BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006343
(649 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/578 (65%), Positives = 457/578 (79%), Gaps = 2/578 (0%)
Query: 1 MADRTSASYNAMITALINNN-CSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
M RT+ASYNAMITA +N I EA ++FA M RN++SYAAMITG R GM AEE
Sbjct: 167 MPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEE 226
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
LY+ P WRD VCSNALISGYLKVGR EEA RIFE M E+DV++W SMVDGYCKKG++
Sbjct: 227 LYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIG 286
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG-MAFNSITLTILFEAC 178
ARE+F++MPE+NVV WTAM+DG+MK+ C+E GF LFL MR+ G + N TLT++FEAC
Sbjct: 287 HARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEAC 346
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
F Y+EG+Q+HGLVSR GF++D+ LGN+II MY R F+ EA K+F MM+++D VSWN
Sbjct: 347 SEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWN 406
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
+LI+GYV N E+EE Y LFE+ KD +SWTTMITGFS+KG + KSIELF MMP++DD+
Sbjct: 407 ALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIA 466
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA+ISGFV N +YEEA WFIEMLRK VRPN LTLSSVLSASA ATLNQG QIH VV
Sbjct: 467 WTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVV 526
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
KM ME D+SIQNSLVS+Y+KCGNV D ++IFT+I+ NIVS+NSMI+GFAQNG GEEAL
Sbjct: 527 KMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALE 586
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF KM +EG PN+ITFL VLSAC HVGL+E+G+ YFKSMK+LY IEPGP HYAC+VD+L
Sbjct: 587 LFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLL 646
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L +AIDLI SM EP GVWGALLGA R HL LD+AKLAAQ + +LEPD+A PY
Sbjct: 647 GRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYA 706
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
VLS LYS G+ RD +VRM + LK ++KS G SWII+
Sbjct: 707 VLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWIIV 744
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 232/505 (45%), Gaps = 79/505 (15%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
V ++ I+ + + G +EA IF M K+ ++W +M+ Y + G + +AR++F+KMP++
Sbjct: 111 VHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQR 170
Query: 132 NVVAWTAMVDGYMKVD--CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
++ AM+ Y + + + LF MR NSI+ + R
Sbjct: 171 TTASYNAMITAYTRSNPMMIGEASKLFAEMRER----NSISYAAMITGLAR--------- 217
Query: 190 VHGLVSRFGFDY--------DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
G+V Y D + N++I+ Y ++G ++EA ++F M +RD +SW+S++
Sbjct: 218 -AGMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMV 276
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
GY G+I A LFERMP ++ V+WT MI G G
Sbjct: 277 DGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGC--------------------- 315
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
YE F F+ M ++ V+ N TL+ + A + +G Q+H V +M
Sbjct: 316 ----------YEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRM 365
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
E DV + N+++ +Y + VV+A +IF ++ +++VS+N++I+G+ QN EE LF
Sbjct: 366 GFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLF 425
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
K + + + I++ ++++ ++ G + + F+ M P + A I G
Sbjct: 426 EKTQQKDV----ISWTTMITGFSNKGKMGKSIELFRMM-------PKQDDIAWTAVISGF 474
Query: 481 AGS--LAEAIDLINSM---TFEPPPGVWGALL--GAGRTHLN--LDLAKLAAQHLMELEP 531
G+ EAI M P P ++L AG LN L + L + ME +
Sbjct: 475 VGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDL 534
Query: 532 DSATPYVVLSDLYSVIGKKRDGNRV 556
V +Y+ G DG+++
Sbjct: 535 SIQNSLV---SMYTKCGNVADGHQI 556
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/578 (65%), Positives = 457/578 (79%), Gaps = 2/578 (0%)
Query: 1 MADRTSASYNAMITALINNN-CSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
M RT+ASYNAMITA +N I EA ++FA M RN++SYAAMITG R GM AEE
Sbjct: 88 MPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEE 147
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
LY+ P WRD VCSNALISGYLKVGR EEA RIFE M E+DV++W SMVDGYCKKG++
Sbjct: 148 LYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIG 207
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG-MAFNSITLTILFEAC 178
ARE+F++MPE+NVV WTAM+DG+MK+ C+E GF LFL MR+ G + N TLT++FEAC
Sbjct: 208 HARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEAC 267
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
F Y+EG+Q+HGLVSR GF++D+ LGN+II MY R F+ EA K+F MM+++D VSWN
Sbjct: 268 SEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWN 327
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
+LI+GYV N E+EE Y LFE+ KD +SWTTMITGFS+KG + KSIELF MMP++DD+
Sbjct: 328 ALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIA 387
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA+ISGFV N +YEEA WFIEMLRK VRPN LTLSSVLSASA ATLNQG QIH VV
Sbjct: 388 WTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVV 447
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
KM ME D+SIQNSLVS+Y+KCGNV D ++IFT+I+ NIVS+NSMI+GFAQNG GEEAL
Sbjct: 448 KMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALE 507
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF KM +EG PN+ITFL VLSAC HVGL+E+G+ YFKSMK+LY IEPGP HYAC+VD+L
Sbjct: 508 LFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLL 567
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L +AIDLI SM EP GVWGALLGA R HL LD+AKLAAQ + +LEPD+A PY
Sbjct: 568 GRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYA 627
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
VLS LYS G+ RD +VRM + LK ++KS G SWII+
Sbjct: 628 VLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWIIV 665
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 232/505 (45%), Gaps = 79/505 (15%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
V ++ I+ + + G +EA IF M K+ ++W +M+ Y + G + +AR++F+KMP++
Sbjct: 32 VHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQR 91
Query: 132 NVVAWTAMVDGYMKVD--CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
++ AM+ Y + + + LF MR NSI+ + R
Sbjct: 92 TTASYNAMITAYTRSNPMMIGEASKLFAEMRER----NSISYAAMITGLAR--------- 138
Query: 190 VHGLVSRFGFDY--------DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
G+V Y D + N++I+ Y ++G ++EA ++F M +RD +SW+S++
Sbjct: 139 -AGMVDNAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMV 197
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
GY G+I A LFERMP ++ V+WT MI G G
Sbjct: 198 DGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGC--------------------- 236
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
YE F F+ M ++ V+ N TL+ + A + +G Q+H V +M
Sbjct: 237 ----------YEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRM 286
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
E DV + N+++ +Y + VV+A +IF ++ +++VS+N++I+G+ QN EE LF
Sbjct: 287 GFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLF 346
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
K + + + I++ ++++ ++ G + + F+ M P + A I G
Sbjct: 347 EKTQQKDV----ISWTTMITGFSNKGKMGKSIELFRMM-------PKQDDIAWTAVISGF 395
Query: 481 AGS--LAEAIDLINSM---TFEPPPGVWGALL--GAGRTHLN--LDLAKLAAQHLMELEP 531
G+ EAI M P P ++L AG LN L + L + ME +
Sbjct: 396 VGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDL 455
Query: 532 DSATPYVVLSDLYSVIGKKRDGNRV 556
V +Y+ G DG+++
Sbjct: 456 SIQNSLV---SMYTKCGNVADGHQI 477
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/604 (60%), Positives = 459/604 (75%), Gaps = 1/604 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + SYNAMITA+I N C + +A+E+F +P +NAVSYA MITGFVR G F EAE L
Sbjct: 107 MPVRATTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAECL 166
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y P ++RD V SN L+SGYL+VG+ EA R+FE M K+VV++ SMVDGYCK GR+++
Sbjct: 167 YAETPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILD 226
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACG 179
AR +FD+MPE+NV+ WTAM+DGY K FEDGF LFL MR+ G + NS TL ++F AC
Sbjct: 227 ARSLFDRMPERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACR 286
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
FFRYREG Q+HGL+SR ++D+ LGNS+I+MY +LG+M EA VF +M +D+VSWNS
Sbjct: 287 DFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNS 346
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
LI+G V +I EAY LFE+MPGKD VSWT MI GFS KG + K +ELF MMPEKDD+TW
Sbjct: 347 LITGLVQREQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDITW 406
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TA+IS FV+N YEEA WF +MLRK V PN T SSVLSA+A+ A L +G QIH VVK
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK 466
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
MNM +D+S+QNSLVS+Y KCGN DAY+IF+ I E NIVSYN+MISGF+ NG G+EA+ L
Sbjct: 467 MNMANDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGFSYNGFGKEAVKL 526
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F ++ G PN +TFL++LSAC HVG V+ G+ YFKSMK Y IEPGP+HYACMVD+ G
Sbjct: 527 FSMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDHYACMVDLFG 586
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
R+G L EA +LI++M EP GVWG+LL A +THL +DLA+LAA+ L+ELEPDSATPYVV
Sbjct: 587 RSGLLDEAYNLISTMPCEPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVV 646
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
LS LYS++GK D +R+ KK KRI+K PG SWIILK +VH FLAG +S L+L+EI T
Sbjct: 647 LSQLYSMVGKNSDCDRIMNIKKSKRIKKDPGSSWIILKGQVHNFLAGDESHLNLEEIAFT 706
Query: 600 LQTI 603
L I
Sbjct: 707 LDMI 710
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 209/445 (46%), Gaps = 72/445 (16%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+ IS + G +EA IF M + +V+W +M+ Y + G++ +A ++FD+MP +
Sbjct: 54 NSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRATT 113
Query: 135 AWTAMVDGYMKVDC-FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++ AM+ +K C ++LF + A + T+ F GRF + L
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKN-AVSYATMITGFVRAGRF------DEAECL 166
Query: 194 VSRFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ + D + N +++ Y R+G +EA +VF M+ ++ VS++S++ GY G I +
Sbjct: 167 YAETPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILD 226
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A LF+RMP ++ ++WT MI G+ +GF +
Sbjct: 227 ARSLFDRMPERNVITWTAMIDGY--------------------------FKAGF-----F 255
Query: 313 EEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
E+ F F+ M ++ DVR N TL+ + A +GSQIH + +M +E D+ + NS
Sbjct: 256 EDGFGLFLRMRQEGDVRVNSNTLAVMFRACRDFFRYREGSQIHGLLSRMPLEFDLFLGNS 315
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE----- 426
L+S+YSK G + +A +F + ++ VS+NS+I+G Q EA LF KM +
Sbjct: 316 LISMYSKLGYMGEAKAVFGVMKYKDSVSWNSLITGLVQREQISEAYELFEKMPGKDMVSW 375
Query: 427 --------------------GLVP--NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
G++P + IT+ +++SA G EE +F M
Sbjct: 376 TDMIKGFSGKGEISKCVELFGMMPEKDDITWTAMISAFVSNGYYEEALCWFHKM---LRK 432
Query: 465 EPGPEHYACMVDILGRAGSLAEAID 489
+ P Y +L SLA+ I+
Sbjct: 433 QVCPNSYT-FSSVLSATASLADLIE 456
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/616 (59%), Positives = 471/616 (76%), Gaps = 4/616 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M RT+ S NAMI+A I N C++ +A+E+F+ + RN VSYAAMI GFV+ G F+ AE+L
Sbjct: 98 MPQRTTVSNNAMISAYIRNGCNVGKAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKL 157
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y P +RD CSNALI+GYLK+G EA RIFE M E+DVV+W +MVDG C+ GRV
Sbjct: 158 YRETPYEFRDPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAA 217
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA-FNSITLTILFEACG 179
AR++FD+MP++NVV+W+AM+DGYM F++GF LF+ M+R G+ NS T+TI+F+ACG
Sbjct: 218 ARDLFDRMPDRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACG 277
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
R EG+Q+HGLVSR GF++D +L NS+ITMY LG D A+KVF +S +D V+WNS
Sbjct: 278 NCGRMSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNS 337
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
LISGY+HN E+E AYR+F RMP KD +SWT MI GFS G +E +IELFNM+P KDD W
Sbjct: 338 LISGYIHNNEVEAAYRVFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVW 397
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TAIISGFVNN +YEEA W+ M+ + +PN LT+SSVL+ASAA LN+G QIH ++K
Sbjct: 398 TAIISGFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILK 457
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
MN+E ++SIQNSL+S YSK GNVVDAYRIF ++ E N++SYNS+ISGFAQNG G+EAL +
Sbjct: 458 MNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDEALGI 517
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
++KM+ EG PN +TFL+VLSAC H GLV+EG+ F +MK+ Y IEP +HYACMVDILG
Sbjct: 518 YKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDILG 577
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L EAIDLI SM F+P GVWGA+LGA +THL LDLAKLAAQ + +LEP +ATPYVV
Sbjct: 578 RAGLLDEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQRITDLEPKNATPYVV 637
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
LS++YS GKK DG+ V+M K LK I+KSPGCSWI +K+KVHLFLAG +S ++EI+ T
Sbjct: 638 LSNMYSAAGKKIDGDLVKMAKNLKGIKKSPGCSWITMKNKVHLFLAGDQSHGSIEEIKTT 697
Query: 600 LQTISKGTKEFDWPKH 615
+ T+ +E W H
Sbjct: 698 ILTMD---REMQWLYH 710
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 190/372 (51%), Gaps = 27/372 (7%)
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLT 172
+ G V EA IF KMP KN +WTAM+ + + ++ LF M +R ++ N++
Sbjct: 53 RNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQRTTVSNNAMISA 112
Query: 173 ILFEAC--GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF--SM 228
+ C G+ + + LVS ++I + + G A K++ +
Sbjct: 113 YIRNGCNVGKAYELFSVLAERNLVSY----------AAMIMGFVKAGKFHMAEKLYRETP 162
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
RD N+LI+GY+ GE+ EA R+FE M +D VSW+ M+ G G + + +LF
Sbjct: 163 YEFRDPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLF 222
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATL 347
+ MP+++ V+W+A+I G++ ++E F F++M R+ V N T++ + A +
Sbjct: 223 DRMPDRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRM 282
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
++G QIH V ++ E D + NS++++YS G A ++F + +++IV++NS+ISG+
Sbjct: 283 SEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGY 342
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
N E A +F +M V + I++ ++++ + G VE L+N+ P
Sbjct: 343 IHNNEVEAAYRVFGRMP----VKDVISWTAMIAGFSKSGRVENAI-------ELFNMLPA 391
Query: 468 PEHYACMVDILG 479
+ + I G
Sbjct: 392 KDDFVWTAIISG 403
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 10/252 (3%)
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+I N+ I GR G + EA +F M ++ SW ++++ + NG+I+ A RLF+ MP
Sbjct: 41 LIQCNTQIAENGRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQ 100
Query: 263 KDFVSWTTMITGFSSKG-NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+ VS MI+ + G N+ K+ ELF+++ E++ V++ A+I GFV ++ A + + E
Sbjct: 101 RTTVSNNAMISAYIRNGCNVGKAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKLYRE 160
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCG 380
+ P S + L G A + NM E DV +++V + G
Sbjct: 161 TPYEFRDP-------ACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDG 213
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP-NQITFLSVL 439
V A +F + +RN+VS+++MI G+ G +E LF MK EGLV N T +
Sbjct: 214 RVAAARDLFDRMPDRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMF 273
Query: 440 SACNHVGLVEEG 451
AC + G + EG
Sbjct: 274 KACGNCGRMSEG 285
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 135/272 (49%), Gaps = 24/272 (8%)
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+ N+ I+ NG ++EA +F +MP K+ SWT M+T F+ G ++ + LF+ MP++
Sbjct: 42 IQCNTQIAENGRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQR 101
Query: 295 DDVTWTAIISGFVNNE-QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
V+ A+IS ++ N +A+ F + ++ ++S +A + +
Sbjct: 102 TTVSNNAMISAYIRNGCNVGKAYELFSVLAERN----------LVSYAAMIMGFVKAGKF 151
Query: 354 HAHVVKMNMES-----DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
H K+ E+ D + N+L++ Y K G V +A RIF N+ ER++VS+++M+ G
Sbjct: 152 HM-AEKLYRETPYEFRDPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLC 210
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
++G A +LF +M D N +++ +++ G +EGF F MK +E
Sbjct: 211 RDGRVAAARDLFDRMPDR----NVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNS 266
Query: 469 EHYACMVDILGRAGSLAEAID---LINSMTFE 497
M G G ++E + L++ + FE
Sbjct: 267 TTMTIMFKACGNCGRMSEGMQIHGLVSRLGFE 298
>gi|334183275|ref|NP_175765.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806499|sp|Q9C8L6.2|PPR80_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g53600, mitochondrial; Flags: Precursor
gi|332194847|gb|AEE32968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 717
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/606 (59%), Positives = 463/606 (76%), Gaps = 1/606 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + SYNAMITA+I N C + +A+E+F +P +NAVSYA MITGFVR G F EAE L
Sbjct: 107 MPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFL 166
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y P ++RDSV SN L+SGYL+ G+ EA R+F+ M K+VV+ SMV GYCK GR+++
Sbjct: 167 YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACG 179
AR +FD+M E+NV+ WTAM+DGY K FEDGF LFL MR+ G + NS TL ++F+AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F RYREG Q+HGLVSR ++D+ LGNS+++MY +LG+M EA VF +M +D+VSWNS
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
LI+G V +I EAY LFE+MPGKD VSWT MI GFS KG + K +ELF MMPEKD++TW
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITW 406
