
T 1got_B 132 NVRVSRELAGH--TGYLSCCRFLDDNQ-IVTSSGD-------TTCALWDIETGQQTTTF-TG--H-TGDVMSLSLAPDTR 197 (340)
T ss_dssp SCEEEEEEECC--SSCEEEEEEEETTE-EEEEETT-------SCEEEEETTTTEEEEEE-CC--C-SSCEEEEEECTTSS
T ss_pred cceeEEEecCC--CccEEEEEECCCCc-EEEEECC-------CcEEEEECCCCcEEEEE-cC--C-CCceEEEEECCCCC
Confidence 1111000000 11112222333455 4555542 24788898876543211 00 0 1111122222 466
Q ss_pred EEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCcccCeEEEEECCCCcEEEe
Q 006334 193 LFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQL 271 (650)
Q Consensus 193 Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l 271 (650)
+++.|+.+ ..+..||+.+..-...- . . .. ..-.+++. .++.+++.|+.++ .+.+||+.+.+-...
T Consensus 198 ~l~sg~~d-----~~v~~wd~~~~~~~~~~-~-~-h~-~~v~~v~~~p~~~~l~s~s~d~-----~v~iwd~~~~~~~~~ 263 (340)
T 1got_B 198 LFVSGACD-----ASAKLWDVREGMCRQTF-T-G-HE-SDINAICFFPNGNAFATGSDDA-----TCRLFDLRADQELMT 263 (340)
T ss_dssp EEEEEETT-----SCEEEEETTTCSEEEEE-C-C-CS-SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEE
T ss_pred EEEEEeCC-----CcEEEEECCCCeeEEEE-c-C-Cc-CCEEEEEEcCCCCEEEEEcCCC-----cEEEEECCCCcEEEE
Confidence 77777765 47888998776533221 0 1 01 11112222 2456777776543 588899887653322
Q ss_pred ecCCCCCCCcceeEEEEE--CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 272 DTCGQQPQGRFSHAAVVT--GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 272 ~~~~~~p~~R~~hsav~~--~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
-. .......-.++.+ ++.+++.|+.+ ..+.++++.
T Consensus 264 ~~---~~~~~~~v~~~~~s~~g~~l~~g~~d------~~i~vwd~~ 300 (340)
T 1got_B 264 YS---HDNIICGITSVSFSKSGRLLLAGYDD------FNCNVWDAL 300 (340)
T ss_dssp EC---CTTCCSCEEEEEECTTSSEEEEEETT------SEEEEEETT
T ss_pred Ec---cCCcccceEEEEECCCCCEEEEECCC------CeEEEEEcc
Confidence 11 1111112222222 56677777642 346666654
No 84
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.74 E-value=0.88 Score=50.91 Aligned_cols=241 Identities=12% Similarity=0.008 Sum_probs=121.9
Q ss_pred cceEEEEECC--C-CcEEEeecCCCCC-CCCcceEEEEECCEEEEEcccCCC-----cCcCeEEEEECCC------CcEE
Q 006334 52 FGDVLMLNLD--T-MVWSTLATTGQGP-GPRDSHSAILWGHKMIVFGGTNGY-----KKVNDLHILDLES------KEWM 116 (650)
Q Consensus 52 ~~dv~~yD~~--t-~sW~~l~~~g~~P-~pR~~hsa~~~~~~lyVfGG~~~~-----~~~ndv~~yD~~t------~~W~ 116 (650)
...+|.+|.. . .....+....... ..+....+..-+++.+++...+.. ....+++.+|+.+ ...+
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee
Confidence 3579999987 3 5555554321100 112222333336665555554311 2246899999988 6666
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCc-ccceEEEEecC-CC---ceeeccccCCCCCCCCcceeeee-c
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEAN-YLNDLHVLDLK-TM---RWASPAVKGDIPVPRDSHSSNVI-A 190 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~-~~~dv~~yd~~-t~---~Wt~i~~~~~lP~~R~~hs~v~~-~ 190 (650)
.+.. .............+++.+++...+..... ...+++++|++ +. ....+... . .......... +
T Consensus 181 ~l~~----~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~---~-~~~~~~~~~spd 252 (662)
T 3azo_A 181 ELSD----DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG---P-EEAIAQAEWAPD 252 (662)
T ss_dssp ESSC----SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE---T-TBCEEEEEECTT
T ss_pred EEEe----cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC---C-CceEcceEECCC
Confidence 5420 11122233344456766655554321111 12579999998 56 33333210 0 1111222222 5
Q ss_pred CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCC-C--CCccc-ceEEEEE-CCEEEEEeccCCCcccCeEEEEECCC
Q 006334 191 NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGS-S--PGVRA-GHAAINI-GTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 191 ~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~-~--P~~R~-~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
+++|+.+..++ ...+|++|+.+.+|..+..... . |.-.. ....+.. ++++++.+.. ....+|.+|+.+
T Consensus 253 g~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~d~~~ 325 (662)
T 3azo_A 253 GSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK----GAAVLGILDPES 325 (662)
T ss_dssp SCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS----SSCEEEEEETTT
T ss_pred CeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc----CccEEEEEECCC
Confidence 66776665432 2479999998888887753110 0 00000 1123333 5677766543 346899999998
Q ss_pred CcEEEeecCCCCCCCcceeEE-EEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 266 CSWSQLDTCGQQPQGRFSHAA-VVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 266 ~~W~~l~~~~~~p~~R~~hsa-v~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
.....+.. ..... ... ...++.+++..+... ...++|.+++.
T Consensus 326 ~~~~~l~~----~~~~~-~~~~s~~~~~~~~~~~~~~---~~~~i~~~d~~ 368 (662)
T 3azo_A 326 GELVDAAG----PWTEW-AATLTVSGTRAVGVAASPR---TAYEVVELDTV 368 (662)
T ss_dssp TEEEECCS----SCCEE-EEEEEEETTEEEEEEEETT---EEEEEEEEETT
T ss_pred CcEEEecC----CCCeE-EEEEecCCCEEEEEEcCCC---CCCEEEEEECC
Confidence 88777643 11111 122 334556655543221 23467777764
No 85
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.68 E-value=1.7 Score=45.85 Aligned_cols=186 Identities=20% Similarity=0.212 Sum_probs=98.8
Q ss_pred EEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEec
Q 006334 84 ILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDL 163 (650)
Q Consensus 84 ~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~ 163 (650)
...++..++.|+.++ .+.+||..+.+-...- .+ . . ....++..++.+++.|+.+ ..+.+||+
T Consensus 139 ~~~d~~~l~~g~~dg-----~i~iwd~~~~~~~~~~-~~-h---~-~~v~~l~~~~~~l~sg~~d-------g~i~vwd~ 200 (435)
T 1p22_A 139 LQYDDQKIVSGLRDN-----TIKIWDKNTLECKRIL-TG-H---T-GSVLCLQYDERVIITGSSD-------STVRVWDV 200 (435)
T ss_dssp EECCSSEEEEEESSS-----CEEEEESSSCCEEEEE-CC-C---S-SCEEEEECCSSEEEEEETT-------SCEEEEES
T ss_pred EEECCCEEEEEeCCC-----eEEEEeCCCCeEEEEE-cC-C---C-CcEEEEEECCCEEEEEcCC-------CeEEEEEC
Confidence 344777788887643 6888998877654321 11 1 1 1112222267788888763 35888898
Q ss_pred CCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEE
Q 006334 164 KTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKV 243 (650)
Q Consensus 164 ~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~I 243 (650)
.+.+....- ......-..+..++.+++.|+.+ ..+..||+.+..-..... ..........++..++..
T Consensus 201 ~~~~~~~~~-----~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 268 (435)
T 1p22_A 201 NTGEMLNTL-----IHHCEAVLHLRFNNGMMVTCSKD-----RSIAVWDMASPTDITLRR--VLVGHRAAVNVVDFDDKY 268 (435)
T ss_dssp SSCCEEEEE-----CCCCSCEEEEECCTTEEEEEETT-----SCEEEEECSSSSCCEEEE--EECCCSSCEEEEEEETTE
T ss_pred CCCcEEEEE-----cCCCCcEEEEEEcCCEEEEeeCC-----CcEEEEeCCCCCCceeee--EecCCCCcEEEEEeCCCE
Confidence 876543211 11112223334455677777755 478889987654221110 001112223334446666
Q ss_pred EEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 244 YIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 244 yI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
++.|+.+ ..+.+||+.+.+-...-. .....-.++..++.+++.|+.+ ..+.++++.
T Consensus 269 l~s~~~d-----g~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~g~~d------g~i~iwd~~ 324 (435)
T 1p22_A 269 IVSASGD-----RTIKVWNTSTCEFVRTLN-----GHKRGIACLQYRDRLVVSGSSD------NTIRLWDIE 324 (435)
T ss_dssp EEEEETT-----SEEEEEETTTCCEEEEEE-----CCSSCEEEEEEETTEEEEEETT------SCEEEEETT
T ss_pred EEEEeCC-----CeEEEEECCcCcEEEEEc-----CCCCcEEEEEeCCCEEEEEeCC------CeEEEEECC
Confidence 6666643 468899998875433211 0111223344466777777743 356777765
No 86
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.67 E-value=4.5 Score=44.01 Aligned_cols=184 Identities=17% Similarity=0.260 Sum_probs=101.2
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCc--
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKE-- 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~-- 114 (650)
++.+|+|-| +..|+||..+++.....-.+ . +. --++....+++|+|=| +..|+||..+.+
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~g-i--~~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~ 219 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPA-V--GN-CTSALRWLGRYYCFQG-------NQFLRFNPVSGEVP 219 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTT-S--CC-CSEEEEETTEEEEEET-------TEEEEECTTTCCCC
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCC-C--Cc-cchheeeCCceEEEEC-------CEEEEEcCccCccc
Confidence 678899988 46899999887655321111 1 22 2345555799999988 578899876543
Q ss_pred ----------EEeeecCC------------CCC---C-CCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCce
Q 006334 115 ----------WMRPECRG------------APP---S-PRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRW 168 (650)
Q Consensus 115 ----------W~~l~~~~------------~~P---~-~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~W 168 (650)
|..+...+ ..| . .....+++...++++|+|-|. ..|++|.....+
T Consensus 220 ~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~---------~yWR~~~~~~~~ 290 (460)
T 1qhu_A 220 PGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS---------HYWRLDTNRDGW 290 (460)
T ss_dssp TTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT---------EEEECTTGGGCC
T ss_pred CCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC---------EEEEEecCCCCc
Confidence 21110000 000 0 112233333246899998774 367776544333
Q ss_pred eecccc---CCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeee--------cCCCCCc----ccc
Q 006334 169 ASPAVK---GDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAI--------IGSSPGV----RAG 233 (650)
Q Consensus 169 t~i~~~---~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~--------~g~~P~~----R~~ 233 (650)
....+. ..+|.. --++...++++|+|=| +.+|+|+..+. .+.+.. .| +|.. +-.
T Consensus 291 ~p~~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lG-lp~~~~~~~ID 359 (460)
T 1qhu_A 291 HSWPIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELG-SPPVISLEAVD 359 (460)
T ss_dssp CCEEGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHC-CCSSCCCSCCC
T ss_pred CccchhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhcc-CCCccccCccc
Confidence 211111 133432 2344445789999977 67899986531 222210 11 2222 122
Q ss_pred eEEEE-ECCEEEEEeccCCCcccCeEEEEECCC
Q 006334 234 HAAIN-IGTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 234 ~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
++... ..+++|+|-| +..|+||...
T Consensus 360 AA~~~~~~~ktyfFkG-------~~ywryd~~~ 385 (460)
T 1qhu_A 360 AAFVCPGSSRLHIMAG-------RRLWWLDLKS 385 (460)
T ss_dssp EEECCTTCCEEEEEET-------TEEEEEEGGG
T ss_pred EEEEeCCCCEEEEEEC-------CEEEEEECCC
Confidence 22222 2469999977 4789999874
No 87
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.63 E-value=5 Score=42.04 Aligned_cols=147 Identities=7% Similarity=0.068 Sum_probs=76.5
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
+.+++.|+.++ .+.+||..+......-.. . ...-.++++. ++++++.|+.++ .+.++|+.+.+-.
T Consensus 120 ~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l~~-h---~~~V~~v~~~~~~~~l~sgs~D~-----~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 120 FSVMVSASEDA-----TIKVWDYETGDFERTLKG-H---TDSVQDISFDHSGKLLASCSADM-----TIKLWDFQGFECI 185 (410)
T ss_dssp SSEEEEEESSS-----CEEEEETTTCCCCEEECC-C---SSCEEEEEECTTSSEEEEEETTS-----CCCEEETTSSCEE
T ss_pred CCEEEEEeCCC-----eEEEEECCCCcEEEEEec-c---CCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCcee
Confidence 56777777543 588899887754332111 1 1111222332 567788887654 3566777665543
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEE
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLF 194 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iy 194 (650)
.. . ......-.++....++..++.|+.+ ..+.+||+.+..-...- .+ .......+.. ++.++
T Consensus 186 ~~--~--~~h~~~V~~v~~~p~~~~l~s~s~D-------~~i~~wd~~~~~~~~~~-~~----h~~~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 186 RT--M--HGHDHNVSSVSIMPNGDHIVSASRD-------KTIKMWEVQTGYCVKTF-TG----HREWVRMVRPNQDGTLI 249 (410)
T ss_dssp EC--C--CCCSSCEEEEEECSSSSEEEEEETT-------SEEEEEETTTCCEEEEE-EC----CSSCEEEEEECTTSSEE
T ss_pred EE--E--cCCCCCEEEEEEeCCCCEEEEEeCC-------CeEEEEECCCCcEEEEE-eC----CCccEEEEEECCCCCEE
Confidence 31 0 0111112233333456677777763 35888898776533211 01 1111112222 46677
Q ss_pred EEeccCCCCccCeEEEEECCCCcEE
Q 006334 195 VYGGDCGDQYHGDIDMLDMNSLTWS 219 (650)
Q Consensus 195 v~GG~~~~~~~n~v~~yd~~t~~W~ 219 (650)
+.|+.+ ..+..||+.+....
T Consensus 250 ~s~s~D-----~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 250 ASCSND-----QTVRVWVVATKECK 269 (410)
T ss_dssp EEEETT-----SCEEEEETTTCCEE
T ss_pred EEEcCC-----CeEEEEECCCCcee
Confidence 777765 36788888776543
No 88
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.58 E-value=3.7 Score=46.82 Aligned_cols=124 Identities=15% Similarity=0.163 Sum_probs=68.7
Q ss_pred EEEECCEEEEEcccCCCcCcCeEEEEECCCCc--EEeeecCCCCCCC-----CcccEEEEEcCCEEEEEccccCCCCccc
Q 006334 83 AILWGHKMIVFGGTNGYKKVNDLHILDLESKE--WMRPECRGAPPSP-----RESHTATLVGDDKMVIFGGSGEGEANYL 155 (650)
Q Consensus 83 a~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~--W~~l~~~~~~P~~-----R~~hs~~~~~~~~Lyv~GG~~~~~~~~~ 155 (650)
-++.++.||+... .+.++.+|..+.+ |+.-........+ ....+.++ .+++||+....
T Consensus 73 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~v~v~~~d-------- 137 (677)
T 1kb0_A 73 PVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL-WKGKVYVGAWD-------- 137 (677)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE-ETTEEEEECTT--------
T ss_pred CEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE-ECCEEEEEcCC--------
Confidence 3567999999765 2579999998874 8763110000000 01122333 46788775321
Q ss_pred ceEEEEecCCC--ceeeccccCCCCC-CCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCc--EEEee
Q 006334 156 NDLHVLDLKTM--RWASPAVKGDIPV-PRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLT--WSRLA 222 (650)
Q Consensus 156 ~dv~~yd~~t~--~Wt~i~~~~~lP~-~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~--W~~i~ 222 (650)
..++.+|..++ .|+.-... .... .....+.++.++.+|+..+.........++.||..+.+ |+.-.
T Consensus 138 g~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 138 GRLIALDAATGKEVWHQNTFE-GQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp SEEEEEETTTCCEEEEEETTT-TCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEECCCCCEEeeecCCc-CcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 35899998766 48752210 1110 11222344567888775442222234679999998765 87644
No 89
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.58 E-value=1.1 Score=45.97 Aligned_cols=184 Identities=7% Similarity=0.054 Sum_probs=92.6
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.+++.||.++ .+.+||..++.|........ .....-.++++ .++++++.|+.++ .+.++|..+..+
T Consensus 27 ~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~~~~ 95 (345)
T 3fm0_A 27 AGTLLASCGGDR-----RIRIWGTEGDSWICKSVLSE-GHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQDDF 95 (345)
T ss_dssp TSSCEEEEETTS-----CEEEEEEETTEEEEEEEECS-SCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECCC-E
T ss_pred CCCEEEEEcCCC-----eEEEEEcCCCcceeeeeecc-ccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccCCCe
Confidence 467777777543 57788888887764322111 01111222333 2577777787654 456677777666
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc-eeeccccCCCCCCCCcceeeee--cCE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR-WASPAVKGDIPVPRDSHSSNVI--ANR 192 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~-Wt~i~~~~~lP~~R~~hs~v~~--~~~ 192 (650)
..+..-... ...-.++....++.+++.|+.+ ..+.+||+.+.. +..+.. +.........+.+ ++.
T Consensus 96 ~~~~~~~~h--~~~v~~v~~sp~~~~l~s~s~D-------~~v~iwd~~~~~~~~~~~~---~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 96 ECVTTLEGH--ENEVKSVAWAPSGNLLATCSRD-------KSVWVWEVDEEDEYECVSV---LNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEEEEECCC--SSCEEEEEECTTSSEEEEEETT-------SCEEEEEECTTSCEEEEEE---ECCCCSCEEEEEECSSSS
T ss_pred EEEEEccCC--CCCceEEEEeCCCCEEEEEECC-------CeEEEEECCCCCCeEEEEE---ecCcCCCeEEEEECCCCC
Confidence 543211111 1112233334467788888764 247788876542 322221 1111111122222 456
Q ss_pred EEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCC
Q 006334 193 LFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGD 251 (650)
Q Consensus 193 Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~ 251 (650)
+++.|+.+ ..+..||..+..|..+.....- ......+.+ ++++++.|+.++
T Consensus 164 ~l~s~s~d-----~~i~~w~~~~~~~~~~~~~~~h---~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 164 LLASASYD-----DTVKLYREEEDDWVCCATLEGH---ESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp CEEEEETT-----SCEEEEEEETTEEEEEEEECCC---SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEeCC-----CcEEEEEecCCCEEEEEEecCC---CCceEEEEECCCCCEEEEEeCCC
Confidence 77777755 3678888888888755432111 111222222 456777776543
No 90
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.49 E-value=0.2 Score=51.42 Aligned_cols=152 Identities=11% Similarity=0.083 Sum_probs=71.8
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCc-
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKE- 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~- 114 (650)
++.+++.|+.+ ..+.+||..++.|..+.....- ...-.++.+. ++++++.|+.++ .+.+||+.+..
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~d~-----~v~vwd~~~~~~ 89 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDH--DKIVTCVDWAPKSNRIVTCSQDR-----NAYVYEKRPDGT 89 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCC--SSCEEEEEECTTTCCEEEEETTS-----SEEEC------C
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEecC--CceEEEEEEeCCCCEEEEEeCCC-----eEEEEEcCCCCc
Confidence 45666667653 3577888888878776544210 1111222332 567777777543 57788887766
Q ss_pred EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc-eeeccccCCCCCCCCcceeeee-cCE
Q 006334 115 WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR-WASPAVKGDIPVPRDSHSSNVI-ANR 192 (650)
Q Consensus 115 W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~-Wt~i~~~~~lP~~R~~hs~v~~-~~~ 192 (650)
|........ ....-..+....++.+++.|+.+ ..+.+||+.+.. |..+..... +....-.++... ++.
T Consensus 90 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 90 WKQTLVLLR--LNRAATFVRWSPNEDKFAVGSGA-------RVISVCYFEQENDWWVSKHLKR-PLRSTILSLDWHPNNV 159 (377)
T ss_dssp CCCEEECCC--CSSCEEEEECCTTSSCCEEEESS-------SCEEECCC-----CCCCEEECS-SCCSCEEEEEECTTSS
T ss_pred eeeeeEecc--cCCceEEEEECCCCCEEEEEecC-------CeEEEEEECCcccceeeeEeec-ccCCCeEEEEEcCCCC
Confidence 443311111 11222233333456777777763 247788887654 433221111 011111222222 456
Q ss_pred EEEEeccCCCCccCeEEEEECCC
Q 006334 193 LFVYGGDCGDQYHGDIDMLDMNS 215 (650)
Q Consensus 193 Iyv~GG~~~~~~~n~v~~yd~~t 215 (650)
+++.|+.+ ..+..||+.+
T Consensus 160 ~l~~~~~d-----~~i~iwd~~~ 177 (377)
T 3dwl_C 160 LLAAGCAD-----RKAYVLSAYV 177 (377)
T ss_dssp EEEEEESS-----SCEEEEEECC
T ss_pred EEEEEeCC-----CEEEEEEEEe
Confidence 77777765 3677888753
No 91
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.48 E-value=4.4 Score=40.45 Aligned_cols=235 Identities=10% Similarity=0.044 Sum_probs=118.0
Q ss_pred CEEEEEccCCC-CcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-C-CEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 38 GAVYIFGGCCG-GLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-G-HKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 38 ~~IyvfGG~~~-~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~-~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
+.||+...... ....+.++++|+.+.+.......+. + .+.+++. + +.+|+.+..+ +.++.||+.+.+
T Consensus 53 ~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~-~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~ 122 (353)
T 3vgz_A 53 NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL----K-PFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGE 122 (353)
T ss_dssp TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS----C-CCSEEEETTTTEEEEEETTT-----TEEEEEETTTCC
T ss_pred CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC----C-cceEEECCCCCEEEEEecCC-----CEEEEEeCCCCe
Confidence 47777553211 1225679999998876544333221 1 2233333 4 4577766532 479999999876
Q ss_pred EEe-eecCCCC-C---CCCcccEEEEEcC-CEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeee
Q 006334 115 WMR-PECRGAP-P---SPRESHTATLVGD-DKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNV 188 (650)
Q Consensus 115 W~~-l~~~~~~-P---~~R~~hs~~~~~~-~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~ 188 (650)
-.. +...... + .+..-+.+++..+ +.+|+.+... -..+++||+.+.+-...- .. ....-+.++.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~~i~~~d~~~~~~~~~~---~~-~~~~~~~~~~ 192 (353)
T 3vgz_A 123 VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK------ESVIWVVDGGNIKLKTAI---QN-TGKMSTGLAL 192 (353)
T ss_dssp EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS------SCEEEEEETTTTEEEEEE---CC-CCTTCCCCEE
T ss_pred eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC------CceEEEEcCCCCceEEEe---cC-CCCccceEEE
Confidence 432 2221100 0 0111233444444 4566654221 145999999876543321 10 1111222333
Q ss_pred e--cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECC
Q 006334 189 I--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVS 264 (650)
Q Consensus 189 ~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~ 264 (650)
. ++.+|+... .+.+++||+.+.+-......+..........++.. ++.+|+... ..+.+++||+.
T Consensus 193 s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~v~~~d~~ 261 (353)
T 3vgz_A 193 DSEGKRLYTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS-----KAAEVLVVDTR 261 (353)
T ss_dssp ETTTTEEEEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES-----SSSEEEEEETT
T ss_pred CCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC-----CCCEEEEEECC
Confidence 2 345666543 25788999988764433222111111222223333 346766642 23579999998
Q ss_pred CCcEEEeecCCCCCCCcceeEEEEE-CC-eEEEEcCCCCCCCCCCcEEEEecC
Q 006334 265 TCSWSQLDTCGQQPQGRFSHAAVVT-GS-DIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 265 t~~W~~l~~~~~~p~~R~~hsav~~-~~-~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
+.+....-.. +.+ ..+++. ++ .+|+.+.. .+.+.++++.
T Consensus 262 ~~~~~~~~~~---~~~---~~~~~s~dg~~l~v~~~~------~~~v~~~d~~ 302 (353)
T 3vgz_A 262 NGNILAKVAA---PES---LAVLFNPARNEAYVTHRQ------AGKVSVIDAK 302 (353)
T ss_dssp TCCEEEEEEC---SSC---CCEEEETTTTEEEEEETT------TTEEEEEETT
T ss_pred CCcEEEEEEc---CCC---ceEEECCCCCEEEEEECC------CCeEEEEECC
Confidence 8876543322 111 123333 44 47776542 2467777765
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.36 E-value=5.2 Score=40.77 Aligned_cols=203 Identities=6% Similarity=-0.043 Sum_probs=96.8
Q ss_pred ECCEEEEEccCCCCcccceEEEEECCCCc-------EEEeecCCCCCCCCcceEEEE-EC----C---EEEEEcccCCCc
Q 006334 36 SHGAVYIFGGCCGGLHFGDVLMLNLDTMV-------WSTLATTGQGPGPRDSHSAIL-WG----H---KMIVFGGTNGYK 100 (650)
Q Consensus 36 ~~~~IyvfGG~~~~~~~~dv~~yD~~t~s-------W~~l~~~g~~P~pR~~hsa~~-~~----~---~lyVfGG~~~~~ 100 (650)
....+++.|+.+ ..+.+||..+.. ...+... . ..-.++.+ .+ + .+++.|+.++
T Consensus 24 ~~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~h---~--~~v~~~~~~~~~~~~g~~~~~l~s~~~dg-- 91 (397)
T 1sq9_A 24 ACNSFTVSCSGD-----GYLKVWDNKLLDNENPKDKSYSHFVH---K--SGLHHVDVLQAIERDAFELCLVATTSFSG-- 91 (397)
T ss_dssp ECSSEEEEEETT-----SEEEEEESBCCTTCCGGGGEEEEECC---T--TCEEEEEEEEEEETTTEEEEEEEEEETTS--
T ss_pred ecCCeEEEEcCC-----CEEEEEECCCcccccCCCcceEEecC---C--CcEEEEEEecccccCCccccEEEEEcCCC--
Confidence 344666667653 368888988765 3333321 1 11122222 34 6 7888887643
Q ss_pred CcCeEEEEECCCCc------EEeeecCCCCCCCCcccEEEEE----cCCEE-EEEccccCCCCcccceEEEEecCC----
Q 006334 101 KVNDLHILDLESKE------WMRPECRGAPPSPRESHTATLV----GDDKM-VIFGGSGEGEANYLNDLHVLDLKT---- 165 (650)
Q Consensus 101 ~~ndv~~yD~~t~~------W~~l~~~~~~P~~R~~hs~~~~----~~~~L-yv~GG~~~~~~~~~~dv~~yd~~t---- 165 (650)
.+.+||+.+.. +..+...........-.++... .++.+ ++.|+.+ ..+.+||+.+
T Consensus 92 ---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 92 ---DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------GTTYIWKFHPFADE 161 (397)
T ss_dssp ---CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------SCEEEEEEESSSSH
T ss_pred ---CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------CcEEEEeCCccccc
Confidence 57777777665 6655211000001223344444 45666 7777763 3477788765
Q ss_pred --CceeeccccCCC--------CCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCC-CC-Cccc
Q 006334 166 --MRWASPAVKGDI--------PVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGS-SP-GVRA 232 (650)
Q Consensus 166 --~~Wt~i~~~~~l--------P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~-~P-~~R~ 232 (650)
..-........+ .....-.++... ++ +++.|+.+ ..+..||+.+.+....-.... .. ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCC
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCc
Confidence 221110000000 011112223333 35 66666654 478999998775443221100 00 0111
Q ss_pred ceEEEE-ECCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 233 GHAAIN-IGTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 233 ~~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
-.+++. .++++++.|+.++ ....+.+||+.+.+-
T Consensus 236 i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~~~ 270 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFGER 270 (397)
T ss_dssp EEEEEECSSTTEEEEEEEET--TEEEEEEEETTTCCE
T ss_pred cceEEECCCCCEEEEEecCC--CCceEEEEECCCCcc
Confidence 122222 2456777766431 114699999987653
No 93
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=94.34 E-value=3.8 Score=46.52 Aligned_cols=211 Identities=11% Similarity=0.092 Sum_probs=112.5
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCC--------cCcCeEEEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGY--------KKVNDLHIL 108 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~--------~~~ndv~~y 108 (650)
+++.+.|+-...+....+++++|+.++........ ..+....+.. +++-++++-.... .....+|++
T Consensus 139 Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~----~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~ 213 (693)
T 3iuj_A 139 DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK----DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFH 213 (693)
T ss_dssp TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE----EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEE
T ss_pred CCCEEEEEEecCCCceEEEEEEECCCCCCCccccC----CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEE
Confidence 35555553322233345899999999987654321 1122333344 6655555544322 345679999
Q ss_pred ECCCCcE--EeeecCCCCC-CCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC--ceeeccccCCCCCCCCc
Q 006334 109 DLESKEW--MRPECRGAPP-SPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM--RWASPAVKGDIPVPRDS 183 (650)
Q Consensus 109 D~~t~~W--~~l~~~~~~P-~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~--~Wt~i~~~~~lP~~R~~ 183 (650)
++.+..= ..+ ..... .+..........+++.+++.-... ...+++|++|+.+. .|..+. . +.. ..
T Consensus 214 ~lgt~~~~~~~v--~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~---~~~~~i~~~d~~~~~~~~~~l~---~-~~~-~~ 283 (693)
T 3iuj_A 214 RLGTAQEDDRLV--FGAIPAQHHRYVGATVTEDDRFLLISAANS---TSGNRLYVKDLSQENAPLLTVQ---G-DLD-AD 283 (693)
T ss_dssp ETTSCGGGCEEE--ESCSGGGCCSEEEEEECTTSCEEEEEEESS---SSCCEEEEEETTSTTCCCEEEE---C-SSS-SC
T ss_pred ECCCCcccceEE--EecCCCCCeEEEEEEEcCCCCEEEEEEccC---CCCcEEEEEECCCCCCceEEEe---C-CCC-ce
Confidence 9887642 122 11111 122233344444565444432211 12368999998765 677654 1 111 11
Q ss_pred ce-eeeecCEEEEEeccCCCCccCeEEEEECCCC---cEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEE
Q 006334 184 HS-SNVIANRLFVYGGDCGDQYHGDIDMLDMNSL---TWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIW 259 (650)
Q Consensus 184 hs-~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~---~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~ 259 (650)
.. ....++.+|+....+. ....++.+|+.+. .|+.+... ..... .....++.|++..-.+ ....++
T Consensus 284 ~~~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~---~~~~~--~~s~~g~~lv~~~~~~---g~~~l~ 353 (693)
T 3iuj_A 284 VSLVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPE---RQQVL--TVHSGSGYLFAEYMVD---ATARVE 353 (693)
T ss_dssp EEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECC---CSSCE--EEEEETTEEEEEEEET---TEEEEE
T ss_pred EEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEecC---CCCEE--EEEEECCEEEEEEEEC---CeeEEE
Confidence 12 2334678888876432 3468999998763 48876521 11111 4445566766553322 235789
Q ss_pred EEECCCCcEEEee
Q 006334 260 ILNVSTCSWSQLD 272 (650)
Q Consensus 260 ~yD~~t~~W~~l~ 272 (650)
++|+.......+.
T Consensus 354 ~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 354 QFDYEGKRVREVA 366 (693)
T ss_dssp EECTTSCEEEEEC
T ss_pred EEECCCCeeEEee
Confidence 9999877666554
No 94
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.30 E-value=4.2 Score=39.50 Aligned_cols=186 Identities=11% Similarity=-0.009 Sum_probs=97.4
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.||+.... .+.+++||+ +.......... ....-..+++. ++++|+..- ..+.+++||+ +.+.
T Consensus 109 ~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~-----~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 109 NGDIWFTEMN-----GNRIGRITD-DGKIREYELPN---KGSYPSFITLGSDNALWFTEN-----QNNAIGRITE-SGDI 173 (299)
T ss_dssp TSCEEEEETT-----TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECTTSCEEEEET-----TTTEEEEECT-TCCE
T ss_pred CCCEEEEecC-----CceEEEECC-CCCEEEecCCC---CCCCCceEEEcCCCCEEEEeC-----CCCEEEEEcC-CCcE
Confidence 4677775432 246888998 66665543221 11222344443 568887542 1257899999 7777
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCc-ceeeee-cCEE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDS-HSSNVI-ANRL 193 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~-hs~v~~-~~~I 193 (650)
..+..... ...-..++...++.||+.... .+.+++||+ ++.+..+. ++..... ..++.. ++.+
T Consensus 174 ~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~-~g~~~~~~----~~~~~~~~~~i~~~~~g~l 238 (299)
T 2z2n_A 174 TEFKIPTP---ASGPVGITKGNDDALWFVEII-------GNKIGRITT-SGEITEFK----IPTPNARPHAITAGAGIDL 238 (299)
T ss_dssp EEEECSST---TCCEEEEEECTTSSEEEEETT-------TTEEEEECT-TCCEEEEE----CSSTTCCEEEEEECSTTCE
T ss_pred EEeeCCCC---CCcceeEEECCCCCEEEEccC-------CceEEEECC-CCcEEEEE----CCCCCCCceeEEECCCCCE
Confidence 65422111 111223444445778876432 236889998 77666532 1111111 222222 4678
Q ss_pred EEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 194 FVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
|+.... .+.+.+||+ +.....+..... ...-.+++..++.||+... .+.+.+||+++++
T Consensus 239 ~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~---~~~~~~i~~~~g~l~v~~~------~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 239 WFTEWG-----ANKIGRLTS-NNIIEEYPIQIK---SAEPHGICFDGETIWFAME------CDKIGKLTLIKDN 297 (299)
T ss_dssp EEEETT-----TTEEEEEET-TTEEEEEECSSS---SCCEEEEEECSSCEEEEET------TTEEEEEEEC---
T ss_pred EEeccC-----CceEEEECC-CCceEEEeCCCC---CCccceEEecCCCEEEEec------CCcEEEEEcCccc
Confidence 876422 257999998 455555432111 1122333335567887742 2578899887653
No 95
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.26 E-value=1.6 Score=44.13 Aligned_cols=200 Identities=10% Similarity=0.147 Sum_probs=100.2
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-C--CEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-G--HKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~--~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
+.+++.|+.+ ..+.+||..++.|..+..... ....-.++.+. + +.+++.|+.++ .+.+||+.+..
T Consensus 69 ~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~ 136 (379)
T 3jrp_A 69 GTILASCSYD-----GKVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKENG 136 (379)
T ss_dssp CSEEEEEETT-----SCEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTTS
T ss_pred CCEEEEeccC-----CEEEEEEcCCCceeEeeeecC--CCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCCC
Confidence 5666666653 358889998888876654421 11122233332 3 56777776543 67888887763
Q ss_pred EE-eeecCCCCCCCCcccEEEEEc-------------CCEEEEEccccCCCCcccceEEEEecCCCc--eeeccccCCCC
Q 006334 115 WM-RPECRGAPPSPRESHTATLVG-------------DDKMVIFGGSGEGEANYLNDLHVLDLKTMR--WASPAVKGDIP 178 (650)
Q Consensus 115 W~-~l~~~~~~P~~R~~hs~~~~~-------------~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~--Wt~i~~~~~lP 178 (650)
.. ...... ....-.++.... ++.+++.|+.+ ..+.+||+.+.. |..+. .+.
T Consensus 137 ~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~---~~~ 203 (379)
T 3jrp_A 137 TTSPIIIDA---HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-------NLVKIWKYNSDAQTYVLES---TLE 203 (379)
T ss_dssp CCCEEEEEC---CTTCEEEEEECCCC----------CTTCEEEEEETT-------SCEEEEEEETTTTEEEEEE---EEC
T ss_pred ceeeEEecC---CCCceEEEEEcCccccccccccCCCCCCEEEEEeCC-------CeEEEEEecCCCcceeeEE---EEe
Confidence 21 111110 011112222222 46778888763 247788876543 44322 111
Q ss_pred CCCCc-ceeeee-c---CEEEEEeccCCCCccCeEEEEECCCCc--EEEeeecCCCCCcccceEEEE-ECCEEEEEeccC
Q 006334 179 VPRDS-HSSNVI-A---NRLFVYGGDCGDQYHGDIDMLDMNSLT--WSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVG 250 (650)
Q Consensus 179 ~~R~~-hs~v~~-~---~~Iyv~GG~~~~~~~n~v~~yd~~t~~--W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~ 250 (650)
..... .+++.. + +.+++.|+.++ .+.+||+.+.. +.... .........-.+++. .++++++.|+.+
T Consensus 204 ~h~~~v~~~~~sp~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 204 GHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCIIWTQDNEQGPWKKTL-LKEEKFPDVLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEETTS-----CEEEEEESSTTSCCEEEE-SSSSCCSSCEEEEEECSSSCCEEEEESS
T ss_pred cccCcEeEEEECCCCCCCCeEEEEeCCC-----EEEEEeCCCCCccceeee-eccccCCCcEEEEEEcCCCCEEEEecCC
Confidence 11111 122222 3 57778777653 57888877653 22211 101111111122222 345677776653
Q ss_pred CCcccCeEEEEECC-CCcEEEeec
Q 006334 251 DKHYYNDIWILNVS-TCSWSQLDT 273 (650)
Q Consensus 251 ~~~~~~dv~~yD~~-t~~W~~l~~ 273 (650)
..+.+||+. ...|..+..
T Consensus 278 -----g~i~iw~~~~~~~~~~~~~ 296 (379)
T 3jrp_A 278 -----NKVTLWKENLEGKWEPAGE 296 (379)
T ss_dssp -----SSEEEEEEEETTEEEEEEE
T ss_pred -----CcEEEEeCCCCCccccccc
Confidence 347777776 567887754
No 96
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.22 E-value=2.8 Score=41.90 Aligned_cols=108 Identities=11% Similarity=0.105 Sum_probs=59.4
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
+.+++.|+.+ ..+.+||..+..-...-.. . ...-.++.+. ++.+++.|+.++ .+.+||+.+.+.
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~-~---~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~ 150 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYVG-H---GNAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQTDTL 150 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEES-C---CSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTTTEE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeecC-C---CCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeecCeE
Confidence 4677777754 3688899887654332211 1 1112233332 567777777643 588899988765
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR 167 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~ 167 (650)
...-. ........-.++....++..++.|+.+ ..+.+||+.+.+
T Consensus 151 ~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~ 194 (366)
T 3k26_A 151 VAIFG-GVEGHRDEVLSADYDLLGEKIMSCGMD-------HSLKLWRINSKR 194 (366)
T ss_dssp EEEEC-STTSCSSCEEEEEECTTSSEEEEEETT-------SCEEEEESCSHH
T ss_pred EEEec-ccccccCceeEEEECCCCCEEEEecCC-------CCEEEEECCCCc
Confidence 44210 001112222333433456777777763 358888887643
No 97
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.21 E-value=5.4 Score=40.43 Aligned_cols=114 Identities=10% Similarity=-0.029 Sum_probs=51.5
Q ss_pred EEEEEccCCCCc-ccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCE-EEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 39 AVYIFGGCCGGL-HFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHK-MIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 39 ~IyvfGG~~~~~-~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~-lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
..+++|.+.... ..-.+|.+|..+.++..+... .. ....+.+..-+++ ||+.+..+.....-.+|.+|..+.+.+
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~--~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~ 90 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EV--ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH 90 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-EC--SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cC--CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEE
Confidence 344556664321 112355667788888776543 11 1112222233454 655543221111223456666667776
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCC
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKT 165 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t 165 (650)
.+... +..........+..+.||+.. ..+ ..+.+|++..
T Consensus 91 ~~~~~---~~~~~~p~~~~~dg~~l~~~~-~~~------~~v~~~~~~~ 129 (361)
T 3scy_A 91 LLNTQ---KTMGADPCYLTTNGKNIVTAN-YSG------GSITVFPIGQ 129 (361)
T ss_dssp EEEEE---ECSSSCEEEEEECSSEEEEEE-TTT------TEEEEEEBCT
T ss_pred EeeEe---ccCCCCcEEEEECCCEEEEEE-CCC------CEEEEEEeCC
Confidence 65221 111112222223334555543 321 3577888764
No 98
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.16 E-value=1.6 Score=45.00 Aligned_cols=183 Identities=12% Similarity=0.139 Sum_probs=91.0
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcC-CEEEEEccccCCCCcccceEEEEecCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGD-DKMVIFGGSGEGEANYLNDLHVLDLKT 165 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~-~~Lyv~GG~~~~~~~~~~dv~~yd~~t 165 (650)
+++.++.|+.++ .+.++|..+.+....- .+ ....-.++....+ +.+++.||.+ ..+.+||+.+
T Consensus 150 dg~~l~sgs~dg-----~v~iwd~~~~~~~~~~-~~---h~~~v~~v~~s~~~~~~~~s~~~d-------g~v~~wd~~~ 213 (357)
T 4g56_B 150 DGTQAVSGGKDF-----SVKVWDLSQKAVLKSY-NA---HSSEVNCVAACPGKDTIFLSCGED-------GRILLWDTRK 213 (357)
T ss_dssp SSSEEEEEETTS-----CEEEEETTTTEEEEEE-CC---CSSCEEEEEECTTCSSCEEEEETT-------SCEEECCTTS
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEE-cC---CCCCEEEEEEccCCCceeeeeccC-------CceEEEECCC
Confidence 667777787644 4788898887654320 11 0111122222233 3467777763 2477888876
Q ss_pred CceeeccccCCCCCCCCcceeeee---cCEEEEEeccCCCCccCeEEEEECCCCcEE-EeeecCCCCCcccceEEEEE--
Q 006334 166 MRWASPAVKGDIPVPRDSHSSNVI---ANRLFVYGGDCGDQYHGDIDMLDMNSLTWS-RLAIIGSSPGVRAGHAAINI-- 239 (650)
Q Consensus 166 ~~Wt~i~~~~~lP~~R~~hs~v~~---~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~-~i~~~g~~P~~R~~~s~v~~-- 239 (650)
.+-.... ...........+.+ ++.+++.|+.+ ..+..||+.+.+-. .+. . ......++.+
T Consensus 214 ~~~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d-----~~i~~wd~~~~~~~~~~~---~---~~~~v~~l~~sp 279 (357)
T 4g56_B 214 PKPATRI---DFCASDTIPTSVTWHPEKDDTFACGDET-----GNVSLVNIKNPDSAQTSA---V---HSQNITGLAYSY 279 (357)
T ss_dssp SSCBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESS-----SCEEEEESSCGGGCEEEC---C---CSSCEEEEEECS
T ss_pred Cceeeee---eeccccccccchhhhhcccceEEEeecc-----cceeEEECCCCcEeEEEe---c---cceeEEEEEEcC
Confidence 5433211 11111111122222 35677777755 36888998765421 111 1 1111222222
Q ss_pred CC-EEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE--CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 240 GT-KVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT--GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 240 ~~-~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~--~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
++ ++++.|+.+ ..+.+||+++.+..... + ....-.++++. ++.+++.||.+ ..+.++++.
T Consensus 280 ~~~~~lasgs~D-----~~i~iwd~~~~~~~~~~--~---H~~~V~~vafsP~d~~~l~s~s~D------g~v~iW~~~ 342 (357)
T 4g56_B 280 HSSPFLASISED-----CTVAVLDADFSEVFRDL--S---HRDFVTGVAWSPLDHSKFTTVGWD------HKVLHHHLP 342 (357)
T ss_dssp SSSCCEEEEETT-----SCEEEECTTSCEEEEEC--C---CSSCEEEEEECSSSTTEEEEEETT------SCEEEEECC
T ss_pred CCCCEEEEEeCC-----CEEEEEECCCCcEeEEC--C---CCCCEEEEEEeCCCCCEEEEEcCC------CeEEEEECC
Confidence 33 566666643 35888999877544321 1 11111233332 56788888753 245666664
No 99
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.12 E-value=0.79 Score=46.98 Aligned_cols=202 Identities=9% Similarity=-0.014 Sum_probs=99.5
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCC-cCcCeEEEEECCCCcEEeeecCCCCCCCC-c
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGY-KKVNDLHILDLESKEWMRPECRGAPPSPR-E 129 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~-~~~ndv~~yD~~t~~W~~l~~~~~~P~~R-~ 129 (650)
..++++|+.++....+... .....+..... +++.+++...... .....+|.+|..+..+..+.. ..+. .
T Consensus 168 ~~l~~~d~~~g~~~~~~~~----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~----~~~~~~ 239 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD----TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE----HAEGES 239 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC----CCTTEE
T ss_pred ceEEEEECCCCcEEeeccC----CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec----cCCCcc
Confidence 4789999998887766532 11222223333 3543333322111 123679999998887776521 1111 1
Q ss_pred ccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEEEEeccCC-------
Q 006334 130 SHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCG------- 201 (650)
Q Consensus 130 ~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~------- 201 (650)
........+++.+++...... .....++++|+.+.+...+. ..+. .. ....- +++++++.+...
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~--~~~~~l~~~d~~~g~~~~l~---~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~ 311 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKG--QTDRVIYKANPETLENEEVM---VMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADA 311 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETT--TCCEEEEEECTTTCCEEEEE---ECCS--EE-EEEECSSSSEEEEEECCC-------
T ss_pred ccceEECCCCCEEEEEecCCC--CccceEEEEECCCCCeEEee---eCCC--CC-CCccCCCCceEEEecCCcceeeccc
Confidence 222233345554444433211 11234999999888766544 2221 11 12222 566666654221
Q ss_pred ----CCccCeEEEEECCCCcEEEeeecCCCC-----C-c-ccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEE
Q 006334 202 ----DQYHGDIDMLDMNSLTWSRLAIIGSSP-----G-V-RAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 202 ----~~~~n~v~~yd~~t~~W~~i~~~g~~P-----~-~-R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~ 270 (650)
......++++|+.+.+...+....... . . .........+++.+++..... ....+|.+|+.+..++.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~--~~~~l~~~~~~~~~~~~ 389 (396)
T 3c5m_A 312 DSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE--GVPAIYIADVPESYKHL 389 (396)
T ss_dssp ---CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT--SSCEEEEEECCTTCC--
T ss_pred cccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC--CCceEEEEEEccccccc
Confidence 112367999999888776665321100 0 0 011112223444344433322 23579999999888776
Q ss_pred ee
Q 006334 271 LD 272 (650)
Q Consensus 271 l~ 272 (650)
+.
T Consensus 390 ~~ 391 (396)
T 3c5m_A 390 EH 391 (396)
T ss_dssp --
T ss_pred cc
Confidence 54
No 100
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.09 E-value=6.6 Score=40.99 Aligned_cols=207 Identities=12% Similarity=0.086 Sum_probs=91.3
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEE
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTA 133 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~ 133 (650)
.+.+||..+++-...... ......+...++.+++.|+.+ ..++.+|............+ ........
T Consensus 170 ~v~iWd~~~~~~~~~~~~-----h~~~v~~~s~~~~~l~sgs~d-----~~i~~~d~~~~~~~~~~~~~---h~~~~~~~ 236 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMTS-----HSARVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVATLSG---HSQEVCGL 236 (420)
T ss_dssp CEEEEETTTTEEEEEECC-----CSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEEEEEC---CSSCEEEE
T ss_pred eEEEEEcCCCcEEEEEeC-----CCCceEEEeeCCCEEEEEeCC-----CceeEeeecccceeeEEecc---cccceeee
Confidence 466667666543222111 111223334456667767653 35667776654332211111 01112222
Q ss_pred EEEcCCEEEEEccccCCCCcccceEEEEecCCCce--eeccccCCCCCCCCcceeee--ecCEEEEE-eccCCCCccCeE
Q 006334 134 TLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRW--ASPAVKGDIPVPRDSHSSNV--IANRLFVY-GGDCGDQYHGDI 208 (650)
Q Consensus 134 ~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~W--t~i~~~~~lP~~R~~hs~v~--~~~~Iyv~-GG~~~~~~~n~v 208 (650)
....++..++.|+.+ +.+.++|..+..- ..+......... -.+++. .+..+++. ||..+ ..+
T Consensus 237 ~~~~~g~~l~s~~~D-------~~v~i~~~~~~~~~~~~~~~~~~~~~~--V~~~~~~p~~~~~la~~~gs~D----~~I 303 (420)
T 4gga_A 237 RWAPDGRHLASGGND-------NLVNVWPSAPGEGGWVPLQTFTQHQGA--VKAVAWCPWQSNVLATGGGTSD----RHI 303 (420)
T ss_dssp EECTTSSEEEEEETT-------SCEEEEESSCCSSCSCCSEEECCCSSC--EEEEEECTTCTTEEEEEECTTT----CEE
T ss_pred eecCCCCeeeeeecc-------ccceEEeeccccccceeeeeecccCCc--eeeeeeCCCcccEEEEEeecCC----CEE
Confidence 333456667777653 2466777655431 111100000000 111111 13344444 44322 468
Q ss_pred EEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEE
Q 006334 209 DMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAA 286 (650)
Q Consensus 209 ~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsa 286 (650)
..||+.+..-...-.. . ....+++.. ++.+++.+|..+ ..|.+||+.+.+- +.... .-..+.. ++
T Consensus 304 ~iwd~~t~~~~~~~~~---~--~~v~~~~~~~~~~~lv~~sg~~d----~~I~iwd~~~~~~--v~~l~-gH~~~V~-~l 370 (420)
T 4gga_A 304 RIWNVCSGACLSAVDA---H--SQVCSILWSPHYKELISGHGFAQ----NQLVIWKYPTMAK--VAELK-GHTSRVL-SL 370 (420)
T ss_dssp EEEETTTTEEEEEEEC---S--SCEEEEEEETTTTEEEEEECTTT----CCEEEEETTTCCE--EEEEC-CCSSCEE-EE
T ss_pred EEEeCCccccceeecc---c--cceeeeeecCCCCeEEEEEecCC----CEEEEEECCCCcE--EEEEc-CCCCCEE-EE
Confidence 8899988765443311 1 111222222 346666656543 3588999876643 22210 1112222 22
Q ss_pred EEE-CCeEEEEcCC
Q 006334 287 VVT-GSDIVIYGGC 299 (650)
Q Consensus 287 v~~-~~~lyV~GG~ 299 (650)
++. ++.+++.||.
T Consensus 371 ~~spdg~~l~S~s~ 384 (420)
T 4gga_A 371 TMSPDGATVASAAA 384 (420)
T ss_dssp EECTTSSCEEEEET
T ss_pred EEcCCCCEEEEEec
Confidence 222 5677777774
No 101
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.09 E-value=2 Score=47.87 Aligned_cols=198 Identities=12% Similarity=-0.001 Sum_probs=108.8
Q ss_pred cceEEEEECCC------CcEEEee-cCCCCCCCCcceEEEEECCEEEEEcccCCCc---CcCeEEEEECC-CC---cEEe
Q 006334 52 FGDVLMLNLDT------MVWSTLA-TTGQGPGPRDSHSAILWGHKMIVFGGTNGYK---KVNDLHILDLE-SK---EWMR 117 (650)
Q Consensus 52 ~~dv~~yD~~t------~sW~~l~-~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~---~~ndv~~yD~~-t~---~W~~ 117 (650)
..++|++|..+ .....+. .. + .........-+++.+++...+... ...++|++|+. +. ....
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~---~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDA---H-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSC---S-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecC---C-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 46899999988 6666554 21 1 112222233366655555543321 13689999998 56 3444
Q ss_pred eecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccC-CCCCCCC---cceeeee-cCE
Q 006334 118 PECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKG-DIPVPRD---SHSSNVI-ANR 192 (650)
Q Consensus 118 l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~-~lP~~R~---~hs~v~~-~~~ 192 (650)
+... ............++++|+.+..+ . ...+|++|+.+.+|..+.... ..-.+.. ...++.. +++
T Consensus 236 l~~~----~~~~~~~~~~spdg~l~~~~~~~---~--~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~ 306 (662)
T 3azo_A 236 LLGG----PEEAIAQAEWAPDGSLIVATDRT---G--WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL 306 (662)
T ss_dssp EEEE----TTBCEEEEEECTTSCEEEEECTT---S--SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC
T ss_pred eCCC----CCceEcceEECCCCeEEEEECCC---C--CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE
Confidence 3111 01112233334467777766542 1 247999999888888764211 1101111 1122332 566
Q ss_pred EEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEE-EEECCEEEEEeccCCCcccCeEEEEECCCCcEEEe
Q 006334 193 LFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAA-INIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQL 271 (650)
Q Consensus 193 Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~-v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l 271 (650)
+++.+.. -...+|.+|+.+.....+.. +.. ....+ ...++.+++..+.. ....++|.+|+.+.+...+
T Consensus 307 ~~~~~~~----~~~~l~~~d~~~~~~~~l~~----~~~-~~~~~~s~~~~~~~~~~~~~--~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 307 IAVVHGK----GAAVLGILDPESGELVDAAG----PWT-EWAATLTVSGTRAVGVAASP--RTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp EEEEEBS----SSCEEEEEETTTTEEEECCS----SCC-EEEEEEEEETTEEEEEEEET--TEEEEEEEEETTTCCEEEE
T ss_pred EEEEEEc----CccEEEEEECCCCcEEEecC----CCC-eEEEEEecCCCEEEEEEcCC--CCCCEEEEEECCCCceEEe
Confidence 7666553 24578999998888776642 111 11222 33456666654432 2345799999999998887
Q ss_pred ec
Q 006334 272 DT 273 (650)
Q Consensus 272 ~~ 273 (650)
..
T Consensus 376 ~~ 377 (662)
T 3azo_A 376 GA 377 (662)
T ss_dssp ES
T ss_pred ec
Confidence 54
No 102
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.04 E-value=1.7 Score=44.55 Aligned_cols=202 Identities=10% Similarity=0.077 Sum_probs=95.5
Q ss_pred EEEEEccCCCCcccceEEEEECCCCc------EEEeecCCCCCC-CCcceEEEEE-----CCEE-EEEcccCCCcCcCeE
Q 006334 39 AVYIFGGCCGGLHFGDVLMLNLDTMV------WSTLATTGQGPG-PRDSHSAILW-----GHKM-IVFGGTNGYKKVNDL 105 (650)
Q Consensus 39 ~IyvfGG~~~~~~~~dv~~yD~~t~s------W~~l~~~g~~P~-pR~~hsa~~~-----~~~l-yVfGG~~~~~~~ndv 105 (650)
.+++.|+.+ ..+.+||..+.. +..+..... .. ...-.++.+. ++.. ++.|+.++ .+
T Consensus 82 ~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-----~i 150 (397)
T 1sq9_A 82 CLVATTSFS-----GDLLFYRITREDETKKVIFEKLDLLDS-DMKKHSFWALKWGASNDRLLSHRLVATDVKG-----TT 150 (397)
T ss_dssp EEEEEEETT-----SCEEEEEEEECTTTCCEEEEEECCSCT-TGGGSCEEEEEEECCC----CEEEEEEETTS-----CE
T ss_pred cEEEEEcCC-----CCEEEEEccCCcccccccceeeccccc-ccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----cE
Confidence 777777754 357888877665 665543310 00 0112233333 4556 77777643 46
Q ss_pred EEEECCC------Cc---EE---eeec--CCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeec
Q 006334 106 HILDLES------KE---WM---RPEC--RGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASP 171 (650)
Q Consensus 106 ~~yD~~t------~~---W~---~l~~--~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i 171 (650)
..||+.+ .. |. .+.. .........-.++....++ +++.|+.+ ..+.+||+.+.+....
T Consensus 151 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-------g~i~i~d~~~~~~~~~ 222 (397)
T 1sq9_A 151 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-------GTVQISELSTLRPLYN 222 (397)
T ss_dssp EEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-------SEEEEEETTTTEEEEE
T ss_pred EEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-------CcEEEEECCCCceeEE
Confidence 6777665 21 21 1100 0001112223344445566 77777653 3588999887654321
Q ss_pred cccCCCCCC---CCcceeeee--cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCC--------cccceEEEE
Q 006334 172 AVKGDIPVP---RDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPG--------VRAGHAAIN 238 (650)
Q Consensus 172 ~~~~~lP~~---R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~--------~R~~~s~v~ 238 (650)
- . ..... ...-..+.+ ++.+++.|+.++ ....+.+||+.+.+-...-.....+. .......+.
T Consensus 223 ~-~-~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 223 F-E-SQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp E-E-CCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEE
T ss_pred E-e-ccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEE
Confidence 1 0 10000 111122222 466677776431 11478899987765332210000000 111222222
Q ss_pred E--CCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 239 I--GTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 239 ~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 299 ~~~~~~~l~~~~~d-----g~i~iwd~~~~~~ 325 (397)
T 1sq9_A 299 FNDSGETLCSAGWD-----GKLRFWDVKTKER 325 (397)
T ss_dssp ECSSSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred ECCCCCEEEEEeCC-----CeEEEEEcCCCce
Confidence 2 45677776643 3689999987754
No 103
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=93.95 E-value=1.5 Score=49.73 Aligned_cols=214 Identities=9% Similarity=0.014 Sum_probs=114.5
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCC--------cCcCeEEEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGY--------KKVNDLHIL 108 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~--------~~~ndv~~y 108 (650)
+++.++|.-........+++++|+.++........ +.......+..-+++.++++..+.. ....++|++
T Consensus 131 DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~---~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~ 207 (695)
T 2bkl_A 131 DGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI---EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYH 207 (695)
T ss_dssp TSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB---SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEE
T ss_pred CCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc---CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEE
Confidence 45555554433333345899999998875311111 1112222233346777777766443 235679999
Q ss_pred ECCCCcE--EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCccee
Q 006334 109 DLESKEW--MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSS 186 (650)
Q Consensus 109 D~~t~~W--~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~ 186 (650)
++.+..- ..+ ......+..........+++.+++...... ..+++|.+|..+..|..+.... . .....
T Consensus 208 ~l~t~~~~~~lv--~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~---~~~~l~~~~~~~~~~~~l~~~~----~-~~~~~ 277 (695)
T 2bkl_A 208 TLGTEPSKDTVV--HERTGDPTTFLQSDLSRDGKYLFVYILRGW---SENDVYWKRPGEKDFRLLVKGV----G-AKYEV 277 (695)
T ss_dssp ETTSCGGGCEEE--ECCCCCTTCEEEEEECTTSCCEEEEEEETT---TEEEEEEECTTCSSCEEEEECS----S-CCEEE
T ss_pred ECCCCchhceEE--EecCCCCEEEEEEEECCCCCEEEEEEeCCC---CceEEEEEcCCCCceEEeecCC----C-ceEEE
Confidence 9988753 222 111112233344444556666666554221 3467888887777787665211 1 11222
Q ss_pred eeecCEEEEEeccCCCCccCeEEEEECCCCc---EEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEEC
Q 006334 187 NVIANRLFVYGGDCGDQYHGDIDMLDMNSLT---WSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNV 263 (650)
Q Consensus 187 v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~---W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~ 263 (650)
+..++.+|+....+ .....++++|+.+.. |..+... .+. ..-..+...++++++....+. ...+|.+++
T Consensus 278 ~~~~g~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~--~~~-~~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~ 349 (695)
T 2bkl_A 278 HAWKDRFYVLTDEG--APRQRVFEVDPAKPARASWKEIVPE--DSS-ASLLSVSIVGGHLSLEYLKDA---TSEVRVATL 349 (695)
T ss_dssp EEETTEEEEEECTT--CTTCEEEEEBTTBCSGGGCEEEECC--CSS-CEEEEEEEETTEEEEEEEETT---EEEEEEEET
T ss_pred EecCCcEEEEECCC--CCCCEEEEEeCCCCCccCCeEEecC--CCC-CeEEEEEEECCEEEEEEEECC---EEEEEEEeC
Confidence 33455566654322 234689999987754 8877621 111 112223344788877765432 357899998
Q ss_pred CCCcEEEe
Q 006334 264 STCSWSQL 271 (650)
Q Consensus 264 ~t~~W~~l 271 (650)
....-..+
T Consensus 350 ~g~~~~~l 357 (695)
T 2bkl_A 350 KGKPVRTV 357 (695)
T ss_dssp TCCEEEEC
T ss_pred CCCeeEEe
Confidence 65544444
No 104
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.87 E-value=6.9 Score=44.45 Aligned_cols=193 Identities=12% Similarity=0.051 Sum_probs=96.5
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCC-c
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESK-E 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~-~ 114 (650)
++..++.|+.+ ..+.+||..++........ . ...-.++++. ++..++.|+.+ ..+.+||..++ .
T Consensus 66 ~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~-~---~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~ 131 (814)
T 3mkq_A 66 RKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEA-H---PDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWA 131 (814)
T ss_dssp GGTEEEEEETT-----SEEEEEETTTCCEEEEEEC-C---SSCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGTSE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEec-C---CCCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCce
Confidence 34555555542 4688999988776543221 1 1111223332 56566666643 35788888765 3
Q ss_pred EEeeecCCCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee---c
Q 006334 115 WMRPECRGAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI---A 190 (650)
Q Consensus 115 W~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~---~ 190 (650)
....- .+ ....-.++.... ++.+++.|+.+ ..+.+||+.+..-.... ..........+... +
T Consensus 132 ~~~~~-~~---~~~~v~~~~~~p~~~~~l~~~~~d-------g~v~vwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~~ 197 (814)
T 3mkq_A 132 LEQTF-EG---HEHFVMCVAFNPKDPSTFASGCLD-------RTVKVWSLGQSTPNFTL---TTGQERGVNYVDYYPLPD 197 (814)
T ss_dssp EEEEE-EC---CSSCEEEEEEETTEEEEEEEEETT-------SEEEEEETTCSSCSEEE---ECCCTTCCCEEEECCSTT
T ss_pred EEEEE-cC---CCCcEEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCcceeEE---ecCCCCCEEEEEEEECCC
Confidence 32221 11 111122333333 46677777763 35888888654332211 01111112222222 5
Q ss_pred CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEE
Q 006334 191 NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 191 ~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~ 270 (650)
+.+++.|+.+ ..+..||..+.+-...-. . ........+...++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 198 ~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~l~~~~~d-----g~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 198 KPYMITASDD-----LTIKIWDYQTKSCVATLE--G-HMSNVSFAVFHPTLPIIISGSED-----GTLKIWNSSTYKVEK 264 (814)
T ss_dssp CCEEEEECTT-----SEEEEEETTTTEEEEEEE--C-CSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCSEEE
T ss_pred CCEEEEEeCC-----CEEEEEECCCCcEEEEEc--C-CCCCEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 6677777754 478899988765332211 1 11111111122245677777654 358888988765433
No 105
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.87 E-value=4.5 Score=39.88 Aligned_cols=146 Identities=14% Similarity=0.183 Sum_probs=72.8
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCC-cceEEEE-ECC-EEEEEcccCCCcCcCeEEEEECCCCcEEe-eecCCCCC-CC
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPR-DSHSAIL-WGH-KMIVFGGTNGYKKVNDLHILDLESKEWMR-PECRGAPP-SP 127 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR-~~hsa~~-~~~-~lyVfGG~~~~~~~ndv~~yD~~t~~W~~-l~~~~~~P-~~ 127 (650)
+.++++|..+.+.......+. .. .-+.+++ .++ .+|+.+.. ...++++|+.+.+-.. +... ... ..
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~-~~~~~~ 81 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIAD---AGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLS-TPEERV 81 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTT---CTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECC-BTTEEE
T ss_pred CeEEEEECCCCcEEEEEEcCC---CCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcC-Cccccc
Confidence 479999998876544333211 10 1123333 344 67776542 2579999998876543 2111 100 00
Q ss_pred CcccEEEEEcCC-EEEEEccccC-CCCc---ccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cC-EEEEEeccC
Q 006334 128 RESHTATLVGDD-KMVIFGGSGE-GEAN---YLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-AN-RLFVYGGDC 200 (650)
Q Consensus 128 R~~hs~~~~~~~-~Lyv~GG~~~-~~~~---~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~-~Iyv~GG~~ 200 (650)
..-..+.+..++ .||+...... .... .-+.+++||+.+.+....-.. ...-+.++.. ++ .||+.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~--- 153 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-----PRQITMLAWARDGSKLYGLG--- 153 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-----CSSCCCEEECTTSSCEEEES---
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-----CCCcceeEECCCCCEEEEeC---
Confidence 012234444455 5666531100 0001 126799999987765432211 1111223322 33 466652
Q ss_pred CCCccCeEEEEECCCCcEEE
Q 006334 201 GDQYHGDIDMLDMNSLTWSR 220 (650)
Q Consensus 201 ~~~~~n~v~~yd~~t~~W~~ 220 (650)
+.+++||+.+.+-..
T Consensus 154 -----~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 154 -----RDLHVMDPEAGTLVE 168 (337)
T ss_dssp -----SSEEEEETTTTEEEE
T ss_pred -----CeEEEEECCCCcEee
Confidence 479999998876543
No 106
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=93.86 E-value=5.1 Score=38.89 Aligned_cols=190 Identities=10% Similarity=0.006 Sum_probs=101.6
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.||+.... .+.+++||+. +++....... ....-+.+++. ++++|+.... .+.+++||+. .+.
T Consensus 72 ~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 72 LGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTI 136 (300)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECSS---TTCCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCE
T ss_pred CCCEEEEecC-----CCeEEEECCC-CCeEEecCCC---CCCCCccceECCCCCEEEEccC-----CCeEEEECCC-CCE
Confidence 3677775431 2468999988 6776554321 11223344443 5788886432 2468999987 665
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRL 193 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~I 193 (650)
....... ....-..++...+++||+.... ...+++||+ +.++..+.. +........+.+ ++.+
T Consensus 137 ~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~-------~~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~d~~g~l 201 (300)
T 2qc5_A 137 YEYDLPN---KGSYPAFITLGSDNALWFTENQ-------NNSIGRITN-TGKLEEYPL----PTNAAAPVGITSGNDGAL 201 (300)
T ss_dssp EEEECSS---TTCCEEEEEECTTSSEEEEETT-------TTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECTTSSE
T ss_pred EEccCCC---CCCCceeEEECCCCCEEEEecC-------CCeEEEECC-CCcEEEeeC----CCCCCCcceEEECCCCCE
Confidence 5442111 1122234444456778875422 135889998 666655331 111111222222 4678
Q ss_pred EEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccc-eEEEEE-CCEEEEEeccCCCcccCeEEEEECCCCcEEEe
Q 006334 194 FVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAG-HAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQL 271 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~-~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l 271 (650)
|+.... .+.+++||+ +..+..... +..... .+++.. +++||+.... .+.+.+||+ +.+...+
T Consensus 202 ~v~~~~-----~~~i~~~~~-~g~~~~~~~----~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 202 WFVEIM-----GNKIGRITT-TGEISEYDI----PTPNARPHAITAGKNSEIWFTEWG-----ANQIGRITN-DNTIQEY 265 (300)
T ss_dssp EEEETT-----TTEEEEECT-TCCEEEEEC----SSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECT-TSCEEEE
T ss_pred EEEccC-----CCEEEEEcC-CCcEEEEEC----CCCCCCceEEEECCCCCEEEeccC-----CCeEEEECC-CCcEEEE
Confidence 876432 246899998 666666542 111122 233332 4578887421 357899998 4666655
Q ss_pred e
Q 006334 272 D 272 (650)
Q Consensus 272 ~ 272 (650)
.
T Consensus 266 ~ 266 (300)
T 2qc5_A 266 Q 266 (300)
T ss_dssp E
T ss_pred E
Confidence 4
No 107
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=93.85 E-value=3.4 Score=39.88 Aligned_cols=154 Identities=14% Similarity=0.075 Sum_probs=85.9
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecC---CCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEE
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATT---GQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLH 106 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~---g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~ 106 (650)
+++..++.+|+|=| +.+|+++.....+...... ...|. ... ++... ++++|+|=| +.+|
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEcc-------CEEE
Confidence 45567899999988 3688888665444332221 12232 122 22222 589999987 5788
Q ss_pred EEECCCCc---EEeeecCCCCCC-CCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceee-----cc-ccC
Q 006334 107 ILDLESKE---WMRPECRGAPPS-PRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-----PA-VKG 175 (650)
Q Consensus 107 ~yD~~t~~---W~~l~~~~~~P~-~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-----i~-~~~ 175 (650)
+|+-.+-. =+.+...+ .|. ...--++.... ++++|+|-|. ..|+||..+++-.. +. .-.
T Consensus 92 ~~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~gk~yfFkG~---------~ywr~d~~~~~~d~gyPr~i~~~~~ 161 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELG-LPKEVKKISAAVHFEDTGKTLLFSGN---------QVWRYDDTNHIMDKDYPRLIEEDFP 161 (207)
T ss_dssp EESTTCCCTTCSEESTTTT-CCTTCCCCCEEEECTTTSEEEEEETT---------EEEEEETTTTEECSSCCCBHHHHST
T ss_pred EEeCCeeccCCceeccccC-CCCCCccccEEEEeCCCCEEEEEeCC---------EEEEEeCcCccccCCCCccHHHcCC
Confidence 88643211 12221111 221 11223333333 4899999774 48999986543221 00 001
Q ss_pred CCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEE
Q 006334 176 DIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR 220 (650)
Q Consensus 176 ~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~ 220 (650)
.+| ..-.++...++++|+|-| +..|+||..+.+-..
T Consensus 162 Gip--~~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 162 GIG--DKVDAVYEKNGYIYFFNG-------PIQFEYSIWSNRIVR 197 (207)
T ss_dssp TSC--SCCSEEEEETTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCC--CCccEEEEcCCcEEEEEC-------CEEEEEeCCccEEec
Confidence 233 223344456899999988 689999988776544
No 108
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.81 E-value=6.6 Score=39.99 Aligned_cols=227 Identities=11% Similarity=0.019 Sum_probs=108.4
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.+++.|+.+ ..+.+||........+... ...-.++.+. +++.++.|+.+ ..+..||+.+.+.
T Consensus 119 ~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 119 DGNSIVTGVEN-----GELRLWNKTGALLNVLNFH-----RAPIVSVKWNKDGTHIISMDVE-----NVTILWNVISGTV 183 (425)
T ss_dssp TSSEEEEEETT-----SCEEEEETTSCEEEEECCC-----CSCEEEEEECTTSSEEEEEETT-----CCEEEEETTTTEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeeccCC-----CccEEEEEECCCCCEEEEEecC-----CeEEEEECCCCcE
Confidence 45666677653 3588888544433333221 1112233332 56666667653 3578888887764
Q ss_pred EeeecCCCCC-----------CCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcc
Q 006334 116 MRPECRGAPP-----------SPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSH 184 (650)
Q Consensus 116 ~~l~~~~~~P-----------~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~h 184 (650)
...-.....+ .......+....++. +++|+.+ ..+.+||+.+..-...- ... ...-.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------g~i~~~d~~~~~~~~~~---~~~-~~~i~ 251 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK-------GAIFVYQITEKTPTGKL---IGH-HGPIS 251 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETTE-EEEECGG-------GCEEEEETTCSSCSEEE---CCC-SSCEE
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC-------CeEEEEEcCCCceeeee---ccC-CCceE
Confidence 4321110100 000022333343444 5666653 35889998775332211 000 11112
Q ss_pred eeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEE
Q 006334 185 SSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILN 262 (650)
Q Consensus 185 s~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD 262 (650)
++... ++.+++.|+.+ ..+.+||+.+.+....- .. ....-.+++.. ++ +++.|+.+ ..+.+||
T Consensus 252 ~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~---~~-~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d 316 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASDD-----GTLRIWHGGNGNSQNCF---YG-HSQSIVSASWVGDD-KVISCSMD-----GSVRLWS 316 (425)
T ss_dssp EEEEETTTTEEEEEETT-----SCEEEECSSSBSCSEEE---CC-CSSCEEEEEEETTT-EEEEEETT-----SEEEEEE
T ss_pred EEEECCCCCEEEEEcCC-----CEEEEEECCCCccceEe---cC-CCccEEEEEECCCC-EEEEEeCC-----CcEEEEE
Confidence 22222 45566676644 36888887765432221 01 11122233333 44 66666543 3789999
Q ss_pred CCCCcEEEeecCCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 263 VSTCSWSQLDTCGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 263 ~~t~~W~~l~~~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
+.+.+-...-.. .. ..-.++.+. ++.+++.|+.+ ..+.++++.
T Consensus 317 ~~~~~~~~~~~~---~~-~~i~~~~~s~~~~~l~~~~~d------g~i~i~~~~ 360 (425)
T 1r5m_A 317 LKQNTLLALSIV---DG-VPIFAGRISQDGQKYAVAFMD------GQVNVYDLK 360 (425)
T ss_dssp TTTTEEEEEEEC---TT-CCEEEEEECTTSSEEEEEETT------SCEEEEECH
T ss_pred CCCCcEeEeccc---CC-ccEEEEEEcCCCCEEEEEECC------CeEEEEECC
Confidence 987764433211 11 111222333 46677777642 356667664
No 109
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.76 E-value=5.2 Score=39.87 Aligned_cols=205 Identities=9% Similarity=-0.020 Sum_probs=100.8
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
+.||+.+-. .+.+++||+. .....+... . ..-.+++.. +++||+.... ...+++||+. .+.+
T Consensus 57 ~~l~~~d~~-----~~~i~~~~~~-g~~~~~~~~----~-~~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 57 RTLVWSDLV-----GRRVLGWRED-GTVDVLLDA----T-AFTNGNAVDAQQRLVHCEHG-----RRAITRSDAD-GQAH 119 (305)
T ss_dssp TEEEEEETT-----TTEEEEEETT-SCEEEEEES----C-SCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEE
T ss_pred CEEEEEECC-----CCEEEEEeCC-CCEEEEeCC----C-CccceeeECCCCCEEEEECC-----CCEEEEECCC-CCEE
Confidence 457666543 2468899984 555544332 1 112333333 5788875321 1468889886 5565
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEE----ccccC------CCCcccceEEEEecCCCceeeccccCCCCCCCCccee
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIF----GGSGE------GEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSS 186 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~----GG~~~------~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~ 186 (650)
.+........-..-..+++..++.||+. |-..+ ........+++||+.+.+++.+. .+.. -..+
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~~---p~gl 193 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLDH---PNGL 193 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EESS---EEEE
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCCC---Ccce
Confidence 5421111000011233455557888885 43210 00111357999999888777543 1111 1222
Q ss_pred eee-c-CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECC
Q 006334 187 NVI-A-NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVS 264 (650)
Q Consensus 187 v~~-~-~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~ 264 (650)
+.. + ..||+..........+.+++||+..............+.......++-.++.||+..+ +.|++||++
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~-------~gv~~~~~~ 266 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG-------TGVCVFDSD 266 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS-------SEEEEECTT
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC-------CcEEEECCC
Confidence 322 3 3577764321111135799999876543222211111111111122223457777641 359999997
Q ss_pred CCcEEEee
Q 006334 265 TCSWSQLD 272 (650)
Q Consensus 265 t~~W~~l~ 272 (650)
......+.
T Consensus 267 g~~~~~~~ 274 (305)
T 3dr2_A 267 GQLLGHIP 274 (305)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 77666665
No 110
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=93.75 E-value=7.1 Score=40.15 Aligned_cols=230 Identities=8% Similarity=0.047 Sum_probs=113.2
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.+++.|+.+ ..+.+||..+..-...... ....-.++++. ++++++.|+.++ .+.+||+.+.+-
T Consensus 108 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~~~~ 173 (420)
T 3vl1_A 108 QMRRFILGTTE-----GDIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISSSQDM-----QLKIWSVKDGSN 173 (420)
T ss_dssp SSCEEEEEETT-----SCEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCC
T ss_pred CCCEEEEEECC-----CCEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEEeCCC-----eEEEEeCCCCcC
Confidence 45566666643 3578888876654333111 11122233333 566777777543 688899876542
Q ss_pred Ee-eecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCC-CCC------------
Q 006334 116 MR-PECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIP-VPR------------ 181 (650)
Q Consensus 116 ~~-l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP-~~R------------ 181 (650)
.. +. .....-.++....++.+++.|+.+ ..+.+||+.+.+-...-.....+ ...
T Consensus 174 ~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 241 (420)
T 3vl1_A 174 PRTLI-----GHRATVTDIAIIDRGRNVLSASLD-------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ 241 (420)
T ss_dssp CEEEE-----CCSSCEEEEEEETTTTEEEEEETT-------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS
T ss_pred ceEEc-----CCCCcEEEEEEcCCCCEEEEEcCC-------CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce
Confidence 21 11 011122344445567777777763 24778888765432211000000 000
Q ss_pred ------C-cceee-eecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCE-EEEEeccCC
Q 006334 182 ------D-SHSSN-VIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTK-VYIIGGVGD 251 (650)
Q Consensus 182 ------~-~hs~v-~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~-IyI~GG~~~ 251 (650)
. ..++. .-++.+++.|+.+ ..+..||+.+..-.... .......-.+++.. ++. +++.|+.+
T Consensus 242 ~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~g~~d- 312 (420)
T 3vl1_A 242 LHEISTSKKNNLEFGTYGKYVIAGHVS-----GVITVHNVFSKEQTIQL---PSKFTCSCNSLTVDGNNANYIYAGYEN- 312 (420)
T ss_dssp CGGGCCCCCCTTCSSCTTEEEEEEETT-----SCEEEEETTTCCEEEEE---CCTTSSCEEEEEECSSCTTEEEEEETT-
T ss_pred eeecccCcccceEEcCCCCEEEEEcCC-----CeEEEEECCCCceeEEc---ccccCCCceeEEEeCCCCCEEEEEeCC-
Confidence 0 00011 1246677777754 36899998876533322 11111112222222 334 77777653
Q ss_pred CcccCeEEEEECCCCc--EEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 252 KHYYNDIWILNVSTCS--WSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 252 ~~~~~dv~~yD~~t~~--W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
..+.+||+.+.. -..+... ....-.++...++.+++.|+.+ ..+.++++.
T Consensus 313 ----g~i~vwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~l~s~~~d------~~v~iw~~~ 364 (420)
T 3vl1_A 313 ----GMLAQWDLRSPECPVGEFLIN----EGTPINNVYFAAGALFVSSGFD------TSIKLDIIS 364 (420)
T ss_dssp ----SEEEEEETTCTTSCSEEEEES----TTSCEEEEEEETTEEEEEETTT------EEEEEEEEC
T ss_pred ----CeEEEEEcCCCcCchhhhhcc----CCCCceEEEeCCCCEEEEecCC------ccEEEEecc
Confidence 368999998753 2222210 1111223344477788887742 345666654
No 111
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.74 E-value=2.7 Score=43.67 Aligned_cols=151 Identities=11% Similarity=0.099 Sum_probs=76.7
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEc-CCEEEEEcc-ccCCCCcccceEEEEecC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVG-DDKMVIFGG-SGEGEANYLNDLHVLDLK 164 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG-~~~~~~~~~~dv~~yd~~ 164 (650)
++.+++.|+.++ .+.+||+.+..-...- . .....-.++.... +..+++.|| ..+ ..+.+||+.
T Consensus 228 ~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~-~---~~~~~v~~~~~~p~~~~ll~~~~gs~d------~~i~i~d~~ 292 (401)
T 4aez_A 228 DGLQLASGGNDN-----VVQIWDARSSIPKFTK-T---NHNAAVKAVAWCPWQSNLLATGGGTMD------KQIHFWNAA 292 (401)
T ss_dssp TSSEEEEEETTS-----CEEEEETTCSSEEEEE-C---CCSSCCCEEEECTTSTTEEEEECCTTT------CEEEEEETT
T ss_pred CCCEEEEEeCCC-----eEEEccCCCCCccEEe-c---CCcceEEEEEECCCCCCEEEEecCCCC------CEEEEEECC
Confidence 567777777643 6888999876543321 0 1112223334333 345777664 211 358889987
Q ss_pred CCceeeccccCCCCCCCCcceeeee-c-CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCE
Q 006334 165 TMRWASPAVKGDIPVPRDSHSSNVI-A-NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTK 242 (650)
Q Consensus 165 t~~Wt~i~~~~~lP~~R~~hs~v~~-~-~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~ 242 (650)
+.+....- .. ...-.++... + ..+++.+|..+ +.+.+||..+.....+..... ...+........+++
T Consensus 293 ~~~~~~~~---~~--~~~v~~~~~s~~~~~l~~~~g~~d----g~i~v~~~~~~~~~~~~~~~~-h~~~v~~~~~s~dg~ 362 (401)
T 4aez_A 293 TGARVNTV---DA--GSQVTSLIWSPHSKEIMSTHGFPD----NNLSIWSYSSSGLTKQVDIPA-HDTRVLYSALSPDGR 362 (401)
T ss_dssp TCCEEEEE---EC--SSCEEEEEECSSSSEEEEEECTTT----CEEEEEEEETTEEEEEEEEEC-CSSCCCEEEECTTSS
T ss_pred CCCEEEEE---eC--CCcEEEEEECCCCCeEEEEeecCC----CcEEEEecCCccceeEEEecC-CCCCEEEEEECCCCC
Confidence 76543311 11 1111122222 2 34555545333 478889988877666542111 111222222233566
Q ss_pred EEEEeccCCCcccCeEEEEECCCCc
Q 006334 243 VYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 243 IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
+++.||.+ ..+.+||+.+.+
T Consensus 363 ~l~s~~~d-----g~i~iw~~~~~~ 382 (401)
T 4aez_A 363 ILSTAASD-----ENLKFWRVYDGD 382 (401)
T ss_dssp EEEEECTT-----SEEEEEECCC--
T ss_pred EEEEEeCC-----CcEEEEECCCCc
Confidence 77777653 368888887764
No 112
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.69 E-value=2.9 Score=47.93 Aligned_cols=210 Identities=9% Similarity=0.106 Sum_probs=106.5
Q ss_pred eEEEEECCCCcEEEeecCCCCC--CCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCC------CcEE---eeecC
Q 006334 54 DVLMLNLDTMVWSTLATTGQGP--GPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLES------KEWM---RPECR 121 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P--~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t------~~W~---~l~~~ 121 (650)
-+++||+.++++.......... ....-.++... ++.|+| |... ..+++||..+ ..+. .....