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TA+IS FV+N YEEA WF +ML+K+V PN T SSVLSA+A+ A L +G QIH VVK
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK 466
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
MN+ +D+S+QNSLVS+Y KCGN DAY+IF+ I E NIVSYN+MISG++ NG G++AL L
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKL 526
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F ++ G PN +TFL++LSAC HVG V+ G+ YFKSMK+ YNIEPGP+HYACMVD+LG
Sbjct: 527 FSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLG 586
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
R+G L +A +LI++M +P GVWG+LL A +THL +DLA+LAA+ L+ELEPDSATPYVV
Sbjct: 587 RSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVV 646
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
LS LYS+IGK RD +R+ KK KRI+K PG SWIILK +VH FLAG +S L+L+EI T
Sbjct: 647 LSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFT 706
Query: 600 LQTISK 605
L+ I K
Sbjct: 707 LKMIRK 712
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 214/446 (47%), Gaps = 74/446 (16%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+ IS + + G +EA IF M + +V+W +M+ Y + G++ +A ++FD+MP +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 135 AWTAMVDGYMKVDC-FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++ AM+ +K C ++LF + N+++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYA--------------------- 148
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVF--SMMSKRDAVSWNSLISGYVHNGEIE 251
++IT + R G DEA ++ + + RD+V+ N L+SGY+ G+
Sbjct: 149 --------------TMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWN 194
Query: 252 EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
EA R+F+ M K+ VS ++M+ G+ G + + LF+ M E++ +TWTA+I G+
Sbjct: 195 EAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGF 254
Query: 312 YEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+E+ F F+ M ++ DV+ N TL+ + A +GSQIH V +M +E D+ + N
Sbjct: 255 FEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGN 314
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE---- 426
SL+S+YSK G + +A +F + ++ VS+NS+I+G Q EA LF KM +
Sbjct: 315 SLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVS 374
Query: 427 ---------------------GLVP--NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
G++P + IT+ +++SA G EE +F M
Sbjct: 375 WTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM---LQ 431
Query: 464 IEPGPEHYACMVDILGRAGSLAEAID 489
E P Y +L SLA+ I+
Sbjct: 432 KEVCPNSYT-FSSVLSATASLADLIE 456
>gi|12324033|gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
Length = 839
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/599 (59%), Positives = 459/599 (76%), Gaps = 1/599 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + SYNAMITA+I N C + +A+E+F +P +NAVSYA MITGFVR G F EAE L
Sbjct: 107 MPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFL 166
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y P ++RDSV SN L+SGYL+ G+ EA R+F+ M K+VV+ SMV GYCK GR+++
Sbjct: 167 YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACG 179
AR +FD+M E+NV+ WTAM+DGY K FEDGF LFL MR+ G + NS TL ++F+AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F RYREG Q+HGLVSR ++D+ LGNS+++MY +LG+M EA VF +M +D+VSWNS
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
LI+G V +I EAY LFE+MPGKD VSWT MI GFS KG + K +ELF MMPEKD++TW
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITW 406
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TA+IS FV+N YEEA WF +ML+K+V PN T SSVLSA+A+ A L +G QIH VVK
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK 466
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
MN+ +D+S+QNSLVS+Y KCGN DAY+IF+ I E NIVSYN+MISG++ NG G++AL L
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKL 526
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F ++ G PN +TFL++LSAC HVG V+ G+ YFKSMK+ YNIEPGP+HYACMVD+LG
Sbjct: 527 FSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLG 586
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
R+G L +A +LI++M +P GVWG+LL A +THL +DLA+LAA+ L+ELEPDSATPYVV
Sbjct: 587 RSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVV 646
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
LS LYS+IGK RD +R+ KK KRI+K PG SWIILK +VH FLAG +S L+L+EI +
Sbjct: 647 LSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIAI 705
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 214/446 (47%), Gaps = 74/446 (16%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+ IS + + G +EA IF M + +V+W +M+ Y + G++ +A ++FD+MP +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 135 AWTAMVDGYMKVDC-FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++ AM+ +K C ++LF + N+++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYA--------------------- 148
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVF--SMMSKRDAVSWNSLISGYVHNGEIE 251
++IT + R G DEA ++ + + RD+V+ N L+SGY+ G+
Sbjct: 149 --------------TMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWN 194
Query: 252 EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
EA R+F+ M K+ VS ++M+ G+ G + + LF+ M E++ +TWTA+I G+
Sbjct: 195 EAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGF 254
Query: 312 YEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+E+ F F+ M ++ DV+ N TL+ + A +GSQIH V +M +E D+ + N
Sbjct: 255 FEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGN 314
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE---- 426
SL+S+YSK G + +A +F + ++ VS+NS+I+G Q EA LF KM +
Sbjct: 315 SLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVS 374
Query: 427 ---------------------GLVP--NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
G++P + IT+ +++SA G EE +F M
Sbjct: 375 WTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM---LQ 431
Query: 464 IEPGPEHYACMVDILGRAGSLAEAID 489
E P Y +L SLA+ I+
Sbjct: 432 KEVCPNSYT-FSSVLSATASLADLIE 456
>gi|8671867|gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
gb|AF151215 and contains multiple PPR PF|01535 repeats
[Arabidopsis thaliana]
Length = 816
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/599 (59%), Positives = 459/599 (76%), Gaps = 1/599 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + SYNAMITA+I N C + +A+E+F +P +NAVSYA MITGFVR G F EAE L
Sbjct: 107 MPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFL 166
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y P ++RDSV SN L+SGYL+ G+ EA R+F+ M K+VV+ SMV GYCK GR+++
Sbjct: 167 YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACG 179
AR +FD+M E+NV+ WTAM+DGY K FEDGF LFL MR+ G + NS TL ++F+AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F RYREG Q+HGLVSR ++D+ LGNS+++MY +LG+M EA VF +M +D+VSWNS
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
LI+G V +I EAY LFE+MPGKD VSWT MI GFS KG + K +ELF MMPEKD++TW
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITW 406
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TA+IS FV+N YEEA WF +ML+K+V PN T SSVLSA+A+ A L +G QIH VVK
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK 466
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
MN+ +D+S+QNSLVS+Y KCGN DAY+IF+ I E NIVSYN+MISG++ NG G++AL L
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKL 526
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F ++ G PN +TFL++LSAC HVG V+ G+ YFKSMK+ YNIEPGP+HYACMVD+LG
Sbjct: 527 FSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLG 586
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
R+G L +A +LI++M +P GVWG+LL A +THL +DLA+LAA+ L+ELEPDSATPYVV
Sbjct: 587 RSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVV 646
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
LS LYS+IGK RD +R+ KK KRI+K PG SWIILK +VH FLAG +S L+L+EI +
Sbjct: 647 LSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIAI 705
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 214/446 (47%), Gaps = 74/446 (16%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+ IS + + G +EA IF M + +V+W +M+ Y + G++ +A ++FD+MP +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 135 AWTAMVDGYMKVDC-FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++ AM+ +K C ++LF + N+++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYA--------------------- 148
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVF--SMMSKRDAVSWNSLISGYVHNGEIE 251
++IT + R G DEA ++ + + RD+V+ N L+SGY+ G+
Sbjct: 149 --------------TMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWN 194
Query: 252 EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
EA R+F+ M K+ VS ++M+ G+ G + + LF+ M E++ +TWTA+I G+
Sbjct: 195 EAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGF 254
Query: 312 YEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+E+ F F+ M ++ DV+ N TL+ + A +GSQIH V +M +E D+ + N
Sbjct: 255 FEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGN 314
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE---- 426
SL+S+YSK G + +A +F + ++ VS+NS+I+G Q EA LF KM +
Sbjct: 315 SLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVS 374
Query: 427 ---------------------GLVP--NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
G++P + IT+ +++SA G EE +F M
Sbjct: 375 WTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM---LQ 431
Query: 464 IEPGPEHYACMVDILGRAGSLAEAID 489
E P Y +L SLA+ I+
Sbjct: 432 KEVCPNSYT-FSSVLSATASLADLIE 456
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/596 (59%), Positives = 456/596 (76%), Gaps = 5/596 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+ D ASYNAMITA N + EAFE+F++MP RN+VSYA MITGFV GMF AE+L
Sbjct: 104 IPDPNVASYNAMITAYHRRNM-VDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKL 162
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ P V SN LI+GY KVGR E+A RIF+ M EKDVV+W SM+ G C+ G+++E
Sbjct: 163 HREKPV----IVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVE 218
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FDKMP++NVV WT M+DGYMK++ +DGF LFL+MRR G+ N+ TLT+L EACG
Sbjct: 219 ARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGS 278
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F RY EG+Q+HGLV GFD D L NSIITMY R +D A K F +M K+D V+WNSL
Sbjct: 279 FDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSL 338
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GYV +G +E+A LFE MP KD VSWTT+I GF+S+G +++ I LF MMPEKD + WT
Sbjct: 339 ITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWT 398
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+ISG V+ E+YE AF WFI+ML+ ++PN TLS VLSA A+ A LNQG QIHA V KM
Sbjct: 399 AVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKM 458
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ME+D+SIQNSLVS+YSKCGNV DA ++F I N+V+YN++I+G AQNGLG+EAL +F
Sbjct: 459 SMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIF 518
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KM+D+ LVPN ITFL VLSAC HVGLVEEG YF M++LY+I+P P+HYACMVD+L R
Sbjct: 519 TKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCR 578
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG EA+ L++SM F+P GVWGA+LGA THL LD+A+LAAQ+L ELEP+SATPYV+L
Sbjct: 579 AGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVIL 638
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
S+L+S+ G +R +R+ KK + ++KSPGCSWIILKD+VHLF AG +S ++KE+
Sbjct: 639 SNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQSIKNIKEM 694
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 190/359 (52%), Gaps = 43/359 (11%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
V N+ I+ + G +EA IF M K+ V+W +++ Y + + +ARE+F+K+P+
Sbjct: 48 VYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDP 107
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQV 190
NV ++ AM+ Y + + ++ F+LF SM +R +++ T+ F G F E +
Sbjct: 108 NVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSY--ATMITGFVHAG-MFDMAEKLHR 164
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
V I+ N +I Y ++G +++A ++F M+++D VSW+S+ISG G+I
Sbjct: 165 EKPV--------IVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKI 216
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
EA +LF++MP ++ V+WT MI G+ L
Sbjct: 217 VEARKLFDKMPDRNVVTWTLMIDGYMKMNFL----------------------------- 247
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
++ F F+ M R+ V N TL+ +L A + +G QIH V+ + + D + N
Sbjct: 248 --KDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLAN 305
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
S++++YS+C ++ A + F + +++IV++NS+I+G+ Q+G E+A+ LF M + +V
Sbjct: 306 SIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVV 364
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 130/257 (50%), Gaps = 45/257 (17%)
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
++ NS IT GR G + EA +F+ M ++ VSW +L++ Y N EI +A +F ++P
Sbjct: 47 LVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPD 106
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
+ S+ MIT + + ++++ ELF+ MP+++ V++ +I+GFV+ + +M
Sbjct: 107 PNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMF--------DM 158
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
K R + +SS N L++ YSK G V
Sbjct: 159 AEKLHREKPVIVSS---------------------------------NVLINGYSKVGRV 185
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
DA RIF + E+++VS++SMISG + G EA LF KM D N +T+ ++
Sbjct: 186 EDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDR----NVVTWTLMIDGY 241
Query: 443 NHVGLVEEGFIYFKSMK 459
+ +++GFI F +M+
Sbjct: 242 MKMNFLKDGFILFLNMR 258
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/596 (59%), Positives = 456/596 (76%), Gaps = 5/596 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+ D ASYNAMITA N + EAFE+F++MP RN+VSYA MITGFV GMF AE+L
Sbjct: 112 IPDPNVASYNAMITAYHRRNM-VDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKL 170
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ P V SN LI+GY KVGR E+A RIF+ M EKDVV+W SM+ G C+ G+++E
Sbjct: 171 HREKPV----IVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVE 226
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FDKMP++NVV WT M+DGYMK++ +DGF LFL+MRR G+ N+ TLT+L EACG
Sbjct: 227 ARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGS 286
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F RY EG+Q+HGLV GFD D L NSIITMY R +D A K F +M K+D V+WNSL
Sbjct: 287 FDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSL 346
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GYV +G +E+A LFE MP KD VSWTT+I GF+S+G +++ I LF MMPEKD + WT
Sbjct: 347 ITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWT 406
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+ISG V+ E+YE AF WFI+ML+ ++PN TLS VLSA A+ A LNQG QIHA V KM
Sbjct: 407 AVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKM 466
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ME+D+SIQNSLVS+YSKCGNV DA ++F I N+V+YN++I+G AQNGLG+EAL +F
Sbjct: 467 SMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIF 526
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KM+D+ LVPN ITFL VLSAC HVGLVEEG YF M++LY+I+P P+HYACMVD+L R
Sbjct: 527 TKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCR 586
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG EA+ L++SM F+P GVWGA+LGA THL LD+A+LAAQ+L ELEP+SATPYV+L
Sbjct: 587 AGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVIL 646
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
S+L+S+ G +R +R+ KK + ++KSPGCSWIILKD+VHLF AG +S ++KE+
Sbjct: 647 SNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQSIKNIKEM 702
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 190/359 (52%), Gaps = 43/359 (11%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
V N+ I+ + G +EA IF M K+ V+W +++ Y + + +ARE+F+K+P+
Sbjct: 56 VYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDP 115
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQV 190
NV ++ AM+ Y + + ++ F+LF SM +R +++ T+ F G F E +
Sbjct: 116 NVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSY--ATMITGFVHAG-MFDMAEKLHR 172
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
V I+ N +I Y ++G +++A ++F M+++D VSW+S+ISG G+I
Sbjct: 173 EKPV--------IVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKI 224
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
EA +LF++MP ++ V+WT MI G+ L
Sbjct: 225 VEARKLFDKMPDRNVVTWTLMIDGYMKMNFL----------------------------- 255
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
++ F F+ M R+ V N TL+ +L A + +G QIH V+ + + D + N
Sbjct: 256 --KDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLAN 313
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
S++++YS+C ++ A + F + +++IV++NS+I+G+ Q+G E+A+ LF M + +V
Sbjct: 314 SIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVV 372
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 130/257 (50%), Gaps = 45/257 (17%)
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
++ NS IT GR G + EA +F+ M ++ VSW +L++ Y N EI +A +F ++P
Sbjct: 55 LVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPD 114
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
+ S+ MIT + + ++++ ELF+ MP+++ V++ +I+GFV+ + +M
Sbjct: 115 PNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMF--------DM 166
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
K R + +SS N L++ YSK G V
Sbjct: 167 AEKLHREKPVIVSS---------------------------------NVLINGYSKVGRV 193
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
DA RIF + E+++VS++SMISG + G EA LF KM D N +T+ ++
Sbjct: 194 EDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDR----NVVTWTLMIDGY 249
Query: 443 NHVGLVEEGFIYFKSMK 459
+ +++GFI F +M+
Sbjct: 250 MKMNFLKDGFILFLNMR 266
>gi|255581219|ref|XP_002531422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528972|gb|EEF30964.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 619
Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust.
Identities = 292/439 (66%), Positives = 363/439 (82%), Gaps = 1/439 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +RT+A+YNAMITA I N+C + EAF +F+ M RNAVSY AMITGF++ GMF +AE L
Sbjct: 52 MPERTTATYNAMITAYIRNSCMVDEAFSLFSRMSERNAVSYGAMITGFLKAGMFEKAENL 111
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y +PA+WR+ VCSNA+ISGYLKVGR EEA ++FE VEKDVV+W SMVDGYCKKGR+ E
Sbjct: 112 YREIPAKWREPVCSNAMISGYLKVGRLEEAIKVFEGTVEKDVVSWSSMVDGYCKKGRIFE 171
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
ARE+F+ MP +NVV WT+M+DGYM V FE+GF LFLSMRR + N +TLTI+FEAC
Sbjct: 172 ARELFNMMPVRNVVTWTSMIDGYMNVGFFENGFSLFLSMRRV-IEVNPLTLTIMFEACRH 230
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F RYRE +QVHGLV R GF++DI LGNSII MY G MDEA ++F MM+ +D VSWNSL
Sbjct: 231 FGRYREAMQVHGLVLRIGFEFDIFLGNSIIAMYCEFGCMDEAKRMFQMMNNKDVVSWNSL 290
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
ISGY+ + EIEEAY+LFE++PGKD VSWTTMITGFS+KGN++K I+LF +MPEKDDV WT
Sbjct: 291 ISGYIQHDEIEEAYKLFEKIPGKDVVSWTTMITGFSAKGNVQKGIQLFKIMPEKDDVAWT 350
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+ISGFV+N +YEEAF WFIEML+K V+PN LT SS+L+ASA+ ATLNQG QIHAHV KM
Sbjct: 351 AVISGFVSNGEYEEAFLWFIEMLKKAVKPNSLTFSSMLTASASLATLNQGLQIHAHVEKM 410
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+++ D+SI+NSLVS+YSKCGN+ +AY++FT+I+ NI+S+NSMI+GF+QNG GEEAL+LF
Sbjct: 411 DVQFDLSIRNSLVSMYSKCGNIAEAYQVFTSINAPNIISFNSMITGFSQNGHGEEALDLF 470
Query: 421 RKMKDEGLVPNQITFLSVL 439
KM+ E PN+ITFL L
Sbjct: 471 SKMRKENQEPNEITFLDYL 489
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 195/393 (49%), Gaps = 63/393 (16%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+I+ + G EE+ IF M K+V+ SM+ Y K G++ +A+++FD+MPE+ +
Sbjct: 1 MINKHGNNGNIEESESIFNRMPHKNVITHTSMLTAYAKNGQIAKAKKLFDEMPERTTATY 60
Query: 137 TAMVDGYMKVDCFED-GFDLFLSM-RRGGMAFNSITLTIL----FEACGRFFR-----YR 185
AM+ Y++ C D F LF M R +++ ++ L FE +R +R
Sbjct: 61 NAMITAYIRNSCMVDEAFSLFSRMSERNAVSYGAMITGFLKAGMFEKAENLYREIPAKWR 120
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
E V N++I+ Y ++G ++EA KVF ++D VSW+S++ GY
Sbjct: 121 EPV----------------CSNAMISGYLKVGRLEEAIKVFEGTVEKDVVSWSSMVDGYC 164
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
G I EA LF MP ++ V+WT+MI G+ + G E LF M
Sbjct: 165 KKGRIFEARELFNMMPVRNVVTWTSMIDGYMNVGFFENGFSLFLSM-------------- 210
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
R+ + N LTL+ + A + Q+H V+++ E D
Sbjct: 211 ------------------RRVIEVNPLTLTIMFEACRHFGRYREAMQVHGLVLRIGFEFD 252
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ + NS++++Y + G + +A R+F ++ +++VS+NS+ISG+ Q+ EEA LF K+
Sbjct: 253 IFLGNSIIAMYCEFGCMDEAKRMFQMMNNKDVVSWNSLISGYIQHDEIEEAYKLFEKIPG 312
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
+ +V ++ ++++ + G V++G FK M
Sbjct: 313 KDVV----SWTTMITGFSAKGNVQKGIQLFKIM 341
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 131/252 (51%), Gaps = 13/252 (5%)
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+I+ + +NG IEE+ +F RMP K+ ++ T+M+T ++ G + K+ +LF+ MPE+ T+
Sbjct: 1 MINKHGNNGNIEESESIFNRMPHKNVITHTSMLTAYAKNGQIAKAKKLFDEMPERTTATY 60
Query: 300 TAIISGFVNNE-QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
A+I+ ++ N +EAF F M + N ++ ++++ + ++ +
Sbjct: 61 NAMITAYIRNSCMVDEAFSLFSRMSER----NAVSYGAMITGFLKAGMFEKAENLYREIP 116
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
E S N+++S Y K G + +A ++F E+++VS++SM+ G+ + G EA
Sbjct: 117 AKWREPVCS--NAMISGYLKVGRLEEAIKVFEGTVEKDVVSWSSMVDGYCKKGRIFEARE 174
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF M V N +T+ S++ +VG E GF F SM+ + IE P M +
Sbjct: 175 LFNMMP----VRNVVTWTSMIDGYMNVGFFENGFSLFLSMRRV--IEVNPLTLTIMFEAC 228
Query: 479 GRAGSLAEAIDL 490
G EA+ +
Sbjct: 229 RHFGRYREAMQV 240
>gi|325260825|gb|ADZ04643.1| hypothetical protein [Oryza punctata]
Length = 674
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 271/582 (46%), Positives = 387/582 (66%), Gaps = 9/582 (1%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+NA+++ + A +F MP +NAVSY A+I+G + GM EAE +
Sbjct: 95 MPRRNAPSWNALLSVYLRAA-RPRAAHALFYKMPAKNAVSYGAIISGLAKAGMLREAELV 153
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y MP +WRD V SNAL++GYL+VG A R+FE M +DV++W +MVDG CK G V E
Sbjct: 154 YEEMPQQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSE 213
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD MPE++VV+WT+M+ GY+K DG LFL+MRR G+ N+ TL+++ +AC
Sbjct: 214 ARRVFDAMPERSVVSWTSMIRGYVKRGMCSDGLLLFLNMRREGVQVNATTLSVVLDACAG 273
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
REG+Q+H L+ GF+ DI LG+S+I MY R G+M +A + F+ M ++D VSWNSL
Sbjct: 274 ASLAREGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMADAQRAFNCMQQKDIVSWNSL 333
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GYV + +EEA+ LF+ MP KD VSWT+M+ GF+++G + +S+ELF MP KD V WT
Sbjct: 334 ITGYVQHDMVEEAHVLFKLMPQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDVVAWT 393
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
AIIS F+ N Y A RWF M ++ +PN +T S +LSA A+ A LNQG Q HA+ + M
Sbjct: 394 AIISSFITNGDYLSAVRWFCRMSQEGCKPNTITFSCLLSALASLAMLNQGRQAHAYSINM 453
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
D ++ SL+S+Y+KCG + +A+ +F++I ++++ NSMI+ F Q+G E+AL LF
Sbjct: 454 GWVFDSAVHTSLISMYAKCGRLAEAHHVFSSISNPSLIAINSMITAFVQHGFAEDALKLF 513
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KM++ G PN +TFL +L+ C G V++G+ YF+SM+ +Y +EP PEHY CMVD+LGR
Sbjct: 514 TKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGR 573
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG LAEA+++INSM W ALL A H NL AK+AAQ L+E +P AT Y VL
Sbjct: 574 AGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVL 633
Query: 541 SDLYSVIGKKRDGNRVRMKKKLK---RIRKSPGCSWIILKDK 579
S ++S G + + M+K ++ K PG S +I++DK
Sbjct: 634 SKMFSSAGMEYE----EMQKVVQLSNMASKRPGYS-LIMQDK 670
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 214/431 (49%), Gaps = 49/431 (11%)
Query: 30 FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEE 89
A + + A + AA+ G R E E P R + NAL++ Y + GR +
Sbjct: 1 MAALRLPRAPATAALAGGVSHRFPASEVEP----PPPRGPNRAHLNALLTAYGRRGRLRD 56
Query: 90 AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
A +F+ M +DV++W +++ Y G + AR +FD MP +N +W A++ Y++
Sbjct: 57 AQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPSWNALLSVYLRAARP 116
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
LF M A N+++ +I
Sbjct: 117 RAAHALFYKMP----AKNAVSY-----------------------------------GAI 137
Query: 210 ITMYGRLGFMDEANKVFSMMSK--RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS 267
I+ + G + EA V+ M + RD V N+L++GY+ GE+ A R+FE M +D +S
Sbjct: 138 ISGLAKAGMLREAELVYEEMPQQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVIS 197
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
W+ M+ G G++ ++ +F+ MPE+ V+WT++I G+V + F+ M R+ V
Sbjct: 198 WSAMVDGLCKHGSVSEARRVFDAMPERSVVSWTSMIRGYVKRGMCSDGLLLFLNMRREGV 257
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+ N TLS VL A A + +G QIH ++ M E D+ + +S++ +YS+ G + DA R
Sbjct: 258 QVNATTLSVVLDACAGASLAREGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMADAQR 317
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
F + +++IVS+NS+I+G+ Q+ + EEA LF+ M + + +++ S++ + G
Sbjct: 318 AFNCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMPQK----DAVSWTSMVVGFANRGW 373
Query: 448 VEEGFIYFKSM 458
+ E F+ M
Sbjct: 374 MRESVELFEQM 384
>gi|115474659|ref|NP_001060926.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|42408463|dbj|BAD09644.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50725835|dbj|BAD33365.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113622895|dbj|BAF22840.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|215704880|dbj|BAG94908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712334|dbj|BAG94461.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 674
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/579 (46%), Positives = 383/579 (66%), Gaps = 3/579 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+NA+++ + A +F MP +NAVSY A+I+G + M +EAE +
Sbjct: 95 MPRRNAPSWNALLSVYLRAA-RPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELV 153
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y MP +WRD V SNAL++GYL+VG A R+FE M +DV++W +MVDG CK G V E
Sbjct: 154 YEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSE 213
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD MPE+NVV+WT+M+ GY+K DG LFL+MRR G+ N+ TL++ +AC
Sbjct: 214 ARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAA 273
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
REG+Q+H L+ GF+ DI LG+SII MY R G+M +A + F M ++D VSWNSL
Sbjct: 274 ASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSL 333
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GYV + +EEA+ LF+ M KD VSWT+M+ GF+++G + +S+ELF MP KD+V WT
Sbjct: 334 ITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWT 393
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
AIIS F+ N Y A RWF M ++ +PN + S +LSA A+ A LNQG Q HA+ + M
Sbjct: 394 AIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINM 453
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
D ++ SLVS+Y+KCG + +AY +F++I ++++ NSMI+ F Q+G E+AL LF
Sbjct: 454 GWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLF 513
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KM++ G PN +TFL +L+ C G V++G+ YF+SM+ +Y +EP PEHY CMVD+LGR
Sbjct: 514 TKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGR 573
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG LAEA+++INSM W ALL A H NL AK+AAQ L+E +P AT Y VL
Sbjct: 574 AGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVL 633
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
S ++S G + D +++ + K PG S +I++DK
Sbjct: 634 SRMFSSAGME-DEEMLKVVQLSNLASKRPGYS-LIMQDK 670
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 195/385 (50%), Gaps = 43/385 (11%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NAL++ Y + GR +A +F+ M +DV++W +++ Y G + AR +FD MP +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W A++ Y++ LF M A N+++ + + E V+
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMP----AKNAVSYGAIISGLAKAEMLHEAELVY--- 154
Query: 195 SRFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ + D + N+++ Y R+G + A +VF M+ RD +SW++++ G +G + EA
Sbjct: 155 EEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEA 214
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
R+F+ MP ++ VSWT+MI G+ +G + L
Sbjct: 215 RRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLL-------------------------- 248
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
F+ M R+ V+ N TLS L A AA + +G QIH ++ M E D+ + +S++
Sbjct: 249 -----FLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSII 303
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+YS+ G +VDA R F + +++IVS+NS+I+G+ Q+ + EEA LF+ M + + +
Sbjct: 304 IMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQK----DAV 359
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSM 458
++ S++ + G + E F+ M
Sbjct: 360 SWTSMVVGFANRGWMRESVELFEQM 384
>gi|325260820|gb|ADZ04639.1| hypothetical protein [Oryza glaberrima]
Length = 674
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/579 (46%), Positives = 383/579 (66%), Gaps = 3/579 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+NA+++ + A +F MP +NAVSY A+I+G + M +EAE +
Sbjct: 95 MPRRNAPSWNALLSVYLRAA-RPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELV 153
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y MP +WRD V SNAL++GYL+VG A R+FE M +DV++W +MVDG CK G V E
Sbjct: 154 YEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSE 213
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD MPE+NVV+WT+M+ GY+K DG LFL+MRR G+ N+ TL++ +AC
Sbjct: 214 ARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAV 273
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
REG+Q+H L+ GF+ DI LG+SII MY R G+M +A + F M ++D VSWNSL
Sbjct: 274 ASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSL 333
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GYV + +EEA+ LF+ M KD VSWT+M+ GF+++G + +S+ELF MP KD+V WT
Sbjct: 334 ITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWT 393
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
AIIS F+ N Y A RWF M ++ +PN + S +LSA A+ A LNQG Q HA+ + M
Sbjct: 394 AIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINM 453
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
D ++ SLVS+Y+KCG + +AY +F++I ++++ NSMI+ F Q+G E+AL LF
Sbjct: 454 GWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLF 513
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KM++ G PN +TFL +L+ C G V++G+ YF+SM+ +Y +EP PEHY CMVD+LGR
Sbjct: 514 TKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGR 573
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG LAEA+++INSM W ALL A H NL AK+AAQ L+E +P AT Y VL
Sbjct: 574 AGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVL 633
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
S ++S G + D +++ + K PG S +I++DK
Sbjct: 634 SRMFSSAGME-DEEMLKVVQLSNLASKRPGYS-LIMQDK 670
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 194/385 (50%), Gaps = 43/385 (11%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NAL++ Y + GR +A +F+ M +DV++W +++ Y G + AR +FD MP +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W A++ Y++ LF M A N+++ + + E V+
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMP----AKNAVSYGAIISGLAKAEMLHEAELVY--- 154
Query: 195 SRFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ + D + N+++ Y R+G + A +VF M+ RD +SW++++ G +G + EA
Sbjct: 155 EEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEA 214
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
R+F+ MP ++ VSWT+MI G+ +G + L
Sbjct: 215 RRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLL-------------------------- 248
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
F+ M R+ V+ N TLS L A A + +G QIH ++ M E D+ + +S++
Sbjct: 249 -----FLNMRREGVQVNTTTLSVALDACAVASLAREGIQIHNLIISMGFELDIFLGDSII 303
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+YS+ G +VDA R F + +++IVS+NS+I+G+ Q+ + EEA LF+ M + + +
Sbjct: 304 IMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQK----DAV 359
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSM 458
++ S++ + G + E F+ M
Sbjct: 360 SWTSMVVGFANRGWMRESVELFEQM 384
>gi|357139571|ref|XP_003571354.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/574 (47%), Positives = 387/574 (67%), Gaps = 1/574 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R +AS+NA+++ + A +F+ MP RNAVSY AMI+G R GM EAE +
Sbjct: 99 MPRRNAASWNALLSLYLRAG-QPAAAHALFSKMPARNAVSYGAMISGLARAGMLREAEAV 157
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP RWRD V SNALI+ Y++ G A R+FE M +DV++W ++VDG CK G V+E
Sbjct: 158 FAEMPWRWRDPVGSNALIAAYVRAGELSLALRVFEGMAVRDVISWTAVVDGLCKNGSVLE 217
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++F+ MPE+NVV+WT+M+ GY+K+ DG LF +MRR G+ N+ TL++ +AC
Sbjct: 218 ARKVFEAMPERNVVSWTSMILGYVKLGRRRDGLLLFQNMRREGVQVNTTTLSVALDACAE 277
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
REG+Q+HGL+ GF+ D+ LG+S+IT+Y R G+M +A +VF+ M+ +D VSWNSL
Sbjct: 278 SSLVREGIQIHGLIIAMGFEMDVFLGDSLITLYSRFGWMVDARRVFAYMTWKDVVSWNSL 337
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GYV + +EEA+ LF+ MP KD VSWT+M+ GF+++G + ++IELF MP KD+V WT
Sbjct: 338 ITGYVQHNMVEEAHVLFKLMPEKDAVSWTSMVVGFANRGWITEAIELFEQMPGKDEVAWT 397
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+IS V N Y A RWF M ++ +PN + S +LSA A+ LNQG Q HA+ + M
Sbjct: 398 AVISSLVTNGDYLSAVRWFCRMAQEGCKPNTIAFSCLLSALASLTMLNQGMQAHAYAINM 457
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
D SI SLVS+Y+KCG + +AY +F++I ++++ NSMI+ F Q+ L E+A LF
Sbjct: 458 GWIFDSSIHTSLVSMYAKCGRLAEAYHVFSSISNPSLIATNSMITAFVQHDLVEDAFKLF 517
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KM+++G PN +TFL +L+ C GLV++G+ YF SMK++Y IEP P+HY CMVD+LGR
Sbjct: 518 TKMQNDGHKPNHVTFLGILTGCARAGLVQQGYNYFGSMKSVYGIEPNPDHYTCMVDLLGR 577
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG LAEA+++INSM W ALL A H +L AK+AAQ L+E++P AT Y VL
Sbjct: 578 AGLLAEALEMINSMPQNDNSDAWAALLSASSLHSSLTFAKIAAQKLLEMDPYDATAYTVL 637
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
S+++S G K D +++ + KSPG S I
Sbjct: 638 SNMFSSAGMKNDEEMLKVVQLSNMASKSPGYSLI 671
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 194/385 (50%), Gaps = 43/385 (11%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NAL++ Y + G +A ++F+ M +DV++W +++ Y G AR +FD MP +N
Sbjct: 46 NALLTSYGRRGMLRDAQQLFDRMPRRDVISWTALLTAYADNGDPASARLVFDDMPRRNAA 105
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W A++ Y++ LF M A N+++ + R RE V +
Sbjct: 106 SWNALLSLYLRAGQPAAAHALFSKMP----ARNAVSYGAMISGLARAGMLREAEAVFAEM 161
Query: 195 S-RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
R+ D + N++I Y R G + A +VF M+ RD +SW +++ G NG + EA
Sbjct: 162 PWRW---RDPVGSNALIAAYVRAGELSLALRVFEGMAVRDVISWTAVVDGLCKNGSVLEA 218
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
++FE MP ++ VSWT+MI G+ G + LF
Sbjct: 219 RKVFEAMPERNVVSWTSMILGYVKLGRRRDGLLLFQ------------------------ 254
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
M R+ V+ N TLS L A A ++ + +G QIH ++ M E DV + +SL+
Sbjct: 255 -------NMRREGVQVNTTTLSVALDACAESSLVREGIQIHGLIIAMGFEMDVFLGDSLI 307
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+LYS+ G +VDA R+F + +++VS+NS+I+G+ Q+ + EEA LF+ M ++ + +
Sbjct: 308 TLYSRFGWMVDARRVFAYMTWKDVVSWNSLITGYVQHNMVEEAHVLFKLMPEK----DAV 363
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSM 458
++ S++ + G + E F+ M
Sbjct: 364 SWTSMVVGFANRGWITEAIELFEQM 388
>gi|125602089|gb|EAZ41414.1| hypothetical protein OsJ_25936 [Oryza sativa Japonica Group]
Length = 1165
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 263/548 (47%), Positives = 367/548 (66%), Gaps = 1/548 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+NA+++ + A +F MP +NAVSY A+I+G + M +EAE +
Sbjct: 95 MPRRNAPSWNALLSVYLRAA-RPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELV 153
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y MP +WRD V SNAL++GYL+VG A R+FE M +DV++W +MVDG CK G V E
Sbjct: 154 YEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSE 213
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD MPE+NVV+WT+M+ GY+K DG LFL+MRR G+ N+ TL++ +AC