T Consensus 393 GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (758)
T 3ott_A 393 SINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCL-----GGIFVVDKHKLMQSTSGQYIAEQNYSVH 466 (758)
T ss_dssp EEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE-EESS-----SCEEEEEHHHHHHCCSSEEECSEEECGG
T ss_pred cHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECC-----CceEEEccccccccCCcceecccccccc
Confidence 4888999988887764321100 01111222222 478887 3221 2478888653 2232 11111
Q ss_pred CCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEEEEeccC
Q 006334 122 GAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDC 200 (650)
Q Consensus 122 ~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~ 200 (650)
..++. ..-.++....++.|+++||.. +-+++||+.+++++.+.. ..+.....-.++... ++.|++...
T Consensus 467 ~~l~~-~~i~~i~~d~~g~lWi~~~t~-------~Gl~~~d~~~~~~~~~~~-~~~~~~~~~~~i~~d~~g~lWigt~-- 535 (758)
T 3ott_A 467 NGLSG-MFINQIIPDNEGNVWVLLYNN-------KGIDKINPRTREVTKLFA-DELTGEKSPNYLLCDEDGLLWVGFH-- 535 (758)
T ss_dssp GTCSC-SCEEEEEECTTSCEEEEETTC-------SSEEEEETTTTEEEEECT-TTSCGGGCEEEEEECTTSCEEEEET--
T ss_pred ccccc-ceeeeEEEcCCCCEEEEccCC-------CCcEEEeCCCCceEEecC-CCcCCCcccceEEECCCCCEEEEec--
Confidence 11111 122334444467899876653 238899999998887531 111111111122221 467876432
Q ss_pred CCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCC
Q 006334 201 GDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQG 280 (650)
Q Consensus 201 ~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~ 280 (650)
+.+.+||+.+.++..+.. ..+|. ..-.+++..++.|++... .-+.+||+++.+..... ++..
T Consensus 536 -----~Gl~~~~~~~~~~~~~~~-~gl~~-~~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~----~~~~ 597 (758)
T 3ott_A 536 -----GGVMRINPKDESQQSISF-GSFSN-NEILSMTCVKNSIWVSTT-------NGLWIIDRKTMDARQQN----MTNK 597 (758)
T ss_dssp -----TEEEEECC--CCCCBCCC-CC----CCEEEEEEETTEEEEEES-------SCEEEEETTTCCEEEC------CCC
T ss_pred -----CceEEEecCCCceEEecc-cCCCc-cceEEEEECCCCEEEECC-------CCeEEEcCCCceeEEec----CCCC
Confidence 368999998887766531 12332 223334445678887642 45899999998877653 2223
Q ss_pred cceeEEEEE-CCeEEEEcCC
Q 006334 281 RFSHAAVVT-GSDIVIYGGC 299 (650)
Q Consensus 281 R~~hsav~~-~~~lyV~GG~ 299 (650)
.+. .++.. .+.-+.|||.
T Consensus 598 ~~~-~~~~~~~~G~l~fG~~ 616 (758)
T 3ott_A 598 RFT-SLLFDPKEDCVYLGGA 616 (758)
T ss_dssp CCS-EEEEETTTTEEEEECB
T ss_pred cee-eeEEECCCCcEEEecC
Confidence 333 33333 3455667764
No 113
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.63 E-value=2.4 Score=43.45 Aligned_cols=188 Identities=10% Similarity=0.018 Sum_probs=100.1
Q ss_pred EEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 39 AVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 39 ~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
.+++.|+.+ ..+.+||..+........... ....-.++.+. ++.+++.|+.+ ..+..+|+.+....
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~ 154 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMG--PGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQ 154 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCS--TTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCC--cCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceE
Confidence 577777753 368899998877665433200 11222233343 34677777654 36788899877665
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCE-EE
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANR-LF 194 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~-Iy 194 (650)
.+... ......-.++....++.+++.|+.+ ..+.+||+.......+. .. ...-.++... ++. ++
T Consensus 155 ~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~---~h--~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 155 VFAKT--DSWDYWYCCVDVSVSRQMLATGDST-------GRLLLLGLDGHEIFKEK---LH--KAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEECC--CCSSCCEEEEEEETTTTEEEEEETT-------SEEEEEETTSCEEEEEE---CS--SSCEEEEEECSSCTTEE
T ss_pred EEecc--CCCCCCeEEEEECCCCCEEEEECCC-------CCEEEEECCCCEEEEec---cC--CCcEEEEEECCCCCCEE
Confidence 54221 1111223344455567777877763 36888898544333222 10 1111122222 244 77
Q ss_pred EEeccCCCCccCeEEEEECCC----CcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 195 VYGGDCGDQYHGDIDMLDMNS----LTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 195 v~GG~~~~~~~n~v~~yd~~t----~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
+.|+.+ ..+..||+.+ ........ ....-.+++.. ++++++.|+.+ ..+.+||+.+..
T Consensus 221 ~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~~l~~~~~d-----~~i~iwd~~~~~ 284 (383)
T 3ei3_B 221 ATSSVD-----ATVKLWDLRNIKDKNSYIAEMP-----HEKPVNAAYFNPTDSTKLLTTDQR-----NEIRVYSSYDWS 284 (383)
T ss_dssp EEEETT-----SEEEEEEGGGCCSTTCEEEEEE-----CSSCEEEEEECTTTSCEEEEEESS-----SEEEEEETTBTT
T ss_pred EEEeCC-----CEEEEEeCCCCCcccceEEEec-----CCCceEEEEEcCCCCCEEEEEcCC-----CcEEEEECCCCc
Confidence 777755 4788899876 33332221 11111222222 45677777653 468889987643
No 114
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=93.59 E-value=5.2 Score=39.38 Aligned_cols=192 Identities=8% Similarity=0.024 Sum_probs=99.3
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCC-CCCCCCcceEEEEECCEEEEE----cccCC--------CcCcC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTG-QGPGPRDSHSAILWGHKMIVF----GGTNG--------YKKVN 103 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g-~~P~pR~~hsa~~~~~~lyVf----GG~~~--------~~~~n 103 (650)
++.||+.... ...+++||+.+++...+.... ..+..+....++.-++++|+. |.... .....
T Consensus 79 dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 79 QGHLIACSHG-----LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp TCCEEEEETT-----TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred CCcEEEEecC-----CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCc
Confidence 4667665421 246999999888877653221 111112222333336788886 54211 11135
Q ss_pred eEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecC-CCce-eeccccCCCCCCC
Q 006334 104 DLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLK-TMRW-ASPAVKGDIPVPR 181 (650)
Q Consensus 104 dv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~-t~~W-t~i~~~~~lP~~R 181 (650)
.+|+||+. .+...+.. .. ..-.+++...++++++.... .+.+++||+. +.+. ...... ......
T Consensus 154 ~l~~~~~~-g~~~~~~~--~~---~~~~gi~~s~dg~~lv~~~~-------~~~i~~~~~~~~g~~~~~~~~~-~~~~~~ 219 (296)
T 3e5z_A 154 WVFRLAPD-GTLSAPIR--DR---VKPNGLAFLPSGNLLVSDTG-------DNATHRYCLNARGETEYQGVHF-TVEPGK 219 (296)
T ss_dssp EEEEECTT-SCEEEEEC--CC---SSEEEEEECTTSCEEEEETT-------TTEEEEEEECSSSCEEEEEEEE-CCSSSC
T ss_pred EEEEECCC-CCEEEeec--CC---CCCccEEECCCCCEEEEeCC-------CCeEEEEEECCCCcCcCCCeEe-eCCCCC
Confidence 79999987 55554421 11 11234444456776644332 1468899986 4555 221111 111111
Q ss_pred CcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--C-CEEEEEeccCCCcccCeE
Q 006334 182 DSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--G-TKVYIIGGVGDKHYYNDI 258 (650)
Q Consensus 182 ~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~-~~IyI~GG~~~~~~~~dv 258 (650)
....+..-++.||+..+ +.+.+||+.......+.. +.. -.+++.. + +.||+... ..+
T Consensus 220 p~~i~~d~~G~l~v~~~-------~~v~~~~~~g~~~~~~~~----~~~--~~~~~f~~~d~~~L~v~t~-------~~l 279 (296)
T 3e5z_A 220 TDGLRVDAGGLIWASAG-------DGVHVLTPDGDELGRVLT----PQT--TSNLCFGGPEGRTLYMTVS-------TEF 279 (296)
T ss_dssp CCSEEEBTTSCEEEEET-------TEEEEECTTSCEEEEEEC----SSC--CCEEEEESTTSCEEEEEET-------TEE
T ss_pred CCeEEECCCCCEEEEcC-------CeEEEECCCCCEEEEEEC----CCC--ceeEEEECCCCCEEEEEcC-------CeE
Confidence 11122223577888762 579999998665555542 222 1222221 2 25777642 379
Q ss_pred EEEECCCCc
Q 006334 259 WILNVSTCS 267 (650)
Q Consensus 259 ~~yD~~t~~ 267 (650)
|+|+++++.
T Consensus 280 ~~~~~~~~~ 288 (296)
T 3e5z_A 280 WSIETNVRG 288 (296)
T ss_dssp EEEECSCCB
T ss_pred EEEEccccc
Confidence 999998774
No 115
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=93.55 E-value=3.5 Score=46.75 Aligned_cols=257 Identities=12% Similarity=0.066 Sum_probs=130.6
Q ss_pred ECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCC-CCCcc-eE-EEEECCEEEEEcccCCCcCcCeEEEEECCC
Q 006334 36 SHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGP-GPRDS-HS-AILWGHKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 36 ~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P-~pR~~-hs-a~~~~~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
.++++|.+--. .......+|+.+.....|+.+....... ..... .+ ...-+++.++|.-..+.....+++++|+.+
T Consensus 78 dG~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 78 RNGRFFYVRTH-KDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp ETTEEEEEEEC-TTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred ECCEEEEEEEc-CCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 34565554322 2233567899998888888775421100 00111 11 222367766665443333346899999999
Q ss_pred CcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCC------CcccceEEEEecCCCcee--eccccCCCCC-CCCc
Q 006334 113 KEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGE------ANYLNDLHVLDLKTMRWA--SPAVKGDIPV-PRDS 183 (650)
Q Consensus 113 ~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~------~~~~~dv~~yd~~t~~Wt--~i~~~~~lP~-~R~~ 183 (650)
++.... ...+.... ...+...+++.++++..+... ......++++++.+..-. .+. ..+. +...
T Consensus 157 g~~~~~---~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~---~~~~~~~~~ 229 (695)
T 2bkl_A 157 GEWSKV---DVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH---ERTGDPTTF 229 (695)
T ss_dssp CCBCSS---CCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE---CCCCCTTCE
T ss_pred CCCcCC---cccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE---ecCCCCEEE
Confidence 886411 11111111 334444567777776653210 123567999998876532 221 1111 1122
Q ss_pred ceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEE
Q 006334 184 HSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILN 262 (650)
Q Consensus 184 hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD 262 (650)
...... +++.+++...... ..+++|.+|..+..|..+.... . . ....+..++.+|+.... ......|+.+|
T Consensus 230 ~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~---~-~-~~~~~~~~g~l~~~s~~--~~~~~~l~~~d 301 (695)
T 2bkl_A 230 LQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGV---G-A-KYEVHAWKDRFYVLTDE--GAPRQRVFEVD 301 (695)
T ss_dssp EEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECS---S-C-CEEEEEETTEEEEEECT--TCTTCEEEEEB
T ss_pred EEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCC---C-c-eEEEEecCCcEEEEECC--CCCCCEEEEEe
Confidence 222222 3444444432221 3468888888777888887321 1 1 12223356665555332 22346899999
Q ss_pred CCCCc---EEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 263 VSTCS---WSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 263 ~~t~~---W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
+.+.. |..+... .+. ..-....+.++.|++....+. ...++++++.
T Consensus 302 ~~~~~~~~~~~l~~~--~~~-~~l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~ 350 (695)
T 2bkl_A 302 PAKPARASWKEIVPE--DSS-ASLLSVSIVGGHLSLEYLKDA----TSEVRVATLK 350 (695)
T ss_dssp TTBCSGGGCEEEECC--CSS-CEEEEEEEETTEEEEEEEETT----EEEEEEEETT
T ss_pred CCCCCccCCeEEecC--CCC-CeEEEEEEECCEEEEEEEECC----EEEEEEEeCC
Confidence 98765 8877532 111 111233344777777654321 2456666653
No 116
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.55 E-value=2.8 Score=43.09 Aligned_cols=193 Identities=12% Similarity=0.106 Sum_probs=92.5
Q ss_pred EECCEEEEEccCCCCcccceEEEEECCCCcEEEee---cCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEEC
Q 006334 35 YSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLA---TTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDL 110 (650)
Q Consensus 35 ~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~---~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~ 110 (650)
...+..++.|+.+ ..+.+||+.++.-.... ..+. ...-.++++. +++.++.|+.++ .+.++|+
T Consensus 90 ~s~d~~l~~~s~d-----g~v~lWd~~~~~~~~~~~~~~~~H---~~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~ 156 (344)
T 4gqb_B 90 WVGERGILVASDS-----GAVELWELDENETLIVSKFCKYEH---DDIVSTVSVLSSGTQAVSGSKDI-----CIKVWDL 156 (344)
T ss_dssp EETTTEEEEEETT-----SEEEEEEECTTSSCEEEEEEEECC---SSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred EeCCCeEEEEECC-----CEEEEEeccCCCceeEeeccccCC---CCCEEEEEECCCCCEEEEEeCCC-----eEEEEEC
Confidence 4444445556543 35788888766422111 1111 0111222332 677778787654 5788898
Q ss_pred CCCcEEeeecCCCCCCCCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcc-eeee
Q 006334 111 ESKEWMRPECRGAPPSPRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSH-SSNV 188 (650)
Q Consensus 111 ~t~~W~~l~~~~~~P~~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~h-s~v~ 188 (650)
.+.+-...- .+ . ...-.++....++ .+++.|+.+ +.+.+||+.+.+-...- ......... +++.
T Consensus 157 ~~~~~~~~~-~~-h--~~~V~~~~~~~~~~~~l~s~s~D-------~~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~ 222 (344)
T 4gqb_B 157 AQQVVLSSY-RA-H--AAQVTCVAASPHKDSVFLSCSED-------NRILLWDTRCPKPASQI---GCSAPGYLPTSLAW 222 (344)
T ss_dssp TTTEEEEEE-CC-C--SSCEEEEEECSSCTTEEEEEETT-------SCEEEEETTSSSCEEEC---C----CCCEEEEEE
T ss_pred CCCcEEEEE-cC-c--CCceEEEEecCCCCCceeeeccc-------cccccccccccceeeee---ecceeeccceeeee
Confidence 887543320 10 0 1111222222333 577777763 24788898776543211 111111111 2222
Q ss_pred e--cCEEEEEeccCCCCccCeEEEEECCCCcE-EEeeecCCCCCcccceEEEEE--CC-EEEEEeccCCCcccCeEEEEE
Q 006334 189 I--ANRLFVYGGDCGDQYHGDIDMLDMNSLTW-SRLAIIGSSPGVRAGHAAINI--GT-KVYIIGGVGDKHYYNDIWILN 262 (650)
Q Consensus 189 ~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W-~~i~~~g~~P~~R~~~s~v~~--~~-~IyI~GG~~~~~~~~dv~~yD 262 (650)
. ++.+++.|+.+ ..+.+||+.+.+- ..+.. ......++.+ ++ ++++.|+.++ .+.+||
T Consensus 223 ~p~~~~~l~sg~~d-----g~v~~wd~~~~~~~~~~~~------h~~~v~~v~fsp~g~~~lasgs~D~-----~i~vwd 286 (344)
T 4gqb_B 223 HPQQSEVFVFGDEN-----GTVSLVDTKSTSCVLSSAV------HSQCVTGLVFSPHSVPFLASLSEDC-----SLAVLD 286 (344)
T ss_dssp CSSCTTEEEEEETT-----SEEEEEESCC--CCEEEEC------CSSCEEEEEECSSSSCCEEEEETTS-----CEEEEC
T ss_pred cCCCCcceEEeccC-----CcEEEEECCCCcEEEEEcC------CCCCEEEEEEccCCCeEEEEEeCCC-----eEEEEE
Confidence 2 45677887755 3688899876532 11210 0111222232 23 5666666543 588889
Q ss_pred CCCCcEEE
Q 006334 263 VSTCSWSQ 270 (650)
Q Consensus 263 ~~t~~W~~ 270 (650)
..+.+-..
T Consensus 287 ~~~~~~~~ 294 (344)
T 4gqb_B 287 SSLSELFR 294 (344)
T ss_dssp TTCCEEEE
T ss_pred CCCCcEEE
Confidence 88775433
No 117
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.52 E-value=5.8 Score=39.17 Aligned_cols=162 Identities=6% Similarity=0.019 Sum_probs=76.1
Q ss_pred CEEEEEcccCCCcCcCeEEEEECCC-CcEEeee--cCCCCCCCCcccEEEEEcCCE-EEEEccccCCCCcccceEEEEec
Q 006334 88 HKMIVFGGTNGYKKVNDLHILDLES-KEWMRPE--CRGAPPSPRESHTATLVGDDK-MVIFGGSGEGEANYLNDLHVLDL 163 (650)
Q Consensus 88 ~~lyVfGG~~~~~~~ndv~~yD~~t-~~W~~l~--~~~~~P~~R~~hs~~~~~~~~-Lyv~GG~~~~~~~~~~dv~~yd~ 163 (650)
+.||+.+.. ...+++||+.+ .++..+. .. ..+....-..++...+++ ||+.+..+ +.+.+||+
T Consensus 141 ~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pdg~~l~~~~~~~-------~~i~~~~~ 207 (343)
T 1ri6_A 141 RTLWVPALK-----QDRICLFTVSDDGHLVAQDPAEV-TTVEGAGPRHMVFHPNEQYAYCVNELN-------SSVDVWEL 207 (343)
T ss_dssp SEEEEEEGG-----GTEEEEEEECTTSCEEEEEEEEE-ECSTTCCEEEEEECTTSSEEEEEETTT-------TEEEEEES
T ss_pred CEEEEecCC-----CCEEEEEEecCCCceeeeccccc-ccCCCCCcceEEECCCCCEEEEEeCCC-------CEEEEEEe
Confidence 457665422 24689999887 6665321 10 111111112233344554 66654331 35788887
Q ss_pred C--CCceeeccccCCCCCC---CCcc-eeeee--cCEEEEEeccCCCCccCeEEEEECC--CCcEEEeeecCCCCCcccc
Q 006334 164 K--TMRWASPAVKGDIPVP---RDSH-SSNVI--ANRLFVYGGDCGDQYHGDIDMLDMN--SLTWSRLAIIGSSPGVRAG 233 (650)
Q Consensus 164 ~--t~~Wt~i~~~~~lP~~---R~~h-s~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~--t~~W~~i~~~g~~P~~R~~ 233 (650)
+ +..+..+.....++.. .... .++.. +..||+.+..+ +.+.+||+. +.++..+...... ..-
T Consensus 208 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~~~~---~~~ 279 (343)
T 1ri6_A 208 KDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQPTE---TQP 279 (343)
T ss_dssp SCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEEECS---SSC
T ss_pred cCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeeecCC---Ccc
Confidence 4 3444332211122221 1111 22222 23566655332 478888877 5566666532111 111
Q ss_pred eEEEE-ECC-EEEEEeccCCCcccCeEEEEECCCCcEEEeec
Q 006334 234 HAAIN-IGT-KVYIIGGVGDKHYYNDIWILNVSTCSWSQLDT 273 (650)
Q Consensus 234 ~s~v~-~~~-~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~ 273 (650)
..++. -++ .||+.++.++ .-.+|.+|.++.+++.+..
T Consensus 280 ~~~~~s~dg~~l~~~~~~~~---~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAAGQKSH---HISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp CCEEECTTSSEEEEECTTTC---EEEEEEEETTTTEEEEEEE
T ss_pred ceEEECCCCCEEEEecCCCC---eEEEEEEcCCCceeeEccc
Confidence 12222 234 4555543221 1235566888888887754
No 118
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.51 E-value=6.3 Score=45.02 Aligned_cols=258 Identities=11% Similarity=0.121 Sum_probs=126.1
Q ss_pred ECCEEEEEccCCCCcccceEEEEECC---CCcEEEeecCCCCCC-CCcc-eEEEE-ECCEEEEEcccCCCcCcCeEEEEE
Q 006334 36 SHGAVYIFGGCCGGLHFGDVLMLNLD---TMVWSTLATTGQGPG-PRDS-HSAIL-WGHKMIVFGGTNGYKKVNDLHILD 109 (650)
Q Consensus 36 ~~~~IyvfGG~~~~~~~~dv~~yD~~---t~sW~~l~~~g~~P~-pR~~-hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD 109 (650)
.++++|.+-- ........+|+.+.. ...|+.+........ .... .+... -+++.++|+...+......++++|
T Consensus 117 dG~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 117 RGASVFYSWN-SGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp ETTEEEEEEE-CSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred ECCEEEEEEE-cCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 3455554432 222335788999987 677877633211100 0011 11222 267766666543333335799999
Q ss_pred CCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCC-------CCcccceEEEEecCCCceeeccccCCCCCCCC
Q 006334 110 LESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEG-------EANYLNDLHVLDLKTMRWASPAVKGDIPVPRD 182 (650)
Q Consensus 110 ~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~-------~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~ 182 (650)
+.++++...... ... ....+...+ +.++++..+.. .......++++++.+..-...........+..
T Consensus 196 l~tg~~~~~~~~----~~~-~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~ 269 (741)
T 1yr2_A 196 VADGKPLADELK----WVK-FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR 269 (741)
T ss_dssp TTTCCEEEEEEE----EEE-SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred CCCCCCCCccCC----Cce-eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE
Confidence 999988653111 111 112223334 44444443221 11124568888887654211100011111112
Q ss_pred cceeee-ecCEEEEEeccCCCCccCeEEEEECCCC--c-EEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeE
Q 006334 183 SHSSNV-IANRLFVYGGDCGDQYHGDIDMLDMNSL--T-WSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDI 258 (650)
Q Consensus 183 ~hs~v~-~~~~Iyv~GG~~~~~~~n~v~~yd~~t~--~-W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv 258 (650)
...... -+++.+++.........++++.+|+.+. . |..+... ...... .....++.||+.... ......|
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~---~~~~~~-~~~~dg~~l~~~s~~--~~~~~~l 343 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD---LKAQWD-FVDGVGDQLWFVSGD--GAPLKKI 343 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS---SSSCEE-EEEEETTEEEEEECT--TCTTCEE
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC---CCceEE-EEeccCCEEEEEECC--CCCCCEE
Confidence 222222 2454444444333224578999999877 6 8887621 111221 222456677777433 2234679
Q ss_pred EEEECCC--CcEEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEec
Q 006334 259 WILNVST--CSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQL 314 (650)
Q Consensus 259 ~~yD~~t--~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l 314 (650)
+.+|+.+ ..|..+-... . ... ......++.|++....+ ....++++++
T Consensus 344 ~~~d~~~~~~~~~~l~~~~--~-~~l-~~~~~~~~~lv~~~~~d----g~~~l~~~~~ 393 (741)
T 1yr2_A 344 VRVDLSGSTPRFDTVVPES--K-DNL-ESVGIAGNRLFASYIHD----AKSQVLAFDL 393 (741)
T ss_dssp EEEECSSSSCEEEEEECCC--S-SEE-EEEEEEBTEEEEEEEET----TEEEEEEEET
T ss_pred EEEeCCCCccccEEEecCC--C-CeE-EEEEEECCEEEEEEEEC----CEEEEEEEeC
Confidence 9999988 5798875321 1 111 12333466776664322 1245666665
No 119
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=93.46 E-value=3.9 Score=45.15 Aligned_cols=236 Identities=15% Similarity=0.166 Sum_probs=110.2
Q ss_pred ceEEEEEC--CCCcEEEeecCCCCCCCCcceEEEEE-----CCEEEEEcccCCCcCcCeEEEEECCCCcEEe-eecCCC-
Q 006334 53 GDVLMLNL--DTMVWSTLATTGQGPGPRDSHSAILW-----GHKMIVFGGTNGYKKVNDLHILDLESKEWMR-PECRGA- 123 (650)
Q Consensus 53 ~dv~~yD~--~t~sW~~l~~~g~~P~pR~~hsa~~~-----~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~-l~~~~~- 123 (650)
+.+.+||+ .+.+-...-.. ...-..+++. +++.++++.+. .+.+.++|..+.+-.. +...+.
T Consensus 200 ~~V~v~D~~~~t~~~~~~i~~-----g~~p~~va~sp~~~~dg~~l~v~~~~----~~~v~v~D~~t~~~~~~i~~~g~~ 270 (543)
T 1nir_A 200 ARIDMIDLWAKEPTKVAEIKI-----GIEARSVESSKFKGYEDRYTIAGAYW----PPQFAIMDGETLEPKQIVSTRGMT 270 (543)
T ss_dssp SEEEEEETTSSSCEEEEEEEC-----CSEEEEEEECCSTTCTTTEEEEEEEE----SSEEEEEETTTCCEEEEEECCEEC
T ss_pred CeEEEEECcCCCCcEEEEEec-----CCCcceEEeCCCcCCCCCEEEEEEcc----CCeEEEEeccccccceeecccCcc
Confidence 67999999 55543221111 1222333343 45444444332 2567888988876433 221110
Q ss_pred ------CCCCCcccEEEEEcC-CEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCE-EE
Q 006334 124 ------PPSPRESHTATLVGD-DKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANR-LF 194 (650)
Q Consensus 124 ------~P~~R~~hs~~~~~~-~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~-Iy 194 (650)
.+.+|. .+++...+ ..+|+. ... .+.++.+|..+.+-..+. .++..+.-+.++.. +++ +|
T Consensus 271 ~~~~~~~~~~~v-~~i~~s~~~~~~~vs-~~~------~g~i~vvd~~~~~~l~~~---~i~~~~~~~~~~~spdg~~l~ 339 (543)
T 1nir_A 271 VDTQTYHPEPRV-AAIIASHEHPEFIVN-VKE------TGKVLLVNYKDIDNLTVT---SIGAAPFLHDGGWDSSHRYFM 339 (543)
T ss_dssp SSSCCEESCCCE-EEEEECSSSSEEEEE-ETT------TTEEEEEECTTSSSCEEE---EEECCSSCCCEEECTTSCEEE
T ss_pred cCccccccCCce-EEEEECCCCCEEEEE-ECC------CCeEEEEEecCCCcceeE---EeccCcCccCceECCCCCEEE
Confidence 122222 22222333 444443 332 246889998764322111 11122333333333 344 55
Q ss_pred EEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEEC-CEEEEEeccCCCcccCeEEEEECCCC-----cE
Q 006334 195 VYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIG-TKVYIIGGVGDKHYYNDIWILNVSTC-----SW 268 (650)
Q Consensus 195 v~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~-~~IyI~GG~~~~~~~~dv~~yD~~t~-----~W 268 (650)
+.+.. .+.+.++|..+.+-...-..+..|.+-.+.....-+ +.+|+.+...+ +.|-++|+.+. .|
T Consensus 340 va~~~-----~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d----~~V~v~d~~~~~~~~~~~ 410 (543)
T 1nir_A 340 TAANN-----SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD----GSISLIGTDPKNHPQYAW 410 (543)
T ss_dssp EEEGG-----GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBT
T ss_pred EEecC-----CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC----ceEEEEEeCCCCCchhcC
Confidence 54332 257889999988765543333344432333332223 57777764332 36888888762 27
Q ss_pred EEeecCCCCCCCcceeEEEEE-CC-eEEEEcCCCCCCCCCCcEEEEecCCCCC
Q 006334 269 SQLDTCGQQPQGRFSHAAVVT-GS-DIVIYGGCGEDERPLNELLVLQLGAEHP 319 (650)
Q Consensus 269 ~~l~~~~~~p~~R~~hsav~~-~~-~lyV~GG~~~~~~~~~d~~~l~l~~~~~ 319 (650)
+.+....-.. .....+... ++ .||+-.=.+.+....+.+.++|+.....
T Consensus 411 ~~v~~l~~~g--~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 411 KKVAELQGQG--GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp SEEEEEECSC--SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred eEEEEEEcCC--CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 7665421111 111122233 33 4554321111111245788898875543
No 120
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.38 E-value=7.5 Score=39.32 Aligned_cols=206 Identities=9% Similarity=-0.014 Sum_probs=102.2
Q ss_pred eeEEEEEC--CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEE
Q 006334 30 GHSACYSH--GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHI 107 (650)
Q Consensus 30 ghs~v~~~--~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~ 107 (650)
+-..+... +.+|+.+-. ...+++||+.++....+.. + ......+..-++++|+... +.+++
T Consensus 51 ~egp~~~~~~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~----~-~~v~~i~~~~dg~l~v~~~-------~gl~~ 113 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNIL-----ERELHELHLASGRKTVHAL----P-FMGSALAKISDSKQLIASD-------DGLFL 113 (326)
T ss_dssp EEEEEEETTTTEEEEEEGG-----GTEEEEEETTTTEEEEEEC----S-SCEEEEEEEETTEEEEEET-------TEEEE
T ss_pred CcCCeEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEC----C-CcceEEEEeCCCeEEEEEC-------CCEEE
Confidence 34444443 678877643 2479999999887655432 1 1122222334788887541 35999
Q ss_pred EECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceee
Q 006334 108 LDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSN 187 (650)
Q Consensus 108 yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v 187 (650)
||+.+.+++.+..............+++..++++|+. ............+|+|| +.+...+.. ... .....+
T Consensus 114 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~-~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~---~~~~i~ 185 (326)
T 2ghs_A 114 RDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIG-TMGRKAETGAGSIYHVA--KGKVTKLFA--DIS---IPNSIC 185 (326)
T ss_dssp EETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEE-EEETTCCTTCEEEEEEE--TTEEEEEEE--EES---SEEEEE
T ss_pred EECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEE-eCCCcCCCCceEEEEEe--CCcEEEeeC--CCc---ccCCeE
Confidence 9999988876522111011111233444456777763 32111112245788998 455554321 110 111222
Q ss_pred ee-cC-EEEEEeccCCCCccCeEEEEECC--CC-cEE---EeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeE
Q 006334 188 VI-AN-RLFVYGGDCGDQYHGDIDMLDMN--SL-TWS---RLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDI 258 (650)
Q Consensus 188 ~~-~~-~Iyv~GG~~~~~~~n~v~~yd~~--t~-~W~---~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv 258 (650)
.. ++ .+|+.... .+.+++||.. +. ... .+..... ....-..++.. ++.||+..-. ...+
T Consensus 186 ~s~dg~~lyv~~~~-----~~~I~~~d~~~~~Gl~~~~~~~~~~~~~--~~~~p~gi~~d~~G~lwva~~~-----~~~v 253 (326)
T 2ghs_A 186 FSPDGTTGYFVDTK-----VNRLMRVPLDARTGLPTGKAEVFIDSTG--IKGGMDGSVCDAEGHIWNARWG-----EGAV 253 (326)
T ss_dssp ECTTSCEEEEEETT-----TCEEEEEEBCTTTCCBSSCCEEEEECTT--SSSEEEEEEECTTSCEEEEEET-----TTEE
T ss_pred EcCCCCEEEEEECC-----CCEEEEEEcccccCCcccCceEEEECCC--CCCCCCeeEECCCCCEEEEEeC-----CCEE
Confidence 22 33 57776432 2579999975 44 211 1111100 00111223332 3577776311 1469
Q ss_pred EEEECCCCcEEEee
Q 006334 259 WILNVSTCSWSQLD 272 (650)
Q Consensus 259 ~~yD~~t~~W~~l~ 272 (650)
++||+....-..+.
T Consensus 254 ~~~d~~g~~~~~i~ 267 (326)
T 2ghs_A 254 DRYDTDGNHIARYE 267 (326)
T ss_dssp EEECTTCCEEEEEE
T ss_pred EEECCCCCEEEEEE
Confidence 99999655444443
No 121
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=93.18 E-value=7.3 Score=38.63 Aligned_cols=192 Identities=11% Similarity=0.017 Sum_probs=94.0
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
++.+++.|+.+ ..+.++|..+........... ..........++++++.|+.+ ..+.++|..+.+-.
T Consensus 24 ~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 24 TEPWVLTTLYS-----GRVELWNYETQVEVRSIQVTE---TPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKV 90 (304)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS---SCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCceeEEeeccC---CcEEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEE
Confidence 45666667654 368888988775433222111 111122223356677777654 36788898877543
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEE
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLF 194 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iy 194 (650)
.. ..+ ....-.++....++.+++.|+.+ ..+.+||+.+.. ........ ....-.+++.. ++.++
T Consensus 91 ~~-~~~---h~~~v~~~~~~~~~~~l~sgs~D-------~~v~lWd~~~~~-~~~~~~~~--h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 91 VD-FEA---HPDYIRSIAVHPTKPYVLSGSDD-------LTVKLWNWENNW-ALEQTFEG--HEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp EE-EEC---CSSCEEEEEECSSSSEEEEEETT-------SCEEEEEGGGTT-EEEEEECC--CCSCEEEEEECTTCTTEE
T ss_pred EE-EeC---CCCcEEEEEEcCCCCEEEEECCC-------CeEEEEECCCCc-chhhhhcc--cCCcEEEEEECCCCCCEE
Confidence 21 011 11122334444466777777763 247788876542 11110000 01111122222 34677
Q ss_pred EEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE---CCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 195 VYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI---GTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 195 v~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~---~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
+.|+.+ ..+..||+.+..-...... ...+....+... ++.+++.|+.+ ..+.+||+.+..-
T Consensus 157 ~sgs~D-----~~v~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 157 ASGCLD-----RTVKVWSLGQSTPNFTLTT---GQERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSC 220 (304)
T ss_dssp EEEETT-----SEEEEEETTCSSCSEEEEC---CCTTCEEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEE
T ss_pred EEEeCC-----CeEEEEECCCCCccceecc---CCcCcEEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCcc
Confidence 777765 4788888765431111100 011111111111 34566666643 3688899987653
No 122
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=93.18 E-value=7.5 Score=39.93 Aligned_cols=219 Identities=13% Similarity=0.031 Sum_probs=106.5
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEE-EECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCccc
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAI-LWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESH 131 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~-~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h 131 (650)
..+++||..+... .... .........+ ..++++++.|+.++ .+.+||+.+..-... . ......-.
T Consensus 78 ~~v~i~d~~~~~~--~~~~---~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~--~--~~h~~~v~ 143 (420)
T 3vl1_A 78 GHDFLFNTIIRDG--SKML---KRADYTAVDTAKLQMRRFILGTTEG-----DIKVLDSNFNLQREI--D--QAHVSEIT 143 (420)
T ss_dssp TEEEEEECCSEET--TTTS---CSCCEEEEEEECSSSCEEEEEETTS-----CEEEECTTSCEEEEE--T--TSSSSCEE
T ss_pred CcEEEEEecccce--eeEE---ecCCceEEEEEecCCCEEEEEECCC-----CEEEEeCCCcceeee--c--ccccCccE
Confidence 3688888765421 1111 1111112212 23677888887643 578888887654442 0 11122233
Q ss_pred EEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEE
Q 006334 132 TATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDM 210 (650)
Q Consensus 132 s~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~ 210 (650)
++....++.+++.|+.+ ..+.+||+.+.+-...- . . ....-.++... ++.+++.|+.+ ..+..
T Consensus 144 ~~~~~~~~~~l~s~s~d-------~~i~iwd~~~~~~~~~~-~-~--h~~~v~~~~~~~~~~~l~s~~~d-----~~v~i 207 (420)
T 3vl1_A 144 KLKFFPSGEALISSSQD-------MQLKIWSVKDGSNPRTL-I-G--HRATVTDIAIIDRGRNVLSASLD-----GTIRL 207 (420)
T ss_dssp EEEECTTSSEEEEEETT-------SEEEEEETTTCCCCEEE-E-C--CSSCEEEEEEETTTTEEEEEETT-----SCEEE
T ss_pred EEEECCCCCEEEEEeCC-------CeEEEEeCCCCcCceEE-c-C--CCCcEEEEEEcCCCCEEEEEcCC-----CcEEE
Confidence 44444466777777763 35888998765322110 0 0 01111122222 45666677755 36888
Q ss_pred EECCCCcEEEeeecCCCCCcccceEEEE----------------------ECCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 211 LDMNSLTWSRLAIIGSSPGVRAGHAAIN----------------------IGTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 211 yd~~t~~W~~i~~~g~~P~~R~~~s~v~----------------------~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
||+.+.+-...-.....+. ..-.+++. .++++++.|+.+ ..+.+||+.+..-
T Consensus 208 wd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~ 281 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPH-DGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS-----GVITVHNVFSKEQ 281 (420)
T ss_dssp EETTTTEEEEEECBTTBTT-CCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT-----SCEEEEETTTCCE
T ss_pred eECCCCceeEEeecCCCCC-CCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC-----CeEEEEECCCCce
Confidence 9988765333221100010 00111111 245677777654 3589999987764
Q ss_pred EEeecCCCCCCCcceeEEEEE-CCe-EEEEcCCCCCCCCCCcEEEEecCC
Q 006334 269 SQLDTCGQQPQGRFSHAAVVT-GSD-IVIYGGCGEDERPLNELLVLQLGA 316 (650)
Q Consensus 269 ~~l~~~~~~p~~R~~hsav~~-~~~-lyV~GG~~~~~~~~~d~~~l~l~~ 316 (650)
..... ......-.++++. ++. +++.|+.+ ..+.++++..
T Consensus 282 ~~~~~---~~~~~~v~~~~~~~~~~~~l~~g~~d------g~i~vwd~~~ 322 (420)
T 3vl1_A 282 TIQLP---SKFTCSCNSLTVDGNNANYIYAGYEN------GMLAQWDLRS 322 (420)
T ss_dssp EEEEC---CTTSSCEEEEEECSSCTTEEEEEETT------SEEEEEETTC
T ss_pred eEEcc---cccCCCceeEEEeCCCCCEEEEEeCC------CeEEEEEcCC
Confidence 33221 1111111223333 344 77777642 3577777753
No 123
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.16 E-value=8.1 Score=41.87 Aligned_cols=240 Identities=12% Similarity=0.056 Sum_probs=110.0
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCC------cEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTM------VWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILD 109 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~------sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD 109 (650)
++.+++.|+.+ ..+.+||..+. ....+..... ....-.++++ .+++.++.+|.+.. ....++.+|
T Consensus 77 ~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~v~~~d 148 (615)
T 1pgu_A 77 GSQYLCSGDES-----GKVIVWGWTFDKESNSVEVNVKSEFQV--LAGPISDISWDFEGRRLCVVGEGRD-NFGVFISWD 148 (615)
T ss_dssp TCCEEEEEETT-----SEEEEEEEEEEGGGTEEEEEEEEEEEC--CSSCEEEEEECTTSSEEEEEECCSS-CSEEEEETT
T ss_pred CCCEEEEecCC-----CEEEEEeCCCCcccccccccccchhhc--ccccEEEEEEeCCCCEEEEeccCCC-CccEEEEEE
Confidence 45666666653 35777777543 2333222111 0111222233 25666666765332 234566666
Q ss_pred CCCCcEEeeecCCCCCCCCcccEEEEEcCCE-EEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCC-Ccceee
Q 006334 110 LESKEWMRPECRGAPPSPRESHTATLVGDDK-MVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPR-DSHSSN 187 (650)
Q Consensus 110 ~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~-Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R-~~hs~v 187 (650)
+.+-... .. .....-.++....++. +++.|+.+ ..+.+||..+.+-...- ....... .-.++.
T Consensus 149 --~~~~~~~-~~---~~~~~v~~~~~~~~~~~~l~~~~~d-------~~v~vwd~~~~~~~~~~--~~~~~~~~~v~~~~ 213 (615)
T 1pgu_A 149 --SGNSLGE-VS---GHSQRINACHLKQSRPMRSMTVGDD-------GSVVFYQGPPFKFSASD--RTHHKQGSFVRDVE 213 (615)
T ss_dssp --TCCEEEE-CC---SCSSCEEEEEECSSSSCEEEEEETT-------TEEEEEETTTBEEEEEE--CSSSCTTCCEEEEE
T ss_pred --CCCccee-ee---cCCccEEEEEECCCCCcEEEEEeCC-------CcEEEEeCCCcceeeee--cccCCCCceEEEEE
Confidence 3322211 01 1111223333334443 67777653 35888887765433211 0100000 112222
Q ss_pred ee-c-CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCC
Q 006334 188 VI-A-NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 188 ~~-~-~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
.. + +.+++.|+.+ ..+.+||+.+.+....-..........-.++...++.+++.|+.+ ..+.+||+.+
T Consensus 214 ~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~~wd~~~ 283 (615)
T 1pgu_A 214 FSPDSGEFVITVGSD-----RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGAD-----ATIRVWDVTT 283 (615)
T ss_dssp ECSTTCCEEEEEETT-----CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETT-----SEEEEEETTT
T ss_pred ECCCCCCEEEEEeCC-----CeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCC-----CcEEEEECCC
Confidence 22 4 5677777754 478999988776443220000011111122222266677777643 4689999987
Q ss_pred CcEEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 266 CSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 266 ~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
.+....-.....+....-.+++..++..++.|+.+ ..+.++++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------g~i~~~d~~ 327 (615)
T 1pgu_A 284 SKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD------GTLNFYELG 327 (615)
T ss_dssp TEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETT------SCEEEEETT
T ss_pred CcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECC------CCEEEEECC
Confidence 76544322111111112223333366667776642 345666654
No 124
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.05 E-value=0.55 Score=49.81 Aligned_cols=191 Identities=10% Similarity=0.089 Sum_probs=95.9
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeec-CCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLAT-TGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~-~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
++.+++.|+.++ .+.+||+.+.....+.. .+. ...-.++.+. ++.+++.|+.++ .+.++|+.++
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH---~~~V~~l~f~p~~~~~l~s~s~D~-----~v~iwd~~~~ 197 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGA---GGSITGLKFNPLNTNQFYASSMEG-----TTRLQDFKGN 197 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSS---SCCCCEEEECSSCTTEEEEECSSS-----CEEEEETTSC
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCC---CCCEEEEEEeCCCCCEEEEEeCCC-----EEEEeeccCC
Confidence 456777887544 58888887665433322 111 1111233332 566777777654 4777898877
Q ss_pred cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee---c
Q 006334 114 EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI---A 190 (650)
Q Consensus 114 ~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~---~ 190 (650)
....+.... .......++....++.+++.|+.+ ..+.+||+....-..+. .....-..+.+ +
T Consensus 198 ~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~d-------g~i~~wd~~~~~~~~~~------~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 198 ILRVFASSD--TINIWFCSLDVSASSRMVVTGDNV-------GNVILLNMDGKELWNLR------MHKKKVTHVALNPCC 262 (435)
T ss_dssp EEEEEECCS--SCSCCCCCEEEETTTTEEEEECSS-------SBEEEEESSSCBCCCSB------CCSSCEEEEEECTTC
T ss_pred ceeEEeccC--CCCccEEEEEECCCCCEEEEEeCC-------CcEeeeccCcceeEEEe------cccceEEeeeecCCC
Confidence 655442211 112223344555577888888763 35788887654322211 11111122222 2
Q ss_pred CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 191 NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 191 ~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
+.+++.|+.++ .+.+||+.+..-..... ....-.....++.+ ++..++.|+.+ ..+.+||+.+..
T Consensus 263 ~~~~~s~s~d~-----~v~iwd~~~~~~~~~~~--~~~~h~~~v~~~~~spdg~~l~s~~~D-----~~i~iwd~~~~~ 329 (435)
T 4e54_B 263 DWFLATASVDQ-----TVKIWDLRQVRGKASFL--YSLPHRHPVNAACFSPDGARLLTTDQK-----SEIRVYSASQWD 329 (435)
T ss_dssp SSEEEEEETTS-----BCCEEETTTCCSSSCCS--BCCBCSSCEEECCBCTTSSEEEEEESS-----SCEEEEESSSSS
T ss_pred ceEEEEecCcc-----eeeEEecccccccceEE--EeeeccccccceeECCCCCeeEEEcCC-----CEEEEEECCCCc
Confidence 45677777553 56677876543111000 00000111122222 45666776654 358888887653
No 125
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.05 E-value=1.6 Score=44.73 Aligned_cols=217 Identities=13% Similarity=0.046 Sum_probs=105.0
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
+++.++|...... ...+|++|+.+.....+... +.......+...+++.++|+..+ ..++.+|+.+.+-.
T Consensus 46 Dg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~---~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 46 DGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEG---RGDNTFGGFLSPDDDALFYVKDG-----RNLMRVDLATLEEN 115 (388)
T ss_dssp TSCEEEEEECTTS--SCEEEEEETTTCEEEECCCS---SCBCSSSCEECTTSSEEEEEETT-----TEEEEEETTTCCEE
T ss_pred CCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeC---CCCCccceEEcCCCCEEEEEeCC-----CeEEEEECCCCcce
Confidence 3554455543111 23799999999887776543 11111122333456555555432 47999999988765
Q ss_pred eeecCCCCCCCCcccEE-EEEcCCEEEEEccccCC---------------CCcccceEEEEecCCCceeeccccCCCCCC
Q 006334 117 RPECRGAPPSPRESHTA-TLVGDDKMVIFGGSGEG---------------EANYLNDLHVLDLKTMRWASPAVKGDIPVP 180 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~-~~~~~~~Lyv~GG~~~~---------------~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~ 180 (650)
.+. ..+........ +...++++++.--.... .......++++|+.+.+-..+... + .
T Consensus 116 ~~~---~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~---~-~ 188 (388)
T 3pe7_A 116 VVY---QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE---N-Q 188 (388)
T ss_dssp EEE---ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE---S-S
T ss_pred eee---echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC---C-c
Confidence 542 12222111111 12234444331100000 011236799999988766554311 1 1
Q ss_pred CCcceeeee-cCEEEEEeccC-CCCccCeEEEEECCCCcEEEeeecCCCCCc-ccceEEEEECCEEEEEeccCCCcccCe
Q 006334 181 RDSHSSNVI-ANRLFVYGGDC-GDQYHGDIDMLDMNSLTWSRLAIIGSSPGV-RAGHAAINIGTKVYIIGGVGDKHYYND 257 (650)
Q Consensus 181 R~~hs~v~~-~~~Iyv~GG~~-~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~-R~~~s~v~~~~~IyI~GG~~~~~~~~d 257 (650)
...+....- +++.+++.... .......++.+|........+.. .... ...+....-+++.+++...........
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 265 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT---HAEGESCTHEFWVPDGSALVYVSYLKGSPDRF 265 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC---CCTTEEEEEEEECTTSSCEEEEEEETTCCCEE
T ss_pred cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee---CCCCcccccceECCCCCEEEEEecCCCCCcce
Confidence 112222222 44544443322 12234689999998877666542 1111 111222223454333322222222235
Q ss_pred EEEEECCCCcEEEeec
Q 006334 258 IWILNVSTCSWSQLDT 273 (650)
Q Consensus 258 v~~yD~~t~~W~~l~~ 273 (650)
++++|+.+.+-+.+..
T Consensus 266 l~~~d~~~g~~~~l~~ 281 (388)
T 3pe7_A 266 IYSADPETLENRQLTS 281 (388)
T ss_dssp EEEECTTTCCEEEEEE
T ss_pred EEEEecCCCceEEEEc
Confidence 9999999988776643
No 126
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.99 E-value=3.4 Score=42.07 Aligned_cols=182 Identities=6% Similarity=0.058 Sum_probs=92.6
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
++++++.||.++ .+.++|..+..|....... ......-.++....++.+++.|+.+ ..+.+||..+.
T Consensus 27 ~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~g~~l~s~s~D-------~~v~iw~~~~~ 93 (345)
T 3fm0_A 27 AGTLLASCGGDR-----RIRIWGTEGDSWICKSVLS-EGHQRTVRKVAWSPCGNYLASASFD-------ATTCIWKKNQD 93 (345)
T ss_dssp TSSCEEEEETTS-----CEEEEEEETTEEEEEEEEC-SSCSSCEEEEEECTTSSEEEEEETT-------SCEEEEEECCC
T ss_pred CCCEEEEEcCCC-----eEEEEEcCCCcceeeeeec-cccCCcEEEEEECCCCCEEEEEECC-------CcEEEEEccCC
Confidence 677788887654 4677788887775421110 0111222333334567788888864 24667777776
Q ss_pred ceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCeEEEEECCCC-cEEEeeecCCCCCcccceEEEEE--CC
Q 006334 167 RWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSL-TWSRLAIIGSSPGVRAGHAAINI--GT 241 (650)
Q Consensus 167 ~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~-~W~~i~~~g~~P~~R~~~s~v~~--~~ 241 (650)
.+..+.. +......-..+.+ ++.+++.|+.+ ..+.+||+.+. .+..+.....- ......+.. ++
T Consensus 94 ~~~~~~~---~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~h---~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 94 DFECVTT---LEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLNSH---TQDVKHVVWHPSQ 162 (345)
T ss_dssp -EEEEEE---ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEECCC---CSCEEEEEECSSS
T ss_pred CeEEEEE---ccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEecCc---CCCeEEEEECCCC
Confidence 6554331 1111111122222 46677777765 36788887654 34333321111 111222222 45
Q ss_pred EEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCeEEEEcCC
Q 006334 242 KVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT-GSDIVIYGGC 299 (650)
Q Consensus 242 ~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~-~~~lyV~GG~ 299 (650)
.+++.|+.++ .+..||..+..|..+..... ....-.++.+. ++++++.|+.
T Consensus 163 ~~l~s~s~d~-----~i~~w~~~~~~~~~~~~~~~--h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 163 ELLASASYDD-----TVKLYREEEDDWVCCATLEG--HESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp SCEEEEETTS-----CEEEEEEETTEEEEEEEECC--CSSCEEEEEECTTSSEEEEEET
T ss_pred CEEEEEeCCC-----cEEEEEecCCCEEEEEEecC--CCCceEEEEECCCCCEEEEEeC
Confidence 6777776543 57888988888876543211 11111122232 5667777764
No 127
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.96 E-value=7.4 Score=38.40 Aligned_cols=188 Identities=13% Similarity=0.061 Sum_probs=88.5
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEe
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMR 117 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~ 117 (650)
+.+++.|+.++ .+..++............ .............+..++.|+.++ .+..+|.....-..
T Consensus 98 g~~l~s~~~d~-----~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~s~s~d~-----~~~~~d~~~~~~~~ 164 (340)
T 4aow_A 98 GQFALSGSWDG-----TLRLWDLTTGTTTRRFVG---HTKDVLSVAFSSDNRQIVSGSRDK-----TIKLWNTLGVCKYT 164 (340)
T ss_dssp SSEEEEEETTS-----EEEEEETTTTEEEEEEEC---CSSCEEEEEECTTSSCEEEEETTS-----CEEEECTTSCEEEE
T ss_pred CCEEEEEcccc-----cceEEeecccceeeeecC---CCCceeEEEEeecCccceeecCCC-----eEEEEEeCCCceEE
Confidence 45555555432 466777776655444332 111111122222455666666543 45566665543222
Q ss_pred eecCCCCCCCCcccEEEEE---cCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEE
Q 006334 118 PECRGAPPSPRESHTATLV---GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRL 193 (650)
Q Consensus 118 l~~~~~~P~~R~~hs~~~~---~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~I 193 (650)
.... .....-..+.+ ..+.+++.|+.+ ..+.+||+.+.+..... . . . ...-.+++.. ++.+
T Consensus 165 ~~~~----~~~~~v~~~~~~~~~~~~~~~s~~~d-------~~i~i~d~~~~~~~~~~-~-~-h-~~~v~~~~~s~~~~~ 229 (340)
T 4aow_A 165 VQDE----SHSEWVSCVRFSPNSSNPIIVSCGWD-------KLVKVWNLANCKLKTNH-I-G-H-TGYLNTVTVSPDGSL 229 (340)
T ss_dssp ECSS----SCSSCEEEEEECSCSSSCEEEEEETT-------SCEEEEETTTTEEEEEE-C-C-C-SSCEEEEEECTTSSE
T ss_pred EEec----cccCcccceEEccCCCCcEEEEEcCC-------CEEEEEECCCCceeeEe-c-C-C-CCcEEEEEECCCCCE
Confidence 2111 11111112222 224566666653 24778888776544321 0 1 0 1111122222 4667
Q ss_pred EEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 194 FVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
++.|+.+ ..+..||+.+..-...-.. ...-.+++...+..++.++.+ ..+.+||+++..-
T Consensus 230 l~s~s~D-----g~i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~~ 289 (340)
T 4aow_A 230 CASGGKD-----GQAMLWDLNEGKHLYTLDG-----GDIINALCFSPNRYWLCAATG-----PSIKIWDLEGKII 289 (340)
T ss_dssp EEEEETT-----CEEEEEETTTTEEEEEEEC-----SSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEE
T ss_pred EEEEeCC-----CeEEEEEeccCceeeeecC-----CceEEeeecCCCCceeeccCC-----CEEEEEECCCCeE
Confidence 7777765 4688899887654332211 111222333344455566543 3588889887654
No 128
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.85 E-value=7.5 Score=37.84 Aligned_cols=235 Identities=7% Similarity=0.053 Sum_probs=119.6
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCC-CCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPG-PRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~-pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
++.||+.... ...+.+||+.......+...+..+. ...-+.+++. +++|||.+.. ....+++||....
T Consensus 40 ~g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~ 110 (286)
T 1q7f_A 40 QNDIIVADTN-----NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQ 110 (286)
T ss_dssp TCCEEEEEGG-----GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTSC
T ss_pred CCCEEEEECC-----CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----CCCEEEEECCCCc
Confidence 4688886542 2468999988554444432211111 1223445553 6789987632 1256889995544
Q ss_pred cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCE
Q 006334 114 EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANR 192 (650)
Q Consensus 114 ~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~ 192 (650)
....+.. .....-..+++..++.+|+.... .+.+++||........+.....+. .-..++.. ++.
T Consensus 111 ~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~g~~~~~~~~~~~~~---~p~~i~~~~~g~ 176 (286)
T 1q7f_A 111 FVRKFGA----TILQHPRGVTVDNKGRIIVVECK-------VMRVIIFDQNGNVLHKFGCSKHLE---FPNGVVVNDKQE 176 (286)
T ss_dssp EEEEECT----TTCSCEEEEEECTTSCEEEEETT-------TTEEEEECTTSCEEEEEECTTTCS---SEEEEEECSSSE
T ss_pred EEEEecC----ccCCCceEEEEeCCCCEEEEECC-------CCEEEEEcCCCCEEEEeCCCCccC---CcEEEEECCCCC
Confidence 3333311 11112234454456788886543 146888997654443332111111 11222222 478
Q ss_pred EEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCCCcEEEe
Q 006334 193 LFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQL 271 (650)
Q Consensus 193 Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l 271 (650)
+|+.... .+.+.+||+.......+...+.. ..-..++.. +++||+....++ ..+.+||.....-..+
T Consensus 177 l~v~~~~-----~~~i~~~~~~g~~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 177 IFISDNR-----AHCVKVFNYEGQYLRQIGGEGIT---NYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLISAL 244 (286)
T ss_dssp EEEEEGG-----GTEEEEEETTCCEEEEESCTTTS---CSEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEEEE
T ss_pred EEEEECC-----CCEEEEEcCCCCEEEEEccCCcc---CCCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEEEE
Confidence 8887543 25799999876654444322111 111223332 468888853321 2789999776544444
Q ss_pred ecCCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEecCC
Q 006334 272 DTCGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQLGA 316 (650)
Q Consensus 272 ~~~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l~~ 316 (650)
... .... .-.++++. +++|||... + +.+.++++..
T Consensus 245 ~~~--~~~~-~~~~i~~~~~g~l~vs~~---~----~~v~v~~~~~ 280 (286)
T 1q7f_A 245 ESK--VKHA-QCFDVALMDDGSVVLASK---D----YRLYIYRYVQ 280 (286)
T ss_dssp EES--SCCS-CEEEEEEETTTEEEEEET---T----TEEEEEECSC
T ss_pred ccc--CCCC-cceeEEECCCCcEEEECC---C----CeEEEEEccc
Confidence 331 1111 11233443 678888732 1 4566776653
No 129
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.74 E-value=8 Score=43.45 Aligned_cols=125 Identities=18% Similarity=0.224 Sum_probs=66.9
Q ss_pred eEEEEECCEEEEEccCCCCcccceEEEEEC-CCC--cEEEeecCCCC--CCC---CcceEEEE--ECCE----EEEEccc
Q 006334 31 HSACYSHGAVYIFGGCCGGLHFGDVLMLNL-DTM--VWSTLATTGQG--PGP---RDSHSAIL--WGHK----MIVFGGT 96 (650)
Q Consensus 31 hs~v~~~~~IyvfGG~~~~~~~~dv~~yD~-~t~--sW~~l~~~g~~--P~p---R~~hsa~~--~~~~----lyVfGG~ 96 (650)
.+.++.++.||+...+ .+.++.+|. .+. .|+.-...... +.. ....+.++ .+++ ||+...
T Consensus 56 ~tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred eccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 3456779999997653 246999999 665 48764322100 000 11223445 5666 877432
Q ss_pred CCCcCcCeEEEEECCCCc--EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC--ceee
Q 006334 97 NGYKKVNDLHILDLESKE--WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM--RWAS 170 (650)
Q Consensus 97 ~~~~~~ndv~~yD~~t~~--W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~--~Wt~ 170 (650)
...++.+|..+.+ |+.-. ...........+-++. ++.||+-.+..+ ......++.||..+. .|+.
T Consensus 130 -----dg~l~AlDa~TG~~~W~~~~-~~~~~~~~~~ssP~v~-~g~V~vg~~g~e--~g~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 130 -----DGNVAALNAETGETVWKVEN-SDIKVGSTLTIAPYVV-KDKVIIGSSGAE--LGVRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp -----TSEEEEEETTTCCEEEEEEC-CCGGGTCBCCSCCEEE-TTEEEECCBCGG--GTCCCEEEEEETTTCCEEEEE
T ss_pred -----CCEEEEEECCCCCEEEeecC-CCCCccceeecCCEEE-CCEEEEEecccc--cCCCCeEEEEECCCCcEEEEE
Confidence 2469999998875 87531 1000000111122334 677766332111 112357899998875 4764
No 130
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.73 E-value=4.9 Score=40.42 Aligned_cols=209 Identities=15% Similarity=0.214 Sum_probs=96.9
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECC-EEEEEcccCCCcCcCeEEEEECC-CCc
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGH-KMIVFGGTNGYKKVNDLHILDLE-SKE 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~-~lyVfGG~~~~~~~ndv~~yD~~-t~~ 114 (650)
+++||+.+... ....+++||+.+..++.+..... ......+.+..-++ .||+.+.. ...+.+||+. ..+
T Consensus 50 dg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~-~~~~p~~~a~spdg~~l~~~~~~-----~~~v~v~~~~~~g~ 120 (347)
T 3hfq_A 50 KDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVA-PGTPPAYVAVDEARQLVYSANYH-----KGTAEVMKIAADGA 120 (347)
T ss_dssp TCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEE-ESCCCSEEEEETTTTEEEEEETT-----TTEEEEEEECTTSC
T ss_pred CCeEEEEEecC---CCceEEEEEecCCcEEEeeeeec-CCCCCEEEEECCCCCEEEEEeCC-----CCEEEEEEeCCCCC
Confidence 56766655321 13578999998887766543100 01111222233345 46654421 2457777774 333
Q ss_pred EEeee---cCCCCCCCC----cccEEEEEcCCEEEEEccccCCCCcccceEEEEecC-CCceeeccccCCCCCCCCccee
Q 006334 115 WMRPE---CRGAPPSPR----ESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLK-TMRWASPAVKGDIPVPRDSHSS 186 (650)
Q Consensus 115 W~~l~---~~~~~P~~R----~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~-t~~Wt~i~~~~~lP~~R~~hs~ 186 (650)
...+. ..+..|.+| ..+.+++..++++|+.+... +.+++||+. +.+...+... ..+....-..+
T Consensus 121 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-------~~v~~~~~~~~g~~~~~~~~-~~~~g~~p~~~ 192 (347)
T 3hfq_A 121 LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-------DKVYVYNVSDAGQLSEQSVL-TMEAGFGPRHL 192 (347)
T ss_dssp EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-------TEEEEEEECTTSCEEEEEEE-ECCTTCCEEEE
T ss_pred eeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-------CEEEEEEECCCCcEEEeeeE-EcCCCCCCceE
Confidence 33321 112222111 23345555567766654321 368888887 5555432210 11111011112
Q ss_pred eee-cC-EEEEEeccCCCCccCeEEEEE--CCCCcEEEeeecCCCCCc---ccceEEEEE--CC-EEEEEeccCCCcccC
Q 006334 187 NVI-AN-RLFVYGGDCGDQYHGDIDMLD--MNSLTWSRLAIIGSSPGV---RAGHAAINI--GT-KVYIIGGVGDKHYYN 256 (650)
Q Consensus 187 v~~-~~-~Iyv~GG~~~~~~~n~v~~yd--~~t~~W~~i~~~g~~P~~---R~~~s~v~~--~~-~IyI~GG~~~~~~~~ 256 (650)
+.. ++ .+|+.+... +.+.+|+ ..+.++..+......+.. ......+.+ ++ .||+.+.. .+
T Consensus 193 ~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~-----~~ 262 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELS-----SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG-----YN 262 (347)
T ss_dssp EECTTSSEEEEEETTT-----TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET-----TT
T ss_pred EECCCCCEEEEEeCCC-----CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC-----CC
Confidence 222 34 477765432 3455555 445777665533222221 112222222 34 57676432 24
Q ss_pred eEEEEECCC-CcEEEee
Q 006334 257 DIWILNVST-CSWSQLD 272 (650)
Q Consensus 257 dv~~yD~~t-~~W~~l~ 272 (650)
.+.+||+.. .++..+.
T Consensus 263 ~v~v~~~~~~g~~~~~~ 279 (347)
T 3hfq_A 263 TLAVFAVTADGHLTLIQ 279 (347)
T ss_dssp EEEEEEECGGGCEEEEE
T ss_pred EEEEEEECCCCcEEEeE
Confidence 688888863 3555554
No 131
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.68 E-value=5.6 Score=40.34 Aligned_cols=184 Identities=8% Similarity=0.025 Sum_probs=83.6
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCE-EEEEcccCCCcCcCeEEEEECCCCc--EEeeecCC-----C-
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHK-MIVFGGTNGYKKVNDLHILDLESKE--WMRPECRG-----A- 123 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~-lyVfGG~~~~~~~ndv~~yD~~t~~--W~~l~~~~-----~- 123 (650)
.+.+||..+......-.. ....-.++.+. ++. +++.|+.++ .+..||+.+.. ...+.... .
T Consensus 167 ~v~~~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQG----HRQEILAVSWSPRYDYILATASADS-----RVKLWDVRRASGCLITLDQHNGKKSQAV 237 (408)
T ss_dssp SEEEEESSSSCCCEEECC----CCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTCSSCCSEECCTTTTCSCCCT
T ss_pred eEEEEeCCCcceeeeecC----CCCcEEEEEECCCCCcEEEEEcCCC-----cEEEEECCCCCcccccccccccccceee
Confidence 577888776543221111 01111223332 333 777777644 47788886653 11110000 0
Q ss_pred ----CCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCc--ceeeeecCEEEEEe
Q 006334 124 ----PPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDS--HSSNVIANRLFVYG 197 (650)
Q Consensus 124 ----~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~--hs~v~~~~~Iyv~G 197 (650)
......-..+....++..++.|+.+ ..+.+||+.+..-............... .......+..++++
T Consensus 238 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
T 4a11_B 238 ESANTAHNGKVNGLCFTSDGLHLLTVGTD-------NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV 310 (408)
T ss_dssp TTSSCSCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE
T ss_pred ccccccccCceeEEEEcCCCCEEEEecCC-------CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEE
Confidence 0111112233333456677777763 2488899877654322111111111111 11111223344444
Q ss_pred ccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCC
Q 006334 198 GDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTC 266 (650)
Q Consensus 198 G~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~ 266 (650)
+.+ +.+..||..+.+-...- ..........+...++++++.|+.++ .+.+||+.+.
T Consensus 311 ~~~-----~~i~v~d~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~ 366 (408)
T 4a11_B 311 PYG-----STIAVYTVYSGEQITML---KGHYKTVDCCVFQSNFQELYSGSRDC-----NILAWVPSLY 366 (408)
T ss_dssp EET-----TEEEEEETTTCCEEEEE---CCCSSCEEEEEEETTTTEEEEEETTS-----CEEEEEECC-
T ss_pred ecC-----CEEEEEECcCCcceeee---ccCCCeEEEEEEcCCCCEEEEECCCC-----eEEEEeCCCC
Confidence 433 47889998876543322 11111111222223457777776543 5778887765
No 132
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.61 E-value=7.4 Score=39.43 Aligned_cols=234 Identities=7% Similarity=0.013 Sum_probs=108.6
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE----CCEEEEEcccCCCcCcCeEEEEECCC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW----GHKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~----~~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
++.+++.|+.+ ..+.+||..+......... +.+. .++... ++.+++.|+.+ ..+..||+.+
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~ 175 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNF---EETV--YSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKS 175 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEEC---SSCE--EEEEECSSCSSCCEEEEEESS-----SSEEEEESSS
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccC---CCce--eeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCC
Confidence 34566666643 3688999988765544332 1111 222222 34477777654 3688899877
Q ss_pred CcEEeeecCCCCCCCCcccEEEEEcCCE-EEEEccccCCCCcccceEEEEecCCCce--eecccc-----CCC----CCC
Q 006334 113 KEWMRPECRGAPPSPRESHTATLVGDDK-MVIFGGSGEGEANYLNDLHVLDLKTMRW--ASPAVK-----GDI----PVP 180 (650)
Q Consensus 113 ~~W~~l~~~~~~P~~R~~hs~~~~~~~~-Lyv~GG~~~~~~~~~~dv~~yd~~t~~W--t~i~~~-----~~l----P~~ 180 (650)
.+....- . . ....-.++....++. +++.|+.+ ..+.+||+.+..- ..+... ... ...
T Consensus 176 ~~~~~~~-~-~--~~~~v~~~~~~~~~~~ll~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (408)
T 4a11_B 176 GSCSHIL-Q-G--HRQEILAVSWSPRYDYILATASAD-------SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAH 244 (408)
T ss_dssp SCCCEEE-C-C--CCSCEEEEEECSSCTTEEEEEETT-------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSC
T ss_pred cceeeee-c-C--CCCcEEEEEECCCCCcEEEEEcCC-------CcEEEEECCCCCcccccccccccccceeeccccccc
Confidence 6432210 0 0 111122333333444 67777763 2478888865431 111000 000 001
Q ss_pred CCcceeeee--cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCC--CcccceEEEEECCEEEEEeccCCCcccC
Q 006334 181 RDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSP--GVRAGHAAINIGTKVYIIGGVGDKHYYN 256 (650)
Q Consensus 181 R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P--~~R~~~s~v~~~~~IyI~GG~~~~~~~~ 256 (650)
...-..+.+ ++..++.|+.+ ..+..||+.+..-.......... ............+..+++++.+ .
T Consensus 245 ~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 314 (408)
T 4a11_B 245 NGKVNGLCFTSDGLHLLTVGTD-----NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG-----S 314 (408)
T ss_dssp SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET-----T
T ss_pred cCceeEEEEcCCCCEEEEecCC-----CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC-----C
Confidence 111112222 45666677654 36889998876532221100001 1111111111222334444332 4
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEecCC
Q 006334 257 DIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQLGA 316 (650)
Q Consensus 257 dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l~~ 316 (650)
.+.+||+.+..-...-. ...... .++++. ++.+++.|+.+ ..+.++++..
T Consensus 315 ~i~v~d~~~~~~~~~~~---~~~~~v-~~~~~s~~~~~l~s~~~d------g~i~iw~~~~ 365 (408)
T 4a11_B 315 TIAVYTVYSGEQITMLK---GHYKTV-DCCVFQSNFQELYSGSRD------CNILAWVPSL 365 (408)
T ss_dssp EEEEEETTTCCEEEEEC---CCSSCE-EEEEEETTTTEEEEEETT------SCEEEEEECC
T ss_pred EEEEEECcCCcceeeec---cCCCeE-EEEEEcCCCCEEEEECCC------CeEEEEeCCC
Confidence 78899988765443211 111111 233333 56777777743 3566666653
No 133
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.54 E-value=8 Score=37.40 Aligned_cols=225 Identities=10% Similarity=-0.005 Sum_probs=117.8
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.||+.... .+.+++||+. ..+....... ....-+++++ .++.+|+.... ...+++||+. .++
T Consensus 25 ~g~l~v~~~~-----~~~v~~~d~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~ 89 (299)
T 2z2n_A 25 KGKVWITQHK-----ANMISCINLD-GKITEYPLPT---PDAKVMCLTISSDGEVWFTENA-----ANKIGRITKK-GII 89 (299)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-CCEEEEECSS---TTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCE
T ss_pred CCCEEEEecC-----CCcEEEEcCC-CCeEEecCCc---ccCceeeEEECCCCCEEEeCCC-----CCeEEEECCC-CcE
Confidence 4688875321 2468999998 7777654321 1122234444 25788886432 2458899886 555
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLF 194 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iy 194 (650)
+.+... .....-+.++...++.||+.... ...+++||+ +.+........ ....-..++.. ++.+|
T Consensus 90 ~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~d~-~g~~~~~~~~~---~~~~~~~i~~~~~g~l~ 155 (299)
T 2z2n_A 90 KEYTLP---NPDSAPYGITEGPNGDIWFTEMN-------GNRIGRITD-DGKIREYELPN---KGSYPSFITLGSDNALW 155 (299)
T ss_dssp EEEECS---STTCCEEEEEECTTSCEEEEETT-------TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECTTSCEE
T ss_pred EEEeCC---CcCCCceeeEECCCCCEEEEecC-------CceEEEECC-CCCEEEecCCC---CCCCCceEEEcCCCCEE
Confidence 554211 11222334444446788886432 135888998 55555432111 11112233332 46788
Q ss_pred EEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCCCcEEEeec
Q 006334 195 VYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDT 273 (650)
Q Consensus 195 v~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~ 273 (650)
+..-. .+.+++||+ +.+...+..... ...-..++.. +++||+.... ...+++||+ +..+..+..
T Consensus 156 v~~~~-----~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~ 220 (299)
T 2z2n_A 156 FTENQ-----NNAIGRITE-SGDITEFKIPTP---ASGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFKI 220 (299)
T ss_dssp EEETT-----TTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC
T ss_pred EEeCC-----CCEEEEEcC-CCcEEEeeCCCC---CCcceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEEC
Confidence 76421 257999999 777776532111 1112233333 3578877422 347999999 777766542
Q ss_pred CCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEec
Q 006334 274 CGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQL 314 (650)
Q Consensus 274 ~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l 314 (650)
.. .. ..-.++++. ++.||+.... .+.+++++.
T Consensus 221 ~~--~~-~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~ 253 (299)
T 2z2n_A 221 PT--PN-ARPHAITAGAGIDLWFTEWG------ANKIGRLTS 253 (299)
T ss_dssp SS--TT-CCEEEEEECSTTCEEEEETT------TTEEEEEET
T ss_pred CC--CC-CCceeEEECCCCCEEEeccC------CceEEEECC
Confidence 11 11 112233333 5678776421 135666665
No 134
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=92.51 E-value=12 Score=40.43 Aligned_cols=234 Identities=9% Similarity=-0.001 Sum_probs=109.7
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCC----c-EEEeecCCCCCCCC-cceEEEEE--CCEEEEEcccCCCcCcCeEEEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTM----V-WSTLATTGQGPGPR-DSHSAILW--GHKMIVFGGTNGYKKVNDLHIL 108 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~----s-W~~l~~~g~~P~pR-~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~y 108 (650)
++.++++|+ .+.+.+||+.+. . -..+... . .. ....+... ++++++.|+.++ .+.++
T Consensus 29 dg~~l~~~~------~~~v~v~~~~~~~~~~~~~~~~~~h---~-~~~v~~~~~sp~~~~~~l~s~~~dg-----~v~vw 93 (615)
T 1pgu_A 29 TTNAIAYPC------GKSAFVRCLDDGDSKVPPVVQFTGH---G-SSVVTTVKFSPIKGSQYLCSGDESG-----KVIVW 93 (615)
T ss_dssp TTTEEEEEE------TTEEEEEECCSSCCSSCSEEEECTT---T-TSCEEEEEECSSTTCCEEEEEETTS-----EEEEE
T ss_pred CCCEEEEec------CCeEEEEECCCCCCccccceEEecC---C-CceEEEEEECcCCCCCEEEEecCCC-----EEEEE
Confidence 455666665 136889998865 3 2223211 1 11 22222333 667778787643 56777
Q ss_pred ECCCC------cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCC
Q 006334 109 DLESK------EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRD 182 (650)
Q Consensus 109 D~~t~------~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~ 182 (650)
|..+. ....+..... ....-..+....+++.++.++.+. .....++.||..... ..+. . . ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~---~~~~~v~~~d~~~~~-~~~~---~-~-~~~ 162 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQV--LAGPISDISWDFEGRRLCVVGEGR---DNFGVFISWDSGNSL-GEVS---G-H-SQR 162 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEEC--CSSCEEEEEECTTSSEEEEEECCS---SCSEEEEETTTCCEE-EECC---S-C-SSC
T ss_pred eCCCCcccccccccccchhhc--ccccEEEEEEeCCCCEEEEeccCC---CCccEEEEEECCCcc-eeee---c-C-Ccc
Confidence 77543 2222211111 112233444445677777777532 123467777732211 1111 1 0 111
Q ss_pred cceeeee-cCE-EEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcc-cceEEEE-EC-CEEEEEeccCCCcccCe
Q 006334 183 SHSSNVI-ANR-LFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVR-AGHAAIN-IG-TKVYIIGGVGDKHYYND 257 (650)
Q Consensus 183 ~hs~v~~-~~~-Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R-~~~s~v~-~~-~~IyI~GG~~~~~~~~d 257 (650)
-.++... ++. +++.|+.+ ..+..||..+.+-...- ....... .-.+++. .+ +++++.|+.+ ..
T Consensus 163 v~~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~ 230 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDD-----GSVVFYQGPPFKFSASD--RTHHKQGSFVRDVEFSPDSGEFVITVGSD-----RK 230 (615)
T ss_dssp EEEEEECSSSSCEEEEEETT-----TEEEEEETTTBEEEEEE--CSSSCTTCCEEEEEECSTTCCEEEEEETT-----CC
T ss_pred EEEEEECCCCCcEEEEEeCC-----CcEEEEeCCCcceeeee--cccCCCCceEEEEEECCCCCCEEEEEeCC-----Ce
Confidence 1122222 233 67777654 47888998766543321 1111100 1222232 24 5677777654 36
Q ss_pred EEEEECCCCcEEEee-cCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 258 IWILNVSTCSWSQLD-TCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 258 v~~yD~~t~~W~~l~-~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
+.+||+.+.+....- ........... ++.+.++.+++.|+.+ ..+.++++.
T Consensus 231 i~vwd~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~l~~~~~d------~~i~~wd~~ 282 (615)
T 1pgu_A 231 ISCFDGKSGEFLKYIEDDQEPVQGGIF-ALSWLDSQKFATVGAD------ATIRVWDVT 282 (615)
T ss_dssp EEEEETTTCCEEEECCBTTBCCCSCEE-EEEESSSSEEEEEETT------SEEEEEETT
T ss_pred EEEEECCCCCEeEEecccccccCCceE-EEEEcCCCEEEEEcCC------CcEEEEECC
Confidence 899999887654432 10001111111 2222266777777642 245556654
No 135
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.49 E-value=11 Score=39.09 Aligned_cols=218 Identities=15% Similarity=0.184 Sum_probs=101.9
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCccc
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESH 131 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h 131 (650)
+.++++|..+++...+-.... . ...=.++++. ++++++.|+.++ .+.++|..+.+-.... .+ ...+ .
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~-~-~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~-~~--h~~~--v 192 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQ-P-GEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNM-TS--HSAR--V 192 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCS-T-TCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEE-CC--CSSC--E
T ss_pred CEEEEEECCCCCEEEEEEecC-C-CCcEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEE-eC--CCCc--e
Confidence 468999999988766543311 0 1111223332 677788887654 5788898887543321 11 1111 1
Q ss_pred EEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeee--ecCEEEEEeccCCCCccCeEE
Q 006334 132 TATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNV--IANRLFVYGGDCGDQYHGDID 209 (650)
Q Consensus 132 s~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~--~~~~Iyv~GG~~~~~~~n~v~ 209 (650)
..... ++.+++.|+.+ ..+..+|............+ .......+. -++..++.|+.+ +.+.
T Consensus 193 ~~~s~-~~~~l~sgs~d-------~~i~~~d~~~~~~~~~~~~~----h~~~~~~~~~~~~g~~l~s~~~D-----~~v~ 255 (420)
T 4gga_A 193 GSLSW-NSYILSSGSRS-------GHIHHHDVRVAEHHVATLSG----HSQEVCGLRWAPDGRHLASGGND-----NLVN 255 (420)
T ss_dssp EEEEE-ETTEEEEEETT-------SEEEEEETTSSSCEEEEEEC----CSSCEEEEEECTTSSEEEEEETT-----SCEE
T ss_pred EEEee-CCCEEEEEeCC-------CceeEeeecccceeeEEecc----cccceeeeeecCCCCeeeeeecc-----ccce
Confidence 22223 56677777763 24677776554332211111 111111111 245666666654 3567
Q ss_pred EEECCCCc--EEEeeecCCCCCcccceEEEE--ECCEEEEE-eccCCCcccCeEEEEECCCCcEEEeecCCCCCCCccee
Q 006334 210 MLDMNSLT--WSRLAIIGSSPGVRAGHAAIN--IGTKVYII-GGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSH 284 (650)
Q Consensus 210 ~yd~~t~~--W~~i~~~g~~P~~R~~~s~v~--~~~~IyI~-GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~h 284 (650)
++|..+.. +..+....... ..-.+++. .+..++.. ||..+ ..|.+||+.+..-...-.. ...-.
T Consensus 256 i~~~~~~~~~~~~~~~~~~~~--~~V~~~~~~p~~~~~la~~~gs~D----~~I~iwd~~t~~~~~~~~~-----~~~v~ 324 (420)
T 4gga_A 256 VWPSAPGEGGWVPLQTFTQHQ--GAVKAVAWCPWQSNVLATGGGTSD----RHIRIWNVCSGACLSAVDA-----HSQVC 324 (420)
T ss_dssp EEESSCCSSCSCCSEEECCCS--SCEEEEEECTTCTTEEEEEECTTT----CEEEEEETTTTEEEEEEEC-----SSCEE
T ss_pred EEeeccccccceeeeeecccC--CceeeeeeCCCcccEEEEEeecCC----CEEEEEeCCccccceeecc-----cccee
Confidence 77765432 11111100110 11111222 23345444 44333 3588999988765443221 11112
Q ss_pred EEEEE-C-CeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 285 AAVVT-G-SDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 285 sav~~-~-~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
+++.. + +.+++..|..+ ..+.++++.
T Consensus 325 ~~~~~~~~~~lv~~sg~~d-----~~I~iwd~~ 352 (420)
T 4gga_A 325 SILWSPHYKELISGHGFAQ-----NQLVIWKYP 352 (420)
T ss_dssp EEEEETTTTEEEEEECTTT-----CCEEEEETT
T ss_pred eeeecCCCCeEEEEEecCC-----CEEEEEECC
Confidence 23333 3 34555555432 356677665
No 136
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=92.48 E-value=6.5 Score=37.44 Aligned_cols=153 Identities=16% Similarity=0.129 Sum_probs=85.6
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEECCC--CcEEEeecC---CCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCe
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNLDT--MVWSTLATT---GQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVND 104 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t--~sW~~l~~~---g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~nd 104 (650)
+++.+++.+|+|=| +.+|+++... ......... ...|.. .. ++... ++++|+|-| +.
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET-------TE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC-------CE
Confidence 34557999999988 4689998765 333333221 122321 11 22222 678999988 57
Q ss_pred EEEEECCCCcE-EeeecCCCCCC-CCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceee-----cc-ccCC
Q 006334 105 LHILDLESKEW-MRPECRGAPPS-PRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-----PA-VKGD 176 (650)
Q Consensus 105 v~~yD~~t~~W-~~l~~~~~~P~-~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-----i~-~~~~ 176 (650)
+|+|+..+..- +.+..-+ .|. ...--++....++++|+|-|. ..|+||..+++-.. +. .-..
T Consensus 75 yw~~~~~~~~~Pk~i~~~G-~p~~~~~iDAA~~~~~g~~yfFkg~---------~ywr~d~~~~~~~~gyPr~i~~~w~G 144 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKLG-LGADVAQVTGALRSGRGKMLLFSGR---------RLWRFDVKAQMVDPRSASEVDRMFPG 144 (195)
T ss_dssp EEEEETTEEEEEEEGGGGT-CCTTCCCCCEEEECSTTEEEEEETT---------EEEEEETTTTEECGGGCEEHHHHSTT
T ss_pred EEEEcCCccCCCEEeeecc-cCCCccceeEEEEcCCCeEEEEeCC---------EEEEEeCCcccccCCCccChhhcCCC
Confidence 88888543211 1121111 222 112223333457899999763 48999987643221 10 0012
Q ss_pred CCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEE
Q 006334 177 IPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWS 219 (650)
Q Consensus 177 lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~ 219 (650)
+| ..-.++...++.+|+|-| +..|+||..+..-.