Sbjct: 214 ARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAA 273
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
REG+Q+H L+ GF+ DI LG+SII MY R G+M +A + F M ++D VSWNSL
Sbjct: 274 ASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSL 333
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GYV + +EEA+ LF+ M KD VSWT+M+ GF+++G + +S+ELF MP KD+V WT
Sbjct: 334 ITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWT 393
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
AIIS F+ N Y A RWF M ++ +PN + S +LSA A+ A LNQG Q HA+ + M
Sbjct: 394 AIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINM 453
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
D ++ SLVS+Y+KCG + +AY +F++I ++++ NSMI+ F Q+G E+AL LF
Sbjct: 454 GWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLF 513
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KM++ G PN +TFL +L+ C G V++G+ YF+SM+ +Y +EP PEHY CMVD+LGR
Sbjct: 514 TKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGR 573
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG LAEA+++INSM W ALL A H NL AK+AAQ L+E +P AT Y VL
Sbjct: 574 AGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVL 633
Query: 541 SDLYSVIG 548
S ++S G
Sbjct: 634 SRMFSSAG 641
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 195/385 (50%), Gaps = 43/385 (11%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NAL++ Y + GR +A +F+ M +DV++W +++ Y G + AR +FD MP +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W A++ Y++ LF M A N+++ + + E V+
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMP----AKNAVSYGAIISGLAKAEMLHEAELVY--- 154
Query: 195 SRFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ + D + N+++ Y R+G + A +VF M+ RD +SW++++ G +G + EA
Sbjct: 155 EEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEA 214
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
R+F+ MP ++ VSWT+MI G+ +G + L
Sbjct: 215 RRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLL-------------------------- 248
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
F+ M R+ V+ N TLS L A AA + +G QIH ++ M E D+ + +S++
Sbjct: 249 -----FLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSII 303
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+YS+ G +VDA R F + +++IVS+NS+I+G+ Q+ + EEA LF+ M + + +
Sbjct: 304 IMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQK----DAV 359
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSM 458
++ S++ + G + E F+ M
Sbjct: 360 SWTSMVVGFANRGWMRESVELFEQM 384
>gi|18481717|gb|AAL73539.1|AF466200_18 hypothetical protein S250_18C08.29 [Sorghum bicolor]
Length = 679
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/580 (47%), Positives = 389/580 (67%), Gaps = 2/580 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R +AS+NA+++ + A +F P +NAVSY A+ITG R GM EA+ +
Sbjct: 98 MPLRNAASWNALVSLYLRAG-RPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAV 156
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y MP RWRD V SNA+I GYL+ G A R+F+ M +DV++W +MVDG CK G V E
Sbjct: 157 YWEMPPRWRDPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSE 216
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +F+ MPE+NVV+WT+M+ GY+K + DG LFL MRR G+ N ITL+++ + C +
Sbjct: 217 ARRLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQ 276
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
EG QVH L+ R GF DI LG+S+I MY R G M +A +FS M+++D VSWNSL
Sbjct: 277 ASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSL 336
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GYV N IE+A+ LF+ MP KD +SWT+M+ GF+++G + +S+ELF MP KD++ W
Sbjct: 337 ITGYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWA 396
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A++S V N Y A RWF +M ++ RPN + S +LSA A+ A LNQG Q HA+ V M
Sbjct: 397 AVMSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNM 456
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
D ++ SLV++Y+KCG + +A+R+F+ I ++++ NSMI+ FAQ+GL E+A LF
Sbjct: 457 GWIFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLF 516
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M+ +G PN +TFL +L+AC GLV+ G+ YF+SM+++Y I+P P+HY CMVD+LGR
Sbjct: 517 NRMQYDGQRPNHVTFLGILTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVDLLGR 576
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA+++ NSM + P W ALL + H NLDLAKLAAQ L+E++P AT Y VL
Sbjct: 577 AGFLNEALEMTNSMPQKDYPDAWKALLSSSSLHSNLDLAKLAAQRLLEIDPYDATAYTVL 636
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
S+++S G K D V++ + KSPG S +I++DK
Sbjct: 637 SNMFSSAGMKEDEEMVKVAQLSNMASKSPGYS-LIIQDKT 675
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 239/488 (48%), Gaps = 54/488 (11%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NAL++ Y + GR ++A ++F+ M +DV++W +++ Y G + AR +FD MP +N
Sbjct: 45 NALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNAA 104
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH-GL 193
+W A+V Y++ LF A N+++ + R RE V+ +
Sbjct: 105 SWNALVSLYLRAGRPAAAHALFCK----APAKNAVSYGAIITGLARAGMLREAQAVYWEM 160
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
R+ D + N++I Y R G + A +VF M+ RD +SW++++ G G + EA
Sbjct: 161 PPRW---RDPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEA 217
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
RLFE MP ++ VSWT+MI G+ G Y
Sbjct: 218 RRLFEAMPERNVVSWTSMIRGYVKHG-------------------------------MYR 246
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+ F++M R+ V+ N +TLS VL A + +++GSQ+H +++M D+ + +SL+
Sbjct: 247 DGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLI 306
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+YS+ G++ DA +F+ +++++IVS+NS+I+G+ QN + E+A LF+ M ++ + I
Sbjct: 307 IMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHVLFKLMPEK----DAI 362
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
++ S++ + G + E F+ M I +A ++ L G+ A+
Sbjct: 363 SWTSMVVGFANRGWMRESVELFEQMPVKDEIA-----WAAVMSSLVANGNYVSAVRWFCQ 417
Query: 494 MTFE---PPPGVWGALLG--AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
M+ E P + LL A LN L A M DSA + L +Y+ G
Sbjct: 418 MSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAV-HASLVTMYAKCG 476
Query: 549 KKRDGNRV 556
+ + +RV
Sbjct: 477 RLAEAHRV 484
>gi|125560040|gb|EAZ05488.1| hypothetical protein OsI_27705 [Oryza sativa Indica Group]
Length = 1165
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 263/548 (47%), Positives = 366/548 (66%), Gaps = 1/548 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+NA+++ + A +F MP +NAVSY A+I+G + M +EAE +
Sbjct: 95 MPRRNAPSWNALLSVYLRAA-RPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELV 153
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y MP +WRD V SNAL++GYL+VG A R+FE M +DV++W +MVDG CK G V E
Sbjct: 154 YEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSE 213
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD MPE+NVV+WT+M+ GY+K DG LFL+MRR G+ N+ TL++ +AC
Sbjct: 214 ARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAA 273
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
REG+Q+H L+ GF+ DI LG+SII MY R G M +A + F M ++D VSWNSL
Sbjct: 274 ASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGCMVDAKRAFDCMQQKDIVSWNSL 333
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GYV + +EEA+ LF+ M KD VSWT+M+ GF+++G + +S+ELF MP KD+V WT
Sbjct: 334 ITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWT 393
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
AIIS F+ N Y A RWF M ++ +PN + S +LSA A+ A LNQG Q HA+ + M
Sbjct: 394 AIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINM 453
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
D ++ SLVS+Y+KCG + +AY +F++I ++++ NSMI+ F Q+G E+AL LF
Sbjct: 454 GWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLF 513
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KM++ G PN +TFL +L+ C G V++G+ YF+SM+ +Y +EP PEHY CMVD+LGR
Sbjct: 514 TKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGR 573
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG LAEA+++INSM W ALL A H NL AK+AAQ L+E +P AT Y VL
Sbjct: 574 AGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVL 633
Query: 541 SDLYSVIG 548
S ++S G
Sbjct: 634 SRMFSSAG 641
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 195/385 (50%), Gaps = 43/385 (11%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NAL++ Y + GR +A +F+ M +DV++W +++ Y G + AR +FD MP +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W A++ Y++ LF M A N+++ + + E V+
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMP----AKNAVSYGAIISGLAKAEMLHEAELVY--- 154
Query: 195 SRFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ + D + N+++ Y R+G + A +VF M+ RD +SW++++ G +G + EA
Sbjct: 155 EEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEA 214
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
R+F+ MP ++ VSWT+MI G+ +G + L
Sbjct: 215 RRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLL-------------------------- 248
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
F+ M R+ V+ N TLS L A AA + +G QIH ++ M E D+ + +S++
Sbjct: 249 -----FLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSII 303
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+YS+ G +VDA R F + +++IVS+NS+I+G+ Q+ + EEA LF+ M + + +
Sbjct: 304 IMYSRFGCMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQK----DAV 359
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSM 458
++ S++ + G + E F+ M
Sbjct: 360 SWTSMVVGFANRGWMRESVELFEQM 384
>gi|242080473|ref|XP_002445005.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
gi|241941355|gb|EES14500.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
Length = 679
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/580 (47%), Positives = 388/580 (66%), Gaps = 2/580 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R +AS+NA+++ + A +F P +NAVSY A+ITG R GM EA+ +
Sbjct: 98 MPLRNAASWNALVSLYLRAG-RPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAV 156
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y MP RWRD V SNA+I GYL+ G A R+F+ M +DV++W +MVDG CK G V E
Sbjct: 157 YWEMPPRWRDPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSE 216
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +F+ MPE+NVV+WT+M+ GY+K + DG LFL MRR G+ N ITL+++ + C +
Sbjct: 217 ARRLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQ 276
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
EG QVH L+ R GF DI LG+S+I MY R G M +A +FS M+++D VSWNSL
Sbjct: 277 ASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSL 336
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GYV N IE+A+ LF+ MP KD +SWT+M+ GF+++G + +S+ELF MP KD++ W
Sbjct: 337 ITGYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWA 396
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A++S V N Y A RWF +M ++ RPN + S +LSA A+ A LNQG Q HA+ V M
Sbjct: 397 AVMSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNM 456
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
D ++ SLV++Y+KCG + +A+R+F+ I ++++ NSMI+ FAQ+GL E+A LF
Sbjct: 457 GWIFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLF 516
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M+ +G PN +TFL +L+AC GLV+ G+ YF+SM+++Y I+P P+HY CMVD+LGR
Sbjct: 517 NRMQYDGQRPNHVTFLGILTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVDLLGR 576
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA+++ NSM + P W LL + H NLDLAKLAAQ L+E++P AT Y VL
Sbjct: 577 AGFLNEALEMTNSMPQKDYPDAWKVLLSSSSLHSNLDLAKLAAQRLLEIDPYDATAYTVL 636
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
S+++S G K D V++ + KSPG S +I++DK
Sbjct: 637 SNMFSSAGMKEDEEMVKVAQLSNMASKSPGYS-LIIQDKT 675
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 239/488 (48%), Gaps = 54/488 (11%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NAL++ Y + GR ++A ++F+ M +DV++W +++ Y G + AR +FD MP +N
Sbjct: 45 NALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNAA 104
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH-GL 193
+W A+V Y++ LF A N+++ + R RE V+ +
Sbjct: 105 SWNALVSLYLRAGRPAAAHALFCK----APAKNAVSYGAIITGLARAGMLREAQAVYWEM 160
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
R+ D + N++I Y R G + A +VF M+ RD +SW++++ G G + EA
Sbjct: 161 PPRW---RDPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEA 217
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
RLFE MP ++ VSWT+MI G+ G Y
Sbjct: 218 RRLFEAMPERNVVSWTSMIRGYVKHG-------------------------------MYR 246
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+ F++M R+ V+ N +TLS VL A + +++GSQ+H +++M D+ + +SL+
Sbjct: 247 DGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLI 306
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+YS+ G++ DA +F+ +++++IVS+NS+I+G+ QN + E+A LF+ M ++ + I
Sbjct: 307 IMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHVLFKLMPEK----DAI 362
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
++ S++ + G + E F+ M I +A ++ L G+ A+
Sbjct: 363 SWTSMVVGFANRGWMRESVELFEQMPVKDEIA-----WAAVMSSLVANGNYVSAVRWFCQ 417
Query: 494 MTFE---PPPGVWGALLG--AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
M+ E P + LL A LN L A M DSA + L +Y+ G
Sbjct: 418 MSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAV-HASLVTMYAKCG 476
Query: 549 KKRDGNRV 556
+ + +RV
Sbjct: 477 RLAEAHRV 484
>gi|413917533|gb|AFW57465.1| hypothetical protein ZEAMMB73_932577 [Zea mays]
Length = 677
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/579 (46%), Positives = 389/579 (67%), Gaps = 2/579 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+NA+++ + A +F P +NAVSY +ITG R GM EA+ +
Sbjct: 96 MPRRNAVSWNALLSLYLGAG-RPAAAHALFCKTPAKNAVSYGVIITGLARAGMLREAQAV 154
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y MP R RD V SNA+I GYL+ G + A R+F+ M +DV++W SMVDG CK G V E
Sbjct: 155 YGEMPPRLRDPVGSNAMILGYLRAGEIDMALRVFDTMAARDVISWSSMVDGLCKYGTVSE 214
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +F+ MPE+NVV+WT+MV GY+K + +G LFL MRR G+ N+ITL+++ + C +
Sbjct: 215 ARRLFEAMPERNVVSWTSMVRGYVKCGMYREGLLLFLDMRREGVQVNAITLSVVLDGCAQ 274
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
EG+QVH L++R GF DI L S+I MY R G+M +A +VF+ M ++D VSWNSL
Sbjct: 275 ASLVGEGIQVHCLMTRMGFVTDIFLDGSLIIMYSRFGWMVDARRVFAFMKQKDIVSWNSL 334
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GYV N IE+A+ LF+ MP +D +SWT+++ GF+++G + +S+ELF MP KDD+ WT
Sbjct: 335 ITGYVQNNMIEDAHVLFKLMPERDAISWTSVVVGFANRGWMRESVELFEQMPVKDDIAWT 394
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+IS F+ N + RWF +M ++ RPN S +LSA A+ A LNQG Q HA+ V M
Sbjct: 395 AVISSFIANGNHVSVVRWFCQMSQEGCRPNTAAFSCLLSALASLAMLNQGLQAHAYAVNM 454
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
D ++ SLV++Y+KCG + +A+R+F+ I ++V+ NSMIS FAQ+GL E+AL LF
Sbjct: 455 GWIFDSAVHASLVTMYAKCGRLAEAHRVFSCIRNPSLVAINSMISAFAQHGLAEDALKLF 514
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M+ +G PN +TFL +L+AC GLV++G+ YF+SM+++Y I+P P+HY CMV++LG
Sbjct: 515 NRMQYDGQRPNHVTFLGILTACARAGLVQQGYNYFESMRSVYGIQPNPDHYTCMVNLLGH 574
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA+++INSM + P W ALL + H NLDLAKLAAQ L+E++P T Y VL
Sbjct: 575 AGFLDEALEMINSMPQKDYPDAWAALLSSSSLHSNLDLAKLAAQRLLEIDPYDTTAYRVL 634
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
++++S G K D V++ + K PG S +I++DK
Sbjct: 635 TNMFSSAGLKGDEEMVKVAQLSNMASKRPGYS-LIIQDK 672
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 199/385 (51%), Gaps = 43/385 (11%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NAL++ Y + GR ++A ++F+ M +DV++W +++ Y + G AR +FD MP +N V
Sbjct: 43 NALLTSYGRRGRIQDAQQLFDRMPRRDVISWTALLTAYAEGGDFASARLVFDDMPRRNAV 102
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-L 193
+W A++ Y+ LF A N+++ ++ R RE V+G +
Sbjct: 103 SWNALLSLYLGAGRPAAAHALFCKTP----AKNAVSYGVIITGLARAGMLREAQAVYGEM 158
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
R D + N++I Y R G +D A +VF M+ RD +SW+S++ G G + EA
Sbjct: 159 PPRL---RDPVGSNAMILGYLRAGEIDMALRVFDTMAARDVISWSSMVDGLCKYGTVSEA 215
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
RLFE MP ++ VSWT+M+ G+ G Y
Sbjct: 216 RRLFEAMPERNVVSWTSMVRGYVKCG-------------------------------MYR 244
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
E F++M R+ V+ N +TLS VL A + + +G Q+H + +M +D+ + SL+
Sbjct: 245 EGLLLFLDMRREGVQVNAITLSVVLDGCAQASLVGEGIQVHCLMTRMGFVTDIFLDGSLI 304
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+YS+ G +VDA R+F + +++IVS+NS+I+G+ QN + E+A LF+ M + + I
Sbjct: 305 IMYSRFGWMVDARRVFAFMKQKDIVSWNSLITGYVQNNMIEDAHVLFKLMPER----DAI 360
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSM 458
++ SV+ + G + E F+ M
Sbjct: 361 SWTSVVVGFANRGWMRESVELFEQM 385
>gi|255575746|ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531775|gb|EEF33594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/643 (39%), Positives = 383/643 (59%), Gaps = 38/643 (5%)
Query: 1 MADRTSASYNAMITALINNNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
M +R + SYNA+++ L+ C + EA ++F MP RN VS+ +M+ G G EA+
Sbjct: 36 MPERNAVSYNALLSGLLQ--CGRLSEAMKLFEEMPERNVVSWTSMLCGLADAGKICEAKS 93
Query: 60 LYVNMPAR----W-------------------------RDSVCSNALISGYLKVGRCEEA 90
L+ MP R W +++ N +I+GY + GR EEA
Sbjct: 94 LFEEMPDRNVVSWNAMIVGLIRNGDLEAARMVFDESPVKNAASWNGMIAGYAENGRMEEA 153
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+F+ M +++V+ W SMV GYC+ G V E +F MP++N+V+WTAM+ G+ +E
Sbjct: 154 RALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIVSWTAMIGGFTWNGFYE 213
Query: 151 DGFDLFLSMRRGG-MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD---YDIILG 206
D LFL M+RG + N T L AC +R G Q+H + G D YD L
Sbjct: 214 DALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYDGRLS 273
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAV-SWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
+I MY +GFMD A+ +F+ S V S N +I+GY+ G +++A LF+ MP +D
Sbjct: 274 KGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMPVRDK 333
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
++WT+MI G+ GN+ ++ LF MPEKD V WT +ISG V NE + EA F EML +
Sbjct: 334 ITWTSMIDGYLVIGNVSEACSLFLYMPEKDAVAWTTMISGHVRNELFAEATYLFSEMLTQ 393
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
VRP T + + A+ A A+L+QG Q+HA + K ++D+ ++NSL+S+Y+KCG + +A
Sbjct: 394 GVRPLSSTYAILFGAAGAVASLDQGRQLHAMLTKTLSDNDLILENSLISMYAKCGEIRNA 453
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
YRIF+ + +++S+NSMI GF+ +GL EAL +F M D G PN +TFL VLSAC+H
Sbjct: 454 YRIFSQMISHDLISWNSMIMGFSHHGLANEALEVFEAMVDSGTHPNSVTFLGVLSACSHA 513
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GL+ +G+ F +M ++ ++PG EHY CMV++LGRAG L EA +LI + E +WGA
Sbjct: 514 GLINQGWEIFNAMSDVFAVQPGLEHYICMVNLLGRAGKLKEAEELILGLPLERNHAIWGA 573
Query: 506 LLGAGR-THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LLG + N D+AK AA ++EL+P +A +V+L ++Y+ G+ + +++R + LK
Sbjct: 574 LLGVCSFSEKNADIAKRAATRILELDPLNAPAHVLLCNIYAASGQHIEEHKLRKEMGLKG 633
Query: 565 IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGT 607
++K PGCSWI+L +VH+FL+G K L K++ L G+
Sbjct: 634 VKKVPGCSWIVLNGRVHVFLSGDKPRLQAKDMLSLLFQFGDGS 676
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 155/536 (28%), Positives = 239/536 (44%), Gaps = 98/536 (18%)
Query: 34 PMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARI 93
P+ V + ++++ + R G EA L+ MP R ++V NAL+SG L+ GR EA ++
Sbjct: 6 PLSRIVYWTSLLSKYSRSGFVDEARALFDIMPER--NAVSYNALLSGLLQCGRLSEAMKL 63
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
FE M E++VV+W SM+ G G++ EA+ +F++MP++NVV+W AM+ G ++ E
Sbjct: 64 FEEMPERNVVSWTSMLCGLADAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRNGDLE--- 120
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG----NSI 209
+R FD + N +
Sbjct: 121 ----------------------------------------AARMVFDESPVKNAASWNGM 140
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
I Y G M+EA +F M R+ ++W S++SGY GE+EE Y LF MP ++ VSWT
Sbjct: 141 IAGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIVSWT 200
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVR 328
MI GF TW +GF YE+A F+EM R D+
Sbjct: 201 AMIGGF----------------------TW----NGF-----YEDALLLFLEMKRGADIT 229
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES---DVSIQNSLVSLYSKCGNVVDA 385
PN T S+ A A G Q+HA ++ +++ D + L+ +YS G + A
Sbjct: 230 PNIETFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYDGRLSKGLICMYSSIGFMDYA 289
Query: 386 YRIFTNIDERNIV-SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
+ IF +V S N MI+G+ + GL ++A NLF M V ++IT+ S++
Sbjct: 290 HYIFNKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMP----VRDKITWTSMIDGYLV 345
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE---PPPG 501
+G V E F LY E + M+ R AEA L + M + P
Sbjct: 346 IGNVSEACSLF-----LYMPEKDAVAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSS 400
Query: 502 VWGALLGAGRTHLNLDLAK-LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
+ L GA +LD + L A L + L +Y+ G+ R+ R+
Sbjct: 401 TYAILFGAAGAVASLDQGRQLHAMLTKTLSDNDLILENSLISMYAKCGEIRNAYRI 456
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 111/201 (55%), Gaps = 12/201 (5%)
Query: 258 ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
+R P V WT++++ +S G ++++ LF++MPE++ V++ A++SG + + EA +
Sbjct: 3 KRSPLSRIVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMK 62
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F EM ++V ++ +S+L A + + + + N+ S N+++
Sbjct: 63 LFEEMPERNV----VSWTSMLCGLADAGKICEAKSLFEEMPDRNVVS----WNAMIVGLI 114
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
+ G++ A +F +N S+N MI+G+A+NG EEA LF +M+D N IT+ S
Sbjct: 115 RNGDLEAARMVFDESPVKNAASWNGMIAGYAENGRMEEARALFDEMEDR----NVITWTS 170
Query: 438 VLSACNHVGLVEEGFIYFKSM 458
++S G VEEG+ F++M
Sbjct: 171 MVSGYCRAGEVEEGYHLFRTM 191
>gi|225437951|ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Vitis vinifera]
Length = 743
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/594 (41%), Positives = 368/594 (61%), Gaps = 9/594 (1%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+ +++ L N I EA E+F MP RN VS+ +M+ G +R G EA +
Sbjct: 133 MPERNVVSWTSLLCGLANAG-RIGEARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRV 191
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP + V N +I+GY + R EEA +F+ M +++VV W SM+ GYC+ G V E
Sbjct: 192 FNEMPVK--SQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQE 249
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEACG 179
+F KMPE+NVV+WTAM+ G+ +++ LFL M+ M N T L AC
Sbjct: 250 GYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALLLFLEMKGNYDMKPNDETFISLAYACA 309
Query: 180 RFFRYREGVQVHG--LVSRFGFD-YDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAV 235
G+Q H +++ + +D YD L S+I MY GFMD A +F S +
Sbjct: 310 GIGFPHLGMQFHAHLIINCWDYDDYDGRLFKSLIHMYSMFGFMDFAWYIFFRNSMSYNTQ 369
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
S NS+I+GY+ G++E+A LF+ +P +D +SWT+MI G+ + G + K+ LFN MP++D
Sbjct: 370 SCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMPDRD 429
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V WT ++SG V NE + EA F EM K V P T S +L A+ A A L+QG Q H
Sbjct: 430 AVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHC 489
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
++K E D+ +QNSL+S+Y+KCG + DAY IF+ + R+++S+NSMI GF+ +GL E
Sbjct: 490 LLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHHGLTSE 549
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
AL +F M G PN +TFL +LSAC+H GL+ +G+ F +M ++ I+P EHY CMV
Sbjct: 550 ALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMV 609
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLG-AGRTHLNLDLAKLAAQHLMELEPDSA 534
++LGRAG + EA + I+ + FEP +WGALLG G +N +A+ AA+ L+EL+P +A
Sbjct: 610 NLLGRAGKVEEAEEFISKLPFEPDLTIWGALLGVCGFGMINTGVARRAAKRLLELDPLNA 669
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
+VVL ++++ IG++ + ++R + LK +RK PGCSWI+LK + ++FL+G +
Sbjct: 670 PAHVVLCNIHASIGQRAEEGQLRKEMGLKGVRKVPGCSWILLKGEPYVFLSGDR 723
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 154/511 (30%), Positives = 236/511 (46%), Gaps = 99/511 (19%)
Query: 25 EAFEIFATMPMRNA----VSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISG 80
EA + MP R V + ++++ F + G EA L+ MP R + V NA++SG
Sbjct: 59 EARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPER--NVVTYNAMLSG 116
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
Y++ GR +A R FE M E++VV+W S++ G GR+ EARE+F+ MPE+NVV+W +M+
Sbjct: 117 YVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVVSWNSML 176
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
G ++ E+ +F M V VS
Sbjct: 177 VGLIRSGQLEEARRVFNEM-----------------------------PVKSQVS----- 202
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
N +I Y M+EA +F M R+ V+W S+ISGY G ++E Y LF++M
Sbjct: 203 -----WNVMIAGYAEHSRMEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKM 257
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
P ++ VSWT MI GF+ W +GF Y+EA F+
Sbjct: 258 PERNVVSWTAMIGGFA----------------------W----NGF-----YKEALLLFL 286
Query: 321 EML-RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM----ESDVSIQNSLVSL 375
EM D++PN T S+ A A + G Q HAH++ +N + D + SL+ +
Sbjct: 287 EMKGNYDMKPNDETFISLAYACAGIGFPHLGMQFHAHLI-INCWDYDDYDGRLFKSLIHM 345
Query: 376 YSKCGNVVDAYRI-FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
YS G + A+ I F N N S NSMI+G+ + G E+A +LF D V ++I+
Sbjct: 346 YSMFGFMDFAWYIFFRNSMSYNTQSCNSMINGYIRIGQLEKAQSLF----DTIPVRDKIS 401
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS--LAEAIDLIN 492
+ S+++ +VG + + F +M P + A V + G + AEA L +
Sbjct: 402 WTSMINGYFNVGQIAKACYLFNNM-------PDRDAVAWTVMVSGHVQNELFAEATYLFS 454
Query: 493 SMTFE---PPPGVWGALLGAGRTHLNLDLAK 520
M + P + LLGA LD +
Sbjct: 455 EMRVKGVSPLNSTFSILLGAAGAMAYLDQGR 485
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/599 (38%), Positives = 362/599 (60%), Gaps = 27/599 (4%)
Query: 11 AMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
A+ + N C A +F +MP R+++S+ AMI+G + FY A +L+ MP RD
Sbjct: 55 AITNHMRNGQCD--SALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPT--RD 110
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
V N +ISG ++ A +F+ M E+DVV+W +M+ GY + G V EA+EIFD+MP
Sbjct: 111 LVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC 170
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLS------MRRGGMAFNSITLTILFEACGRFFRY 184
KN ++W M+ Y++ ED LF S + M + L +A G F R
Sbjct: 171 KNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRM 230
Query: 185 --REGVQVHGLVSRFGFD---------------YDIILGNSIITMYGRLGFMDEANKVFS 227
R+ V + ++S + + D+ ++++ Y + G +DEA +VF
Sbjct: 231 PERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFD 290
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
M ++++VSWN++I+GYV +++A LFE MP ++ SW TMITG++ G++ ++
Sbjct: 291 GMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNF 350
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ MP++D ++W AII+G+ + EEA F+EM R R N+ T +S LS A A L
Sbjct: 351 FDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 410
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
G Q+H VVK +ES + N+L+ +Y KCGN+ DAY +F I+E+ +VS+N+MI+G+
Sbjct: 411 ELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGY 470
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
A++G G+EAL LF MK G++P+ +T + VLSAC+H GLV++G YF SM Y I
Sbjct: 471 ARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITAN 530
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
+HY CM+D+LGRAG L +A +L+ +M FEP WGALLGA R H N +L + AA+ +
Sbjct: 531 SKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIF 590
Query: 528 ELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
E+EPD++ YV+LS+LY+ G+ D R+R++ + + ++K PG SW+ +++K+H F G
Sbjct: 591 EMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVG 649
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 141/265 (53%), Gaps = 12/265 (4%)
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
S D DI+ N IT + R G D A ++F+ M +R ++SWN++ISG + N + A
Sbjct: 40 TSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLA 99
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+LFE+MP +D VSW MI+G NL + LF+ MPE+D V+W A++SG+ N +
Sbjct: 100 RQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVK 159
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EA F EM K N ++ + +L+A + ++ + S N ++
Sbjct: 160 EAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDARRLFESKADWELIS----WNCMM 211
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
Y K +VDA IF + ER+ VS+N+MISG+AQNG EA LF +E V +
Sbjct: 212 GGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF----EESPVRDVF 267
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSM 458
T+ +++S G+++E F M
Sbjct: 268 TWTAMVSGYVQNGMLDEARRVFDGM 292
>gi|297846216|ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336831|gb|EFH67248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 792
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/601 (40%), Positives = 373/601 (62%), Gaps = 21/601 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
+ S+ M+TAL ++ S +A E+F MP RN VS+ ++TG +R G +A++++
Sbjct: 166 KNVVSWTVMLTALCDDGRS-DDAVELFDEMPERNVVSWNTLVTGLIRNGETEKAKQVFDA 224
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
MP+R D+V NA+I GY++ G EEA +FE M EK+VV W SMV GYC+ G V EA
Sbjct: 225 MPSR--DAVSWNAMIKGYIENGGMEEAKLLFENMSEKNVVTWTSMVYGYCRYGDVHEAYR 282
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG--GMAFNSITLTILFEACGRF 181
+F +MPE+NVV+WTAM+ G+ + + + LFL M++ ++ N TL L ACG
Sbjct: 283 LFCEMPERNVVSWTAMISGFAWNEFYREALMLFLEMKKDVDAISPNGETLISLAYACGGL 342
Query: 182 ---FRYREGVQVHGLVSRFGF---DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
FR R G Q+H V G+ D+D L S++ MY G + A + + D
Sbjct: 343 GVGFR-RLGEQLHAQVISNGWESVDHDGRLAKSLVHMYASFGLIASAQSLLN--ESFDLQ 399
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPG-KDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
S N +IS Y+ NG+ E A LF R+ D VSWT+MI G+ G++ ++ +LF + +K
Sbjct: 400 SCNIIISAYLKNGDFERAETLFRRVESLHDKVSWTSMIDGYLDAGDVSRAFDLFQKLHDK 459
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D VTWT +ISG V NE + EA +M+R ++P T S +LS++ AT+ L+QG +H
Sbjct: 460 DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHLH 519
Query: 355 AHVVKMNM--ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+ K + D+ +QNSLVS+Y+KCG + DAY IF+ + ++IVS+NS+I G + +GL
Sbjct: 520 CVIAKTTACYDPDLILQNSLVSMYAKCGAIDDAYEIFSKMVRKDIVSWNSVIIGLSHHGL 579
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
++AL LF++M D G+ PN +TFL VLSAC+H GL+ +G FK+MK Y+I+PG EHY
Sbjct: 580 ADKALKLFKEMLDSGMKPNSVTFLGVLSACSHSGLITKGLELFKAMKETYSIQPGVEHYI 639
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG----RTHLNLDLAKLAAQHLME 528
M+D+LGRAG L EA + I+++ F P V+GALLG R +A+ AA L+E
Sbjct: 640 SMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDRDAAGIAERAAMRLLE 699
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
L+P +A +V L ++Y+ +G+ +R + +K ++K+PGCSW+++ + ++FL+G K
Sbjct: 700 LDPVNAPGHVALCNMYAGLGRHEMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDK 759
Query: 589 S 589
S
Sbjct: 760 S 760
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 215/452 (47%), Gaps = 66/452 (14%)
Query: 115 KGRVIEAREIFDK-----------------------------------MPEKNVVAWTAM 139
+G ++ AR + DK MPE+N+V AM
Sbjct: 85 EGGLVHARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVMPERNIVTCNAM 144
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ GY+K + + LF M + N ++ T++ A R + V++ +
Sbjct: 145 LTGYVKCRRLNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSDDAVELFDEMP---- 195
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ +++ N+++T R G ++A +VF M RDAVSWN++I GY+ NG +EEA LFE
Sbjct: 196 ERNVVSWNTLVTGLIRNGETEKAKQVFDAMPSRDAVSWNAMIKGYIENGGMEEAKLLFEN 255
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
M K+ V+WT+M+ G+ G++ ++ LF MPE++ V+WTA+ISGF NE Y EA F
Sbjct: 256 MSEKNVVTWTSMVYGYCRYGDVHEAYRLFCEMPERNVVSWTAMISGFAWNEFYREALMLF 315
Query: 320 IEMLRKDV---RPNQLTLSSVLSASAATAT--LNQGSQIHAHVVKMNMES---DVSIQNS 371
+EM +KDV PN TL S+ A G Q+HA V+ ES D + S
Sbjct: 316 LEM-KKDVDAISPNGETLISLAYACGGLGVGFRRLGEQLHAQVISNGWESVDHDGRLAKS 374
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
LV +Y+ G + A + + ++ S N +IS + +NG E A LFR+++ + +
Sbjct: 375 LVHMYASFGLIASAQSLLN--ESFDLQSCNIIISAYLKNGDFERAETLFRRVES---LHD 429
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
++++ S++ G V F F+ + + + M+ L + AEA L+
Sbjct: 430 KVSWTSMIDGYLDAGDVSRAFDLFQKLHDKDGVT-----WTVMISGLVQNELFAEAASLL 484
Query: 492 NSMT---FEPPPGVWGALLGAGRTHLNLDLAK 520
+ M +P + LL + NLD K
Sbjct: 485 SDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 516
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 18/273 (6%)
Query: 183 RYREGVQVHGL-----VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
R EG VH + + G +I S++T Y + G++DEA +F +M +R+ V+
Sbjct: 82 RLSEGGLVHARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVMPERNIVTC 141
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N++++GYV + EA+ LF MP K+ VSWT M+T G + ++ELF+ MPE++ V
Sbjct: 142 NAMLTGYVKCRRLNEAWTLFREMP-KNVVSWTVMLTALCDDGRSDDAVELFDEMPERNVV 200
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W +++G + N + E+A + F M +D +V + + G A +
Sbjct: 201 SWNTLVTGLIRNGETEKAKQVFDAMPSRD---------AVSWNAMIKGYIENGGMEEAKL 251
Query: 358 VKMNM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+ NM E +V S+V Y + G+V +AYR+F + ERN+VS+ +MISGFA N EA
Sbjct: 252 LFENMSEKNVVTWTSMVYGYCRYGDVHEAYRLFCEMPERNVVSWTAMISGFAWNEFYREA 311
Query: 417 LNLFRKMKD--EGLVPNQITFLSVLSACNHVGL 447
L LF +MK + + PN T +S+ AC +G+
Sbjct: 312 LMLFLEMKKDVDAISPNGETLISLAYACGGLGV 344
>gi|224126355|ref|XP_002329533.1| predicted protein [Populus trichocarpa]
gi|222870242|gb|EEF07373.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/594 (39%), Positives = 357/594 (60%), Gaps = 9/594 (1%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+ +M+ L + I EA E+F MP RN VS+ AM+ G ++ EA +
Sbjct: 90 MPERNVVSWTSMLCGLADAG-RICEARELFKEMPERNVVSWNAMVAGLIKNEDLEEARRV 148
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ +P + + V NA+I G+ + G+ EEA +FE M +++V+ W +M+ GYC+ G V E
Sbjct: 149 FDEIPEK--NVVSWNAMIKGFAENGKMEEARVLFEEMEDRNVITWTTMIAGYCRIGDVRE 206
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACG 179
A F ++PE+NVV+WTAM+ G+ + + LFL M RR +A N T L AC
Sbjct: 207 AYCFFCRIPERNVVSWTAMISGFTWNGYYGEALLLFLEMKRRSNIAPNGETFISLAYACA 266
Query: 180 RFFRYREGVQVHGLVSRFGF---DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV- 235
+ G Q+H + G DYD + S+I MY G MD A+ VF+ AV
Sbjct: 267 GMRFHHLGKQLHAQLIINGLEYEDYDGRIAKSLIHMYSLFGAMDYAHYVFNKNLNSHAVQ 326
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
S N +I+GY G++E+A LF+ +P +D ++WT+MI G+ GN+ ++ LF MP+KD
Sbjct: 327 SCNHMINGYTRIGQVEKARELFDTIPARDNITWTSMIVGYFDIGNVSEACYLFENMPDKD 386
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V WT++ISG V NE + +A + + ML P T + + A+ A A L+ G Q+H
Sbjct: 387 SVAWTSMISGLVQNELFLKATSFLLRMLAHGAPPLSSTYAILFGAAGAIAHLDFGRQLHN 446
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
++K + D+ + NSL+S+Y+KCG + DAY IFTN+ R+++S+N+MI G A + L E
Sbjct: 447 MLMKTLSDCDLILSNSLISMYAKCGEIHDAYSIFTNMIYRDLISWNTMIMGLAHHALANE 506
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
L +F M G PN +TFL +LSAC+H GLV +G FK+M+ +Y I+PG EHY M+
Sbjct: 507 TLKVFETMLQSGTRPNSVTFLGILSACSHAGLVSQGCKLFKAMRDVYAIQPGLEHYISMI 566
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLG-AGRTHLNLDLAKLAAQHLMELEPDSA 534
++LGRAG + EA +LI + FE +WGALLG G N D+A+ AA+ L+EL+P +A
Sbjct: 567 NLLGRAGKVREAEELILGLPFETNHAIWGALLGVCGVAEKNADIAQHAARRLLELDPLNA 626
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
+V L ++Y+ GK + ++R + LK +RK PGCSWI+L V +FL+G K
Sbjct: 627 PAHVALCNIYAACGKHIEEQKLRKEMGLKGVRKVPGCSWIVLNGNVCVFLSGDK 680
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 149/525 (28%), Positives = 242/525 (46%), Gaps = 96/525 (18%)
Query: 41 YAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK 100
+ +++T + R G E+ L+ MP R + V N ++SGYL+ GR EA +FE M E+
Sbjct: 36 WTSLLTKYSRIGFIDESRVLFDIMPER--NIVSYNVMLSGYLQCGRLSEARGLFEEMPER 93
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
+VV+W SM+ G GR+ EARE+F +MPE+NVV+W AMV G +K + E+ R
Sbjct: 94 NVVSWTSMLCGLADAGRICEARELFKEMPERNVVSWNAMVAGLIKNEDLEEA-------R 146
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
R F+ I + +++ N++I + G M+
Sbjct: 147 R---VFDEIP-----------------------------EKNVVSWNAMIKGFAENGKME 174
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