T Consensus 145 vp--~~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~v~ 178 (195)
T 1itv_A 145 VP--LDTHDVFQFREKAYFCQD-------RFYWRVSSRSELNQ 178 (195)
T ss_dssp SC--SSCSEEEEETTEEEEEET-------TEEEEEECCTTCCE
T ss_pred CC--CCCCEEEEeCCeEEEEeC-------CEEEEEECCccEEe
Confidence 22 223455556799999988 67899998776533
No 137
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.46 E-value=6.7 Score=40.98 Aligned_cols=66 Identities=9% Similarity=0.110 Sum_probs=36.7
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
++..++.|+.+ ..+..+|+.+......- .+ ....-..+....++.+++.|+.+ ..+.+||+.+.
T Consensus 203 ~~~~l~s~s~D-----~~i~~wd~~~~~~~~~~-~~---h~~~v~~~~~~~~g~~l~s~s~D-------~~v~vwd~~~~ 266 (410)
T 1vyh_C 203 NGDHIVSASRD-----KTIKMWEVQTGYCVKTF-TG---HREWVRMVRPNQDGTLIASCSND-------QTVRVWVVATK 266 (410)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTCCEEEEE-EC---CSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTC
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEE-eC---CCccEEEEEECCCCCEEEEEcCC-------CeEEEEECCCC
Confidence 56667777754 36888898877643321 11 01111223333457777877763 24777777665
Q ss_pred ce
Q 006334 167 RW 168 (650)
Q Consensus 167 ~W 168 (650)
..
T Consensus 267 ~~ 268 (410)
T 1vyh_C 267 EC 268 (410)
T ss_dssp CE
T ss_pred ce
Confidence 43
No 138
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=92.44 E-value=8.2 Score=37.88 Aligned_cols=194 Identities=11% Similarity=0.163 Sum_probs=94.6
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEe-ecCCCCCCCCcceEEEEE-CCEEEEEcccCC----------CcCcCeE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTL-ATTGQGPGPRDSHSAILW-GHKMIVFGGTNG----------YKKVNDL 105 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l-~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~----------~~~~ndv 105 (650)
+.||+.... +.+++||+. ++...+ ...........-+.+++. ++++|+...... ......+
T Consensus 83 g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l 155 (314)
T 1pjx_A 83 NQLFVADMR------LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSI 155 (314)
T ss_dssp SEEEEEETT------TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEE
T ss_pred CcEEEEECC------CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeE
Confidence 688886541 369999998 777665 332110001112333333 678887653321 1113579
Q ss_pred EEEECCCCcEEeeecCCCCCCCCcccEEEEE----cCC-EEEEEccccCCCCcccceEEEEecC-CCceeeccccCCCCC
Q 006334 106 HILDLESKEWMRPECRGAPPSPRESHTATLV----GDD-KMVIFGGSGEGEANYLNDLHVLDLK-TMRWASPAVKGDIPV 179 (650)
Q Consensus 106 ~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~----~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~-t~~Wt~i~~~~~lP~ 179 (650)
++||+. .+...+... . .....++.. .++ .||+.... .+.+++||++ +.++........++.
T Consensus 156 ~~~~~~-g~~~~~~~~--~---~~~~~i~~~~~~d~dg~~l~v~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 156 YCFTTD-GQMIQVDTA--F---QFPNGIAVRHMNDGRPYQLIVAETP-------TKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp EEECTT-SCEEEEEEE--E---SSEEEEEEEECTTSCEEEEEEEETT-------TTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred EEECCC-CCEEEeccC--C---CCcceEEEecccCCCCCEEEEEECC-------CCeEEEEECCCCCccccceEEEECCC
Confidence 999987 555543111 0 112334444 455 46665332 1468889876 444322111111211
Q ss_pred C--CCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcE-EEeeecCCCCCcccceEEEE-ECCE-EEEEeccCCCc
Q 006334 180 P--RDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTW-SRLAIIGSSPGVRAGHAAIN-IGTK-VYIIGGVGDKH 253 (650)
Q Consensus 180 ~--R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W-~~i~~~g~~P~~R~~~s~v~-~~~~-IyI~GG~~~~~ 253 (650)
. ..-..++.. ++.+|+.... .+.+.+||+.+.+. ..+. .+. ..-.+++. -+++ ||+....
T Consensus 223 ~~~~~p~~i~~d~~G~l~v~~~~-----~~~i~~~d~~~g~~~~~~~----~~~-~~~~~i~~~~dg~~l~v~~~~---- 288 (314)
T 1pjx_A 223 THEGGADGMDFDEDNNLLVANWG-----SSHIEVFGPDGGQPKMRIR----CPF-EKPSNLHFKPQTKTIFVTEHE---- 288 (314)
T ss_dssp CSSCEEEEEEEBTTCCEEEEEET-----TTEEEEECTTCBSCSEEEE----CSS-SCEEEEEECTTSSEEEEEETT----
T ss_pred CCCCCCCceEECCCCCEEEEEcC-----CCEEEEEcCCCCcEeEEEe----CCC-CCceeEEECCCCCEEEEEeCC----
Confidence 1 111122222 4678876432 14789999885442 2222 121 11222332 2344 7776432
Q ss_pred ccCeEEEEECCCC
Q 006334 254 YYNDIWILNVSTC 266 (650)
Q Consensus 254 ~~~dv~~yD~~t~ 266 (650)
...+++|++...
T Consensus 289 -~~~l~~~~~~~~ 300 (314)
T 1pjx_A 289 -NNAVWKFEWQRN 300 (314)
T ss_dssp -TTEEEEEECSSC
T ss_pred -CCeEEEEeCCCC
Confidence 247999998754
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.38 E-value=9 Score=37.62 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=57.3
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCC--CCcceEEEEE-CC-EEEEEccc---CCCc---CcCeEEE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPG--PRDSHSAILW-GH-KMIVFGGT---NGYK---KVNDLHI 107 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~--pR~~hsa~~~-~~-~lyVfGG~---~~~~---~~ndv~~ 107 (650)
+.+|+.+.. ...+++||+.+.+-......+. +. ...-+.+++. ++ .||+.... .... ..+.+++
T Consensus 46 ~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v 119 (337)
T 1pby_B 46 RIAYATVNK-----SESLVKIDLVTGETLGRIDLST-PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119 (337)
T ss_dssp SEEEEEETT-----TTEEEEEETTTCCEEEEEECCB-TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred CEEEEEeCC-----CCeEEEEECCCCCeEeeEEcCC-cccccccccceEECCCCCEEEEEecccccccccccccCceEEE
Confidence 367776542 2479999998877543222211 00 0011233333 44 67765421 1111 2378999
Q ss_pred EECCCCcEEeeecCCCCCCCCcccEEEEEcCCE-EEEEccccCCCCcccceEEEEecCCCcee
Q 006334 108 LDLESKEWMRPECRGAPPSPRESHTATLVGDDK-MVIFGGSGEGEANYLNDLHVLDLKTMRWA 169 (650)
Q Consensus 108 yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~-Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt 169 (650)
||+.+.+....-..+ ..-..++...+++ ||+.. +.+++||+.+.+-.
T Consensus 120 ~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~----------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 120 YDAETLSRRKAFEAP-----RQITMLAWARDGSKLYGLG----------RDLHVMDPEAGTLV 167 (337)
T ss_dssp EETTTTEEEEEEECC-----SSCCCEEECTTSSCEEEES----------SSEEEEETTTTEEE
T ss_pred EECCCCcEEEEEeCC-----CCcceeEECCCCCEEEEeC----------CeEEEEECCCCcEe
Confidence 999887654421111 1123344444554 55541 35889998877644
No 140
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=92.32 E-value=4.2 Score=39.08 Aligned_cols=185 Identities=15% Similarity=0.069 Sum_probs=94.2
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.||+... .+.+++||+.......+...+ ...-..+++. +++||+.... .+.+++||..+...
T Consensus 77 ~g~l~v~~~------~~~i~~~d~~~~~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 77 AGTVYVTDF------NNRVVTLAAGSNNQTVLPFDG----LNYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQ 141 (270)
T ss_dssp TCCEEEEET------TTEEEEECTTCSCCEECCCCS----CSSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSC
T ss_pred CCCEEEEcC------CCEEEEEeCCCceEeeeecCC----cCCCcceEECCCCCEEEEECC-----CCEEEEEECCCcee
Confidence 356776543 236888888776544432211 1222344443 5778886432 24688887766554
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLF 194 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iy 194 (650)
..... .....-..+++..+++||+.... .+.+.+||........... ..+ ..-..++.. ++.+|
T Consensus 142 ~~~~~----~~~~~p~~i~~~~~g~l~v~~~~-------~~~i~~~~~~~~~~~~~~~-~~~---~~p~~i~~d~~g~l~ 206 (270)
T 1rwi_B 142 TVLPF----TGLNDPDGVAVDNSGNVYVTDTD-------NNRVVKLEAESNNQVVLPF-TDI---TAPWGIAVDEAGTVY 206 (270)
T ss_dssp EECCC----CSCCSCCCEEECTTCCEEEEEGG-------GTEEEEECTTTCCEEECCC-SSC---CSEEEEEECTTCCEE
T ss_pred Eeecc----ccCCCceeEEEeCCCCEEEEECC-------CCEEEEEecCCCceEeecc-cCC---CCceEEEECCCCCEE
Confidence 33211 11112234444456788886543 2468899987665433211 111 111223332 35788
Q ss_pred EEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCC
Q 006334 195 VYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 195 v~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
+..... +.+.+||+....-..+. ......-.+++.. +++||+.... .+.|.+|++..
T Consensus 207 v~~~~~-----~~v~~~~~~~~~~~~~~----~~~~~~p~~i~~~~~g~l~v~~~~-----~~~v~~~~~~~ 264 (270)
T 1rwi_B 207 VTEHNT-----NQVVKLLAGSTTSTVLP----FTGLNTPLAVAVDSDRTVYVADRG-----NDRVVKLTSLE 264 (270)
T ss_dssp EEETTT-----SCEEEECTTCSCCEECC----CCSCSCEEEEEECTTCCEEEEEGG-----GTEEEEECCCG
T ss_pred EEECCC-----CcEEEEcCCCCcceeec----cCCCCCceeEEECCCCCEEEEECC-----CCEEEEEcCCC
Confidence 875422 47899998765433322 1111112233332 3578887542 34677776653
No 141
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=92.31 E-value=18 Score=41.04 Aligned_cols=124 Identities=19% Similarity=0.233 Sum_probs=68.7
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEECCCCc--EEEeecCCCCC-----CCCcceEEEEECCEEEEEcccCCCcCcCe
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMV--WSTLATTGQGP-----GPRDSHSAILWGHKMIVFGGTNGYKKVND 104 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~s--W~~l~~~g~~P-----~pR~~hsa~~~~~~lyVfGG~~~~~~~nd 104 (650)
+.++.++.||+... .+.++.+|..+++ |+.-....... ......+.++.+++||+... ...
T Consensus 65 ~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~ 132 (689)
T 1yiq_A 65 TPIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGR 132 (689)
T ss_dssp CCEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred cCEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCE
Confidence 44567999999765 2469999987654 87643221000 00112234567888888542 246
Q ss_pred EEEEECCCCc--EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc--eee
Q 006334 105 LHILDLESKE--WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR--WAS 170 (650)
Q Consensus 105 v~~yD~~t~~--W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~--Wt~ 170 (650)
++.+|..+.+ |+.-.............+-++. ++.+|+-.+..+ ...-..++.||..+.+ |+.
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~--~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV-NGKVVIGNGGAE--FGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE-TTEEEECCBCTT--TCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEeeeecCcCCCCCCccccCCcEEE-CCEEEEEeCCCc--cCCCCEEEEEECCCCcEEEEe
Confidence 8999998874 8764210000001111222334 677776332211 1234579999998765 875
No 142
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=92.23 E-value=6.1 Score=41.71 Aligned_cols=159 Identities=11% Similarity=0.012 Sum_probs=80.1
Q ss_pred CEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc
Q 006334 88 HKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR 167 (650)
Q Consensus 88 ~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~ 167 (650)
+++++.|+.+ ..+.+||+.+......-..+ . ...-.+++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 210 ~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~-h--~~~v~~~~~s-d~~~l~s~~~d-------~~v~vwd~~~~~ 273 (450)
T 2vdu_B 210 HQFIITSDRD-----EHIKISHYPQCFIVDKWLFG-H--KHFVSSICCG-KDYLLLSAGGD-------DKIFAWDWKTGK 273 (450)
T ss_dssp CEEEEEEETT-----SCEEEEEESCTTCEEEECCC-C--SSCEEEEEEC-STTEEEEEESS-------SEEEEEETTTCC
T ss_pred CcEEEEEcCC-----CcEEEEECCCCceeeeeecC-C--CCceEEEEEC-CCCEEEEEeCC-------CeEEEEECCCCc
Confidence 7788888764 36888888776543321111 1 1112233333 67777777753 358888887765
Q ss_pred eeeccccC----CC-----------------CCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEEC--C-CCcEEEee
Q 006334 168 WASPAVKG----DI-----------------PVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDM--N-SLTWSRLA 222 (650)
Q Consensus 168 Wt~i~~~~----~l-----------------P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~--~-t~~W~~i~ 222 (650)
....-... .+ .....-..++.. ++.++++++... +.+.+||+ . ...+..+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d----~~i~iw~~~~~~~~~l~~~~ 349 (450)
T 2vdu_B 274 NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT----KCIIILEMSEKQKGDLALKQ 349 (450)
T ss_dssp EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC----SEEEEEEECSSSTTCEEEEE
T ss_pred EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC----CeEEEEEeccCCCCceeecc
Confidence 33211000 00 000111111222 244444443221 57888887 3 34555554
Q ss_pred ecCCCCCcccceEEEEECCEEEEEeccCCC----cccCeEEEEECCCCcEE
Q 006334 223 IIGSSPGVRAGHAAINIGTKVYIIGGVGDK----HYYNDIWILNVSTCSWS 269 (650)
Q Consensus 223 ~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~----~~~~dv~~yD~~t~~W~ 269 (650)
.... ...-.+++...+.+++..+.... ...-++|.++.+++.|.
T Consensus 350 ~~~~---~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 350 IITF---PYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp EEEC---SSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred Eecc---CCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 3211 12233445556777777654321 22337888888888886
No 143
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.21 E-value=11 Score=38.35 Aligned_cols=230 Identities=11% Similarity=0.051 Sum_probs=110.5
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
++..++.|+.++ .+.++|..+......... +.......+...++..++.||.++ .+..|+.....-.
T Consensus 75 d~~~l~s~s~Dg-----~v~vWd~~~~~~~~~~~~---~~~~v~~~~~sp~g~~lasg~~d~-----~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 75 DKRRIVSSSQDG-----KVIVWDSFTTNKEHAVTM---PCTWVMACAYAPSGCAIACGGLDN-----KCSVYPLTFDKNE 141 (354)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTCCEEEEEEC---SSSCCCEEEECTTSSEEEEESTTS-----EEEEEECCCCTTC
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCCcceEEec---CCCCEEEEEECCCCCEEEEeeCCC-----CEEEEEEeccccc
Confidence 356666677543 588889877665443322 111222222233677888888654 4566665432100
Q ss_pred ee-ecCCCC-CCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee----c
Q 006334 117 RP-ECRGAP-PSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI----A 190 (650)
Q Consensus 117 ~l-~~~~~~-P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~----~ 190 (650)
.. ...... .....-..+....++..++.|+.+ ..+.+||+.+.+....- .+ ....-.++.+ +
T Consensus 142 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D-------~~v~lwd~~~~~~~~~~-~~----h~~~v~~~~~~~~~~ 209 (354)
T 2pbi_B 142 NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD-------GTCALWDVESGQLLQSF-HG----HGADVLCLDLAPSET 209 (354)
T ss_dssp CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT-------SEEEEEETTTCCEEEEE-EC----CSSCEEEEEECCCSS
T ss_pred cccccceeeeccCCcEEEEEEeCCCCEEEEEeCC-------CcEEEEeCCCCeEEEEE-cC----CCCCeEEEEEEeCCC
Confidence 00 000000 001111122223345556666653 35788898776543211 00 0011111111 3
Q ss_pred CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 191 NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 191 ~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
+.+++.|+.+ ..+..||+.+.+....- .. ......++.+ ++.+++.|+.++ .+.+||+.+..-
T Consensus 210 g~~l~sgs~D-----g~v~~wd~~~~~~~~~~---~~--h~~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~ 274 (354)
T 2pbi_B 210 GNTFVSGGCD-----KKAMVWDMRSGQCVQAF---ET--HESDVNSVRYYPSGDAFASGSDDA-----TCRLYDLRADRE 274 (354)
T ss_dssp CCEEEEEETT-----SCEEEEETTTCCEEEEE---CC--CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEE
T ss_pred CCEEEEEeCC-----CeEEEEECCCCcEEEEe---cC--CCCCeEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcE
Confidence 4677777765 47889999887654332 11 1111222222 456777777543 588899987654
Q ss_pred EEeecCCCCCCCcceeEEEEE--CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 269 SQLDTCGQQPQGRFSHAAVVT--GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 269 ~~l~~~~~~p~~R~~hsav~~--~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
..+-. .........++.+ ++.+++.|+.+ ..+.++++.
T Consensus 275 ~~~~~---~~~~~~~~~~~~~s~~g~~l~~g~~d------~~i~vwd~~ 314 (354)
T 2pbi_B 275 VAIYS---KESIIFGASSVDFSLSGRLLFAGYND------YTINVWDVL 314 (354)
T ss_dssp EEEEC---CTTCCSCEEEEEECTTSSEEEEEETT------SCEEEEETT
T ss_pred EEEEc---CCCcccceeEEEEeCCCCEEEEEECC------CcEEEEECC
Confidence 33221 1111222233333 56677776632 356666664
No 144
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=92.20 E-value=5.4 Score=45.59 Aligned_cols=213 Identities=12% Similarity=0.082 Sum_probs=110.8
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCC---------cCcCeEEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGY---------KKVNDLHI 107 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~---------~~~ndv~~ 107 (650)
+++.++|+....+.....++++|+.++.+...... .......+..-+ +.++++..+.. .....+|+
T Consensus 173 DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~----~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~ 247 (741)
T 1yr2_A 173 DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK----WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWL 247 (741)
T ss_dssp TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE----EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEE
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC----CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEE
Confidence 45555565443333335799999999987654221 011111112224 54445444322 12467999
Q ss_pred EECCCCcE--EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC--c-eeeccccCCCCCCCC
Q 006334 108 LDLESKEW--MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM--R-WASPAVKGDIPVPRD 182 (650)
Q Consensus 108 yD~~t~~W--~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~--~-Wt~i~~~~~lP~~R~ 182 (650)
+++.+..- ..+ ......+..........+++.+++..... ....+++|++|+.+. . |..+.. .....
T Consensus 248 ~~lgt~~~~~~lv--~~~~~~~~~~~~~~~SpDG~~l~~~~~~~--~~~~~~l~~~d~~~~~~~~~~~l~~---~~~~~- 319 (741)
T 1yr2_A 248 HRLGTPQSADQPV--FATPELPKRGHGASVSSDGRWVVITSSEG--TDPVNTVHVARVTNGKIGPVTALIP---DLKAQ- 319 (741)
T ss_dssp EETTSCGGGCEEE--ECCTTCTTCEEEEEECTTSCEEEEEEECT--TCSCCEEEEEEEETTEECCCEEEEC---SSSSC-
T ss_pred EECCCCchhCEEE--eccCCCCeEEEEEEECCCCCEEEEEEEcc--CCCcceEEEEECCCCCCcccEEecC---CCCce-
Confidence 99877642 122 11122223334444445665555444321 112568999999876 6 776541 11111
Q ss_pred cceeeeecCEEEEEeccCCCCccCeEEEEECCC--CcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEE
Q 006334 183 SHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNS--LTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWI 260 (650)
Q Consensus 183 ~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t--~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~ 260 (650)
.......++.||+..... .....++++|+.+ ..|..+-.. . ... -..+...++++++....+. ...+|.
T Consensus 320 ~~~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~--~-~~~-l~~~~~~~~~lv~~~~~dg---~~~l~~ 390 (741)
T 1yr2_A 320 WDFVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPE--S-KDN-LESVGIAGNRLFASYIHDA---KSQVLA 390 (741)
T ss_dssp EEEEEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECC--C-SSE-EEEEEEEBTEEEEEEEETT---EEEEEE
T ss_pred EEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecC--C-CCe-EEEEEEECCEEEEEEEECC---EEEEEE
Confidence 111122356677765432 2346799999988 579887621 1 111 1223344778777754432 357899
Q ss_pred EECCCCcEEEe
Q 006334 261 LNVSTCSWSQL 271 (650)
Q Consensus 261 yD~~t~~W~~l 271 (650)
+|+....-..+
T Consensus 391 ~~~~g~~~~~l 401 (741)
T 1yr2_A 391 FDLDGKPAGAV 401 (741)
T ss_dssp EETTSCEEEEC
T ss_pred EeCCCCceeec
Confidence 99865544444
No 145
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=92.20 E-value=2.8 Score=43.38 Aligned_cols=199 Identities=11% Similarity=0.086 Sum_probs=96.1
Q ss_pred EEEEEccCCCCcccceEEEEECCCCcEEEeec-CCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 39 AVYIFGGCCGGLHFGDVLMLNLDTMVWSTLAT-TGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 39 ~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~-~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
.+++.|+.+ ..+.+||..+......-. .. ....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 145 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 145 NVLLSAGCD-----NVILVWDVGTGAAVLTLGPDV---HPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVV 211 (402)
T ss_dssp TEEEEEETT-----SCEEEEETTTTEEEEEECTTT---CCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEE
T ss_pred CEEEEEcCC-----CEEEEEECCCCCccEEEecCC---CCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCcee
Confidence 466666643 358899998876544321 11 11122233333 56777777654 46899999887644
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEE
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLF 194 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iy 194 (650)
..-.. ... ......+....++.+++.|.... .-..+.+||+.+..-..... .+.....-..+... ++.+|
T Consensus 212 ~~~~~-~~~-~~~~~~~~~~~~~~~l~~g~~~~----~d~~i~iwd~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 212 AEKDR-PHE-GTRPVHAVFVSEGKILTTGFSRM----SERQVALWDTKHLEEPLSLQ--ELDTSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp EEEEC-SSC-SSSCCEEEECSTTEEEEEEECTT----CCEEEEEEETTBCSSCSEEE--ECCCCSSCEEEEEETTTTEEE
T ss_pred eeecc-CCC-CCcceEEEEcCCCcEEEEeccCC----CCceEEEEcCccccCCceEE--eccCCCceeEEEEcCCCCEEE
Confidence 32101 111 11123344445788777773110 12468889987643210000 11111111222222 34566
Q ss_pred EEeccCCCCccCeEEEEECCCCc--EEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEee
Q 006334 195 VYGGDCGDQYHGDIDMLDMNSLT--WSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLD 272 (650)
Q Consensus 195 v~GG~~~~~~~n~v~~yd~~t~~--W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~ 272 (650)
+.|+.+ ..+.+||+.+.+ ...+.... ....-.+++...+..+++.+ ...+.+|++.++..+.+.
T Consensus 284 ~~g~~d-----g~i~i~d~~~~~~~~~~l~~~~---~~~~v~~~~~sp~~~~~~s~------~~~~~~~~l~~~~~~~i~ 349 (402)
T 2aq5_A 284 LCGKGD-----SSIRYFEITSEAPFLHYLSMFS---SKESQRGMGYMPKRGLEVNK------CEIARFYKLHERKCEPIA 349 (402)
T ss_dssp EEETTC-----SCEEEEEECSSTTCEEEEEEEC---CSSCCSEEEECCGGGSCGGG------TEEEEEEEEETTEEEEEE
T ss_pred EEEcCC-----CeEEEEEecCCCcceEeecccc---cCCcccceEEecccccceec------ceeEEEEEcCCCcEEEEE
Confidence 666544 378888887766 44544321 11111222332332222222 125677777776665543
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.17 E-value=11 Score=38.09 Aligned_cols=73 Identities=8% Similarity=0.110 Sum_probs=38.6
Q ss_pred EEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CC-EEEEEeccCCCcccCeEEEEEC--CCC
Q 006334 192 RLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GT-KVYIIGGVGDKHYYNDIWILNV--STC 266 (650)
Q Consensus 192 ~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~-~IyI~GG~~~~~~~~dv~~yD~--~t~ 266 (650)
.+|+.+..+ +.+.+||+.+.++..+......+........+.+ ++ .||+... . ..+.+.+|++ .+.
T Consensus 224 ~l~v~~~~~-----~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~-~---~~~~i~v~~~~~~~g 294 (361)
T 3scy_A 224 FAYLINEIG-----GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR-L---KADGVAIFKVDETNG 294 (361)
T ss_dssp EEEEEETTT-----CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC-S---SSCEEEEEEECTTTC
T ss_pred EEEEEcCCC-----CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC-C---CCCEEEEEEEcCCCC
Confidence 466665322 5788898888877666543233322222233333 34 4555432 1 0235666666 467
Q ss_pred cEEEeec
Q 006334 267 SWSQLDT 273 (650)
Q Consensus 267 ~W~~l~~ 273 (650)
+++.+..
T Consensus 295 ~~~~~~~ 301 (361)
T 3scy_A 295 TLTKVGY 301 (361)
T ss_dssp CEEEEEE
T ss_pred cEEEeeE
Confidence 7776654
No 147
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=92.13 E-value=4.6 Score=38.94 Aligned_cols=153 Identities=10% Similarity=0.083 Sum_probs=83.5
Q ss_pred EEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecC---CCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccce
Q 006334 82 SAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECR---GAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLND 157 (650)
Q Consensus 82 sa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~---~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~d 157 (650)
+++..++.+|+|=| +.+|+++.....+....+. ..+| ..--++.... ++++|+|-|. .
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp--~~iDAa~~~~~~~~iyfFkG~---------~ 89 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELP--NRIDAAYEHPSHDLIFIFRGR---------K 89 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSC--SSCCEEEEETTTTEEEEEETT---------E
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCC--CCccEEEEeccCCcEEEEccC---------E
Confidence 34557899999977 4688887655443322111 1222 2233333333 6899999774 3
Q ss_pred EEEEecCCCce---eeccccCCCCCC--CCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEE-----eee-cC
Q 006334 158 LHVLDLKTMRW---ASPAVKGDIPVP--RDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR-----LAI-IG 225 (650)
Q Consensus 158 v~~yd~~t~~W---t~i~~~~~lP~~--R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~-----i~~-~g 225 (650)
+|+|+-.+..- ..|... .+|.. ....+.... ++++|+|-| +..|+||..+.+-.. +.. -.
T Consensus 90 ~w~~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~ 161 (207)
T 1pex_A 90 FWALNGYDILEGYPKKISEL-GLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFP 161 (207)
T ss_dssp EEEESTTCCCTTCSEESTTT-TCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHST
T ss_pred EEEEeCCeeccCCceecccc-CCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCC
Confidence 78886332111 112211 23321 222222222 479999988 688999987653210 000 00
Q ss_pred CCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEE
Q 006334 226 SSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWS 269 (650)
Q Consensus 226 ~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~ 269 (650)
.+|. . -.++...++++|+|-| +..|+||..+++=.
T Consensus 162 Gip~-~-iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 162 GIGD-K-VDAVYEKNGYIYFFNG-------PIQFEYSIWSNRIV 196 (207)
T ss_dssp TSCS-C-CSEEEEETTEEEEEET-------TEEEEEETTTTEEE
T ss_pred CCCC-C-ccEEEEcCCcEEEEEC-------CEEEEEeCCccEEe
Confidence 1221 2 2344456889999976 47899998776543
No 148
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=92.12 E-value=2 Score=41.04 Aligned_cols=151 Identities=10% Similarity=0.109 Sum_probs=83.6
Q ss_pred EEEEECCEEEEEcccCCCcCcCeEEEEECCC--CcEEeeecC---CCCCCCCcccEEEEE-cCCEEEEEccccCCCCccc
Q 006334 82 SAILWGHKMIVFGGTNGYKKVNDLHILDLES--KEWMRPECR---GAPPSPRESHTATLV-GDDKMVIFGGSGEGEANYL 155 (650)
Q Consensus 82 sa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t--~~W~~l~~~---~~~P~~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~ 155 (650)
+++..++++|+|=| +.+|+++... .......++ ..+|. .--++... .++++|+|-|.
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~--~IDAa~~~~~~~~~yfFkG~-------- 73 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPR--KLDSVFEEPLSKKLFFFSGR-------- 73 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCS--SCSEEEECTTTCCEEEEETT--------
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCC--CccEEEEECCCCeEEEEeCC--------
Confidence 34557999999987 5788887755 223222121 12232 22333333 25789999774
Q ss_pred ceEEEEecCCCce-eeccccCCCCCC--CCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEE-----ee-ecCC
Q 006334 156 NDLHVLDLKTMRW-ASPAVKGDIPVP--RDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR-----LA-IIGS 226 (650)
Q Consensus 156 ~dv~~yd~~t~~W-t~i~~~~~lP~~--R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~-----i~-~~g~ 226 (650)
..|+|+..+..- ..|..- .+|.. ....++...++++|+|-| +..|+||..+.+-.. +. .-..
T Consensus 74 -~yw~~~~~~~~~Pk~i~~~-G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~G 144 (195)
T 1itv_A 74 -QVWVYTGASVLGPRRLDKL-GLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPG 144 (195)
T ss_dssp -EEEEEETTEEEEEEEGGGG-TCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTT
T ss_pred -EEEEEcCCccCCCEEeeec-ccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCC
Confidence 377887532111 112111 23321 233333333689999988 678999987654211 11 0011
Q ss_pred CCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 227 SPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 227 ~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
+| ..-.++...++.+|+|-| +..|+||..+..
T Consensus 145 vp--~~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~ 176 (195)
T 1itv_A 145 VP--LDTHDVFQFREKAYFCQD-------RFYWRVSSRSEL 176 (195)
T ss_dssp SC--SSCSEEEEETTEEEEEET-------TEEEEEECCTTC
T ss_pred CC--CCCCEEEEeCCeEEEEeC-------CEEEEEECCccE
Confidence 22 223445556789999977 478899987664
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.03 E-value=5.3 Score=45.04 Aligned_cols=153 Identities=10% Similarity=0.037 Sum_probs=73.9
Q ss_pred eEEEEECCC-CcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCC-CCC
Q 006334 104 DLHILDLES-KEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIP-VPR 181 (650)
Q Consensus 104 dv~~yD~~t-~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP-~~R 181 (650)
.++.+|+.+ .+-..+... ............ .+++.++++..+. .....+++++|+.+.+...+....... ...
T Consensus 264 ~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~-pDg~~l~~~~~~~--~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLG--KEQDIYLARVNW-RDPQHLSFQRQSR--DQKKLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEECSSTTCCCEEECCC--SCSSEEEEEEEE-EETTEEEEEEEET--TSSEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred EEEEEECCCCCceEEecCC--CCcceEEEEEEe-CCCCEEEEEEecc--cCCeEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 788999988 765554211 011222233444 5555555544322 122467999999888766543111100 000
Q ss_pred CcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEE--EEECC-EEEEEeccCCCcccCeE
Q 006334 182 DSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAA--INIGT-KVYIIGGVGDKHYYNDI 258 (650)
Q Consensus 182 ~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~--v~~~~-~IyI~GG~~~~~~~~dv 258 (650)
.......-++++++.+..++ ...+|.+|.... +..+.. . ....... ..-++ .|++.+. .+......+
T Consensus 339 ~~~~~~spdg~~~~~~~~~g---~~~l~~~~~~~~-~~~l~~---~--~~~v~~~~~~s~dg~~l~~~~~-~~~~~~~~l 408 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTG---FQHLYRIDSKGK-AAALTH---G--NWSVDELLAVDEKAGLAYFRAG-IESARESQI 408 (741)
T ss_dssp CSCCEECTTSCEEEEECTTS---SCEEEEECSSSC-EEESCC---S--SSCEEEEEEEETTTTEEEEEEC-SSCTTCBEE
T ss_pred CCceEECCCCeEEEEecCCC---ccEEEEEcCCCC-eeeeee---c--ceEEEeEeEEeCCCCEEEEEEe-CCCCceEEE
Confidence 11111122566666655433 357889987766 555541 1 1111122 23344 4555443 333234567
Q ss_pred EEEECCCCcEEEe
Q 006334 259 WILNVSTCSWSQL 271 (650)
Q Consensus 259 ~~yD~~t~~W~~l 271 (650)
|..+.....-..+
T Consensus 409 ~~~~~~g~~~~~l 421 (741)
T 2ecf_A 409 YAVPLQGGQPQRL 421 (741)
T ss_dssp EEEETTCCCCEEC
T ss_pred EEEEcCCCCeeec
Confidence 8777655444444
No 150
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=92.01 E-value=10 Score=37.77 Aligned_cols=184 Identities=13% Similarity=0.056 Sum_probs=92.3
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccC------------------CC----cCcCeEEEE
Q 006334 52 FGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTN------------------GY----KKVNDLHIL 108 (650)
Q Consensus 52 ~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~------------------~~----~~~ndv~~y 108 (650)
...+|++|..++....+... + . ....... +++.++|.... +. .....++++
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~---~--~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEA---K--N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIF 157 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE---S--E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEE
T ss_pred cceEEEEECCCCceEEEEcC---C--C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEE
Confidence 34699999998877766543 1 1 2222332 55545554422 10 113679999
Q ss_pred ECCCCcE-EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCc--c-cceEEEEecCCCceeeccccCCCCCCCCcc
Q 006334 109 DLESKEW-MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEAN--Y-LNDLHVLDLKTMRWASPAVKGDIPVPRDSH 184 (650)
Q Consensus 109 D~~t~~W-~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~--~-~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~h 184 (650)
|+.+.+. ..+.. + .........++ +++.+.... ... . ..++|.+| +..+..+... ....
T Consensus 158 d~~~~~~~~~l~~----~---~~~~~~~spdg-~~~~~~~~~-~~~~~~~~~~l~~~d--~~~~~~l~~~------~~~~ 220 (347)
T 2gop_A 158 DTESEEVIEEFEK----P---RFSSGIWHRDK-IVVNVPHRE-IIPQYFKFWDIYIWE--DGKEEKMFEK------VSFY 220 (347)
T ss_dssp ETTTTEEEEEEEE----E---TTCEEEEETTE-EEEEEECCC-SSCCSSCCEEEEEEE--TTEEEEEEEE------ESEE
T ss_pred ECCCCeEEeeecC----C---CcccccCCCCe-EEEEEeccc-ccccccccccEEEeC--CCceEEeccC------ccee
Confidence 9998887 55522 1 23344445555 555554421 111 2 45788888 6667655411 1111
Q ss_pred eeeeecCEEEEEeccCC---CCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEE
Q 006334 185 SSNVIANRLFVYGGDCG---DQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWIL 261 (650)
Q Consensus 185 s~v~~~~~Iyv~GG~~~---~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~y 261 (650)
.. .-+++.+++.+... ......++.+| +.++..+.. .. ...........+.+|+.+...+ ...+| +
T Consensus 221 ~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~---~~-~~~~~~~~~~sdg~~~~~~~~~---~~~l~-~ 289 (347)
T 2gop_A 221 AV-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD---EV-DRGVGQAKIKDGKVYFTLFEEG---SVNLY-I 289 (347)
T ss_dssp EE-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST---TC-CSEEEEEEEETTEEEEEEEETT---EEEEE-E
T ss_pred eE-CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc---cC-CcccCCccEEcCcEEEEEecCC---cEEEE-E
Confidence 22 33454444444222 12346799999 666666541 11 1111211222244666654433 34677 7
Q ss_pred ECCCCcEEEe
Q 006334 262 NVSTCSWSQL 271 (650)
Q Consensus 262 D~~t~~W~~l 271 (650)
+ +.....+
T Consensus 290 ~--~g~~~~~ 297 (347)
T 2gop_A 290 W--DGEIKPI 297 (347)
T ss_dssp E--SSSEEEE
T ss_pred c--CCceEEE
Confidence 7 4555544
No 151
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=91.99 E-value=10 Score=37.52 Aligned_cols=187 Identities=13% Similarity=0.080 Sum_probs=91.5
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEE-eecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWST-LATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~-l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
+.+++.|+.+ ..+.+||..+..... ....+. ...-.++.+. ++++++.|+.+ ..+.++|..+.+.
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~ 120 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMH---TGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQA 120 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEEEC---SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEeccc---cCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCc
Confidence 3788888754 358888887632222 111100 1111222332 56677777654 3688899988876
Q ss_pred EeeecCCCCCCCCcccEEEE--EcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeeecCEE
Q 006334 116 MRPECRGAPPSPRESHTATL--VGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRL 193 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~--~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~I 193 (650)
..+... ...-.++.. ..++.+++.|+.+ ..+.+||+.+.+-... +.......+.....+.+
T Consensus 121 ~~~~~~-----~~~v~~~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 183 (368)
T 3mmy_A 121 IQIAQH-----DAPVKTIHWIKAPNYSCVMTGSWD-------KTLKFWDTRSSNPMMV-----LQLPERCYCADVIYPMA 183 (368)
T ss_dssp EEEEEC-----SSCEEEEEEEECSSCEEEEEEETT-------SEEEEECSSCSSCSEE-----EECSSCEEEEEEETTEE
T ss_pred eeeccc-----cCceEEEEEEeCCCCCEEEEccCC-------CcEEEEECCCCcEEEE-----EecCCCceEEEecCCee
Confidence 554211 111223333 3467778888763 3588899876543221 11111222233334544
Q ss_pred EEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECC----EEEEEeccCCCcccCeEEEEECCCC
Q 006334 194 FVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGT----KVYIIGGVGDKHYYNDIWILNVSTC 266 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~----~IyI~GG~~~~~~~~dv~~yD~~t~ 266 (650)
++.++ + +.+..||.....-...... ................ ..++.|+.+ ..+.+||+...
T Consensus 184 ~~~~~-~-----~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----g~i~i~~~~~~ 248 (368)
T 3mmy_A 184 VVATA-E-----RGLIVYQLENQPSEFRRIE-SPLKHQHRCVAIFKDKQNKPTGFALGSIE-----GRVAIHYINPP 248 (368)
T ss_dssp EEEEG-G-----GCEEEEECSSSCEEEEECC-CSCSSCEEEEEEEECTTSCEEEEEEEETT-----SEEEEEESSCS
T ss_pred EEEeC-C-----CcEEEEEeccccchhhhcc-ccccCCCceEEEcccCCCCCCeEEEecCC-----CcEEEEecCCC
Confidence 44433 2 4678888776542222211 1111111122222221 336665543 35778888765
No 152
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=91.95 E-value=11 Score=37.63 Aligned_cols=191 Identities=13% Similarity=0.072 Sum_probs=99.4
Q ss_pred cccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCc
Q 006334 50 LHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRE 129 (650)
Q Consensus 50 ~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~ 129 (650)
.....+|++|..+.....+. ........-+++.++|...........+|.+|+.+.+...+... + .
T Consensus 40 ~~~~~l~~~d~~~~~~~~l~--------~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~---~--~- 105 (347)
T 2gop_A 40 KYENTIVIENLKNNARRFIE--------NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA---K--N- 105 (347)
T ss_dssp EEEEEEEEEETTTCCEEEEE--------SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE---S--E-
T ss_pred CccceEEEEeCCCCceEEcc--------cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC---C--C-
Confidence 34578999999988766551 11122222356555554432222345699999998877665221 1 1
Q ss_pred ccEEEEEcCCEEEEEccccCC----------------C----CcccceEEEEecCCCce-eeccccCCCCCCCCcceeee
Q 006334 130 SHTATLVGDDKMVIFGGSGEG----------------E----ANYLNDLHVLDLKTMRW-ASPAVKGDIPVPRDSHSSNV 188 (650)
Q Consensus 130 ~hs~~~~~~~~Lyv~GG~~~~----------------~----~~~~~dv~~yd~~t~~W-t~i~~~~~lP~~R~~hs~v~ 188 (650)
........+++.+++...... . ......++++|+.++.. ..+.. + .......
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~----~---~~~~~~~ 178 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK----P---RFSSGIW 178 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE----E---TTCEEEE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC----C---CcccccC
Confidence 222333335554444432100 0 01135789999988876 55441 1 2223333
Q ss_pred ecCEEEEEeccCCCC---c-cCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCC---CcccCeEEEE
Q 006334 189 IANRLFVYGGDCGDQ---Y-HGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGD---KHYYNDIWIL 261 (650)
Q Consensus 189 ~~~~Iyv~GG~~~~~---~-~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~---~~~~~dv~~y 261 (650)
..+.+++.+...... . ...+|.+| +.++..+... ........+++.+++.+... .....++|.+
T Consensus 179 spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-------~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~ 249 (347)
T 2gop_A 179 HRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-------VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIY 249 (347)
T ss_dssp ETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-------ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEE
T ss_pred CCCeEEEEEecccccccccccccEEEeC--CCceEEeccC-------cceeeECCCCCEEEEEEccccCCccccceEEEE
Confidence 344454444333211 2 45889999 7777776531 11222255665444444332 1234689999
Q ss_pred ECCCCcEEEee
Q 006334 262 NVSTCSWSQLD 272 (650)
Q Consensus 262 D~~t~~W~~l~ 272 (650)
| +.++..+.
T Consensus 250 d--~~~~~~l~ 258 (347)
T 2gop_A 250 D--GKEVMGIL 258 (347)
T ss_dssp C--SSCEEESS
T ss_pred C--CCceEecc
Confidence 9 66776664
No 153
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.81 E-value=21 Score=40.65 Aligned_cols=190 Identities=11% Similarity=0.037 Sum_probs=101.3
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
++.|||.. .+-+++||..+.++... .. . ....-.++...++.|||.. .+.+++||..+++++
T Consensus 73 ~g~lWigT-------~~Gl~~yd~~~~~f~~~-~~-~--~~~~i~~i~~~~g~lWigt-------~~Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 73 NTYLYMGT-------DNGILVYNYRADRYEQP-ET-D--FPTDVRTMALQGDTLWLGA-------LNGLYTYQLQSRKLT 134 (758)
T ss_dssp TTEEEEEE-------TTEEEEEETTTTEECCC-SC-C--CCSCEEEEEEETTEEEEEE-------TTEEEEEETTTCCEE
T ss_pred CCcEEEEe-------CCCeEEEeCCCCEEECc-cc-C--CCceEEEEEecCCcEEEEc-------CCcceeEeCCCCeEE
Confidence 46777733 23589999999877641 11 1 1111123334578888732 136899999998887
Q ss_pred eeecC-CCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCC-CCcceeeeec--CE
Q 006334 117 RPECR-GAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVP-RDSHSSNVIA--NR 192 (650)
Q Consensus 117 ~l~~~-~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~-R~~hs~v~~~--~~ 192 (650)
.+... ...+. ..-.++....++.|+|. .. +-+++||..++++..+......... ..-.++.... +.
T Consensus 135 ~~~~~~~~l~~-~~i~~i~~d~~g~lWig--t~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~ 204 (758)
T 3ott_A 135 SFDTRRNGLPN-NTIYSIIRTKDNQIYVG--TY-------NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQC 204 (758)
T ss_dssp EECHHHHCCSC-SCEEEEEECTTCCEEEE--ET-------TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTE
T ss_pred EeccCCCCcCC-CeEEEEEEcCCCCEEEE--eC-------CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCE
Confidence 65211 11111 11223333336778872 21 2488999988887654311110000 0111222222 34
Q ss_pred EEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCCCcEEEe
Q 006334 193 LFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQL 271 (650)
Q Consensus 193 Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l 271 (650)
|+|.. . ..+++||+.+.++..+.. ++. ..-.+++.. ++.|+|-- . .-+++||..+..+..+
T Consensus 205 lWigt--~-----~Gl~~~~~~~~~~~~~~~---l~~-~~i~~i~~d~~g~lWigT--~-----~Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 205 VWIGT--E-----GYLFQYFPSTGQIKQTEA---FHN-NSIKSLALDGNGDLLAGT--D-----NGLYVYHNDTTPLQHI 266 (758)
T ss_dssp EEEEE--E-----EEEEEEETTTTEEEEEEE---EEE-EEEEEEEECTTCCEEEEE--T-----TEEEEECCTTSCCEEE
T ss_pred EEEEE--C-----CCCeEEcCCCCeEEeccC---CCC-CeEEEEEEcCCCCEEEEe--C-----CceeEEecCCCcEEEE
Confidence 67632 1 358999999988876542 111 111222222 34666642 1 3588999998888766
Q ss_pred e
Q 006334 272 D 272 (650)
Q Consensus 272 ~ 272 (650)
.
T Consensus 267 ~ 267 (758)
T 3ott_A 267 I 267 (758)
T ss_dssp C
T ss_pred E
Confidence 4
No 154
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=91.77 E-value=8.7 Score=37.25 Aligned_cols=148 Identities=9% Similarity=0.094 Sum_probs=73.8
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
++.+++.|+.++ .+..||.... -..+ .........++....++. ++.|+.+ ..+.+||+.+.
T Consensus 154 ~~~~l~~~~~d~-----~i~i~d~~~~-~~~~----~~~~~~~i~~~~~~~~~~-~~~~~~d-------g~i~i~d~~~~ 215 (313)
T 3odt_A 154 SENKFLTASADK-----TIKLWQNDKV-IKTF----SGIHNDVVRHLAVVDDGH-FISCSND-------GLIKLVDMHTG 215 (313)
T ss_dssp TTTEEEEEETTS-----CEEEEETTEE-EEEE----CSSCSSCEEEEEEEETTE-EEEEETT-------SEEEEEETTTC
T ss_pred CCCEEEEEECCC-----CEEEEecCce-EEEE----eccCcccEEEEEEcCCCe-EEEccCC-------CeEEEEECCch
Confidence 566677776543 4777773221 1111 111222233444445667 6666653 35888998765
Q ss_pred ceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEE
Q 006334 167 RWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYI 245 (650)
Q Consensus 167 ~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI 245 (650)
+-...- . .. ...-.++....+..++.|+.+ +.+..||+.+.+....-. .+... -.+++. .+++ ++
T Consensus 216 ~~~~~~-~-~~--~~~i~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~---~~~~~-i~~~~~~~~~~-~~ 281 (313)
T 3odt_A 216 DVLRTY-E-GH--ESFVYCIKLLPNGDIVSCGED-----RTVRIWSKENGSLKQVIT---LPAIS-IWSVDCMSNGD-II 281 (313)
T ss_dssp CEEEEE-E-CC--SSCEEEEEECTTSCEEEEETT-----SEEEEECTTTCCEEEEEE---CSSSC-EEEEEECTTSC-EE
T ss_pred hhhhhh-h-cC--CceEEEEEEecCCCEEEEecC-----CEEEEEECCCCceeEEEe---ccCce-EEEEEEccCCC-EE
Confidence 432211 0 10 111122223222235566644 479999988876544331 11111 122222 2445 45
Q ss_pred EeccCCCcccCeEEEEECCCCcEEEe
Q 006334 246 IGGVGDKHYYNDIWILNVSTCSWSQL 271 (650)
Q Consensus 246 ~GG~~~~~~~~dv~~yD~~t~~W~~l 271 (650)
.|+.+ ..+.+||+.+..|...
T Consensus 282 ~~~~d-----g~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 282 VGSSD-----NLVRIFSQEKSRWASE 302 (313)
T ss_dssp EEETT-----SCEEEEESCGGGCCC-
T ss_pred EEeCC-----CcEEEEeCCCCceeeh
Confidence 56543 3689999988876543
No 155
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.77 E-value=7.9 Score=42.65 Aligned_cols=234 Identities=13% Similarity=0.137 Sum_probs=112.7
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CC-EEEEEcccCCCcCcCeEEEEEC--CC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GH-KMIVFGGTNGYKKVNDLHILDL--ES 112 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~ndv~~yD~--~t 112 (650)
++.+|+.+.. .+.+.++|..+.+....-..+. .-|.+++. ++ .||+.+ .+ +.+.+||+ .+
T Consensus 148 ~~~~~vs~~~-----d~~V~v~D~~t~~~~~~i~~g~-----~~~~v~~spdg~~l~v~~-~d-----~~V~v~D~~~~t 211 (543)
T 1nir_A 148 PNLFSVTLRD-----AGQIALVDGDSKKIVKVIDTGY-----AVHISRMSASGRYLLVIG-RD-----ARIDMIDLWAKE 211 (543)
T ss_dssp GGEEEEEEGG-----GTEEEEEETTTCCEEEEEECST-----TEEEEEECTTSCEEEEEE-TT-----SEEEEEETTSSS
T ss_pred CCEEEEEEcC-----CCeEEEEECCCceEEEEEecCc-----ccceEEECCCCCEEEEEC-CC-----CeEEEEECcCCC
Confidence 5778877653 3478899999887544332222 14555443 44 555544 32 67999999 66
Q ss_pred CcEEeeecCCCCCCCCcccEEEEEc----CCEEEEEccccCCCCcccceEEEEecCCCceee-ccccCC-------CCCC
Q 006334 113 KEWMRPECRGAPPSPRESHTATLVG----DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-PAVKGD-------IPVP 180 (650)
Q Consensus 113 ~~W~~l~~~~~~P~~R~~hs~~~~~----~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-i~~~~~-------lP~~ 180 (650)
.+-... .+....-..+++.. +++.++++.+. -+.+.++|..+.+-.. +...+. .+.+
T Consensus 212 ~~~~~~-----i~~g~~p~~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~ 280 (543)
T 1nir_A 212 PTKVAE-----IKIGIEARSVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEP 280 (543)
T ss_dssp CEEEEE-----EECCSEEEEEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCC
T ss_pred CcEEEE-----EecCCCcceEEeCCCcCCCCCEEEEEEcc------CCeEEEEeccccccceeecccCcccCccccccCC
Confidence 543221 11122223344444 56555555542 2457788877654322 111000 0111
Q ss_pred CCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCE-EEEEeccCCCcccCe
Q 006334 181 RDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTK-VYIIGGVGDKHYYND 257 (650)
Q Consensus 181 R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~-IyI~GG~~~~~~~~d 257 (650)
|....+... +..+|+.... .+.++.+|..+.+-..+... +..+.-+.++. -+++ +|+.+. ..+.
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i---~~~~~~~~~~~spdg~~l~va~~-----~~~~ 347 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSI---GAAPFLHDGGWDSSHRYFMTAAN-----NSNK 347 (543)
T ss_dssp CEEEEEECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEE---ECCSSCCCEEECTTSCEEEEEEG-----GGTE
T ss_pred ceEEEEECCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEe---ccCcCccCceECCCCCEEEEEec-----CCCe
Confidence 222222222 3445544322 26889999876432111111 11222233333 2444 554432 2357
Q ss_pred EEEEECCCCcEEEeecCCCCCCCcceeEEEEE--CCeEEEEcCCCCCCCCCCcEEEEecCC
Q 006334 258 IWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT--GSDIVIYGGCGEDERPLNELLVLQLGA 316 (650)
Q Consensus 258 v~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~--~~~lyV~GG~~~~~~~~~d~~~l~l~~ 316 (650)
+.++|+++++-...-..+..|.+..+.. ... ++.+|+.+...+ +.+.+++++.
T Consensus 348 v~v~D~~tg~l~~~i~~g~~ph~g~g~~-~~~p~~g~~~~s~~~~d-----~~V~v~d~~~ 402 (543)
T 1nir_A 348 VAVIDSKDRRLSALVDVGKTPHPGRGAN-FVHPKYGPVWSTSHLGD-----GSISLIGTDP 402 (543)
T ss_dssp EEEEETTTTEEEEEEECSSSBCCTTCEE-EEETTTEEEEEEEBSSS-----SEEEEEECCT
T ss_pred EEEEECCCCeEEEeeccCCCCCCCCCcc-cCCCCCccEEEeccCCC-----ceEEEEEeCC
Confidence 8889999987554333333343322222 223 256777654321 3466666653
No 156
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=91.76 E-value=3.4 Score=42.80 Aligned_cols=197 Identities=9% Similarity=0.045 Sum_probs=96.0
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEE-----EeecCCCCCCCCcceEEEEE-CC-EEEEEcccCCCcCcCeEEEEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWS-----TLATTGQGPGPRDSHSAILW-GH-KMIVFGGTNGYKKVNDLHILD 109 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~-----~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~ndv~~yD 109 (650)
++.+++.|+.+ ..+.+||..++.+. .+.... .....-.++.+. ++ .+++.|+.++ .+.++|
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd 160 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLE--GHTKRVGIVAWHPTAQNVLLSAGCDN-----VILVWD 160 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEE--CCSSCEEEEEECSSBTTEEEEEETTS-----CEEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEec--CCCCeEEEEEECcCCCCEEEEEcCCC-----EEEEEE
Confidence 45666667643 35888888776431 111100 001111223333 33 5777777643 588999
Q ss_pred CCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeee-
Q 006334 110 LESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNV- 188 (650)
Q Consensus 110 ~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~- 188 (650)
+.+.+....-. .......-.++....++.+++.|+.+ ..+.+||+.+.+-...-.. . ........++.
T Consensus 161 ~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~-~-~~~~~~~~~~~~ 229 (402)
T 2aq5_A 161 VGTGAAVLTLG--PDVHPDTIYSVDWSRDGALICTSCRD-------KRVRVIEPRKGTVVAEKDR-P-HEGTRPVHAVFV 229 (402)
T ss_dssp TTTTEEEEEEC--TTTCCSCEEEEEECTTSSCEEEEETT-------SEEEEEETTTTEEEEEEEC-S-SCSSSCCEEEEC
T ss_pred CCCCCccEEEe--cCCCCCceEEEEECCCCCEEEEEecC-------CcEEEEeCCCCceeeeecc-C-CCCCcceEEEEc
Confidence 98886654210 01112222334444467777777763 3688999887654321100 1 11111122222
Q ss_pred ecCEEEEEeccCCCCccCeEEEEECCCCcE--EEeeecCCCCCcccceEEEEE-CC-EEEEEeccCCCcccCeEEEEECC
Q 006334 189 IANRLFVYGGDCGDQYHGDIDMLDMNSLTW--SRLAIIGSSPGVRAGHAAINI-GT-KVYIIGGVGDKHYYNDIWILNVS 264 (650)
Q Consensus 189 ~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W--~~i~~~g~~P~~R~~~s~v~~-~~-~IyI~GG~~~~~~~~dv~~yD~~ 264 (650)
-++.+++.|... .....+.+||+.+..- .... ........+++.. ++ .+++.|+.+ ..+.+||+.
T Consensus 230 ~~~~~l~~g~~~--~~d~~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~g~~d-----g~i~i~d~~ 298 (402)
T 2aq5_A 230 SEGKILTTGFSR--MSERQVALWDTKHLEEPLSLQE----LDTSSGVLLPFFDPDTNIVYLCGKGD-----SSIRYFEIT 298 (402)
T ss_dssp STTEEEEEEECT--TCCEEEEEEETTBCSSCSEEEE----CCCCSSCEEEEEETTTTEEEEEETTC-----SCEEEEEEC
T ss_pred CCCcEEEEeccC--CCCceEEEEcCccccCCceEEe----ccCCCceeEEEEcCCCCEEEEEEcCC-----CeEEEEEec
Confidence 256777766210 1125788999876432 1111 1111112223332 33 556666433 368888888
Q ss_pred CCc
Q 006334 265 TCS 267 (650)
Q Consensus 265 t~~ 267 (650)
+..
T Consensus 299 ~~~ 301 (402)
T 2aq5_A 299 SEA 301 (402)
T ss_dssp SST
T ss_pred CCC
Confidence 765
No 157
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=91.76 E-value=8.6 Score=37.31 Aligned_cols=153 Identities=16% Similarity=0.170 Sum_probs=82.6
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEECCCC-cEEEeecCC---CCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEE
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNLDTM-VWSTLATTG---QGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLH 106 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~-sW~~l~~~g---~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~ 106 (650)
+++.+++.+|+|=| +.+|+++.... ......... ..|. ...++... .++++|+|=| +.+|
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG-------~~yW 99 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------NEYW 99 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC-------CEEE
Confidence 45567899999988 36888876542 232222211 1121 22222222 2589999987 6789
Q ss_pred EEECCCCc---EEeeecCCCCCCCCcccEEEEE-cCCEEEEEccccCCCCcccceEEEEecCCCceee-----cc-ccCC
Q 006334 107 ILDLESKE---WMRPECRGAPPSPRESHTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-----PA-VKGD 176 (650)
Q Consensus 107 ~yD~~t~~---W~~l~~~~~~P~~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-----i~-~~~~ 176 (650)
+||..+.. =+.+..-+-+.....-.++... .++++|+|-|. ..|+||..+++-.. +. .-..
T Consensus 100 ~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~---------~ywr~d~~~~~v~~gyPr~i~~~w~g 170 (218)
T 1gen_A 100 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD---------KFWRYNEVKKKMDPGFPKLIADAWNA 170 (218)
T ss_dssp EEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT---------EEEEEETTTTEECSSCCEEHHHHSSS
T ss_pred EEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC---------EEEEEECccccccCCCCcchhhccCC
Confidence 99853110 0112111111111223444443 46899999774 48899986653321 10 0012
Q ss_pred CCCCCCcceeeeec--CEEEEEeccCCCCccCeEEEEECCCCc
Q 006334 177 IPVPRDSHSSNVIA--NRLFVYGGDCGDQYHGDIDMLDMNSLT 217 (650)
Q Consensus 177 lP~~R~~hs~v~~~--~~Iyv~GG~~~~~~~n~v~~yd~~t~~ 217 (650)
+| ..-.++...+ +.+|+|-| +..|+||..+..
T Consensus 171 ~p--~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 171 IP--DNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp CC--SSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CC--CCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 22 2233444444 89999988 678999876554
No 158
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=91.72 E-value=11 Score=37.23 Aligned_cols=194 Identities=8% Similarity=0.069 Sum_probs=94.7
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcE-EEeecCCCCCCCCcceEEEEE-CC-EEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVW-STLATTGQGPGPRDSHSAILW-GH-KMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW-~~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
..||+.+... +.+++||+.++.. ......+. ...+++++. ++ .|| .+... .....+++||+.+.+
T Consensus 52 ~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~-~~~~~--~~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 52 SNVVVTSDFC-----QTLVQIETQLEPPKVVAIQEGQ----SSMADVDITPDDQFAV-TVTGL--NHPFNMQSYSFLKNK 119 (331)
T ss_dssp CEEEEEESTT-----CEEEEEECSSSSCEEEEEEECS----SCCCCEEECTTSSEEE-ECCCS--SSSCEEEEEETTTTE
T ss_pred CEEEEEeCCC-----CeEEEEECCCCceeEEecccCC----CCccceEECCCCCEEE-EecCC--CCcccEEEEECCCCC
Confidence 3577665522 3799999988774 22222211 112313333 33 455 33221 112379999999887
Q ss_pred EEeeecCCCCCCCCcccEEEEEcCCE-EEEEccccCCCCcccce-EEEEecCCCc-eeeccccCCCCCCCCcceeeee-c
Q 006334 115 WMRPECRGAPPSPRESHTATLVGDDK-MVIFGGSGEGEANYLND-LHVLDLKTMR-WASPAVKGDIPVPRDSHSSNVI-A 190 (650)
Q Consensus 115 W~~l~~~~~~P~~R~~hs~~~~~~~~-Lyv~GG~~~~~~~~~~d-v~~yd~~t~~-Wt~i~~~~~lP~~R~~hs~v~~-~ 190 (650)
....-.. ....+.+++..+++ ||+.+... +. +++|++.... ..... ...++....-..++.. +
T Consensus 120 ~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~~-------~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spd 186 (331)
T 3u4y_A 120 FISTIPI-----PYDAVGIAISPNGNGLILIDRSS-------ANTVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPD 186 (331)
T ss_dssp EEEEEEC-----CTTEEEEEECTTSSCEEEEEETT-------TTEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTT
T ss_pred eEEEEEC-----CCCccceEECCCCCEEEEEecCC-------CceEEEEEECCCCcEeecC-CccccCCCCccceEECCC
Confidence 6543111 11224555555554 66654431 23 6666654321 11100 0011111111222322 3
Q ss_pred C-EEEEEeccCCCCccCeEEEEECCCCcE----EEeeecCCCCCcccceEEEE-ECC-EEEEEeccCCCcccCeEEEEEC
Q 006334 191 N-RLFVYGGDCGDQYHGDIDMLDMNSLTW----SRLAIIGSSPGVRAGHAAIN-IGT-KVYIIGGVGDKHYYNDIWILNV 263 (650)
Q Consensus 191 ~-~Iyv~GG~~~~~~~n~v~~yd~~t~~W----~~i~~~g~~P~~R~~~s~v~-~~~-~IyI~GG~~~~~~~~dv~~yD~ 263 (650)
+ .+|+.+..+ +.+.+||+.+.+. ..+. .+ .....++. -++ .+|+... ..+.+++||+
T Consensus 187 g~~l~v~~~~~-----~~v~v~d~~~~~~~~~~~~~~-~~-----~~~~~~~~spdg~~l~v~~~-----~~~~i~~~d~ 250 (331)
T 3u4y_A 187 GNFAFVANLIG-----NSIGILETQNPENITLLNAVG-TN-----NLPGTIVVSRDGSTVYVLTE-----STVDVFNFNQ 250 (331)
T ss_dssp SSEEEEEETTT-----TEEEEEECSSTTSCEEEEEEE-CS-----SCCCCEEECTTSSEEEEECS-----SEEEEEEEET
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcccceeeecc-CC-----CCCceEEECCCCCEEEEEEc-----CCCEEEEEEC
Confidence 4 477765432 5799999987764 2232 11 11122223 234 4666633 1245999999
Q ss_pred CCCcEEEee
Q 006334 264 STCSWSQLD 272 (650)
Q Consensus 264 ~t~~W~~l~ 272 (650)
++.+...+.
T Consensus 251 ~~~~~~~~~ 259 (331)
T 3u4y_A 251 LSGTLSFVK 259 (331)
T ss_dssp TTTEEEEEE
T ss_pred CCCceeeec
Confidence 998875554
No 159
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=91.68 E-value=10 Score=36.69 Aligned_cols=225 Identities=10% Similarity=-0.027 Sum_probs=116.8
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.||+.... .+.+.+||+. ..+..+..... ...-+++++. ++.+|+.... .+.+++||+. .++
T Consensus 30 ~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 30 DGKVWFTQHK-----ANKISSLDQS-GRIKEFEVPTP---DAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-GGF 94 (300)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCE
T ss_pred CCCEEEEcCC-----CCeEEEECCC-CceEEEECCCC---CCcceeEEECCCCCEEEEecC-----CCeEEEECCC-CCe
Confidence 4788885432 2468999988 77766543211 1222344443 5778886422 2468999988 777
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeee-ecCEEE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNV-IANRLF 194 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~-~~~~Iy 194 (650)
..+.... ....-+.++...++.+|+.... .+.+++||++ .+......... ...-+.++. -++++|
T Consensus 95 ~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~-g~~~~~~~~~~---~~~~~~i~~d~~g~l~ 160 (300)
T 2qc5_A 95 TEYPLPQ---PDSGPYGITEGLNGDIWFTQLN-------GDRIGKLTAD-GTIYEYDLPNK---GSYPAFITLGSDNALW 160 (300)
T ss_dssp EEEECSS---TTCCEEEEEECSTTCEEEEETT-------TTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTSSEE
T ss_pred EEecCCC---CCCCCccceECCCCCEEEEccC-------CCeEEEECCC-CCEEEccCCCC---CCCceeEEECCCCCEE
Confidence 6542211 1122334444446788876432 1358889887 55553321111 111122332 246788
Q ss_pred EEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCCCcEEEeec
Q 006334 195 VYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDT 273 (650)
Q Consensus 195 v~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~ 273 (650)
+.... .+.+++||+ +.++..+..... ...-..++.. ++.||+.... ...+++||+ +..+..+..
T Consensus 161 v~~~~-----~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~ 225 (300)
T 2qc5_A 161 FTENQ-----NNSIGRITN-TGKLEEYPLPTN---AAAPVGITSGNDGALWFVEIM-----GNKIGRITT-TGEISEYDI 225 (300)
T ss_dssp EEETT-----TTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC
T ss_pred EEecC-----CCeEEEECC-CCcEEEeeCCCC---CCCcceEEECCCCCEEEEccC-----CCEEEEEcC-CCcEEEEEC
Confidence 76432 247999998 666766542111 1112223332 4578876421 246899998 666666542
Q ss_pred CCCCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEec
Q 006334 274 CGQQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQL 314 (650)
Q Consensus 274 ~~~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l 314 (650)
... ...-.++++. ++.|||.... .+.+.+++.
T Consensus 226 ~~~---~~~~~~i~~d~~g~l~v~~~~------~~~i~~~~~ 258 (300)
T 2qc5_A 226 PTP---NARPHAITAGKNSEIWFTEWG------ANQIGRITN 258 (300)
T ss_dssp SST---TCCEEEEEECSTTCEEEEETT------TTEEEEECT
T ss_pred CCC---CCCceEEEECCCCCEEEeccC------CCeEEEECC
Confidence 111 1111233333 4678777421 134566654
No 160
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=91.55 E-value=16 Score=40.87 Aligned_cols=126 Identities=16% Similarity=0.226 Sum_probs=66.8
Q ss_pred EEEEECCEEEEEcccCCCcCcCeEEEEEC-CCC--cEEeeecCCC--CCCCC---cccEEEEE-cCCE----EEEEcccc
Q 006334 82 SAILWGHKMIVFGGTNGYKKVNDLHILDL-ESK--EWMRPECRGA--PPSPR---ESHTATLV-GDDK----MVIFGGSG 148 (650)
Q Consensus 82 sa~~~~~~lyVfGG~~~~~~~ndv~~yD~-~t~--~W~~l~~~~~--~P~~R---~~hs~~~~-~~~~----Lyv~GG~~ 148 (650)
+-++.++.||+...+ .+.++.||. .+. .|+.-..... .+..+ ...+.++. .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-- 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-- 129 (599)
T ss_dssp CCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT--
T ss_pred ccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC--
Confidence 335679999997652 246999999 776 4876311000 00001 01122331 3455 766422
Q ss_pred CCCCcccceEEEEecCCC--ceeeccccCCCCCC-CCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCc--EEEee
Q 006334 149 EGEANYLNDLHVLDLKTM--RWASPAVKGDIPVP-RDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLT--WSRLA 222 (650)
Q Consensus 149 ~~~~~~~~dv~~yd~~t~--~Wt~i~~~~~lP~~-R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~--W~~i~ 222 (650)
-..++.+|..+. .|+.-. ...... ....+.++.++.||+-.+.........++.||..+.+ |+.-.
T Consensus 130 ------dg~l~AlDa~TG~~~W~~~~--~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 ------DGNVAALNAETGETVWKVEN--SDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp ------TSEEEEEETTTCCEEEEEEC--CCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ------CCEEEEEECCCCCEEEeecC--CCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 135889998776 487421 110000 1122334567888764432111234689999998765 87644
No 161
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=91.55 E-value=11 Score=37.09 Aligned_cols=193 Identities=10% Similarity=0.063 Sum_probs=96.8
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CC-EEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GH-KMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~-~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
.+.+|+.... .+.+.+||+.+++.......+. ... .+++. ++ .+|+.+..+ +.++++|+.+.+
T Consensus 9 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~----~~~-~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~ 73 (331)
T 3u4y_A 9 SNFGIVVEQH-----LRRISFFSTDTLEILNQITLGY----DFV-DTAITSDCSNVVVTSDFC-----QTLVQIETQLEP 73 (331)
T ss_dssp CCEEEEEEGG-----GTEEEEEETTTCCEEEEEECCC----CEE-EEEECSSSCEEEEEESTT-----CEEEEEECSSSS
T ss_pred CCEEEEEecC-----CCeEEEEeCcccceeeeEEccC----Ccc-eEEEcCCCCEEEEEeCCC-----CeEEEEECCCCc
Confidence 4677877663 3579999999988866544321 111 33332 44 477665422 389999998887
Q ss_pred E-EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cC-
Q 006334 115 W-MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-AN- 191 (650)
Q Consensus 115 W-~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~- 191 (650)
. ........ ...+++++..+++.++.+... .....+++||+.+.+..... +.....+.++.. ++
T Consensus 74 ~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~----~~~~~i~v~d~~~~~~~~~~-----~~~~~~~~~~~spdg~ 140 (331)
T 3u4y_A 74 PKVVAIQEGQ----SSMADVDITPDDQFAVTVTGL----NHPFNMQSYSFLKNKFISTI-----PIPYDAVGIAISPNGN 140 (331)
T ss_dssp CEEEEEEECS----SCCCCEEECTTSSEEEECCCS----SSSCEEEEEETTTTEEEEEE-----ECCTTEEEEEECTTSS
T ss_pred eeEEecccCC----CCccceEECCCCCEEEEecCC----CCcccEEEEECCCCCeEEEE-----ECCCCccceEECCCCC
Confidence 5 22211111 112323444444433333221 01137999999887654422 111112333333 33
Q ss_pred EEEEEeccCCCCccCe-EEEEECCCCc-EEEeeecCCCCCcccceEEEEE-CC-EEEEEeccCCCcccCeEEEEECCCCc
Q 006334 192 RLFVYGGDCGDQYHGD-IDMLDMNSLT-WSRLAIIGSSPGVRAGHAAINI-GT-KVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 192 ~Iyv~GG~~~~~~~n~-v~~yd~~t~~-W~~i~~~g~~P~~R~~~s~v~~-~~-~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
.+|+.+... +. +.+|++.... ....... ..+.......++.. ++ .+|+.+.. .+.+++||+.+.+
T Consensus 141 ~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~spdg~~l~v~~~~-----~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 141 GLILIDRSS-----ANTVRRFKIDADGVLFDTGQE-FISGGTRPFNITFTPDGNFAFVANLI-----GNSIGILETQNPE 209 (331)
T ss_dssp CEEEEEETT-----TTEEEEEEECTTCCEEEEEEE-EECSSSSEEEEEECTTSSEEEEEETT-----TTEEEEEECSSTT
T ss_pred EEEEEecCC-----CceEEEEEECCCCcEeecCCc-cccCCCCccceEECCCCCEEEEEeCC-----CCeEEEEECCCCc
Confidence 577765532 34 6677655322 1111000 01111112233332 34 47776532 3479999998876
Q ss_pred E
Q 006334 268 W 268 (650)
Q Consensus 268 W 268 (650)
.
T Consensus 210 ~ 210 (331)
T 3u4y_A 210 N 210 (331)
T ss_dssp S
T ss_pred c
Confidence 4
No 162
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=91.24 E-value=11 Score=36.48 Aligned_cols=189 Identities=9% Similarity=0.058 Sum_probs=97.6
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.||+.+.. ..+.+++||........+... ....-+.+++. ++++||.... .+.+++||+.....
T Consensus 88 ~g~l~v~~~~----~~~~i~~~d~~g~~~~~~~~~----~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~ 154 (286)
T 1q7f_A 88 SGDIIVTERS----PTHQIQIYNQYGQFVRKFGAT----ILQHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVL 154 (286)
T ss_dssp TTEEEEEECG----GGCEEEEECTTSCEEEEECTT----TCSCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEE
T ss_pred CCeEEEEcCC----CCCEEEEECCCCcEEEEecCc----cCCCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEE
Confidence 5788887632 124688999654433333221 11122344443 5788886532 25789999766544
Q ss_pred EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEE
Q 006334 116 MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLF 194 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iy 194 (650)
..+...... ..-..+++..++.||+.... .+.+++||........+...+.+..+ ..++.. ++.+|
T Consensus 155 ~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~-------~~~i~~~~~~g~~~~~~~~~g~~~~p---~~i~~d~~G~l~ 221 (286)
T 1q7f_A 155 HKFGCSKHL---EFPNGVVVNDKQEIFISDNR-------AHCVKVFNYEGQYLRQIGGEGITNYP---IGVGINSNGEIL 221 (286)
T ss_dssp EEEECTTTC---SSEEEEEECSSSEEEEEEGG-------GTEEEEEETTCCEEEEESCTTTSCSE---EEEEECTTCCEE
T ss_pred EEeCCCCcc---CCcEEEEECCCCCEEEEECC-------CCEEEEEcCCCCEEEEEccCCccCCC---cEEEECCCCCEE
Confidence 443211111 12234444456888886543 24689999865544433311111111 222222 46788
Q ss_pred EEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCcccCeEEEEECC
Q 006334 195 VYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKHYYNDIWILNVS 264 (650)
Q Consensus 195 v~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD~~ 264 (650)
+....++ ..+.+||.+...-..+..... ... ..+++. -++++|+.. . .+.+.+|++.
T Consensus 222 v~~~~~~----~~i~~~~~~g~~~~~~~~~~~--~~~-~~~i~~~~~g~l~vs~-~-----~~~v~v~~~~ 279 (286)
T 1q7f_A 222 IADNHNN----FNLTIFTQDGQLISALESKVK--HAQ-CFDVALMDDGSVVLAS-K-----DYRLYIYRYV 279 (286)
T ss_dssp EEECSSS----CEEEEECTTSCEEEEEEESSC--CSC-EEEEEEETTTEEEEEE-T-----TTEEEEEECS
T ss_pred EEeCCCC----EEEEEECCCCCEEEEEcccCC--CCc-ceeEEECCCCcEEEEC-C-----CCeEEEEEcc
Confidence 8764321 278999977655455543211 111 123333 357888873 2 1467777654
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=91.23 E-value=4.5 Score=40.20 Aligned_cols=114 Identities=21% Similarity=0.270 Sum_probs=54.5
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCC--CCcceEEEEE-CCEEEEEcccC----CCc---CcCeEEE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPG--PRDSHSAILW-GHKMIVFGGTN----GYK---KVNDLHI 107 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~--pR~~hsa~~~-~~~lyVfGG~~----~~~---~~ndv~~ 107 (650)
+.+|+.+.. ...+++||+.+++.......+..+. ...-+.+++. +++.+++++.. ... ..+.+++
T Consensus 55 ~~~~v~~~~-----~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~ 129 (349)
T 1jmx_B 55 RTAYVLNNH-----YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV 129 (349)
T ss_dssp SEEEEEETT-----TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred CEEEEEeCC-----CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEE
Confidence 367776542 2579999999876554322211110 1112233333 45433334321 000 1268999
Q ss_pred EECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCce
Q 006334 108 LDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRW 168 (650)
Q Consensus 108 yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~W 168 (650)
||+.+.+-.+... ....++.-.++....++++|+.++ ++++||+.+.+.
T Consensus 130 ~d~~~~~~~~~~~--~~~~~~~~~~~~~s~dg~l~~~~~----------~i~~~d~~~~~~ 178 (349)
T 1jmx_B 130 FSTADGLEAKPVR--TFPMPRQVYLMRAADDGSLYVAGP----------DIYKMDVKTGKY 178 (349)
T ss_dssp EEGGGGGGBCCSE--EEECCSSCCCEEECTTSCEEEESS----------SEEEECTTTCCE
T ss_pred EECCCccccceee--eccCCCcccceeECCCCcEEEccC----------cEEEEeCCCCce
Confidence 9988743211100 001122233444445667766322 277888776553
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=91.20 E-value=14 Score=37.26 Aligned_cols=235 Identities=12% Similarity=0.053 Sum_probs=119.8
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCc--EEeeecC---CCCCC
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKE--WMRPECR---GAPPS 126 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~--W~~l~~~---~~~P~ 126 (650)
+.++++|+.+.+.......+. -..-+.+++. +++|||.... .+.+++||+.... -..+... +....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~---~~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~ 140 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNL---FYLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQN 140 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTT---CSSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTT
T ss_pred CcEEEEECCCCeEEeccCCCc---cCCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCcc
Confidence 469999998877654322211 1122344443 6778887543 3578999987652 2222110 00011
Q ss_pred CCccc-EEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCC----CCCCC-cceeeee-c-CEEEEEe
Q 006334 127 PRESH-TATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDI----PVPRD-SHSSNVI-A-NRLFVYG 197 (650)
Q Consensus 127 ~R~~h-s~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~l----P~~R~-~hs~v~~-~-~~Iyv~G 197 (650)
..... .+++.. ++.||+..++. .+.+.+||.+......+...+.- +.... -+.++.. + +.||+..
T Consensus 141 ~~~~P~~ia~~~~~g~lyv~d~~~------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d 214 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTGAVFVSDGYC------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD 214 (329)
T ss_dssp CCSSEEEEEECTTTCCEEEEECSS------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE
T ss_pred ccCCCcEEEEeCCCCeEEEEeCCC------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE
Confidence 11223 333333 68899987531 24688898654333322211111 11111 1233332 3 7899886
Q ss_pred ccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCC--CcccCeEEEEECCCCcEEEeecCC
Q 006334 198 GDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGD--KHYYNDIWILNVSTCSWSQLDTCG 275 (650)
Q Consensus 198 G~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~--~~~~~dv~~yD~~t~~W~~l~~~~ 275 (650)
..+ +.+.+||+.+.+....-. .......-.+++...+.+|...|... ......+++||+.+.+....-...
T Consensus 215 ~~~-----~~I~~~~~~~G~~~~~~~--~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~ 287 (329)
T 3fvz_A 215 REN-----GRIQCFKTDTKEFVREIK--HASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV 287 (329)
T ss_dssp TTT-----TEEEEEETTTCCEEEEEC--CTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCS
T ss_pred CCC-----CEEEEEECCCCcEEEEEe--ccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCC
Confidence 533 579999998666554321 11111222234444477777766421 233457999999888765542100
Q ss_pred CCCCCcceeEEEEE-CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 276 QQPQGRFSHAAVVT-GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 276 ~~p~~R~~hsav~~-~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
......-+++++. ++.|||.... .+.++++++.
T Consensus 288 -~~~~~~p~~ia~~~dG~lyvad~~------~~~I~~~~~~ 321 (329)
T 3fvz_A 288 -RKHFDMPHDIVASEDGTVYIGDAH------TNTVWKFTLT 321 (329)
T ss_dssp -SSCCSSEEEEEECTTSEEEEEESS------SCCEEEEEEE
T ss_pred -CCccCCeeEEEECCCCCEEEEECC------CCEEEEEeCC
Confidence 0111222344443 4678888543 2467777764
No 165
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=91.13 E-value=14 Score=37.43 Aligned_cols=240 Identities=9% Similarity=0.060 Sum_probs=121.6
Q ss_pred CCCeEEeeecCCCCCCCcceeEEEEE-CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCE
Q 006334 11 RAAMWLYPKVLGFNPPERWGHSACYS-HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHK 89 (650)
Q Consensus 11 ~~~~W~~~~~~g~~P~~R~ghs~v~~-~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~ 89 (650)
....|...... ....-.++.+. .+.+|+.|-. ..+++.+-...+|+.+......+ .....++.+.++.
T Consensus 23 ~g~~W~~~~~~----~~~~~~~v~~~~~~~~~~~G~~------g~i~~s~DgG~tW~~~~~~~~~~-~~~~~~i~~~~~~ 91 (327)
T 2xbg_A 23 DYNPWEAIQLP----TTATILDMSFIDRHHGWLVGVN------ATLMETRDGGQTWEPRTLVLDHS-DYRFNSVSFQGNE 91 (327)
T ss_dssp SSCCEEEEECS----CSSCEEEEEESSSSCEEEEETT------TEEEEESSTTSSCEECCCCCSCC-CCEEEEEEEETTE
T ss_pred CCCCceEeecC----CCCcEEEEEECCCCcEEEEcCC------CeEEEeCCCCCCCeECCCCCCCC-CccEEEEEecCCe
Confidence 34679876532 22223333343 4677886531 23665555556899985432111 2233445556788
Q ss_pred EEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCcee
Q 006334 90 MIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWA 169 (650)
Q Consensus 90 lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt 169 (650)
+|+.|-. ..+++-+=.-.+|+.+......|. ....++...++.+|+.|... .+++-+-.-.+|+
T Consensus 92 ~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~g--------~v~~S~DgG~tW~ 155 (327)
T 2xbg_A 92 GWIVGEP------PIMLHTTDGGQSWSQIPLDPKLPG--SPRLIKALGNGSAEMITNVG--------AIYRTKDSGKNWQ 155 (327)
T ss_dssp EEEEEET------TEEEEESSTTSSCEECCCCTTCSS--CEEEEEEEETTEEEEEETTC--------CEEEESSTTSSEE
T ss_pred EEEEECC------CeEEEECCCCCCceECccccCCCC--CeEEEEEECCCCEEEEeCCc--------cEEEEcCCCCCCE
Confidence 8887532 234443223468999743211221 12344444568888876421 2444332356899
Q ss_pred eccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECC-CCcEEEeeecCCCCCcccceEEEE-ECCEEEEE
Q 006334 170 SPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMN-SLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYII 246 (650)
Q Consensus 170 ~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~-t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~ 246 (650)
.+.. +.....+.++.. ++.+|++|- . ..+++-+-. ..+|+.+.. +.....+.++. .++++|+.
T Consensus 156 ~~~~----~~~~~~~~~~~~~~~~~~~~g~-~-----G~~~~S~d~gG~tW~~~~~----~~~~~~~~~~~~~~g~~~~~ 221 (327)
T 2xbg_A 156 ALVQ----EAIGVMRNLNRSPSGEYVAVSS-R-----GSFYSTWEPGQTAWEPHNR----TTSRRLHNMGFTPDGRLWMI 221 (327)
T ss_dssp EEEC----SCCCCEEEEEECTTSCEEEEET-T-----SSEEEEECTTCSSCEEEEC----CSSSCEEEEEECTTSCEEEE
T ss_pred Eeec----CCCcceEEEEEcCCCcEEEEEC-C-----CcEEEEeCCCCCceeECCC----CCCCccceeEECCCCCEEEE
Confidence 8652 112223333333 456666653 2 245555433 578999862 22333444444 34678877
Q ss_pred eccCCCcccCeEEEEECC-CCcEEEeecCCCCCCCcceeEEEEE-CCeEEEEcC
Q 006334 247 GGVGDKHYYNDIWILNVS-TCSWSQLDTCGQQPQGRFSHAAVVT-GSDIVIYGG 298 (650)
Q Consensus 247 GG~~~~~~~~dv~~yD~~-t~~W~~l~~~~~~p~~R~~hsav~~-~~~lyV~GG 298 (650)
+.. ..+++.+.. -.+|+.+... .++.....+.++.. ++.+|+.|+
T Consensus 222 ~~~------G~~~~s~~D~G~tW~~~~~~-~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 222 VNG------GKIAFSDPDNSENWGELLSP-LRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp ETT------TEEEEEETTEEEEECCCBCT-TSSCCSCEEEEEESSSSCEEEEES
T ss_pred eCC------ceEEEecCCCCCeeEeccCC-cccCCcceEEEEecCCCEEEEEeC
Confidence 531 135554333 5689877531 12222222333333 567888876
No 166
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=91.06 E-value=0.91 Score=46.40 Aligned_cols=152 Identities=8% Similarity=0.087 Sum_probs=71.4
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
++++++.|+.++ .+.+||+.+..|..+..-.. ....-.++....++.+++.|+.+ ..+.+||+.+.
T Consensus 22 ~g~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~d-------~~v~vwd~~~~ 87 (377)
T 3dwl_C 22 QRTEFVTTTATN-----QVELYEQDGNGWKHARTFSD--HDKIVTCVDWAPKSNRIVTCSQD-------RNAYVYEKRPD 87 (377)
T ss_dssp SSSEEECCCSSS-----CBCEEEEETTEEEECCCBCC--CSSCEEEEEECTTTCCEEEEETT-------SSEEEC-----
T ss_pred CCCEEEEecCCC-----EEEEEEccCCceEEEEEEec--CCceEEEEEEeCCCCEEEEEeCC-------CeEEEEEcCCC
Confidence 566777776543 46677888887766522111 11112333334466777887763 24888888877
Q ss_pred c-eeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCeEEEEECCCCc-EEEeeecCCCCCcccceEEEEE-CC
Q 006334 167 R-WASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLT-WSRLAIIGSSPGVRAGHAAINI-GT 241 (650)
Q Consensus 167 ~-Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~-W~~i~~~g~~P~~R~~~s~v~~-~~ 241 (650)
. |..... +.........+.+ ++.+++.|+.+ ..+..||+.+.+ |..+..... +....-.+++.. ++
T Consensus 88 ~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~ 158 (377)
T 3dwl_C 88 GTWKQTLV---LLRLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKR-PLRSTILSLDWHPNN 158 (377)
T ss_dssp -CCCCEEE---CCCCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECS-SCCSCEEEEEECTTS
T ss_pred CceeeeeE---ecccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeec-ccCCCeEEEEEcCCC
Confidence 6 543321 1111111122222 45667777754 357788877654 332221111 111112222222 45
Q ss_pred EEEEEeccCCCcccCeEEEEECCCC
Q 006334 242 KVYIIGGVGDKHYYNDIWILNVSTC 266 (650)
Q Consensus 242 ~IyI~GG~~~~~~~~dv~~yD~~t~ 266 (650)
++++.|+.+ ..+.+||+.+.
T Consensus 159 ~~l~~~~~d-----~~i~iwd~~~~ 178 (377)
T 3dwl_C 159 VLLAAGCAD-----RKAYVLSAYVR 178 (377)
T ss_dssp SEEEEEESS-----SCEEEEEECCS
T ss_pred CEEEEEeCC-----CEEEEEEEEec
Confidence 677777654 35788887643
No 167
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=91.04 E-value=10 Score=37.38 Aligned_cols=109 Identities=9% Similarity=0.097 Sum_probs=53.6
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE---CCEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW---GHKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~---~~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
++..++.|+.++ .+.+||..+.....+..... ....-.++.+. ++.+++.|+.++ .+.++|+.+.
T Consensus 20 ~g~~las~s~D~-----~v~iw~~~~~~~~~~~~l~g--H~~~V~~v~~s~~~~g~~l~s~s~D~-----~v~iWd~~~~ 87 (297)
T 2pm7_B 20 YGKRMATCSSDK-----TIKIFEVEGETHKLIDTLTG--HEGPVWRVDWAHPKFGTILASCSYDG-----KVMIWKEENG 87 (297)
T ss_dssp TSSEEEEEETTS-----CEEEEEBCSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEEEETTT-----EEEEEEBSSS
T ss_pred CCCEEEEEeCCC-----EEEEEecCCCCcEEEEEEcc--ccCCeEEEEecCCCcCCEEEEEcCCC-----EEEEEEcCCC
Confidence 456677777543 57778876543322211100 01111223332 256777777643 5778888887
Q ss_pred cEEeeecCCCCCCCCcccEEEEEcC--CEEEEEccccCCCCcccceEEEEecCCC
Q 006334 114 EWMRPECRGAPPSPRESHTATLVGD--DKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 114 ~W~~l~~~~~~P~~R~~hs~~~~~~--~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
.|..+...... ...-.++....+ +.+++.|+.+ ..+.+||+.+.
T Consensus 88 ~~~~~~~~~~h--~~~v~~v~~~p~~~g~~l~s~s~d-------~~v~~wd~~~~ 133 (297)
T 2pm7_B 88 RWSQIAVHAVH--SASVNSVQWAPHEYGPMLLVASSD-------GKVSVVEFKEN 133 (297)
T ss_dssp CBCCCEEECCC--SSCEEEEEECCGGGCSEEEEEETT-------SEEEEEEBCSS
T ss_pred ceEEEEEeecC--CCceeEEEeCcCCCCcEEEEEECC-------CcEEEEEecCC
Confidence 77543211111 111112222222 4567777763 35777887654
No 168
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=90.86 E-value=25 Score=39.73 Aligned_cols=124 Identities=17% Similarity=0.247 Sum_probs=68.8
Q ss_pred eEEEEECCEEEEEccCCCCcccceEEEEECCCCc--EEEeecCCCC-----CCCCcceEEEEECCEEEEEcccCCCcCcC
Q 006334 31 HSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMV--WSTLATTGQG-----PGPRDSHSAILWGHKMIVFGGTNGYKKVN 103 (650)
Q Consensus 31 hs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~s--W~~l~~~g~~-----P~pR~~hsa~~~~~~lyVfGG~~~~~~~n 103 (650)
.+.++.++.||+... .+.++.+|..+++ |+.-...... .......+.++.+++||+... ..
T Consensus 60 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg 127 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DG 127 (668)
T ss_dssp CCCEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TS
T ss_pred cCCEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CC
Confidence 344678999999765 2469999987664 8764322100 000112334567888887532 24
Q ss_pred eEEEEECCCCc--EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC--ceee
Q 006334 104 DLHILDLESKE--WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM--RWAS 170 (650)
Q Consensus 104 dv~~yD~~t~~--W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~--~Wt~ 170 (650)
.++.+|..+.+ |+.-... ....-....+.++. ++.+|+-.+.. .......++.||..+. .|+.
T Consensus 128 ~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~P~v~-~~~v~vg~~~~--~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 128 RLIALDAKTGKAIWSQQTTD-PAKPYSITGAPRVV-KGKVIIGNGGA--EYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EEEEEETTTCCEEEEEECSC-TTSSCBCCSCCEEE-TTEEEECCBCT--TTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCEeeeeccCC-CCCcceecCCCEEE-CCEEEEeCCCC--CcCCCCEEEEEECCCCcEEEEe
Confidence 69999998874 8763111 11111111222333 67777633221 1123457999999876 4875
No 169
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=90.74 E-value=14 Score=37.55 Aligned_cols=236 Identities=12% Similarity=0.105 Sum_probs=110.7
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCC--cEEEeecCCCCCCCCcceEEEEE-C-CEEEEEcccCCCcCcCeEEEEECCC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTM--VWSTLATTGQGPGPRDSHSAILW-G-HKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~--sW~~l~~~g~~P~pR~~hsa~~~-~-~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
++.+++.|+.+ ..+.+||..+. ....+..... ....-.++.+. + +.+++.|+.++ .+.+||+.+
T Consensus 78 ~~~~l~~~~~d-----g~v~vw~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~ 145 (416)
T 2pm9_A 78 NNKIIAGALDN-----GSLELYSTNEANNAINSMARFSN--HSSSVKTVKFNAKQDNVLASGGNNG-----EIFIWDMNK 145 (416)
T ss_dssp SSSCEEEEESS-----SCEEEECCSSTTSCCCEEEECCC--SSSCCCEEEECSSSTTBEEEECSSS-----CEEBCBTTT
T ss_pred CCCeEEEEccC-----CeEEEeecccccccccchhhccC--CccceEEEEEcCCCCCEEEEEcCCC-----eEEEEECCC
Confidence 45666666643 35788888761 1112211100 01112233333 3 66777777543 577888876
Q ss_pred Cc------EEeeecCCCCCCCCcccEEEEEcC-CEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCC-----C
Q 006334 113 KE------WMRPECRGAPPSPRESHTATLVGD-DKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPV-----P 180 (650)
Q Consensus 113 ~~------W~~l~~~~~~P~~R~~hs~~~~~~-~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~-----~ 180 (650)
.. -... ..........-.++....+ +.+++.|+.+ ..+.+||+.+.+....- ..+. .
T Consensus 146 ~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~v~iwd~~~~~~~~~~---~~~~~~~~~~ 214 (416)
T 2pm9_A 146 CTESPSNYTPLT-PGQSMSSVDEVISLAWNQSLAHVFASAGSS-------NFASIWDLKAKKEVIHL---SYTSPNSGIK 214 (416)
T ss_dssp TSSCTTTCCCBC-CCCSCCSSCCCCEEEECSSCTTEEEEESSS-------SCEEEEETTTTEEEEEE---CCCCCSSCCC
T ss_pred Cccccccccccc-cccccCCCCCeeEEEeCCCCCcEEEEEcCC-------CCEEEEECCCCCcceEE---eccccccccC
Confidence 64 1110 0000111122233444444 5677777763 35889998876544321 1111 1
Q ss_pred CCcceeeee-c-CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCC-CcccceEEEEE---CCEEEEEeccCCCcc
Q 006334 181 RDSHSSNVI-A-NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSP-GVRAGHAAINI---GTKVYIIGGVGDKHY 254 (650)
Q Consensus 181 R~~hs~v~~-~-~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P-~~R~~~s~v~~---~~~IyI~GG~~~~~~ 254 (650)
..-.++... + ..+++.|+.++. ...+.+||+.+..-. +. ... ........+.+ ++.+++.|+.+
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~~~~-~~---~~~~~~~~~v~~~~~s~~~~~~l~s~~~d---- 284 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNANTP-LQ---TLNQGHQKGILSLDWCHQDEHLLLSSGRD---- 284 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTSTTSC-SB---CCCSCCSSCEEEEEECSSCSSCEEEEESS----
T ss_pred CceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCCCCC-cE---EeecCccCceeEEEeCCCCCCeEEEEeCC----
Confidence 111222222 2 357777765421 126788888764311 11 111 11112222222 56777777653
Q ss_pred cCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CC-eEEEEcCCCCCCCCCCcEEEEecCC
Q 006334 255 YNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT-GS-DIVIYGGCGEDERPLNELLVLQLGA 316 (650)
Q Consensus 255 ~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~-~~-~lyV~GG~~~~~~~~~d~~~l~l~~ 316 (650)
..+.+||+.+.+-...-.. ..... .++.+. ++ .+++.|+.+ ..+.++++..
T Consensus 285 -g~v~~wd~~~~~~~~~~~~---~~~~v-~~~~~s~~~~~~l~s~~~d------~~i~iw~~~~ 337 (416)
T 2pm9_A 285 -NTVLLWNPESAEQLSQFPA---RGNWC-FKTKFAPEAPDLFACASFD------NKIEVQTLQN 337 (416)
T ss_dssp -SEEEEECSSSCCEEEEEEC---SSSCC-CCEEECTTCTTEEEECCSS------SEEEEEESCC
T ss_pred -CCEEEeeCCCCccceeecC---CCCce-EEEEECCCCCCEEEEEecC------CcEEEEEccC
Confidence 3588999887654332110 11111 123333 34 678887753 3466666653
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=90.71 E-value=2.6 Score=43.06 Aligned_cols=202 Identities=10% Similarity=0.026 Sum_probs=97.5
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCC-CcCcCeEEEEECCCCcEEeeecCCCCCCCCcc
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNG-YKKVNDLHILDLESKEWMRPECRGAPPSPRES 130 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~-~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~ 130 (650)
..++++|+.+..-..+.... ....+....- +++.++|..... ......+|.+|..+.....+. ........
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~---~~~~~~~~ 240 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQEN----QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK---THAEGESC 240 (388)
T ss_dssp EEEEEEETTTCCEEEEEEES----SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC---CCCTTEEE
T ss_pred ceEEEEECCCCceEEeecCC----ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee---eCCCCccc
Confidence 57999999988766664331 2333444444 566555544322 223568999999887766652 11111111
Q ss_pred cEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCC------CCcceeeeecCEEEEEecc---CC
Q 006334 131 HTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVP------RDSHSSNVIANRLFVYGGD---CG 201 (650)
Q Consensus 131 hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~------R~~hs~v~~~~~Iyv~GG~---~~ 201 (650)
.......+++.+++..... ......++++|+.+.+...+.. .+.. .......-.+..|++..-. ..
T Consensus 241 ~~~~~spdg~~l~~~~~~~--~~~~~~l~~~d~~~g~~~~l~~---~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 315 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLK--GSPDRFIYSADPETLENRQLTS---MPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYK 315 (388)
T ss_dssp EEEEECTTSSCEEEEEEET--TCCCEEEEEECTTTCCEEEEEE---ECCEEEEEECTTSSEEEEEECCC-----------
T ss_pred ccceECCCCCEEEEEecCC--CCCcceEEEEecCCCceEEEEc---CCCceeeeecCCCCeEccCCCcceeEeeeccccc
Confidence 2223334555443333221 1112359999999887655431 1110 0011111222333322100 00
Q ss_pred CCccCeEEEEECCCCcEEEeeecCCCCC-------cccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 202 DQYHGDIDMLDMNSLTWSRLAIIGSSPG-------VRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 202 ~~~~n~v~~yd~~t~~W~~i~~~g~~P~-------~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
......++++|+.+.+...+........ ......+...+++.+++..... ....+|.+|+....|
T Consensus 316 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~--g~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 316 IENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVH--GKPALYLATLPESVW 387 (388)
T ss_dssp -CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT--SSCEEEEEECCGGGG
T ss_pred cCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCC--CceeEEEEECChhcc
Confidence 1223579999999988877764221000 0112222334454444433222 235799999887765
No 171
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=90.64 E-value=2.2 Score=43.93 Aligned_cols=199 Identities=12% Similarity=0.113 Sum_probs=86.9
Q ss_pred CCEEEEEccCCCCcc-cceEEEEECCCCcEEEeecCCCCCCCCc-ceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 37 HGAVYIFGGCCGGLH-FGDVLMLNLDTMVWSTLATTGQGPGPRD-SHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~-~~dv~~yD~~t~sW~~l~~~g~~P~pR~-~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
++.+++-|+.+.... -..++.|+..+..-...... ....... -.++++. ++++++ |+.++ .+.++|+.+.
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~s~d~~~l~-~s~dg-----~v~lWd~~~~ 125 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCT-AGVQTEAGVTDVAWVSEKGILV-ASDSG-----AVELWEILEK 125 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCS-EEEECSSCEEEEEEETTTEEEE-EETTS-----CEEEC-----
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEec-ccCCCCCCEEEEEEcCCCCEEE-EECCC-----EEEEeecccc
Confidence 577777777543222 23577777654321100000 0000011 1223333 566554 54432 4777787765
Q ss_pred cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee---c
Q 006334 114 EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI---A 190 (650)
Q Consensus 114 ~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~---~ 190 (650)
+-..+...........-.++....++++++.|+.+ ..+.+||..+.+-...- ......-..+.+ +
T Consensus 126 ~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-------g~v~iwd~~~~~~~~~~-----~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 126 ESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-------FSVKVWDLSQKAVLKSY-----NAHSSEVNCVAACPGK 193 (357)
T ss_dssp ---CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-------SCEEEEETTTTEEEEEE-----CCCSSCEEEEEECTTC
T ss_pred ceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-------CeEEEEECCCCcEEEEE-----cCCCCCEEEEEEccCC
Confidence 43221000000011112233444567778888763 24788898876543211 111111112222 2
Q ss_pred CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE---CCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 191 NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI---GTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 191 ~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~---~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
+.+++.++.+ ..+.+||+.+.+-.... ..........++.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 194 ~~~~~s~~~d-----g~v~~wd~~~~~~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d-----~~i~~wd~~~~~ 260 (357)
T 4g56_B 194 DTIFLSCGED-----GRILLWDTRKPKPATRI---DFCASDTIPTSVTWHPEKDDTFACGDET-----GNVSLVNIKNPD 260 (357)
T ss_dssp SSCEEEEETT-----SCEEECCTTSSSCBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESS-----SCEEEEESSCGG
T ss_pred CceeeeeccC-----CceEEEECCCCceeeee---eeccccccccchhhhhcccceEEEeecc-----cceeEEECCCCc
Confidence 3567777755 36788888765432211 11111122223333 34677777653 358889987654
No 172
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=90.37 E-value=14 Score=36.20 Aligned_cols=191 Identities=9% Similarity=0.055 Sum_probs=90.9
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCc---EEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMV---WSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~s---W~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
+.+++-||.++ .+.++|+.+.. ......... ....-.++.+ .++++++.|+.++ .+..++....
T Consensus 51 ~~~l~S~s~D~-----~i~vWd~~~~~~~~~~~~~~l~~--h~~~V~~~~~s~dg~~l~s~~~d~-----~i~~~~~~~~ 118 (340)
T 4aow_A 51 PDMILSASRDK-----TIIMWKLTRDETNYGIPQRALRG--HSHFVSDVVISSDGQFALSGSWDG-----TLRLWDLTTG 118 (340)
T ss_dssp TTEEEEEETTS-----CEEEEEECCSSSCSEEEEEEECC--CSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTT
T ss_pred CCEEEEEcCCC-----eEEEEECCCCCcccceeeEEEeC--CCCCEEEEEECCCCCEEEEEcccc-----cceEEeeccc
Confidence 46777787654 46666665432 122211100 0111112222 2567777777654 4677777776
Q ss_pred cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee----
Q 006334 114 EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI---- 189 (650)
Q Consensus 114 ~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~---- 189 (650)
........ ............++.+++.|+.+ ..+.+||.....-..... .........+.+
T Consensus 119 ~~~~~~~~----~~~~~~~~~~~~~~~~l~s~s~d-------~~~~~~d~~~~~~~~~~~----~~~~~~v~~~~~~~~~ 183 (340)
T 4aow_A 119 TTTRRFVG----HTKDVLSVAFSSDNRQIVSGSRD-------KTIKLWNTLGVCKYTVQD----ESHSEWVSCVRFSPNS 183 (340)
T ss_dssp EEEEEEEC----CSSCEEEEEECTTSSCEEEEETT-------SCEEEECTTSCEEEEECS----SSCSSCEEEEEECSCS
T ss_pred ceeeeecC----CCCceeEEEEeecCccceeecCC-------CeEEEEEeCCCceEEEEe----ccccCcccceEEccCC
Confidence 54443111 11122223333456666777653 235667765443222111 111111112221
Q ss_pred cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 190 ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 190 ~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
.+.+++.|+.+ ..+..||+.+.+....-. . .. ..-.+++. .++++++.|+.+ ..+.+||+.+..-
T Consensus 184 ~~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~--~-h~-~~v~~~~~s~~~~~l~s~s~D-----g~i~iwd~~~~~~ 249 (340)
T 4aow_A 184 SNPIIVSCGWD-----KLVKVWNLANCKLKTNHI--G-HT-GYLNTVTVSPDGSLCASGGKD-----GQAMLWDLNEGKH 249 (340)
T ss_dssp SSCEEEEEETT-----SCEEEEETTTTEEEEEEC--C-CS-SCEEEEEECTTSSEEEEEETT-----CEEEEEETTTTEE
T ss_pred CCcEEEEEcCC-----CEEEEEECCCCceeeEec--C-CC-CcEEEEEECCCCCEEEEEeCC-----CeEEEEEeccCce
Confidence 23466666654 368889988776543321 1 11 11122222 245777777754 3588889887654
Q ss_pred E
Q 006334 269 S 269 (650)
Q Consensus 269 ~ 269 (650)
.
T Consensus 250 ~ 250 (340)
T 4aow_A 250 L 250 (340)
T ss_dssp E
T ss_pred e
Confidence 3
No 173
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=90.20 E-value=16 Score=36.41 Aligned_cols=204 Identities=11% Similarity=0.089 Sum_probs=102.1
Q ss_pred cceeEEEEE-CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeE
Q 006334 28 RWGHSACYS-HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDL 105 (650)
Q Consensus 28 R~ghs~v~~-~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv 105 (650)
.....+++. ++.||+.-- ....+++||+... ....... +..-+.+++. ++++||...... ...+
T Consensus 32 ~~pegia~~~~g~lyv~d~-----~~~~I~~~d~~g~-~~~~~~~-----~~~p~gia~~~dG~l~vad~~~~---~~~v 97 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNH-----EVGEIVSITPDGN-QQIHATV-----EGKVSGLAFTSNGDLVATGWNAD---SIPV 97 (306)
T ss_dssp CCEEEEEECTTSCEEEEET-----TTTEEEEECTTCC-EEEEEEC-----SSEEEEEEECTTSCEEEEEECTT---SCEE
T ss_pred CCcceEEECCCCCEEEEeC-----CCCeEEEECCCCc-eEEEEeC-----CCCceeEEEcCCCcEEEEeccCC---cceE
Confidence 444455543 467888643 2346899998864 3333222 1223444443 577888653211 1258
Q ss_pred EEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc---eeeccc-cCCCCCC-
Q 006334 106 HILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR---WASPAV-KGDIPVP- 180 (650)
Q Consensus 106 ~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~---Wt~i~~-~~~lP~~- 180 (650)
++||..+.+.+.+. ..+..+.....+...++.+|+.-- ....+|++|+.+.. |..-.. ....+..
T Consensus 98 ~~~d~~~g~~~~~~---~~~~~~~~~g~~~~~~~~~~v~d~-------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~ 167 (306)
T 2p4o_A 98 VSLVKSDGTVETLL---TLPDAIFLNGITPLSDTQYLTADS-------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESV 167 (306)
T ss_dssp EEEECTTSCEEEEE---ECTTCSCEEEEEESSSSEEEEEET-------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCC
T ss_pred EEEcCCCCeEEEEE---eCCCccccCcccccCCCcEEEEEC-------CCCeEEEEeCCCCcEeEEEECCccccccccCC
Confidence 89998888876652 223334444444444566776421 12479999987542 211000 0001101
Q ss_pred -CCcceeeeecCEEEEEeccCCCCccCeEEEEECCC-CcE---EEeeecCCCCCcccceEEEEECCEEEEEeccCCCccc
Q 006334 181 -RDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNS-LTW---SRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYY 255 (650)
Q Consensus 181 -R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t-~~W---~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~ 255 (650)
.....+...++.||+.-- ..+.+++||++. .+. ..+.. .. .-...++.-+++||+.-. ..
T Consensus 168 ~~~pngis~dg~~lyv~d~-----~~~~I~~~~~~~~g~~~~~~~~~~---~~--~P~gi~vd~dG~l~va~~-----~~ 232 (306)
T 2p4o_A 168 FPAANGLKRFGNFLYVSNT-----EKMLLLRIPVDSTDKPGEPEIFVE---QT--NIDDFAFDVEGNLYGATH-----IY 232 (306)
T ss_dssp SCSEEEEEEETTEEEEEET-----TTTEEEEEEBCTTSCBCCCEEEEE---SC--CCSSEEEBTTCCEEEECB-----TT
T ss_pred CCcCCCcCcCCCEEEEEeC-----CCCEEEEEEeCCCCCCCccEEEec---cC--CCCCeEECCCCCEEEEeC-----CC
Confidence 111122222457887632 236899999864 221 11111 11 111222223567888732 23
Q ss_pred CeEEEEECCCCcEEEe
Q 006334 256 NDIWILNVSTCSWSQL 271 (650)
Q Consensus 256 ~dv~~yD~~t~~W~~l 271 (650)
+.|.+||+. .+...+
T Consensus 233 ~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 233 NSVVRIAPD-RSTTII 247 (306)
T ss_dssp CCEEEECTT-CCEEEE
T ss_pred CeEEEECCC-CCEEEE
Confidence 579999986 444433
No 174
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=90.06 E-value=26 Score=38.74 Aligned_cols=76 Identities=16% Similarity=0.208 Sum_probs=44.1
Q ss_pred cCeEEEEECCCCc--EEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCc--EEEeecCCCCCCC
Q 006334 205 HGDIDMLDMNSLT--WSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCS--WSQLDTCGQQPQG 280 (650)
Q Consensus 205 ~n~v~~yd~~t~~--W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~--W~~l~~~~~~p~~ 280 (650)
...++.+|+.+.+ |+.-.. .+.....++..++.+|+ |.. ...++.||.++.+ |+.-. +..
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~-----~~~~~~~~~t~gg~v~~-g~~-----dg~l~a~D~~tG~~lw~~~~-----~~~ 506 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK-----FAAWGGTLYTKGGLVWY-ATL-----DGYLKALDNKDGKELWNFKM-----PSG 506 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES-----SCCCSBCEEETTTEEEE-ECT-----TSEEEEEETTTCCEEEEEEC-----SSC
T ss_pred CCeEEEEECCCCCEEEEecCC-----CCccceeEEECCCEEEE-EcC-----CCeEEEEECCCCCEEEEEeC-----CCC
Confidence 3679999988765 876431 11222334455777777 322 2579999998765 76532 112
Q ss_pred cceeEEE-EECCeEEEE
Q 006334 281 RFSHAAV-VTGSDIVIY 296 (650)
Q Consensus 281 R~~hsav-~~~~~lyV~ 296 (650)
..+..++ ..++++||.
T Consensus 507 ~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 507 GIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp CCSCCEEEEETTEEEEE
T ss_pred cEeeeEEEEECCEEEEE
Confidence 2222233 268888776
No 175
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=89.99 E-value=16 Score=39.55 Aligned_cols=158 Identities=13% Similarity=0.022 Sum_probs=87.7
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcce-EEEEE--CCEEEEEcccCCCcCcCeEEEE
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSH-SAILW--GHKMIVFGGTNGYKKVNDLHIL 108 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~h-sa~~~--~~~lyVfGG~~~~~~~ndv~~y 108 (650)
+++.+++.+|+|=| +.+|+++.....+.........|.--... ++... ++++|+|=| +.+|+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~iDAa~~~~~~g~~~fFKg-------~~~W~~ 332 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKG-------NKYWAV 332 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSSCCEEEEEGGGTEEEEEET-------TEEEEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCCeeEEEEEcCCCeEEEEeC-------CEEEEe
Confidence 45568999999998 36788876655554433322222111112 22222 689999987 578888
Q ss_pred ECCCC--cE-Eeee-cCCCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceee-----cc-ccCCC
Q 006334 109 DLESK--EW-MRPE-CRGAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-----PA-VKGDI 177 (650)
Q Consensus 109 D~~t~--~W-~~l~-~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-----i~-~~~~l 177 (650)
+..+- .+ +.+. ..+-+..+..--++.... ++++|+|-|. ..|+||..+.+-.. +. .-..+
T Consensus 333 ~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~---------~yw~yd~~~~~~~~gYPk~I~~~fpgi 403 (450)
T 1su3_A 333 QGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVAN---------KYWRYDEYKRSMDPGYPKMIAHDFPGI 403 (450)
T ss_dssp ETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETT---------EEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred cCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCC---------EEEEEeCCCccccCCCCcchhhcCCCC
Confidence 74321 01 1121 011111122233444443 5899999773 58999976543221 11 00122
Q ss_pred CCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEe
Q 006334 178 PVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRL 221 (650)
Q Consensus 178 P~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i 221 (650)
| ..--+++..++++|+|-| +..|+||..+.+-...
T Consensus 404 p--~~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~v~~~ 438 (450)
T 1su3_A 404 G--HKVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRILTL 438 (450)
T ss_dssp C--SCCSEEEEETTEEEEEET-------TEEEEEETTTTEEEEE
T ss_pred C--CCccEEEEcCCeEEEEeC-------CEEEEEECCcceEecc
Confidence 2 222344456899999988 6889999888765543
No 176
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.74 E-value=4.3 Score=49.00 Aligned_cols=187 Identities=12% Similarity=0.082 Sum_probs=93.2
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
++..++.|+.+ ..+++||..+......... . .......+...+++.++.|+.++ .+..+|..+....
T Consensus 972 ~g~~l~~g~~~-----g~i~i~d~~~~~~~~~~~~-h--~~~v~~l~~s~dg~~l~s~~~dg-----~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 972 HLEYVAFGDED-----GAIKIIELPNNRVFSSGVG-H--KKAVRHIQFTADGKTLISSSEDS-----VIQVWNWQTGDYV 1038 (1249)
T ss_dssp TSSEEEEEETT-----SCCEEEETTTTSCEEECCC-C--SSCCCCEEECSSSSCEEEECSSS-----BEEEEETTTTEEE
T ss_pred CCCEEEEEcCC-----CCEEEEEcCCCceeeeccc-C--CCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCceE
Confidence 35566666543 3578888877654332111 1 11112222233667777776543 5888999888776
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEE
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVY 196 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~ 196 (650)
.+. ........+....++. ++.|+.+ ..+.+||+.+.+-...- ..........+..-++.+++.
T Consensus 1039 ~~~-----~~~~~v~~~~~~~~~~-l~~~~~d-------g~v~vwd~~~~~~~~~~---~~~~~~v~~~~~s~d~~~l~s 1102 (1249)
T 3sfz_A 1039 FLQ-----AHQETVKDFRLLQDSR-LLSWSFD-------GTVKVWNVITGRIERDF---TCHQGTVLSCAISSDATKFSS 1102 (1249)
T ss_dssp CCB-----CCSSCEEEEEECSSSE-EEEEESS-------SEEEEEETTTTCCCEEE---ECCSSCCCCEEECSSSSSCEE
T ss_pred EEe-----cCCCcEEEEEEcCCCc-EEEEECC-------CcEEEEECCCCceeEEE---cccCCcEEEEEECCCCCEEEE
Confidence 531 1112222333333444 5555553 35888898776533211 001111111122235666777
Q ss_pred eccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE--ECCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 197 GGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN--IGTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 197 GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~--~~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
|+.++ .+..||..+..- +. ..........++. .++++++.|+.++ .+.+||+.+.+
T Consensus 1103 ~s~d~-----~v~iwd~~~~~~--~~---~l~~h~~~v~~~~~s~dg~~lat~~~dg-----~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1103 TSADK-----TAKIWSFDLLSP--LH---ELKGHNGCVRCSAFSLDGILLATGDDNG-----EIRIWNVSDGQ 1160 (1249)
T ss_dssp ECCSS-----CCCEECSSSSSC--SB---CCCCCSSCEEEEEECSSSSEEEEEETTS-----CCCEEESSSSC
T ss_pred EcCCC-----cEEEEECCCcce--ee---eeccCCCcEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCc
Confidence 77553 566777665431 11 1111111122222 3567777777543 47788887654
No 177
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=89.51 E-value=32 Score=38.97 Aligned_cols=120 Identities=15% Similarity=0.155 Sum_probs=67.3
Q ss_pred EEECCEEEEEcccCCCcCcCeEEEEECCCCc--EEeeecCCCCCC-----C---CcccEEEEEcCCEEEEEccccCCCCc
Q 006334 84 ILWGHKMIVFGGTNGYKKVNDLHILDLESKE--WMRPECRGAPPS-----P---RESHTATLVGDDKMVIFGGSGEGEAN 153 (650)
Q Consensus 84 ~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~--W~~l~~~~~~P~-----~---R~~hs~~~~~~~~Lyv~GG~~~~~~~ 153 (650)
++.++.||+... .+.++.+|..+.+ |+.-. ..+. . ....+.+ +.+++||+...
T Consensus 67 ~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~---~~~~~~~~~~~~~~~~~~~~-~~~g~v~v~~~------- 129 (689)
T 1yiq_A 67 IVVDGVMYTTGP------FSVVYALDARDGRLIWKYDP---QSDRHRAGEACCDAVNRGVA-VWKGKVYVGVL------- 129 (689)
T ss_dssp EEETTEEEEECG------GGCEEEEETTTCCEEEEECC---CCCGGGGGGCTTCSCCCCCE-EETTEEEEECT-------
T ss_pred EEECCEEEEEcC------CCeEEEEECCCCceeEEEcC---CCCccccccccccCCCCccE-EECCEEEEEcc-------
Confidence 567999999764 2469999998774 87621 1110 0 0011223 33678777432
Q ss_pred ccceEEEEecCCC--ceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCc--EEEe
Q 006334 154 YLNDLHVLDLKTM--RWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLT--WSRL 221 (650)
Q Consensus 154 ~~~dv~~yd~~t~--~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~--W~~i 221 (650)
-..++.+|.++. .|+.-.............+.++.++.+|+-.+.........++.||..+.+ |+.-
T Consensus 130 -dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 130 -DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp -TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred -CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 135889998776 487532101000011223445668888774332222245689999998776 8764
No 178
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=89.50 E-value=33 Score=40.65 Aligned_cols=199 Identities=11% Similarity=0.107 Sum_probs=103.9
Q ss_pred EEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 34 CYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 34 v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
+...+.+++.+..++ ...+|.+|........+.... .....+...+++.++++. ...++.+|+...
T Consensus 210 ~~s~d~l~~~~~~dg---~~~l~~~~~~g~~~~~l~~~~-----~~~~~~~SpDG~~la~~~------~~~i~~~d~~~~ 275 (1045)
T 1k32_A 210 VIVGHRIYFITDIDG---FGQIYSTDLDGKDLRKHTSFT-----DYYPRHLNTDGRRILFSK------GGSIYIFNPDTE 275 (1045)
T ss_dssp EEETTEEEEEECTTS---SCEEEEEETTSCSCEECCCCC-----SSCEEEEEESSSCEEEEE------TTEEEEECTTTC
T ss_pred EEeCCEEEEEEeccC---ceEEEEEeCCCCcceEecCCC-----CcceeeEcCCCCEEEEEe------CCEEEEecCCce
Confidence 344666666654322 346898998766555554321 111223345666556552 357899988665
Q ss_pred cEEeeecCCCCCC------CCcccEEEEE-cCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCccee
Q 006334 114 EWMRPECRGAPPS------PRESHTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSS 186 (650)
Q Consensus 114 ~W~~l~~~~~~P~------~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~ 186 (650)
....+........ ......+... .+++.++++.. ..++.++..+.....+. ..+..+.....
T Consensus 276 ~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~--------~~i~~~~~~~~~~~~~~---~~~~~~~~~~~ 344 (1045)
T 1k32_A 276 KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSR--------GQAFIQDVSGTYVLKVP---EPLRIRYVRRG 344 (1045)
T ss_dssp CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEET--------TEEEEECTTSSBEEECS---CCSCEEEEEEC
T ss_pred EeeeeccCcccccccccccccccceeeecCCCCCEEEEEEc--------CEEEEEcCCCCceEEcc---CCCcceEEeee
Confidence 5544321100000 0123445555 56665555542 35888888776654432 11110111112
Q ss_pred eeecCEEEEEeccCCCCccCeEE-EEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCC
Q 006334 187 NVIANRLFVYGGDCGDQYHGDID-MLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 187 v~~~~~Iyv~GG~~~~~~~n~v~-~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
.. +++.+++++. ...++ .||..+.....+. +. .......+..-+++.++++... .+++++|+.+
T Consensus 345 ~s-dg~~l~~~s~-----~~~l~~~~d~~~~~~~~l~--~~--~~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~~t 409 (1045)
T 1k32_A 345 GD-TKVAFIHGTR-----EGDFLGIYDYRTGKAEKFE--EN--LGNVFAMGVDRNGKFAVVANDR-----FEIMTVDLET 409 (1045)
T ss_dssp SS-SEEEEEEEET-----TEEEEEEEETTTCCEEECC--CC--CCSEEEEEECTTSSEEEEEETT-----SEEEEEETTT
T ss_pred Ec-CCCeEEEEEC-----CCceEEEEECCCCCceEec--CC--ccceeeeEECCCCCEEEEECCC-----CeEEEEECCC
Confidence 22 5555555443 25788 9999887766553 11 1122222222345666665432 4899999999
Q ss_pred CcEEEee
Q 006334 266 CSWSQLD 272 (650)
Q Consensus 266 ~~W~~l~ 272 (650)
.+-..+.
T Consensus 410 g~~~~~~ 416 (1045)
T 1k32_A 410 GKPTVIE 416 (1045)
T ss_dssp CCEEEEE
T ss_pred CceEEec
Confidence 8877664
No 179
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=89.46 E-value=20 Score=36.36 Aligned_cols=186 Identities=10% Similarity=0.037 Sum_probs=96.1
Q ss_pred EEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCc
Q 006334 89 KMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMR 167 (650)
Q Consensus 89 ~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~ 167 (650)
++++.|+.++ .+.+||..+.+....... ......-.++.... ++.+++.|+.+ ..+.+||+.+..
T Consensus 87 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~ 152 (383)
T 3ei3_B 87 TTVAVGSKGG-----DIILWDYDVQNKTSFIQG--MGPGDAITGMKFNQFNTNQLFVSSIR-------GATTLRDFSGSV 152 (383)
T ss_dssp TEEEEEEBTS-----CEEEEETTSTTCEEEECC--CSTTCBEEEEEEETTEEEEEEEEETT-------TEEEEEETTSCE
T ss_pred CEEEEEcCCC-----eEEEEeCCCcccceeeec--CCcCCceeEEEeCCCCCCEEEEEeCC-------CEEEEEECCCCc
Confidence 6777777643 588899988776554110 01112223344444 34677777653 358888988766
Q ss_pred eeeccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCE-EE
Q 006334 168 WASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTK-VY 244 (650)
Q Consensus 168 Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~-Iy 244 (650)
...+..... ....-.++... ++.+++.|+.+ ..+..||+.......+... ...-.+++.. ++. ++
T Consensus 153 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 153 IQVFAKTDS--WDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLH-----KAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEEECCCC--SSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECS-----SSCEEEEEECSSCTTEE
T ss_pred eEEEeccCC--CCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccC-----CCcEEEEEECCCCCCEE
Confidence 654431110 01111122222 45677777655 4789999865554444311 1111222222 234 77
Q ss_pred EEeccCCCcccCeEEEEECCC----CcEEEeecCCCCCCCcceeEEEEE--CCeEEEEcCCCCCCCCCCcEEEEecCC
Q 006334 245 IIGGVGDKHYYNDIWILNVST----CSWSQLDTCGQQPQGRFSHAAVVT--GSDIVIYGGCGEDERPLNELLVLQLGA 316 (650)
Q Consensus 245 I~GG~~~~~~~~dv~~yD~~t----~~W~~l~~~~~~p~~R~~hsav~~--~~~lyV~GG~~~~~~~~~d~~~l~l~~ 316 (650)
+.|+.+ ..+.+||+.+ ........ ....-.++.+. ++.+++.|+.+ ..+.++++..
T Consensus 221 ~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~~l~~~~~d------~~i~iwd~~~ 282 (383)
T 3ei3_B 221 ATSSVD-----ATVKLWDLRNIKDKNSYIAEMP-----HEKPVNAAYFNPTDSTKLLTTDQR------NEIRVYSSYD 282 (383)
T ss_dssp EEEETT-----SEEEEEEGGGCCSTTCEEEEEE-----CSSCEEEEEECTTTSCEEEEEESS------SEEEEEETTB
T ss_pred EEEeCC-----CEEEEEeCCCCCcccceEEEec-----CCCceEEEEEcCCCCCEEEEEcCC------CcEEEEECCC
Confidence 777653 3688999886 33333211 11111223332 45677777642 3577777753
No 180
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=89.44 E-value=20 Score=36.42 Aligned_cols=137 Identities=14% Similarity=0.089 Sum_probs=71.5
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE---CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCc
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW---GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRE 129 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~---~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~ 129 (650)
..+.++|+.+......-.. . . ..-.++.+. ++.+++.|+.++ .+..+|+.+.+....- . .....
T Consensus 176 ~~v~lwd~~~~~~~~~~~~-h-~--~~v~~~~~~~~~~g~~l~sgs~Dg-----~v~~wd~~~~~~~~~~-~---~h~~~ 242 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHG-H-G--ADVLCLDLAPSETGNTFVSGGCDK-----KAMVWDMRSGQCVQAF-E---THESD 242 (354)
T ss_dssp SEEEEEETTTCCEEEEEEC-C-S--SCEEEEEECCCSSCCEEEEEETTS-----CEEEEETTTCCEEEEE-C---CCSSC
T ss_pred CcEEEEeCCCCeEEEEEcC-C-C--CCeEEEEEEeCCCCCEEEEEeCCC-----eEEEEECCCCcEEEEe-c---CCCCC
Confidence 3578889887765432211 1 0 011122221 356777887654 5788999887754421 1 01111
Q ss_pred ccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCe
Q 006334 130 SHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGD 207 (650)
Q Consensus 130 ~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~ 207 (650)
-.++....++.+++.|+.+ ..+.+||+.+..-..+- ...........+.+ ++.+++.|+.+ ..
T Consensus 243 v~~v~~~p~~~~l~s~s~D-------~~v~lwd~~~~~~~~~~---~~~~~~~~~~~~~~s~~g~~l~~g~~d-----~~ 307 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDD-------ATCRLYDLRADREVAIY---SKESIIFGASSVDFSLSGRLLFAGYND-----YT 307 (354)
T ss_dssp EEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEE---CCTTCCSCEEEEEECTTSSEEEEEETT-----SC
T ss_pred eEEEEEeCCCCEEEEEeCC-------CeEEEEECCCCcEEEEE---cCCCcccceeEEEEeCCCCEEEEEECC-----Cc
Confidence 2233333467778888763 24778898765432211 11111112222322 46677776654 47
Q ss_pred EEEEECCCCc
Q 006334 208 IDMLDMNSLT 217 (650)
Q Consensus 208 v~~yd~~t~~ 217 (650)
+.+||..+..
T Consensus 308 i~vwd~~~~~ 317 (354)
T 2pbi_B 308 INVWDVLKGS 317 (354)
T ss_dssp EEEEETTTCS
T ss_pred EEEEECCCCc
Confidence 8889986654
No 181
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=89.28 E-value=19 Score=35.97 Aligned_cols=205 Identities=12% Similarity=-0.025 Sum_probs=102.4
Q ss_pred EEEEE--CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCC---------
Q 006334 32 SACYS--HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNG--------- 98 (650)
Q Consensus 32 s~v~~--~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~--------- 98 (650)
.+++. ++.|||.-.. ..+++||+.+...+.+...........-..+++. ++.|||.-..+.
T Consensus 84 gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 84 DISYNLQNNQLYIVDCY------YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp EEEEETTTTEEEEEETT------TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred eEEEcCCCCcEEEEECC------CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence 34444 5789886321 2488999887655554321110001122334443 578888532211
Q ss_pred ---CcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecCCC---ceeec
Q 006334 99 ---YKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLKTM---RWASP 171 (650)
Q Consensus 99 ---~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~t~---~Wt~i 171 (650)
......+++||+.+.+.+.+... . ..-..+++..++ .||+.-.. .+.+++|++... .++.+
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~~--~---~~p~gia~~~dg~~lyv~d~~-------~~~I~~~~~~~~~~~~~~~~ 225 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLKE--L---HVPGGAEVSADSSFVLVAEFL-------SHQIVKYWLEGPKKGTAEVL 225 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEEE--E---SCCCEEEECTTSSEEEEEEGG-------GTEEEEEESSSTTTTCEEEE
T ss_pred hcccCCCceEEEEeCCCCEEEEeccC--C---ccCcceEECCCCCEEEEEeCC-------CCeEEEEECCCCcCCccceE
Confidence 01235699999988776543111 1 112334444444 47775322 246899998753 33322
Q ss_pred cccCCCCCCCCcceeee-ecCEEEEEeccCCC-----CccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEE
Q 006334 172 AVKGDIPVPRDSHSSNV-IANRLFVYGGDCGD-----QYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYI 245 (650)
Q Consensus 172 ~~~~~lP~~R~~hs~v~-~~~~Iyv~GG~~~~-----~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI 245 (650)
. .++.| ..++. -++.||+....... .....+.+||+.......+......+ .....+++..+++|||
T Consensus 226 ~---~~~gP---~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~~~~~g~L~v 298 (322)
T 2fp8_A 226 V---KIPNP---GNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQIQEHDGLLYI 298 (322)
T ss_dssp E---ECSSE---EEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTT-TSCCCEEEEETTEEEE
T ss_pred E---eCCCC---CCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCc-cccceEEEEeCCEEEE
Confidence 2 12211 11222 24678887542100 11356899998765555554211111 1223334456789998
Q ss_pred EeccCCCcccCeEEEEECCCC
Q 006334 246 IGGVGDKHYYNDIWILNVSTC 266 (650)
Q Consensus 246 ~GG~~~~~~~~dv~~yD~~t~ 266 (650)
... ..+.|.+|++..+
T Consensus 299 ~~~-----~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 299 GTL-----FHGSVGILVYDKK 314 (322)
T ss_dssp ECS-----SCSEEEEEEC---
T ss_pred eec-----CCCceEEEecccc
Confidence 742 2356888887643
No 182
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=89.20 E-value=19 Score=35.92 Aligned_cols=234 Identities=9% Similarity=-0.089 Sum_probs=117.8
Q ss_pred ceEEEEECCCCcEEEeecCCCC---------------CCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 53 GDVLMLNLDTMVWSTLATTGQG---------------PGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~---------------P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
..+++||+.+..+......... +....-+++++. +++|||.-.. +.+++||+.+...
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 5689999988777665422100 000112455555 5789986322 3488999887655
Q ss_pred EeeecCCCCCCCCcccEEEEEc-CCEEEEEccccCCC----------CcccceEEEEecCCCceeeccccCCCCCCCCcc
Q 006334 116 MRPECRGAPPSPRESHTATLVG-DDKMVIFGGSGEGE----------ANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSH 184 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~----------~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~h 184 (650)
+.+...........-..+++.. ++.||+.-...... ......+++||+.+.+...+......| .
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p-----~ 188 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP-----G 188 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC-----C
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC-----c
Confidence 5442111100111223445555 67888853210000 011256999999877665432111111 2
Q ss_pred eeeee-c-CEEEEEeccCCCCccCeEEEEECCC---CcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCC-----c
Q 006334 185 SSNVI-A-NRLFVYGGDCGDQYHGDIDMLDMNS---LTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDK-----H 253 (650)
Q Consensus 185 s~v~~-~-~~Iyv~GG~~~~~~~n~v~~yd~~t---~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~-----~ 253 (650)
.++.. + +.||+.-.. .+.+++|++.. ..++.+.. .+. -..++.. ++.|||.-..... .
T Consensus 189 gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~---~~g---P~gi~~d~~G~l~va~~~~~~~~~~~~ 257 (322)
T 2fp8_A 189 GAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVK---IPN---PGNIKRNADGHFWVSSSEELDGNMHGR 257 (322)
T ss_dssp EEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEE---CSS---EEEEEECTTSCEEEEEEEETTSSTTSC
T ss_pred ceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEe---CCC---CCCeEECCCCCEEEEecCcccccccCC
Confidence 22332 3 358876332 35899999875 34554442 221 1223332 3578887532100 0
Q ss_pred ccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 254 YYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 254 ~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
....+++||+....-..+......+ ...-.+++..++.|||..-. .+.+.++++.
T Consensus 258 ~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~~~~~g~L~v~~~~------~~~i~~~~~~ 312 (322)
T 2fp8_A 258 VDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQIQEHDGLLYIGTLF------HGSVGILVYD 312 (322)
T ss_dssp EEEEEEEECTTSCEEEEEECCTTTT-TSCCCEEEEETTEEEEECSS------CSEEEEEEC-
T ss_pred CccEEEEECCCCCEEEEEECCCCCc-cccceEEEEeCCEEEEeecC------CCceEEEecc
Confidence 1346899998765555554321111 12223444567888887432 2467777764
No 183
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=89.18 E-value=17 Score=39.45 Aligned_cols=224 Identities=19% Similarity=0.233 Sum_probs=114.6
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCc--E-EEeecC-CCCCCCCcceEEEE-----ECCEEEEEcccCCCcCcCeEEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMV--W-STLATT-GQGPGPRDSHSAIL-----WGHKMIVFGGTNGYKKVNDLHI 107 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~s--W-~~l~~~-g~~P~pR~~hsa~~-----~~~~lyVfGG~~~~~~~ndv~~ 107 (650)
++.+|+|=| +.+|+|+-.... + ..+... ...|. .-.++... .++++|+|-| +.+|+
T Consensus 107 ~g~~yfFkG-------~~yW~~~~~~~~~GYPk~I~~~fpGlp~-~IDAA~~~~~~~~~~~~~yfFkG-------~~yw~ 171 (460)
T 1qhu_A 107 HTSVYLIKG-------DKVWVYTSEKNEKVYPKSLQDEFPGIPF-PLDAAVECHRGECQDEGILFFQG-------NRKWF 171 (460)
T ss_dssp TTEEEEEET-------TEEEEECC-------CEEHHHHSTTCCS-SCCEEEEECBBTBSSSEEEEEET-------TEEEE
T ss_pred CCcEEEEec-------cEEEEEeCCcccCCCCeEhhhccCCCCC-CeeEEEECCccCCCCCeEEEEec-------ccEEE
Confidence 589999988 468888633210 1 111111 11222 12222211 2678899887 57899
Q ss_pred EECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc------------eeeccccC
Q 006334 108 LDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR------------WASPAVKG 175 (650)
Q Consensus 108 yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~------------Wt~i~~~~ 175 (650)
||..+++...-.- ... +. .-++... ++++|+|-|. ..|+||..+.+ |..+...+
T Consensus 172 yd~~~~~~~~~~w-~gi--~~-iDAA~~~-~g~~YfFkG~---------~y~rfd~~~~~v~~gyPk~is~~w~~c~~~g 237 (460)
T 1qhu_A 172 WDLTTGTKKERSW-PAV--GN-CTSALRW-LGRYYCFQGN---------QFLRFNPVSGEVPPGYPLDVRDYFLSCPGRG 237 (460)
T ss_dssp EETTTTEEEEECC-TTS--CC-CSEEEEE-TTEEEEEETT---------EEEEECTTTCCCCTTCCEEHHHHTSCCTTCC
T ss_pred EecccceeecccC-CCC--Cc-cchheee-CCceEEEECC---------EEEEEcCccCcccCCCCcchhhcccCCCCCC
Confidence 9998876543211 111 22 2344444 5899999885 37778765432 32222100
Q ss_pred ------------CCC---CCC-Ccceeee-ecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeec---CCCCCcccceE
Q 006334 176 ------------DIP---VPR-DSHSSNV-IANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAII---GSSPGVRAGHA 235 (650)
Q Consensus 176 ------------~lP---~~R-~~hs~v~-~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~---g~~P~~R~~~s 235 (650)
..| .+. ..-+++. .++++|+|-| +..|++|.....+...... ..+|. .--+
T Consensus 238 ~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~~Is~~WpglP~--~IDA 308 (460)
T 1qhu_A 238 HRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS--TVDA 308 (460)
T ss_dssp SCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCEEGGGTCTTSCS--SCSE
T ss_pred CccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCccchhhhccCCCC--CCcE
Confidence 000 011 1123333 4689999988 5677777654333221111 12232 2334
Q ss_pred EEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEeec--------CCCCCCC----cceeEEEE-ECCeEEEEcCCCCC
Q 006334 236 AINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDT--------CGQQPQG----RFSHAAVV-TGSDIVIYGGCGED 302 (650)
Q Consensus 236 ~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~--------~~~~p~~----R~~hsav~-~~~~lyV~GG~~~~ 302 (650)
+...++++|+|-| +..|+|+.... .+.++. .+ +|.. +..++... .++++|+|-|
T Consensus 309 Af~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lG-lp~~~~~~~IDAA~~~~~~~ktyfFkG---- 375 (460)
T 1qhu_A 309 AFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELG-SPPVISLEAVDAAFVCPGSSRLHIMAG---- 375 (460)
T ss_dssp EEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHC-CCSSCCCSCCCEEECCTTCCEEEEEET----
T ss_pred EEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhcc-CCCccccCcccEEEEeCCCCEEEEEEC----
Confidence 4456789999966 46888986531 222211 11 2221 22222222 2578999976
Q ss_pred CCCCCcEEEEecC
Q 006334 303 ERPLNELLVLQLG 315 (650)
Q Consensus 303 ~~~~~d~~~l~l~ 315 (650)
+..|+++..
T Consensus 376 ----~~ywryd~~ 384 (460)
T 1qhu_A 376 ----RRLWWLDLK 384 (460)
T ss_dssp ----TEEEEEEGG
T ss_pred ----CEEEEEECC
Confidence 468888876
No 184
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=89.16 E-value=6 Score=39.86 Aligned_cols=151 Identities=11% Similarity=0.107 Sum_probs=70.6
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcC--CEEEEEccccCCCCcccceEEEEecC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGD--DKMVIFGGSGEGEANYLNDLHVLDLK 164 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~--~~Lyv~GG~~~~~~~~~~dv~~yd~~ 164 (650)
++.+++.|+.++ .+..+|..+..|..+..-.... ..-.++....+ +.+++.|+.+ ..+.+||+.
T Consensus 164 ~~~~l~s~s~D~-----~i~iW~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~s~D-------~~v~iw~~~ 229 (330)
T 2hes_X 164 SEALLASSSYDD-----TVRIWKDYDDDWECVAVLNGHE--GTVWSSDFDKTEGVFRLCSGSDD-------STVRVWKYM 229 (330)
T ss_dssp SSSEEEEEETTS-----CEEEEEEETTEEEEEEEECCCS--SCEEEEEECCSSSSCEEEEEETT-------SCEEEEEEE
T ss_pred CCCEEEEEcCCC-----eEEEEECCCCCeeEEEEccCCC--CcEEEEEecCCCCeeEEEEEeCC-------CeEEEEEec
Confidence 567777777654 4666777666666542211111 11112222222 3456666653 235555553
Q ss_pred C------CceeeccccCCCCC--CCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEE
Q 006334 165 T------MRWASPAVKGDIPV--PRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAA 236 (650)
Q Consensus 165 t------~~Wt~i~~~~~lP~--~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~ 236 (650)
+ ..|.... .++. ...-.+++...+.+++.||.+ ..+.+||..+..|..+..... ........+
T Consensus 230 ~~~~~~~~~~~~~~---~~~~~h~~~v~~v~~s~~~~l~s~~~d-----g~v~iw~~~~~~~~~~~~~~~-~h~~~~v~~ 300 (330)
T 2hes_X 230 GDDEDDQQEWVCEA---ILPDVHKRQVYNVAWGFNGLIASVGAD-----GVLAVYEEVDGEWKVFAKRAL-CHGVYEINV 300 (330)
T ss_dssp EECTTSCEEEEEEE---ECCSCCSSCEEEEEECTTSCEEEEETT-----SCEEEEEEETTEEEEEEEESC-TTTTSCEEE
T ss_pred CCCccccceeEEee---ecccccccceEEEEEcCCCEEEEEeCC-----CEEEEEEcCCCceEEEecccc-ccccceEEE
Confidence 2 2344332 1211 111122223344566667754 468888888888876543211 111111222
Q ss_pred EEE----CCEEEEEeccCCCcccCeEEEEECCC
Q 006334 237 INI----GTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 237 v~~----~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
+.. ++++++.||.++ .+.+||+++
T Consensus 301 v~~~~~~~~~~las~s~Dg-----~v~~W~~~~ 328 (330)
T 2hes_X 301 VKWLELNGKTILATGGDDG-----IVNFWSLEK 328 (330)
T ss_dssp EEEC-----CCEEEEETTS-----EEEEEEC--
T ss_pred EEEecCCCceEEEEecCCC-----cEEEEEecc
Confidence 222 356777777543 466777653
No 185
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=89.06 E-value=20 Score=35.96 Aligned_cols=203 Identities=14% Similarity=0.133 Sum_probs=101.9
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCC--cEEEeecCCC---CCC-CCcceEEEEE--CCEEEEEcccCCCcCcCeEEEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTM--VWSTLATTGQ---GPG-PRDSHSAILW--GHKMIVFGGTNGYKKVNDLHIL 108 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~--sW~~l~~~g~---~P~-pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~y 108 (650)
++.||+.... .+.+++||+... .-..+...+. ... -..-..+++. ++.|||..++. .+.+++|
T Consensus 101 ~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~~ 171 (329)
T 3fvz_A 101 DGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC----NSRIVQF 171 (329)
T ss_dssp TSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS----CCEEEEE
T ss_pred CCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC----CCeEEEE
Confidence 4567775542 246888887654 2222221110 000 1122344554 58899987521 2578899
Q ss_pred ECCCCcEEeeecCCCC----CCCCc-ccEEEEEcC-CEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCC
Q 006334 109 DLESKEWMRPECRGAP----PSPRE-SHTATLVGD-DKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRD 182 (650)
Q Consensus 109 D~~t~~W~~l~~~~~~----P~~R~-~hs~~~~~~-~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~ 182 (650)
|.....-..+...+.. +.... -+.+++..+ +.||+.... .+.+.+||+++.++...-. .......
T Consensus 172 ~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-------~~~I~~~~~~~G~~~~~~~--~~~~~~~ 242 (329)
T 3fvz_A 172 SPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-------NGRIQCFKTDTKEFVREIK--HASFGRN 242 (329)
T ss_dssp CTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-------TTEEEEEETTTCCEEEEEC--CTTTTTC
T ss_pred cCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-------CCEEEEEECCCCcEEEEEe--ccccCCC
Confidence 8654433333211111 11111 234444455 789987543 2468999998666543211 1111111
Q ss_pred cceeeeecCEEEEEeccC--CCCccCeEEEEECCCCcEEEeeecCCCCCccc-ceEEEEE-CCEEEEEeccCCCcccCeE
Q 006334 183 SHSSNVIANRLFVYGGDC--GDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRA-GHAAINI-GTKVYIIGGVGDKHYYNDI 258 (650)
Q Consensus 183 ~hs~v~~~~~Iyv~GG~~--~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~-~~s~v~~-~~~IyI~GG~~~~~~~~dv 258 (650)
-..++...+.+|+..|.. .......++++|..+.+....- +....... -..++.. ++.|||.... .+.|
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~--~~~~~~~~~p~~ia~~~dG~lyvad~~-----~~~I 315 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF--KPVRKHFDMPHDIVASEDGTVYIGDAH-----TNTV 315 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE--CCSSSCCSSEEEEEECTTSEEEEEESS-----SCCE
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE--cCCCCccCCeeEEEECCCCCEEEEECC-----CCEE
Confidence 123333346777776632 2233468999998888765542 11111112 2233332 3588888533 3468
Q ss_pred EEEECC
Q 006334 259 WILNVS 264 (650)
Q Consensus 259 ~~yD~~ 264 (650)
++|++.
T Consensus 316 ~~~~~~ 321 (329)
T 3fvz_A 316 WKFTLT 321 (329)
T ss_dssp EEEEEE
T ss_pred EEEeCC
Confidence 888765
No 186
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.04 E-value=23 Score=42.56 Aligned_cols=220 Identities=9% Similarity=0.070 Sum_probs=105.3
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.+++.||.+ ..+.+||..+......-.. . ...-.++++ .++++++.|+.+ ..+.++|..+.+.
T Consensus 626 ~~~~l~s~~~d-----~~i~vw~~~~~~~~~~~~~-h---~~~v~~~~~s~~~~~l~s~~~d-----~~v~vwd~~~~~~ 691 (1249)
T 3sfz_A 626 DGQRIASCGAD-----KTLQVFKAETGEKLLDIKA-H---EDEVLCCAFSSDDSYIATCSAD-----KKVKIWDSATGKL 691 (1249)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTCCEEEEECC-C---SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCEEEEecc-C---CCCEEEEEEecCCCEEEEEeCC-----CeEEEEECCCCce
Confidence 45666777743 3688999988764332111 1 111122222 256777777653 3588999988765
Q ss_pred EeeecCCCCCCCCcccEEEEEc--CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cC
Q 006334 116 MRPECRGAPPSPRESHTATLVG--DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--AN 191 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~--~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~ 191 (650)
...- .+ ....-.++.... +..+++.|+.+ ..+.+||+.+......- ......-..+.+ ++
T Consensus 692 ~~~~-~~---~~~~v~~~~~~~~~~~~~l~sg~~d-------~~v~vwd~~~~~~~~~~-----~~h~~~v~~~~~sp~~ 755 (1249)
T 3sfz_A 692 VHTY-DE---HSEQVNCCHFTNKSNHLLLATGSND-------FFLKLWDLNQKECRNTM-----FGHTNSVNHCRFSPDD 755 (1249)
T ss_dssp EEEE-EC---CSSCEEEEEECSSSSCCEEEEEETT-------SCEEEEETTSSSEEEEE-----CCCSSCEEEEEECSST
T ss_pred EEEE-cC---CCCcEEEEEEecCCCceEEEEEeCC-------CeEEEEECCCcchhhee-----cCCCCCEEEEEEecCC
Confidence 4321 11 111112222222 33455566542 34888898776543211 111111112222 45
Q ss_pred EEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCC-------CC--c-ccceEEEEECCEEEEEeccCCCcccCeEEEE
Q 006334 192 RLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSS-------PG--V-RAGHAAINIGTKVYIIGGVGDKHYYNDIWIL 261 (650)
Q Consensus 192 ~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~-------P~--~-R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~y 261 (650)
.+++.|+.+ ..+..||+.+..-...-..... +. . .....+...+++.+++++ .+.+..|
T Consensus 756 ~~l~s~s~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~------~~~v~~~ 824 (1249)
T 3sfz_A 756 ELLASCSAD-----GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA------KNKVLLF 824 (1249)
T ss_dssp TEEEEEESS-----SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE------TTEEEEE
T ss_pred CEEEEEECC-----CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc------CCcEEEE
Confidence 667777655 3688888876653322111000 00 0 111111122445555554 2578999
Q ss_pred ECCCCcEEEeecCCCCCCCcceeEEEEECCeEEEEcCC
Q 006334 262 NVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGC 299 (650)
Q Consensus 262 D~~t~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~ 299 (650)
|+.+.........+ ........+..-++.+++.|+.
T Consensus 825 d~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~ 860 (1249)
T 3sfz_A 825 DIHTSGLLAEIHTG--HHSTIQYCDFSPYDHLAVIALS 860 (1249)
T ss_dssp ETTTCCEEEEEECS--SSSCCCEEEECSSTTEEEEECS
T ss_pred EecCCCceeEEcCC--CCCceEEEEEcCCCCEEEEEeC
Confidence 99888765543211 1111111222225667777664
No 187
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=89.02 E-value=9.1 Score=38.07 Aligned_cols=154 Identities=6% Similarity=-0.031 Sum_probs=76.5
Q ss_pred ceEEEEECCCCcEEEeecCCC-CCCCCcceEEEEECCEEEEE----cccCC--------CcCcCeEEEEECCCCcEEeee
Q 006334 53 GDVLMLNLDTMVWSTLATTGQ-GPGPRDSHSAILWGHKMIVF----GGTNG--------YKKVNDLHILDLESKEWMRPE 119 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~-~P~pR~~hsa~~~~~~lyVf----GG~~~--------~~~~ndv~~yD~~t~~W~~l~ 119 (650)
..+++||+. .+.+.+..... .+..+....++.-+++||+. |-... ......+|+||+.+.+++.+.
T Consensus 107 ~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 107 RAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp TEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred CEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 358888886 66665532211 01111122222236788884 43221 011357999999888887652
Q ss_pred cCCCCCCCCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEEec
Q 006334 120 CRGAPPSPRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGG 198 (650)
Q Consensus 120 ~~~~~P~~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG 198 (650)
. . ..-..++...++ .||+...... ....+.+++||+..+...........+.......++.-++.||+..+
T Consensus 186 -~--~---~~p~gl~~spdg~~lyv~~~~~~--~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~ 257 (305)
T 3dr2_A 186 -D--L---DHPNGLAFSPDEQTLYVSQTPEQ--GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG 257 (305)
T ss_dssp -E--E---SSEEEEEECTTSSEEEEEECCC-----CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS
T ss_pred -c--C---CCCcceEEcCCCCEEEEEecCCc--CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC
Confidence 1 1 112334444455 4776533210 11125799999876543221111111111111122223467887542
Q ss_pred cCCCCccCeEEEEECCCCcEEEee
Q 006334 199 DCGDQYHGDIDMLDMNSLTWSRLA 222 (650)
Q Consensus 199 ~~~~~~~n~v~~yd~~t~~W~~i~ 222 (650)
+.+++||++......+.
T Consensus 258 -------~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 258 -------TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp -------SEEEEECTTSCEEEEEE
T ss_pred -------CcEEEECCCCCEEEEEE
Confidence 46999999777666665
No 188
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=88.98 E-value=20 Score=35.93 Aligned_cols=147 Identities=12% Similarity=0.170 Sum_probs=76.3
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
++. ++.|+.+ ..+..+|+.+.+....- .+ ....-.++....++.+++.|+.+ ..+.+||+.+.
T Consensus 154 ~~~-l~s~s~d-----~~i~~wd~~~~~~~~~~-~~---h~~~v~~~~~~~~~~~l~sg~~d-------~~v~~wd~~~~ 216 (340)
T 1got_B 154 DNQ-IVTSSGD-----TTCALWDIETGQQTTTF-TG---HTGDVMSLSLAPDTRLFVSGACD-------ASAKLWDVREG 216 (340)
T ss_dssp TTE-EEEEETT-----SCEEEEETTTTEEEEEE-CC---CSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTC
T ss_pred CCc-EEEEECC-----CcEEEEECCCCcEEEEE-cC---CCCceEEEEECCCCCEEEEEeCC-------CcEEEEECCCC
Confidence 555 4455543 35788898887654321 11 11112334444567788888864 25788888765
Q ss_pred ceeeccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEE
Q 006334 167 RWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKV 243 (650)
Q Consensus 167 ~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~I 243 (650)
.-...- . . . ...-.+++.. ++.+++.|+.+ ..+..||+.+..-...- ...........+.+ ++++
T Consensus 217 ~~~~~~-~-~-h-~~~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~ 284 (340)
T 1got_B 217 MCRQTF-T-G-H-ESDINAICFFPNGNAFATGSDD-----ATCRLFDLRADQELMTY---SHDNIICGITSVSFSKSGRL 284 (340)
T ss_dssp SEEEEE-C-C-C-SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEE---CCTTCCSCEEEEEECTTSSE
T ss_pred eeEEEE-c-C-C-cCCEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcEEEEE---ccCCcccceEEEEECCCCCE
Confidence 432211 0 0 0 0111122222 46677777765 46888998876533221 11111112223332 4577
Q ss_pred EEEeccCCCcccCeEEEEECCCCc
Q 006334 244 YIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 244 yI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
++.|+.+ ..+.+||+.+..
T Consensus 285 l~~g~~d-----~~i~vwd~~~~~ 303 (340)
T 1got_B 285 LLAGYDD-----FNCNVWDALKAD 303 (340)
T ss_dssp EEEEETT-----SEEEEEETTTCC
T ss_pred EEEECCC-----CeEEEEEcccCc
Confidence 7777653 368899987654
No 189
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=88.79 E-value=23 Score=36.37 Aligned_cols=149 Identities=15% Similarity=0.134 Sum_probs=73.5
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.+++.|+.+ ..+.+||..+.+....... . ...-.++.+. ++..++.|+.+ ..+.++|+.+.+.
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~-h---~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~ 199 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQG-H---EQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQC 199 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECC-C---SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEcc-C---CCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCee
Confidence 35666666643 3688899988764433211 1 1112233332 55666667654 3678889988765
Q ss_pred EeeecCCCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceee-ccccCCCCCC-CCcceeeee--c
Q 006334 116 MRPECRGAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-PAVKGDIPVP-RDSHSSNVI--A 190 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-i~~~~~lP~~-R~~hs~v~~--~ 190 (650)
...-. . .....++.... ++.+++.|+.+ ..+.+||+.+..-.. +......... ...-..+.+ +
T Consensus 200 ~~~~~---~--~~~v~~~~~~~~~~~~l~~~s~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 200 SLTLS---I--EDGVTTVAVSPGDGKYIAAGSLD-------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp EEEEE---C--SSCEEEEEECSTTCCEEEEEETT-------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred EEEEE---c--CCCcEEEEEECCCCCEEEEEcCC-------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 43211 0 11122233333 57788888763 247888887764332 1100000000 011111222 4
Q ss_pred CEEEEEeccCCCCccCeEEEEECCCC
Q 006334 191 NRLFVYGGDCGDQYHGDIDMLDMNSL 216 (650)
Q Consensus 191 ~~Iyv~GG~~~~~~~n~v~~yd~~t~ 216 (650)
+.+++.|+.+ ..+..||+.+.
T Consensus 268 g~~l~s~s~d-----~~v~~wd~~~~ 288 (393)
T 1erj_A 268 GQSVVSGSLD-----RSVKLWNLQNA 288 (393)
T ss_dssp SSEEEEEETT-----SEEEEEEC---
T ss_pred CCEEEEEeCC-----CEEEEEECCCC
Confidence 5667777755 46778887653
No 190
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=88.65 E-value=20 Score=39.94 Aligned_cols=177 Identities=10% Similarity=-0.022 Sum_probs=86.6
Q ss_pred CCEEEEEccCCCC----cccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCC
Q 006334 37 HGAVYIFGGCCGG----LHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 37 ~~~IyvfGG~~~~----~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
+++.++++..... .....++++|..+.....+..... ...+....+..-+++.++|+.. ++++++|..+
T Consensus 71 Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-~~~~~~~~~~SPdG~~la~~~~------~~i~~~~~~~ 143 (723)
T 1xfd_A 71 DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV-SNAKLQYAGWGPKGQQLIFIFE------NNIYYCAHVG 143 (723)
T ss_dssp TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC-CSCCCSBCCBCSSTTCEEEEET------TEEEEESSSS
T ss_pred CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc-ccccccccEECCCCCEEEEEEC------CeEEEEECCC
Confidence 4555555553322 224789999999887655543211 1111222233336665555543 4799999888
Q ss_pred CcEEeeecCCCCCC---------------CCcccEEEEEcCCEEEEEccccCCC--------------------------
Q 006334 113 KEWMRPECRGAPPS---------------PRESHTATLVGDDKMVIFGGSGEGE-------------------------- 151 (650)
Q Consensus 113 ~~W~~l~~~~~~P~---------------~R~~hs~~~~~~~~Lyv~GG~~~~~-------------------------- 151 (650)
.+...+...+.... .+ ..+.....+++.++++..+...
T Consensus 144 g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~-~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 222 (723)
T 1xfd_A 144 KQAIRVVSTGKEGVIYNGLSDWLYEEEILKT-HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG 222 (723)
T ss_dssp SCCEEEECCCBTTTEEEEECCHHHHHTTSSS-SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred CceEEEecCCCCCceECcccceeEEEEeccC-cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence 77665522111100 00 1234444566666665542210
Q ss_pred -CcccceEEEEecCCCce-eeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCeEEEEECCCCcEEEee
Q 006334 152 -ANYLNDLHVLDLKTMRW-ASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLA 222 (650)
Q Consensus 152 -~~~~~dv~~yd~~t~~W-t~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~ 222 (650)
......++++|+.+.+- ..+.....+.........+.+ +++++++..... .....++.+|+.+.+...+.
T Consensus 223 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~g~~~~~~ 296 (723)
T 1xfd_A 223 SENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA-QNVSILTLCDATTGVCTKKH 296 (723)
T ss_dssp SCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT-SCEEEEEEEETTTCCEEEEE
T ss_pred CCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC-CCeEEEEEEeCCCCcceEEE
Confidence 01123788888877652 333210000000111111222 566655543222 23357899999988766653
No 191
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=88.60 E-value=35 Score=38.14 Aligned_cols=191 Identities=9% Similarity=0.074 Sum_probs=92.4
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCc--EEE--eecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCC
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMV--WST--LATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~s--W~~--l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
..+++.|+.++ .+.++|+.+.. +.. ....+. ...-.++++ .++++++.|+.++ .+.++|+.+
T Consensus 395 ~~~l~s~s~D~-----~i~~W~~~~~~~~~~~~~~~~~~h---~~~v~~v~~s~~g~~l~sgs~Dg-----~v~vwd~~~ 461 (694)
T 3dm0_A 395 ADIIVSASRDK-----SIILWKLTKDDKAYGVAQRRLTGH---SHFVEDVVLSSDGQFALSGSWDG-----ELRLWDLAA 461 (694)
T ss_dssp CSEEEEEETTS-----EEEEEECCCSTTCSCEEEEEEECC---SSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CCEEEEEeCCC-----cEEEEEccCCCcccccccceecCC---CCcEEEEEECCCCCEEEEEeCCC-----cEEEEECCC
Confidence 46777777543 57777775432 111 001111 111122222 2677777787643 688889887
Q ss_pred CcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-c-
Q 006334 113 KEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-A- 190 (650)
Q Consensus 113 ~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~- 190 (650)
..-...- .+ ....-.++....++..++.|+.+ ..+.+||.....-..+.. .....+....++.+ .
T Consensus 462 ~~~~~~~-~~---h~~~v~~~~~s~~~~~l~s~s~D-------~~i~iwd~~~~~~~~~~~--~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 462 GVSTRRF-VG---HTKDVLSVAFSLDNRQIVSASRD-------RTIKLWNTLGECKYTISE--GGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp TEEEEEE-EC---CSSCEEEEEECTTSSCEEEEETT-------SCEEEECTTSCEEEEECS--STTSCSSCEEEEEECSC
T ss_pred CcceeEE-eC---CCCCEEEEEEeCCCCEEEEEeCC-------CEEEEEECCCCcceeecc--CCCCCCCcEEEEEEeCC
Confidence 6543310 11 11112233334466777777763 246777765432221110 11111111222222 1
Q ss_pred --CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 191 --NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 191 --~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
..+++.|+.+ ..+.+||+.+.+-...- .... ..-.+++. .++++++.|+.++ .+.+||+.+.+
T Consensus 529 ~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~~---~~h~-~~v~~v~~spdg~~l~sg~~Dg-----~i~iwd~~~~~ 594 (694)
T 3dm0_A 529 TLQPTIVSASWD-----KTVKVWNLSNCKLRSTL---AGHT-GYVSTVAVSPDGSLCASGGKDG-----VVLLWDLAEGK 594 (694)
T ss_dssp SSSCEEEEEETT-----SCEEEEETTTCCEEEEE---CCCS-SCEEEEEECTTSSEEEEEETTS-----BCEEEETTTTE
T ss_pred CCcceEEEEeCC-----CeEEEEECCCCcEEEEE---cCCC-CCEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCc
Confidence 2356666654 46888998876544322 0011 11122222 2457777777543 57888988775
Q ss_pred E
Q 006334 268 W 268 (650)
Q Consensus 268 W 268 (650)
-
T Consensus 595 ~ 595 (694)
T 3dm0_A 595 K 595 (694)
T ss_dssp E
T ss_pred e
Confidence 3
No 192
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=88.28 E-value=6.4 Score=40.29 Aligned_cols=152 Identities=10% Similarity=0.061 Sum_probs=74.9
Q ss_pred CEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCC-CCC-CCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecC
Q 006334 88 HKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGA-PPS-PRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLK 164 (650)
Q Consensus 88 ~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~-~P~-~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~ 164 (650)
+.+++.|+.++ .+.+||+.+.+....-.... ... ...-.++....++ .+++.|+.+.. ...+.+||+.
T Consensus 178 ~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----~~~i~~~d~~ 248 (416)
T 2pm9_A 178 AHVFASAGSSN-----FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN----DPSILIWDLR 248 (416)
T ss_dssp TTEEEEESSSS-----CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS----SCCCCEEETT
T ss_pred CcEEEEEcCCC-----CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC----CceEEEEeCC
Confidence 56777776543 58899998876543211100 000 1222333333333 56777765310 1257788887
Q ss_pred CCceeeccccCCCC--CCCCcceeeee--cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-E
Q 006334 165 TMRWASPAVKGDIP--VPRDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-I 239 (650)
Q Consensus 165 t~~Wt~i~~~~~lP--~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~ 239 (650)
+..-.. . .+. ....-.++... ++.+++.|+.+ ..+.+||+.+.+-...-. .. .... .+++. .
T Consensus 249 ~~~~~~-~---~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~~~~--~~-~~~v-~~~~~s~ 315 (416)
T 2pm9_A 249 NANTPL-Q---TLNQGHQKGILSLDWCHQDEHLLLSSGRD-----NTVLLWNPESAEQLSQFP--AR-GNWC-FKTKFAP 315 (416)
T ss_dssp STTSCS-B---CCCSCCSSCEEEEEECSSCSSCEEEEESS-----SEEEEECSSSCCEEEEEE--CS-SSCC-CCEEECT
T ss_pred CCCCCc-E---EeecCccCceeEEEeCCCCCCeEEEEeCC-----CCEEEeeCCCCccceeec--CC-CCce-EEEEECC
Confidence 643211 1 111 11111222222 56677777755 468899988765332211 11 1111 12222 2
Q ss_pred CC-EEEEEeccCCCcccCeEEEEECCCC
Q 006334 240 GT-KVYIIGGVGDKHYYNDIWILNVSTC 266 (650)
Q Consensus 240 ~~-~IyI~GG~~~~~~~~dv~~yD~~t~ 266 (650)
++ .+++.|+.+ ..+.+||+.+.
T Consensus 316 ~~~~~l~s~~~d-----~~i~iw~~~~~ 338 (416)
T 2pm9_A 316 EAPDLFACASFD-----NKIEVQTLQNL 338 (416)
T ss_dssp TCTTEEEECCSS-----SEEEEEESCCC
T ss_pred CCCCEEEEEecC-----CcEEEEEccCC
Confidence 34 677777653 35788888764
No 193
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=88.01 E-value=16 Score=36.63 Aligned_cols=191 Identities=11% Similarity=0.031 Sum_probs=93.2
Q ss_pred ECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcc--eEEEEECCEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 36 SHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDS--HSAILWGHKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 36 ~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~--hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
.++.+++.||.++ .+.+||..+++-...-..+..-.-.+. ...+..++.+.++-. ...+..||..+.
T Consensus 46 ~d~~~l~sg~~Dg-----~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~------~~~~~~~~~~~~ 114 (343)
T 3lrv_A 46 YDKWVCMCRCEDG-----ALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYP------GNQITILDSKTN 114 (343)
T ss_dssp EEEEEEEEEEETT-----EEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEET------TTEEEEEETTTC
T ss_pred CCCCEEEEECCCC-----cEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEc------cCceEEeecCCc
Confidence 3567777787543 577888776543221111000000000 111122444544432 246777888777
Q ss_pred c-EEeeecCCCCCCCCcccEEEEEc--CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-
Q 006334 114 E-WMRPECRGAPPSPRESHTATLVG--DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI- 189 (650)
Q Consensus 114 ~-W~~l~~~~~~P~~R~~hs~~~~~--~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~- 189 (650)
. ....... ....-..+.... ++.+++.|+.+ ..+.+||+.+.+-..+. .......-.++...
T Consensus 115 ~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~s~s~d-------g~i~~wd~~~~~~~~~~---~~~~~~~i~~~~~~p 180 (343)
T 3lrv_A 115 KVLREIEVD----SANEIIYMYGHNEVNTEYFIWADNR-------GTIGFQSYEDDSQYIVH---SAKSDVEYSSGVLHK 180 (343)
T ss_dssp CEEEEEECC----CSSCEEEEECCC---CCEEEEEETT-------CCEEEEESSSSCEEEEE---CCCSSCCCCEEEECT
T ss_pred ceeEEeecC----CCCCEEEEEcCCCCCCCEEEEEeCC-------CcEEEEECCCCcEEEEE---ecCCCCceEEEEECC
Confidence 6 3232111 111122223233 56677778763 25888998877653322 11111112223332
Q ss_pred cCEEEEEeccCCCCccCeEEEEECCCCcEE--EeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCC
Q 006334 190 ANRLFVYGGDCGDQYHGDIDMLDMNSLTWS--RLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 190 ~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~--~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
++.+++.|+.+ ..+..||+.+.+-. .+.. .. ......+.+ ++.+++.|+ ++ .+.+||+.+
T Consensus 181 dg~~lasg~~d-----g~i~iwd~~~~~~~~~~~~~----~h-~~~v~~l~fs~~g~~l~s~~-~~-----~v~iwd~~~ 244 (343)
T 3lrv_A 181 DSLLLALYSPD-----GILDVYNLSSPDQASSRFPV----DE-EAKIKEVKFADNGYWMVVEC-DQ-----TVVCFDLRK 244 (343)
T ss_dssp TSCEEEEECTT-----SCEEEEESSCTTSCCEECCC----CT-TSCEEEEEECTTSSEEEEEE-SS-----BEEEEETTS
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCCCCccEEec----cC-CCCEEEEEEeCCCCEEEEEe-CC-----eEEEEEcCC
Confidence 46777777755 47899998876533 2221 01 112222332 456666665 22 689999987
Q ss_pred Cc
Q 006334 266 CS 267 (650)
Q Consensus 266 ~~ 267 (650)
..