EA +F M R+ ++W ++I+GY G++ EAY F R+P ++ VSWT MI+GF
Sbjct: 175 EARVLFEEMEDRNVITWTTMIAGYCRIGDVREAYCFFCRIPERNVVSWTAMISGF----- 229
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLS 339
TW N Y EA F+EM R+ ++ PN T S+
Sbjct: 230 -----------------TW---------NGYYGEALLLFLEMKRRSNIAPNGETFISLAY 263
Query: 340 ASAATATLNQGSQIHAHVVKMNME---SDVSIQNSLVSLYSKCGNVVDAYRIFT-NIDER 395
A A + G Q+HA ++ +E D I SL+ +YS G + A+ +F N++
Sbjct: 264 ACAGMRFHHLGKQLHAQLIINGLEYEDYDGRIAKSLIHMYSLFGAMDYAHYVFNKNLNSH 323
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ S N MI+G+ + G E+A LF D + IT+ S++ +G V E F
Sbjct: 324 AVQSCNHMINGYTRIGQVEKARELF----DTIPARDNITWTSMIVGYFDIGNVSEACYLF 379
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID-LINSMTFEPPP--GVWGALLGAGRT 512
++M ++ + M+ L + +A L+ + PP + L GA
Sbjct: 380 ENMPDKDSVA-----WTSMISGLVQNELFLKATSFLLRMLAHGAPPLSSTYAILFGAAGA 434
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSD----LYSVIGKKRDG 553
+LD + LM+ D ++LS+ +Y+ G+ D
Sbjct: 435 IAHLDFGRQLHNMLMKTLSDCD---LILSNSLISMYAKCGEIHDA 476
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
S ++ SL++ YS+ G + ++ +F + ERNIVSYN M+SG+ Q G EA LF +
Sbjct: 30 HSRIAHWTSLLTKYSRIGFIDESRVLFDIMPERNIVSYNVMLSGYLQCGRLSEARGLFEE 89
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
M + N +++ S+L G + E FK M
Sbjct: 90 MPER----NVVSWTSMLCGLADAGRICEARELFKEM 121
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/609 (40%), Positives = 365/609 (59%), Gaps = 48/609 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N I+ LI N I EA +F MP RN V++ +MITG+VRR +A +L+ MP R
Sbjct: 71 NKRISHLIRNG-RINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMPDR-- 127
Query: 70 DSVCSNALISGYLKV-GR-CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
D V N +ISGY+ GR EE +F+ M E+D V+W +M+ GY + GR+ EA ++FD
Sbjct: 128 DVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDS 187
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR----------GGMAFNS-------IT 170
M E+NVV+W AMV G+++ E + F+ M G+ N I
Sbjct: 188 MQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRIL 247
Query: 171 LT----------------ILFEACGRFFRYREGVQVHGLVSRFG--------FDYDIILG 206
LT IL G+ R + Q+ + + F+ +++
Sbjct: 248 LTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSW 307
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
NS+I Y + + A +F M +RD +SWN++ISGYV ++EEA+ LF+ MP D +
Sbjct: 308 NSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTL 367
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+W +MI+GF+ KGNLE + LF +P+K+ V+W ++I+G+ NN Y+ A + +ML +
Sbjct: 368 TWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQG 427
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+P++ TLSSVLS + A L+ G QIH + K + D+ I NSL+++YS+CG +V+A
Sbjct: 428 EKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVI-PDIPINNSLITMYSRCGAIVEAR 486
Query: 387 RIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
IF + ++ ++S+N+MI G+A +G +AL LF MK + P ITF+SVL+AC H
Sbjct: 487 TIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHA 546
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
G V+EG ++FKSM + IEP EH+A +VDI+GR G L EA+DLINSM FEP VWGA
Sbjct: 547 GFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGA 606
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA R H N++LA++AA+ LM+LEP+S+ PYV+L ++Y+ +G+ + +RM + I
Sbjct: 607 LLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNI 666
Query: 566 RKSPGCSWI 574
RK PG SW+
Sbjct: 667 RKQPGYSWV 675
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 230/490 (46%), Gaps = 90/490 (18%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N IS ++ GR EA +F+AM ++++V W SM+ GY ++ + +AR++FD+MP
Sbjct: 66 DLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMP 125
Query: 130 EKNVVAWTAMVDGYMKVDC----FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+++VV+W M+ GY V C E+G LF M
Sbjct: 126 DRDVVSWNLMISGY--VSCQGRWVEEGRHLFDEMP------------------------- 158
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+ D + N++I+ Y R G MDEA ++F M +R+ VSWN++++G++
Sbjct: 159 --------------ERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFL 204
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD------VTW 299
NG++E A F RMP +D S + ++ G G L+++ + +DD +
Sbjct: 205 QNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAY 264
Query: 300 TAIISGFVNNEQYEEAFRWFIEML-------------RKDVRPNQLTLSSVLSASAATA- 345
+++G+ N + ++A + F ++ R V N + + V + +A
Sbjct: 265 NILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSAR 324
Query: 346 ----------TLNQGSQIHAHVVKMNMES-----------DVSIQNSLVSLYSKCGNVVD 384
T++ + I +V +ME D NS++S +++ GN+
Sbjct: 325 VLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLEL 384
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A +F I ++N+VS+NSMI+G+ NG + A L+R+M +G P++ T SVLS C+
Sbjct: 385 ARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSG 444
Query: 445 VGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
+ G I+ + KT+ P ++ + R G++ EA + + + + W
Sbjct: 445 FAALHLGMQIHQQITKTVI---PDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISW 501
Query: 504 GALLGAGRTH 513
A++G H
Sbjct: 502 NAMIGGYAFH 511
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/523 (23%), Positives = 225/523 (43%), Gaps = 135/523 (25%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+NAM+T + N + A E F MP R++ S +A++ G ++ G EA+ +
Sbjct: 188 MQERNVVSWNAMVTGFLQNG-DVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRI 246
Query: 61 YVNMPARWRDS------VCSNALISGYLKVGRCEEAARIFEAM------------VEKDV 102
+ +R +D N L++GY + GR ++A ++F+ + E++V
Sbjct: 247 LLT--SRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNV 304
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
V+W SM+ Y K + AR +FD+M E++ ++W M+ GY+++ E+ + LF M
Sbjct: 305 VSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMP-- 362
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
N TLT NS+I+ + + G ++ A
Sbjct: 363 ----NPDTLT---------------------------------WNSMISGFAQKGNLELA 385
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSW-------- 268
+F+ + +++ VSWNS+I+GY +NG+ + A L+ +M P + +S
Sbjct: 386 RALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGF 445
Query: 269 ------------------------TTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAII 303
++IT +S G + ++ +F+ + +K+ ++W A+I
Sbjct: 446 AALHLGMQIHQQITKTVIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMI 505
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
G+ + +A F M R VRP +T SVL+A A + +G H M E
Sbjct: 506 GGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEG---RMHFKSMACE 562
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ E I + S++ ++G EEA++L M
Sbjct: 563 FGI---------------------------EPRIEHFASLVDIVGRHGQLEEAMDLINSM 595
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
E P++ + ++L AC VE + + + L +EP
Sbjct: 596 PFE---PDKAVWGALLGACRVHNNVELARV---AAEALMKLEP 632
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/558 (38%), Positives = 346/558 (62%), Gaps = 41/558 (7%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCE 88
+F MP R+ VS+ AM++G+ + G EA+E++ MP + +S+ N +++ Y++ GR E
Sbjct: 52 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK--NSISWNGMLAAYVQNGRIE 109
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
+A R+FE+ + ++++W M+ GY K+ R+++AR IFD+MPE++ V+W M+ GY +
Sbjct: 110 DARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQ--- 166
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
+L + R LFE D+ +
Sbjct: 167 ---NGELLEAQR-------------LFEESPV--------------------RDVFTWTA 190
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSW 268
+++ Y + G +DEA +VF M ++++VSWN++I+GYV +++A LFE MP ++ SW
Sbjct: 191 MVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSW 250
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
TMITG++ G++ ++ F+ MP++D ++W AII+G+ + EEA F+EM R R
Sbjct: 251 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 310
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
N+ T +S LS A A L G Q+H VVK +ES + N+L+ +Y KCGN+ DAY +
Sbjct: 311 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 370
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F I+E+ +VS+N+MI+G+A++G G+EAL LF MK G++P+ +T + VLSAC+H GLV
Sbjct: 371 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 430
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
++G YF SM Y I +HY CM+D+LGRAG L +A +L+ +M FEP WGALLG
Sbjct: 431 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 490
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R H N +L + AA+ + E+EPD++ YV+LS+LY+ G+ D R+R++ + + ++K
Sbjct: 491 ASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKV 550
Query: 569 PGCSWIILKDKVHLFLAG 586
PG SW+ +++K+H F G
Sbjct: 551 PGYSWVEVQNKIHTFTVG 568
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 209/407 (51%), Gaps = 18/407 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N MI+ N + EA +F P+R+ ++ AM++G+V+ GM EA +
Sbjct: 149 MPERDEVSWNTMISGYAQNG-ELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRV 207
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP ++SV NA+I+GY++ R ++A +FEAM ++V +W +M+ GY + G + +
Sbjct: 208 FDGMPE--KNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQ 265
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR FD+MP+++ ++W A++ GY + E+ LF+ M+R G N T T C
Sbjct: 266 ARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAE 325
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G QVHG V + G + +GN+++ MY + G +D+A VF + +++ VSWN++
Sbjct: 326 IAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTM 385
Query: 241 ISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I+GY +G +EA LFE M D V+ +++ S G ++K E F M +
Sbjct: 386 IAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYG 445
Query: 297 VT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+T +T +I + ++A M P+ T ++L AS G
Sbjct: 446 ITANSKHYTCMIDLLGRAGRLDDAQNLMKNM---PFEPDAATWGALLGASRIHGNTELGE 502
Query: 352 QIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRIFTNIDERNI 397
+ A + ME D S L+S LY+ G D R+ + +R +
Sbjct: 503 K--AAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGV 547
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/647 (36%), Positives = 370/647 (57%), Gaps = 72/647 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+N+MI A ++N+ + EA ++F MP R+ S+ MIT + R G +A L
Sbjct: 72 MPQRNIVSWNSMIAAYLHND-RVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNL 130
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM----------------------- 97
+ +P +W + VC NA+++GY K + +EA R+F+AM
Sbjct: 131 FNLLPYKW-NPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRL 189
Query: 98 --------VEKDVVAWGSMVDGY-------------------------------CKKGRV 118
E+DVV+W MVDG+ + G++
Sbjct: 190 GLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKI 249
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EAR +FD+MP +NVVAW AM+ Y++ ++ LF+ M NSI+ T +
Sbjct: 250 AEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK----NSISWTTVINGY 305
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
R + E Q L+++ + ++ ++I+ Y + MD+A ++F+ +S RD V WN
Sbjct: 306 VRMGKLDEARQ---LLNQMPYR-NVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWN 361
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
++I+GY G ++EA LF++M KD VSW TM+ ++ G ++ +I++F M EK+ V+
Sbjct: 362 TMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVS 421
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W ++ISG N Y +A + F+ M + +P+Q T + LS+ A A L G Q+H V+
Sbjct: 422 WNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVM 481
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K +D+ + N+L+++Y+KCG++ A +F +ID ++VS+NS+I+ +A NG G EAL
Sbjct: 482 KSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALK 541
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF KM+ EG+ P+++TF+ +LSAC+HVGL+++G FK M YNIEP EHYACMVD+L
Sbjct: 542 LFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLL 601
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L EA L+ M G+WGALLGA R H NL+LAK AA+ L+E EP + YV
Sbjct: 602 GRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYV 661
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+LS++ + G+ + RVR K K K PG SWI L+++VH FL+
Sbjct: 662 LLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLS 708
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 166/568 (29%), Positives = 280/568 (49%), Gaps = 97/568 (17%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA 104
IT + G EA +++ +M + ++V N++IS + K GR +A ++F+ M ++++V+
Sbjct: 22 ITQLGKSGQIDEAIKVFQHMTHK--NTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVS 79
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT--------------------------- 137
W SM+ Y RV EAR++FDKMP +++ +WT
Sbjct: 80 WNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWN 139
Query: 138 -----AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ--- 189
AMV GY K F++ LF +M A + ++ + R R G+Q
Sbjct: 140 PVCCNAMVAGYAKNRQFDEARRLFDAMP----AKDLVSWNSMLTGYTRNGEMRLGLQFFE 195
Query: 190 -------------VHGLV------SRFGFDYDIILGNSI--ITM---YGRLGFMDEANKV 225
V G V S + F I N++ +TM + R G + EA ++
Sbjct: 196 EMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRL 255
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSI 285
F M R+ V+WN++I+ YV N ++EA LF MP K+ +SWTT+I G+ G L+++
Sbjct: 256 FDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEAR 315
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+L N MP ++ TA+ISG+V N++ ++A + F NQ+++ V+ + A
Sbjct: 316 QLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIF----------NQISIRDVVCWNTMIA 365
Query: 346 TLNQGSQIHA--HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+Q ++ H+ K ++ D+ N++V+ Y++ G + A +IF + E+NIVS+NS+
Sbjct: 366 GYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSL 425
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLY 462
ISG QNG +AL F M EG P+Q TF LS+C H+ ++ G ++ MK+ Y
Sbjct: 426 ISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGY 485
Query: 463 NIEPGPEHYACMVDILGRAGSLAEA------IDLINSMTFEPPPGVWGALLGAGRTHLNL 516
+ + ++ + + GS++ A ID + +++ + AL G GR L L
Sbjct: 486 ATDLFVSN--ALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAY-ALNGNGREALKL 542
Query: 517 DLAKLAAQHLMELE---PDSATPYVVLS 541
H ME+E PD T +LS
Sbjct: 543 F-------HKMEVEGVAPDEVTFVGILS 563
>gi|18398422|ref|NP_564401.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806407|sp|P0C7R0.1|PPR69_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g32415, mitochondrial; Flags: Precursor
gi|332193363|gb|AEE31484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/601 (40%), Positives = 371/601 (61%), Gaps = 21/601 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
+ S+ M+TAL ++ S +A E+F MP RN VS+ ++TG +R G +A++++
Sbjct: 136 KNVVSWTVMLTALCDDGRS-EDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDA 194
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
MP+R D V NA+I GY++ EEA +F M EK+VV W SMV GYC+ G V EA
Sbjct: 195 MPSR--DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYR 252
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG--GMAFNSITLTILFEACGRF 181
+F +MPE+N+V+WTAM+ G+ + + + LFL M++ ++ N TL L ACG
Sbjct: 253 LFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGL 312
Query: 182 ---FRYREGVQVHGLVSRFGF---DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
FR R G Q+H V G+ D+D L S++ MY G + A + + D
Sbjct: 313 GVEFR-RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQ 369
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPG-KDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
S N +I+ Y+ NG++E A LFER+ D VSWT+MI G+ G++ ++ LF + +K
Sbjct: 370 SCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK 429
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D VTWT +ISG V NE + EA +M+R ++P T S +LS++ AT+ L+QG IH
Sbjct: 430 DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH 489
Query: 355 AHVVKMNM--ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+ K + D+ +QNSLVS+Y+KCG + DAY IF + +++ VS+NSMI G + +GL
Sbjct: 490 CVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGL 549
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
++ALNLF++M D G PN +TFL VLSAC+H GL+ G FK+MK Y+I+PG +HY
Sbjct: 550 ADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI 609
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG-AGRTHLNLD---LAKLAAQHLME 528
M+D+LGRAG L EA + I+++ F P V+GALLG G + D +A+ AA L+E
Sbjct: 610 SMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLE 669
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
L+P +A +V L ++Y+ +G+ +R + +K ++K+PGCSW+++ + ++FL+G K
Sbjct: 670 LDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDK 729
Query: 589 S 589
S
Sbjct: 730 S 730
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 229/513 (44%), Gaps = 99/513 (19%)
Query: 23 IYEAFEIFATMPMRNAVS----YAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI 78
+ A + +P R +++ + ++++ + + G EA L+ MP R + V NA++
Sbjct: 58 LVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER--NIVTCNAML 115
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+GY+K R EA +F M K+VV+W M+ C GR +A E+FD+MPE+NVV+W
Sbjct: 116 TGYVKCRRMNEAWTLFREM-PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNT 174
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+V G ++ E +F +M SR
Sbjct: 175 LVTGLIRNGDMEKAKQVFDAMP----------------------------------SR-- 198
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
D++ N++I Y M+EA +F MS+++ V+W S++ GY G++ EAYRLF
Sbjct: 199 ---DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFC 255
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
MP ++ VSWT MI+GF+ W NE Y EA
Sbjct: 256 EMPERNIVSWTAMISGFA----------------------W---------NELYREALML 284
Query: 319 FIEMLRKD---VRPNQLTLSSVLSASAATAT--LNQGSQIHAHVVKMNMES---DVSIQN 370
F+EM +KD V PN TL S+ A G Q+HA V+ E+ D +
Sbjct: 285 FLEM-KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAK 343
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SLV +Y+ G + A + + ++ S N +I+ + +NG E A LF ++K +
Sbjct: 344 SLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFERVKS---LH 398