T Consensus 245 ~~ 246 (343)
T 3lrv_A 245 DV 246 (343)
T ss_dssp ST
T ss_pred CC
Confidence 53
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=87.95 E-value=23 Score=39.34 Aligned_cols=243 Identities=14% Similarity=0.122 Sum_probs=116.6
Q ss_pred CEEEEEccCCCCcccceEEEEECC--CCcEEEeecCCCCCCCCcceEEEEE-----CC-EEEEEcccCCCcCcCeEEEEE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLD--TMVWSTLATTGQGPGPRDSHSAILW-----GH-KMIVFGGTNGYKKVNDLHILD 109 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~--t~sW~~l~~~g~~P~pR~~hsa~~~-----~~-~lyVfGG~~~~~~~ndv~~yD 109 (650)
.++|+.+. .+.+.+||+. +.+- +... +....-..+++. ++ .+|+..- ..+.+.++|
T Consensus 209 r~lyv~~~------dg~V~viD~~~~t~~~--v~~i---~~G~~P~~ia~s~~~~pDGk~l~v~n~-----~~~~v~ViD 272 (567)
T 1qks_A 209 RYLFVIGR------DGKVNMIDLWMKEPTT--VAEI---KIGSEARSIETSKMEGWEDKYAIAGAY-----WPPQYVIMD 272 (567)
T ss_dssp CEEEEEET------TSEEEEEETTSSSCCE--EEEE---ECCSEEEEEEECCSTTCTTTEEEEEEE-----ETTEEEEEE
T ss_pred CEEEEEcC------CCeEEEEECCCCCCcE--eEEE---ecCCCCceeEEccccCCCCCEEEEEEc-----cCCeEEEEE
Confidence 46676432 2479999995 4432 2211 111122233443 44 5666432 236788899
Q ss_pred CCCCcEEe-eecCCC-------CCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCC
Q 006334 110 LESKEWMR-PECRGA-------PPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPR 181 (650)
Q Consensus 110 ~~t~~W~~-l~~~~~-------~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R 181 (650)
..+.+-.+ +.+.+. .|.+|... ++...++..+++-=. ..+.++.+|..+.....+. .++..+
T Consensus 273 ~~t~~~~~~i~~~~~~~~~~~~~p~~rva~-i~~s~~~~~~vv~~~------~~g~v~~vd~~~~~~~~v~---~i~~~~ 342 (567)
T 1qks_A 273 GETLEPKKIQSTRGMTYDEQEYHPEPRVAA-ILASHYRPEFIVNVK------ETGKILLVDYTDLNNLKTT---EISAER 342 (567)
T ss_dssp TTTCCEEEEEECCEECTTTCCEESCCCEEE-EEECSSSSEEEEEET------TTTEEEEEETTCSSEEEEE---EEECCS
T ss_pred CCCCcEEEEEeccccccccccccCCCceEE-EEEcCCCCEEEEEec------CCCeEEEEecCCCccceee---eeeccc
Confidence 87765433 221110 12333332 222223333333211 1356888888765544333 233344
Q ss_pred Ccceeeee-cC-EEEEEeccCCCCccCeEEEEECCCCcEEEeeec-CCCCCcccceEEEEEC-CEEEEEeccCCCcccCe
Q 006334 182 DSHSSNVI-AN-RLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAII-GSSPGVRAGHAAINIG-TKVYIIGGVGDKHYYND 257 (650)
Q Consensus 182 ~~hs~v~~-~~-~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~-g~~P~~R~~~s~v~~~-~~IyI~GG~~~~~~~~d 257 (650)
.-|..... ++ .+|+.... .+.+.++|..+.+-...-.. +..|.+..+.....-+ +.+|+.+-.. ...
T Consensus 343 ~~~d~~~~pdgr~~~va~~~-----sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g----~~~ 413 (567)
T 1qks_A 343 FLHDGGLDGSHRYFITAANA-----RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG----DDS 413 (567)
T ss_dssp SEEEEEECTTSCEEEEEEGG-----GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS----SSE
T ss_pred cccCceECCCCCEEEEEeCC-----CCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCC----CCe
Confidence 55544433 23 44444332 36899999998875443334 4445543333332222 4677664322 246
Q ss_pred EEEEECCCCc-----EEEeecCCCCCCCcceeEEEEE--CCeEEEEcCCCCCCCCCCcEEEEecCCC
Q 006334 258 IWILNVSTCS-----WSQLDTCGQQPQGRFSHAAVVT--GSDIVIYGGCGEDERPLNELLVLQLGAE 317 (650)
Q Consensus 258 v~~yD~~t~~-----W~~l~~~~~~p~~R~~hsav~~--~~~lyV~GG~~~~~~~~~d~~~l~l~~~ 317 (650)
+.++|..+.. |+.+....-.. .....+... +..+||---.+.+....+.+.+||+...
T Consensus 414 Vsvid~~~~~~~~~~~kvv~~i~~~g--~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 414 VALIGTDPEGHPDNAWKILDSFPALG--GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEECCTTTCTTTBTSEEEEEECSC--SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEecCCCCCCccccCEEEEEEecCC--CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 8888877633 87766421111 111112223 2357775322111112457888888644
No 195
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=87.44 E-value=20 Score=35.18 Aligned_cols=200 Identities=10% Similarity=0.137 Sum_probs=89.6
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-C--CEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-G--HKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~--~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
+.+++.|+.+ ..+.++|..+..|..+..... ....-.++.+. + +.+++.|+.++ .+..+|+.+..
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~~~~~ 134 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEFKENG 134 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEBCSSS
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEEEeec--CCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEecCCC
Confidence 4566666654 357788888776654432211 01111222222 2 55677776543 56777776542
Q ss_pred -EEeeecCCCCCCCCcccEEEEEc-------------CCEEEEEccccCCCCcccceEEEEecCCC--ceeeccccCCCC
Q 006334 115 -WMRPECRGAPPSPRESHTATLVG-------------DDKMVIFGGSGEGEANYLNDLHVLDLKTM--RWASPAVKGDIP 178 (650)
Q Consensus 115 -W~~l~~~~~~P~~R~~hs~~~~~-------------~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~--~Wt~i~~~~~lP 178 (650)
+......+. . ..-.++.... ++++++.|+.+ ..+.+||+.+. .|.... .+.
T Consensus 135 ~~~~~~~~~h-~--~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D-------~~v~lwd~~~~~~~~~~~~---~l~ 201 (297)
T 2pm7_B 135 TTSPIIIDAH-A--IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-------NLVKIWKYNSDAQTYVLES---TLE 201 (297)
T ss_dssp CBCCEEEECC-S--SCEEEEEECCCC------------CCEEEEEETT-------SCEEEEEEETTTTEEEEEE---EEC
T ss_pred ceeeeeeecc-c--CccceEeecCCcccccccCCCCCCcceEEEEcCC-------CcEEEEEEcCCCceEEEEE---Eec
Confidence 211100000 0 0011111111 13577777763 24666776543 344322 111
Q ss_pred CCCCcceeeee-c----CEEEEEeccCCCCccCeEEEEECCC--CcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccC
Q 006334 179 VPRDSHSSNVI-A----NRLFVYGGDCGDQYHGDIDMLDMNS--LTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVG 250 (650)
Q Consensus 179 ~~R~~hs~v~~-~----~~Iyv~GG~~~~~~~n~v~~yd~~t--~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~ 250 (650)
.....-..+.+ . +.+++.|+.+ +.+.++|+.+ ..|...... .......-.+++. .++++++.||.+
T Consensus 202 ~H~~~V~~v~~sp~~~~~~~las~s~D-----~~v~iWd~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~las~~~D 275 (297)
T 2pm7_B 202 GHSDWVRDVAWSPTVLLRSYMASVSQD-----RTCIIWTQDNEQGPWKKTLLK-EEKFPDVLWRASWSLSGNVLALSGGD 275 (297)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEETT-----SCEEEEEESSTTSCCEEEESS-SSCCSSCEEEEEECSSSCCEEEEETT
T ss_pred CCCCceEEEEECCCCCCceEEEEEECC-----CcEEEEEeCCCCCccceeeee-cccCCCcEEEEEECCCCCEEEEEcCC
Confidence 11111112222 2 3677777765 3577777655 345543211 0011111122222 346777777754
Q ss_pred CCcccCeEEEEECC-CCcEEEeec
Q 006334 251 DKHYYNDIWILNVS-TCSWSQLDT 273 (650)
Q Consensus 251 ~~~~~~dv~~yD~~-t~~W~~l~~ 273 (650)
+ .+.+|+.. .+.|..+..
T Consensus 276 ~-----~v~lw~~~~~g~w~~~~~ 294 (297)
T 2pm7_B 276 N-----KVTLWKENLEGKWEPAGE 294 (297)
T ss_dssp S-----CEEEEEECTTSCEEEC--
T ss_pred C-----cEEEEEECCCCcEEeccc
Confidence 3 35556654 467987753
No 196
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=86.89 E-value=4.8 Score=46.21 Aligned_cols=108 Identities=11% Similarity=0.132 Sum_probs=60.8
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcC--CEEEEEccccCCCCcccceEEEEecC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGD--DKMVIFGGSGEGEANYLNDLHVLDLK 164 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~--~~Lyv~GG~~~~~~~~~~dv~~yd~~ 164 (650)
++++++.||.++ .+.+||....++..+...... ...-.++....+ +.+++.|+.+ ..+.+||+.
T Consensus 20 dg~~latg~~dg-----~I~vwd~~~~~~~~~~~l~~h--~~~V~~l~~s~~~~~~~l~s~s~D-------g~I~vwd~~ 85 (753)
T 3jro_A 20 YGKRLATCSSDK-----TIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSYD-------GKVLIWKEE 85 (753)
T ss_dssp SSCCEEEEETTT-----EEEEEEEETTEEEEEEEECCC--SSCEEEEEECCTTSCSEEEEEETT-------SCEEEEEEE
T ss_pred CCCeEEEEECCC-----cEEEEecCCCCCccceeccCC--cCceEEEEecCCCCCCEEEEEeCC-------CeEEEEECC
Confidence 456677776543 577788776666654222111 111122232233 6777888763 358889998
Q ss_pred CCceeeccccCCCCCCCCcceeeee--c--CEEEEEeccCCCCccCeEEEEECCCC
Q 006334 165 TMRWASPAVKGDIPVPRDSHSSNVI--A--NRLFVYGGDCGDQYHGDIDMLDMNSL 216 (650)
Q Consensus 165 t~~Wt~i~~~~~lP~~R~~hs~v~~--~--~~Iyv~GG~~~~~~~n~v~~yd~~t~ 216 (650)
++.|..+... ......-..+.+ + +.+++.|+.+ ..+..||+.+.
T Consensus 86 ~~~~~~~~~~---~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~ 133 (753)
T 3jro_A 86 NGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKEN 133 (753)
T ss_dssp TTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSS
T ss_pred CCcccccccc---cCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecC
Confidence 8887655421 111122222222 3 6678888765 47888888765
No 197
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=86.83 E-value=23 Score=34.11 Aligned_cols=187 Identities=13% Similarity=0.082 Sum_probs=86.3
Q ss_pred ECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 36 SHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 36 ~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
.++..++.|+.+ ..+.+||..+.......... ...-.++++ .++.+++.|+.++ .+..+|+....
T Consensus 27 ~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg-----~i~~~~~~~~~ 92 (313)
T 3odt_A 27 VDDSKVASVSRD-----GTVRLWSKDDQWLGTVVYTG----QGFLNSVCYDSEKELLLFGGKDT-----MINGVPLFATS 92 (313)
T ss_dssp EETTEEEEEETT-----SEEEEEEESSSEEEEEEEEC----SSCEEEEEEETTTTEEEEEETTS-----CEEEEETTCCT
T ss_pred cCCCEEEEEEcC-----CcEEEEECCCCEEEEEeecC----CccEEEEEECCCCCEEEEecCCC-----eEEEEEeeecC
Confidence 455556666643 36888888776544332221 111223333 3667777777644 45666665431
Q ss_pred -EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cC
Q 006334 115 -WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--AN 191 (650)
Q Consensus 115 -W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~ 191 (650)
...+. ........-..+.+ ++.+++.|+.+ ..+.+||.....+.. . .. ...-.++... ++
T Consensus 93 ~~~~~~---~~~~~~~~i~~~~~-~~~~l~~~~~d-------~~i~~~d~~~~~~~~-~---~~--~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 93 GEDPLY---TLIGHQGNVCSLSF-QDGVVISGSWD-------KTAKVWKEGSLVYNL-Q---AH--NASVWDAKVVSFSE 155 (313)
T ss_dssp TSCC-C---EECCCSSCEEEEEE-ETTEEEEEETT-------SEEEEEETTEEEEEE-E---CC--SSCEEEEEEEETTT
T ss_pred CCCccc---chhhcccCEEEEEe-cCCEEEEEeCC-------CCEEEEcCCcEEEec-c---cC--CCceeEEEEccCCC
Confidence 11110 00111111122223 45566677653 347777732222221 1 11 1111122222 46
Q ss_pred EEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 192 RLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 192 ~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
.+++.|+.+ ..+..||.... -..+. ..............++. ++.|+.+ ..+.+||+.+.+-
T Consensus 156 ~~l~~~~~d-----~~i~i~d~~~~-~~~~~---~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~~ 217 (313)
T 3odt_A 156 NKFLTASAD-----KTIKLWQNDKV-IKTFS---GIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGDV 217 (313)
T ss_dssp TEEEEEETT-----SCEEEEETTEE-EEEEC---SSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCCE
T ss_pred CEEEEEECC-----CCEEEEecCce-EEEEe---ccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchhh
Confidence 666777654 36788883322 11221 11112222223334567 6666543 3689999987653
No 198
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=86.79 E-value=8.9 Score=38.02 Aligned_cols=190 Identities=14% Similarity=0.151 Sum_probs=93.0
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-C---CEEEEEcccCCCcCcCeEEEEECCCC
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-G---HKMIVFGGTNGYKKVNDLHILDLESK 113 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~---~~lyVfGG~~~~~~~ndv~~yD~~t~ 113 (650)
..+++.|+... ....+.+||..+.........+. ...-.++.+. + +.+++.|+.++ .+..||..+.
T Consensus 31 ~~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~ 100 (357)
T 3i2n_A 31 AKFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIEK---AKPIKCGTFGATSLQQRYLATGDFGG-----NLHIWNLEAP 100 (357)
T ss_dssp SEEEEEEC--C--CCEEEEEEEECSSSEEEEEEEEE---SSCEEEEECTTCCTTTCCEEEEETTS-----CEEEECTTSC
T ss_pred ceEEEecCccC--CCcEEEEEeCCCCcccceeeecc---cCcEEEEEEcCCCCCCceEEEecCCC-----eEEEEeCCCC
Confidence 36766776421 12468889988887655433211 1111223332 2 47777777543 5778888766
Q ss_pred c--EEeeecCCCCCCCCcccEEEE------EcCCEEEEEccccCCCCcccceEEEEecCCCc--eeeccccCCCCCCCCc
Q 006334 114 E--WMRPECRGAPPSPRESHTATL------VGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR--WASPAVKGDIPVPRDS 183 (650)
Q Consensus 114 ~--W~~l~~~~~~P~~R~~hs~~~------~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~--Wt~i~~~~~lP~~R~~ 183 (650)
. ...+. ... ..-.++.. ..++.+++.|+.+ ..+.+||+.+.. ...+... .....+..
T Consensus 101 ~~~~~~~~---~~~--~~v~~~~~~~~~~~s~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~-~~~~~~~v 167 (357)
T 3i2n_A 101 EMPVYSVK---GHK--EIINAIDGIGGLGIGEGAPEIVTGSRD-------GTVKVWDPRQKDDPVANMEPV-QGENKRDC 167 (357)
T ss_dssp SSCSEEEC---CCS--SCEEEEEEESGGGCC-CCCEEEEEETT-------SCEEEECTTSCSSCSEEECCC-TTSCCCCE
T ss_pred CccEEEEE---ecc--cceEEEeeccccccCCCccEEEEEeCC-------CeEEEEeCCCCCCcceecccc-CCCCCCce
Confidence 4 22221 111 11111111 1246677777763 258888887654 2222200 00001122
Q ss_pred ceee-----eecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE----CCEEEEEeccCCCcc
Q 006334 184 HSSN-----VIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI----GTKVYIIGGVGDKHY 254 (650)
Q Consensus 184 hs~v-----~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~----~~~IyI~GG~~~~~~ 254 (650)
.+++ .-++.+++.|+.+ ..+..||+.+..-...... ...-.++... ++..++.|+.+
T Consensus 168 ~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~l~~~~~d---- 233 (357)
T 3i2n_A 168 WTVAFGNAYNQEERVVCAGYDN-----GDIKLFDLRNMALRWETNI-----KNGVCSLEFDRKDISMNKLVATSLE---- 233 (357)
T ss_dssp EEEEEECCCC-CCCEEEEEETT-----SEEEEEETTTTEEEEEEEC-----SSCEEEEEESCSSSSCCEEEEEEST----
T ss_pred EEEEEEeccCCCCCEEEEEccC-----CeEEEEECccCceeeecCC-----CCceEEEEcCCCCCCCCEEEEECCC----
Confidence 2222 1356677777654 4789999988765433211 1112233333 45667776543
Q ss_pred cCeEEEEECCC
Q 006334 255 YNDIWILNVST 265 (650)
Q Consensus 255 ~~dv~~yD~~t 265 (650)
..+.+||+.+
T Consensus 234 -g~i~i~d~~~ 243 (357)
T 3i2n_A 234 -GKFHVFDMRT 243 (357)
T ss_dssp -TEEEEEEEEE
T ss_pred -CeEEEEeCcC
Confidence 3577777754
No 199
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=86.48 E-value=44 Score=37.04 Aligned_cols=121 Identities=20% Similarity=0.301 Sum_probs=65.7
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEECCCCc--EEEeecCCCCCCC---CcceEEEEECCEEEEEcccCCCcCcCeEE
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMV--WSTLATTGQGPGP---RDSHSAILWGHKMIVFGGTNGYKKVNDLH 106 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~s--W~~l~~~g~~P~p---R~~hsa~~~~~~lyVfGG~~~~~~~ndv~ 106 (650)
+.++.++.||+.... +.++.+|..+.+ |+.-........+ ....+.++.+++||+... ...++
T Consensus 63 ~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~ 130 (582)
T 1flg_A 63 QAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVV 130 (582)
T ss_dssp CCEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEE
T ss_pred ccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEE
Confidence 446789999997653 249999987664 8764332110000 112334567899888431 24799
Q ss_pred EEECCCCc--EEeeecCCCCCCCC--cccEEEEEcCC------EEEEEccccCCCCcccceEEEEecCCC--ceee
Q 006334 107 ILDLESKE--WMRPECRGAPPSPR--ESHTATLVGDD------KMVIFGGSGEGEANYLNDLHVLDLKTM--RWAS 170 (650)
Q Consensus 107 ~yD~~t~~--W~~l~~~~~~P~~R--~~hs~~~~~~~------~Lyv~GG~~~~~~~~~~dv~~yd~~t~--~Wt~ 170 (650)
.+|..+.+ |+.-. . . +... ...+-++. ++ .|| +|... .+......++.||..+. .|+.
T Consensus 131 AlD~~TG~~~W~~~~-~-~-~~~~~~~~~sP~v~-~~~~~G~~~v~-vg~~~-~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 131 ALNKNTGKVVWKKKF-A-D-HGAGYTMTGAPTIV-KDGKTGKVLLI-HGSSG-DEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEESSSCCEEEEEEC-S-C-GGGTCBCCSCCEEE-ECTTTCCEEEE-ECCBC-GGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEECCCCCEEeeecC-C-C-CCcCcccccCCEEe-CCCcCCcEEEE-Eeccc-cccCCCCEEEEEECCCCCEEeec
Confidence 99998874 87631 1 1 1001 11122333 34 444 44321 11122457899998865 4864
No 200
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=86.46 E-value=26 Score=35.99 Aligned_cols=149 Identities=12% Similarity=0.172 Sum_probs=76.1
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
+++.++.|+.++ .+.++|+.+.+-...- .+ ....-.++....++..++.|+.+ ..+.+||+.+.
T Consensus 134 dg~~l~s~~~d~-----~i~iwd~~~~~~~~~~-~~---h~~~v~~~~~~p~~~~l~s~s~d-------~~v~iwd~~~~ 197 (393)
T 1erj_A 134 DGKFLATGAEDR-----LIRIWDIENRKIVMIL-QG---HEQDIYSLDYFPSGDKLVSGSGD-------RTVRIWDLRTG 197 (393)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEEE-CC---CSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTT
T ss_pred CCCEEEEEcCCC-----eEEEEECCCCcEEEEE-cc---CCCCEEEEEEcCCCCEEEEecCC-------CcEEEEECCCC
Confidence 577777777643 6788898887654321 11 11122334444456667777753 35888898877
Q ss_pred ceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecC-CC-CCcccceEEEEE--C
Q 006334 167 RWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIG-SS-PGVRAGHAAINI--G 240 (650)
Q Consensus 167 ~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g-~~-P~~R~~~s~v~~--~ 240 (650)
+....- .. .....+++.. ++.+++.|+.+ ..+..||+.+..-...-... .. .........+.+ +
T Consensus 198 ~~~~~~---~~--~~~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 198 QCSLTL---SI--EDGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp EEEEEE---EC--SSCEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred eeEEEE---Ec--CCCcEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 654321 11 1111122222 46777887765 36888998876543321100 00 001111222222 4
Q ss_pred CEEEEEeccCCCcccCeEEEEECCCC
Q 006334 241 TKVYIIGGVGDKHYYNDIWILNVSTC 266 (650)
Q Consensus 241 ~~IyI~GG~~~~~~~~dv~~yD~~t~ 266 (650)
+++++.|+.+ ..+.+||+.+.
T Consensus 268 g~~l~s~s~d-----~~v~~wd~~~~ 288 (393)
T 1erj_A 268 GQSVVSGSLD-----RSVKLWNLQNA 288 (393)
T ss_dssp SSEEEEEETT-----SEEEEEEC---
T ss_pred CCEEEEEeCC-----CEEEEEECCCC
Confidence 5677777654 35778887653
No 201
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=86.44 E-value=15 Score=36.63 Aligned_cols=111 Identities=10% Similarity=0.115 Sum_probs=56.4
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecC-CCCCCCCcceEEEEE---CCEEEEEcccCCCcCcCeEEEEECCC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATT-GQGPGPRDSHSAILW---GHKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~-g~~P~pR~~hsa~~~---~~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
++.+++.|+.+ ..+.+||+.++....+... +. ...-.++++. ++.+++.|+.++ .+.++|+.+
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH---~~~V~~v~~~~~~~~~~l~s~s~D~-----~v~iWd~~~ 90 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGH---EGPVWQVAWAHPMYGNILASCSYDR-----KVIIWREEN 90 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECC---SSCEEEEEECCGGGSSCEEEEETTS-----CEEEECCSS
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCC---CccEEEEEeCCCCCCCEEEEEECCC-----EEEEEECCC
Confidence 35666777754 3577788776654332221 11 1111223332 256777777643 477888887
Q ss_pred CcEEeeecCCCCCCCCcccEEEEEcC--CEEEEEccccCCCCcccceEEEEecCCC-cee
Q 006334 113 KEWMRPECRGAPPSPRESHTATLVGD--DKMVIFGGSGEGEANYLNDLHVLDLKTM-RWA 169 (650)
Q Consensus 113 ~~W~~l~~~~~~P~~R~~hs~~~~~~--~~Lyv~GG~~~~~~~~~~dv~~yd~~t~-~Wt 169 (650)
..|..+...... ...-.++....+ +.+++.|+.+ ..+.+||..+. .|.
T Consensus 91 ~~~~~~~~~~~h--~~~V~~v~~~p~~~g~~lasgs~D-------~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 91 GTWEKSHEHAGH--DSSVNSVCWAPHDYGLILACGSSD-------GAISLLTYTGEGQWE 141 (316)
T ss_dssp SCCCEEEEECCC--SSCCCEEEECCTTTCSCEEEECSS-------SCEEEEEECSSSCEE
T ss_pred CcceEEEEccCC--CCceEEEEECCCCCCcEEEEEcCC-------CCEEEEecCCCCCcc
Confidence 776543211111 111223333333 5677777763 24677777654 464
No 202
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=86.33 E-value=20 Score=40.52 Aligned_cols=197 Identities=11% Similarity=0.051 Sum_probs=98.5
Q ss_pred ccceEEEEECCCCcE--EEeecCCCCC-CCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCC--cEEeeecCCCC
Q 006334 51 HFGDVLMLNLDTMVW--STLATTGQGP-GPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESK--EWMRPECRGAP 124 (650)
Q Consensus 51 ~~~dv~~yD~~t~sW--~~l~~~g~~P-~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~--~W~~l~~~~~~ 124 (650)
....+|++++.+..= ..+-.. .. .+....++.. -+++.+++.-..+ ...+++|.+|+.+. .|+.+...
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~~~~~~~~l~~~--- 279 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGA--IPAQHHRYVGATVTEDDRFLLISAANS-TSGNRLYVKDLSQENAPLLTVQGD--- 279 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESC--SGGGCCSEEEEEECTTSCEEEEEEESS-SSCCEEEEEETTSTTCCCEEEECS---
T ss_pred CCcEEEEEECCCCcccceEEEec--CCCCCeEEEEEEEcCCCCEEEEEEccC-CCCcEEEEEECCCCCCceEEEeCC---
Confidence 345688887766532 111111 01 1222223322 3555444432221 22379999998776 67776211
Q ss_pred CCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC---ceeeccccCCCCCCCCcceeeeecCEEEEEeccCC
Q 006334 125 PSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM---RWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCG 201 (650)
Q Consensus 125 P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~---~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~ 201 (650)
.... ...+...++.||+....+. ....++.+|+.+. .|+.+.. .-. . .. .....++.|++..-.++
T Consensus 280 ~~~~--~~~~~~~g~~l~~~t~~~~----~~~~l~~~d~~~~~~~~~~~l~~--~~~-~-~~-~~s~~g~~lv~~~~~~g 348 (693)
T 3iuj_A 280 LDAD--VSLVDNKGSTLYLLTNRDA----PNRRLVTVDAANPGPAHWRDLIP--ERQ-Q-VL-TVHSGSGYLFAEYMVDA 348 (693)
T ss_dssp SSSC--EEEEEEETTEEEEEECTTC----TTCEEEEEETTSCCGGGCEEEEC--CCS-S-CE-EEEEETTEEEEEEEETT
T ss_pred CCce--EEEEeccCCEEEEEECCCC----CCCEEEEEeCCCCCccccEEEec--CCC-C-EE-EEEEECCEEEEEEEECC
Confidence 1111 1122233588888866421 2357889998763 4776441 111 1 11 33344566655433222
Q ss_pred CCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-EC-CEEEEEeccCCCcccCeEEEEECCCCcEEEeec
Q 006334 202 DQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IG-TKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDT 273 (650)
Q Consensus 202 ~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~-~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~ 273 (650)
...++++|+.......+. .|.......... .+ +.|++.. ........+|.||+.+++++.+..
T Consensus 349 ---~~~l~~~d~~g~~~~~l~----~p~~~~~~~~~~~~d~~~l~~~~--ss~~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 349 ---TARVEQFDYEGKRVREVA----LPGLGSVSGFNGKHDDPALYFGF--ENYAQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp ---EEEEEEECTTSCEEEEEC----CSSSSEEEECCCCTTCSCEEEEE--ECSSSCCEEEEECTTTCCEEEEEC
T ss_pred ---eeEEEEEECCCCeeEEee----cCCCceEEeeecCCCCCEEEEEe--cCCCCCCEEEEEECCCCeEEEEEe
Confidence 357899998876655554 222111111111 12 2344332 112234679999999999888765
No 203
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=86.25 E-value=6 Score=40.60 Aligned_cols=154 Identities=11% Similarity=0.121 Sum_probs=74.5
Q ss_pred EEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEec
Q 006334 84 ILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDL 163 (650)
Q Consensus 84 ~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~ 163 (650)
++..+..++.|+.++ .+.++|+.+++-.........-....-.++....++++++.|+.+ ..+.++|+
T Consensus 89 ~~s~d~~l~~~s~dg-----~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-------~~i~iwd~ 156 (344)
T 4gqb_B 89 TWVGERGILVASDSG-----AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-------ICIKVWDL 156 (344)
T ss_dssp EEETTTEEEEEETTS-----EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-------SCEEEEET
T ss_pred EEeCCCeEEEEECCC-----EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-------CeEEEEEC
Confidence 344444455665533 577888877642211000000001112233444567888888764 24788898
Q ss_pred CCCceeeccccCCCCCCCCcceeeee---cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-E
Q 006334 164 KTMRWASPAVKGDIPVPRDSHSSNVI---ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-I 239 (650)
Q Consensus 164 ~t~~Wt~i~~~~~lP~~R~~hs~v~~---~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~ 239 (650)
.+++-... +......-..+.+ +..+++.|+.+ +.+.+||+.+.+-...- ..........++. .
T Consensus 157 ~~~~~~~~-----~~~h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 157 AQQVVLSS-----YRAHAAQVTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQI---GCSAPGYLPTSLAWH 223 (344)
T ss_dssp TTTEEEEE-----ECCCSSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEEC---C----CCCEEEEEEC
T ss_pred CCCcEEEE-----EcCcCCceEEEEecCCCCCceeeeccc-----cccccccccccceeeee---ecceeeccceeeeec
Confidence 87654321 1111111112222 23577777765 36888998876533221 0111111122222 2
Q ss_pred --CCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 240 --GTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 240 --~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
++++++.|+.+ ..+.+||+.+.+
T Consensus 224 p~~~~~l~sg~~d-----g~v~~wd~~~~~ 248 (344)
T 4gqb_B 224 PQQSEVFVFGDEN-----GTVSLVDTKSTS 248 (344)
T ss_dssp SSCTTEEEEEETT-----SEEEEEESCC--
T ss_pred CCCCcceEEeccC-----CcEEEEECCCCc
Confidence 34677887654 358889987653
No 204
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=86.18 E-value=29 Score=34.64 Aligned_cols=162 Identities=9% Similarity=0.113 Sum_probs=76.2
Q ss_pred EEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCC
Q 006334 34 CYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 34 v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
....+ +++.|+.+ ..+.+||..++.+..+...........-.++.+. ++.+++.|+.++ .+.++|...
T Consensus 21 ~~s~~-~las~~~D-----~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~-----~v~iw~~~~ 89 (330)
T 2hes_X 21 DFSQG-ILATGSTD-----RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS-----TVSIWAKEE 89 (330)
T ss_dssp EEETT-EEEEEESS-----SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS-----CEEEEEC--
T ss_pred ccCCC-EEEEEcCC-----CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC-----cEEEEEccc
Confidence 34455 66666644 3578888877655443322000011111223332 567777787654 456666643
Q ss_pred C-----cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCC--CceeeccccCCCCCCCCcce
Q 006334 113 K-----EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKT--MRWASPAVKGDIPVPRDSHS 185 (650)
Q Consensus 113 ~-----~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t--~~Wt~i~~~~~lP~~R~~hs 185 (650)
. .+..+..... ....-.++....++++++.|+.+ ..+.+||+.. ..+..+.. +......-.
T Consensus 90 ~~~~~~~~~~~~~~~~--h~~~V~~v~~sp~g~~las~s~D-------~~v~iwd~~~~~~~~~~~~~---~~~h~~~v~ 157 (330)
T 2hes_X 90 SADRTFEMDLLAIIEG--HENEVKGVAWSNDGYYLATCSRD-------KSVWIWETDESGEEYECISV---LQEHSQDVK 157 (330)
T ss_dssp -----CCCEEEEEEC------CEEEEEECTTSCEEEEEETT-------SCEEEEECCTTCCCCEEEEE---ECCCSSCEE
T ss_pred CcCccccceeEEEEcC--CCCcEEEEEECCCCCEEEEEeCC-------CEEEEEeccCCCCCeEEEEE---eccCCCceE
Confidence 2 2222211000 01111223333467777777763 2477888743 23433221 111111112
Q ss_pred eeee--cCEEEEEeccCCCCccCeEEEEECCCCcEEEeee
Q 006334 186 SNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAI 223 (650)
Q Consensus 186 ~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~ 223 (650)
.+.+ ++.+++.|+.+ ..+..+|..+..|..+..
T Consensus 158 ~v~~~p~~~~l~s~s~D-----~~i~iW~~~~~~~~~~~~ 192 (330)
T 2hes_X 158 HVIWHPSEALLASSSYD-----DTVRIWKDYDDDWECVAV 192 (330)
T ss_dssp EEEECSSSSEEEEEETT-----SCEEEEEEETTEEEEEEE
T ss_pred EEEECCCCCEEEEEcCC-----CeEEEEECCCCCeeEEEE
Confidence 2222 45677777765 367778877777776653
No 205
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=86.14 E-value=7.4 Score=37.07 Aligned_cols=152 Identities=15% Similarity=0.159 Sum_probs=80.5
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEECCCC--cE-EEeecC-CCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEE
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNLDTM--VW-STLATT-GQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHI 107 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~--sW-~~l~~~-g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~ 107 (650)
+++.+++.+|+|-| +.+|+++.... -+ ..+... ...|. ...++....++++|+|-| +.+|+
T Consensus 10 A~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg-------~~yw~ 74 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG-------DKHWV 74 (196)
T ss_dssp EEEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET-------TEEEE
T ss_pred EEEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC-------CEEEE
Confidence 34467899999998 46888864310 00 111111 12233 222222224688999987 67899
Q ss_pred EECCCCc---EEeeecCC-CCCCCCcccEEEEE-cCCEEEEEccccCCCCcccceEEEEecCCCceee-----ccccCCC
Q 006334 108 LDLESKE---WMRPECRG-APPSPRESHTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-----PAVKGDI 177 (650)
Q Consensus 108 yD~~t~~---W~~l~~~~-~~P~~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-----i~~~~~l 177 (650)
|+..+.. =+.+.... .+|... --++... .++++|+|-|. ..|+||..+++-.. +..-..+
T Consensus 75 ~~~~~~~~gyPk~I~~~~~glP~~~-IDAA~~~~~~g~~yfFkG~---------~yw~yd~~~~~v~~gyPk~i~~~~gi 144 (196)
T 3c7x_A 75 FDEASLEPGYPKHIKELGRGLPTDK-IDAALFWMPNGKTYFFRGN---------KYYRFNEELRAVDSEYPKNIKVWEGI 144 (196)
T ss_dssp EETTEECTTCSEEGGGTCBSCCSSC-CSEEEEETTTTEEEEEETT---------EEEEEETTTTEECTTCSEEGGGSBTC
T ss_pred EeCCcccCCCCeEhhhcCCCCCCCc-ccEEEEEccCCEEEEEECC---------EEEEEeCCcccccCCCCccHHHCCCc
Confidence 9864311 11221111 123222 2333333 36899999774 48899986653321 1100122
Q ss_pred CCCCCcceeeee-cC-EEEEEeccCCCCccCeEEEEECCCCc
Q 006334 178 PVPRDSHSSNVI-AN-RLFVYGGDCGDQYHGDIDMLDMNSLT 217 (650)
Q Consensus 178 P~~R~~hs~v~~-~~-~Iyv~GG~~~~~~~n~v~~yd~~t~~ 217 (650)
| ..-.++... ++ ++|+|-| +..|+||..+.+
T Consensus 145 p--~~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 145 P--ESPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp C--SSCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred C--CCcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 2 222333333 44 8999988 688999987764
No 206
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=86.07 E-value=13 Score=40.49 Aligned_cols=110 Identities=10% Similarity=-0.001 Sum_probs=60.5
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
++.+++..+.. +.+.+||+.+.+.+.+... +. .......+++.+++++.+..+ ...++++|+.+.
T Consensus 121 g~~~~~~s~~~-----~~~~l~d~~~g~~~~l~~~---~~----~~~~~spDG~~la~~~~~~~~---~~~i~~~d~~~g 185 (582)
T 3o4h_A 121 GEAVVFTGATE-----DRVALYALDGGGLRELARL---PG----FGFVSDIRGDLIAGLGFFGGG---RVSLFTSNLSSG 185 (582)
T ss_dssp SSCEEEEEECS-----SCEEEEEEETTEEEEEEEE---SS----CEEEEEEETTEEEEEEEEETT---EEEEEEEETTTC
T ss_pred CCeEEEEecCC-----CCceEEEccCCcEEEeecC---CC----ceEEECCCCCEEEEEEEcCCC---CeEEEEEcCCCC
Confidence 34555554432 2334678888877665221 11 344444567777766653211 245999999988
Q ss_pred ceeeccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEE
Q 006334 167 RWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWS 219 (650)
Q Consensus 167 ~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~ 219 (650)
.+..+. ... ......+.. +++.++.+..++ ...++++|+++.+..
T Consensus 186 ~~~~l~---~~~--~~~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 186 GLRVFD---SGE--GSFSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVE 231 (582)
T ss_dssp CCEEEC---CSS--CEEEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEE
T ss_pred CceEee---cCC--CccccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEE
Confidence 887654 111 111222222 455444433222 247999999998887
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.85 E-value=17 Score=35.92 Aligned_cols=151 Identities=12% Similarity=-0.001 Sum_probs=78.3
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
++.||+..-. .+.+++||+.+.....+... ..-.+++...+++||+..+ +.+++||+++.
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~------~~~~~i~~~~dG~l~v~~~---------~~l~~~d~~~g 83 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTMD------APVSSVALRQSGGYVATIG---------TKFCALNWKEQ 83 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEECS------SCEEEEEEBTTSSEEEEET---------TEEEEEETTTT
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeCC------CceEEEEECCCCCEEEEEC---------CeEEEEECCCC
Confidence 4678876533 35799999998876544211 1123344445677666421 35899999998
Q ss_pred ceeeccccCC-CCCCCCcceeeeecCEEEEEeccCC------CCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE
Q 006334 167 RWASPAVKGD-IPVPRDSHSSNVIANRLFVYGGDCG------DQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI 239 (650)
Q Consensus 167 ~Wt~i~~~~~-lP~~R~~hs~v~~~~~Iyv~GG~~~------~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~ 239 (650)
+++.+..... .+..+....++.-++++|+..-... ......++++|+.. +...+... . .....++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~--~---~~pngi~~s 157 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQ--V---DISNGLDWS 157 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEE--E---SBEEEEEEC
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeec--c---ccccceEEc
Confidence 8876542211 1111222222222567776431111 12235789998763 34333211 1 111223332
Q ss_pred -C-CEEEEEeccCCCcccCeEEEEEC--CCCcE
Q 006334 240 -G-TKVYIIGGVGDKHYYNDIWILNV--STCSW 268 (650)
Q Consensus 240 -~-~~IyI~GG~~~~~~~~dv~~yD~--~t~~W 268 (650)
+ +.+|+... ....|++||+ .+...
T Consensus 158 pdg~~lyv~~~-----~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 158 LDHKIFYYIDS-----LSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp TTSCEEEEEEG-----GGTEEEEEEECTTTCCE
T ss_pred CCCCEEEEecC-----CCCcEEEEeccCCCCcc
Confidence 3 36777743 2357899987 45544
No 208
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=85.83 E-value=29 Score=38.51 Aligned_cols=201 Identities=14% Similarity=0.175 Sum_probs=105.2
Q ss_pred cceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCE-EEEEcccCCCcCcCeEEEEECCCCcEEeeecC-CCCCCCC
Q 006334 52 FGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHK-MIVFGGTNGYKKVNDLHILDLESKEWMRPECR-GAPPSPR 128 (650)
Q Consensus 52 ~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~-lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~-~~~P~~R 128 (650)
...+++.|..+.....+... +..++-|...+. +++ +|+... ..+.+.++|..+++-...-.. +..|.+.
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i---~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~ViD~~t~kl~~~i~vgg~~Phpg 390 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEI---SAERFLHDGGLDGSHRYFITAAN-----ARNKLVVIDTKEGKLVAIEDTGGQTPHPG 390 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEE---ECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEEEEEECSSSSBCCT
T ss_pred CCeEEEEecCCCccceeeee---eccccccCceECCCCCEEEEEeC-----CCCeEEEEECCCCcEEEEEeccCcCCCCc
Confidence 35788888887665554443 345666665554 344 444332 257899999999864432222 3444443
Q ss_pred cccEEEEEcC-CEEEEEccccCCCCcccceEEEEecCCCc-----eeeccccCCCCCCCCcceeeee--cCEEEEEeccC
Q 006334 129 ESHTATLVGD-DKMVIFGGSGEGEANYLNDLHVLDLKTMR-----WASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDC 200 (650)
Q Consensus 129 ~~hs~~~~~~-~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~-----Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~ 200 (650)
.+.. ....+ +.+|+.+-.. .+.+.++|.++.. |+.+....... .....+... +..+|+---..
T Consensus 391 ~g~~-~~~p~~g~v~~t~~~g------~~~Vsvid~~~~~~~~~~~kvv~~i~~~g--~g~~~i~~~p~~~~l~v~~~~~ 461 (567)
T 1qks_A 391 RGAN-FVHPTFGPVWATSHMG------DDSVALIGTDPEGHPDNAWKILDSFPALG--GGSLFIKTHPNSQYLYVDATLN 461 (567)
T ss_dssp TCEE-EEETTTEEEEEEEBSS------SSEEEEEECCTTTCTTTBTSEEEEEECSC--SCCCCEECCTTCSEEEEECTTC
T ss_pred ccee-eECCCCCcEEEeCCCC------CCeEEEecCCCCCCccccCEEEEEEecCC--CCCEEEEeCCCCCeEEEecCCC
Confidence 2322 23333 5677765332 1357788876633 87655221111 111112222 24688743211
Q ss_pred -CCCccCeEEEEECCCC-------cEEEeeec--CCC--CCcccceEEEEEC-CEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 201 -GDQYHGDIDMLDMNSL-------TWSRLAII--GSS--PGVRAGHAAINIG-TKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 201 -~~~~~n~v~~yd~~t~-------~W~~i~~~--g~~--P~~R~~~s~v~~~-~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
+....+++.+||..+. .+..++.. ..+ ...|..|....-+ +++|+.- ++.....+.|.+||.++.+
T Consensus 462 ~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~-~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 462 PEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSV-WNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp SSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEE-ECCTTSCCEEEEEETTTTE
T ss_pred CCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEe-ecCCCCCCcEEEEECCCce
Confidence 1123568999998765 24454320 011 1234445444333 4777662 2223345789999998876
Q ss_pred EEE
Q 006334 268 WSQ 270 (650)
Q Consensus 268 W~~ 270 (650)
-..
T Consensus 541 ~~~ 543 (567)
T 1qks_A 541 LKH 543 (567)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 209
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=85.82 E-value=5 Score=42.24 Aligned_cols=148 Identities=13% Similarity=0.091 Sum_probs=74.5
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEE-cCCEEEEEccccCCCCcccceEEEEecCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKT 165 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t 165 (650)
++.+++.|+.++ .+.++|+.+.....+.. .......-.++... .++.+++.|+.+ ..+.+||+.+
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~--~~gH~~~V~~l~f~p~~~~~l~s~s~D-------~~v~iwd~~~ 196 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIK--GIGAGGSITGLKFNPLNTNQFYASSME-------GTTRLQDFKG 196 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEEC--CCSSSCCCCEEEECSSCTTEEEEECSS-------SCEEEEETTS
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEE--ccCCCCCEEEEEEeCCCCCEEEEEeCC-------CEEEEeeccC
Confidence 456788887654 47778887665332210 00011112233333 245677777763 2477889887
Q ss_pred CceeeccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--C-C
Q 006334 166 MRWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--G-T 241 (650)
Q Consensus 166 ~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~-~ 241 (650)
+....+...... .....++... ++.+++.|+.+ ..+..||+....-..+. .......++.+ + +
T Consensus 197 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~~~~~~------~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 197 NILRVFASSDTI--NIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKELWNLR------MHKKKVTHVALNPCCD 263 (435)
T ss_dssp CEEEEEECCSSC--SCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCBCCCSB------CCSSCEEEEEECTTCS
T ss_pred CceeEEeccCCC--CccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcceeEEEe------cccceEEeeeecCCCc
Confidence 765543311111 1111222222 56777787765 36888888654322211 11112223333 2 3
Q ss_pred EEEEEeccCCCcccCeEEEEECCCC
Q 006334 242 KVYIIGGVGDKHYYNDIWILNVSTC 266 (650)
Q Consensus 242 ~IyI~GG~~~~~~~~dv~~yD~~t~ 266 (650)
.+++.|+.++ .+.+||+.+.
T Consensus 264 ~~~~s~s~d~-----~v~iwd~~~~ 283 (435)
T 4e54_B 264 WFLATASVDQ-----TVKIWDLRQV 283 (435)
T ss_dssp SEEEEEETTS-----BCCEEETTTC
T ss_pred eEEEEecCcc-----eeeEEecccc
Confidence 4666766543 4667887654
No 210
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=85.53 E-value=12 Score=37.00 Aligned_cols=105 Identities=13% Similarity=0.176 Sum_probs=53.4
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCc--EEEeecCCCCCCCCcceEEEE-----ECCEEEEEcccCCCcCcCeEEEEEC
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMV--WSTLATTGQGPGPRDSHSAIL-----WGHKMIVFGGTNGYKKVNDLHILDL 110 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~s--W~~l~~~g~~P~pR~~hsa~~-----~~~~lyVfGG~~~~~~~ndv~~yD~ 110 (650)
+.+++.|+.+ ..+.+||+.+.. ...+..... ...+.-.+++. .++.+++.|+.+ ..+..||+
T Consensus 129 ~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~ 197 (357)
T 3i2n_A 129 APEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQG-ENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLFDL 197 (357)
T ss_dssp CCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTT-SCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEEET
T ss_pred ccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCC-CCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEEEC
Confidence 4455555543 357888887654 233322111 11122223321 366777777653 36889999
Q ss_pred CCCcEEeeecCCCCCCCCcccEEEEEc---CCEEEEEccccCCCCcccceEEEEecCC
Q 006334 111 ESKEWMRPECRGAPPSPRESHTATLVG---DDKMVIFGGSGEGEANYLNDLHVLDLKT 165 (650)
Q Consensus 111 ~t~~W~~l~~~~~~P~~R~~hs~~~~~---~~~Lyv~GG~~~~~~~~~~dv~~yd~~t 165 (650)
.+.+-...... ...-.++.... ++.+++.|+.+ ..+.+||+.+
T Consensus 198 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~ 243 (357)
T 3i2n_A 198 RNMALRWETNI-----KNGVCSLEFDRKDISMNKLVATSLE-------GKFHVFDMRT 243 (357)
T ss_dssp TTTEEEEEEEC-----SSCEEEEEESCSSSSCCEEEEEEST-------TEEEEEEEEE
T ss_pred ccCceeeecCC-----CCceEEEEcCCCCCCCCEEEEECCC-------CeEEEEeCcC
Confidence 88764332111 11223333333 56677777653 3577788754
No 211
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=85.50 E-value=29 Score=34.02 Aligned_cols=222 Identities=9% Similarity=0.069 Sum_probs=103.3
Q ss_pred CCE-EEEEccCCCCcccceEEEEEC-CCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 37 HGA-VYIFGGCCGGLHFGDVLMLNL-DTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 37 ~~~-IyvfGG~~~~~~~~dv~~yD~-~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
++. +++.|+.+ ..+.+||+ .+.....+... +....-.++.+..+.+++.|+.+ ..+..+|+.+..
T Consensus 67 ~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~ 133 (342)
T 1yfq_A 67 NTDLQIYVGTVQ-----GEILKVDLIGSPSFQALTNN---EANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYG 133 (342)
T ss_dssp SSSEEEEEEETT-----SCEEEECSSSSSSEEECBSC---CCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHT
T ss_pred CCCcEEEEEcCC-----CeEEEEEeccCCceEecccc---CCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccc
Confidence 456 66667643 36889999 88776555431 01122223333335566666654 357777765400
Q ss_pred -------EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCC-Cc--eeeccccCCCCCCCCcc
Q 006334 115 -------WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKT-MR--WASPAVKGDIPVPRDSH 184 (650)
Q Consensus 115 -------W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t-~~--Wt~i~~~~~lP~~R~~h 184 (650)
.+.+ ........-.++. +..+. +++|+.+ ..+.+||+.+ .. ..... .+....-.
T Consensus 134 ~~~~~~~~~~~---~~~~~~~~v~~~~-~~~~~-l~~~~~d-------~~i~i~d~~~~~~~~~~~~~----~~~~~~i~ 197 (342)
T 1yfq_A 134 DGVIAVKNLNS---NNTKVKNKIFTMD-TNSSR-LIVGMNN-------SQVQWFRLPLCEDDNGTIEE----SGLKYQIR 197 (342)
T ss_dssp TBCEEEEESCS---SSSSSCCCEEEEE-ECSSE-EEEEEST-------TEEEEEESSCCTTCCCEEEE----CSCSSCEE
T ss_pred cccccccCCee---eEEeeCCceEEEE-ecCCc-EEEEeCC-------CeEEEEECCccccccceeee----cCCCCcee
Confidence 1111 1111111122333 33455 5555542 3588899877 33 22111 11111112
Q ss_pred eeeee--cCEEEEEeccCCCCccCeEEEEECCCC-------cEEEeeecCCCCC---cccceEEEEE--CCEEEEEeccC
Q 006334 185 SSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSL-------TWSRLAIIGSSPG---VRAGHAAINI--GTKVYIIGGVG 250 (650)
Q Consensus 185 s~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~-------~W~~i~~~g~~P~---~R~~~s~v~~--~~~IyI~GG~~ 250 (650)
++... ++.+++.|+.+ ..+.+||.... .-..+........ .......+.+ ++++++.|+.+
T Consensus 198 ~i~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 272 (342)
T 1yfq_A 198 DVALLPKEQEGYACSSID-----GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD 272 (342)
T ss_dssp EEEECSGGGCEEEEEETT-----SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT
T ss_pred EEEECCCCCCEEEEEecC-----CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC
Confidence 22333 45677777754 35566555433 1112221101000 0112222222 45667777643
Q ss_pred CCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCeEEEEcCCCC
Q 006334 251 DKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGCGE 301 (650)
Q Consensus 251 ~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~~~ 301 (650)
..+.+||+.+.+.... .. ......-.+++ -++.+++.||.+.
T Consensus 273 -----g~i~vwd~~~~~~~~~--~~-~~h~~~v~~~~-~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 273 -----GIISCWNLQTRKKIKN--FA-KFNEDSVVKIA-CSDNILCLATSDD 314 (342)
T ss_dssp -----SCEEEEETTTTEEEEE--CC-CCSSSEEEEEE-ECSSEEEEEEECT
T ss_pred -----ceEEEEcCccHhHhhh--hh-cccCCCceEec-CCCCeEEEEecCC
Confidence 3689999987764332 11 11011112333 6777888877543
No 212
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=85.10 E-value=38 Score=35.00 Aligned_cols=194 Identities=14% Similarity=0.096 Sum_probs=101.9
Q ss_pred eEEEEECCC--CcEEEeecCCCCCCCCcceEEEEE---CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCC-
Q 006334 54 DVLMLNLDT--MVWSTLATTGQGPGPRDSHSAILW---GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSP- 127 (650)
Q Consensus 54 dv~~yD~~t--~sW~~l~~~g~~P~pR~~hsa~~~---~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~- 127 (650)
-+++|+... .+|..+... +....-+++++. .+.||+.+..... -..+++.+-...+|+.+......+..
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~---~~~~~v~~i~~dp~~~~~l~~g~~~g~~--g~gl~~s~D~G~tW~~~~~~~~~~~~~ 106 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPV---FLGHTIHHIVQDPREPERMLMAARTGHL--GPTVFRSDDGGGNWTEATRPPAFNKAP 106 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEE---STTSEEEEEEECSSSTTCEEEEEEC--C--CEEEEEESSTTSCCEECSBCCCCCCCC
T ss_pred ceEEEECCCCCCCceECCcc---CCCCceEEEEECCCCCCeEEEEecCCCC--CccEEEeCCCCCCceECCccccCCCcc
Confidence 377887654 689986421 112233444443 4678876532110 12577776677899987432111111
Q ss_pred -C-------cccEEEEEc---CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCC--------------CCC
Q 006334 128 -R-------ESHTATLVG---DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPV--------------PRD 182 (650)
Q Consensus 128 -R-------~~hs~~~~~---~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~--------------~R~ 182 (650)
+ ...++++.. ++.||+.+-. .-+++.+-...+|+.+......|. ...
T Consensus 107 ~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~--------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 107 EGETGRVVDHVFWLTPGHASEPGTWYAGTSP--------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp ----CCCCCEEEEEEECCTTSTTCEEEEEET--------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred cccccccccceeEEEeCCCCCCCEEEEEecC--------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 1 111222221 4667664321 247777767789998652111121 111
Q ss_pred cceeeee---cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecC---CCCC-----cccceEEEEEC---CEEEEEec
Q 006334 183 SHSSNVI---ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIG---SSPG-----VRAGHAAINIG---TKVYIIGG 248 (650)
Q Consensus 183 ~hs~v~~---~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g---~~P~-----~R~~~s~v~~~---~~IyI~GG 248 (650)
.++++.. .+.||+.... ..+++.+-...+|+.+.... .+|. ....++++... +.||+..
T Consensus 179 i~~i~~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~- 251 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN- 251 (394)
T ss_dssp EEEEEECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE-
T ss_pred eeEEEECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc-
Confidence 2333332 2567775432 35888887788999885210 1121 12234444432 5666642
Q ss_pred cCCCcccCeEEEEECCCCcEEEeec
Q 006334 249 VGDKHYYNDIWILNVSTCSWSQLDT 273 (650)
Q Consensus 249 ~~~~~~~~dv~~yD~~t~~W~~l~~ 273 (650)
...+++.+-...+|+.+..
T Consensus 252 ------~~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 252 ------HCGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp ------TTEEEEEETTTTEEECGGG
T ss_pred ------CCeEEEeCCCCCcceECCC
Confidence 1358999988999999863
No 213
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=85.01 E-value=14 Score=38.66 Aligned_cols=156 Identities=8% Similarity=0.033 Sum_probs=84.3
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEECCCCcE--EEeecC-CCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEE
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVW--STLATT-GQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHI 107 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW--~~l~~~-g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~ 107 (650)
+++.+++.+|+|=| +.+|+++.....- ..+... ...|. ...++... .++++|+|=| +.+|+
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iDAa~~~~~~g~~~fFkg-------~~yWr 249 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPS-GIEAAYEIEARNQVFLFKD-------DKYWL 249 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCS-SCCEEEEEGGGTEEEEEET-------TEEEE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCC-CccEEEEecCCCEEEEEeC-------CEEEE
Confidence 34557899999988 3577776543221 111110 11231 22222222 2789999977 56888
Q ss_pred EECCCCc--E-EeeecCCCCCC-CCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceee-----ccc-cCC
Q 006334 108 LDLESKE--W-MRPECRGAPPS-PRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWAS-----PAV-KGD 176 (650)
Q Consensus 108 yD~~t~~--W-~~l~~~~~~P~-~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~-----i~~-~~~ 176 (650)
|+..... + +.+...+ .|. +..--++.... ++++|+|-|. ..|+||..+++-.. +.. -..
T Consensus 250 ~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~~~~yfFkG~---------~yw~yd~~~~~v~~gyPk~I~~~f~g 319 (365)
T 3ba0_A 250 ISNLRPEPNYPKSIHSFG-FPNFVKKIDAAVFNPRFYRTYFFVDN---------QYWRYDERRQMMDPGYPKLITKNFQG 319 (365)
T ss_dssp CSTTSCTTTCSEETTTTT-CCTTCCCCCEEEEETTTTEEEEEETT---------EEEEEETTTTEECSSCCCCHHHHSTT
T ss_pred EcCCcccCCCCceeeecc-CCCCCCCcCEEEEeCCCCEEEEEECC---------EEEEEeCCcceecCCCCcchhhcCCC
Confidence 8654221 1 1221111 222 11233444443 5899999763 48999976654321 100 012
Q ss_pred CCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEe
Q 006334 177 IPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRL 221 (650)
Q Consensus 177 lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i 221 (650)
+| ..--++... ++++|+|-| +..|+||..+.+-...
T Consensus 320 ~p--~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~~ 356 (365)
T 3ba0_A 320 IG--PKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITKT 356 (365)
T ss_dssp CC--SSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEEE
T ss_pred CC--CccceeeEecCCcEEEEeC-------CEEEEEECCccEEecc
Confidence 22 223344444 789999988 6899999988876654
No 214
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=84.77 E-value=19 Score=38.84 Aligned_cols=157 Identities=10% Similarity=0.005 Sum_probs=84.1
Q ss_pred EEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCC-CCcccEEEEEc-CCEEEEEccccCCCCcccceEE
Q 006334 82 SAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPS-PRESHTATLVG-DDKMVIFGGSGEGEANYLNDLH 159 (650)
Q Consensus 82 sa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~-~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~ 159 (650)
+++..++.+|+|=| +.+|+++.....+....+....|. |...-++.... ++++|+|=|. .+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~iDAa~~~~~~g~~~fFKg~---------~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGN---------KYW 330 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSSCCEEEEEGGGTEEEEEETT---------EEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCCeeEEEEEcCCCeEEEEeCC---------EEE
Confidence 45567899999987 467777765544433222222221 12223333332 6899999774 377
Q ss_pred EEecCCC--ce-eeccccCCCCC--CCCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEE-----eee-cCCC
Q 006334 160 VLDLKTM--RW-ASPAVKGDIPV--PRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR-----LAI-IGSS 227 (650)
Q Consensus 160 ~yd~~t~--~W-t~i~~~~~lP~--~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~-----i~~-~g~~ 227 (650)
+|+..+. .+ ..+...-.+|. .....+.... ++++|+|-| +..|+||..+.+-.. |.. -...
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fpgi 403 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGI 403 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCCCC
Confidence 7764221 01 00110002332 1222222222 589999988 689999976543221 110 0112
Q ss_pred CCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEE
Q 006334 228 PGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 228 P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~ 270 (650)
| ..--++...++++|+|-| +..|+||..+.+=..
T Consensus 404 p--~~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 404 G--HKVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRILT 437 (450)
T ss_dssp C--SCCSEEEEETTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred C--CCccEEEEcCCeEEEEeC-------CEEEEEECCcceEec
Confidence 2 222344456889999976 478999988776543
No 215
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=84.43 E-value=9.5 Score=37.98 Aligned_cols=155 Identities=6% Similarity=0.020 Sum_probs=82.6
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
+++||+.+..+ ..+++||+.+.++..+... ....-.+++...++++|+..... ......+++||+++.
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~---~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGD---FKSTGGIFAATENGD 122 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTT---SSSCCEEEEECTTSC
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCC---CCCCceEEEEeCCCC
Confidence 57788876432 4799999999887765211 11223344444567888765321 111246899998877
Q ss_pred ceeeccccCCCCCCCCcceeeee-cCEEEEEeccC-CCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CC-E
Q 006334 167 RWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDC-GDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GT-K 242 (650)
Q Consensus 167 ~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~-~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~-~ 242 (650)
....+.. .......-..++.. ++.+|+..... .......+++||+.+.+...+... . .....++.. ++ .
T Consensus 123 ~~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~---~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 123 NLQDIIE--DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--I---SVANGIALSTDEKV 195 (333)
T ss_dssp SCEEEEC--SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--E---SSEEEEEECTTSSE
T ss_pred EEEEEEc--cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--C---CcccceEECCCCCE
Confidence 6552211 11111111122222 46777754321 112235799999887776665421 0 111223332 33 5
Q ss_pred EEEEeccCCCcccCeEEEEECCC
Q 006334 243 VYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 243 IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
||+.... ...+++||+.+
T Consensus 196 l~v~~~~-----~~~i~~~d~~~ 213 (333)
T 2dg1_A 196 LWVTETT-----ANRLHRIALED 213 (333)
T ss_dssp EEEEEGG-----GTEEEEEEECT
T ss_pred EEEEeCC-----CCeEEEEEecC
Confidence 7776422 35799999964
No 216
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=84.04 E-value=9.7 Score=39.91 Aligned_cols=145 Identities=6% Similarity=0.072 Sum_probs=68.5
Q ss_pred EEEEcccCCCcCcCeEEEEECCCC---cEEeeecCCCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCC
Q 006334 90 MIVFGGTNGYKKVNDLHILDLESK---EWMRPECRGAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKT 165 (650)
Q Consensus 90 lyVfGG~~~~~~~ndv~~yD~~t~---~W~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t 165 (650)
+++.|+.++ .+.+||+.+. .+..............-..+.... ++.+++.|+.+ ..+.+||+.+
T Consensus 196 ~l~s~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-------g~i~i~d~~~ 263 (430)
T 2xyi_A 196 YLLSASDDH-----TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-------QKLMIWDTRN 263 (430)
T ss_dssp EEEEECTTS-----CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-------SEEEEEETTC
T ss_pred eEEEEeCCC-----eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-------CeEEEEECCC
Confidence 677776543 5788888762 121100000001111222333333 45677777653 3588999876
Q ss_pred Cc-eeeccccCCCCCCCCcceeeee---cCEEEEEeccCCCCccCeEEEEECCCCc--EEEeeecCCCCCcccceEEEEE
Q 006334 166 MR-WASPAVKGDIPVPRDSHSSNVI---ANRLFVYGGDCGDQYHGDIDMLDMNSLT--WSRLAIIGSSPGVRAGHAAINI 239 (650)
Q Consensus 166 ~~-Wt~i~~~~~lP~~R~~hs~v~~---~~~Iyv~GG~~~~~~~n~v~~yd~~t~~--W~~i~~~g~~P~~R~~~s~v~~ 239 (650)
.. ...+. .+........++.+ +..+++.|+.+ +.+.+||+.+.. -..+.. .......+.+
T Consensus 264 ~~~~~~~~---~~~~~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vwd~~~~~~~~~~~~~------h~~~v~~i~~ 329 (430)
T 2xyi_A 264 NNTSKPSH---TVDAHTAEVNCLSFNPYSEFILATGSAD-----KTVALWDLRNLKLKLHSFES------HKDEIFQVQW 329 (430)
T ss_dssp SCSSSCSE---EEECCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCTTSCSEEEEC------CSSCEEEEEE
T ss_pred CCCCccee---EeecCCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEeCCCCCCCeEEeec------CCCCEEEEEE
Confidence 52 11111 01001111122222 23478888765 468899987632 122220 0111222222
Q ss_pred ---CCEEEEEeccCCCcccCeEEEEECCC
Q 006334 240 ---GTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 240 ---~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
+..+++.|+.++ .+.+||+..
T Consensus 330 sp~~~~~l~s~~~d~-----~i~iwd~~~ 353 (430)
T 2xyi_A 330 SPHNETILASSGTDR-----RLHVWDLSK 353 (430)
T ss_dssp CSSCTTEEEEEETTS-----CCEEEEGGG
T ss_pred CCCCCCEEEEEeCCC-----cEEEEeCCC
Confidence 235777777543 577888865
No 217
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.96 E-value=14 Score=40.29 Aligned_cols=179 Identities=15% Similarity=-0.049 Sum_probs=93.2
Q ss_pred EEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEE
Q 006334 55 VLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTAT 134 (650)
Q Consensus 55 v~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~ 134 (650)
+++||+.+.....+... +. ...+..-+++.+++++.+... ...+|++|+.+.+++.+.. .. ......+
T Consensus 134 ~~l~d~~~g~~~~l~~~---~~---~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~~---~~--~~~~~~~ 201 (582)
T 3o4h_A 134 VALYALDGGGLRELARL---PG---FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDS---GE--GSFSSAS 201 (582)
T ss_dssp EEEEEEETTEEEEEEEE---SS---CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEECC---SS--CEEEEEE
T ss_pred ceEEEccCCcEEEeecC---CC---ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEeec---CC--Cccccce
Confidence 44778888877766543 22 223333467666666553222 2459999999998887621 11 1123344
Q ss_pred EEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCccee--------eeecCEEEEEeccCCCCccC
Q 006334 135 LVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSS--------NVIANRLFVYGGDCGDQYHG 206 (650)
Q Consensus 135 ~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~--------v~~~~~Iyv~GG~~~~~~~n 206 (650)
...|++.++.+..+ . ...++++|+++.....+. ..... ..... ..-++++|+.+..+ .
T Consensus 202 ~SpDG~~l~~~~~~---~--~~~i~~~d~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~spdg~~~~~~~~~-----g 267 (582)
T 3o4h_A 202 ISPGMKVTAGLETA---R--EARLVTVDPRDGSVEDLE---LPSKD-FSSYRPTAITWLGYLPDGRLAVVARRE-----G 267 (582)
T ss_dssp ECTTSCEEEEEECS---S--CEEEEEECTTTCCEEECC---CSCSH-HHHHCCSEEEEEEECTTSCEEEEEEET-----T
T ss_pred ECCCCCEEEEccCC---C--eeEEEEEcCCCCcEEEcc---CCCcC-hhhhhhccccceeEcCCCcEEEEEEcC-----C
Confidence 44566655533321 1 247999999988776222 11100 00011 12245676666544 2
Q ss_pred eEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEEe
Q 006334 207 DIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQL 271 (650)
Q Consensus 207 ~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l 271 (650)
.+.+|+. .+... .+.......... ++++++.++... ...++|.+|..+ +.+.+
T Consensus 268 ~~~l~~~--g~~~~------~~~~~v~~~~~s-dg~~l~~~s~~~--~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 268 RSAVFID--GERVE------APQGNHGRVVLW-RGKLVTSHTSLS--TPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEEEET--TEEEC------CCSSEEEEEEEE-TTEEEEEEEETT--EEEEEEEETTCC-EEECC
T ss_pred cEEEEEE--CCeec------cCCCceEEEEec-CCEEEEEEcCCC--CCCeEEEEcCCC-ceEEE
Confidence 5667776 43322 112111122233 778776655332 235788888765 44443
No 218
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=83.44 E-value=34 Score=33.06 Aligned_cols=184 Identities=14% Similarity=0.082 Sum_probs=79.5
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEE
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTA 133 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~ 133 (650)
.+.++|..+++-...... ......+....+.+++.|+.++ .+..++..+.........+ ........
T Consensus 90 ~v~iw~~~~~~~~~~~~~-----h~~~~~~~~~~~~~l~s~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 156 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTS-----HSARVGSLSWNSYILSSGSRSG-----HIHHHDVRVAEHHVATLSG---HSQEVCGL 156 (318)
T ss_dssp EEEEEETTTTEEEEEEEC-----CSSCEEEEEEETTEEEEEETTS-----EEEEEETTSSSCEEEEEEC---CSSCEEEE
T ss_pred cEEEeecCCceeEEEecC-----ccceEEEeecCCCEEEEEecCC-----ceEeeecCCCceeEEEEcC---ccCceEEE
Confidence 567777777654332221 1111222333455555555432 3444555444322211111 11112223
Q ss_pred EEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--c-CEEEEEeccCCCCccCeEEE
Q 006334 134 TLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--A-NRLFVYGGDCGDQYHGDIDM 210 (650)
Q Consensus 134 ~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~-~~Iyv~GG~~~~~~~n~v~~ 210 (650)
....++.+++.|+.+ ..+.+||+.+.+-..............-.+.... + +.+++.+|... ..+..
T Consensus 157 ~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~i~l 225 (318)
T 4ggc_A 157 RWAPDGRHLASGGND-------NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD----RHIRI 225 (318)
T ss_dssp EECTTSSEEEEEETT-------SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT----CEEEE
T ss_pred EEcCCCCEEEEEecC-------cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC----CEEEE
Confidence 333456677777653 2477888876432211000000000000111111 2 33444445332 46778
Q ss_pred EECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcE
Q 006334 211 LDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSW 268 (650)
Q Consensus 211 yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W 268 (650)
+|.....-...... ............++.+++.+|..+ ..+.+||+.+.+-
T Consensus 226 wd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~sg~~d----~~i~iwd~~~~~~ 276 (318)
T 4ggc_A 226 WNVCSGACLSAVDA---HSQVCSILWSPHYKELISGHGFAQ----NQLVIWKYPTMAK 276 (318)
T ss_dssp EETTTCCEEEEEEC---SSCEEEEEEETTTTEEEEEECTTT----CCEEEEETTTCCE
T ss_pred Eecccccccccccc---eeeeeeeeecccccceEEEEEcCC----CEEEEEECCCCcE
Confidence 88877665544321 111111112222346666655433 3588999887653
No 219
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=83.24 E-value=20 Score=34.06 Aligned_cols=152 Identities=15% Similarity=0.155 Sum_probs=80.3
Q ss_pred EEEEECCEEEEEcccCCCcCcCeEEEEECCC---CcEEeeecC-CCCCCCCcccEEEEEcCCEEEEEccccCCCCcccce
Q 006334 82 SAILWGHKMIVFGGTNGYKKVNDLHILDLES---KEWMRPECR-GAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLND 157 (650)
Q Consensus 82 sa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t---~~W~~l~~~-~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~d 157 (650)
+++..++++|+|-| +.+|+++... .-=..+... ..+|. .--++....++++|+|-|. .
T Consensus 10 A~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~--~iDAa~~~~~g~~yfFkg~---------~ 71 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA--SINTAYERKDGKFVFFKGD---------K 71 (196)
T ss_dssp EEEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS--SCCEEEECTTSCEEEEETT---------E
T ss_pred EEEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC--CccEEEEeCCCcEEEecCC---------E
Confidence 34467899999987 5788886431 100111100 12232 2223333356889999774 4
Q ss_pred EEEEecCCCce---eeccccC-CCCCCCCcceeee-ecCEEEEEeccCCCCccCeEEEEECCCCcEEE-----eeecCCC
Q 006334 158 LHVLDLKTMRW---ASPAVKG-DIPVPRDSHSSNV-IANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR-----LAIIGSS 227 (650)
Q Consensus 158 v~~yd~~t~~W---t~i~~~~-~lP~~R~~hs~v~-~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~-----i~~~g~~ 227 (650)
.|+|+..+... ..|.... .+|......+... .++++|+|-| +..|+||..+++-.. +..-..+
T Consensus 72 yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gi 144 (196)
T 3c7x_A 72 HWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGI 144 (196)
T ss_dssp EEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTC
T ss_pred EEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCc
Confidence 78887532211 0122111 2443223333322 2589999988 678999987654221 1100012
Q ss_pred CCcccceEEEEE-CC-EEEEEeccCCCcccCeEEEEECCCCc
Q 006334 228 PGVRAGHAAINI-GT-KVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 228 P~~R~~~s~v~~-~~-~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
|. .-.++... ++ ++|+|-| +..|+||..+.+
T Consensus 145 p~--~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 145 PE--SPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp CS--SCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred CC--CcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 21 22333333 44 8999976 478999987764
No 220
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=83.23 E-value=34 Score=32.98 Aligned_cols=153 Identities=10% Similarity=0.127 Sum_probs=80.4
Q ss_pred EEEEECCEEEEEcccCCCcCcCeEEEEECCCCc-EEeeecCCCCC-CCCcccEEEEE-cCCEEEEEccccCCCCcccceE
Q 006334 82 SAILWGHKMIVFGGTNGYKKVNDLHILDLESKE-WMRPECRGAPP-SPRESHTATLV-GDDKMVIFGGSGEGEANYLNDL 158 (650)
Q Consensus 82 sa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~-W~~l~~~~~~P-~~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv 158 (650)
+++..++++|+|=| +.+|+++..... .....+....| .+..--++... .++++|+|-|. ..
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~~IDAA~~~~~~~k~yfFkG~---------~y 98 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGN---------EY 98 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCSCCSEEEEETTTTEEEEEETT---------EE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCCCccEEEEECCCCEEEEEeCC---------EE
Confidence 44557899999987 467777655422 22211111111 11222333333 36899999774 48
Q ss_pred EEEecCCCc--e-eeccccCCCCCC-CCcceeee--ecCEEEEEeccCCCCccCeEEEEECCCCcEEE-----eee-cCC
Q 006334 159 HVLDLKTMR--W-ASPAVKGDIPVP-RDSHSSNV--IANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR-----LAI-IGS 226 (650)
Q Consensus 159 ~~yd~~t~~--W-t~i~~~~~lP~~-R~~hs~v~--~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~-----i~~-~g~ 226 (650)
|+||..+.. + ..|... .+|.. ..-.++.. .++++|+|-| +..|+||..+.+-.. +.. -..
T Consensus 99 W~y~~~~~~~gyPk~I~~~-g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g 170 (218)
T 1gen_A 99 WIYSASTLERGYPKPLTSL-GLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNA 170 (218)
T ss_dssp EEEETTEECTTCSEEGGGG-TCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSS
T ss_pred EEEcCccccCCCCccHhhc-CCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCC
Confidence 888842110 0 011111 22321 11223333 3689999988 689999987764221 110 011
Q ss_pred CCCcccceEEEEEC--CEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 227 SPGVRAGHAAINIG--TKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 227 ~P~~R~~~s~v~~~--~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
+| ..-.++.... +.+|+|-| +..|+||..+..
T Consensus 171 ~p--~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 171 IP--DNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp CC--SSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CC--CCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 22 2223444444 79999966 468888876554
No 221
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=83.14 E-value=61 Score=35.87 Aligned_cols=121 Identities=16% Similarity=0.110 Sum_probs=64.0
Q ss_pred EEEEECCEEEEEcccCCCcCcCeEEEEECCCCc--EEeeecCCCCCCCCc---ccEEEEEcCCEEEEEccccCCCCcccc
Q 006334 82 SAILWGHKMIVFGGTNGYKKVNDLHILDLESKE--WMRPECRGAPPSPRE---SHTATLVGDDKMVIFGGSGEGEANYLN 156 (650)
Q Consensus 82 sa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~--W~~l~~~~~~P~~R~---~hs~~~~~~~~Lyv~GG~~~~~~~~~~ 156 (650)
+-++.+++||+.... +.++.||..+.+ |+.-........+.+ ..+.++ .+++||+.. . -.
T Consensus 63 ~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~-~~~~v~~~t-~-------dg 127 (582)
T 1flg_A 63 QAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI-YGDKVFFGT-L-------DA 127 (582)
T ss_dssp CCEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE-ETTEEEEEE-T-------TT
T ss_pred ccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE-ECCEEEEEe-C-------CC
Confidence 335679999997653 249999998774 876311100000000 112233 368887742 1 13
Q ss_pred eEEEEecCCC--ceeeccccCCCCCCC--CcceeeeecC------EEEEEeccCCCCccCeEEEEECCCCc--EEE
Q 006334 157 DLHVLDLKTM--RWASPAVKGDIPVPR--DSHSSNVIAN------RLFVYGGDCGDQYHGDIDMLDMNSLT--WSR 220 (650)
Q Consensus 157 dv~~yd~~t~--~Wt~i~~~~~lP~~R--~~hs~v~~~~------~Iyv~GG~~~~~~~n~v~~yd~~t~~--W~~ 220 (650)
.++.+|.++. .|+.-. ..+... ...+.++.++ .||+-...........++.||..+.+ |+.
T Consensus 128 ~l~AlD~~TG~~~W~~~~---~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 128 SVVALNKNTGKVVWKKKF---ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEEEEESSSCCEEEEEEC---SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEEEEECCCCCEEeeecC---CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 6899998876 487522 111111 1123344566 56553211111234679999998765 865
No 222
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=82.83 E-value=53 Score=34.90 Aligned_cols=185 Identities=17% Similarity=0.283 Sum_probs=100.3
Q ss_pred CCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeecccc--CCCCC----CCCcc
Q 006334 111 ESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVK--GDIPV----PRDSH 184 (650)
Q Consensus 111 ~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~--~~lP~----~R~~h 184 (650)
..+.|++.+.. ..|..-.-|+.+.+. +.-|.+|=. .+ .....++-.+-. .+.|...... -.+|. .-...
T Consensus 268 ~~spW~~t~L~-~i~~vTe~HSFa~i~-~~~fa~GyH-nG-Dv~PRe~G~~yf-s~~~~sp~~~vrr~i~sey~~~AsEP 342 (670)
T 3ju4_A 268 HKSPWRKTDLG-LIPSVTEVHSFATID-NNGFAMGYH-QG-DVAPREVGLFYF-PDAFNSPSNYVRRQIPSEYEPDASEP 342 (670)
T ss_dssp TTSCCEEEECC-SCTTCSEEEEEEECS-SSCEEEEEE-EC-SSSSCEEEEEEE-TTTTTCTTCCEEEECCGGGCTTEEEE
T ss_pred ccCCceecccc-cccceeeeeeeeEec-CCceEEEec-cC-CCCcceeeEEEe-cccccCCcceeeeechhhhccccccc
Confidence 34568775443 445566778888885 444566543 21 112233322222 1223211100 01121 12233
Q ss_pred eeeeecCEEEEEe-ccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccC----------CCc
Q 006334 185 SSNVIANRLFVYG-GDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVG----------DKH 253 (650)
Q Consensus 185 s~v~~~~~Iyv~G-G~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~----------~~~ 253 (650)
++-++++.||+.- |......-..+.+-+.....|+.+... -..-......+.+++.|||||-.. +..
T Consensus 343 CvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp--~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~R 420 (670)
T 3ju4_A 343 CIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFP--HNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDR 420 (670)
T ss_dssp EEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECT--TCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCC
T ss_pred hhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheecc--ccccccCCCcceeCCEEEEEeccccccccccCCCccc
Confidence 4457799999886 555667778899999999999998731 111223344678899999998542 111
Q ss_pred ---ccCeEE--EEEC-----CCCcEEEeecC---CCCCCCcceeEEEEE-CCeE-EEEcCCCCC
Q 006334 254 ---YYNDIW--ILNV-----STCSWSQLDTC---GQQPQGRFSHAAVVT-GSDI-VIYGGCGED 302 (650)
Q Consensus 254 ---~~~dv~--~yD~-----~t~~W~~l~~~---~~~p~~R~~hsav~~-~~~l-yV~GG~~~~ 302 (650)
.+...+ +.++ +.-+|..+... +.+...-.+-+.+++ ++.| |||||.+..
T Consensus 421 Y~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~ 484 (670)
T 3ju4_A 421 YKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHF 484 (670)
T ss_dssp SSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSC
T ss_pred ccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccC
Confidence 122233 3333 33457776642 344444556666665 5665 699996543
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=82.80 E-value=50 Score=34.59 Aligned_cols=202 Identities=8% Similarity=-0.023 Sum_probs=105.5
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
++.||+.... .+.++++|+.++.-..+..... ..+ +++. ++.||+...... ..++++|..+..
T Consensus 141 ~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~~-----~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~ 205 (409)
T 3hrp_A 141 NNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGFK-----GGK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGW 205 (409)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTTEEEEEEETCC-----BCB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTT
T ss_pred CCCEEEEecC-----CCcEEEEECCCCEEEEeeccCC-----CCc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCc
Confidence 5788887652 2468999999887666544322 122 3332 345666543211 179999987653
Q ss_pred -EEeeecCCCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCc-c-eeeee-
Q 006334 115 -WMRPECRGAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDS-H-SSNVI- 189 (650)
Q Consensus 115 -W~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~-h-s~v~~- 189 (650)
...+... .......-+.+++.. ++.||+.-. ...+++||+.+.....+...+........ . .++..
T Consensus 206 ~~~~~g~~-~~~~~~~p~~iav~p~~g~lyv~d~--------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p 276 (409)
T 3hrp_A 206 APTRIGQL-GSTFSGKIGAVALDETEEWLYFVDS--------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYF 276 (409)
T ss_dssp CEEEEEEC-CTTSCSCCCBCEECTTSSEEEEECT--------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEET
T ss_pred eeEEeeec-cchhcCCcEEEEEeCCCCeEEEEEC--------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeC
Confidence 2222000 010122234455554 688888321 13699999987765544211111111222 1 33433
Q ss_pred -cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCC--------cc-cce-EEEEE-CCEEEEEeccCCCcccCe
Q 006334 190 -ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPG--------VR-AGH-AAINI-GTKVYIIGGVGDKHYYND 257 (650)
Q Consensus 190 -~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~--------~R-~~~-s~v~~-~~~IyI~GG~~~~~~~~d 257 (650)
++.||+.... .+.+++|+++.. ...+......+. .+ ... .++.. ++.||+.-.. ....
T Consensus 277 ~~g~lyv~d~~-----~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~----~~~~ 346 (409)
T 3hrp_A 277 VDSNFYMSDQN-----LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF----KGYC 346 (409)
T ss_dssp TTTEEEEEETT-----TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT----TTCE
T ss_pred CCCEEEEEeCC-----CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC----CCCE
Confidence 4789987432 357999998765 333332210000 01 112 23332 3578888420 2357
Q ss_pred EEEEECCCCcEEEee
Q 006334 258 IWILNVSTCSWSQLD 272 (650)
Q Consensus 258 v~~yD~~t~~W~~l~ 272 (650)
|++||+.+.....+.