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+++++ S++ G V F F+ + + + M+ L + AEA L
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----WTVMISGLVQNELFAEAASL 453
Query: 491 INSMT---FEPPPGVWGALLGAGRTHLNLDLAK 520
++ M +P + LL + NLD K
Sbjct: 454 LSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 148/272 (54%), Gaps = 16/272 (5%)
Query: 183 RYREGVQVHGL-----VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
R EG VH + + G ++ S+++ Y + G++DEA +F +M +R+ V+
Sbjct: 52 RLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTC 111
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N++++GYV + EA+ LF MP K+ VSWT M+T G E ++ELF+ MPE++ V
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV 170
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W +++G + N E+A + F M +DV + + N G + +
Sbjct: 171 SWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIE--------NDGMEEAKLL 222
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
E +V S+V Y + G+V +AYR+F + ERNIVS+ +MISGFA N L EAL
Sbjct: 223 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREAL 282
Query: 418 NLFRKMKD--EGLVPNQITFLSVLSACNHVGL 447
LF +MK + + PN T +S+ AC +G+
Sbjct: 283 MLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/666 (36%), Positives = 385/666 (57%), Gaps = 75/666 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+N+MI ++N + +A +F M R+ S+ MIT + R G +A EL
Sbjct: 72 MPQRNLVSWNSMIAGYLHNEL-VEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKAREL 130
Query: 61 YVNMPARWRDSVCSNALI-------------------------------SGYLKVGRCEE 89
+ +P + +D+VC NALI SGY K G+ +
Sbjct: 131 FNLLPDK-QDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQL 189
Query: 90 AARIFEAMVEKDVVAWGSMVDGYC------------KK-------------------GRV 118
+ FEAM E++VV+W MVDGY KK GR+
Sbjct: 190 GLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRM 249
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EAR +F++MP KN+V+W AM+ Y++ + +D + LF+ M +S++ T +
Sbjct: 250 TEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEK----DSVSWTAMING- 304
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ R + +Q +++ + +I ++I Y + G MDEAN++FS +S RD+V WN
Sbjct: 305 --YVRVGKLLQAREILNLMPYK-NIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWN 361
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
S+I+GY H G +EA RLF+ M KD VSW TMI ++ G ++K++E+FN M E++ V+
Sbjct: 362 SMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVS 421
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W ++I+G+V N Y EA FI M ++ +P+Q T+ L ASA A LN G Q+H +
Sbjct: 422 WNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTI 481
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K +D+ ++N+++++Y+K G V +A +F I +++VS+NS+I+G+A NG G+EA+
Sbjct: 482 KTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVE 541
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF M G++P+++TF +LSACNH G V++G FKSM Y+I+P EHYAC++++L
Sbjct: 542 LFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLL 601
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR G L EA++++ M +WGALL A R H NL+LAK +A+ L+ LEP +A+ YV
Sbjct: 602 GRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYV 661
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLK-EIE 597
+LS++++ G+ RVR+ K + K PGCSWI + +++H FL+ K+ DL+ EI
Sbjct: 662 LLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCFLS--KAPPDLRPEIC 719
Query: 598 VTLQTI 603
L+T+
Sbjct: 720 NILKTV 725
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 239/473 (50%), Gaps = 68/473 (14%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA 104
I+ R G EA +++ M R + V N++IS Y K GR A +F+ M ++++V+
Sbjct: 22 ISQLGRSGRIEEAVAVFLQMTER--NIVTYNSMISAYAKNGRIANARELFDLMPQRNLVS 79
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF--LSMRRG 162
W SM+ GY V +A +FD+M ++++ +WT M+ Y ++ E +LF L ++
Sbjct: 80 WNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQD 139
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
+ N++ I A R FR + + LV +++ NSI++ Y + G M
Sbjct: 140 TVCRNAL---IAGYAKKRLFREAKKLFDEMLVK------NVVSWNSILSGYTKNGKMQLG 190
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
+ F M +R+ VSWN ++ GYV G+++ A+ F+++P + VSW TM++GF+ G +
Sbjct: 191 LQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMT 250
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-----------VRPNQ 331
++ LFN MP K+ V+W A+I +V Q ++A++ F+EM KD VR +
Sbjct: 251 EARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGK 310
Query: 332 LTLS-SVLSASAATATLNQGSQIHAHVVKMNME------SDVSIQ-----NSLVSLYSKC 379
L + +L+ Q + I+ ++ M+ S +S++ NS+++ Y+ C
Sbjct: 311 LLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHC 370
Query: 380 GNVVDAYRI-------------------------------FTNIDERNIVSYNSMISGFA 408
G +A R+ F + ERN+VS+NS+I+G+
Sbjct: 371 GRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYV 430
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT 460
QNGL EALN F MK +G P+Q T + L A ++ + G ++ ++KT
Sbjct: 431 QNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKT 483
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 176/329 (53%), Gaps = 22/329 (6%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + GR R E V V ++ + +I+ NS+I+ Y + G + A ++F +M
Sbjct: 17 TQNLRISQLGRSGRIEEAVAVFLQMT----ERNIVTYNSMISAYAKNGRIANARELFDLM 72
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
+R+ VSWNS+I+GY+HN +E+A RLF+RM +D SWT MIT ++ G LEK+ ELFN
Sbjct: 73 PQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFN 132
Query: 290 MMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
++P+K D V A+I+G+ + EA + F EML K+V ++ +S+LS +
Sbjct: 133 LLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNV----VSWNSILSGYTKNGKMQ 188
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G Q + + N+ S N +V Y G++ A+ F I N+VS+ +M+SGFA
Sbjct: 189 LGLQFFEAMGERNVVS----WNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFA 244
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
G EA NLF +M + LV ++ +++ A +++ + F M E
Sbjct: 245 HYGRMTEARNLFNEMPTKNLV----SWNAMIGAYVRENQIDDAYKLFMEMP-----EKDS 295
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFE 497
+ M++ R G L +A +++N M ++
Sbjct: 296 VSWTAMINGYVRVGKLLQAREILNLMPYK 324
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
S V QN +S + G + +A +F + ERNIV+YNSMIS +A+NG A LF M
Sbjct: 13 SYVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLM 72
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM--KTLYNIEPGPEHYACMVDILGRA 481
LV ++ S+++ H LVE+ F M + +Y+ + M+ R
Sbjct: 73 PQRNLV----SWNSMIAGYLHNELVEDAARLFDRMFKRDIYS-------WTLMITCYTRI 121
Query: 482 GSLAEAIDLIN 492
G L +A +L N
Sbjct: 122 GELEKARELFN 132
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/666 (36%), Positives = 385/666 (57%), Gaps = 75/666 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+N+MI ++N + +A +F M R+ S+ MIT + R G +A EL
Sbjct: 72 MPQRNLVSWNSMIAGYLHNEL-VEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKAREL 130
Query: 61 YVNMPARWRDSVCSNALI-------------------------------SGYLKVGRCEE 89
+ +P + +D+VC NALI SGY K G+ +
Sbjct: 131 FNLLPDK-QDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQL 189
Query: 90 AARIFEAMVEKDVVAWGSMVDGYC------------KK-------------------GRV 118
+ FEAM E++VV+W MVDGY KK GR+
Sbjct: 190 GLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRM 249
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EAR +F++MP KN+V+W AM+ Y++ + +D + LF+ M +S++ T +
Sbjct: 250 TEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEK----DSVSWTAMING- 304
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ R + +Q +++ + +I ++I Y + G MDEAN++FS +S RD+V WN
Sbjct: 305 --YVRVGKLLQAREILNLMPYK-NIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWN 361
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
S+I+GY H G +EA RLF+ M KD VSW TMI ++ G ++K++E+FN M E++ V+
Sbjct: 362 SMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVS 421
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W ++I+G+V N Y EA FI M ++ +P+Q T+ L ASA A LN G Q+H +
Sbjct: 422 WNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTI 481
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K +D+ ++N+++++Y+K G V +A +F I +++VS+NS+I+G+A NG G+EA+
Sbjct: 482 KTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVE 541
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF M G++P+++TF +LSACNH G V++G FKSM Y+I+P EHYAC++++L
Sbjct: 542 LFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLL 601
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR G L EA++++ M +WGALL A R H NL+LAK +A+ L+ LEP +A+ YV
Sbjct: 602 GRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYV 661
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLK-EIE 597
+LS++++ G+ RVR+ K + K PGCSWI + +++H FL+ K+ DL+ EI
Sbjct: 662 LLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCFLS--KAPPDLRPEIC 719
Query: 598 VTLQTI 603
L+T+
Sbjct: 720 NILKTV 725
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 239/473 (50%), Gaps = 68/473 (14%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA 104
I+ R G EA +++ M R + V N++IS Y K GR A +F+ M ++++V+
Sbjct: 22 ISQLGRSGRIEEAVAVFLKMTER--NIVTYNSMISAYAKNGRIANARELFDLMPQRNLVS 79
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF--LSMRRG 162
W SM+ GY V +A +FD+M ++++ +WT M+ Y ++ E +LF L ++
Sbjct: 80 WNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQD 139
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
+ N++ I A R FR + + LV +++ NSI++ Y + G M
Sbjct: 140 TVCRNAL---IAGYAKKRLFREAKKLFDEMLVK------NVVSWNSILSGYTKNGKMQLG 190
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
+ F M +R+ VSWN ++ GYV G+++ A+ F+++P + VSW TM++GF+ G +
Sbjct: 191 LQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMT 250
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-----------VRPNQ 331
++ LFN MP K+ V+W A+I +V Q ++A++ F+EM KD VR +
Sbjct: 251 EARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGK 310
Query: 332 LTLS-SVLSASAATATLNQGSQIHAHVVKMNME------SDVSIQ-----NSLVSLYSKC 379
L + +L+ Q + I+ ++ M+ S +S++ NS+++ Y+ C
Sbjct: 311 LLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHC 370
Query: 380 GNVVDAYRI-------------------------------FTNIDERNIVSYNSMISGFA 408
G +A R+ F + ERN+VS+NS+I+G+
Sbjct: 371 GRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYV 430
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT 460
QNGL EALN F MK +G P+Q T + L A ++ + G ++ ++KT
Sbjct: 431 QNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKT 483
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 176/329 (53%), Gaps = 22/329 (6%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + GR R E V V ++ + +I+ NS+I+ Y + G + A ++F +M
Sbjct: 17 TQNLRISQLGRSGRIEEAVAVFLKMT----ERNIVTYNSMISAYAKNGRIANARELFDLM 72
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
+R+ VSWNS+I+GY+HN +E+A RLF+RM +D SWT MIT ++ G LEK+ ELFN
Sbjct: 73 PQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFN 132
Query: 290 MMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
++P+K D V A+I+G+ + EA + F EML K+V ++ +S+LS +
Sbjct: 133 LLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNV----VSWNSILSGYTKNGKMQ 188
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G Q + + N+ S N +V Y G++ A+ F I N+VS+ +M+SGFA
Sbjct: 189 LGLQFFEAMGERNVVS----WNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFA 244
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
G EA NLF +M + LV ++ +++ A +++ + F M E
Sbjct: 245 HYGRMTEARNLFNEMPTKNLV----SWNAMIGAYVRENQIDDAYKLFMEMP-----EKDS 295
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFE 497
+ M++ R G L +A +++N M ++
Sbjct: 296 VSWTAMINGYVRVGKLLQAREILNLMPYK 324
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
S V QN +S + G + +A +F + ERNIV+YNSMIS +A+NG A LF M
Sbjct: 13 SYVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLM 72
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM--KTLYNIEPGPEHYACMVDILGRA 481
LV ++ S+++ H LVE+ F M + +Y+ + M+ R
Sbjct: 73 PQRNLV----SWNSMIAGYLHNELVEDAARLFDRMFKRDIYS-------WTLMITCYTRI 121
Query: 482 GSLAEAIDLIN 492
G L +A +L N
Sbjct: 122 GELEKARELFN 132
>gi|8920616|gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810
from Arabidopsis thaliana BAC F19I3 gb|AC004238. It
contains a PPR repeat domain PF|01535. ESTs gb|AV539170,
gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and
gb|AV533492 come from this gene [Arabidopsis thaliana]
Length = 864
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/601 (40%), Positives = 371/601 (61%), Gaps = 21/601 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
+ S+ M+TAL ++ S +A E+F MP RN VS+ ++TG +R G +A++++
Sbjct: 239 KNVVSWTVMLTALCDDGRS-EDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDA 297
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
MP+R D V NA+I GY++ EEA +F M EK+VV W SMV GYC+ G V EA
Sbjct: 298 MPSR--DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYR 355
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG--GMAFNSITLTILFEACGRF 181
+F +MPE+N+V+WTAM+ G+ + + + LFL M++ ++ N TL L ACG
Sbjct: 356 LFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGL 415
Query: 182 ---FRYREGVQVHGLVSRFGF---DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
FR R G Q+H V G+ D+D L S++ MY G + A + + D
Sbjct: 416 GVEFR-RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQ 472
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPG-KDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
S N +I+ Y+ NG++E A LFER+ D VSWT+MI G+ G++ ++ LF + +K
Sbjct: 473 SCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK 532
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D VTWT +ISG V NE + EA +M+R ++P T S +LS++ AT+ L+QG IH
Sbjct: 533 DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH 592
Query: 355 AHVVKMNM--ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+ K + D+ +QNSLVS+Y+KCG + DAY IF + +++ VS+NSMI G + +GL
Sbjct: 593 CVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGL 652
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
++ALNLF++M D G PN +TFL VLSAC+H GL+ G FK+MK Y+I+PG +HY
Sbjct: 653 ADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI 712
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG-AGRTHLNLD---LAKLAAQHLME 528
M+D+LGRAG L EA + I+++ F P V+GALLG G + D +A+ AA L+E
Sbjct: 713 SMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLE 772
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
L+P +A +V L ++Y+ +G+ +R + +K ++K+PGCSW+++ + ++FL+G K
Sbjct: 773 LDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDK 832
Query: 589 S 589
S
Sbjct: 833 S 833
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 229/513 (44%), Gaps = 99/513 (19%)
Query: 23 IYEAFEIFATMPMRNAVS----YAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI 78
+ A + +P R +++ + ++++ + + G EA L+ MP R + V NA++
Sbjct: 161 LVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER--NIVTCNAML 218
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+GY+K R EA +F M K+VV+W M+ C GR +A E+FD+MPE+NVV+W
Sbjct: 219 TGYVKCRRMNEAWTLFREM-PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNT 277
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+V G ++ E +F +M SR
Sbjct: 278 LVTGLIRNGDMEKAKQVFDAMP----------------------------------SR-- 301
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
D++ N++I Y M+EA +F MS+++ V+W S++ GY G++ EAYRLF
Sbjct: 302 ---DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFC 358
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
MP ++ VSWT MI+GF+ W NE Y EA
Sbjct: 359 EMPERNIVSWTAMISGFA----------------------W---------NELYREALML 387
Query: 319 FIEMLRKD---VRPNQLTLSSVLSASAATAT--LNQGSQIHAHVVKMNMES---DVSIQN 370
F+EM +KD V PN TL S+ A G Q+HA V+ E+ D +
Sbjct: 388 FLEM-KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAK 446
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SLV +Y+ G + A + + ++ S N +I+ + +NG E A LF ++K +
Sbjct: 447 SLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFERVKS---LH 501
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+++++ S++ G V F F+ + + + M+ L + AEA L
Sbjct: 502 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----WTVMISGLVQNELFAEAASL 556
Query: 491 INSMT---FEPPPGVWGALLGAGRTHLNLDLAK 520
++ M +P + LL + NLD K
Sbjct: 557 LSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 589
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 148/272 (54%), Gaps = 16/272 (5%)
Query: 183 RYREGVQVHGL-----VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
R EG VH + + G ++ S+++ Y + G++DEA +F +M +R+ V+
Sbjct: 155 RLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTC 214
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N++++GYV + EA+ LF MP K+ VSWT M+T G E ++ELF+ MPE++ V
Sbjct: 215 NAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV 273
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W +++G + N E+A + F M +DV + + N G + +
Sbjct: 274 SWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIE--------NDGMEEAKLL 325
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
E +V S+V Y + G+V +AYR+F + ERNIVS+ +MISGFA N L EAL
Sbjct: 326 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREAL 385
Query: 418 NLFRKMKD--EGLVPNQITFLSVLSACNHVGL 447
LF +MK + + PN T +S+ AC +G+
Sbjct: 386 MLFLEMKKDVDAVSPNGETLISLAYACGGLGV 417
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/568 (38%), Positives = 349/568 (61%), Gaps = 11/568 (1%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
D+ +A YNAMI+ + +A + MP + +S+ +++ G R G A + +
Sbjct: 133 DKCTACYNAMISGYAKHG-RFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFD 191
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
MPAR D V N ++ GY++ G + AA +F + +VV+W ++++GYC+ GR+ EAR
Sbjct: 192 EMPAR--DMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIGEAR 249
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
E+FD++P++NV AW M+ GY+++ E+ + LF M NSI+ T + A R
Sbjct: 250 ELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDK----NSISWTTMISALVRGG 305
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+ +E L+ + FD +++ Y + +D+A +F + RDAV WN++IS
Sbjct: 306 KLQEA---KDLLDKMPFD-SFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMIS 361