T Consensus 347 I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 347 LRKLDILDGYVSTVA 361 (409)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEECCCCEEEEEe
Confidence 999997777666554
No 224
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=82.77 E-value=34 Score=33.67 Aligned_cols=141 Identities=9% Similarity=0.044 Sum_probs=70.8
Q ss_pred eEEEEECCCCcE-EeeecCCCCCCCCcccEEEEEcC----CEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCC
Q 006334 104 DLHILDLESKEW-MRPECRGAPPSPRESHTATLVGD----DKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIP 178 (650)
Q Consensus 104 dv~~yD~~t~~W-~~l~~~~~~P~~R~~hs~~~~~~----~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP 178 (650)
.+.+||..+... ..+...........-.++....+ +.+++.|+.+ ..+.+||+.+.+-...- . ..
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-------g~i~v~d~~~~~~~~~~-~-~~- 114 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR-------GIIRIINPITMQCIKHY-V-GH- 114 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT-------CEEEEECTTTCCEEEEE-E-SC-
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC-------CEEEEEEchhceEeeee-c-CC-
Confidence 577788776543 22221111111222333344434 5778888763 35888888765432211 0 11
Q ss_pred CCCCcceeeee--cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcc
Q 006334 179 VPRDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHY 254 (650)
Q Consensus 179 ~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~ 254 (650)
...-.++... ++.+++.|+.+ ..+..||+.+.+-...-. ...........+.+ ++..++.|+.+
T Consensus 115 -~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d---- 182 (366)
T 3k26_A 115 -GNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLVAIFG--GVEGHRDEVLSADYDLLGEKIMSCGMD---- 182 (366)
T ss_dssp -CSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEEEEEC--STTSCSSCEEEEEECTTSSEEEEEETT----
T ss_pred -CCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEEEEec--ccccccCceeEEEECCCCCEEEEecCC----
Confidence 1111122222 45677777765 478999998776443321 11111222223332 35667777654
Q ss_pred cCeEEEEECCCCc
Q 006334 255 YNDIWILNVSTCS 267 (650)
Q Consensus 255 ~~dv~~yD~~t~~ 267 (650)
..+.+||+.+.+
T Consensus 183 -g~i~i~d~~~~~ 194 (366)
T 3k26_A 183 -HSLKLWRINSKR 194 (366)
T ss_dssp -SCEEEEESCSHH
T ss_pred -CCEEEEECCCCc
Confidence 368888987653
No 225
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=82.21 E-value=35 Score=38.14 Aligned_cols=190 Identities=13% Similarity=0.104 Sum_probs=91.2
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.+++.|+.+ ..+.++|+.+..-...-.. . ...-.++++ .+++.++.|+.++ .+.++|.....-
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~~~-h---~~~v~~~~~s~~~~~l~s~s~D~-----~i~iwd~~~~~~ 506 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRRFVG-H---TKDVLSVAFSLDNRQIVSASRDR-----TIKLWNTLGECK 506 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEEC-C---SSCEEEEEECTTSSCEEEEETTS-----CEEEECTTSCEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeEEeC-C---CCCEEEEEEeCCCCEEEEEeCCC-----EEEEEECCCCcc
Confidence 35666666643 3688889887654332111 1 111122222 2566677777543 466666654422
Q ss_pred EeeecCCCCCCCCcccEEEEE-cCC--EEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--c
Q 006334 116 MRPECRGAPPSPRESHTATLV-GDD--KMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--A 190 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~-~~~--~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~ 190 (650)
..+. ......+..-..+.+ .++ .+++.|+.+ ..+.+||+.+.+-...- ......-..+.+ +
T Consensus 507 ~~~~--~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-------~~v~vwd~~~~~~~~~~-----~~h~~~v~~v~~spd 572 (694)
T 3dm0_A 507 YTIS--EGGEGHRDWVSCVRFSPNTLQPTIVSASWD-------KTVKVWNLSNCKLRSTL-----AGHTGYVSTVAVSPD 572 (694)
T ss_dssp EEEC--SSTTSCSSCEEEEEECSCSSSCEEEEEETT-------SCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTT
T ss_pred eeec--cCCCCCCCcEEEEEEeCCCCcceEEEEeCC-------CeEEEEECCCCcEEEEE-----cCCCCCEEEEEEeCC
Confidence 2221 111111111222223 222 456666653 24788888765443211 111111122222 4
Q ss_pred CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEE
Q 006334 191 NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWS 269 (650)
Q Consensus 191 ~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~ 269 (650)
+.+++.|+.+ ..+.+||+.+.+-... ......-.+++...+..+++++.+ ..+.+||+.+..-.
T Consensus 573 g~~l~sg~~D-----g~i~iwd~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~~-----~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 573 GSLCASGGKD-----GVVLLWDLAEGKKLYS-----LEANSVIHALCFSPNRYWLCAATE-----HGIKIWDLESKSIV 636 (694)
T ss_dssp SSEEEEEETT-----SBCEEEETTTTEEEEC-----CBCSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEEE
T ss_pred CCEEEEEeCC-----CeEEEEECCCCceEEE-----ecCCCcEEEEEEcCCCcEEEEEcC-----CCEEEEECCCCCCh
Confidence 6777777765 3688889877653221 111122233444444444444432 34889999887543
No 226
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=81.93 E-value=58 Score=34.77 Aligned_cols=172 Identities=5% Similarity=0.018 Sum_probs=81.1
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
+++.++.|+.+ ..+..||.....-..+.. . ...-.++....++++++.++.+ ..+.+||....
T Consensus 396 dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~~---~--~~~v~~~~~s~d~~~l~~~~~d-------~~v~~w~~~~~ 458 (577)
T 2ymu_A 396 DGQTIASASDD-----KTVKLWNRNGQLLQTLTG---H--SSSVWGVAFSPDDQTIASASDD-------KTVKLWNRNGQ 458 (577)
T ss_dssp TSSCEEEEETT-----SEEEEECTTCCEEEEEEC---C--SSCEEEEEECTTSSEEEEEETT-------SEEEEEETTSC
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCEEEEecC---C--CCCeEEEEECCCCCEEEEEcCC-------CEEEEEECCCC
Confidence 56667777654 356777754433332211 1 1112233334467777777753 24777786544
Q ss_pred ceeeccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEE
Q 006334 167 RWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYI 245 (650)
Q Consensus 167 ~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI 245 (650)
....+. .. ...-.+++.. ++++++.|+.+ ..+..||.....-..+... .......+...++++++
T Consensus 459 ~~~~~~---~~--~~~v~~~~~spd~~~las~~~d-----~~i~iw~~~~~~~~~~~~h----~~~v~~l~~s~dg~~l~ 524 (577)
T 2ymu_A 459 LLQTLT---GH--SSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGH----SSSVRGVAFSPDGQTIA 524 (577)
T ss_dssp EEEEEE---CC--SSCEEEEEECTTSCEEEEEETT-----SEEEEEETTSCEEEEEECC----SSCEEEEEECTTSSCEE
T ss_pred EEEEEc---CC--CCCEEEEEEcCCCCEEEEEeCC-----CEEEEEcCCCCEEEEEeCC----CCCEEEEEEcCCCCEEE
Confidence 333322 11 1111122222 56777777654 3678888655443333311 11111111223456777
Q ss_pred EeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCeEEEEcCC
Q 006334 246 IGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVT-GSDIVIYGGC 299 (650)
Q Consensus 246 ~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~-~~~lyV~GG~ 299 (650)
.|+.+ ..+.+||........+.. ...... ++++. +++.++.||.
T Consensus 525 s~~~d-----g~v~lwd~~~~~~~~~~~----h~~~v~-~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 525 SASDD-----KTVKLWNRNGQLLQTLTG----HSSSVW-GVAFSPDGQTIASASS 569 (577)
T ss_dssp EEETT-----SEEEEECTTSCEEEEEEC----CSSCEE-EEEECTTSSCEEEEET
T ss_pred EEECc-----CEEEEEeCCCCEEEEEcC----CCCCEE-EEEEcCCCCEEEEEeC
Confidence 77653 257788865544443321 111111 22232 5666666664
No 227
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=81.83 E-value=41 Score=32.91 Aligned_cols=185 Identities=9% Similarity=0.055 Sum_probs=91.2
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCc----EEEeecCCCCCCCCcceEEEE-ECCE-EEEEcccCCCcCcCeEEEEEC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMV----WSTLATTGQGPGPRDSHSAIL-WGHK-MIVFGGTNGYKKVNDLHILDL 110 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~s----W~~l~~~g~~P~pR~~hsa~~-~~~~-lyVfGG~~~~~~~ndv~~yD~ 110 (650)
++.+++.|+.+ ..+.+||..+.. ...+... ...-.++++ .+++ +++.|+.++ .+.+||+
T Consensus 22 ~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~wd~ 86 (342)
T 1yfq_A 22 SKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLRY-----KHPLLCCNFIDNTDLQIYVGTVQG-----EILKVDL 86 (342)
T ss_dssp GGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEEC-----SSCEEEEEEEESSSEEEEEEETTS-----CEEEECS
T ss_pred CCCEEEEEcCC-----CeEEEEEeCCCCccccceeeeec-----CCceEEEEECCCCCcEEEEEcCCC-----eEEEEEe
Confidence 34555666643 357788876665 3333221 111223333 3677 777777543 6889999
Q ss_pred -CCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc-------eeeccccCCCCCCCC
Q 006334 111 -ESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR-------WASPAVKGDIPVPRD 182 (650)
Q Consensus 111 -~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~-------Wt~i~~~~~lP~~R~ 182 (650)
.+.....+.. . .....-.++.... +.+++.|+.+ ..+.+||+.+.. ...+. .+.....
T Consensus 87 ~~~~~~~~~~~--~-~~~~~v~~l~~~~-~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~ 152 (342)
T 1yfq_A 87 IGSPSFQALTN--N-EANLGICRICKYG-DDKLIAASWD-------GLIEVIDPRNYGDGVIAVKNLNSN---NTKVKNK 152 (342)
T ss_dssp SSSSSEEECBS--C-CCCSCEEEEEEET-TTEEEEEETT-------SEEEEECHHHHTTBCEEEEESCSS---SSSSCCC
T ss_pred ccCCceEeccc--c-CCCCceEEEEeCC-CCEEEEEcCC-------CeEEEEcccccccccccccCCeee---EEeeCCc
Confidence 8877655421 0 0112223344444 6667777753 357788876400 22121 1222222
Q ss_pred cceeeeecCEEEEEeccCCCCccCeEEEEECCC-Cc--EEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCe
Q 006334 183 SHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNS-LT--WSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYND 257 (650)
Q Consensus 183 ~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t-~~--W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~d 257 (650)
-.++....+. ++.|+.+ ..+..||+.+ .. ...... +....-.+++.. ++++++.|+.++ .
T Consensus 153 v~~~~~~~~~-l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~----~~~~~i~~i~~~~~~~~~l~~~~~dg-----~ 217 (342)
T 1yfq_A 153 IFTMDTNSSR-LIVGMNN-----SQVQWFRLPLCEDDNGTIEES----GLKYQIRDVALLPKEQEGYACSSIDG-----R 217 (342)
T ss_dssp EEEEEECSSE-EEEEEST-----TEEEEEESSCCTTCCCEEEEC----SCSSCEEEEEECSGGGCEEEEEETTS-----E
T ss_pred eEEEEecCCc-EEEEeCC-----CeEEEEECCccccccceeeec----CCCCceeEEEECCCCCCEEEEEecCC-----c
Confidence 2233334455 5555543 4789999887 33 322221 111112223333 457777776532 4
Q ss_pred EEEEECCC
Q 006334 258 IWILNVST 265 (650)
Q Consensus 258 v~~yD~~t 265 (650)
+.+||+..
T Consensus 218 i~i~~~~~ 225 (342)
T 1yfq_A 218 VAVEFFDD 225 (342)
T ss_dssp EEEEECCT
T ss_pred EEEEEEcC
Confidence 55555543
No 228
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=81.44 E-value=15 Score=38.49 Aligned_cols=154 Identities=9% Similarity=0.042 Sum_probs=81.9
Q ss_pred EEEEECCEEEEEcccCCCcCcCeEEEEECCCCcE--EeeecC-CCCCCCCcccEEEEE-cCCEEEEEccccCCCCcccce
Q 006334 82 SAILWGHKMIVFGGTNGYKKVNDLHILDLESKEW--MRPECR-GAPPSPRESHTATLV-GDDKMVIFGGSGEGEANYLND 157 (650)
Q Consensus 82 sa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W--~~l~~~-~~~P~~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~d 157 (650)
+++..++++|+|=| +.+|+++.....- ..+... ..+| ...-++... .++++|+|-|. .
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP--~~iDAa~~~~~~g~~~fFkg~---------~ 246 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLP--SGIEAAYEIEARNQVFLFKDD---------K 246 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCC--SSCCEEEEEGGGTEEEEEETT---------E
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCC--CCccEEEEecCCCEEEEEeCC---------E
Confidence 34556899999877 4577776543211 111000 1222 222333333 36899999774 3
Q ss_pred EEEEecCCCc--ee-eccccCCCCCCC-Ccceeeee--cCEEEEEeccCCCCccCeEEEEECCCCcEEE-----eee-cC
Q 006334 158 LHVLDLKTMR--WA-SPAVKGDIPVPR-DSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR-----LAI-IG 225 (650)
Q Consensus 158 v~~yd~~t~~--Wt-~i~~~~~lP~~R-~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~-----i~~-~g 225 (650)
.|+|+..... +- .+... .+|..- .--++... ++++|+|-| +..|+||..+.+-.. |.. -.
T Consensus 247 yWr~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~ 318 (365)
T 3ba0_A 247 YWLISNLRPEPNYPKSIHSF-GFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQ 318 (365)
T ss_dssp EEECSTTSCTTTCSEETTTT-TCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHST
T ss_pred EEEEcCCcccCCCCceeeec-cCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCC
Confidence 7888643211 11 12211 233311 11223333 479999988 688999987654221 000 00
Q ss_pred CCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCCCcEEE
Q 006334 226 SSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 226 ~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~ 270 (650)
..| ..-.++... ++++|+|-| +..|+||..+.+-..
T Consensus 319 g~p--~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 319 GIG--PKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp TCC--SSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCC--CccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 111 222334444 789999966 479999998876654
No 229
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=81.27 E-value=22 Score=35.73 Aligned_cols=145 Identities=16% Similarity=0.079 Sum_probs=76.9
Q ss_pred CEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc
Q 006334 88 HKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR 167 (650)
Q Consensus 88 ~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~ 167 (650)
+.+|+++-. ...+++||+.++....+.. + ..-.+++...++++|+... +.+++||+.+.+
T Consensus 61 ~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~----~--~~v~~i~~~~dg~l~v~~~---------~gl~~~d~~~g~ 120 (326)
T 2ghs_A 61 GTAWWFNIL-----ERELHELHLASGRKTVHAL----P--FMGSALAKISDSKQLIASD---------DGLFLRDTATGV 120 (326)
T ss_dssp TEEEEEEGG-----GTEEEEEETTTTEEEEEEC----S--SCEEEEEEEETTEEEEEET---------TEEEEEETTTCC
T ss_pred CEEEEEECC-----CCEEEEEECCCCcEEEEEC----C--CcceEEEEeCCCeEEEEEC---------CCEEEEECCCCc
Confidence 678877643 2479999999887655421 1 1223444445788877531 248999998888
Q ss_pred eeeccccC-CCCCCCCcceeeeecCEEEEEec-cCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CC-EE
Q 006334 168 WASPAVKG-DIPVPRDSHSSNVIANRLFVYGG-DCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GT-KV 243 (650)
Q Consensus 168 Wt~i~~~~-~lP~~R~~hs~v~~~~~Iyv~GG-~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~-~I 243 (650)
+..+.... ..+..+....++.-++++|+... .........+++|| +.+...+... . ......+.. ++ .+
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~--~---~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD--I---SIPNSICFSPDGTTG 193 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE--E---SSEEEEEECTTSCEE
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC--C---cccCCeEEcCCCCEE
Confidence 77553111 11111111111222467776432 11112345799999 4666554321 0 111223332 34 57
Q ss_pred EEEeccCCCcccCeEEEEECC
Q 006334 244 YIIGGVGDKHYYNDIWILNVS 264 (650)
Q Consensus 244 yI~GG~~~~~~~~dv~~yD~~ 264 (650)
|+.... ...|++||+.
T Consensus 194 yv~~~~-----~~~I~~~d~~ 209 (326)
T 2ghs_A 194 YFVDTK-----VNRLMRVPLD 209 (326)
T ss_dssp EEEETT-----TCEEEEEEBC
T ss_pred EEEECC-----CCEEEEEEcc
Confidence 776321 3579999985
No 230
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=81.19 E-value=51 Score=33.63 Aligned_cols=119 Identities=10% Similarity=0.096 Sum_probs=58.0
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCC----CcCcCeEEEEECC
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNG----YKKVNDLHILDLE 111 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~----~~~~ndv~~yD~~ 111 (650)
.++|+.-........+.+++||..+.+-...-.. .... .+++. +..+|+..-... ....+.+..||+.
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~-----g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPT-----AFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEEEEC-----CEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEEecC-----CCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 4566654322222346899999988765432222 2222 33333 457888653211 1124568999998
Q ss_pred CCcE-EeeecCCCCC-CCCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecCCCce
Q 006334 112 SKEW-MRPECRGAPP-SPRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLKTMRW 168 (650)
Q Consensus 112 t~~W-~~l~~~~~~P-~~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~t~~W 168 (650)
+.+- ..+....... ....-+.+++..++ .||+.... ..+.+.+||+.+++-
T Consensus 90 t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~------~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 90 KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS------PATSIGIVDVAKGDY 143 (361)
T ss_dssp TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES------SSEEEEEEETTTTEE
T ss_pred CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC------CCCeEEEEECCCCcE
Confidence 7653 2332211000 01122334444444 55554221 024688888877644
No 231
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=80.55 E-value=53 Score=33.41 Aligned_cols=184 Identities=15% Similarity=0.132 Sum_probs=88.7
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCC--cceEEEE--ECCEEEEEcccCCCcCcCeEEEEECCCC--cEEeeecCCCCCCC
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPGPR--DSHSAIL--WGHKMIVFGGTNGYKKVNDLHILDLESK--EWMRPECRGAPPSP 127 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~pR--~~hsa~~--~~~~lyVfGG~~~~~~~ndv~~yD~~t~--~W~~l~~~~~~P~~ 127 (650)
.+.+||+.++.-........ +... .-.++.+ .++.+++.|+.++ .+..+|+... ....+. + . .
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~~wd~~~~~~~~~~~~--~-h--~ 249 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEF-PSGHTADVLSLSINSLNANMFISGSCDT-----TVRLWDLRITSRAVRTYH--G-H--E 249 (380)
T ss_dssp CEEEECTTTCCEEEEECCCS-SSSCCSCEEEEEECSSSCCEEEEEETTS-----CEEEEETTTTCCCCEEEC--C-C--S
T ss_pred cEEEEEcCCCcEEEEeeccc-CCCCccCeEEEEeecCCCCEEEEEECCC-----eEEEEECCCCCcceEEEC--C-c--C
Confidence 57888988876544321111 1111 1112222 2567888888654 5777887632 122211 1 0 1
Q ss_pred CcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCC-C-CCCCC-cceeee-ecCEEEEEeccCCCC
Q 006334 128 RESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGD-I-PVPRD-SHSSNV-IANRLFVYGGDCGDQ 203 (650)
Q Consensus 128 R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~-l-P~~R~-~hs~v~-~~~~Iyv~GG~~~~~ 203 (650)
..-.++....++..++.|+.+ ..+.+||+.+..-...-.... . ..... -.+++. .++.+++.|+.+
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D-------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d--- 319 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDD-------GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN--- 319 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSS-------SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT---
T ss_pred CCeEEEEEecCCCeEEEEcCC-------CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC---
Confidence 112334444567778888764 247888987764332110000 0 00001 112222 256677776654
Q ss_pred ccCeEEEEECCCCcEEE-eeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCC
Q 006334 204 YHGDIDMLDMNSLTWSR-LAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 204 ~~n~v~~yd~~t~~W~~-i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
..+.+||..+.+-.. +......-..+....+...++++++.|+.++ .+.+|++..
T Consensus 320 --g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~-----~i~iW~~~~ 375 (380)
T 3iz6_a 320 --GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK-----NLKIWAFSG 375 (380)
T ss_dssp --SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-----CEEEEECCS
T ss_pred --CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-----CEEEEecCC
Confidence 478899987765432 2110000111222222233567777877653 466666654
No 232
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=80.53 E-value=49 Score=32.97 Aligned_cols=106 Identities=11% Similarity=0.093 Sum_probs=58.5
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
++.+++.|+.++ .+..||+.+.+-..+.. ........++....++.+++.|+.+ ..+.+||+.+.
T Consensus 138 ~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~---~~~~~~i~~~~~~pdg~~lasg~~d-------g~i~iwd~~~~ 202 (343)
T 3lrv_A 138 NTEYFIWADNRG-----TIGFQSYEDDSQYIVHS---AKSDVEYSSGVLHKDSLLLALYSPD-------GILDVYNLSSP 202 (343)
T ss_dssp -CCEEEEEETTC-----CEEEEESSSSCEEEEEC---CCSSCCCCEEEECTTSCEEEEECTT-------SCEEEEESSCT
T ss_pred CCCEEEEEeCCC-----cEEEEECCCCcEEEEEe---cCCCCceEEEEECCCCCEEEEEcCC-------CEEEEEECCCC
Confidence 466777777543 57889998877644311 1112223445555577888888763 35889998876
Q ss_pred cee--eccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECCCCc
Q 006334 167 RWA--SPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMNSLT 217 (650)
Q Consensus 167 ~Wt--~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~ 217 (650)
.-. .+. ......-.++... ++..++.|+ + +.+..||+.+..
T Consensus 203 ~~~~~~~~----~~h~~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~ 246 (343)
T 3lrv_A 203 DQASSRFP----VDEEAKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDV 246 (343)
T ss_dssp TSCCEECC----CCTTSCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSST
T ss_pred CCCccEEe----ccCCCCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCC
Confidence 543 121 1001111122222 455666665 3 278899987653
No 233
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=79.73 E-value=26 Score=34.79 Aligned_cols=68 Identities=12% Similarity=0.250 Sum_probs=35.4
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-C--CEEEEEcccCCCcCcCeEEEEECCCC-
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-G--HKMIVFGGTNGYKKVNDLHILDLESK- 113 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~--~~lyVfGG~~~~~~~ndv~~yD~~t~- 113 (650)
+.+++-|+.+ ..+.++|..+..|..+..... ....-.++++. + +.+++.|+.++ .+..+|..+.
T Consensus 71 ~~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~--h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~~~~~ 138 (316)
T 3bg1_A 71 GNILASCSYD-----RKVIIWREENGTWEKSHEHAG--HDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTYTGEG 138 (316)
T ss_dssp SSCEEEEETT-----SCEEEECCSSSCCCEEEEECC--CSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEECSSS
T ss_pred CCEEEEEECC-----CEEEEEECCCCcceEEEEccC--CCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEecCCCC
Confidence 4555555543 357888888776654432211 01111233332 2 56777776543 4666776654
Q ss_pred cEEe
Q 006334 114 EWMR 117 (650)
Q Consensus 114 ~W~~ 117 (650)
.|..
T Consensus 139 ~~~~ 142 (316)
T 3bg1_A 139 QWEV 142 (316)
T ss_dssp CEEE
T ss_pred Ccce
Confidence 4654
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=78.96 E-value=31 Score=33.86 Aligned_cols=137 Identities=9% Similarity=0.184 Sum_probs=69.2
Q ss_pred EECCEEEEEcccCCCcCcCeEEEEECC-CCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEec
Q 006334 85 LWGHKMIVFGGTNGYKKVNDLHILDLE-SKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDL 163 (650)
Q Consensus 85 ~~~~~lyVfGG~~~~~~~ndv~~yD~~-t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~ 163 (650)
+.++.||+... ...++.||+. ...|.... +.. ...+.+...++.||+ |..+ ..+++||.
T Consensus 105 ~~~~~l~v~t~------~~~l~~~d~~g~~~~~~~~-----~~~-~~~~~~~~~~g~l~v-gt~~-------~~l~~~d~ 164 (330)
T 3hxj_A 105 IFEDILYVTSM------DGHLYAINTDGTEKWRFKT-----KKA-IYATPIVSEDGTIYV-GSND-------NYLYAINP 164 (330)
T ss_dssp EETTEEEEECT------TSEEEEECTTSCEEEEEEC-----SSC-CCSCCEECTTSCEEE-ECTT-------SEEEEECT
T ss_pred EECCEEEEEec------CCEEEEEcCCCCEEEEEcC-----CCc-eeeeeEEcCCCEEEE-EcCC-------CEEEEECC
Confidence 34888887431 2468999987 23476531 111 122233343567766 3321 35888998
Q ss_pred CC-CceeeccccCCCCCCCCcceeee-ecCEEEEEeccCCCCccCeEEEEECCC-CcEEEeeecCCCCCcccceEEEEE-
Q 006334 164 KT-MRWASPAVKGDIPVPRDSHSSNV-IANRLFVYGGDCGDQYHGDIDMLDMNS-LTWSRLAIIGSSPGVRAGHAAINI- 239 (650)
Q Consensus 164 ~t-~~Wt~i~~~~~lP~~R~~hs~v~-~~~~Iyv~GG~~~~~~~n~v~~yd~~t-~~W~~i~~~g~~P~~R~~~s~v~~- 239 (650)
.. ..|.... +.. ...+.+. .++.||+.. ..+++||... ..|.... .... ..+++..
T Consensus 165 ~g~~~~~~~~-----~~~-~~~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~-----~~~~-~~~~~~~~ 224 (330)
T 3hxj_A 165 DGTEKWRFKT-----NDA-ITSAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYA-----GYWT-VTRPAISE 224 (330)
T ss_dssp TSCEEEEEEC-----SSC-CCSCCEECTTCCEEEES--------SSEEEECTTSCEEEEECC-----SSCC-CSCCEECT
T ss_pred CCCEeEEEec-----CCC-ceeeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEcc-----CCcc-eeceEECC
Confidence 72 2365421 111 1222333 356777653 5789999442 3465432 1111 1223333
Q ss_pred CCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 240 GTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 240 ~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
++.||+.. ....+++||.....
T Consensus 225 ~g~l~v~t------~~~gl~~~~~~g~~ 246 (330)
T 3hxj_A 225 DGTIYVTS------LDGHLYAINPDGTE 246 (330)
T ss_dssp TSCEEEEE------TTTEEEEECTTSCE
T ss_pred CCeEEEEc------CCCeEEEECCCCCE
Confidence 34777752 12468888865544
No 235
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=78.46 E-value=50 Score=31.93 Aligned_cols=149 Identities=13% Similarity=0.207 Sum_probs=77.2
Q ss_pred ECCEEEEEccCCCCcccceEEEEEC------CCCcEEEeecC---CCCCC-C--CcceEEEE--ECCEEEEEcccCCCcC
Q 006334 36 SHGAVYIFGGCCGGLHFGDVLMLNL------DTMVWSTLATT---GQGPG-P--RDSHSAIL--WGHKMIVFGGTNGYKK 101 (650)
Q Consensus 36 ~~~~IyvfGG~~~~~~~~dv~~yD~------~t~sW~~l~~~---g~~P~-p--R~~hsa~~--~~~~lyVfGG~~~~~~ 101 (650)
.++.+|+|=| +.+|+++. ........... ...|. + ....-|++ .++++|+|=|
T Consensus 12 ~~ge~~fFk~-------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg------ 78 (225)
T 3oyo_A 12 SEYEVYFFAK-------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG------ 78 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET------
T ss_pred CCCEEEEEEC-------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC------
Confidence 3689999988 36888882 21112211111 11121 0 12222333 4799999987
Q ss_pred cCeEEEEECCCC----cEEe--eecCC---CCCCC---CcccEEEEE-cCCEEEEEccccCCCCcccceEEEEecCCCce
Q 006334 102 VNDLHILDLESK----EWMR--PECRG---APPSP---RESHTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRW 168 (650)
Q Consensus 102 ~ndv~~yD~~t~----~W~~--l~~~~---~~P~~---R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~W 168 (650)
+.+|+||..++ .... ..+.. .+|.. ..--++... .++++|+|-|. ..|+||..+++.
T Consensus 79 -~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~---------~yw~~d~~~~~~ 148 (225)
T 3oyo_A 79 -NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGN---------KYVRIAYDSKQL 148 (225)
T ss_dssp -TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETT---------EEEEEETTTTEE
T ss_pred -CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCC---------eEEEEECCCCee
Confidence 57999987432 1111 00110 11210 012233322 36899999874 488998665443
Q ss_pred eec--cccCCCC------CCCCcceeee--ecCEEEEEeccCCCCccCeEEEEECC
Q 006334 169 ASP--AVKGDIP------VPRDSHSSNV--IANRLFVYGGDCGDQYHGDIDMLDMN 214 (650)
Q Consensus 169 t~i--~~~~~lP------~~R~~hs~v~--~~~~Iyv~GG~~~~~~~n~v~~yd~~ 214 (650)
..- ......| .+..--++.. .++++|+|-| +..|+||..
T Consensus 149 ~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 149 VGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp EEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred cCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 320 0000112 1222334444 3689999988 688999987
No 236
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=78.40 E-value=22 Score=39.67 Aligned_cols=108 Identities=10% Similarity=-0.045 Sum_probs=55.7
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCc----CcCeEEEEECCCCcEEeeecCCCCCCCCc
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYK----KVNDLHILDLESKEWMRPECRGAPPSPRE 129 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~----~~ndv~~yD~~t~~W~~l~~~~~~P~~R~ 129 (650)
.++++|..+++-..+..............+..-+++.++++...... ...+++++|+.+.+.+.+...... ..+
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~-~~~- 115 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS-NAK- 115 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC-SCC-
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccc-ccc-
Confidence 68889988776554433211000012222233367766776543322 247899999998876555221110 000
Q ss_pred ccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeec
Q 006334 130 SHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASP 171 (650)
Q Consensus 130 ~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i 171 (650)
........+++.++++.. +.++++|..+.....+
T Consensus 116 ~~~~~~SPdG~~la~~~~--------~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFE--------NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp CSBCCBCSSTTCEEEEET--------TEEEEESSSSSCCEEE
T ss_pred ccccEECCCCCEEEEEEC--------CeEEEEECCCCceEEE
Confidence 112222335655555442 2588888877655544
No 237
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=78.14 E-value=54 Score=32.09 Aligned_cols=192 Identities=13% Similarity=0.050 Sum_probs=90.5
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++.+++.|+.+ ..+.+||..+..-...-.. . ...-.++++. ++.+++.|+.++ .+..+|..+..-
T Consensus 66 ~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~~~-h---~~~v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~~~ 131 (304)
T 2ynn_A 66 RKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEA-H---PDYIRSIAVHPTKPYVLSGSDDL-----TVKLWNWENNWA 131 (304)
T ss_dssp GGTEEEEEETT-----SEEEEEETTTCCEEEEEEC-C---SSCEEEEEECSSSSEEEEEETTS-----CEEEEEGGGTTE
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEEEeC-C---CCcEEEEEEcCCCCEEEEECCCC-----eEEEEECCCCcc
Confidence 34455555543 3588889887654322111 1 1112233332 566777777543 467778765421
Q ss_pred EeeecCCCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee---cC
Q 006334 116 MRPECRGAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI---AN 191 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~---~~ 191 (650)
......+ ....-.++.... ++.+++.|+.+ ..+.+||+.+..-.... .....+.-..+... ++
T Consensus 132 ~~~~~~~---h~~~v~~v~~~p~~~~~l~sgs~D-------~~v~iwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~ 198 (304)
T 2ynn_A 132 LEQTFEG---HEHFVMCVAFNPKDPSTFASGCLD-------RTVKVWSLGQSTPNFTL---TTGQERGVNYVDYYPLPDK 198 (304)
T ss_dssp EEEEECC---CCSCEEEEEECTTCTTEEEEEETT-------SEEEEEETTCSSCSEEE---ECCCTTCEEEEEECCSTTC
T ss_pred hhhhhcc---cCCcEEEEEECCCCCCEEEEEeCC-------CeEEEEECCCCCcccee---ccCCcCcEEEEEEEEcCCC
Confidence 1110011 111112223222 35677788764 35778887543211100 00001111111111 34
Q ss_pred EEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcEE
Q 006334 192 RLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSWS 269 (650)
Q Consensus 192 ~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~ 269 (650)
.+++.|+.+ ..+..||+.+.+-...- .+ .......+.+ ++.+++.|+.++ .+.+||+.+.+-.
T Consensus 199 ~~l~s~s~D-----~~i~iWd~~~~~~~~~~-~~----h~~~v~~~~~~p~~~~l~s~s~Dg-----~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 199 PYMITASDD-----LTIKIWDYQTKSCVATL-EG----HMSNVSFAVFHPTLPIIISGSEDG-----TLKIWNSSTYKVE 263 (304)
T ss_dssp CEEEEEETT-----SEEEEEETTTTEEEEEE-EC----CSSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCCccceee-CC----CCCCEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcee
Confidence 566666654 47889998876532211 01 1111222222 346777776543 5888898876644
Q ss_pred E
Q 006334 270 Q 270 (650)
Q Consensus 270 ~ 270 (650)
.
T Consensus 264 ~ 264 (304)
T 2ynn_A 264 K 264 (304)
T ss_dssp E
T ss_pred e
Confidence 3
No 238
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=77.00 E-value=60 Score=32.04 Aligned_cols=146 Identities=12% Similarity=0.123 Sum_probs=73.7
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
+++.++.|+.+ ..+.++|+.+.+-...- .+ ....-.++....++.+++.|+.+ ..+.+||+...
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~~~-~~---h~~~v~~~~~~~~~~~l~s~s~D-------~~i~vwd~~~~ 139 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQRF-VG---HKSDVMSVDIDKKASMIISGSRD-------KTIKVWTIKGQ 139 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEE-EC---CSSCEEEEEECTTSCEEEEEETT-------SCEEEEETTSC
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeEEE-cc---CCCcEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCC
Confidence 56677777754 36888898887543210 11 01112233333467778888764 24677787654
Q ss_pred ceeeccccCCCCCCCCcceeeee-------cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-
Q 006334 167 RWASPAVKGDIPVPRDSHSSNVI-------ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN- 238 (650)
Q Consensus 167 ~Wt~i~~~~~lP~~R~~hs~v~~-------~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~- 238 (650)
.-..+. .. ...-..+... ++.+++.|+.+ ..+..||+.+.+-...- .+ ....-.+++.
T Consensus 140 ~~~~~~---~h--~~~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~~-~~---h~~~v~~~~~s 205 (319)
T 3frx_A 140 CLATLL---GH--NDWVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEADF-IG---HNSNINTLTAS 205 (319)
T ss_dssp EEEEEC---CC--SSCEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEEEE-CC---CCSCEEEEEEC
T ss_pred eEEEEe---cc--CCcEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhheee-cC---CCCcEEEEEEc
Confidence 333221 00 0000111111 22356666654 46888898776543321 11 0011112222
Q ss_pred ECCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 239 IGTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 239 ~~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
.++++++.|+.+ ..+.+||+.+.+
T Consensus 206 p~g~~l~s~~~d-----g~i~iwd~~~~~ 229 (319)
T 3frx_A 206 PDGTLIASAGKD-----GEIMLWNLAAKK 229 (319)
T ss_dssp TTSSEEEEEETT-----CEEEEEETTTTE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCc
Confidence 245777777754 368889988765
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=76.71 E-value=1e+02 Score=34.58 Aligned_cols=75 Identities=13% Similarity=0.173 Sum_probs=44.4
Q ss_pred CeEEEEECCCCc--EEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCc--EEEeecCCCCCCCc
Q 006334 206 GDIDMLDMNSLT--WSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCS--WSQLDTCGQQPQGR 281 (650)
Q Consensus 206 n~v~~yd~~t~~--W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~--W~~l~~~~~~p~~R 281 (650)
..+..+|+.+.+ |+.-. ..++....++..++.+|+ |. .-..++.||.++.+ |+.-.. ...
T Consensus 438 g~l~A~D~~tG~~~W~~~~-----~~~~~~~~~~t~gg~vf~-g~-----~dg~l~a~d~~tG~~l~~~~~~-----~~~ 501 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPY-----PTHWNGGTLSTAGNLVFQ-GT-----AAGQMHAYSADKGEALWQFEAQ-----SGI 501 (668)
T ss_dssp EEEEEEETTTTEEEEEEEE-----SSSCCCCEEEETTTEEEE-EC-----TTSEEEEEETTTCCEEEEEECS-----SCC
T ss_pred ceEEEEeCCCCcEEEEccC-----CCCCcCceeEeCCCEEEE-EC-----CcccchhhhhhcChhheEecCC-----CCc
Confidence 678999998875 87643 233444556666677666 32 23579999998775 654321 111
Q ss_pred c-eeEEEEECCeEEEE
Q 006334 282 F-SHAAVVTGSDIVIY 296 (650)
Q Consensus 282 ~-~hsav~~~~~lyV~ 296 (650)
. ...+...++++||.
T Consensus 502 ~~~p~~~~~~G~~yva 517 (668)
T 1kv9_A 502 VAAPMTFELAGRQYVA 517 (668)
T ss_dssp CSCCEEEEETTEEEEE
T ss_pred ccCceEEEECCEEEEE
Confidence 1 11222467887764
No 240
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=76.06 E-value=77 Score=32.80 Aligned_cols=203 Identities=10% Similarity=0.010 Sum_probs=109.8
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcc
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRES 130 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~ 130 (650)
++++++|+.......+... ...-.++++. ++.||+.-- ..+.++++++.....+.+-..+ ...|
T Consensus 96 ~~I~~i~~~~~~~~~~~~~-----~~~~~gl~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~-~~~p--- 161 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN-----LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTG-LESP--- 161 (386)
T ss_dssp SCEEEECTTSCCCEEEECS-----CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCEEEEECSS-CSCC---
T ss_pred ccceeeccCCCcEEEEecC-----CCccEEEEEecCCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeCC-CCCc---
Confidence 4678888877766655432 1223444444 578988632 2367999999887765542211 1111
Q ss_pred cEEEEE-cCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCe
Q 006334 131 HTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGD 207 (650)
Q Consensus 131 hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~ 207 (650)
..+++. .++.||+.-.. .+.+++++++...-..+. ...+..| ..+++. ++.||+.--.. ...
T Consensus 162 ~glavd~~~g~lY~~d~~-------~~~I~~~~~dg~~~~~l~-~~~l~~P---~giavdp~~g~ly~td~~~----~~~ 226 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSG-------TSRIEVANLDGAHRKVLL-WQSLEKP---RAIALHPMEGTIYWTDWGN----TPR 226 (386)
T ss_dssp CCEEEETTTTEEEEEETT-------TTEEEECBTTSCSCEEEE-CSSCSCE---EEEEEETTTTEEEEEECSS----SCE
T ss_pred cEEEEEeCCCeEEEEcCC-------CCeEEEEeCCCCceEEee-cCCCCCC---cEEEEEcCCCeEEEeccCC----CCE
Confidence 233433 35889886432 236888887654333221 1122222 122332 57888864211 367
Q ss_pred EEEEECCCCcEEEeeecCCCCCcccceEEEE--ECCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeE
Q 006334 208 IDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN--IGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHA 285 (650)
Q Consensus 208 v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~--~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hs 285 (650)
+++++++...-..+... .+ ..-..+++ .+++||+.= .....|+++|+....-..+... .+ ..-.+
T Consensus 227 I~r~~~dG~~~~~~~~~-~~---~~PnGlavd~~~~~lY~aD-----~~~~~I~~~d~dG~~~~~~~~~-~~---~~P~g 293 (386)
T 3v65_B 227 IEASSMDGSGRRIIADT-HL---FWPNGLTIDYAGRRMYWVD-----AKHHVIERANLDGSHRKAVISQ-GL---PHPFA 293 (386)
T ss_dssp EEEEETTSCSCEEEECS-SC---SCEEEEEEEGGGTEEEEEE-----TTTTEEEEECTTSCSCEEEECS-SC---SSEEE
T ss_pred EEEEeCCCCCcEEEEEC-CC---CCeeeEEEeCCCCEEEEEE-----CCCCEEEEEeCCCCeeEEEEEC-CC---CCceE
Confidence 99999876544444311 11 11123333 357899983 2346799999875433333211 11 12245
Q ss_pred EEEECCeEEEEc
Q 006334 286 AVVTGSDIVIYG 297 (650)
Q Consensus 286 av~~~~~lyV~G 297 (650)
+++.++.||+.-
T Consensus 294 iav~~~~ly~td 305 (386)
T 3v65_B 294 ITVFEDSLYWTD 305 (386)
T ss_dssp EEEETTEEEEEE
T ss_pred EEEECCEEEEee
Confidence 666788898884
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=75.75 E-value=1.6 Score=45.62 Aligned_cols=142 Identities=14% Similarity=0.126 Sum_probs=55.7
Q ss_pred EECCEEEEEccCCCCcccceEEEEECCCCc--EEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCC
Q 006334 35 YSHGAVYIFGGCCGGLHFGDVLMLNLDTMV--WSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 35 ~~~~~IyvfGG~~~~~~~~dv~~yD~~t~s--W~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
+.++.||+.+. + ..++.+|..+++ |+.-. . . . ..+.++.++.+|+.|+.+ ..++.+|..+
T Consensus 7 v~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~-~-~----~-~s~p~~~~g~~~v~~s~d-----g~l~a~d~~t 68 (369)
T 2hz6_A 7 LPETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE-D-P----V-LQVPTHVEEPAFLPDPND-----GSLYTLGSKN 68 (369)
T ss_dssp -CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC-C-C----S-CCCC-----CCEEECTTT-----CCEEEC----
T ss_pred eeCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC-C-C----c-eecceEcCCCEEEEeCCC-----CEEEEEECCC
Confidence 44567776433 2 369999987664 76543 1 1 1 122234567788776433 3588999866
Q ss_pred C--cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC--ceeeccccCCCCCCCCcceeee
Q 006334 113 K--EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM--RWASPAVKGDIPVPRDSHSSNV 188 (650)
Q Consensus 113 ~--~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~--~Wt~i~~~~~lP~~R~~hs~v~ 188 (650)
. .|+.- ...+. ....+.++..++.|| +|+.+ ..++.+|..++ .|+.-. ... . ..+.
T Consensus 69 G~~~w~~~---~~~~~-~~~~sp~~~~~~~v~-~g~~d-------g~v~a~D~~tG~~~w~~~~---~~~-~----~~~p 128 (369)
T 2hz6_A 69 NEGLTKLP---FTIPE-LVQASPCRSSDGILY-MGKKQ-------DIWYVIDLLTGEKQQTLSS---AFA-D----SLSP 128 (369)
T ss_dssp -CCSEECS---CCHHH-HHTTCSCC-----CC-CCEEE-------EEEEEECCC--------------------------
T ss_pred Cceeeeee---ccCcc-ccccCceEecCCEEE-EEeCC-------CEEEEEECCCCcEEEEecC---CCc-c----cccc
Confidence 5 46542 01000 000111111234444 44431 35888998765 465321 100 0 0111
Q ss_pred ecCEEEEEeccCCCCccCeEEEEECCCCc--EEE
Q 006334 189 IANRLFVYGGDCGDQYHGDIDMLDMNSLT--WSR 220 (650)
Q Consensus 189 ~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~--W~~ 220 (650)
.++.+|+ |+.+ ..++.||+.+.+ |+.
T Consensus 129 ~~~~v~~-~~~d-----g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 129 STSLLYL-GRTE-----YTITMYDTKTRELRWNA 156 (369)
T ss_dssp ----EEE-EEEE-----EEEECCCSSSSSCCCEE
T ss_pred cCCEEEE-EecC-----CEEEEEECCCCCEEEeE
Confidence 3445554 3322 467888887654 775
No 242
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=75.46 E-value=61 Score=31.34 Aligned_cols=61 Identities=13% Similarity=0.230 Sum_probs=39.3
Q ss_pred cCEEEEEeccCCCCccCeEEEEECCCCcEEEee-ecC-CCCC------cccceEEEE--ECCEEEEEeccCCCcccCeEE
Q 006334 190 ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLA-IIG-SSPG------VRAGHAAIN--IGTKVYIIGGVGDKHYYNDIW 259 (650)
Q Consensus 190 ~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~-~~g-~~P~------~R~~~s~v~--~~~~IyI~GG~~~~~~~~dv~ 259 (650)
++++|+|-| +..|+||..+.+...-+ .+. ..|. +..-.++.. .++++|+|-| +..|
T Consensus 127 ~gk~yfFkG-------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~yw 192 (225)
T 3oyo_A 127 GKEVYLFKG-------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYV 192 (225)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEE
T ss_pred CCcEEEEeC-------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEE
Confidence 689999988 68999998776654311 110 1221 222334444 3689999976 4789
Q ss_pred EEECC
Q 006334 260 ILNVS 264 (650)
Q Consensus 260 ~yD~~ 264 (650)
+||..
T Consensus 193 r~d~~ 197 (225)
T 3oyo_A 193 RIDFT 197 (225)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99987
No 243
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=75.46 E-value=56 Score=34.84 Aligned_cols=120 Identities=14% Similarity=0.062 Sum_probs=60.9
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccC----CCcCcCeEEEEEC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTN----GYKKVNDLHILDL 110 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~----~~~~~ndv~~yD~ 110 (650)
.+++|+.-....... +.+.++|+.+++-...-..+. .. .+++. +..+||.--.. .....+.+.++|+
T Consensus 84 ~~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~I~vG~-----~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI-TQQFVIDGSTGRILGMTDGGF-----LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp TTEEEEEECTTTCSS-EEEEEEETTTTEEEEEEEECS-----SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCEEEEECCCcCCCC-CeEEEEECCCCEEEEEEECCC-----CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 356777654221111 789999999876543333322 22 23332 45688753110 0112468999999
Q ss_pred CCCcEEe-eecCCCCC--CCCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecCCCcee
Q 006334 111 ESKEWMR-PECRGAPP--SPRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLKTMRWA 169 (650)
Q Consensus 111 ~t~~W~~-l~~~~~~P--~~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt 169 (650)
.+.+-.. +...+... ....-+.+.+..++ +||+..-. ..+.+.++|+.+++-.
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~------~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS------PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS------SSCEEEEEETTTTEEE
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC------CCCeEEEEECCCCeEE
Confidence 9986533 32210000 01112334444444 66665311 1256888898876543
No 244
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=74.89 E-value=28 Score=33.73 Aligned_cols=142 Identities=20% Similarity=0.233 Sum_probs=73.5
Q ss_pred ECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCC---CCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEe
Q 006334 86 WGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRG---APPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLD 162 (650)
Q Consensus 86 ~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~---~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd 162 (650)
.++++|+|=| +.+|+++.....+....+.. .+| ..--++... ++++|+|-|. .+|+|+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP--~~IDAA~~~-~~~~yfFkG~---------~yw~~~ 87 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGP--STVDAAFSW-EDKLYLIQDT---------KVYVFL 87 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSC--SSCSEEEEE-TTEEEEEETT---------EEEEEE
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCC--CCccEEEEE-CCcEEEecCC---------EEEEEe
Confidence 4788999977 46777765433221111111 222 223344444 7999999774 488888
Q ss_pred cCCC-cee-----eccccCCCCCC----CCcceeee-ecCEEEEEeccCCCCccCeEEEEECCCC---cEEEeeecCCCC
Q 006334 163 LKTM-RWA-----SPAVKGDIPVP----RDSHSSNV-IANRLFVYGGDCGDQYHGDIDMLDMNSL---TWSRLAIIGSSP 228 (650)
Q Consensus 163 ~~t~-~Wt-----~i~~~~~lP~~----R~~hs~v~-~~~~Iyv~GG~~~~~~~n~v~~yd~~t~---~W~~i~~~g~~P 228 (650)
..++ +-. .+...-.+|.. +...++.. .++++|+|-| +..|+||..+. .|.... - +
T Consensus 88 ~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~---g-~ 156 (219)
T 1hxn_A 88 TKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELP---W-P 156 (219)
T ss_dssp CSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEEC---C-S
T ss_pred CCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCC---C-C
Confidence 6431 111 11100023322 12222222 2589999988 67899996542 343332 1 1
Q ss_pred CcccceEEEE-----------ECCEEEEEeccCCCcccCeEEEEECC
Q 006334 229 GVRAGHAAIN-----------IGTKVYIIGGVGDKHYYNDIWILNVS 264 (650)
Q Consensus 229 ~~R~~~s~v~-----------~~~~IyI~GG~~~~~~~~dv~~yD~~ 264 (650)
......++.. .++.+|+|-| +.-|+||..
T Consensus 157 p~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~~ 196 (219)
T 1hxn_A 157 HEKVDGALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRHV 196 (219)
T ss_dssp CSCCSEEEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESSH
T ss_pred CCCcCEEEEccccccccceeccCCeEEEEEC-------CEEEEEeCC
Confidence 2223333331 3467888866 356777654
No 245
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=73.69 E-value=84 Score=32.14 Aligned_cols=154 Identities=11% Similarity=0.097 Sum_probs=80.3
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
++.+++.|+.+ ..+..||+.+.+-...- .. .+....-.++....++.+++.|+.+ ..+.+||+.+.
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~-~~-~~h~~~v~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~~ 246 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQII-EN-SPRHGAVSSICIDEECCVLILGTTR-------GIIDIWDIRFN 246 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEE-EC-CGGGCCEEEEEECTTSCEEEEEETT-------SCEEEEETTTT
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEE-cc-CCCCCceEEEEECCCCCEEEEEcCC-------CeEEEEEcCCc
Confidence 46777777754 36889999887643321 11 1111222333334467778888763 35888998876
Q ss_pred ceeeccccCCCCCCCCcceeeee-----cCEEEEEeccCCCCccCeEEEEECCCCcEEEeee-cCC-C------C-----
Q 006334 167 RWASPAVKGDIPVPRDSHSSNVI-----ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAI-IGS-S------P----- 228 (650)
Q Consensus 167 ~Wt~i~~~~~lP~~R~~hs~v~~-----~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~-~g~-~------P----- 228 (650)
+....- .++....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-...-. ... . |
T Consensus 247 ~~~~~~---~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (437)
T 3gre_A 247 VLIRSW---SFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL 318 (437)
T ss_dssp EEEEEE---BCTTCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG
T ss_pred cEEEEE---ecCCCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc
Confidence 543211 01111001111111 23455555544 478899988765332211 000 0 0
Q ss_pred ---------CcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCc
Q 006334 229 ---------GVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 229 ---------~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
....-.+++..++.+++.||.++ .+.+||+.+.+
T Consensus 319 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~-----~i~~wd~~~~~ 361 (437)
T 3gre_A 319 EELNFCGIRSLNALSTISVSNDKILLTDEATS-----SIVMFSLNELS 361 (437)
T ss_dssp GGCCCCCCCSGGGGCCEEEETTEEEEEEGGGT-----EEEEEETTCGG
T ss_pred ccceecccccCCceEEEEECCceEEEecCCCC-----eEEEEECCCcc
Confidence 11112233444778888887643 68899988765
No 246
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=73.55 E-value=86 Score=32.19 Aligned_cols=218 Identities=13% Similarity=0.085 Sum_probs=109.5
Q ss_pred eEEEEE---CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCC-C-C-----cce--EEEEE----CCEEEEEc
Q 006334 31 HSACYS---HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPG-P-R-----DSH--SAILW----GHKMIVFG 94 (650)
Q Consensus 31 hs~v~~---~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~-p-R-----~~h--sa~~~----~~~lyVfG 94 (650)
+++++. .+.||+.+.... .-.-|++.+....+|+.+......+. . + ..+ ++++. .+.||+.+
T Consensus 58 ~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~ 135 (394)
T 3b7f_A 58 HHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGT 135 (394)
T ss_dssp EEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEE
T ss_pred EEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEe
Confidence 444443 467887654211 11257888777889998864211111 1 1 111 23332 46777654
Q ss_pred ccCCCcCcCeEEEEECCCCcEEeeecCCCCC--------------CCCcccEEEEEc--CCEEEEEccccCCCCcccceE
Q 006334 95 GTNGYKKVNDLHILDLESKEWMRPECRGAPP--------------SPRESHTATLVG--DDKMVIFGGSGEGEANYLNDL 158 (650)
Q Consensus 95 G~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P--------------~~R~~hs~~~~~--~~~Lyv~GG~~~~~~~~~~dv 158 (650)
- ...+++.+-...+|+.+......| .....+++.+.. .+.||+.... ..+
T Consensus 136 ~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~--------ggl 201 (394)
T 3b7f_A 136 S------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS--------GGV 201 (394)
T ss_dssp E------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET--------BEE
T ss_pred c------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC--------CCE
Confidence 2 235888877778999873211111 111223444332 3567764332 237
Q ss_pred EEEecCCCceeeccccC---CCCCC-----CCcceeeeec---CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCC
Q 006334 159 HVLDLKTMRWASPAVKG---DIPVP-----RDSHSSNVIA---NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSS 227 (650)
Q Consensus 159 ~~yd~~t~~Wt~i~~~~---~lP~~-----R~~hs~v~~~---~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~ 227 (650)
++.+-...+|+.+.... .+|.+ ...+.++... +.||+... ..+++++-...+|+.+.. .+
T Consensus 202 ~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~-------~gl~~s~D~G~tW~~~~~--~l 272 (394)
T 3b7f_A 202 FESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH-------CGIYRMDRREGVWKRIGD--AM 272 (394)
T ss_dssp EEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET-------TEEEEEETTTTEEECGGG--GS
T ss_pred EEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC-------CeEEEeCCCCCcceECCC--CC
Confidence 77766678998764211 12211 1223333332 56777432 458899888899999863 13
Q ss_pred CCc--ccceEEEEE---CCEEEEEeccCCC-------cccCeEEEEECCCCcEEEeec
Q 006334 228 PGV--RAGHAAINI---GTKVYIIGGVGDK-------HYYNDIWILNVSTCSWSQLDT 273 (650)
Q Consensus 228 P~~--R~~~s~v~~---~~~IyI~GG~~~~-------~~~~dv~~yD~~t~~W~~l~~ 273 (650)
|.. .+..+++.. .+.||+....... .....+|+-.-.-.+|+.+..
T Consensus 273 ~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~ 330 (394)
T 3b7f_A 273 PREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDR 330 (394)
T ss_dssp CTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECB
T ss_pred CCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCC
Confidence 321 233334442 3567776311110 011234443333468999863
No 247
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=73.34 E-value=30 Score=35.77 Aligned_cols=142 Identities=14% Similarity=0.148 Sum_probs=72.4
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCc---EEeeecCCCCCCCCcccEE-EEEcCC-EEEEEccccCCCCcccceEEEE
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKE---WMRPECRGAPPSPRESHTA-TLVGDD-KMVIFGGSGEGEANYLNDLHVL 161 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~---W~~l~~~~~~P~~R~~hs~-~~~~~~-~Lyv~GG~~~~~~~~~~dv~~y 161 (650)
++.+||.+-... ..++++|+.... |..- ......+.+... +...++ .|++..+ . ..+++|
T Consensus 147 ~GnaYVt~s~~~----~~I~rV~pdG~~~~~~~~~---~~~~~~~~G~nGIv~~pdg~~Liv~~~-~-------g~L~~f 211 (334)
T 2p9w_A 147 DGNSYVAFALGM----PAIARVSADGKTVSTFAWE---SGNGGQRPGYSGITFDPHSNKLIAFGG-P-------RALTAF 211 (334)
T ss_dssp TSCEEEEEEESS----CEEEEECTTSCCEEEEEEC---CCCSSSCCSCSEEEEETTTTEEEEESS-S-------SSEEEE
T ss_pred CCCEEEeCCCCC----CeEEEEeCCCCEEeeeeec---CCCcccccCcceEEEeCCCCEEEEEcC-C-------CeEEEE
Confidence 589999654321 569999998653 5431 222233444444 444355 4555543 2 358999
Q ss_pred ecCCCceeecccc--CCC-CCCCCcc-eeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCC---cccce
Q 006334 162 DLKTMRWASPAVK--GDI-PVPRDSH-SSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPG---VRAGH 234 (650)
Q Consensus 162 d~~t~~Wt~i~~~--~~l-P~~R~~h-s~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~---~R~~~ 234 (650)
|+.+-....+... +.. ...-... .....+++++++.-. .+.++++-...+ |......+..|. .+...
T Consensus 212 D~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~-----~~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~t 285 (334)
T 2p9w_A 212 DVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR-----APYAISFRSWDN-WKSANIKKTKRSELQNSGFT 285 (334)
T ss_dssp ECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE-----TTEEEEEECSST-TSEEEEEEEECGGGGSSCEE
T ss_pred cCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC-----CCCEEEEECCCC-cceeEEeeeecCccccCcee
Confidence 9874322122211 211 0000011 122357777555432 134455554455 888776554443 23333
Q ss_pred EEEE----ECCEEEEEecc
Q 006334 235 AAIN----IGTKVYIIGGV 249 (650)
Q Consensus 235 s~v~----~~~~IyI~GG~ 249 (650)
+.++ .+++||++-++
T Consensus 286 t~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 286 AVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EEEEEEETTEEEEEEEECC
T ss_pred EEEEeccccCCeEEEEeee
Confidence 3334 45799999765
No 248
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=73.16 E-value=22 Score=34.39 Aligned_cols=142 Identities=20% Similarity=0.347 Sum_probs=74.3
Q ss_pred ECCEEEEEccCCCCcccceEEEEECCCCcEEEeecC---CCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCC
Q 006334 36 SHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATT---GQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 36 ~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~---g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
.++.+|+|=| +.+|+++.....+...... ...|.. .. ++...++++|+|=| +.+|+|+..+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~~-ID-AA~~~~~~~yfFkG-------~~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPST-VD-AAFSWEDKLYLIQD-------TKVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCSS-CS-EEEEETTEEEEEET-------TEEEEEECSS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCCC-cc-EEEEECCcEEEecC-------CEEEEEeCCC
Confidence 4789999988 3577776543322211111 122322 22 33345899999977 5799998753
Q ss_pred C-cE-----EeeecCCCCCCC---CcccEEEEE-cCCEEEEEccccCCCCcccceEEEEecCCC---ceeeccccCCCCC
Q 006334 113 K-EW-----MRPECRGAPPSP---RESHTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKTM---RWASPAVKGDIPV 179 (650)
Q Consensus 113 ~-~W-----~~l~~~~~~P~~---R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~---~Wt~i~~~~~lP~ 179 (650)
+ +- +.+...-..|.. ..--++... .++++|+|-|. ..|+||..+. .|.... .+|
T Consensus 91 ~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~---------~ywr~d~~~~P~~i~~~~~---g~p- 157 (219)
T 1hxn_A 91 GYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR---------RLWWLDLKSGAQATWTELP---WPH- 157 (219)
T ss_dssp SCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT---------EEEEEEGGGGGGCCCEEEC---CSC-
T ss_pred CceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCC---------EEEEEeCCCCceEhhhcCC---CCC-
Confidence 2 11 112100012221 112233333 35899999874 4799997542 232111 122
Q ss_pred CCCcceeee------------ecCEEEEEeccCCCCccCeEEEEECC
Q 006334 180 PRDSHSSNV------------IANRLFVYGGDCGDQYHGDIDMLDMN 214 (650)
Q Consensus 180 ~R~~hs~v~------------~~~~Iyv~GG~~~~~~~n~v~~yd~~ 214 (650)
.... ++.. .++.+|+|-| +..|+||..
T Consensus 158 ~~vd-Aa~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~~ 196 (219)
T 1hxn_A 158 EKVD-GALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRHV 196 (219)
T ss_dssp SCCS-EEEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESSH
T ss_pred CCcC-EEEEccccccccceeccCCeEEEEEC-------CEEEEEeCC
Confidence 2222 2333 3467999988 567788764
No 249
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=72.94 E-value=32 Score=40.78 Aligned_cols=115 Identities=13% Similarity=0.092 Sum_probs=65.4
Q ss_pred CCEEEEEcccCCCcCcCeEE-EEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLH-ILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKT 165 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~-~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t 165 (650)
+++.+++++. ...+| .+|..+.....+. .............+++.++++... ..++++|+.+
T Consensus 347 dg~~l~~~s~-----~~~l~~~~d~~~~~~~~l~-----~~~~~~~~~~~SpDG~~la~~~~~-------~~v~~~d~~t 409 (1045)
T 1k32_A 347 TKVAFIHGTR-----EGDFLGIYDYRTGKAEKFE-----ENLGNVFAMGVDRNGKFAVVANDR-------FEIMTVDLET 409 (1045)
T ss_dssp SEEEEEEEET-----TEEEEEEEETTTCCEEECC-----CCCCSEEEEEECTTSSEEEEEETT-------SEEEEEETTT
T ss_pred CCCeEEEEEC-----CCceEEEEECCCCCceEec-----CCccceeeeEECCCCCEEEEECCC-------CeEEEEECCC
Confidence 6665555543 35789 9999888766652 111223344444567777776542 3799999988
Q ss_pred CceeeccccCCCCCCCCcceee-eecCEEEEEeccCC-----CCccCeEEEEECCCCcEEEee
Q 006334 166 MRWASPAVKGDIPVPRDSHSSN-VIANRLFVYGGDCG-----DQYHGDIDMLDMNSLTWSRLA 222 (650)
Q Consensus 166 ~~Wt~i~~~~~lP~~R~~hs~v-~~~~~Iyv~GG~~~-----~~~~n~v~~yd~~t~~W~~i~ 222 (650)
.+-..+... .... ...++ .-+++.+++++... ......++++|+.+.+...+.
T Consensus 410 g~~~~~~~~---~~~~-v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 410 GKPTVIERS---REAM-ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp CCEEEEEEC---SSSC-CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred CceEEeccC---CCCC-ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 776554311 1111 11222 22566566655432 123458999999988755543
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=72.71 E-value=73 Score=31.00 Aligned_cols=178 Identities=12% Similarity=0.173 Sum_probs=88.4
Q ss_pred EECCEEEEEccCCCCcccceEEEEECC-CCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCC
Q 006334 35 YSHGAVYIFGGCCGGLHFGDVLMLNLD-TMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLES 112 (650)
Q Consensus 35 ~~~~~IyvfGG~~~~~~~~dv~~yD~~-t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t 112 (650)
+.++.||+... ...+++||+. ...|...... .. ..+.+.. ++.||+.. . ...++.||+..
T Consensus 105 ~~~~~l~v~t~------~~~l~~~d~~g~~~~~~~~~~-----~~-~~~~~~~~~g~l~vgt-~-----~~~l~~~d~~g 166 (330)
T 3hxj_A 105 IFEDILYVTSM------DGHLYAINTDGTEKWRFKTKK-----AI-YATPIVSEDGTIYVGS-N-----DNYLYAINPDG 166 (330)
T ss_dssp EETTEEEEECT------TSEEEEECTTSCEEEEEECSS-----CC-CSCCEECTTSCEEEEC-T-----TSEEEEECTTS
T ss_pred EECCEEEEEec------CCEEEEEcCCCCEEEEEcCCC-----ce-eeeeEEcCCCEEEEEc-C-----CCEEEEECCCC
Confidence 34788887432 2468899987 3346543221 11 1222334 67777732 1 24689999882
Q ss_pred C-cEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecC-CCceeeccccCCCCCCCCcceeeee-
Q 006334 113 K-EWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLK-TMRWASPAVKGDIPVPRDSHSSNVI- 189 (650)
Q Consensus 113 ~-~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~-t~~Wt~i~~~~~lP~~R~~hs~v~~- 189 (650)
. .|... . +.. ...+.+...++.||+.. ..+++||.. ...|.... +.. ...+.+..
T Consensus 167 ~~~~~~~-~----~~~-~~~~~~~d~~g~l~v~t----------~~l~~~d~~g~~~~~~~~-----~~~-~~~~~~~~~ 224 (330)
T 3hxj_A 167 TEKWRFK-T----NDA-ITSAASIGKDGTIYFGS----------DKVYAINPDGTEKWNFYA-----GYW-TVTRPAISE 224 (330)
T ss_dssp CEEEEEE-C----SSC-CCSCCEECTTCCEEEES----------SSEEEECTTSCEEEEECC-----SSC-CCSCCEECT
T ss_pred CEeEEEe-c----CCC-ceeeeEEcCCCEEEEEe----------CEEEEECCCCcEEEEEcc-----CCc-ceeceEECC
Confidence 2 36542 1 111 12233333467777643 248888843 23566422 111 12223333
Q ss_pred cCEEEEEeccCCCCccCeEEEEECCCCc-EEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCCcccCeEEEEECCCC-
Q 006334 190 ANRLFVYGGDCGDQYHGDIDMLDMNSLT-WSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDKHYYNDIWILNVSTC- 266 (650)
Q Consensus 190 ~~~Iyv~GG~~~~~~~n~v~~yd~~t~~-W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~~~~~dv~~yD~~t~- 266 (650)
++.||+..- ...+++||..... |..-. . ..... +.+.. ++.||+... ...+++||....
T Consensus 225 ~g~l~v~t~------~~gl~~~~~~g~~~~~~~~-~----~~~~~-~~~~~~~g~l~v~t~------~ggl~~~d~~g~~ 286 (330)
T 3hxj_A 225 DGTIYVTSL------DGHLYAINPDGTEKWRFKT-G----KRIES-SPVIGNTDTIYFGSY------DGHLYAINPDGTE 286 (330)
T ss_dssp TSCEEEEET------TTEEEEECTTSCEEEEEEC-S----SCCCS-CCEECTTSCEEEECT------TCEEEEECTTSCE
T ss_pred CCeEEEEcC------CCeEEEECCCCCEeEEeeC-C----CCccc-cceEcCCCeEEEecC------CCCEEEECCCCcE
Confidence 347777532 1468888875544 44322 1 11111 22333 567777521 236889987433
Q ss_pred cEEE
Q 006334 267 SWSQ 270 (650)
Q Consensus 267 ~W~~ 270 (650)
.|..
T Consensus 287 ~~~~ 290 (330)
T 3hxj_A 287 KWNF 290 (330)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 3543
No 251
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=72.34 E-value=76 Score=31.05 Aligned_cols=200 Identities=13% Similarity=0.096 Sum_probs=95.8
Q ss_pred EEEECCEEEEEccCCCCcccceEEEEECCCC-cEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEEC
Q 006334 33 ACYSHGAVYIFGGCCGGLHFGDVLMLNLDTM-VWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDL 110 (650)
Q Consensus 33 ~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~-sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~ 110 (650)
.+..++.||+.+ .+.++.||+... .|+.-. +.....+++... ++++++..... ...++.+|+
T Consensus 43 ~~~pdG~ilvs~-------~~~V~~~d~~G~~~W~~~~-----~~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~ 106 (276)
T 3no2_A 43 AATKAGEILFSY-------SKGAKMITRDGRELWNIAA-----PAGCEMQTARILPDGNALVAWCGH----PSTILEVNM 106 (276)
T ss_dssp EECTTSCEEEEC-------BSEEEEECTTSCEEEEEEC-----CTTCEEEEEEECTTSCEEEEEEST----TEEEEEECT
T ss_pred EECCCCCEEEeC-------CCCEEEECCCCCEEEEEcC-----CCCccccccEECCCCCEEEEecCC----CCEEEEEeC
Confidence 334467887732 245899998322 365432 111223344433 66776654321 246788887
Q ss_pred CCCc-EEeeecCCCCCCC-CcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCC-CceeeccccCCCCCCCCcceee
Q 006334 111 ESKE-WMRPECRGAPPSP-RESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKT-MRWASPAVKGDIPVPRDSHSSN 187 (650)
Q Consensus 111 ~t~~-W~~l~~~~~~P~~-R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t-~~Wt~i~~~~~lP~~R~~hs~v 187 (650)
..+. |+. ........+ ...+.+....++.+++.... ...+.+||++- ..|+.-. +. .-+++.
T Consensus 107 ~Gk~l~~~-~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-------~~~v~~~d~~G~~~w~~~~--~~-----~~~~~~ 171 (276)
T 3no2_A 107 KGEVLSKT-EFETGIERPHAQFRQINKNKKGNYLVPLFA-------TSEVREIAPNGQLLNSVKL--SG-----TPFSSA 171 (276)
T ss_dssp TSCEEEEE-EECCSCSSGGGSCSCCEECTTSCEEEEETT-------TTEEEEECTTSCEEEEEEC--SS-----CCCEEE
T ss_pred CCCEEEEE-eccCCCCcccccccCceECCCCCEEEEecC-------CCEEEEECCCCCEEEEEEC--CC-----Ccccee
Confidence 5542 432 111111111 11122233445666655432 13588999862 2466421 11 112333
Q ss_pred ee-cCEEEEEeccCCCCccCeEEEEECCCCc--EEEeeecCCCCCccc-c-eEEEE-ECCEEEEEe--ccCCCc---ccC
Q 006334 188 VI-ANRLFVYGGDCGDQYHGDIDMLDMNSLT--WSRLAIIGSSPGVRA-G-HAAIN-IGTKVYIIG--GVGDKH---YYN 256 (650)
Q Consensus 188 ~~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~--W~~i~~~g~~P~~R~-~-~s~v~-~~~~IyI~G--G~~~~~---~~~ 256 (650)
.. ++.+++.+... ..+..||+.+.+ |+.-.. ..+..+. . .+++. .++.+||.. |..... ...
T Consensus 172 ~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~w~~~~~--~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~ 244 (276)
T 3no2_A 172 FLDNGDCLVACGDA-----HCFVQLNLESNRIVRRVNAN--DIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHP 244 (276)
T ss_dssp ECTTSCEEEECBTT-----SEEEEECTTTCCEEEEEEGG--GSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCC
T ss_pred EcCCCCEEEEeCCC-----CeEEEEeCcCCcEEEEecCC--CCCCccccccccceEcCCCCEEEEeccCccccccccCCc
Confidence 33 56777776532 469999998554 665421 1121122 2 22233 357888886 332100 123
Q ss_pred eEEEEECCCC-cEEE
Q 006334 257 DIWILNVSTC-SWSQ 270 (650)
Q Consensus 257 dv~~yD~~t~-~W~~ 270 (650)
.++.+|.+.+ .|+.
T Consensus 245 ~~~~~~~~g~~~W~~ 259 (276)
T 3no2_A 245 QLVEIDSEGKVVWQL 259 (276)
T ss_dssp SEEEECTTSBEEEEE
T ss_pred eEEEECCCCCEEEEe
Confidence 4666655433 3664
No 252
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=72.01 E-value=1e+02 Score=35.09 Aligned_cols=203 Identities=10% Similarity=0.033 Sum_probs=97.2
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCC-cEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTM-VWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~-sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
+++.+.|.-...+.....+|++|+.++ .. +.. ..+......+. -+++-++|.-.+.......+|+.++.+..
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~----~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~ 258 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD----KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQ 258 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC----CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCG
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc----cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCc
Confidence 455555543322222346999999887 52 110 00111112222 24433333333332333579999988753
Q ss_pred E--EeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC--ce--eeccccCCCCCCCCcceee-
Q 006334 115 W--MRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM--RW--ASPAVKGDIPVPRDSHSSN- 187 (650)
Q Consensus 115 W--~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~--~W--t~i~~~~~lP~~R~~hs~v- 187 (650)
- ..+- . .+...+........+++.+++..... ..+++|++|+.+. .+ ..+.. .. .-..++..
T Consensus 259 ~~~~lv~-~--~~~~~~~~~~~~SpDg~~l~~~~~~~----~~~~l~~~d~~~~~~~~~~~~l~~--~~--~~~~~s~~~ 327 (751)
T 2xe4_A 259 SEDVCLY-E--EHNPLFSAFMYKAADTNTLCIGSQSP----ETAEVHLLDLRKGNAHNTLEIVRP--RE--KGVRYDVQM 327 (751)
T ss_dssp GGCEEEE-E--CCCTTCEEEEEECTTSSEEEEEEECS----SCEEEEEEESSSCTTCCCEEESSC--CC--TTCCEEEEE
T ss_pred hhcEEEE-e--cCCCceEEEEEECCCCCEEEEEecCC----CCceEEEEECCCCCCCceeEEeec--CC--CCceEEEee
Confidence 1 1110 0 11223333334444554444333211 2468999999765 45 44331 10 00112222
Q ss_pred eecCEEEEEeccCCCCccCeEEEEECCC-CcEEE-eeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEEC
Q 006334 188 VIANRLFVYGGDCGDQYHGDIDMLDMNS-LTWSR-LAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNV 263 (650)
Q Consensus 188 ~~~~~Iyv~GG~~~~~~~n~v~~yd~~t-~~W~~-i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~ 263 (650)
..++.||+..-.+ ......++.+|+.+ ..|.. +-.. ............++.|++..-.+ ....++++|+
T Consensus 328 ~~g~~l~~~t~~~-~a~~~~L~~~d~~~~~~~~~~li~~---~~~~~l~~~~~~~~~lv~~~~~~---g~~~l~~~dl 398 (751)
T 2xe4_A 328 HGTSHLVILTNEG-GAVNHKLLIAPRGQPSDWSHVLVDH---SEDVFMESIAVRSNYLVVAGRRA---GLTRIWTMMA 398 (751)
T ss_dssp ETTTEEEEEECTT-TCTTCEEEEEETTSTTCCCCEEECC---CSSEEEEEEEECSSEEEEEEEET---TEEEEEEEEC
T ss_pred eeCCEEEEEeCCC-CCCCcEEEEEcCCCcccceeeEECC---CCCcEEEEEEEECCEEEEEEEeC---CEEEEEEEec
Confidence 2267788876543 12235899999876 67876 4311 11112223344567777765432 2457999997
No 253
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=71.10 E-value=99 Score=31.86 Aligned_cols=227 Identities=11% Similarity=0.112 Sum_probs=113.9
Q ss_pred cceEEEEECCCCcEEEeecCCC---CCCCCcceEEEE----ECCEEEEEccc------CCCc--CcCeEEEEECC---CC
Q 006334 52 FGDVLMLNLDTMVWSTLATTGQ---GPGPRDSHSAIL----WGHKMIVFGGT------NGYK--KVNDLHILDLE---SK 113 (650)
Q Consensus 52 ~~dv~~yD~~t~sW~~l~~~g~---~P~pR~~hsa~~----~~~~lyVfGG~------~~~~--~~ndv~~yD~~---t~ 113 (650)
...++++|+..+.-..+...+. -.......++.+ -+++|+|+--. .+.. -.+.+.+||+. ++
T Consensus 34 ~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg 113 (334)
T 2p9w_A 34 KGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENS 113 (334)
T ss_dssp TTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTC
T ss_pred CCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCC
Confidence 3578899998665545422110 011112244455 25789886211 0111 14679999988 44
Q ss_pred --cEEeeecCCCCC------C-C-CcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc---eeeccccCCCCCC
Q 006334 114 --EWMRPECRGAPP------S-P-RESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR---WASPAVKGDIPVP 180 (650)
Q Consensus 114 --~W~~l~~~~~~P------~-~-R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~---Wt~i~~~~~lP~~ 180 (650)
.|.- ....... . . ....-+++..++.+||.+-.. +..+++++++... |-.-. +....
T Consensus 114 ~~~~~~-dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~------~~~I~rV~pdG~~~~~~~~~~---~~~~~ 183 (334)
T 2p9w_A 114 KPVWSV-NFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG------MPAIARVSADGKTVSTFAWES---GNGGQ 183 (334)
T ss_dssp CCSEEE-ESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES------SCEEEEECTTSCCEEEEEECC---CCSSS
T ss_pred CEEEEe-cCccccccccccccccccCCceeEECCCCCEEEeCCCC------CCeEEEEeCCCCEEeeeeecC---CCccc
Confidence 4543 1110000 0 1 123345555578999976542 1469999987542 53211 22234
Q ss_pred CCcceeeee---cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeec--CCCCCccc-ce-EEEEECCEEEEEeccCCCc
Q 006334 181 RDSHSSNVI---ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAII--GSSPGVRA-GH-AAINIGTKVYIIGGVGDKH 253 (650)
Q Consensus 181 R~~hs~v~~---~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~--g~~P~~R~-~~-s~v~~~~~IyI~GG~~~~~ 253 (650)
+.+....++ ++.|++..+ . ..+++||+.+....+++.. +....... .. ...-.+++++++.-.
T Consensus 184 ~~G~nGIv~~pdg~~Liv~~~-~-----g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~---- 253 (334)
T 2p9w_A 184 RPGYSGITFDPHSNKLIAFGG-P-----RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR---- 253 (334)
T ss_dssp CCSCSEEEEETTTTEEEEESS-S-----SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE----
T ss_pred ccCcceEEEeCCCCEEEEEcC-C-----CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC----
Confidence 544444443 346666654 2 5799999885433123221 21101011 11 123367888555422
Q ss_pred ccCeEEEEECCCCcEEEeecCCCCCC---CcceeEEEE----ECCeEEEEcCCC
Q 006334 254 YYNDIWILNVSTCSWSQLDTCGQQPQ---GRFSHAAVV----TGSDIVIYGGCG 300 (650)
Q Consensus 254 ~~~dv~~yD~~t~~W~~l~~~~~~p~---~R~~hsav~----~~~~lyV~GG~~ 300 (650)
.+..+.+--..+ |......+..+. .+...++++ .+++||++-+..
T Consensus 254 -~~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 254 -APYAISFRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp -TTEEEEEECSST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCG
T ss_pred -CCCEEEEECCCC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeeec
Confidence 234555555555 887665443333 343444444 568899997654
No 254
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=71.06 E-value=1e+02 Score=32.06 Aligned_cols=154 Identities=10% Similarity=0.055 Sum_probs=80.8
Q ss_pred EEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCeEE
Q 006334 132 TATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGDID 209 (650)
Q Consensus 132 s~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~ 209 (650)
.+++..++.||+.... .+.+.+||++++.-..+... ... .+ ++.. ++.||+...... ..++
T Consensus 135 ~la~d~~g~lyv~d~~-------~~~I~~id~~~g~~~~~~~~--~~~---~~-ia~~~~g~~l~~~d~~~~----~~I~ 197 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRD-------DPRVRLISVDDNKVTTVHPG--FKG---GK-PAVTKDKQRVYSIGWEGT----HTVY 197 (409)
T ss_dssp EEEECSTTEEEEEETT-------TTEEEEEETTTTEEEEEEET--CCB---CB-CEECTTSSEEEEEBSSTT----CEEE
T ss_pred EEEEeCCCCEEEEecC-------CCcEEEEECCCCEEEEeecc--CCC---Cc-eeEecCCCcEEEEecCCC----ceEE
Confidence 3333457889987543 24689999988766554321 111 12 2222 345666543221 2789
Q ss_pred EEECCCCc-EEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcce-e-
Q 006334 210 MLDMNSLT-WSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFS-H- 284 (650)
Q Consensus 210 ~yd~~t~~-W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~-h- 284 (650)
+++..... ...+..... .....-+.+++. ++.||+.-. ...+++||+.+.....+...+........ .
T Consensus 198 ~~d~~~~~~~~~~g~~~~-~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 198 VYMKASGWAPTRIGQLGS-TFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp EEEGGGTTCEEEEEECCT-TSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred EEEcCCCceeEEeeeccc-hhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 99986543 233321111 011222333333 568888421 34799999998876665322111111222 1
Q ss_pred EEEEE--CCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 285 AAVVT--GSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 285 sav~~--~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
.+++. ++.||+..-. ...+++++.+
T Consensus 271 ~ia~~p~~g~lyv~d~~------~~~I~~~~~~ 297 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQN------LSSVYKITPD 297 (409)
T ss_dssp EEEEETTTTEEEEEETT------TTEEEEECTT
T ss_pred cEEEeCCCCEEEEEeCC------CCEEEEEecC
Confidence 45555 4788887432 2467777654
No 255
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=70.70 E-value=82 Score=30.74 Aligned_cols=25 Identities=16% Similarity=0.133 Sum_probs=17.3
Q ss_pred cCEEEEEeccCCCCccCeEEEEECCCCcEE
Q 006334 190 ANRLFVYGGDCGDQYHGDIDMLDMNSLTWS 219 (650)
Q Consensus 190 ~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~ 219 (650)
++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 284 ~~~~l~s~~~d-----g~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 284 VHGTLATVGSD-----GRFSFWDKDARTKL 308 (368)
T ss_dssp TTCCEEEEETT-----SCEEEEETTTTEEE
T ss_pred CCCEEEEEccC-----CeEEEEECCCCcEE
Confidence 45677777755 46899998876543
No 256
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=70.23 E-value=66 Score=33.35 Aligned_cols=19 Identities=16% Similarity=0.379 Sum_probs=15.6
Q ss_pred CcccEEEEEcCCEEEEEcc
Q 006334 128 RESHTATLVGDDKMVIFGG 146 (650)
Q Consensus 128 R~~hs~~~~~~~~Lyv~GG 146 (650)
-..|++++..++.+|.+|-
T Consensus 167 G~~hs~alt~~G~v~~wG~ 185 (389)
T 3kci_A 167 GGAHSACVTAAGDLYTWGK 185 (389)
T ss_dssp CSSEEEEEETTSCEEEEEC
T ss_pred CcCeEEEEeCCCeEEEeCC
Confidence 3578888888899999984
No 257
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=69.99 E-value=97 Score=31.64 Aligned_cols=153 Identities=13% Similarity=0.174 Sum_probs=76.8
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
+.+++.|+.+ ..+.+||+.+.+-...-.. .+....-.++++. ++++++.|+.++ .+.+||+.+.+..
T Consensus 182 ~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~ 249 (437)
T 3gre_A 182 KSLLVALTNL-----SRVIIFDIRTLERLQIIEN--SPRHGAVSSICIDEECCVLILGTTRG-----IIDIWDIRFNVLI 249 (437)
T ss_dssp CEEEEEEETT-----SEEEEEETTTCCEEEEEEC--CGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEETTTTEEE
T ss_pred CCEEEEEeCC-----CeEEEEeCCCCeeeEEEcc--CCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEcCCccEE
Confidence 6677777653 3688999987764332221 0011112223332 567777787653 5888999886554
Q ss_pred eeecCCCCCCCCcccEEEEE----cCCEEEEEccccCCCCcccceEEEEecCCCceeeccccC--CC------C------
Q 006334 117 RPECRGAPPSPRESHTATLV----GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKG--DI------P------ 178 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~----~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~--~l------P------ 178 (650)
..- .......-.++... .++.+++.|+.+ ..+.+||+.+.+-...-... .. |
T Consensus 250 ~~~---~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (437)
T 3gre_A 250 RSW---SFGDHAPITHVEVCQFYGKNSVIVVGGSSK-------TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLE 319 (437)
T ss_dssp EEE---BCTTCEEEEEEEECTTTCTTEEEEEEESTT-------EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGG
T ss_pred EEE---ecCCCCceEEEEeccccCCCccEEEEEcCC-------CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccc
Confidence 320 00111111111111 134466666542 35778888765422110000 00 0
Q ss_pred --------CCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCc
Q 006334 179 --------VPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLT 217 (650)
Q Consensus 179 --------~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~ 217 (650)
....-.+++..++.+++.||.+ ..+..||+.+.+
T Consensus 320 ~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~~wd~~~~~ 361 (437)
T 3gre_A 320 ELNFCGIRSLNALSTISVSNDKILLTDEAT-----SSIVMFSLNELS 361 (437)
T ss_dssp GCCCCCCCSGGGGCCEEEETTEEEEEEGGG-----TEEEEEETTCGG
T ss_pred cceecccccCCceEEEEECCceEEEecCCC-----CeEEEEECCCcc
Confidence 0011122333467788888865 478999988765
No 258
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=69.89 E-value=1e+02 Score=31.64 Aligned_cols=119 Identities=10% Similarity=-0.025 Sum_probs=57.0
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCC----CcCcCeEEEEECCC
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNG----YKKVNDLHILDLES 112 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~----~~~~ndv~~yD~~t 112 (650)
..+|+.-+...... ..+++||+.+.+-.. .. |.....+.+..- +..+|+.--... ....+.+.+||+.+
T Consensus 33 ~~~yv~~~~~~~~~-~~v~v~D~~t~~~~~--~i---~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 33 RRSYINLPAHHSAI-IQQWVLDAGSGSILG--HV---NGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CEEEEeCCcccCCc-cEEEEEECCCCeEEE--Ee---cCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 56777654111111 178999998876432 22 222222333333 457888642211 12347788999987
Q ss_pred CcEE-eeecCCCC--CCCCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecCCCcee
Q 006334 113 KEWM-RPECRGAP--PSPRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLKTMRWA 169 (650)
Q Consensus 113 ~~W~-~l~~~~~~--P~~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt 169 (650)
.+-. .+.+.+.. .....-..+++..++ .||+.. .. ..+.+.++| ++++-.
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n-~~-----~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQ-FA-----AGPAVGLVV-QGGSSD 160 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEe-cC-----CCCeEEEEE-CCCCEE
Confidence 6432 22211000 000111233444444 455542 21 124688899 877543
No 259
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=69.76 E-value=1e+02 Score=35.22 Aligned_cols=199 Identities=12% Similarity=0.036 Sum_probs=100.2
Q ss_pred cccceEEEEECCCCcEEEeecCCCCCCC--------CcceEEEEECCEEEEEc-----ccCCCcCcCeEEEEECCCCc--
Q 006334 50 LHFGDVLMLNLDTMVWSTLATTGQGPGP--------RDSHSAILWGHKMIVFG-----GTNGYKKVNDLHILDLESKE-- 114 (650)
Q Consensus 50 ~~~~dv~~yD~~t~sW~~l~~~g~~P~p--------R~~hsa~~~~~~lyVfG-----G~~~~~~~ndv~~yD~~t~~-- 114 (650)
.....+.+||..++++-. ..-. |.. ++...+-.-++.+|+.- ..+...+...+++....|..
T Consensus 153 ~d~~~~~~~d~~t~~~~~--~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~ 229 (711)
T 4hvt_A 153 KDEMFFREWDLEKKDFVK--NGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEK 229 (711)
T ss_dssp CSEEEEEEEETTTTEECT--TCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGG
T ss_pred CceeEEEEEECCcCCcCC--CCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHH
Confidence 344567889999887642 1111 222 11222333457777742 12233344567776665542
Q ss_pred EEeeecCCCCCCCCcccEEEEEcCCE-----EEEEccccCCCCcccceEEEEecCC--CceeeccccCCCCCCCCcceee
Q 006334 115 WMRPECRGAPPSPRESHTATLVGDDK-----MVIFGGSGEGEANYLNDLHVLDLKT--MRWASPAVKGDIPVPRDSHSSN 187 (650)
Q Consensus 115 W~~l~~~~~~P~~R~~hs~~~~~~~~-----Lyv~GG~~~~~~~~~~dv~~yd~~t--~~Wt~i~~~~~lP~~R~~hs~v 187 (650)
=..+- ..... ....+..+..+++ ++|.-+. ..+.+++|..|... ..|..+. + ++...-..
T Consensus 230 ~~~v~--~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~l~----~--~~~~~~~~ 296 (711)
T 4hvt_A 230 AKKLF--EVPKE-YIYVSAGKLLSDTISSSLIFISANK----DFYNYDNYILDTKYKNLKLQKIN----M--PSDATLQG 296 (711)
T ss_dssp CEEEE--ECCTT-SCEEEEEESSCTTTCSSEEEEEEES----SSSCEEEEEEECSSSSCEEEECC----S--CTTCEEEE
T ss_pred CeEEe--ccCCC-ceEEEEEEecCCCceEEEEEEEEec----ccCceeEEEEcCCCCCCcceEee----c--CCcceEee
Confidence 11110 01111 2222222222222 4443332 12347788888653 5677653 2 33222234
Q ss_pred eecCEEEEEeccCC-----CCccCeEEEEECCC--------CcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcc
Q 006334 188 VIANRLFVYGGDCG-----DQYHGDIDMLDMNS--------LTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHY 254 (650)
Q Consensus 188 ~~~~~Iyv~GG~~~-----~~~~n~v~~yd~~t--------~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~ 254 (650)
..++++|+....+- .-....+..+|+.+ ..|+.+- .+-..+.--.+...++.|++..-. ..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~l~~~~~~---~~ 370 (711)
T 4hvt_A 297 SFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF---TPTANEVFNFISTTKDRVFLATYD---NV 370 (711)
T ss_dssp EETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE---CCCTTEEEEEEEECSSCEEEEEEE---TT
T ss_pred eECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE---CCCCCCeEEEEEEECCEEEEEEEE---CC
Confidence 56889999764321 12456788898765 4688743 111223333445556777666322 22
Q ss_pred cCeEEEEECCCCcEEE
Q 006334 255 YNDIWILNVSTCSWSQ 270 (650)
Q Consensus 255 ~~dv~~yD~~t~~W~~ 270 (650)
...++++|+.++.|..
T Consensus 371 ~~~l~~~~~~~g~~~~ 386 (711)
T 4hvt_A 371 VAKVVTFTLENEQWTK 386 (711)
T ss_dssp EEEEEEECEETTEECC
T ss_pred EEEEEEEECCCCceEE
Confidence 3568999988888843
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=69.56 E-value=67 Score=36.63 Aligned_cols=195 Identities=13% Similarity=0.051 Sum_probs=94.1
Q ss_pred ceEEEEECCCCcE--EEeecCCCCCCCCcceEEEE-ECCE-EEEEcccCCCcCcCeEEEEECCCC--cE--EeeecCCCC
Q 006334 53 GDVLMLNLDTMVW--STLATTGQGPGPRDSHSAIL-WGHK-MIVFGGTNGYKKVNDLHILDLESK--EW--MRPECRGAP 124 (650)
Q Consensus 53 ~dv~~yD~~t~sW--~~l~~~g~~P~pR~~hsa~~-~~~~-lyVfGG~~~~~~~ndv~~yD~~t~--~W--~~l~~~~~~ 124 (650)
..+|++++.+..- ..+-.. +...+...... -+++ |++... . ...+++|.+|+.+. .+ +.+. ...
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~---~~~~~~~~~~~SpDg~~l~~~~~-~--~~~~~l~~~d~~~~~~~~~~~~l~--~~~ 318 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEE---HNPLFSAFMYKAADTNTLCIGSQ-S--PETAEVHLLDLRKGNAHNTLEIVR--PRE 318 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEEC---CCTTCEEEEEECTTSSEEEEEEE-C--SSCEEEEEEESSSCTTCCCEEESS--CCC
T ss_pred CEEEEEECCCCchhcEEEEec---CCCceEEEEEECCCCCEEEEEec-C--CCCceEEEEECCCCCCCceeEEee--cCC
Confidence 4688888776431 111111 11223333222 2454 444432 2 23578999999875 46 5541 111
Q ss_pred CCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCC-Cceee-ccccCCCCCCCCcceeeeecCEEEEEeccCCC
Q 006334 125 PSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKT-MRWAS-PAVKGDIPVPRDSHSSNVIANRLFVYGGDCGD 202 (650)
Q Consensus 125 P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t-~~Wt~-i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~ 202 (650)
..+. .+.....++.||+..-.+ ......++.+|+.+ ..|.. +.. . ............++.||+..-.++
T Consensus 319 ~~~~--~s~~~~~g~~l~~~t~~~---~a~~~~L~~~d~~~~~~~~~~li~--~-~~~~~l~~~~~~~~~lv~~~~~~g- 389 (751)
T 2xe4_A 319 KGVR--YDVQMHGTSHLVILTNEG---GAVNHKLLIAPRGQPSDWSHVLVD--H-SEDVFMESIAVRSNYLVVAGRRAG- 389 (751)
T ss_dssp TTCC--EEEEEETTTEEEEEECTT---TCTTCEEEEEETTSTTCCCCEEEC--C-CSSEEEEEEEECSSEEEEEEEETT-
T ss_pred CCce--EEEeeeeCCEEEEEeCCC---CCCCcEEEEEcCCCcccceeeEEC--C-CCCcEEEEEEEECCEEEEEEEeCC-
Confidence 1111 112112357888876542 11234788999876 67875 321 1 011111122334567776654332
Q ss_pred CccCeEEEEEC-------CCCc-EEEeeecCCCCCcccceEEE-----EEC-CEEE-EEeccCCCcccCeEEEEECCCCc
Q 006334 203 QYHGDIDMLDM-------NSLT-WSRLAIIGSSPGVRAGHAAI-----NIG-TKVY-IIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 203 ~~~n~v~~yd~-------~t~~-W~~i~~~g~~P~~R~~~s~v-----~~~-~~Iy-I~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
...++++|+ .+.. ...+. .|......... ..+ +.++ .+.. ......+|.||+.+++
T Consensus 390 --~~~l~~~dl~~~~~~~~~g~~~~~l~----l~~~~~~~~~~~~~~~~~~~~~l~~~~ss---~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 390 --LTRIWTMMADSQDGVFKAGTGLREVV----MEEPIFTVHLVESQMLEYEEPTFRMEYSS---LATPNTWFDVSPQDHS 460 (751)
T ss_dssp --EEEEEEEECCTTTSCCCTTTCCEECC----CCCSSCEEEECGGGCCCTTCSCEEEEEEE---TTEEEEEEEECTTTCC
T ss_pred --EEEEEEEecccccccccCCccceEEC----CCCceeEEEeccCcccCCCCCEEEEEEeC---CCCCCEEEEEECCCCc
Confidence 457888986 3443 44443 22221111110 112 2333 3322 2334579999999888
Q ss_pred EEEeec
Q 006334 268 WSQLDT 273 (650)
Q Consensus 268 W~~l~~ 273 (650)
.+.+..
T Consensus 461 ~~~l~~ 466 (751)
T 2xe4_A 461 RTAVKV 466 (751)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 887764
No 261
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=69.48 E-value=1.2e+02 Score=32.22 Aligned_cols=199 Identities=14% Similarity=0.218 Sum_probs=109.1
Q ss_pred CCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCC------CcEEeeecCCCCCCCCcccEE
Q 006334 60 LDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLES------KEWMRPECRGAPPSPRESHTA 133 (650)
Q Consensus 60 ~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t------~~W~~l~~~~~~P~~R~~hs~ 133 (650)
+..+.|+.... +..|..-.-|+.+.+++.-|.+|=.+++..-.++=.+-... ..-++. + ...-.+-+.-.+
T Consensus 267 F~~spW~~t~L-~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~-i-~sey~~~AsEPC 343 (670)
T 3ju4_A 267 FHKSPWRKTDL-GLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQ-I-PSEYEPDASEPC 343 (670)
T ss_dssp STTSCCEEEEC-CSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEE-C-CGGGCTTEEEEE
T ss_pred eccCCceeccc-ccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeee-c-hhhhccccccch
Confidence 44566766533 34466678899999998888888777765544443322111 111221 1 111233334445
Q ss_pred EEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCC----------CC
Q 006334 134 TLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCG----------DQ 203 (650)
Q Consensus 134 ~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~----------~~ 203 (650)
+-++++.||++---. .....=+.+.+-+..-..|+.+...... -....-.+.+++.||+||-... +.
T Consensus 344 vkyYdgvLyLtTRgt-~~~~~GS~L~rs~d~Gq~w~slrfp~nv--HhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~R 420 (670)
T 3ju4_A 344 IKYYDGVLYLITRGT-RGDRLGSSLHRSRDIGQTWESLRFPHNV--HHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDR 420 (670)
T ss_dssp EEEETTEEEEEEEES-CTTSCCCEEEEESSTTSSCEEEECTTCC--CSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCC
T ss_pred hhhhCCEEEEEecCc-CCCCCcceeeeecccCCchhheeccccc--cccCCCcceeCCEEEEEeccccccccccCCCccc
Confidence 556689999885331 1233445677777777889987632211 1223334567899999987321 11
Q ss_pred c---cCeEE--EEE-----CCCCcEEEeee---cCCCCCcccceEEEEE-CCE-EEEEeccCC-----------------
Q 006334 204 Y---HGDID--MLD-----MNSLTWSRLAI---IGSSPGVRAGHAAINI-GTK-VYIIGGVGD----------------- 251 (650)
Q Consensus 204 ~---~n~v~--~yd-----~~t~~W~~i~~---~g~~P~~R~~~s~v~~-~~~-IyI~GG~~~----------------- 251 (650)
+ ....+ +.+ .++-+|..|.. .|..-..-.+...+++ ++- .|||||.+-
T Consensus 421 Y~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~np~s~gdN~~k~~~~~ 500 (670)
T 3ju4_A 421 YKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHFNPWTYGDNSAKDPFKS 500 (670)
T ss_dssp SSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSCCCCTTTTTTTCCTTST
T ss_pred ccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccCCccccccccccCcccc
Confidence 1 11222 233 34557888775 2333233334444444 554 589999741
Q ss_pred CcccCeEEEEECC
Q 006334 252 KHYYNDIWILNVS 264 (650)
Q Consensus 252 ~~~~~dv~~yD~~ 264 (650)
.....|+|+|.++
T Consensus 501 ~Ghp~dlY~~ri~ 513 (670)
T 3ju4_A 501 DGHPSDLYCYKMK 513 (670)
T ss_dssp TCCCCEEEEEEEE
T ss_pred CCCCcceEEEEEE
Confidence 1234579988764
No 262
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=69.27 E-value=92 Score=32.16 Aligned_cols=147 Identities=10% Similarity=0.074 Sum_probs=69.5
Q ss_pred CEEEEEcccCCCcCcCeEEEEECCCC--------cEEeeecCCCCCCCCcccEEEEEcCCE-EEEEccccCCCCcccceE
Q 006334 88 HKMIVFGGTNGYKKVNDLHILDLESK--------EWMRPECRGAPPSPRESHTATLVGDDK-MVIFGGSGEGEANYLNDL 158 (650)
Q Consensus 88 ~~lyVfGG~~~~~~~ndv~~yD~~t~--------~W~~l~~~~~~P~~R~~hs~~~~~~~~-Lyv~GG~~~~~~~~~~dv 158 (650)
+.+++.|+.++ .+.+||..+. ....+..... ......++....++. +++.|+.+ ..+
T Consensus 141 ~~~lat~~~dg-----~V~vwd~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~~~d-------g~i 206 (430)
T 2xyi_A 141 ACVIATKTPSS-----DVLVFDYTKHPSKPEPSGECQPDLRLRG--HQKEGYGLSWNPNLNGYLLSASDD-------HTI 206 (430)
T ss_dssp EEEEEEECSSS-----CEEEEEGGGSCSSCCTTCCCCCSEEEEC--CSSCCCCEEECTTSTTEEEEECTT-------SCE
T ss_pred CcEEEEECCCC-----cEEEEECCCcccccCccccCCCcEEecC--CCCCeEEEEeCCCCCCeEEEEeCC-------CeE
Confidence 45677666543 5788887651 1211100000 111123334333444 77777763 347
Q ss_pred EEEecCCC---ceeeccccCCC-CCCCCcceeeee--cCEEEEEeccCCCCccCeEEEEECCCCc----EEEeeecCCCC
Q 006334 159 HVLDLKTM---RWASPAVKGDI-PVPRDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLT----WSRLAIIGSSP 228 (650)
Q Consensus 159 ~~yd~~t~---~Wt~i~~~~~l-P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~----W~~i~~~g~~P 228 (650)
.+||+.+. .+.... ...+ .....-+++... ++.+++.|+.+ ..+.+||+.+.. -..+. ..
T Consensus 207 ~vwd~~~~~~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~~~~~~~~~~---~~- 276 (430)
T 2xyi_A 207 CLWDINATPKEHRVIDA-KNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNNTSKPSHTVD---AH- 276 (430)
T ss_dssp EEEETTSCCBGGGEEEC-SEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSCSSSCSEEEE---CC-
T ss_pred EEEeCCCCCCCCceecc-ceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCCCCcceeEee---cC-
Confidence 88888762 222100 0001 111111222222 45677777654 478999987652 11121 00
Q ss_pred CcccceEEEEEC--C-EEEEEeccCCCcccCeEEEEECCC
Q 006334 229 GVRAGHAAINIG--T-KVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 229 ~~R~~~s~v~~~--~-~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
.....++.+. + .+++.|+.+ ..+.+||+.+
T Consensus 277 --~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vwd~~~ 309 (430)
T 2xyi_A 277 --TAEVNCLSFNPYSEFILATGSAD-----KTVALWDLRN 309 (430)
T ss_dssp --SSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTC
T ss_pred --CCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEeCCC
Confidence 1112223332 3 478887754 3588999876
No 263
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=68.86 E-value=95 Score=30.74 Aligned_cols=208 Identities=14% Similarity=0.083 Sum_probs=101.4
Q ss_pred eeEEEEECCEEEEEccCCCCcccceEEEEECC--CCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcC-c-CeE
Q 006334 30 GHSACYSHGAVYIFGGCCGGLHFGDVLMLNLD--TMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKK-V-NDL 105 (650)
Q Consensus 30 ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~--t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~-~-ndv 105 (650)
.|++++.++.||.+|-....+. . + +. ......+.. -..|++++.+++||.+|-...... . ..+
T Consensus 34 ~h~~~l~~G~v~~wG~n~~Gql-g-~----p~~~~~~i~~ia~-------G~~hs~~l~~G~v~~wG~n~~Gqlg~P~~~ 100 (282)
T 3qhy_B 34 FHGLALKGGKVLGWGANLNGQL-T-M----PAATQSGVDAIAA-------GNYHSLALKDGEVIAWGGNEDGQTTVPAEA 100 (282)
T ss_dssp SEEEEEETTEEEEEECCSSSTT-S-C----CGGGGSCCCEEEE-------CSSEEEEEETTEEEEEECCTTSTTCCCGGG
T ss_pred CeEEEEECCEEEEEeCCCCCCC-C-C----CccCCCCEEEEEe-------CCCEEEEEECCEEEEeeCCCCCCCCCCccc
Confidence 5777767899999995332211 1 0 00 011122211 234666667999999985432111 0 000
Q ss_pred EEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcce
Q 006334 106 HILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHS 185 (650)
Q Consensus 106 ~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs 185 (650)
......+ .+-..|++++. ++++|.+|-..... +. + -.........+. .-..|+
T Consensus 101 ------~~~v~~i-------a~G~~hs~al~-~G~v~~wG~n~~gq---lg-~--~~~~~~~i~~i~-------~G~~~~ 153 (282)
T 3qhy_B 101 ------RSGVDAI-------AAGAWASYALK-DGKVIAWGDDSDGQ---TT-V--PAEAQSGVTALD-------GGVYTA 153 (282)
T ss_dssp ------SSSEEEE-------EEETTEEEEEE-TTEEEEEECCTTST---TS-C--CGGGGSSEEEEE-------ECSSEE
T ss_pred ------CCCeEEE-------ECcCCEEEEEe-CCeEEEecCCCCCc---CC-C--CccCCCCeEEEE-------cccCEE
Confidence 1133333 22346888888 99999998643211 11 0 000111222222 234566
Q ss_pred eeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCC
Q 006334 186 SNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 186 ~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
++.-++.+|.+|-......... .........+.. -..|+++.-++++|.+|-......-... ...
T Consensus 154 ~~l~~G~v~~wG~n~~gqlg~p----~~~~~~v~~i~~-------G~~hs~al~~G~v~~wG~n~~gqlg~p~----~~~ 218 (282)
T 3qhy_B 154 LAVKNGGVIAWGDNYFGQTTVP----AEAQSGVDDVAG-------GIFHSLALKDGKVIAWGDNRYKQTTVPT----EAL 218 (282)
T ss_dssp EEEETTEEEEEECCTTSTTSCC----GGGGSSEEEEEE-------CSSEEEEEETTEEEEEECCTTSTTCCCG----GGG
T ss_pred EEEECCEEEEecCCCCCCCCCc----eecCCCeEEEEe-------cCCEEEEEECCeEEEEECCCCCCCCCCc----ccC
Confidence 6666899999997543322100 000123444441 2346666667899999854332210000 000
Q ss_pred CcEEEeecCCCCCCCcceeEEEEECCeEEEEcCC
Q 006334 266 CSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGC 299 (650)
Q Consensus 266 ~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~ 299 (650)
.....+. .-..|++++.++++|.+|-.
T Consensus 219 ~~v~~i~-------~G~~h~~al~~g~v~~wG~n 245 (282)
T 3qhy_B 219 SGVSAIA-------SGEWYSLALKNGKVIAWGSS 245 (282)
T ss_dssp SSCCEEE-------ECSSCEEEEETTEEEEESTT
T ss_pred CCceEEE-------cCCCEEEEEECCEEEEecCC
Confidence 1122221 12356666668899999753
No 264
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=68.69 E-value=1e+02 Score=31.13 Aligned_cols=101 Identities=16% Similarity=0.192 Sum_probs=50.6
Q ss_pred cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCC--CC--cccceEEEEECCEEEEEeccCCCcccCeEEEEECCC
Q 006334 190 ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSS--PG--VRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 190 ~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~--P~--~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
++..++.|+.+ ..+..||+.+..-...-..... .. +.....+...++++++.|+.+ ..+++||+.+
T Consensus 260 ~~~~l~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----g~i~vwd~~~ 329 (380)
T 3iz6_a 260 DGQRFGTGSDD-----GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-----GDCYVWDTLL 329 (380)
T ss_dssp TSSEEEEECSS-----SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----SCEEEEETTT
T ss_pred CCCeEEEEcCC-----CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----CCEEEEECCC
Confidence 46677777765 3688999887754333211000 00 011122222356777776543 3689999887
Q ss_pred CcEEE-eecCCCCCCCcceeEEEEECCeEEEEcCCC
Q 006334 266 CSWSQ-LDTCGQQPQGRFSHAAVVTGSDIVIYGGCG 300 (650)
Q Consensus 266 ~~W~~-l~~~~~~p~~R~~hsav~~~~~lyV~GG~~ 300 (650)
..... +......-..+....+..-++.+++.|+.+
T Consensus 330 ~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 330 AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence 66443 211100111122222222266788888753
No 265
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=67.57 E-value=1.3e+02 Score=31.89 Aligned_cols=147 Identities=5% Similarity=0.002 Sum_probs=72.1
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
+++.++.|+.++ .+..||........+... ...-.++....++++++.|+.+ ..+.+||....
T Consensus 355 ~g~~l~~~~~dg-----~v~~~~~~~~~~~~~~~~-----~~~v~~~~~s~dg~~l~~~~~d-------~~v~~~~~~~~ 417 (577)
T 2ymu_A 355 DGQTIASASDDK-----TVKLWNRNGQLLQTLTGH-----SSSVRGVAFSPDGQTIASASDD-------KTVKLWNRNGQ 417 (577)
T ss_dssp TSSEEEEEETTS-----EEEEEETTCCEEEEEECC-----SSCEEEEEECTTSSCEEEEETT-------SEEEEECTTCC
T ss_pred CCCEEEEEeCCC-----EEEEEcCCCCEEEEecCC-----CCCeEEEEECCCCCEEEEEeCC-------CEEEEEeCCCC
Confidence 566777776533 466777654433333111 1111233334467777777753 24677775433
Q ss_pred ceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEE
Q 006334 167 RWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKV 243 (650)
Q Consensus 167 ~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~I 243 (650)
.-..+. .. ...-..+.+ ++++++.++.+ ..+..||.....-..+... . ..-.+++. .++++
T Consensus 418 ~~~~~~---~~---~~~v~~~~~s~d~~~l~~~~~d-----~~v~~w~~~~~~~~~~~~~----~-~~v~~~~~spd~~~ 481 (577)
T 2ymu_A 418 LLQTLT---GH---SSSVWGVAFSPDDQTIASASDD-----KTVKLWNRNGQLLQTLTGH----S-SSVRGVAFSPDGQT 481 (577)
T ss_dssp EEEEEE---CC---SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSCEEEEEECC----S-SCEEEEEECTTSCE
T ss_pred EEEEec---CC---CCCeEEEEECCCCCEEEEEcCC-----CEEEEEECCCCEEEEEcCC----C-CCEEEEEEcCCCCE
Confidence 222221 11 111111222 46677776654 3678888766555544411 1 11122222 35677
Q ss_pred EEEeccCCCcccCeEEEEECCCCcEEEe
Q 006334 244 YIIGGVGDKHYYNDIWILNVSTCSWSQL 271 (650)
Q Consensus 244 yI~GG~~~~~~~~dv~~yD~~t~~W~~l 271 (650)
++.|+.+ ..+.+||.....-..+
T Consensus 482 las~~~d-----~~i~iw~~~~~~~~~~ 504 (577)
T 2ymu_A 482 IASASDD-----KTVKLWNRNGQLLQTL 504 (577)
T ss_dssp EEEEETT-----SEEEEEETTSCEEEEE
T ss_pred EEEEeCC-----CEEEEEcCCCCEEEEE
Confidence 7776643 3577888655433333
No 266
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=67.57 E-value=1.1e+02 Score=36.72 Aligned_cols=187 Identities=17% Similarity=0.179 Sum_probs=100.9
Q ss_pred ceeEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecC--CCCCCCCcceEEEEE---CCEEEEEcccCCCcCcC
Q 006334 29 WGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATT--GQGPGPRDSHSAILW---GHKMIVFGGTNGYKKVN 103 (650)
Q Consensus 29 ~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~--g~~P~pR~~hsa~~~---~~~lyVfGG~~~~~~~n 103 (650)
.|+++....+.+ ++|.-........++.|+.....|...... ........++++++. +...||+|- ......-
T Consensus 335 ~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GA-P~~~~~G 412 (1095)
T 3k6s_A 335 EGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGA-PRYQHTG 412 (1095)
T ss_dssp TTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEE-TTGGGTC
T ss_pred ccccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEc-ccccccc
Confidence 466777666666 777654333445688887765554332211 111223345666542 234456553 2233456
Q ss_pred eEEEEECCCCcEEeee-cCCCCCCCCcccEEEEEc-----CCEEEEEccccCCCCcccceEEEEecCC--Cceeecccc-
Q 006334 104 DLHILDLESKEWMRPE-CRGAPPSPRESHTATLVG-----DDKMVIFGGSGEGEANYLNDLHVLDLKT--MRWASPAVK- 174 (650)
Q Consensus 104 dv~~yD~~t~~W~~l~-~~~~~P~~R~~hs~~~~~-----~~~Lyv~GG~~~~~~~~~~dv~~yd~~t--~~Wt~i~~~- 174 (650)
.+++|......|.... ..+......++.+.++.. ...|+++|.-..........+++|.... ..|......
T Consensus 413 ~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~l~ 492 (1095)
T 3k6s_A 413 KAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLY 492 (1095)
T ss_dssp EEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSSCC
T ss_pred eEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEEee
Confidence 7899988877887642 344445556677777541 2467777743221122345688886543 458743221
Q ss_pred CC--CCCCCCcceeeeecC-------EEEEEeccCCCCccCeEEEEECCCC-cE
Q 006334 175 GD--IPVPRDSHSSNVIAN-------RLFVYGGDCGDQYHGDIDMLDMNSL-TW 218 (650)
Q Consensus 175 ~~--lP~~R~~hs~v~~~~-------~Iyv~GG~~~~~~~n~v~~yd~~t~-~W 218 (650)
+. .+..|++.+++.+++ .|+ +|.-........+|+|.-... .|
T Consensus 493 g~~~~~~~~FG~sva~~gD~NgDG~~Dl~-VGAP~~~~~~G~vyi~~g~~~~g~ 545 (1095)
T 3k6s_A 493 GEQGHPWGRFGAALTVLGDVNGDKLTDVV-IGAPGEEENRGAVYLFHGVLGPSI 545 (1095)
T ss_dssp CCCSCSSCCBTSCEEEEECSSSSSCCEEE-EECTTTTTSCCBEEEEEBCSSSCB
T ss_pred cccCCccccCccceEeecccCCCCCcCEE-EeCCcCCCCCCEEEEecCCCCCCc
Confidence 11 135677777776522 354 443222234567888886654 44
No 267
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=66.94 E-value=40 Score=38.02 Aligned_cols=154 Identities=14% Similarity=0.181 Sum_probs=77.5
Q ss_pred EEEEECCEEEEEccCCCCcccceEEEEECCCC-cEEEeecCC---CCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEE
Q 006334 32 SACYSHGAVYIFGGCCGGLHFGDVLMLNLDTM-VWSTLATTG---QGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLH 106 (650)
Q Consensus 32 s~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~-sW~~l~~~g---~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~ 106 (650)
+++.+++.+|+|=| +.+|+++.... ......... ..|. ...++... .++++|+|=| +.+|
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~-~IDAA~~~~~~~k~yFFkG-------~~yW 512 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------NEYW 512 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCS-SCSBCCEETTTTEEEEEET-------TEEE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCc-cceEEEEECCCCEEEEEec-------CEEE
Confidence 44567899999988 36888876542 233322211 1122 12222222 2578999976 5789
Q ss_pred EEECCCC--cE-EeeecCCCCCCCCcccEEEEE-cCCEEEEEccccCCCCcccceEEEEecCCCceeec---cccCCC-C
Q 006334 107 ILDLESK--EW-MRPECRGAPPSPRESHTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASP---AVKGDI-P 178 (650)
Q Consensus 107 ~yD~~t~--~W-~~l~~~~~~P~~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i---~~~~~l-P 178 (650)
+|+..+- .+ +.+...+-+..+..--++... .++++|+|-|. ..|+||..+++-..- ...... .
T Consensus 513 ry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG~---------~ywryd~~~~~vd~gYPk~i~~~w~G 583 (631)
T 1ck7_A 513 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD---------KFWRYNEVKKKMDPGFPKLIADAWNA 583 (631)
T ss_dssp EEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEETT---------EEEEEETTTTEECTTCCEETTTSCSS
T ss_pred EECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEECC---------EEEEEcCCcccccCCCCcchHhhcCC
Confidence 9985321 11 112111111111111122221 36899999774 488999765432210 000011 1
Q ss_pred CCCCcceeeeec--CEEEEEeccCCCCccCeEEEEECCCC
Q 006334 179 VPRDSHSSNVIA--NRLFVYGGDCGDQYHGDIDMLDMNSL 216 (650)
Q Consensus 179 ~~R~~hs~v~~~--~~Iyv~GG~~~~~~~n~v~~yd~~t~ 216 (650)
.+..-.++...+ +++|+|-| +..|+||..+.
T Consensus 584 ~p~~iDAAf~~~~~g~~YFFkG-------~~Ywr~d~~~~ 616 (631)
T 1ck7_A 584 IPDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSL 616 (631)
T ss_dssp CCTTCCEEECCTTSCBCEEEET-------TEEECCBTTBT
T ss_pred CCCCCcEeEEEcCCCeEEEEEC-------CEEEEEeCccc
Confidence 122223344433 78999988 56778876544
No 268
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=66.59 E-value=72 Score=31.64 Aligned_cols=173 Identities=13% Similarity=0.102 Sum_probs=83.3
Q ss_pred ceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEE
Q 006334 80 SHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLH 159 (650)
Q Consensus 80 ~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~ 159 (650)
.|++++.+++||.+|-... ..+.- -. ........+ .+-..|++++. ++.+|.+|-.....-.....+
T Consensus 34 ~h~~~l~~G~v~~wG~n~~-Gqlg~-p~--~~~~~i~~i-------a~G~~hs~~l~-~G~v~~wG~n~~Gqlg~P~~~- 100 (282)
T 3qhy_B 34 FHGLALKGGKVLGWGANLN-GQLTM-PA--ATQSGVDAI-------AAGNYHSLALK-DGEVIAWGGNEDGQTTVPAEA- 100 (282)
T ss_dssp SEEEEEETTEEEEEECCSS-STTSC-CG--GGGSCCCEE-------EECSSEEEEEE-TTEEEEEECCTTSTTCCCGGG-
T ss_pred CeEEEEECCEEEEEeCCCC-CCCCC-Cc--cCCCCEEEE-------EeCCCEEEEEE-CCEEEEeeCCCCCCCCCCccc-
Confidence 4666666999999984321 21110 00 000112222 23346777775 899999986432111100000
Q ss_pred EEecCCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE
Q 006334 160 VLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI 239 (650)
Q Consensus 160 ~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~ 239 (650)
......+. .-..|+++..++++|.+|-......--. .........+. .-..|+++..
T Consensus 101 -----~~~v~~ia-------~G~~hs~al~~G~v~~wG~n~~gqlg~~----~~~~~~i~~i~-------~G~~~~~~l~ 157 (282)
T 3qhy_B 101 -----RSGVDAIA-------AGAWASYALKDGKVIAWGDDSDGQTTVP----AEAQSGVTALD-------GGVYTALAVK 157 (282)
T ss_dssp -----SSSEEEEE-------EETTEEEEEETTEEEEEECCTTSTTSCC----GGGGSSEEEEE-------ECSSEEEEEE
T ss_pred -----CCCeEEEE-------CcCCEEEEEeCCeEEEecCCCCCcCCCC----ccCCCCeEEEE-------cccCEEEEEE
Confidence 11222222 1234555544899999986433221100 00112233433 1334667777
Q ss_pred CCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCeEEEEcCC
Q 006334 240 GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHAAVVTGSDIVIYGGC 299 (650)
Q Consensus 240 ~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hsav~~~~~lyV~GG~ 299 (650)
++++|.+|-......-.. .........+.. -..|++++.++++|.+|-.
T Consensus 158 ~G~v~~wG~n~~gqlg~p----~~~~~~v~~i~~-------G~~hs~al~~G~v~~wG~n 206 (282)
T 3qhy_B 158 NGGVIAWGDNYFGQTTVP----AEAQSGVDDVAG-------GIFHSLALKDGKVIAWGDN 206 (282)
T ss_dssp TTEEEEEECCTTSTTSCC----GGGGSSEEEEEE-------CSSEEEEEETTEEEEEECC
T ss_pred CCEEEEecCCCCCCCCCc----eecCCCeEEEEe-------cCCEEEEEECCeEEEEECC
Confidence 899999986543221100 000122333332 3356666678899999853
No 269
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=65.81 E-value=1.3e+02 Score=31.25 Aligned_cols=19 Identities=26% Similarity=0.359 Sum_probs=15.4
Q ss_pred CcccEEEEEcCCEEEEEcc
Q 006334 128 RESHTATLVGDDKMVIFGG 146 (650)
Q Consensus 128 R~~hs~~~~~~~~Lyv~GG 146 (650)
-..|++++..++.+|.+|-
T Consensus 181 G~~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 181 GAEHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp CSSEEEEEETTSCEEEEEC
T ss_pred CCCeEEEEeCCCCEEEeeC
Confidence 3468888888899999984
No 270
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=64.77 E-value=1.2e+02 Score=30.43 Aligned_cols=17 Identities=6% Similarity=-0.257 Sum_probs=12.3
Q ss_pred CeEEEEECC-CCcEEEee
Q 006334 206 GDIDMLDMN-SLTWSRLA 222 (650)
Q Consensus 206 n~v~~yd~~-t~~W~~i~ 222 (650)
+.+++||+. +.+...+.
T Consensus 167 ~~v~~~~~~~~g~~~~~~ 184 (365)
T 1jof_A 167 NKLWTHRKLASGEVELVG 184 (365)
T ss_dssp TEEEEEEECTTSCEEEEE
T ss_pred CEEEEEEECCCCCEEEee
Confidence 579999987 67665543
No 271
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=62.57 E-value=1.1e+02 Score=29.24 Aligned_cols=65 Identities=17% Similarity=0.163 Sum_probs=34.5
Q ss_pred CEEEEEccCCCCcccceEEEEECCCC-------cEEEeecCCCCCCCCcceEEEEE-C--CEEEEEcccCCCcCcCeEEE
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTM-------VWSTLATTGQGPGPRDSHSAILW-G--HKMIVFGGTNGYKKVNDLHI 107 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~-------sW~~l~~~g~~P~pR~~hsa~~~-~--~~lyVfGG~~~~~~~ndv~~ 107 (650)
+.+++.|+.++ .+.+||..+. .|..+..... ....-.++.+. + +.+++.|+.++ .+..
T Consensus 71 ~~~l~s~~~dg-----~v~vwd~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~i 138 (351)
T 3f3f_A 71 GRIIASASYDK-----TVKLWEEDPDQEECSGRRWNKLCTLND--SKGSLYSVKFAPAHLGLKLACLGNDG-----ILRL 138 (351)
T ss_dssp CSEEEEEETTS-----CEEEEEECTTSCTTSSCSEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETTC-----EEEE
T ss_pred CCEEEEEcCCC-----eEEEEecCCCcccccccCcceeeeecc--cCCceeEEEEcCCCCCcEEEEecCCC-----cEEE
Confidence 66777777543 5777777653 3444433211 01111223333 3 66777776543 6788
Q ss_pred EECCCCc
Q 006334 108 LDLESKE 114 (650)
Q Consensus 108 yD~~t~~ 114 (650)
||+.+.+
T Consensus 139 wd~~~~~ 145 (351)
T 3f3f_A 139 YDALEPS 145 (351)
T ss_dssp EECSSTT
T ss_pred ecCCChH
Confidence 8877653
No 272
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=62.04 E-value=71 Score=36.23 Aligned_cols=216 Identities=9% Similarity=0.028 Sum_probs=104.6
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCC----cEEeeecCCCCCC
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESK----EWMRPECRGAPPS 126 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~----~W~~l~~~~~~P~ 126 (650)
..+.++++.+..+..+... ...-+++++. ++.||+.- .....|+++++.+. .-..+ .......
T Consensus 386 ~~I~~id~~~~~~~~~~~~-----~~~p~gla~d~~~~~Ly~sD-----~~~~~I~~~~~~g~~~~~~~~~~-i~~~~~~ 454 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPN-----LRNVVALDTEVASNRIYWSD-----LSQRMICSTQLDRAHGVSSYDTV-ISRDIQA 454 (699)
T ss_dssp TC-CEECTTSCCEECCSCC-----CTTCCCCEEETTTTEEEECC-----TTTTSBEEEESCCCCC-CCCCCB-CCSCC--
T ss_pred cceEEEeCCCCcceeeecc-----CcceEEEccccccCeEEEEe-----cCCCeEEEEecCCCCCCcceEEE-EeCCCCC
Confidence 4677788877766654322 2223344443 57888842 22356888988751 11111 0001111
Q ss_pred CCcccEEEEE-cCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeee--ecCEEEEEeccCCCC
Q 006334 127 PRESHTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNV--IANRLFVYGGDCGDQ 203 (650)
Q Consensus 127 ~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~--~~~~Iyv~GG~~~~~ 203 (650)
-.++++. ..+.||+.-.. .+.+++++++...-..+. ...+..|+ .+++ .++.||+.-- .
T Consensus 455 ---P~glavD~~~g~LY~tD~~-------~~~I~v~d~dg~~~~~l~-~~~~~~P~---giavDp~~g~ly~td~----~ 516 (699)
T 1n7d_A 455 ---PDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLF-REQGSKPR---AIVVDPVHGFMYWTDW----G 516 (699)
T ss_dssp ---CCCEECCCSSSBCEECCTT-------TSCEEEEBSSSCCEEEEC-CCSSCCCC---CEECCSSSSCCEECCC----S
T ss_pred ---cceEEEEeeCCcEEEEecc-------CCeEEEEecCCCceEEEE-eCCCCCcc---eEEEccCCCcEEEccc----C
Confidence 1223332 35778885221 246888888765443322 11122221 2222 2567887531 1
Q ss_pred ccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCc
Q 006334 204 YHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGR 281 (650)
Q Consensus 204 ~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R 281 (650)
....+++++++...-..+... .+ ..-..+++. +++||+.= .....|+++|+....-..+... .....
T Consensus 517 ~~~~I~~~~~dG~~~~~l~~~-~l---~~PnGlavd~~~~~LY~aD-----~~~~~I~~~d~dG~~~~~~~~~--~~~~~ 585 (699)
T 1n7d_A 517 TPAKIKKGGLNGVDIYSLVTE-NI---QWPNGITLDLLSGRLYWVD-----SKLHSISSIDVNGGNRKTILED--EKRLA 585 (699)
T ss_dssp SSCCEEBCCSSSCCCCEESCS-SC---SSCCCEEECTTTCCEEEEE-----TTTTEEEEECSSSSCCEEECCC--SSSCS
T ss_pred CCCeEEEEeCCCCCeeEEEeC-CC---CCccEEEEeccCCEEEEEe-----cCCCeEEEEccCCCceEEEEec--CCcCC
Confidence 125788888765433333211 11 111223332 46888873 2346799999876444433221 01112
Q ss_pred ceeEEEEECCeEEEEcCCCCCCCCCCcEEEEec
Q 006334 282 FSHAAVVTGSDIVIYGGCGEDERPLNELLVLQL 314 (650)
Q Consensus 282 ~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l 314 (650)
...++++.++.||+.-.. ...+.+++.
T Consensus 586 ~P~glavd~~~lywtd~~------~~~V~~~d~ 612 (699)
T 1n7d_A 586 HPFSLAVFEDKVFWTDII------NEAIFSANR 612 (699)
T ss_dssp SCCCCEEETTEEEEECST------TTCEEEEET
T ss_pred CceEeEEECCEEEEEeCC------CCeEEEEEc
Confidence 233556677888888421 245666654
No 273
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=61.95 E-value=1.3e+02 Score=29.80 Aligned_cols=64 Identities=11% Similarity=0.219 Sum_probs=35.6
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTM 166 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~ 166 (650)
++.+++.|+.+ ..+..+|+.+.+....- .+ ....-.++....++..++.||.+ ..+.+||+...
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~-~~---h~~~v~~v~~sp~~~~l~s~~~d-------~~i~~wd~~~~ 150 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKRF-VG---HQSEVYSVAFSPDNRQILSAGAE-------REIKLWNILGE 150 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEEE-EC---CCSCEEEEEECSSTTEEEEEETT-------SCEEEEESSSC
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEEE-cC---CCCcEEEEEECCCCCEEEEEcCC-------CEEEEEeccCC
Confidence 56666777654 36788898887643320 11 11112233334466777777763 24777787643
No 274
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=61.62 E-value=44 Score=32.39 Aligned_cols=106 Identities=9% Similarity=0.110 Sum_probs=58.4
Q ss_pred ECCEEEEEcccCCCcCcCeEEEEECCC--CcEE------eeecC-CCCCC---CCcccEEEEE-cCCEEEEEccccCCCC
Q 006334 86 WGHKMIVFGGTNGYKKVNDLHILDLES--KEWM------RPECR-GAPPS---PRESHTATLV-GDDKMVIFGGSGEGEA 152 (650)
Q Consensus 86 ~~~~lyVfGG~~~~~~~ndv~~yD~~t--~~W~------~l~~~-~~~P~---~R~~hs~~~~-~~~~Lyv~GG~~~~~~ 152 (650)
.++++|+|=| +.+|+|+... .... .+... ..+|. +...-++... .++++|+|-|.
T Consensus 71 ~~g~~~fFKg-------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG~----- 138 (227)
T 3lp9_A 71 ENNEAFIFYE-------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKGD----- 138 (227)
T ss_dssp STTEEEEEET-------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEETT-----
T ss_pred CCCEEEEEeC-------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEECC-----
Confidence 5799999987 5789998321 1111 11000 01121 2223334433 36899999874
Q ss_pred cccceEEEEecCCCceee-----ccccCCCCC------CCCcceeee--ecCEEEEEeccCCCCccCeEEEEECCCC
Q 006334 153 NYLNDLHVLDLKTMRWAS-----PAVKGDIPV------PRDSHSSNV--IANRLFVYGGDCGDQYHGDIDMLDMNSL 216 (650)
Q Consensus 153 ~~~~dv~~yd~~t~~Wt~-----i~~~~~lP~------~R~~hs~v~--~~~~Iyv~GG~~~~~~~n~v~~yd~~t~ 216 (650)
..|+||..+++-.. +. ..+|. +..-.++.. .++++|+|-| +..|+||..+.
T Consensus 139 ----~yw~~d~~~~~~~~gyPk~i~--~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 139 ----QYARIDYGSNSMVNKEIKSIS--SGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp ----EEEEEETTTTEESSSSCEEHH--HHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred ----EEEEEeCCCccccCCCCeEHH--HCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 48999976543221 11 01221 122223333 3589999988 67899998765
No 275
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=60.13 E-value=2e+02 Score=31.36 Aligned_cols=194 Identities=11% Similarity=0.072 Sum_probs=95.9
Q ss_pred EEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcEEee
Q 006334 40 VYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEWMRP 118 (650)
Q Consensus 40 IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l 118 (650)
+++.|+.+ ..+.+||..+.+....- .+. ...-.++++. ++++++.|+.++ .+..+|..+.+....
T Consensus 162 ~l~s~s~D-----~~v~lwd~~~~~~~~~l-~~H---~~~V~~v~fspdg~~las~s~D~-----~i~lwd~~~g~~~~~ 227 (611)
T 1nr0_A 162 RIISGSDD-----NTVAIFEGPPFKFKSTF-GEH---TKFVHSVRYNPDGSLFASTGGDG-----TIVLYNGVDGTKTGV 227 (611)
T ss_dssp EEEEEETT-----SCEEEEETTTBEEEEEE-CCC---SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEE
T ss_pred EEEEEeCC-----CeEEEEECCCCeEeeee-ccc---cCceEEEEECCCCCEEEEEECCC-----cEEEEECCCCcEeee
Confidence 45555543 24677776654433221 111 1112233332 677888887654 578888877765432
Q ss_pred ecCCCC---CCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeeecCEEEE
Q 006334 119 ECRGAP---PSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFV 195 (650)
Q Consensus 119 ~~~~~~---P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv 195 (650)
-..... .....-.++....++++++.|+.+ +.+.++|+.+.+....-..+. . .......+..++..++
T Consensus 228 ~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-------~~v~lWd~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~ 298 (611)
T 1nr0_A 228 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-------KTIKIWNVATLKVEKTIPVGT-R-IEDQQLGIIWTKQALV 298 (611)
T ss_dssp CBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECCS-S-GGGCEEEEEECSSCEE
T ss_pred eccccccccccCCCEEEEEECCCCCEEEEEeCC-------CeEEEEeCCCCceeeeecCCC-C-ccceeEEEEEcCCEEE
Confidence 100000 011112233334467778888763 358888988776543211110 0 0111122233555555
Q ss_pred EeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEE--ECCEEEEEeccCCCcccCeEEEEECCCCcEEEe
Q 006334 196 YGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN--IGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQL 271 (650)
Q Consensus 196 ~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~--~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l 271 (650)
.++.+ ..+..+|+.+..-.... .+ ......++. .+++.++.|+.++ .+..||+.+.....+
T Consensus 299 s~s~d-----~~i~~~~~~~~~~~~~~-~g----h~~~v~~l~~spdg~~l~s~s~D~-----~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 299 SISAN-----GFINFVNPELGSIDQVR-YG----HNKAITALSSSADGKTLFSADAEG-----HINSWDISTGISNRV 361 (611)
T ss_dssp EEETT-----CCEEEEETTTTEEEEEE-CC----CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEC
T ss_pred EEeCC-----CcEEEEeCCCCCcceEE-cC----CCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEECCCCceeee
Confidence 55544 35778888776532221 11 111122222 2456677776543 588899988766543
No 276
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=59.10 E-value=1.2e+02 Score=28.73 Aligned_cols=218 Identities=10% Similarity=-0.003 Sum_probs=110.7
Q ss_pred ceEEEEECCCCcEEEe---ecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCC
Q 006334 53 GDVLMLNLDTMVWSTL---ATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSP 127 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l---~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~ 127 (650)
+.++++|+.......+ +.... |. ..-+.+++. ++.||+.-.. .+.+++||+....-..+-. ...
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~-~~-~~~~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~-~~~--- 78 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHI-PA-KVIIGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIR-QDL--- 78 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEE-EE-EEEEEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEEC-TTC---
T ss_pred CeEEEEEecCcccccccceeeecC-CC-CcEEEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEE-CCC---
Confidence 3677888765543211 00000 11 222455554 5789886432 3579999998764333211 111
Q ss_pred CcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCc
Q 006334 128 RESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQY 204 (650)
Q Consensus 128 R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~ 204 (650)
..-+.+++.. ++.||+.-.. .+.++++|++...-..+. ...+..| ..+++. ++.||+..... .
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~-------~~~I~~~~~~g~~~~~~~-~~~~~~P---~~i~vd~~~g~lyv~~~~~---~ 144 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQ-------LDRIEVAKMDGTQRRVLF-DTGLVNP---RGIVTDPVRGNLYWTDWNR---D 144 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEE-CSSCSSE---EEEEEETTTTEEEEEECCS---S
T ss_pred CCccEEEEEecCCeEEEEECC-------CCEEEEEEcCCCCEEEEE-ECCCCCc---cEEEEeeCCCEEEEEECCC---C
Confidence 1223444443 4789986432 246888888654322221 1111111 223332 57899875321 1
Q ss_pred cCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcc
Q 006334 205 HGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRF 282 (650)
Q Consensus 205 ~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~ 282 (650)
.+.+++++++...-..+... .. ..-..++.. +++||+.-- ..+.|++||+....-..+... .. .
T Consensus 145 ~~~I~~~~~dg~~~~~~~~~-~~---~~P~gia~d~~~~~lyv~d~-----~~~~I~~~~~~g~~~~~~~~~--~~---~ 210 (267)
T 1npe_A 145 NPKIETSHMDGTNRRILAQD-NL---GLPNGLTFDAFSSQLCWVDA-----GTHRAECLNPAQPGRRKVLEG--LQ---Y 210 (267)
T ss_dssp SCEEEEEETTSCCCEEEECT-TC---SCEEEEEEETTTTEEEEEET-----TTTEEEEEETTEEEEEEEEEC--CC---S
T ss_pred CcEEEEEecCCCCcEEEEEC-CC---CCCcEEEEcCCCCEEEEEEC-----CCCEEEEEecCCCceEEEecC--CC---C
Confidence 35788999875543333311 11 122333433 468988832 246799999986543333221 11 1
Q ss_pred eeEEEEECCeEEEEcCCCCCCCCCCcEEEEecC
Q 006334 283 SHAAVVTGSDIVIYGGCGEDERPLNELLVLQLG 315 (650)
Q Consensus 283 ~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l~ 315 (650)
-.++++.++.||+.-.. .+.+++++..
T Consensus 211 P~gi~~d~~~lyva~~~------~~~v~~~d~~ 237 (267)
T 1npe_A 211 PFAVTSYGKNLYYTDWK------TNSVIAMDLA 237 (267)
T ss_dssp EEEEEEETTEEEEEETT------TTEEEEEETT
T ss_pred ceEEEEeCCEEEEEECC------CCeEEEEeCC
Confidence 23455567888887432 2456777764
No 277
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=58.83 E-value=4.1 Score=42.42 Aligned_cols=142 Identities=15% Similarity=0.126 Sum_probs=55.3
Q ss_pred EEECCEEEEEcccCCCcCcCeEEEEECCCCc--EEeeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEE
Q 006334 84 ILWGHKMIVFGGTNGYKKVNDLHILDLESKE--WMRPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVL 161 (650)
Q Consensus 84 ~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~--W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~y 161 (650)
++.++.||+. +.+ ..++.+|..+.+ |+.-. .. . . +..++.++.+|+.++.+ ..++++
T Consensus 6 ~v~~~~v~~g-s~d-----g~v~a~d~~tG~~~W~~~~--~~----~-~-s~p~~~~g~~~v~~s~d-------g~l~a~ 64 (369)
T 2hz6_A 6 TLPETLLFVS-TLD-----GSLHAVSKRTGSIKWTLKE--DP----V-L-QVPTHVEEPAFLPDPND-------GSLYTL 64 (369)
T ss_dssp --CTTEEEEE-ETT-----SEEEEEETTTCCEEEEEEC--CC----S-C-CCC-----CCEEECTTT-------CCEEEC
T ss_pred eeeCCEEEEE-cCC-----CEEEEEECCCCCEEEEecC--CC----c-e-ecceEcCCCEEEEeCCC-------CEEEEE
Confidence 3445666664 332 369999988774 87631 11 1 1 11122356677776542 348889
Q ss_pred ecCCC--ceeeccccCCCCCCCCcceeee-ecCEEEEEeccCCCCccCeEEEEECCCCc--EEEeeecCCCCCcccceEE
Q 006334 162 DLKTM--RWASPAVKGDIPVPRDSHSSNV-IANRLFVYGGDCGDQYHGDIDMLDMNSLT--WSRLAIIGSSPGVRAGHAA 236 (650)
Q Consensus 162 d~~t~--~Wt~i~~~~~lP~~R~~hs~v~-~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~--W~~i~~~g~~P~~R~~~s~ 236 (650)
|..++ .|..-. ..+... ..+.+. .++.||+ |+.+ ..++.+|+.+++ |+.-... ..+ .
T Consensus 65 d~~tG~~~w~~~~---~~~~~~-~~sp~~~~~~~v~~-g~~d-----g~v~a~D~~tG~~~w~~~~~~----~~~----~ 126 (369)
T 2hz6_A 65 GSKNNEGLTKLPF---TIPELV-QASPCRSSDGILYM-GKKQ-----DIWYVIDLLTGEKQQTLSSAF----ADS----L 126 (369)
T ss_dssp -----CCSEECSC---CHHHHH-TTCSCC-----CCC-CEEE-----EEEEEECCC------------------------
T ss_pred ECCCCceeeeeec---cCcccc-ccCceEecCCEEEE-EeCC-----CEEEEEECCCCcEEEEecCCC----ccc----c
Confidence 98654 465311 111000 111122 3444543 3322 468889987654 6543210 001 1
Q ss_pred EEECCEEEEEeccCCCcccCeEEEEECCCCc--EEE
Q 006334 237 INIGTKVYIIGGVGDKHYYNDIWILNVSTCS--WSQ 270 (650)
Q Consensus 237 v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~--W~~ 270 (650)
+..++.+|+ |+. -..++.||.++.+ |+.
T Consensus 127 ~p~~~~v~~-~~~-----dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 127 SPSTSLLYL-GRT-----EYTITMYDTKTRELRWNA 156 (369)
T ss_dssp ------EEE-EEE-----EEEEECCCSSSSSCCCEE
T ss_pred cccCCEEEE-Eec-----CCEEEEEECCCCCEEEeE
Confidence 113344554 332 1357888887654 764
No 278
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=58.35 E-value=1.6e+02 Score=29.70 Aligned_cols=182 Identities=12% Similarity=0.116 Sum_probs=91.3
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCccc
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESH 131 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h 131 (650)
..+.++|+.+......... ... -.++++ .++++++.|+. +.+.+++..+......... ......-.
T Consensus 157 ~~i~iwd~~~~~~~~~~~~---~~~--V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~~~~--~~~~~~v~ 223 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIET---RGE--VKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIARKTD--FDKNWSLS 223 (365)
T ss_dssp CEEEEEETTTTEEEEEEEC---SSC--CCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEEECC--CCTTEEEE
T ss_pred CEEEEeECCCCcEEEEeCC---CCc--eEEEEEccCCceEEeccc------eeEEEEEeccCcceeeeec--CCCCCCEE
Confidence 3588899988765443222 111 123333 36677766652 3577788777765432111 11111122
Q ss_pred EEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCeEE
Q 006334 132 TATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGDID 209 (650)
Q Consensus 132 s~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~ 209 (650)
++....++.+++.++.+.. ....++.+|.....+...... .+......-.++.+ ++++++.|+.+ +.+.
T Consensus 224 ~v~fspdg~~l~~~s~d~~---~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~Spdg~~lasgs~D-----~~V~ 294 (365)
T 4h5i_A 224 KINFIADDTVLIAASLKKG---KGIVLTKISIKSGNTSVLRSK-QVTNRFKGITSMDVDMKGELAVLASND-----NSIA 294 (365)
T ss_dssp EEEEEETTEEEEEEEESSS---CCEEEEEEEEETTEEEEEEEE-EEESSCSCEEEEEECTTSCEEEEEETT-----SCEE
T ss_pred EEEEcCCCCEEEEEecCCc---ceeEEeecccccceecceeee-eecCCCCCeEeEEECCCCCceEEEcCC-----CEEE
Confidence 3334457888888776422 122456667665554432110 11111111122222 57788888865 4789
Q ss_pred EEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCC
Q 006334 210 MLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 210 ~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
+||..+.+-...- +..-.....++.+ ++++++.|+.+ ..+.++|+..
T Consensus 295 iwd~~~~~~~~~~----~~gH~~~V~~v~fSpdg~~laS~S~D-----~tvrvw~ip~ 343 (365)
T 4h5i_A 295 LVKLKDLSMSKIF----KQAHSFAITEVTISPDSTYVASVSAA-----NTIHIIKLPL 343 (365)
T ss_dssp EEETTTTEEEEEE----TTSSSSCEEEEEECTTSCEEEEEETT-----SEEEEEECCT
T ss_pred EEECCCCcEEEEe----cCcccCCEEEEEECCCCCEEEEEeCC-----CeEEEEEcCC
Confidence 9998876533211 0011111223333 56777777654 3577777754
No 279
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=57.70 E-value=1.6e+02 Score=29.62 Aligned_cols=142 Identities=8% Similarity=0.042 Sum_probs=69.1
Q ss_pred eEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEE
Q 006334 54 DVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTA 133 (650)
Q Consensus 54 dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~ 133 (650)
.+.+++..+........... ........+...+++.++.++.++... ..++.+|.....+..............-.++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~fspdg~~l~~~s~d~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~ 275 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFD-KNWSLSKINFIADDTVLIAASLKKGKG-IVLTKISIKSGNTSVLRSKQVTNRFKGITSM 275 (365)
T ss_dssp CEEEEETTTCCEEEEECCCC-TTEEEEEEEEEETTEEEEEEEESSSCC-EEEEEEEEETTEEEEEEEEEEESSCSCEEEE
T ss_pred eEEEEEeccCcceeeeecCC-CCCCEEEEEEcCCCCEEEEEecCCcce-eEEeecccccceecceeeeeecCCCCCeEeE
Confidence 45566666555433222110 111112222334788888887654321 2456667666554332111000011112234
Q ss_pred EEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCC-cceeeee--cCEEEEEeccCCCCccCeEEE
Q 006334 134 TLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRD-SHSSNVI--ANRLFVYGGDCGDQYHGDIDM 210 (650)
Q Consensus 134 ~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~-~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~ 210 (650)
+...++++++.|+.+ +.+.+||..+.+-... +..... .-..+.+ ++++++-|+.+ +.+.+
T Consensus 276 ~~Spdg~~lasgs~D-------~~V~iwd~~~~~~~~~-----~~~gH~~~V~~v~fSpdg~~laS~S~D-----~tvrv 338 (365)
T 4h5i_A 276 DVDMKGELAVLASND-------NSIALVKLKDLSMSKI-----FKQAHSFAITEVTISPDSTYVASVSAA-----NTIHI 338 (365)
T ss_dssp EECTTSCEEEEEETT-------SCEEEEETTTTEEEEE-----ETTSSSSCEEEEEECTTSCEEEEEETT-----SEEEE
T ss_pred EECCCCCceEEEcCC-------CEEEEEECCCCcEEEE-----ecCcccCCEEEEEECCCCCEEEEEeCC-----CeEEE
Confidence 444578888888874 3588899887653221 111111 1122222 56777777765 46777
Q ss_pred EECC
Q 006334 211 LDMN 214 (650)
Q Consensus 211 yd~~ 214 (650)
+|+.
T Consensus 339 w~ip 342 (365)
T 4h5i_A 339 IKLP 342 (365)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8764
No 280
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=56.99 E-value=1.5e+02 Score=30.65 Aligned_cols=148 Identities=14% Similarity=0.087 Sum_probs=79.0
Q ss_pred cCeEEEEECCC--CcEEeeecCCC-CC-CCCcccEEEEEc--CC--EEEEEccccCCCCcccceEEEEecCCCceeeccc
Q 006334 102 VNDLHILDLES--KEWMRPECRGA-PP-SPRESHTATLVG--DD--KMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAV 173 (650)
Q Consensus 102 ~ndv~~yD~~t--~~W~~l~~~~~-~P-~~R~~hs~~~~~--~~--~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~ 173 (650)
.-.+++||+++ .+-+++...+. .. ..-.-|.+.+.. ++ +|||+.-.. ....-+++.+|........+..
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~---~~s~ielf~~d~~~~~~~~~~~ 158 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG---SSSTVEVFKFQEEEKSLLHLKT 158 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST---TCCEEEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC---CCCeEEEEEEECCCCEEEEEec
Confidence 45699999984 45666655542 21 223345555543 23 577774431 1223456667776666555443
Q ss_pred cCCCCCCCCcceeeeecCEEEEEec-cCCC-----------CccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--
Q 006334 174 KGDIPVPRDSHSSNVIANRLFVYGG-DCGD-----------QYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-- 239 (650)
Q Consensus 174 ~~~lP~~R~~hs~v~~~~~Iyv~GG-~~~~-----------~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-- 239 (650)
....+..+.+-..+.-++.+|+-+. +..+ .....+++||+. +.+.+.. . ......+.+
T Consensus 159 ~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~--~----l~~pNGia~sp 230 (355)
T 3sre_A 159 IRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAE--G----FDFANGINISP 230 (355)
T ss_dssp ECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEE--E----ESSEEEEEECT
T ss_pred cccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeec--C----CcccCcceECC
Confidence 3333344444445555688887553 2111 234578999984 3444331 1 111222222
Q ss_pred C-CEEEEEeccCCCcccCeEEEEECCC
Q 006334 240 G-TKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 240 ~-~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
+ ..+|+.- .....+|+|++..
T Consensus 231 Dg~~lYvad-----t~~~~I~~~~~~~ 252 (355)
T 3sre_A 231 DGKYVYIAE-----LLAHKIHVYEKHA 252 (355)
T ss_dssp TSSEEEEEE-----GGGTEEEEEEECT
T ss_pred CCCEEEEEe-----CCCCeEEEEEECC
Confidence 3 3788873 2346899999864
No 281
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=56.42 E-value=89 Score=34.70 Aligned_cols=202 Identities=10% Similarity=0.017 Sum_probs=95.2
Q ss_pred ceEEEEECCCCcE---EEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCC--
Q 006334 53 GDVLMLNLDTMVW---STLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSP-- 127 (650)
Q Consensus 53 ~dv~~yD~~t~sW---~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~-- 127 (650)
..++++|..+++. ..+. ......+..-+++.++++. -++++++|..+..-..+...+....-
T Consensus 90 ~~i~~~d~~~g~~~~~~~l~-------~~~~~~~~SPDG~~la~~~------~~~i~~~~~~~g~~~~l~~~~~~~~v~~ 156 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNELP-------RPIQYLCWSPVGSKLAYVY------QNNIYLKQRPGDPPFQITFNGRENKIFN 156 (719)
T ss_dssp EEEEEEETTTTEECCSSCCC-------SSBCCEEECSSTTCEEEEE------TTEEEEESSTTSCCEECCCCCBTTTEEE
T ss_pred eEEEEEECCCCccccceecC-------cccccceECCCCCEEEEEE------CCeEEEEeCCCCCcEEEecCCCcCCeEc
Confidence 5789999988865 3221 1222233334665555552 14789999888766554211111000
Q ss_pred ------------CcccEEEEEcCCEEEEEccccCCCC---------------------------cccceEEEEecCCCce
Q 006334 128 ------------RESHTATLVGDDKMVIFGGSGEGEA---------------------------NYLNDLHVLDLKTMRW 168 (650)
Q Consensus 128 ------------R~~hs~~~~~~~~Lyv~GG~~~~~~---------------------------~~~~dv~~yd~~t~~W 168 (650)
....+.....|++.++++..++... .....++++|+.+..-
T Consensus 157 g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~ 236 (719)
T 1z68_A 157 GIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAY 236 (719)
T ss_dssp SSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHH
T ss_pred ccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCc
Confidence 0012344445677676665432110 1223788888877652
Q ss_pred ---eeccccCCCC-CCCCcceeeee-cCEEEEEeccCCCCccCeEEEEE----CCCCcEEEeee---cCCCCCcccc---
Q 006334 169 ---ASPAVKGDIP-VPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLD----MNSLTWSRLAI---IGSSPGVRAG--- 233 (650)
Q Consensus 169 ---t~i~~~~~lP-~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd----~~t~~W~~i~~---~g~~P~~R~~--- 233 (650)
..+.....+. .......++.. ++++++.... .......++.+| +.+.++..+.. .+. .....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~ 313 (719)
T 1z68_A 237 VGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK-RVQNVSVLSICDFREDWQTWDCPKTQEHIEESR--TGWAGGFF 313 (719)
T ss_dssp HCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE-SSTTEEEEEEEEECSSSSSEECCGGGEEEEECS--SSCSSSSS
T ss_pred cceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec-cccCeEEEEEEcccCCCCCCceEEEEecccccC--CceEcccc
Confidence 2222000000 01111122211 4565554221 112235788999 77766554431 111 01111
Q ss_pred --eEEEEECC-EEEEEeccCCCcccCeEEEEECCCCcEEEee
Q 006334 234 --HAAINIGT-KVYIIGGVGDKHYYNDIWILNVSTCSWSQLD 272 (650)
Q Consensus 234 --~s~v~~~~-~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~ 272 (650)
.....-++ .|++.....+ ....+|.+|+.+.....+.
T Consensus 314 ~~~~~~spdg~~l~~~~~~~~--g~~~l~~~~~~~~~~~~lt 353 (719)
T 1z68_A 314 VSTPVFSYDAISYYKIFSDKD--GYKHIHYIKDTVENAIQIT 353 (719)
T ss_dssp CCCCEECTTSSCEEEEEECTT--SCEEEEEESSCSTTCEECS
T ss_pred CCccEECCCCCeEEEEEEccC--CceEEEEEECCCCceEecc
Confidence 11222344 4555333222 2467999999888866654
No 282
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=55.62 E-value=1.8e+02 Score=29.45 Aligned_cols=203 Identities=9% Similarity=0.001 Sum_probs=110.6
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcc
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRES 130 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~ 130 (650)
++++++++.......+... ...-.++++. ++.||+.-- ..+.++++++.....+.+-.. ....|
T Consensus 53 ~~I~~i~~~g~~~~~~~~~-----~~~~~~l~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~-~~~~p--- 118 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN-----LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVST-GLESP--- 118 (349)
T ss_dssp SCEEEECTTSCCEEEEECS-----CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEECS-SCSCC---
T ss_pred cceEEEeCCCCeeEEeecC-----CCceEEEEEeccccEEEEEec-----cCCceEEEecCCCCceEEEeC-CCCCc---
Confidence 4688888888777665432 1223344443 578988632 235799999988765554211 11111
Q ss_pred cEEEEE-cCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCe
Q 006334 131 HTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGD 207 (650)
Q Consensus 131 hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~ 207 (650)
.++++. .++.||+.-.. .+.+++++++...-..+. ...+..| ..+++. ++.||+.--.. ...
T Consensus 119 ~glavd~~~g~ly~~d~~-------~~~I~~~~~dG~~~~~l~-~~~l~~P---~~iavdp~~g~ly~td~~~----~~~ 183 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSG-------TSRIEVANLDGAHRKVLL-WQSLEKP---RAIALHPMEGTIYWTDWGN----TPR 183 (349)
T ss_dssp CEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEE-CTTCSCE---EEEEEETTTTEEEEEECSS----SCE
T ss_pred cEEEEecCCCeEEEEcCC-------CCeEEEEcCCCCceEEEE-eCCCCCc---ceEEEecCcCeEEEeccCC----CCE
Confidence 234443 35788886432 246888888754333221 1122222 123332 57888874321 367
Q ss_pred EEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCcceeE
Q 006334 208 IDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGRFSHA 285 (650)
Q Consensus 208 v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R~~hs 285 (650)
+++++++...-+.+... . -..-..+++. +++||+.= .....|+++|+....-..+-.. .+ ..-.+
T Consensus 184 I~r~~~dG~~~~~~~~~-~---~~~PnGla~d~~~~~lY~aD-----~~~~~I~~~~~dG~~~~~~~~~-~~---~~P~g 250 (349)
T 3v64_C 184 IEASSMDGSGRRIIADT-H---LFWPNGLTIDYAGRRMYWVD-----AKHHVIERANLDGSHRKAVISQ-GL---PHPFA 250 (349)
T ss_dssp EEEEETTSCSCEESCCS-S---CSCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSCEEEECS-SC---SSEEE
T ss_pred EEEEeCCCCCcEEEEEC-C---CCCcceEEEeCCCCEEEEEE-----CCCCEEEEEeCCCCceEEEEeC-CC---CCceE
Confidence 99999876544443211 1 1112233332 57899982 2346799999876443333211 11 12345
Q ss_pred EEEECCeEEEEc
Q 006334 286 AVVTGSDIVIYG 297 (650)
Q Consensus 286 av~~~~~lyV~G 297 (650)
+++.++.||+.-
T Consensus 251 iav~~~~ly~td 262 (349)
T 3v64_C 251 ITVFEDSLYWTD 262 (349)
T ss_dssp EEEETTEEEEEE
T ss_pred EEEECCEEEEec
Confidence 666788899884
No 283
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=55.42 E-value=1.2e+02 Score=29.23 Aligned_cols=61 Identities=15% Similarity=0.280 Sum_probs=37.6
Q ss_pred cCEEEEEeccCCCCccCeEEEEECCCCcEEE-----eeecCCCCC------cccceEEEE--ECCEEEEEeccCCCcccC
Q 006334 190 ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSR-----LAIIGSSPG------VRAGHAAIN--IGTKVYIIGGVGDKHYYN 256 (650)
Q Consensus 190 ~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~-----i~~~g~~P~------~R~~~s~v~--~~~~IyI~GG~~~~~~~~ 256 (650)
++++|+|-| +..|+||..+++-.. +. . ..|. +..-.++.. .++++|+|-| +
T Consensus 129 ~~k~yfFkG-------~~yw~~d~~~~~~~~gyPk~i~-~-g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~ 192 (227)
T 3lp9_A 129 GKEVYLFKG-------DQYARIDYGSNSMVNKEIKSIS-S-GYPCFRNTIFESGADAAFASHKTNEVYFFKD-------D 192 (227)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEESSSSCEEHH-H-HCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------T
T ss_pred CCEEEEEEC-------CEEEEEeCCCccccCCCCeEHH-H-CCCCccccccCCCccEEEEcCCCceEEEEEC-------C
Confidence 589999988 689999987553211 11 0 1121 122233333 3479999976 4
Q ss_pred eEEEEECCCC
Q 006334 257 DIWILNVSTC 266 (650)
Q Consensus 257 dv~~yD~~t~ 266 (650)
.-|+||..+.
T Consensus 193 ~Ywr~d~~~~ 202 (227)
T 3lp9_A 193 HYARVKVTPX 202 (227)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEECCcc
Confidence 7899998765
No 284
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=55.36 E-value=2e+02 Score=29.87 Aligned_cols=19 Identities=16% Similarity=0.361 Sum_probs=15.5
Q ss_pred cccEEEEEcCCEEEEEccc
Q 006334 129 ESHTATLVGDDKMVIFGGS 147 (650)
Q Consensus 129 ~~hs~~~~~~~~Lyv~GG~ 147 (650)
..|++++..++.+|.+|-.
T Consensus 130 ~~h~~alt~~G~v~~wG~n 148 (406)
T 4d9s_A 130 DSHCLAVTMEGEVQSWGRN 148 (406)
T ss_dssp SSEEEEEETTSCEEEEECC
T ss_pred hhheEEEcCCCcEEEeCCC
Confidence 4788888888999999854
No 285
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=55.16 E-value=2.5e+02 Score=30.98 Aligned_cols=157 Identities=8% Similarity=-0.014 Sum_probs=71.8
Q ss_pred eEEEEECCCCc---EEeeecCCCC-CCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEe----cCCCceeeccc--
Q 006334 104 DLHILDLESKE---WMRPECRGAP-PSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLD----LKTMRWASPAV-- 173 (650)
Q Consensus 104 dv~~yD~~t~~---W~~l~~~~~~-P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd----~~t~~Wt~i~~-- 173 (650)
+++++|+.+.+ |..+...... .............++++++.... . ......++++| +.+.++..+..
T Consensus 225 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~-~--~~~~~~l~~~d~~~~~~~g~~~~~~~~~ 301 (719)
T 1z68_A 225 RIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK-R--VQNVSVLSICDFREDWQTWDCPKTQEHI 301 (719)
T ss_dssp EEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE-S--STTEEEEEEEEECSSSSSEECCGGGEEE
T ss_pred EEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec-c--ccCeEEEEEEcccCCCCCCceEEEEecc
Confidence 78889988765 2333100000 01111223333346776665321 1 11235789999 77776655431
Q ss_pred -cCCCCCCCCc---c-eeee-ecC-EEEEEec-cCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEE
Q 006334 174 -KGDIPVPRDS---H-SSNV-IAN-RLFVYGG-DCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYI 245 (650)
Q Consensus 174 -~~~lP~~R~~---h-s~v~-~~~-~Iyv~GG-~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI 245 (650)
.+ ...... + .... -++ .+++... .++ ...++.+|+.+.....+.. ...... ......++.||.
T Consensus 302 ~~~--~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g---~~~l~~~~~~~~~~~~lt~---~~~~v~-~~~~~d~~~i~~ 372 (719)
T 1z68_A 302 EES--RTGWAGGFFVSTPVFSYDAISYYKIFSDKDG---YKHIHYIKDTVENAIQITS---GKWEAI-NIFRVTQDSLFY 372 (719)
T ss_dssp EEC--SSSCSSSSSCCCCEECTTSSCEEEEEECTTS---CEEEEEESSCSTTCEECSC---SSSCEE-EEEEECSSEEEE
T ss_pred ccc--CCceEccccCCccEECCCCCeEEEEEEccCC---ceEEEEEECCCCceEeccc---CceEEE-EEEEEeCCEEEE
Confidence 01 011111 1 2222 233 4544332 222 3579999998877665541 111111 112223345555
Q ss_pred Eecc-CCCcccCeEEEEECCCC--cEEEee
Q 006334 246 IGGV-GDKHYYNDIWILNVSTC--SWSQLD 272 (650)
Q Consensus 246 ~GG~-~~~~~~~dv~~yD~~t~--~W~~l~ 272 (650)
.+.. ........+|..++.+. ..+.+.
T Consensus 373 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~ 402 (719)
T 1z68_A 373 SSNEFEEYPGRRNIYRISIGSYPPSKKCVT 402 (719)
T ss_dssp EESCGGGCTTCBEEEEEECSSSSCCEEESS
T ss_pred EEecCCCCCceEEEEEEeCCCCCCCceecc
Confidence 5432 02223456888888655 345553
No 286
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=54.88 E-value=1.5e+02 Score=28.26 Aligned_cols=58 Identities=14% Similarity=0.205 Sum_probs=34.9
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEE-ECCEEEEEcccCCCcCcCeEEEEECCCCcEEe
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAIL-WGHKMIVFGGTNGYKKVNDLHILDLESKEWMR 117 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~-~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~ 117 (650)
+.+.++|..+++...+-.... . ...-.++++ .+++.++.|+.++ .+..+|..+.+-..
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~-~-~~~V~~v~~~~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQ-P-GEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLR 103 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCS-T-TCCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEE
T ss_pred CEEEEEECCCCCEEEEEEecC-C-CCeEEEEEECCCCCEEEEEECCC-----cEEEeecCCceeEE
Confidence 468999999988765433211 1 111122333 2677788887654 57888888876433
No 287
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=54.12 E-value=1.5e+02 Score=28.19 Aligned_cols=110 Identities=9% Similarity=0.044 Sum_probs=55.0
Q ss_pred CCEEEEEccCCCCcccceEEEEECCC--CcEEEeecCCCCCCCCcceEEEEE---CCEEEEEcccCCCcCcCeEEEEECC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDT--MVWSTLATTGQGPGPRDSHSAILW---GHKMIVFGGTNGYKKVNDLHILDLE 111 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t--~sW~~l~~~g~~P~pR~~hsa~~~---~~~lyVfGG~~~~~~~ndv~~yD~~ 111 (650)
++.+++.|+.+ ..+.+||..+ ..|..+..... ....-.++.+. ++.+++.|+.++ .+.+||+.
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~d~~~l~s~~~dg-----~v~vwd~~ 89 (351)
T 3f3f_A 22 YGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRA--HDSSIVAIDWASPEYGRIIASASYDK-----TVKLWEED 89 (351)
T ss_dssp SSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEEC--CSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEEC
T ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCcceecceecc--CCCcEEEEEEcCCCCCCEEEEEcCCC-----eEEEEecC
Confidence 45666667643 3577777764 34444332211 01112233333 367778887643 46777776
Q ss_pred CC-------cEEeeecCCCCCCCCcccEEEEEcC--CEEEEEccccCCCCcccceEEEEecCCCc
Q 006334 112 SK-------EWMRPECRGAPPSPRESHTATLVGD--DKMVIFGGSGEGEANYLNDLHVLDLKTMR 167 (650)
Q Consensus 112 t~-------~W~~l~~~~~~P~~R~~hs~~~~~~--~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~ 167 (650)
+. .|..+..... ....-.++....+ +.+++.|+.+ ..+.+||+.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d-------g~v~iwd~~~~~ 145 (351)
T 3f3f_A 90 PDQEECSGRRWNKLCTLND--SKGSLYSVKFAPAHLGLKLACLGND-------GILRLYDALEPS 145 (351)
T ss_dssp TTSCTTSSCSEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETT-------CEEEEEECSSTT
T ss_pred CCcccccccCcceeeeecc--cCCceeEEEEcCCCCCcEEEEecCC-------CcEEEecCCChH
Confidence 53 3444321111 1111223333334 6677777753 357888876543
No 288
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=52.09 E-value=95 Score=34.93 Aligned_cols=154 Identities=11% Similarity=0.102 Sum_probs=76.4
Q ss_pred EEEEECCEEEEEcccCCCcCcCeEEEEECCCC-cEEeeecCCCCC-CCCcccEEEEE-cCCEEEEEccccCCCCcccceE
Q 006334 82 SAILWGHKMIVFGGTNGYKKVNDLHILDLESK-EWMRPECRGAPP-SPRESHTATLV-GDDKMVIFGGSGEGEANYLNDL 158 (650)
Q Consensus 82 sa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~-~W~~l~~~~~~P-~~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv 158 (650)
+++..++++|+|=| +.+|+++.... ......+....| .+..--++... .++++|+|=|. ..
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~~IDAA~~~~~~~k~yFFkG~---------~y 511 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGN---------EY 511 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCSSCSBCCEETTTTEEEEEETT---------EE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCccceEEEEECCCCEEEEEecC---------EE
Confidence 44556889999987 46788876542 222221211111 11212223323 35789999764 48
Q ss_pred EEEecCCC--ce-eeccccCCCCC--CCCcceee-eecCEEEEEeccCCCCccCeEEEEECCCCcEEEe--eecC-CCC-
Q 006334 159 HVLDLKTM--RW-ASPAVKGDIPV--PRDSHSSN-VIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRL--AIIG-SSP- 228 (650)
Q Consensus 159 ~~yd~~t~--~W-t~i~~~~~lP~--~R~~hs~v-~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i--~~~g-~~P- 228 (650)
|+|+..+. .+ ..|... .+|. .....+.. ..++++|+|-| +..|+||..+..-..- ..+. ..+
T Consensus 512 Wry~~~~l~~GYPk~Is~~-G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~~w~G 583 (631)
T 1ck7_A 512 WIYSASTLERGYPKPLTSL-GLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNA 583 (631)
T ss_dssp EEEETTEECTTCCEEGGGG-TCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTTSCSS
T ss_pred EEECCCccccCCCccchhc-CCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHhhcCC
Confidence 88874211 11 011111 1221 12222222 13689999988 6899999776532110 0000 111
Q ss_pred CcccceEEEEEC--CEEEEEeccCCCcccCeEEEEECCCC
Q 006334 229 GVRAGHAAINIG--TKVYIIGGVGDKHYYNDIWILNVSTC 266 (650)
Q Consensus 229 ~~R~~~s~v~~~--~~IyI~GG~~~~~~~~dv~~yD~~t~ 266 (650)
.+..-.++.... +++|+|-| +..|+||..+.
T Consensus 584 ~p~~iDAAf~~~~~g~~YFFkG-------~~Ywr~d~~~~ 616 (631)
T 1ck7_A 584 IPDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSL 616 (631)
T ss_dssp CCTTCCEEECCTTSCBCEEEET-------TEEECCBTTBT
T ss_pred CCCCCcEeEEEcCCCeEEEEEC-------CEEEEEeCccc
Confidence 112223344433 68999976 35677777554
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=50.59 E-value=2.1e+02 Score=32.37 Aligned_cols=151 Identities=13% Similarity=0.071 Sum_probs=78.3
Q ss_pred ECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecC
Q 006334 86 WGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLK 164 (650)
Q Consensus 86 ~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~ 164 (650)
.+++||+.- ...+.|+++|+....-+.+- ......|+ .+++.. ++.||+.--. ....+++++++
T Consensus 463 ~~g~LY~tD-----~~~~~I~v~d~dg~~~~~l~-~~~~~~P~---giavDp~~g~ly~td~~------~~~~I~~~~~d 527 (699)
T 1n7d_A 463 IHSNIYWTD-----SVLGTVSVADTKGVKRKTLF-REQGSKPR---AIVVDPVHGFMYWTDWG------TPAKIKKGGLN 527 (699)
T ss_dssp SSSBCEECC-----TTTSCEEEEBSSSCCEEEEC-CCSSCCCC---CEECCSSSSCCEECCCS------SSCCEEBCCSS
T ss_pred eCCcEEEEe-----ccCCeEEEEecCCCceEEEE-eCCCCCcc---eEEEccCCCcEEEcccC------CCCeEEEEeCC
Confidence 367888842 22457899998876544431 11112222 233322 4677764310 12468888775
Q ss_pred CCceeeccccCCCCCCCCcceeee--ecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCE
Q 006334 165 TMRWASPAVKGDIPVPRDSHSSNV--IANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTK 242 (650)
Q Consensus 165 t~~Wt~i~~~~~lP~~R~~hs~v~--~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~ 242 (650)
...-..+. ...+..| ..+++ .++.||+.-.. .+.|+++|+....-..+... ........++++.++.
T Consensus 528 G~~~~~l~-~~~l~~P---nGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~--~~~~~~P~glavd~~~ 596 (699)
T 1n7d_A 528 GVDIYSLV-TENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILED--EKRLAHPFSLAVFEDK 596 (699)
T ss_dssp SCCCCEES-CSSCSSC---CCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCC--SSSCSSCCCCEEETTE
T ss_pred CCCeeEEE-eCCCCCc---cEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEec--CCcCCCceEeEEECCE
Confidence 43332221 1112111 12332 25789987532 36899999876444443311 1111223455667888
Q ss_pred EEEEeccCCCcccCeEEEEECCCCc
Q 006334 243 VYIIGGVGDKHYYNDIWILNVSTCS 267 (650)
Q Consensus 243 IyI~GG~~~~~~~~dv~~yD~~t~~ 267 (650)
||+.- .....|+++|..+.+
T Consensus 597 lywtd-----~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 597 VFWTD-----IINEAIFSANRLTGS 616 (699)
T ss_dssp EEEEC-----STTTCEEEEETTTEE
T ss_pred EEEEe-----CCCCeEEEEEccCCC
Confidence 99883 224579999987654
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=50.06 E-value=2.4e+02 Score=29.21 Aligned_cols=204 Identities=10% Similarity=0.044 Sum_probs=108.2
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCC----cEEeeecCCCCCC
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESK----EWMRPECRGAPPS 126 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~----~W~~l~~~~~~P~ 126 (650)
+++.++|+....+..+... ...-.++++. +++||+.-- ..+.++++++... ....+-.. ..
T Consensus 92 ~~I~~i~l~~~~~~~~~~~-----~~~~~~l~~d~~~~~lywsD~-----~~~~I~~~~~~g~~~~~~~~~~~~~-~~-- 158 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPN-----LRNVVALDTEVASNRIYWSDL-----SQRMICSTQLDRAHGVSSYDTVISR-DI-- 158 (400)
T ss_dssp TEEEEECTTSCSCEEEECS-----CSCEEEEEEETTTTEEEEEET-----TTTEEEEEEC------CCCEEEECS-SC--
T ss_pred ceeEEEccCCcceeEeccc-----cCcceEEeeeeccCceEEEec-----CCCeEEEEEcccCCCCCcceEEEeC-CC--
Confidence 5788888887777766432 2333455554 588998632 2356888988752 22222110 11
Q ss_pred CCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCC
Q 006334 127 PRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQ 203 (650)
Q Consensus 127 ~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~ 203 (650)
..-.++++.. .+.||+.-.. .+.+++++++...-..+. ...+..| ..+++. ++.||+.--.
T Consensus 159 -~~p~glavD~~~~~lY~~d~~-------~~~I~~~~~~g~~~~~l~-~~~~~~P---~~iavdp~~g~ly~td~~---- 222 (400)
T 3p5b_L 159 -QAPDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLF-RENGSKP---RAIVVDPVHGFMYWTDWG---- 222 (400)
T ss_dssp -SCEEEEEEETTTTEEEEEETT-------TTEEEEECTTTCSEEEEE-ECSSCCE---EEEEEETTTTEEEEEECS----
T ss_pred -CCcccEEEEecCCceEEEECC-------CCeEEEEeCCCCceEEEE-eCCCCCc---ceEEEecccCeEEEEeCC----
Confidence 1122334432 6889987432 246888888765544332 1122222 123332 5788886421
Q ss_pred ccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcEEEe-ecCCCCCCC
Q 006334 204 YHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQL-DTCGQQPQG 280 (650)
Q Consensus 204 ~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l-~~~~~~p~~ 280 (650)
....+++++++...-..+... .+ ..-..+++. +++||+.= .....|+++|+....-..+ .....+
T Consensus 223 ~~~~I~~~~~dG~~~~~~~~~-~l---~~P~glavd~~~~~lY~aD-----~~~~~I~~~d~dG~~~~~~~~~~~~l--- 290 (400)
T 3p5b_L 223 TPAKIKKGGLNGVDIYSLVTE-NI---QWPNGITLDLLSGRLYWVD-----SKLHSISSIDVNGGNRKTILEDEKRL--- 290 (400)
T ss_dssp SSCCEEEEETTSCSCEEEECS-SC---SCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCCCEEEEECSSTT---
T ss_pred CCCEEEEEeCCCCccEEEEEC-CC---CceEEEEEEeCCCEEEEEE-----CCCCEEEEEeCCCCccEEEEeCCCCC---
Confidence 125799999876543333211 11 112233333 56899982 2346899999986543333 221112
Q ss_pred cceeEEEEECCeEEEEc
Q 006334 281 RFSHAAVVTGSDIVIYG 297 (650)
Q Consensus 281 R~~hsav~~~~~lyV~G 297 (650)
....++++.++.||+.-
T Consensus 291 ~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 291 AHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp SSEEEEEEETTEEEEEE
T ss_pred CCCEEEEEeCCEEEEec
Confidence 22346667788899884
No 291
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=49.39 E-value=2e+02 Score=28.12 Aligned_cols=145 Identities=12% Similarity=0.118 Sum_probs=70.3
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCcE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKEW 115 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~W 115 (650)
++..++.|+.+ ..+.+||..+++-...-.. . ...-.++.+. ++.+++.|+.++ .+.++|+....-
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~~~~~-h---~~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd~~~~~~ 141 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQRFVG-H---KSDVMSVDIDKKASMIISGSRDK-----TIKVWTIKGQCL 141 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEEC-C---SSCEEEEEECTTSCEEEEEETTS-----CEEEEETTSCEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeEEEcc-C---CCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCeE
Confidence 34555555543 3688899887754322111 1 0111222222 567777777654 466777765433
Q ss_pred EeeecCCCCCCCCcccEEEEEc------CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCc-ceeee
Q 006334 116 MRPECRGAPPSPRESHTATLVG------DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDS-HSSNV 188 (650)
Q Consensus 116 ~~l~~~~~~P~~R~~hs~~~~~------~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~-hs~v~ 188 (650)
..+. + . ...-..+.... ++.+++.|+.+ ..+.+||+.+.+-...- ...... .+++.
T Consensus 142 ~~~~--~-h--~~~v~~~~~~~~~~~~~~~~~l~s~~~d-------~~i~~wd~~~~~~~~~~-----~~h~~~v~~~~~ 204 (319)
T 3frx_A 142 ATLL--G-H--NDWVSQVRVVPNEKADDDSVTIISAGND-------KMVKAWNLNQFQIEADF-----IGHNSNINTLTA 204 (319)
T ss_dssp EEEC--C-C--SSCEEEEEECCC------CCEEEEEETT-------SCEEEEETTTTEEEEEE-----CCCCSCEEEEEE
T ss_pred EEEe--c-c--CCcEEEEEEccCCCCCCCccEEEEEeCC-------CEEEEEECCcchhheee-----cCCCCcEEEEEE
Confidence 3321 0 0 00111112111 23356666653 24778888765433211 101111 12222
Q ss_pred e-cCEEEEEeccCCCCccCeEEEEECCCCc
Q 006334 189 I-ANRLFVYGGDCGDQYHGDIDMLDMNSLT 217 (650)
Q Consensus 189 ~-~~~Iyv~GG~~~~~~~n~v~~yd~~t~~ 217 (650)
. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 205 sp~g~~l~s~~~d-----g~i~iwd~~~~~ 229 (319)
T 3frx_A 205 SPDGTLIASAGKD-----GEIMLWNLAAKK 229 (319)
T ss_dssp CTTSSEEEEEETT-----CEEEEEETTTTE
T ss_pred cCCCCEEEEEeCC-----CeEEEEECCCCc
Confidence 2 46777777765 478889988765
No 292
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=48.84 E-value=2.5e+02 Score=29.26 Aligned_cols=120 Identities=9% Similarity=0.002 Sum_probs=63.3
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-C-CEEEEEcccCC---C-cCcCeEEEEEC
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-G-HKMIVFGGTNG---Y-KKVNDLHILDL 110 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~-~~lyVfGG~~~---~-~~~ndv~~yD~ 110 (650)
++.+|+.-... ....+.++++|..+.+-...-..+.. .+ +++. + ..+||...+.. . ...+.+.+||.
T Consensus 44 ~~~vyV~~~~~-~~~~~~V~ViD~~t~~v~~~I~vG~~-----P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 44 ARRVYVNDPAH-FAAVTQQFVIDGEAGRVIGMIDGGFL-----PN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp TTEEEEEECGG-GCSSEEEEEEETTTTEEEEEEEECSS-----CE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCEEEEEcCcc-cCCCCEEEEEECCCCeEEEEEECCCC-----Cc-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 45677754321 11236899999998775433233222 24 4443 3 46888653211 0 12467999999
Q ss_pred CCCcEEe-eecCC--CCCCCCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecCCCcee
Q 006334 111 ESKEWMR-PECRG--APPSPRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLKTMRWA 169 (650)
Q Consensus 111 ~t~~W~~-l~~~~--~~P~~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt 169 (650)
.+.+-.. +.... .......-+.+.+..++ .+|+.... ..+.+.++|+.+++-.
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~------~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS------PAPAVGVVDLEGKAFK 173 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS------SSCEEEEEETTTTEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC------CCCeEEEEECCCCcEE
Confidence 9987533 32211 00011123344444444 56765321 1257899999887654
No 293
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=48.81 E-value=2.1e+02 Score=28.29 Aligned_cols=216 Identities=9% Similarity=0.020 Sum_probs=113.6
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCC----CcEEeeecCCCCCC
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLES----KEWMRPECRGAPPS 126 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t----~~W~~l~~~~~~P~ 126 (650)
+++.++|+.+.....+... ...-+++++. +++||+.--. .+.++++|+.. ...+.+- ......
T Consensus 10 ~~I~~i~~~~~~~~~~~~~-----~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~-~~~~~~ 78 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN-----LRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVI-SRDIQA 78 (316)
T ss_dssp SSEEEEETTSCCCEEEECS-----CSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEE-CSSCSC
T ss_pred CeEEEEECCCcceEehhcC-----CCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEE-eCCCCC
Confidence 4688999988877665322 2333455554 5789986532 35799999876 2222221 111111
Q ss_pred CCcccEEEEE-cCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeee--ecCEEEEEeccCCCC
Q 006334 127 PRESHTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNV--IANRLFVYGGDCGDQ 203 (650)
Q Consensus 127 ~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~--~~~~Iyv~GG~~~~~ 203 (650)
-..+++. .++.||+.-.. .+.++++|++...-..+. ...+..| ..+++ .++.||+..-..
T Consensus 79 ---p~glavd~~~~~ly~~d~~-------~~~I~~~~~~g~~~~~~~-~~~~~~P---~~iavdp~~g~ly~~d~~~--- 141 (316)
T 1ijq_A 79 ---PDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLF-RENGSKP---RAIVVDPVHGFMYWTDWGT--- 141 (316)
T ss_dssp ---CCEEEEETTTTEEEEEETT-------TTEEEEEETTSSSEEEEE-ECTTCCE---EEEEEETTTTEEEEEECSS---
T ss_pred ---cCEEEEeecCCeEEEEECC-------CCEEEEEeCCCCceEEEE-ECCCCCc---ceEEeCCCCCEEEEEccCC---
Confidence 1344444 35789986332 246888888754333221 1122222 22333 257888875311
Q ss_pred ccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcEEEeecCCCCCCCc
Q 006334 204 YHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDTCGQQPQGR 281 (650)
Q Consensus 204 ~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~~~~~p~~R 281 (650)
...+++++++...-..+... .. ..-..+++. +++||+.- .....|+++|+....-..+.... ....
T Consensus 142 -~~~I~~~~~dG~~~~~~~~~-~~---~~P~gla~d~~~~~lY~~D-----~~~~~I~~~d~dg~~~~~~~~~~--~~~~ 209 (316)
T 1ijq_A 142 -PAKIKKGGLNGVDIYSLVTE-NI---QWPNGITLDLLSGRLYWVD-----SKLHSISSIDVNGGNRKTILEDE--KRLA 209 (316)
T ss_dssp -SCEEEEEETTSCCEEEEECS-SC---SCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSCEEEEECT--TTTS
T ss_pred -CCeEEEEcCCCCCeEEEEEC-CC---CCceEEEEeccCCEEEEEE-----CCCCeEEEEecCCCceEEEeecC--CccC
Confidence 25799999876554444311 11 222334443 56899883 23468999999864433332211 1112
Q ss_pred ceeEEEEECCeEEEEcCCCCCCCCCCcEEEEec
Q 006334 282 FSHAAVVTGSDIVIYGGCGEDERPLNELLVLQL 314 (650)
Q Consensus 282 ~~hsav~~~~~lyV~GG~~~~~~~~~d~~~l~l 314 (650)
.-.++++.++.||+.--. ...+.+++.
T Consensus 210 ~P~giav~~~~ly~~d~~------~~~V~~~~~ 236 (316)
T 1ijq_A 210 HPFSLAVFEDKVFWTDII------NEAIFSANR 236 (316)
T ss_dssp SEEEEEEETTEEEEEETT------TTEEEEEET
T ss_pred CcEEEEEECCEEEEEECC------CCeEEEEeC
Confidence 234666678888887421 235666654
No 294
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=48.77 E-value=2.7e+02 Score=29.51 Aligned_cols=19 Identities=16% Similarity=0.305 Sum_probs=15.4
Q ss_pred cccEEEEEcCCEEEEEccc
Q 006334 129 ESHTATLVGDDKMVIFGGS 147 (650)
Q Consensus 129 ~~hs~~~~~~~~Lyv~GG~ 147 (650)
..|++++..++.+|.+|-.
T Consensus 213 ~~hs~alt~~G~v~~wG~n 231 (473)
T 3of7_A 213 KDHILFLDEEGMVFAWGNG 231 (473)
T ss_dssp SSEEEEEETTSCEEEEECC
T ss_pred CCeEEEEeCCCeEEEEeCC
Confidence 4688888888999999854
No 295
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=48.62 E-value=2.7e+02 Score=29.49 Aligned_cols=20 Identities=35% Similarity=0.524 Sum_probs=15.9
Q ss_pred CcccEEEEEcCCEEEEEccc
Q 006334 128 RESHTATLVGDDKMVIFGGS 147 (650)
Q Consensus 128 R~~hs~~~~~~~~Lyv~GG~ 147 (650)
-..|++++..++.||.+|-.
T Consensus 265 G~~hs~alt~~G~v~~wG~n 284 (473)
T 3of7_A 265 GENHCFALTKDNKLVSWGLN 284 (473)
T ss_dssp CSSEEEEEETTSCEEEEEEC
T ss_pred CCCeEEEEecCCCEEEeCCC
Confidence 35788888888999999853
No 296
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=48.59 E-value=2.7e+02 Score=31.07 Aligned_cols=200 Identities=10% Similarity=0.028 Sum_probs=0.0
Q ss_pred CCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccE--EEEEcCCEEEEEccccCCCCc
Q 006334 76 GPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHT--ATLVGDDKMVIFGGSGEGEAN 153 (650)
Q Consensus 76 ~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs--~~~~~~~~Lyv~GG~~~~~~~ 153 (650)
.+........-++++++.+ -..++.||+.+++-..+ ............. .....|++.++++..+ ..
T Consensus 16 ~~~~~~~~w~~dg~~~~~~-------~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~---~~ 84 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ-------ENNILVFNAEYGNSSVF-LENSTFDEFGHSINDYSISPDGQFILLEYNY---VK 84 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE-------TTEEEEEETTTCCEEEE-ECTTTTTTCCSCCCEEEECTTSSEEEEEEEE---EE
T ss_pred cccccccEECCCCcEEEEc-------CCcEEEEECCCCceEEE-EechhhhhhcccccceEECCCCCEEEEEECC---ee
Q ss_pred cc-----ceEEEEecCCCceeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCC
Q 006334 154 YL-----NDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSP 228 (650)
Q Consensus 154 ~~-----~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P 228 (650)
.. .++|+||+.+++...+. ..+......+..-.+..|..... ++++++|..+..-..+...+...
T Consensus 85 ~~r~~~~~~~~~~d~~~~~~~~l~---~~~~~~~~~~~SPdG~~la~~~~-------~~i~~~~~~~~~~~~lt~~g~~~ 154 (740)
T 4a5s_A 85 QWRHSYTASYDIYDLNKRQLITEE---RIPNNTQWVTWSPVGHKLAYVWN-------NDIYVKIEPNLPSYRITWTGKED 154 (740)
T ss_dssp CSSSCEEEEEEEEETTTTEECCSS---CCCTTEEEEEECSSTTCEEEEET-------TEEEEESSTTSCCEECCSCCBTT
T ss_pred eEEEccceEEEEEECCCCcEEEcc---cCCCcceeeEECCCCCEEEEEEC-------CeEEEEECCCCceEEEcCCCCcc
Q ss_pred ---------------CcccceEEEEECCEEEEEeccCCC-------------------------------cccCeEEEEE
Q 006334 229 ---------------GVRAGHAAINIGTKVYIIGGVGDK-------------------------------HYYNDIWILN 262 (650)
Q Consensus 229 ---------------~~R~~~s~v~~~~~IyI~GG~~~~-------------------------------~~~~dv~~yD 262 (650)
..+.......-+++.+++.-.+.. .....++++|
T Consensus 155 ~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d 234 (740)
T 4a5s_A 155 IIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVN 234 (740)
T ss_dssp TEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEE
T ss_pred ceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEE
Q ss_pred CCC---C---cEEEeecCCCCCCCcceeEEEEE--CCeEEEE
Q 006334 263 VST---C---SWSQLDTCGQQPQGRFSHAAVVT--GSDIVIY 296 (650)
Q Consensus 263 ~~t---~---~W~~l~~~~~~p~~R~~hsav~~--~~~lyV~ 296 (650)
+++ + ++..+...............+.+ +++++++
T Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~ 276 (740)
T 4a5s_A 235 TDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQ 276 (740)
T ss_dssp TTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEE
T ss_pred CCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEE
No 297
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=48.41 E-value=1.8e+02 Score=27.48 Aligned_cols=192 Identities=7% Similarity=-0.024 Sum_probs=103.9
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCCc
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESKE 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~~ 114 (650)
++.||+.-.. .+.+++||+....-..+...+ ...-+.+++. ++.||+.-.. .+.++++|+....
T Consensus 47 ~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~----~~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~ 112 (267)
T 1npe_A 47 DKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQD----LGSPEGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQ 112 (267)
T ss_dssp TTEEEEEETT-----TTEEEEEESSSCCCEEEECTT----CCCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCS
T ss_pred CCEEEEEECC-----CCEEEEEecCCCCcEEEEECC----CCCccEEEEEecCCeEEEEECC-----CCEEEEEEcCCCC
Confidence 4688886532 357999998766433332211 1123455554 5789986532 3578999987654
Q ss_pred EEeeecCCCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cC
Q 006334 115 WMRPECRGAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--AN 191 (650)
Q Consensus 115 W~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~ 191 (650)
-+.+... .. ..-..+++.. ++.||+..... ..+.+++++++...-..+. ...+ ..-..++.. ++
T Consensus 113 ~~~~~~~-~~---~~P~~i~vd~~~g~lyv~~~~~-----~~~~I~~~~~dg~~~~~~~-~~~~---~~P~gia~d~~~~ 179 (267)
T 1npe_A 113 RRVLFDT-GL---VNPRGIVTDPVRGNLYWTDWNR-----DNPKIETSHMDGTNRRILA-QDNL---GLPNGLTFDAFSS 179 (267)
T ss_dssp CEEEECS-SC---SSEEEEEEETTTTEEEEEECCS-----SSCEEEEEETTSCCCEEEE-CTTC---SCEEEEEEETTTT
T ss_pred EEEEEEC-CC---CCccEEEEeeCCCEEEEEECCC-----CCcEEEEEecCCCCcEEEE-ECCC---CCCcEEEEcCCCC
Confidence 3333111 11 1123444444 57899864321 1246888887643322221 0111 111223332 46
Q ss_pred EEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEECCEEEEEeccCCCcccCeEEEEECCCCcEEE
Q 006334 192 RLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 192 ~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~ 270 (650)
.||+.--. .+.+++||+....-..+.. ....| ..++..++.+|+.-. ..+.++++|+.+.+-..
T Consensus 180 ~lyv~d~~-----~~~I~~~~~~g~~~~~~~~--~~~~P---~gi~~d~~~lyva~~-----~~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 180 QLCWVDAG-----THRAECLNPAQPGRRKVLE--GLQYP---FAVTSYGKNLYYTDW-----KTNSVIAMDLAISKEMD 243 (267)
T ss_dssp EEEEEETT-----TTEEEEEETTEEEEEEEEE--CCCSE---EEEEEETTEEEEEET-----TTTEEEEEETTTTEEEE
T ss_pred EEEEEECC-----CCEEEEEecCCCceEEEec--CCCCc---eEEEEeCCEEEEEEC-----CCCeEEEEeCCCCCceE
Confidence 88887532 3689999987654333321 11112 345566789999732 23579999998776543
No 298
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=45.90 E-value=1.4e+02 Score=30.54 Aligned_cols=71 Identities=7% Similarity=0.026 Sum_probs=42.7
Q ss_pred CCEEEEEcccCC----CcCcCeEEEEECCCCcEE-eeecCCCCCCCCcccEEEEEcCCE-EEEEccccCCCCcccceEEE
Q 006334 87 GHKMIVFGGTNG----YKKVNDLHILDLESKEWM-RPECRGAPPSPRESHTATLVGDDK-MVIFGGSGEGEANYLNDLHV 160 (650)
Q Consensus 87 ~~~lyVfGG~~~----~~~~ndv~~yD~~t~~W~-~l~~~~~~P~~R~~hs~~~~~~~~-Lyv~GG~~~~~~~~~~dv~~ 160 (650)
++++||...... ....++++++|..+.+-. .+ +.+...+.+.+..+++ +++..... .+++.+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i------~~g~~p~~i~~s~Dg~~~l~v~~~~------~~~V~V 345 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI------SLGHDVDAISVAQDGGPDLYALSAG------TEVLHI 345 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE------ECCCCcCeEEECCCCCeEEEEEcCC------CCeEEE
Confidence 578999754211 123578999999887653 33 2223345556555665 44444331 257999
Q ss_pred EecCCCcee
Q 006334 161 LDLKTMRWA 169 (650)
Q Consensus 161 yd~~t~~Wt 169 (650)
||..+.+-.
T Consensus 346 iD~~t~~vv 354 (373)
T 2mad_H 346 YDAGAGDQD 354 (373)
T ss_pred EECCCCCEE
Confidence 998876544
No 299
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=44.88 E-value=2.4e+02 Score=27.75 Aligned_cols=65 Identities=15% Similarity=0.115 Sum_probs=34.5
Q ss_pred EcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee-cCEEEEEeccCCCCccCeEEEEECC
Q 006334 136 VGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI-ANRLFVYGGDCGDQYHGDIDMLDMN 214 (650)
Q Consensus 136 ~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~-~~~Iyv~GG~~~~~~~n~v~~yd~~ 214 (650)
..++.+++.|+.+ ..+.+||+.+.+....- . .. ...-.++... ++..++.||.+ ..+..||+.
T Consensus 85 ~~~~~~l~s~s~D-------~~v~lwd~~~~~~~~~~-~-~h--~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~ 148 (343)
T 2xzm_R 85 SQENCFAISSSWD-------KTLRLWDLRTGTTYKRF-V-GH--QSEVYSVAFSPDNRQILSAGAE-----REIKLWNIL 148 (343)
T ss_dssp CSSTTEEEEEETT-------SEEEEEETTSSCEEEEE-E-CC--CSCEEEEEECSSTTEEEEEETT-----SCEEEEESS
T ss_pred CCCCCEEEEEcCC-------CcEEEEECCCCcEEEEE-c-CC--CCcEEEEEECCCCCEEEEEcCC-----CEEEEEecc
Confidence 3456677777763 35888898776543211 0 00 1111122222 45666677755 467788876
Q ss_pred CC
Q 006334 215 SL 216 (650)
Q Consensus 215 t~ 216 (650)
..
T Consensus 149 ~~ 150 (343)
T 2xzm_R 149 GE 150 (343)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 300
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=43.44 E-value=2.1e+02 Score=32.51 Aligned_cols=150 Identities=11% Similarity=0.100 Sum_probs=80.4
Q ss_pred ceEEEEECCC--CcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCC-----CcCcCeEEEEECCC--------CcEEe
Q 006334 53 GDVLMLNLDT--MVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNG-----YKKVNDLHILDLES--------KEWMR 117 (650)
Q Consensus 53 ~dv~~yD~~t--~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~-----~~~~ndv~~yD~~t--------~~W~~ 117 (650)
+++|..|... ..|..+.. |+....+...++++|+....+- .-....++.+|+.+ ..|+.
T Consensus 269 ~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 342 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKINM------PSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKI 342 (711)
T ss_dssp EEEEEEECSSSSCEEEECCS------CTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEE
T ss_pred eeEEEEcCCCCCCcceEeec------CCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceE
Confidence 6777777653 56776622 2322224566899999765431 11346788998765 46887
Q ss_pred eecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeee--e-cCEE-
Q 006334 118 PECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNV--I-ANRL- 193 (650)
Q Consensus 118 l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~--~-~~~I- 193 (650)
+- .|.....-..+...++.||+..-. .....++++|+.++.|..... -.+|.. ....... . ++.+
T Consensus 343 ~~----~~~~~~~l~~~~~~~~~l~~~~~~-----~~~~~l~~~~~~~g~~~~~~~-i~lp~~-~~~~~~~~~~~~~~~~ 411 (711)
T 4hvt_A 343 LF----TPTANEVFNFISTTKDRVFLATYD-----NVVAKVVTFTLENEQWTKPVV-LKLPYQ-NAIFGMSSYEEEEEAL 411 (711)
T ss_dssp EE----CCCTTEEEEEEEECSSCEEEEEEE-----TTEEEEEEECEETTEECCCEE-ECCCST-TCEEEEECCTTCSCEE
T ss_pred EE----CCCCCCeEEEEEEECCEEEEEEEE-----CCEEEEEEEECCCCceEEEec-cCCCCC-eEEEEEeecCcCCEEE
Confidence 41 122222333333445677665332 124568899988888853210 123321 1111111 1 2333
Q ss_pred EEEeccCCCCccCeEEEEECCCCcEEEeee
Q 006334 194 FVYGGDCGDQYHGDIDMLDMNSLTWSRLAI 223 (650)
Q Consensus 194 yv~GG~~~~~~~n~v~~yd~~t~~W~~i~~ 223 (650)
|.+.+. ..-..++.||+. .+++.+..
T Consensus 412 ~~~ss~---~~P~~~~~~d~~-~~~~~l~~ 437 (711)
T 4hvt_A 412 ITIENS---IVPPTIYLWVKT-HELKIIRK 437 (711)
T ss_dssp EEEECS---SSCCEEEEECTT-SCEEEEEC
T ss_pred EEEecC---CCCCEEEEEeCC-CcEEEEec
Confidence 333332 234689999988 77877763
No 301
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=41.51 E-value=2.6e+02 Score=27.22 Aligned_cols=183 Identities=11% Similarity=0.057 Sum_probs=88.5
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE-CCEEEEEcccCCCcCcCeEEEEECCCCc-
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW-GHKMIVFGGTNGYKKVNDLHILDLESKE- 114 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~-~~~lyVfGG~~~~~~~ndv~~yD~~t~~- 114 (650)
++.||+...... ...+++||..+.+...+... +..+.....+.. ++.+|+.-- ....+|++|+.+..
T Consensus 82 dG~l~vad~~~~---~~~v~~~d~~~g~~~~~~~~---~~~~~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 82 NGDLVATGWNAD---SIPVVSLVKSDGTVETLLTL---PDAIFLNGITPLSDTQYLTADS-----YRGAIWLIDVVQPSG 150 (306)
T ss_dssp TSCEEEEEECTT---SCEEEEEECTTSCEEEEEEC---TTCSCEEEEEESSSSEEEEEET-----TTTEEEEEETTTTEE
T ss_pred CCcEEEEeccCC---cceEEEEcCCCCeEEEEEeC---CCccccCcccccCCCcEEEEEC-----CCCeEEEEeCCCCcE
Confidence 456777543211 12488899888887766544 333444444433 556777431 13579999987642
Q ss_pred --EEeeec-C-CCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCC-CceeeccccCCCCCCCCcceeeee
Q 006334 115 --WMRPEC-R-GAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKT-MRWASPAVKGDIPVPRDSHSSNVI 189 (650)
Q Consensus 115 --W~~l~~-~-~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t-~~Wt~i~~~~~lP~~R~~hs~v~~ 189 (650)
|..-.. . ................++.||+.--. .+.+++||++. .+........... .-...++.-
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~-------~~~I~~~~~~~~g~~~~~~~~~~~~--~P~gi~vd~ 221 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTE-------KMLLLRIPVDSTDKPGEPEIFVEQT--NIDDFAFDV 221 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETT-------TTEEEEEEBCTTSCBCCCEEEEESC--CCSSEEEBT
T ss_pred eEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCC-------CCEEEEEEeCCCCCCCccEEEeccC--CCCCeEECC
Confidence 211100 0 01111111111222323578875321 35799999875 3322111101111 111222223
Q ss_pred cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEEC------CEEEEEec
Q 006334 190 ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINIG------TKVYIIGG 248 (650)
Q Consensus 190 ~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~~------~~IyI~GG 248 (650)
++.+|+.-.. .+.+.+||+. .+...+.. .+.+.....++.++ +.|||.-.
T Consensus 222 dG~l~va~~~-----~~~V~~~~~~-G~~~~~~~---~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 222 EGNLYGATHI-----YNSVVRIAPD-RSTTIIAQ---AEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp TCCEEEECBT-----TCCEEEECTT-CCEEEEEC---GGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCCEEEEeCC-----CCeEEEECCC-CCEEEEee---cccccCCceEEEEecccCCCCEEEEECC
Confidence 5678887432 2579999986 44444431 11222233444442 57888854
No 302
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=40.87 E-value=4.7e+02 Score=30.03 Aligned_cols=204 Identities=10% Similarity=0.045 Sum_probs=106.8
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCCcceEEEEE--CCEEEEEcccCCCcCcCeEEEEECCCC----cEEeeecCCCCCC
Q 006334 53 GDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILW--GHKMIVFGGTNGYKKVNDLHILDLESK----EWMRPECRGAPPS 126 (650)
Q Consensus 53 ~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~----~W~~l~~~~~~P~ 126 (650)
.++.++++....+..+... .+.-.++++. +++||+.-.. .+.|+++++... ..+.+-. .....
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~-----~~~~~gl~~d~~~~~lY~sD~~-----~~~I~~~~l~g~~~~~~~~~vi~-~~l~~ 472 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPN-----LRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVIS-RDIQA 472 (791)
T ss_dssp SSEEEECTTSCCCEEEECS-----CSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEEC-SSCSC
T ss_pred cceeEeeccCCcceeeecC-----CCceEEEeecccCCeeEEeecc-----ceeEEEEeccCCCCCcceeEEEe-cCCCC
Confidence 3566677776666655432 2223344443 5788886432 356888887652 2333211 11111
Q ss_pred CCcccEEEEE-cCCEEEEEccccCCCCcccceEEEEecCCCceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCC
Q 006334 127 PRESHTATLV-GDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQ 203 (650)
Q Consensus 127 ~R~~hs~~~~-~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~ 203 (650)
-.++++. ..+.||+.-.. .+.|++++++......+. ...+..|+ .+++. ++.||+.--.
T Consensus 473 ---P~GLAvD~~~~~LY~tD~~-------~~~I~v~~ldG~~~~~l~-~~~l~~P~---gIaVDp~~g~LYwtD~g---- 534 (791)
T 3m0c_C 473 ---PDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLF-RENGSKPR---AIVVDPVHGFMYWTDWG---- 534 (791)
T ss_dssp ---CCEEEEETTTTEEEEEETT-------TTEEEEEETTSSSEEEEE-ECTTCCEE---EEEEETTTTEEEEEECS----
T ss_pred ---cceeeeeecCCcEEEEecC-------CCeEEEEeCCCCeEEEEE-eCCCCCcc---eEEEecCCCCEEEecCC----
Confidence 1233433 24689986332 346899998765544332 12222221 23332 4789987421
Q ss_pred ccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE--CCEEEEEeccCCCcccCeEEEEECCCCcEEE-eecCCCCCCC
Q 006334 204 YHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI--GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQ-LDTCGQQPQG 280 (650)
Q Consensus 204 ~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~--~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~-l~~~~~~p~~ 280 (650)
....+++++++...-..+... .+ ..-.++++. +++||+.= .....|+++|+....-.. +.....++
T Consensus 535 ~~~~I~~~~~dG~~~~~lv~~-~l---~~P~GLavD~~~~~LYwaD-----~~~~~I~~~d~dG~~~~~v~~~~~~l~-- 603 (791)
T 3m0c_C 535 TPAKIKKGGLNGVDIYSLVTE-NI---QWPNGITLDLLSGRLYWVD-----SKLHSISSIDVNGGNRKTILEDEKRLA-- 603 (791)
T ss_dssp SSCEEEEEETTSCCEEEEECS-SC---SCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSCEEEEECTTTTS--
T ss_pred CCCeEEEEecCCCceEEEEeC-CC---CCceEEEEecCCCeEEEEe-----CCCCcEEEEecCCCceEEEecCCCccC--
Confidence 125799999887655554321 11 111223333 57999982 234679999997654333 33211222
Q ss_pred cceeEEEEECCeEEEEc
Q 006334 281 RFSHAAVVTGSDIVIYG 297 (650)
Q Consensus 281 R~~hsav~~~~~lyV~G 297 (650)
...++++.++.||+.-
T Consensus 604 -~P~glav~~~~lYwtD 619 (791)
T 3m0c_C 604 -HPFSLAVFEDKVFWTD 619 (791)
T ss_dssp -SEEEEEEETTEEEEEE
T ss_pred -CCCEEEEeCCEEEEEE
Confidence 3346667788999884
No 303
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=39.99 E-value=4.5e+02 Score=29.60 Aligned_cols=260 Identities=14% Similarity=0.162 Sum_probs=128.1
Q ss_pred cCCCeEEeeecCCCCCCCcceeEEEEE---CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCC----cce-
Q 006334 10 KRAAMWLYPKVLGFNPPERWGHSACYS---HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPR----DSH- 81 (650)
Q Consensus 10 ~~~~~W~~~~~~g~~P~~R~ghs~v~~---~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR----~~h- 81 (650)
.....|..+...+ ...|.. ++++. .+.||+.. .. ..+|+.+....+|+.+... +... ...
T Consensus 8 ~~~~~w~~~~~~~--~~g~i~-~i~~~p~~~~~~~~~~-~~-----ggv~rS~D~G~tW~~i~~~---~~~~~~~~~~i~ 75 (737)
T 2cn3_A 8 SVPYKWDNVVIGG--GGGFMP-GIVFNETEKDLIYARA-AI-----GGAYRWDPSTETWIPLLDH---FQMDEYSYYGVE 75 (737)
T ss_dssp ECCEEEEEECCCS--BCSCCC-EEEECSSSTTCEEEEC-SS-----SCEEEEETTTTEEEECCTT---CCGGGGGGGCEE
T ss_pred cCCCeeEEcccCC--Ccceee-EEEECCCCCCEEEEEe-cC-----CcEEEeCCCCCCEEECcCc---cCcccccCCCcc
Confidence 3456788654322 111322 33332 25777733 11 3599999999999997542 1111 122
Q ss_pred EEEEE---CCEEEEEcccCC--CcC-cCeEEEEECCCCcEEeeecCCC----CCCCCcccEEEEEc--CCEEEEEccccC
Q 006334 82 SAILW---GHKMIVFGGTNG--YKK-VNDLHILDLESKEWMRPECRGA----PPSPRESHTATLVG--DDKMVIFGGSGE 149 (650)
Q Consensus 82 sa~~~---~~~lyVfGG~~~--~~~-~ndv~~yD~~t~~W~~l~~~~~----~P~~R~~hs~~~~~--~~~Lyv~GG~~~ 149 (650)
++++. .+.||+..|... ... ...+++=.=.-.+|+++..... .|.....+.+++.. .+.||+- .. .
T Consensus 76 ~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g-~~-~ 153 (737)
T 2cn3_A 76 SIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLG-TR-C 153 (737)
T ss_dssp EEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEE-CS-T
T ss_pred eEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEe-ec-c
Confidence 33332 257888765311 111 1334443334568998743211 11111224455432 2456653 21 0
Q ss_pred CCCcccceEEEEecCCCceeeccccCCCCCCC-----------C---cceeeeec----------CEEEEEeccCCCCcc
Q 006334 150 GEANYLNDLHVLDLKTMRWASPAVKGDIPVPR-----------D---SHSSNVIA----------NRLFVYGGDCGDQYH 205 (650)
Q Consensus 150 ~~~~~~~dv~~yd~~t~~Wt~i~~~~~lP~~R-----------~---~hs~v~~~----------~~Iyv~GG~~~~~~~ 205 (650)
. ..+|+=+=.-.+|+.+. .+|..- . +...+.++ +.||+.-....
T Consensus 154 g-----~gl~~S~DgG~tW~~~~---~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~---- 221 (737)
T 2cn3_A 154 G-----NGLWRSTDYGVTWSKVE---SFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKN---- 221 (737)
T ss_dssp T-----CCEEEESSTTSSCEECT---TCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSS----
T ss_pred C-----CcEEEeCCCCcceeccc---CCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCC----
Confidence 0 12443322345899876 233210 0 11112221 25666432111
Q ss_pred CeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CCEEEEEeccCCC----cccCeEEEEECCCCcEEEeecCCCC-CC
Q 006334 206 GDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GTKVYIIGGVGDK----HYYNDIWILNVSTCSWSQLDTCGQQ-PQ 279 (650)
Q Consensus 206 n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~~IyI~GG~~~~----~~~~dv~~yD~~t~~W~~l~~~~~~-p~ 279 (650)
..+++=.-.-.+|+.+. .+|.....+.++.. ++.+|+..+.... .....+|+++....+|+.+...... ..
T Consensus 222 ~~v~~S~DgG~tW~~~~---~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~ 298 (737)
T 2cn3_A 222 ESIYRSTDGGVTWKAVP---GQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSD 298 (737)
T ss_dssp CCEEEESSTTSCCEECT---TCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTT
T ss_pred ccEEEEcCCCCceEECC---CCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcc
Confidence 23544433456799987 44444343444433 6788887653221 1345799999999999998753211 12
Q ss_pred CcceeEEEEEC----CeEEEEcC
Q 006334 280 GRFSHAAVVTG----SDIVIYGG 298 (650)
Q Consensus 280 ~R~~hsav~~~----~~lyV~GG 298 (650)
.+++.+.+.++ +.||+.+.
T Consensus 299 ~~~~~~~i~v~p~~~~~ly~~~~ 321 (737)
T 2cn3_A 299 NRFCFAGLAVDRQNPDIIMVTSM 321 (737)
T ss_dssp CCSEEEEEEECTTCTTCEEEEEE
T ss_pred cccccccEEEcCCCCCEEEEEec
Confidence 35555545442 45777754
No 304
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=35.01 E-value=3.9e+02 Score=27.45 Aligned_cols=19 Identities=21% Similarity=0.414 Sum_probs=15.6
Q ss_pred cccEEEEEcCCEEEEEccc
Q 006334 129 ESHTATLVGDDKMVIFGGS 147 (650)
Q Consensus 129 ~~hs~~~~~~~~Lyv~GG~ 147 (650)
..|++++..++.||.+|-.
T Consensus 173 ~~hs~alt~~G~v~~wG~n 191 (413)
T 1a12_A 173 NDHLVMLTADGDLYTLGCG 191 (413)
T ss_dssp SSEEEEEETTSCEEEEECC
T ss_pred CceEEEEcCCCCEEEeeCC
Confidence 4688888888999999854
No 305
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=34.79 E-value=4.6e+02 Score=28.14 Aligned_cols=171 Identities=11% Similarity=0.016 Sum_probs=80.8
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCC----cEEEee-------cCCCCCCCCcceEEEEECCEEEEEc-ccCCCcCcCe
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTM----VWSTLA-------TTGQGPGPRDSHSAILWGHKMIVFG-GTNGYKKVND 104 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~----sW~~l~-------~~g~~P~pR~~hsa~~~~~~lyVfG-G~~~~~~~nd 104 (650)
+.++|+-|.. ++.++++|..++ +-.+.. ..+. .+-++..+.-++ |||-. |......-..
T Consensus 95 r~~l~v~~l~-----s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~---s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~ 165 (462)
T 2ece_A 95 RRFLIVPGLR-----SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGY---SRLHTVHCGPDA-IYISALGNEEGEGPGG 165 (462)
T ss_dssp SCEEEEEBTT-----TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCE---EEEEEEEECSSC-EEEEEEEETTSCSCCE
T ss_pred CCEEEEccCC-----CCeEEEEECCCCCCCceeeeeechhhcccccCC---CcccceeECCCe-EEEEcCCCcCCCCCCe
Confidence 4677776663 468999998766 333322 1111 122333344456 77732 2212233578
Q ss_pred EEEEECCCCcEEe-eecCCCCCCCCcccEEEEEcCCEEEEEc----------cccCCC--CcccceEEEEecCCCceeec
Q 006334 105 LHILDLESKEWMR-PECRGAPPSPRESHTATLVGDDKMVIFG----------GSGEGE--ANYLNDLHVLDLKTMRWASP 171 (650)
Q Consensus 105 v~~yD~~t~~W~~-l~~~~~~P~~R~~hs~~~~~~~~Lyv~G----------G~~~~~--~~~~~dv~~yd~~t~~Wt~i 171 (650)
+.++|.++.+-.. ++. +..+....+ ......+.++++.- |..... ..+.+.+.+||+.+.+-..
T Consensus 166 v~vlD~~T~~v~~~~~~-~~~~~~~~Y-d~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~- 242 (462)
T 2ece_A 166 ILMLDHYSFEPLGKWEI-DRGDQYLAY-DFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH- 242 (462)
T ss_dssp EEEECTTTCCEEEECCS-BCTTCCCCC-CEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE-
T ss_pred EEEEECCCCeEEEEEcc-CCCCccccc-eEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee-
Confidence 9999999875332 111 112211111 12223334444443 221000 0346789999998763322
Q ss_pred cccCCCCCCCC----cceeeee---cCEEEEEeccCCCCccCeEEEEECCCCcEEEeee
Q 006334 172 AVKGDIPVPRD----SHSSNVI---ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAI 223 (650)
Q Consensus 172 ~~~~~lP~~R~----~hs~v~~---~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~ 223 (650)
.++.+.. .|....+ +..+|+..-.+-....+.+++|..+...|..+..
T Consensus 243 ----tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~v 297 (462)
T 2ece_A 243 ----SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKV 297 (462)
T ss_dssp ----EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEE
T ss_pred ----EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEE
Confidence 1111111 0111111 3456665442222233566665555688887764
No 306
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=33.43 E-value=4.2e+02 Score=27.27 Aligned_cols=60 Identities=22% Similarity=0.274 Sum_probs=32.7
Q ss_pred ceEEEEE-CCEEEEEcc-cCCCcC------cCeEEEEE-CCCCcEEeeecCCCCCCCCcccEEEEEcCCEEEEEcc
Q 006334 80 SHSAILW-GHKMIVFGG-TNGYKK------VNDLHILD-LESKEWMRPECRGAPPSPRESHTATLVGDDKMVIFGG 146 (650)
Q Consensus 80 ~hsa~~~-~~~lyVfGG-~~~~~~------~ndv~~yD-~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG 146 (650)
.|++++. ++.||.+|- .+.... .+...-.. +....+..+. +-..|++++..++.+|.+|-
T Consensus 137 ~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va-------~G~~hs~alt~~G~v~~wG~ 205 (423)
T 3mvd_K 137 SHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIA-------SGADHLVILTTAGKVFTVGC 205 (423)
T ss_dssp SEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEE-------ECSSEEEEEETTSCEEEEEC
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEe-------cCCCeEEEEecCCeEEEeeC
Confidence 4666665 689999994 121111 11111111 1222344432 23478888888899999984
No 307
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=32.57 E-value=4.5e+02 Score=27.35 Aligned_cols=148 Identities=11% Similarity=0.059 Sum_probs=74.6
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCC-EEEEEccccCCCCcccceEEEEecCC
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDD-KMVIFGGSGEGEANYLNDLHVLDLKT 165 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~-~Lyv~GG~~~~~~~~~~dv~~yd~~t 165 (650)
++.||+.--. +.+.+||+.++..+.+.. ...+ -..+++..++ .||+..... ......++.++..
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~----~~~~-P~~ia~d~~G~~lyvad~~~---~~~~~~v~~~~~~- 213 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS----GLSK-VRTICWTHEADSMIITNDQN---NNDRPNNYILTRE- 213 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC----CCSC-EEEEEECTTSSEEEEEECCS---CTTSEEEEEEEGG-
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec----CCCC-cceEEEeCCCCEEEEEeCCC---CcccceEEEEeCC-
Confidence 3678876321 689999999988777622 1111 1223333344 488875432 1112235556643
Q ss_pred CceeeccccCCCCCCCCcceeeee--cCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCCCCCcccceEEEEE-CC-
Q 006334 166 MRWASPAVKGDIPVPRDSHSSNVI--ANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGSSPGVRAGHAAINI-GT- 241 (650)
Q Consensus 166 ~~Wt~i~~~~~lP~~R~~hs~v~~--~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~~-~~- 241 (650)
..|........+ ..-+.+++. ++.||+.--. .+.+++||+.+.....+...+....+ ..++.. ++
T Consensus 214 g~~~~~~~l~~~---~~p~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P---~gia~~pdG~ 282 (430)
T 3tc9_A 214 SGFKVITELTKG---QNCNGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWE---FHIQFHPSGN 282 (430)
T ss_dssp GTSCSEEEEEEC---SSCCCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCC---EEEEECTTSS
T ss_pred CceeeeeeeccC---CCceEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcc---eeEEEcCCCC
Confidence 334311110111 122333433 5678876421 25799999987766444322221111 123332 33
Q ss_pred EEEEEeccCCCcccCeEEEEECCC
Q 006334 242 KVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 242 ~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
.||+.- .....|++|+...
T Consensus 283 ~lyv~d-----~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 283 YAYIVV-----VNQHYILRSDYDW 301 (430)
T ss_dssp EEEEEE-----TTTTEEEEEEEET
T ss_pred EEEEEE-----CCCCEEEEEeCCc
Confidence 588883 2345788877653
No 308
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=30.60 E-value=4.1e+02 Score=26.28 Aligned_cols=187 Identities=7% Similarity=-0.062 Sum_probs=85.0
Q ss_pred CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEe
Q 006334 38 GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMR 117 (650)
Q Consensus 38 ~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~ 117 (650)
+.+.+.||.+ +.+.++|..+++....-.. +. .-.++....+.+++.. .+.+++||+.+.. +.
T Consensus 71 ~~~~~~~~~d-----~~v~iWd~~~~~~~~~~~~---~~--~v~~v~~~~~~~~~~~-------~~~i~i~d~~~~~-~~ 132 (355)
T 3vu4_A 71 NYVAFVTGVK-----EVVHIWDDVKKQDVSRIKV---DA--PVKDLFLSREFIVVSY-------GDVISVFKFGNPW-KR 132 (355)
T ss_dssp SEEEEECSST-----TEEEEEETTTTEEEEEEEC---SS--CEEEEEECSSEEEEEE-------TTEEEEEESSTTC-CB
T ss_pred CEEEEEECCc-----cEEEEEECCCCcEEEEEEC---CC--ceEEEEEcCCEEEEEE-------cCEEEEEECCCCc-ee
Confidence 4555666643 2788899888765432222 11 1123333345555532 2468889987751 11
Q ss_pred eecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCc-eeeccc----------cCCCCCCCCccee
Q 006334 118 PECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMR-WASPAV----------KGDIPVPRDSHSS 186 (650)
Q Consensus 118 l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~-Wt~i~~----------~~~lP~~R~~hs~ 186 (650)
+. .... ....+.+..+.+.+..|..+ ..+.+||+.+.. +...+. ...+......-.+
T Consensus 133 ~~---~~~~---~~~~~~~s~~~la~~sg~~~------g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~ 200 (355)
T 3vu4_A 133 IT---DDIR---FGGVCEFSNGLLVYSNEFNL------GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKM 200 (355)
T ss_dssp SS---CCEE---EEEEEEEETTEEEEEESSCT------TCEEEEECCC------------------CCEEECCCSSCEEE
T ss_pred eE---Eecc---CCceEEEEccEEEEeCCCcC------cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEE
Confidence 10 0111 11122222344444424322 358888887643 110000 0001111111122
Q ss_pred eee--cCEEEEEeccCCCCccCe-EEEEECCCCcEEEeeecCCCCCcccceEEEE-ECCEEEEEeccCCCcccCeEEEEE
Q 006334 187 NVI--ANRLFVYGGDCGDQYHGD-IDMLDMNSLTWSRLAIIGSSPGVRAGHAAIN-IGTKVYIIGGVGDKHYYNDIWILN 262 (650)
Q Consensus 187 v~~--~~~Iyv~GG~~~~~~~n~-v~~yd~~t~~W~~i~~~g~~P~~R~~~s~v~-~~~~IyI~GG~~~~~~~~dv~~yD 262 (650)
+.+ ++.+++.|+.+ .. +..+|+.+.+-...-..+.- ...-.+++. .++++++.|+.+ ..+.+||
T Consensus 201 ~~~s~~g~~l~s~s~d-----~~~v~iwd~~~~~~~~~~~~g~h--~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~ 268 (355)
T 3vu4_A 201 VRLNRKSDMVATCSQD-----GTIIRVFKTEDGVLVREFRRGLD--RADVVDMKWSTDGSKLAVVSDK-----WTLHVFE 268 (355)
T ss_dssp EEECTTSSEEEEEETT-----CSEEEEEETTTCCEEEEEECTTC--CSCEEEEEECTTSCEEEEEETT-----CEEEEEE
T ss_pred EEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCC--CCcEEEEEECCCCCEEEEEECC-----CEEEEEE
Confidence 222 46777777765 35 88899887654322111101 111122222 245777777654 3688888
Q ss_pred CCCC
Q 006334 263 VSTC 266 (650)
Q Consensus 263 ~~t~ 266 (650)
+...
T Consensus 269 ~~~~ 272 (355)
T 3vu4_A 269 IFND 272 (355)
T ss_dssp SSCC
T ss_pred ccCC
Confidence 8654
No 309
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=30.59 E-value=4.6e+02 Score=26.90 Aligned_cols=19 Identities=21% Similarity=0.177 Sum_probs=15.3
Q ss_pred cccEEEEEcCCEEEEEccc
Q 006334 129 ESHTATLVGDDKMVIFGGS 147 (650)
Q Consensus 129 ~~hs~~~~~~~~Lyv~GG~ 147 (650)
..|++++..++.+|.+|-.
T Consensus 241 ~~hs~alt~~G~v~~wG~n 259 (413)
T 1a12_A 241 AYFTFAISHEGHVYGFGLS 259 (413)
T ss_dssp TTEEEEEETTCCEEEEECC
T ss_pred CCEEEEEeCCCCEEEEeCC
Confidence 4678888888999999854
No 310
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=30.57 E-value=6.8e+02 Score=28.85 Aligned_cols=195 Identities=8% Similarity=-0.017 Sum_probs=95.2
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWM 116 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~ 116 (650)
++.++..|+.+ ..+.+||..+...... . +....-.++.+..+++++.|+.+ +.+.++|+.+.+..
T Consensus 28 dg~~lAsgs~D-----g~I~lw~~~~~~~~~~--~---~~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 28 TQNLLAIATVT-----GEVHIYGQQQVEVVIK--L---EDRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKVL 92 (902)
T ss_dssp TTTEEEEEETT-----SEEEEECSTTCEEEEE--C---SSCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCcEEEEE--c---CCCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcEE
Confidence 45667777754 3677888766543222 1 11111223333335555555543 46888898877643
Q ss_pred eeecCCCCCCCCcccEEEEEcCCEEEEEccccCCCCcccceEEEEecCCCceeecccc------CCCCC-CCCcceeeee
Q 006334 117 RPECRGAPPSPRESHTATLVGDDKMVIFGGSGEGEANYLNDLHVLDLKTMRWASPAVK------GDIPV-PRDSHSSNVI 189 (650)
Q Consensus 117 ~l~~~~~~P~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~~yd~~t~~Wt~i~~~------~~lP~-~R~~hs~v~~ 189 (650)
..- ..+ ..-.++....++..++.|+.+ ..+.+||+.+..-...... ..+.. ...-.+++..
T Consensus 93 ~~~---~~~--~~V~~v~~sp~g~~l~sgs~d-------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 93 TTV---FVP--GKITSIDTDASLDWMLIGLQN-------GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp EEE---ECS--SCEEEEECCTTCSEEEEEETT-------SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred EEE---cCC--CCEEEEEECCCCCEEEEEcCC-------CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEc
Confidence 321 011 112223333456666777653 3478888877653211100 00000 0011122222
Q ss_pred c--CEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCC----CCC---------c-ccceEEEEE--CCEEEEEeccCC
Q 006334 190 A--NRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGS----SPG---------V-RAGHAAINI--GTKVYIIGGVGD 251 (650)
Q Consensus 190 ~--~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~----~P~---------~-R~~~s~v~~--~~~IyI~GG~~~ 251 (650)
. ..+++.|+.+ ..+ .||+.+.+-...-. .. .+. . .....++.+ ++++++.|+.++
T Consensus 161 p~~~~~l~~g~~d-----g~v-lWd~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg 233 (902)
T 2oaj_A 161 PRDIGTVLISYEY-----VTL-TYSLVENEIKQSFI-YELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN 233 (902)
T ss_dssp TTEEEEEEEECSS-----CEE-EEETTTTEEEEEEC-CCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC
T ss_pred cCCCCEEEEEeCC-----CcE-EEECCCCceEEEEe-cccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC
Confidence 2 3566666644 367 89988876443221 11 000 0 011222333 457777776543
Q ss_pred CcccCeEEEEECCCCcEEE
Q 006334 252 KHYYNDIWILNVSTCSWSQ 270 (650)
Q Consensus 252 ~~~~~dv~~yD~~t~~W~~ 270 (650)
.+.+||+.+.+-..
T Consensus 234 -----~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 234 -----SLVFWDANSGHMIM 247 (902)
T ss_dssp -----CEEEEETTTCCEEE
T ss_pred -----eEEEEECCCCcEEE
Confidence 58999998876544
No 311
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=30.40 E-value=4.5e+02 Score=26.76 Aligned_cols=19 Identities=26% Similarity=0.480 Sum_probs=15.2
Q ss_pred cccEEEEEcCCEEEEEccc
Q 006334 129 ESHTATLVGDDKMVIFGGS 147 (650)
Q Consensus 129 ~~hs~~~~~~~~Lyv~GG~ 147 (650)
..|++++..++.+|.+|-.
T Consensus 222 ~~~t~~l~~~G~v~~wG~n 240 (389)
T 3kci_A 222 DAQTLCLTDDDTVWSWGDG 240 (389)
T ss_dssp SCEEEEEETTTEEEEEECC
T ss_pred CcEEEEEccCCEEEEEeCC
Confidence 3678888888999999853
No 312
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=28.62 E-value=4.3e+02 Score=25.99 Aligned_cols=193 Identities=8% Similarity=-0.029 Sum_probs=0.0
Q ss_pred eEEEEEC-CEEEEEccCCCCcccceEEEEECCCCcEEEeecCCCCCCCCcc--eEEEEE--CCEEEEE-----cccCCCc
Q 006334 31 HSACYSH-GAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTGQGPGPRDS--HSAILW--GHKMIVF-----GGTNGYK 100 (650)
Q Consensus 31 hs~v~~~-~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g~~P~pR~~--hsa~~~--~~~lyVf-----GG~~~~~ 100 (650)
+.+++.. ++||+..-.........+++||+.+++....-..+........ ..+++. ++.+||. +.
T Consensus 70 ~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~----- 144 (343)
T 2qe8_A 70 LGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK----- 144 (343)
T ss_dssp EEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG-----
T ss_pred eEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC-----
Q ss_pred CcCeEEEEECCCCcEEeeecCCCCCCC-------------------------CcccEEEEEcCCEEEEEccccCCCCccc
Q 006334 101 KVNDLHILDLESKEWMRPECRGAPPSP-------------------------RESHTATLVGDDKMVIFGGSGEGEANYL 155 (650)
Q Consensus 101 ~~ndv~~yD~~t~~W~~l~~~~~~P~~-------------------------R~~hs~~~~~~~~Lyv~GG~~~~~~~~~ 155 (650)
+.+++||+.+.+-..+........+ .....+++..+++.+++.-.. .
T Consensus 145 --~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~------~ 216 (343)
T 2qe8_A 145 --AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH------S 216 (343)
T ss_dssp --CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS------C
T ss_pred --CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC------C
Q ss_pred ceEEEEecCCCc---------eeeccccCCCCCCCCcceeeeecCEEEEEeccCCCCccCeEEEEECCCCcEEEeeecCC
Q 006334 156 NDLHVLDLKTMR---------WASPAVKGDIPVPRDSHSSNVIANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAIIGS 226 (650)
Q Consensus 156 ~dv~~yd~~t~~---------Wt~i~~~~~lP~~R~~hs~v~~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~~g~ 226 (650)
..+|+++..... +..+...+..+ .....++.-++.||+..-.. +.+.+||+.+.++..+. .
T Consensus 217 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g--~pdgia~d~~G~l~va~~~~-----~~V~~~d~~~G~~~~~~---~ 286 (343)
T 2qe8_A 217 TSMYRIKSADLSNLQLTDAELGSKIERYSEKP--ICDGISIDKDHNIYVGDLAH-----SAIGVITSADRAYKLLV---T 286 (343)
T ss_dssp SEEEEEEHHHHTCTTCCHHHHHTTCEEEEECC--SCSCEEECTTCCEEEEEGGG-----TEEEEEETTTTEEEEEE---E
T ss_pred CeEEEEEHHHhcCCCCChhhhhcceEecccCC--CCceEEECCCCCEEEEccCC-----CeEEEEECCCCCEEEEE---E
Q ss_pred CCCcccceEEEE-ECCEEEEE
Q 006334 227 SPGVRAGHAAIN-IGTKVYII 246 (650)
Q Consensus 227 ~P~~R~~~s~v~-~~~~IyI~ 246 (650)
.+....-.+++. -++++||.
T Consensus 287 ~~~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 287 DEKLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp CGGGSCEEEEEECTTSCEEEE
T ss_pred CCceecCCeeEECCCCcEEEE
No 313
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=28.60 E-value=5e+02 Score=26.66 Aligned_cols=18 Identities=33% Similarity=0.709 Sum_probs=15.1
Q ss_pred cccEEEEEcCCEEEEEcc
Q 006334 129 ESHTATLVGDDKMVIFGG 146 (650)
Q Consensus 129 ~~hs~~~~~~~~Lyv~GG 146 (650)
..|++++..++.||.+|-
T Consensus 136 ~~hs~al~~~G~v~~wG~ 153 (423)
T 3mvd_K 136 DSHSACLLEDGRVFAWGS 153 (423)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred cCeEEEEeCCCeEEEEeC
Confidence 478888888899999994
No 314
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=27.85 E-value=97 Score=32.53 Aligned_cols=72 Identities=10% Similarity=0.035 Sum_probs=43.5
Q ss_pred CCEEEEEcccC--C--CcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEcCC--EEEEEccccCCCCcccceEEE
Q 006334 87 GHKMIVFGGTN--G--YKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVGDD--KMVIFGGSGEGEANYLNDLHV 160 (650)
Q Consensus 87 ~~~lyVfGG~~--~--~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~~~--~Lyv~GG~~~~~~~~~~dv~~ 160 (650)
++++||.-+.. + ...-+.++++|+++.+-..- .+.+..-.++.+..++ .||+.-+. .+++.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~-----i~vg~~~~~lavs~D~~~~ly~tn~~-------~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK-----FEMGHEIDSINVSQDEKPLLYALSTG-------DKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE-----EEEEEEECEEEECSSSSCEEEEEETT-------TTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE-----EECCCCcceEEECCCCCeEEEEEcCC-------CCeEEE
Confidence 58999963321 1 12247899999999876442 1222233455555555 46664432 257899
Q ss_pred EecCCCceee
Q 006334 161 LDLKTMRWAS 170 (650)
Q Consensus 161 yd~~t~~Wt~ 170 (650)
||..+.+-..
T Consensus 359 iD~~t~k~~~ 368 (386)
T 3sjl_D 359 HDAESGEELR 368 (386)
T ss_dssp EETTTCCEEE
T ss_pred EECCCCcEEE
Confidence 9998877543
No 315
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=27.29 E-value=7.5e+02 Score=28.29 Aligned_cols=153 Identities=12% Similarity=0.040 Sum_probs=84.6
Q ss_pred EEEEE--CCEEEEEcccCCCcCcCeEEEEECCCCcEEeeecCCCCCCCCcccEEEEEc-CCEEEEEccccCCCCcccceE
Q 006334 82 SAILW--GHKMIVFGGTNGYKKVNDLHILDLESKEWMRPECRGAPPSPRESHTATLVG-DDKMVIFGGSGEGEANYLNDL 158 (650)
Q Consensus 82 sa~~~--~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~hs~~~~~-~~~Lyv~GG~~~~~~~~~~dv 158 (650)
++++. +++||+.-. ..+.|+++++....-+.+-. ..+..|+ ++++.. ++.||+.--. . ...+
T Consensus 475 GLAvD~~~~~LY~tD~-----~~~~I~v~~ldG~~~~~l~~-~~l~~P~---gIaVDp~~g~LYwtD~g----~--~~~I 539 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFR-ENGSKPR---AIVVDPVHGFMYWTDWG----T--PAKI 539 (791)
T ss_dssp EEEEETTTTEEEEEET-----TTTEEEEEETTSSSEEEEEE-CTTCCEE---EEEEETTTTEEEEEECS----S--SCEE
T ss_pred eeeeeecCCcEEEEec-----CCCeEEEEeCCCCeEEEEEe-CCCCCcc---eEEEecCCCCEEEecCC----C--CCeE
Confidence 44443 678998642 24679999998766554421 1222222 344432 4788886311 1 2468
Q ss_pred EEEecCCCceeeccccCCCCCCCCcceeee--ecCEEEEEeccCCCCccCeEEEEECCCCcEEEeee-cCCCCCcccceE
Q 006334 159 HVLDLKTMRWASPAVKGDIPVPRDSHSSNV--IANRLFVYGGDCGDQYHGDIDMLDMNSLTWSRLAI-IGSSPGVRAGHA 235 (650)
Q Consensus 159 ~~yd~~t~~Wt~i~~~~~lP~~R~~hs~v~--~~~~Iyv~GG~~~~~~~n~v~~yd~~t~~W~~i~~-~g~~P~~R~~~s 235 (650)
++++++...-..+. ...+..| ..+++ .+++||+.-. ..+.|+++|++...-..+.. .+.++ ...+
T Consensus 540 ~~~~~dG~~~~~lv-~~~l~~P---~GLavD~~~~~LYwaD~-----~~~~I~~~d~dG~~~~~v~~~~~~l~---~P~g 607 (791)
T 3m0c_C 540 KKGGLNGVDIYSLV-TENIQWP---NGITLDLLSGRLYWVDS-----KLHSISSIDVNGGNRKTILEDEKRLA---HPFS 607 (791)
T ss_dssp EEEETTSCCEEEEE-CSSCSCE---EEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEEECTTTTS---SEEE
T ss_pred EEEecCCCceEEEE-eCCCCCc---eEEEEecCCCeEEEEeC-----CCCcEEEEecCCCceEEEecCCCccC---CCCE
Confidence 89888654433322 1122111 12332 2588999843 23689999987654433332 12222 3346
Q ss_pred EEEECCEEEEEeccCCCcccCeEEEEECCCC
Q 006334 236 AINIGTKVYIIGGVGDKHYYNDIWILNVSTC 266 (650)
Q Consensus 236 ~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t~ 266 (650)
+++.+++||+.- .....|+++|..+.
T Consensus 608 lav~~~~lYwtD-----~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 608 LAVFEDKVFWTD-----IINEAIFSANRLTG 633 (791)
T ss_dssp EEEETTEEEEEE-----TTTTEEEEEETTTC
T ss_pred EEEeCCEEEEEE-----CCCCEEEEEeCCCC
Confidence 677889999983 23467888886544
No 316
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=27.06 E-value=8.7e+02 Score=28.97 Aligned_cols=185 Identities=14% Similarity=0.173 Sum_probs=99.9
Q ss_pred cceEEEEECCEEEEEcccCCCcCcCeEEEEECCCCcEEeeec--CCCCCCCCcccEEEEEc--CCEEEEEccccCCCCcc
Q 006334 79 DSHSAILWGHKMIVFGGTNGYKKVNDLHILDLESKEWMRPEC--RGAPPSPRESHTATLVG--DDKMVIFGGSGEGEANY 154 (650)
Q Consensus 79 ~~hsa~~~~~~lyVfGG~~~~~~~ndv~~yD~~t~~W~~l~~--~~~~P~~R~~hs~~~~~--~~~Lyv~GG~~~~~~~~ 154 (650)
.++++....+.+ ++|.-....+.-.++.|+.....|..-.. .........+.+.++.. +...||+|--. ...
T Consensus 335 ~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~---~~~ 410 (1095)
T 3k6s_A 335 EGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPR---YQH 410 (1095)
T ss_dssp TTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETT---GGG
T ss_pred ccccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEccc---ccc
Confidence 456666665555 77876555566678888776554432211 11222333344544321 23345665321 233
Q ss_pred cceEEEEecCCCceeeccc-cCCCCCCCCcceeeeec------CEEEEEecc--CCCCccCeEEEEECCC--CcEEEeee
Q 006334 155 LNDLHVLDLKTMRWASPAV-KGDIPVPRDSHSSNVIA------NRLFVYGGD--CGDQYHGDIDMLDMNS--LTWSRLAI 223 (650)
Q Consensus 155 ~~dv~~yd~~t~~Wt~i~~-~~~lP~~R~~hs~v~~~------~~Iyv~GG~--~~~~~~n~v~~yd~~t--~~W~~i~~ 223 (650)
...+++|......|..... .+.-.....+.+++..+ ..++++|.- ........+|+|.... ..|.....
T Consensus 411 ~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~ 490 (1095)
T 3k6s_A 411 TGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAV 490 (1095)
T ss_dssp TCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSS
T ss_pred cceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEE
Confidence 5678999888778986442 23222345556666532 257777742 1123346788886543 45764332
Q ss_pred c-CCC--CCcccceEEEEECC-------EEEEEeccCCCcccCeEEEEECCCC-cE
Q 006334 224 I-GSS--PGVRAGHAAINIGT-------KVYIIGGVGDKHYYNDIWILNVSTC-SW 268 (650)
Q Consensus 224 ~-g~~--P~~R~~~s~v~~~~-------~IyI~GG~~~~~~~~dv~~yD~~t~-~W 268 (650)
. +.. +..|++.+++.++| .| ++|.-........+|+|.-..+ .|
T Consensus 491 l~g~~~~~~~~FG~sva~~gD~NgDG~~Dl-~VGAP~~~~~~G~vyi~~g~~~~g~ 545 (1095)
T 3k6s_A 491 LYGEQGHPWGRFGAALTVLGDVNGDKLTDV-VIGAPGEEENRGAVYLFHGVLGPSI 545 (1095)
T ss_dssp CCCCCSCSSCCBTSCEEEEECSSSSSCCEE-EEECTTTTTSCCBEEEEEBCSSSCB
T ss_pred eecccCCccccCccceEeecccCCCCCcCE-EEeCCcCCCCCCEEEEecCCCCCCc
Confidence 1 221 45788888887532 35 4443223334567999987765 55
No 317
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=24.56 E-value=6.7e+02 Score=26.82 Aligned_cols=175 Identities=14% Similarity=0.020 Sum_probs=79.9
Q ss_pred CCEEEEEcccCCCcCcCeEEEEECCCC----cEEeeecCCCC--C-CCCcccEEEEEcCCEEEEEccccCCCCcccceEE
Q 006334 87 GHKMIVFGGTNGYKKVNDLHILDLESK----EWMRPECRGAP--P-SPRESHTATLVGDDKMVIFGGSGEGEANYLNDLH 159 (650)
Q Consensus 87 ~~~lyVfGG~~~~~~~ndv~~yD~~t~----~W~~l~~~~~~--P-~~R~~hs~~~~~~~~Lyv~GG~~~~~~~~~~dv~ 159 (650)
+.+|||-|.. .+.++++|..++ +-.+.-..... . ....-|......++ |||---- +...+..+.+.
T Consensus 95 r~~l~v~~l~-----s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g-~~~g~~~g~v~ 167 (462)
T 2ece_A 95 RRFLIVPGLR-----SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALG-NEEGEGPGGIL 167 (462)
T ss_dssp SCEEEEEBTT-----TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEE-ETTSCSCCEEE
T ss_pred CCEEEEccCC-----CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCC-CcCCCCCCeEE
Confidence 4566665544 368999999876 32221000000 0 11123555555566 7763111 11233457899
Q ss_pred EEecCCCceee-ccccCCCCCCCCcceeeee--cCEEEEEe---------ccCCC----CccCeEEEEECCCCcEEEeee
Q 006334 160 VLDLKTMRWAS-PAVKGDIPVPRDSHSSNVI--ANRLFVYG---------GDCGD----QYHGDIDMLDMNSLTWSRLAI 223 (650)
Q Consensus 160 ~yd~~t~~Wt~-i~~~~~lP~~R~~hs~v~~--~~~Iyv~G---------G~~~~----~~~n~v~~yd~~t~~W~~i~~ 223 (650)
++|.++.+-.. ++ .+..+.. ..+-+.+. .+.||+-- |.... .+.+.+.+||+.+.+ .+..
T Consensus 168 vlD~~T~~v~~~~~-~~~~~~~-~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~t 243 (462)
T 2ece_A 168 MLDHYSFEPLGKWE-IDRGDQY-LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHS 243 (462)
T ss_dssp EECTTTCCEEEECC-SBCTTCC-CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEE
T ss_pred EEECCCCeEEEEEc-cCCCCcc-ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeE
Confidence 99988654221 11 1111111 11112111 34444432 22211 356899999998763 2322
Q ss_pred cCCCCCc--ccceEEEEE---CCEEEEEeccCCCcccCeEEEEECCCCcEEEeec
Q 006334 224 IGSSPGV--RAGHAAINI---GTKVYIIGGVGDKHYYNDIWILNVSTCSWSQLDT 273 (650)
Q Consensus 224 ~g~~P~~--R~~~s~v~~---~~~IyI~GG~~~~~~~~dv~~yD~~t~~W~~l~~ 273 (650)
. ..... ...+....+ +..+||..-.+-....+.+++|..+..+|..+..
T Consensus 244 I-~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~v 297 (462)
T 2ece_A 244 L-TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKV 297 (462)
T ss_dssp E-ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEE
T ss_pred E-ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEE
Confidence 1 11100 111111111 2367776542222244567666665688877653
No 318
>3v4v_A Integrin alpha-4; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_A*
Probab=21.08 E-value=8.6e+02 Score=26.79 Aligned_cols=132 Identities=15% Similarity=0.154 Sum_probs=71.0
Q ss_pred ceeEEEEECCEEEEEccCCCCcccceEEEEECCCCcEEEeecCC--CCCCCCcceEEEEEC----C-EEEEEcccCCCcC
Q 006334 29 WGHSACYSHGAVYIFGGCCGGLHFGDVLMLNLDTMVWSTLATTG--QGPGPRDSHSAILWG----H-KMIVFGGTNGYKK 101 (650)
Q Consensus 29 ~ghs~v~~~~~IyvfGG~~~~~~~~dv~~yD~~t~sW~~l~~~g--~~P~pR~~hsa~~~~----~-~lyVfGG~~~~~~ 101 (650)
.|+|+.+.++. +|+|.-........+++|+.....|....... .......++++++.+ + .-+|+|.- ....
T Consensus 167 ~G~Sa~~~~d~-~v~GApG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sy~GySva~gD~ngDG~~DlvvGAP-~~~~ 244 (597)
T 3v4v_A 167 AGISSFYTKDL-IVMGAPGSSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAP-QHEQ 244 (597)
T ss_dssp BTSSEEECSSE-EEEEETTHHHHTBEEEEEETTTTBCCBBCCTTCCSCTTCCBTSSEEEECSSCTTSCEEEEEET-TGGG
T ss_pred CceeeEecCCc-eEEccccccccccceEEEEccCceeeecccccccccccCcCccEEEEEEECCCCCeEEEEecc-cccC
Confidence 56777777775 56675332233457889999988886542211 111235566666532 3 34555532 2223
Q ss_pred cCeEEEEECCCCcEEeee-cCCCCCCCCcccEEEEEc---C--CEEEEEccccCCCCcccceEEEEec
Q 006334 102 VNDLHILDLESKEWMRPE-CRGAPPSPRESHTATLVG---D--DKMVIFGGSGEGEANYLNDLHVLDL 163 (650)
Q Consensus 102 ~ndv~~yD~~t~~W~~l~-~~~~~P~~R~~hs~~~~~---~--~~Lyv~GG~~~~~~~~~~dv~~yd~ 163 (650)
.-.+++|......|.... ..+.....+++.++++.. | ..| ++|--..........+++|--
T Consensus 245 ~G~V~v~~~~~~~~~~~~~l~G~~~g~~fG~sva~~D~ngDG~~Dl-vVGap~~~~~~~~G~v~vy~~ 311 (597)
T 3v4v_A 245 IGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDL-LVGAPMQSTIREEGRVFVYIN 311 (597)
T ss_dssp TCEEEEEEECSSSEEEEEEEECSSTTCCTTSEEEEECTTCSSSCEE-EEEETTCCSSSCCCEEEEEEE
T ss_pred CceEEEEecCCCceeEEEEecccccCCCCcceEEEEeeCCCCCceE-EEEcccccCCCcCCeEEEEEE
Confidence 457888877777887642 233344556666666541 2 355 555321111122356777743
No 319
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=20.83 E-value=6.3e+02 Score=25.12 Aligned_cols=196 Identities=12% Similarity=0.138 Sum_probs=0.0
Q ss_pred CCEEEEEccCCCCcccceEEEEECCCCc-----------EEEeecCCCCCC------------CCcceEEEEECC--EEE
Q 006334 37 HGAVYIFGGCCGGLHFGDVLMLNLDTMV-----------WSTLATTGQGPG------------PRDSHSAILWGH--KMI 91 (650)
Q Consensus 37 ~~~IyvfGG~~~~~~~~dv~~yD~~t~s-----------W~~l~~~g~~P~------------pR~~hsa~~~~~--~ly 91 (650)
++.+++.|+.++ .+.+||..+.. ....-.. .. ..........++ ..+
T Consensus 39 ~g~~la~g~~dg-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~---h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l 110 (447)
T 3dw8_B 39 SGELLATGDKGG-----RVVIFQQEQENKIQSHSRGEYNVYSTFQS---HEPEFDYLKSLEIEEKINKIRWLPQKNAAQF 110 (447)
T ss_dssp SSSEEEEEETTS-----EEEEEEECC-----CCCCCCEEEEEEEEC---CCCEEEGGGTEEECCCCCEEEECCCCSSSEE
T ss_pred CCCEEEEEcCCC-----eEEEEEecCCCCCCcccccceeEeccccc---ccccccccccccccCceEEEEEcCCCCcceE
Q ss_pred EEcccCCCcCcCeEEEEECCCCcEEeeecCC-------------------------------CCCCCCcccEEEEEcCCE
Q 006334 92 VFGGTNGYKKVNDLHILDLESKEWMRPECRG-------------------------------APPSPRESHTATLVGDDK 140 (650)
Q Consensus 92 VfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~-------------------------------~~P~~R~~hs~~~~~~~~ 140 (650)
+.|+.++.-..=++..-......+......+ .......-.++....++.
T Consensus 111 ~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 190 (447)
T 3dw8_B 111 LLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYE 190 (447)
T ss_dssp EEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS
T ss_pred EEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCC
Q ss_pred EEEEccccCCCCcccceEEEEecC--CCceeeccccCCCCCCCCcceeeee------cC-EEEEEeccCCCCccCeEEEE
Q 006334 141 MVIFGGSGEGEANYLNDLHVLDLK--TMRWASPAVKGDIPVPRDSHSSNVI------AN-RLFVYGGDCGDQYHGDIDML 211 (650)
Q Consensus 141 Lyv~GG~~~~~~~~~~dv~~yd~~--t~~Wt~i~~~~~lP~~R~~hs~v~~------~~-~Iyv~GG~~~~~~~n~v~~y 211 (650)
+++.| .+ ..+.+||+. ...+..+. ..+.....|...+. ++ .+++.|+.++ .+..|
T Consensus 191 ~l~s~-~d-------~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iw 254 (447)
T 3dw8_B 191 TYLSA-DD-------LRINLWHLEITDRSFNIVD---IKPANMEELTEVITAAEFHPNSCNTFVYSSSKG-----TIRLC 254 (447)
T ss_dssp EEEEE-CS-------SEEEEEETTEEEEEEEEEE---CCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS-----CEEEE
T ss_pred EEEEe-CC-------CeEEEEECCCCCceeeeee---cccccccccCcceEEEEECCCCCcEEEEEeCCC-----eEEEE
Q ss_pred ECCCCcE----EEeeecCCCCCc------------ccceEEEEECCEEEEEeccCCCcccCeEEEEECCC
Q 006334 212 DMNSLTW----SRLAIIGSSPGV------------RAGHAAINIGTKVYIIGGVGDKHYYNDIWILNVST 265 (650)
Q Consensus 212 d~~t~~W----~~i~~~g~~P~~------------R~~~s~v~~~~~IyI~GG~~~~~~~~dv~~yD~~t 265 (650)
|+.+... ...- ..... .........++++++.|+. + .+.+||+.+
T Consensus 255 d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~-----~v~iwd~~~ 315 (447)
T 3dw8_B 255 DMRASALCDRHSKLF---EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L-----SVKVWDLNM 315 (447)
T ss_dssp ETTTCSSSCTTCEEE---CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S-----EEEEEETTC
T ss_pred ECcCCccccceeeEe---ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C-----eEEEEeCCC
No 320
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=20.23 E-value=6.2e+02 Score=24.85 Aligned_cols=16 Identities=0% Similarity=-0.249 Sum_probs=11.4
Q ss_pred ceEEEEECC-CCcEEEe
Q 006334 53 GDVLMLNLD-TMVWSTL 68 (650)
Q Consensus 53 ~dv~~yD~~-t~sW~~l 68 (650)
+.+++||.. +++...+
T Consensus 167 ~~v~~~~~~~~g~~~~~ 183 (365)
T 1jof_A 167 NKLWTHRKLASGEVELV 183 (365)
T ss_dssp TEEEEEEECTTSCEEEE
T ss_pred CEEEEEEECCCCCEEEe
Confidence 578899987 6666543
Done!