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
GYVH G ++EA LF++MP KD VSW TMI G++ G + K++ +F M +++ V+W ++
Sbjct: 362 GYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSV 421
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
ISGFV N EA + F+ M R R + T + LSA A A L+ G Q H+ + +
Sbjct: 422 ISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSLLARSGY 481
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
D N+L+S Y+KCG +++A ++F + +IVS+N++I G+A NG G EA+++FR+
Sbjct: 482 IGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFRE 541
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
M+D + P+++TF+ VLSAC+H GL++EGF +F SM Y + P EHYACMVD+LGR+G
Sbjct: 542 MEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYACMVDLLGRSG 601
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L+EA ++I M +P GVWGA+LGA R H N +LA+LAA+ L ELEP + YV+LS+
Sbjct: 602 RLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEPHKTSNYVLLSN 661
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
+ + GK + +R+ K + + K+PG
Sbjct: 662 ITAEAGKWDEAQNMRVFIKERGVHKTPG 689
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 219/458 (47%), Gaps = 69/458 (15%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F +MP RN VSY AM++ R G +A L+ +P R ++V NA+I+ G
Sbjct: 30 ARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRR--NTVSWNAMIAACSDHG 87
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAWTAMVDGYM 144
R +A +F+AM +D +W MV Y + G + AR+ D+MP +K + AM+ GY
Sbjct: 88 RVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYA 147
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
K F+D L M DII
Sbjct: 148 KHGRFDDAVALLREMPAP---------------------------------------DII 168
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
NS++ R G M A K F M RD VSWN ++ GYV G+++ A LF +P +
Sbjct: 169 SWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPN 228
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
VSW T++ G+ G + ++ ELF+ +P+++ W ++SG++ EEA++ F EM
Sbjct: 229 VVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPD 288
Query: 325 KD-----------VRPNQLTLSSVL-------SASAATATLN---QGSQI-HAHVVKMNM 362
K+ VR +L + L S +A TA ++ Q I A ++ +
Sbjct: 289 KNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGL 348
Query: 363 E-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
E D N+++S Y CG + +A +F + +++VS+N+MI+G+A +G +A+ +FR
Sbjct: 349 EVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFR 408
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
KM N +++ SV+S GL E +F M+
Sbjct: 409 KMNQR----NTVSWNSVISGFVQNGLCVEALQHFVLMR 442
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 148/323 (45%), Gaps = 49/323 (15%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
N +T R G + A ++F M R+ VS+N+++S +G I +A RLF+ +P ++ V
Sbjct: 15 NQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTV 74
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT-------------------------- 300
SW MI S G + + +LF+ MP +D +WT
Sbjct: 75 SWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRMPGDK 134
Query: 301 ------AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
A+ISG+ + ++++A + +LR+ P+ ++ +SVL + + +
Sbjct: 135 CTACYNAMISGYAKHGRFDDA----VALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFF 190
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+ +M S N ++ Y + G+V A +F + N+VS+ ++++G+ + G
Sbjct: 191 DEMPARDMVS----WNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIG 246
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
EA LF ++ D + + +LS + +EE + F M +I + M
Sbjct: 247 EARELFDRIPDRNVAAWNV----MLSGYLRLSHMEEAYKLFTEMPDKNSIS-----WTTM 297
Query: 475 VDILGRAGSLAEAIDLINSMTFE 497
+ L R G L EA DL++ M F+
Sbjct: 298 ISALVRGGKLQEAKDLLDKMPFD 320
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/671 (34%), Positives = 381/671 (56%), Gaps = 72/671 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M+ R S+N MI ++NN + EA E+F MP R+ S+A MIT + R+G +A EL
Sbjct: 74 MSLRNLVSWNTMIAGYLHNNM-VEEASELFDVMPERDNFSWALMITCYTRKGKLEKAREL 132
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFE------------------------- 95
+P + D+ C NA+I+GY K G+ +A ++FE
Sbjct: 133 LELVPDKL-DTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHL 191
Query: 96 ------AMVEKDVVAWGSMVDGYCKKG-------------------------------RV 118
+M E++VV+W MV GY K G ++
Sbjct: 192 ALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKM 251
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EARE+FD+MP KNVV+W AM+ Y++ ++ LF M +S++ T +
Sbjct: 252 AEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHK----DSVSWTTIINGY 307
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
R + E QV+ + DI ++++ + G +DEA+++FS + D V WN
Sbjct: 308 IRVGKLDEARQVYNQMP----CKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWN 363
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
S+I+GY +G ++EA LF +MP K+ VSW TMI+G++ G ++++ E+F M EK+ V+
Sbjct: 364 SMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVS 423
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W ++I+GF+ N Y +A + + M ++ +P+Q T + LSA A A L G+Q+H +++
Sbjct: 424 WNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYIL 483
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K +D+ + N+L+++Y+KCG V A ++F +I+ +++S+NS+ISG+A NG +A
Sbjct: 484 KSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFK 543
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F +M E +VP+++TF+ +LSAC+H GL +G FK M + IEP EHY+C+VD+L
Sbjct: 544 AFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLL 603
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR G L EA + + M + G+WG+LLGA R H NL+L + AA+ L ELEP +A+ Y+
Sbjct: 604 GRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYI 663
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
LS++++ G+ + RVRM + KR K PGCSWI +++++ FL+ + L K I++
Sbjct: 664 TLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLSHDPAKLRPKNIQI 723
Query: 599 TLQTISKGTKE 609
L T++ ++
Sbjct: 724 ILNTLAAHMRD 734
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 222/402 (55%), Gaps = 38/402 (9%)
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
K+G+ EEA RIF M K++V + SM+ K R+ +AR++FD+M +N+V+W M+ G
Sbjct: 29 KLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAG 88
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ------------- 189
Y+ + E+ +LF M F+ + + G+ + RE ++
Sbjct: 89 YLHNNMVEEASELFDVMPERD-NFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNA 147
Query: 190 -VHGLVSRFGFD-----------YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
+ G + F+ D++ NS++ Y + G M A + F M++R+ VSW
Sbjct: 148 MIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSW 207
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N +++GYV +G++ A++LFE++P + VSW TM+ G + G + ++ ELF+ MP K+ V
Sbjct: 208 NLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVV 267
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W A+I+ +V + Q +EA + F +M KD ++ +++++ L++ Q++ +
Sbjct: 268 SWNAMIATYVQDLQVDEAVKLFKKMPHKD----SVSWTTIINGYIRVGKLDEARQVYNQM 323
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
D++ Q +L+S + G + +A ++F+ I ++V +NSMI+G++++G +EAL
Sbjct: 324 PC----KDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEAL 379
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
NLFR+M + N +++ +++S G ++ F++M+
Sbjct: 380 NLFRQMP----IKNSVSWNTMISGYAQAGQMDRATEIFQAMR 417
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 159/294 (54%), Gaps = 18/294 (6%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+++ NS+I++ + + +A ++F MS R+ VSWN++I+GY+HN +EEA LF+ MP
Sbjct: 47 NLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMP 106
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK-DDVTWTAIISGFVNNEQYEEAFRWFI 320
+D SW MIT ++ KG LEK+ EL ++P+K D W A+I+G+ Q+ +A + F
Sbjct: 107 ERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFE 166
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+M KD+ ++ +S+L+ ++ Q + + N+ S N +V+ Y K G
Sbjct: 167 QMPAKDL----VSYNSMLAGYTQNGKMHLALQFFESMTERNVVS----WNLMVAGYVKSG 218
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
++ A+++F I N VS+ +M+ G A+ G EA LF +M + N +++ ++++
Sbjct: 219 DLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSK----NVVSWNAMIA 274
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
V+E FK M ++ + +++ R G L EA + N M
Sbjct: 275 TYVQDLQVDEAVKLFKKMPHKDSVS-----WTTIINGYIRVGKLDEARQVYNQM 323
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 164/342 (47%), Gaps = 61/342 (17%)
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+ + G++ G + F++ N I G+LG ++EA ++F M+ ++ V++NS+I
Sbjct: 1 MKLKLGIRSIGEAGKHAFNH-----NRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMI 55
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
S N I +A +LF++M ++ VSW TMI G+ +E++ ELF++MPE+D+ +W
Sbjct: 56 SVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWAL 115
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+I+ + + E+A R +E++ P++L
Sbjct: 116 MITCYTRKGKLEKA-RELLELV-----PDKL----------------------------- 140
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
D + N++++ Y+K G DA ++F + +++VSYNSM++G+ QNG AL F
Sbjct: 141 ---DTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFE 197
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE--HYACMVDILG 479
M + +V + G V+ G + S L+ P P + M+ L
Sbjct: 198 SMTERNVVSWNLMV---------AGYVKSGDL--SSAWQLFEKIPNPNAVSWVTMLCGLA 246
Query: 480 RAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTHLNLDLA 519
+ G +AEA +L + M P V W A++ L +D A
Sbjct: 247 KYGKMAEARELFDRM---PSKNVVSWNAMIATYVQDLQVDEA 285
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/610 (36%), Positives = 377/610 (61%), Gaps = 26/610 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R++ +YNAMI+ ++NN A ++F MP R+ +S+ M++G+V+ G A L
Sbjct: 86 MRRRSTVTYNAMISGYLSNN-KFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARAL 144
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP + D V NA++SG+ + G EEA +IF+ M+ K+ ++W ++ Y + GR+ +
Sbjct: 145 FNQMPEK--DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIED 202
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEACG 179
AR +FD + +V+W ++ GY++ +D LF M R +++N I +T
Sbjct: 203 ARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWN-IMIT------- 254
Query: 180 RFFRYREGVQVHGLVS--RFGFD----YDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
G +GL+S R F+ D+ ++++ + + G +DEA ++F M +++
Sbjct: 255 -------GYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN 307
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
VSWN++I+GYV + +IE+A LF++MP ++ SW TM+TG++ GN++++ LF+ MP+
Sbjct: 308 EVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQ 367
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+D ++W A+ISG+ + Q EEA FI+M R N+ L+ LS+ A A L G Q+
Sbjct: 368 RDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQL 427
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H +VK ++ N+L+++Y KCG++ +A+ +F +I E++IVS+N+MI+G+A++G G
Sbjct: 428 HGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFG 487
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
+EAL LF MK + P+ +T + VLSAC+H GLV++G YF SM Y I +HY C
Sbjct: 488 KEALALFESMK-MTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTC 546
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDS 533
M+D+LGRAG L EA++L+ SM F P WGALLGA R H + +L + AA+ + E+EPD+
Sbjct: 547 MIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDN 606
Query: 534 ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDL 593
+ YV+LS+LY+ G+ R+ +R K + K ++K PG SW+ +++K H+F G S +
Sbjct: 607 SGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEA 666
Query: 594 KEIEVTLQTI 603
+ I L+ +
Sbjct: 667 ERIYAYLEEL 676
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 239/478 (50%), Gaps = 52/478 (10%)
Query: 97 MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF 156
+V+ D+V W + Y +KG+ A +F+ M ++ V + AM+ GY+ + F+ +F
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVF 114
Query: 157 LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
M + I+ ++ + + L ++ + D++ N++++ + +
Sbjct: 115 EKMPDRDL----ISWNVMLSG---YVKNGNLSAARALFNQMP-EKDVVSWNAMLSGFAQN 166
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR--------------------- 255
GF++EA K+F M ++ +SWN L+S YV NG IE+A R
Sbjct: 167 GFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYV 226
Query: 256 ----------LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
LF+RMP +D +SW MITG++ G L ++ LF +P +D WTA++SG
Sbjct: 227 RKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSG 286
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
FV N +EA R F EM K N+++ +++++ + + + ++ + N S
Sbjct: 287 FVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSS- 341
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
N++V+ Y++CGN+ A +F + +R+ +S+ +MISG+AQ+G EEAL+LF KMK
Sbjct: 342 ---WNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKR 398
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
+G + N+ LS+C + +E G ++ + +K + + G ++ + G+ GS+
Sbjct: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF--QTGYIAGNALLAMYGKCGSI 456
Query: 485 AEAIDLINSMTFEPPPGVWGALL-GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
EA D+ +T E W ++ G R + L M ++PD T VLS
Sbjct: 457 EEAFDVFEDIT-EKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLS 513
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/610 (36%), Positives = 376/610 (61%), Gaps = 26/610 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R++ +YNAMI+ ++NN A ++F MP R+ +S+ M++G+V+ G A L
Sbjct: 86 MRRRSTVTYNAMISGYLSNN-KFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARAL 144
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP + D V NA++SG+ + G EEA +IF+ M+ K+ ++W ++ Y + GR+ +
Sbjct: 145 FNQMPEK--DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIED 202
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEACG 179
AR +FD + +V+W ++ GY++ +D LF M R +++N I +T
Sbjct: 203 ARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWN-IMIT------- 254
Query: 180 RFFRYREGVQVHGLVS--RFGFD----YDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
G +GL+S R F+ D+ ++++ + + G +DEA ++F M +++
Sbjct: 255 -------GYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN 307
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
VSWN++I+GYV + +IE+A LF++MP ++ SW TM+TG++ GN++++ LF+ MP+
Sbjct: 308 EVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQ 367
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+D ++W A+ISG+ + Q EEA FI+M R N+ L+ LS+ A A L G Q+
Sbjct: 368 RDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQL 427
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H +VK ++ N+L+++Y KCG++ +A+ +F +I E++IVS+N+MI+G+A++G G
Sbjct: 428 HGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFG 487
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
+EAL LF MK + P+ +T + VLSAC+H G V++G YF SM Y I +HY C
Sbjct: 488 KEALALFESMK-MTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTC 546
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDS 533
M+D+LGRAG L EA++L+ SM F P WGALLGA R H + +L + AA+ + E+EPD+
Sbjct: 547 MIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDN 606
Query: 534 ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDL 593
+ YV+LS+LY+ G+ R+ +R K + K ++K PG SW+ +++K H+F G S +
Sbjct: 607 SGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEA 666
Query: 594 KEIEVTLQTI 603
+ I L+ +
Sbjct: 667 ERIYAYLEEL 676
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 239/478 (50%), Gaps = 52/478 (10%)
Query: 97 MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF 156
+V+ D+V W + Y +KG+ A +F+ M ++ V + AM+ GY+ + F+ +F
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVF 114
Query: 157 LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
M + I+ ++ + + L ++ + D++ N++++ + +
Sbjct: 115 EKMPDRDL----ISWNVMLSG---YVKNGNLSAARALFNQMP-EKDVVSWNAMLSGFAQN 166
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR--------------------- 255
GF++EA K+F M ++ +SWN L+S YV NG IE+A R
Sbjct: 167 GFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYV 226
Query: 256 ----------LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
LF+RMP +D +SW MITG++ G L ++ LF +P +D WTA++SG
Sbjct: 227 RKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSG 286
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
FV N +EA R F EM K N+++ +++++ + + + ++ + N S
Sbjct: 287 FVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSS- 341
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
N++V+ Y++CGN+ A +F + +R+ +S+ +MISG+AQ+G EEAL+LF KMK
Sbjct: 342 ---WNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKR 398
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
+G + N+ LS+C + +E G ++ + +K + + G ++ + G+ GS+
Sbjct: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF--QTGYIAGNALLAMYGKCGSI 456
Query: 485 AEAIDLINSMTFEPPPGVWGALL-GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
EA D+ +T E W ++ G R + L M ++PD T VLS
Sbjct: 457 EEAFDVFEDIT-EKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLS 513
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/586 (39%), Positives = 347/586 (59%), Gaps = 42/586 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+ RT +S+NAM+ A EA +F MP RN VS+ +I+G ++ GM EA +
Sbjct: 50 LPHRTVSSWNAMVAAYFEAR-QPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRV 108
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R + V +++ GY++ G EA R+F M K+VV+W M+ G ++GRV +
Sbjct: 109 FDTMPDR--NVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDD 166
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD MPEK+VVA T M+ GY + ++ LF M + N +T T
Sbjct: 167 ARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPK----RNVVTWT-------- 214
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
++++ Y R G +D A K+F +M +R+ VSW ++
Sbjct: 215 ---------------------------AMVSGYARNGKVDVARKLFEVMPERNEVSWTAM 247
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+ GY H+G + EA LF+ MP K V MI GF G ++K+ +F M E+D+ TW+
Sbjct: 248 LLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWS 307
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+I + EA F M R+ + N +L SVLS + A+L+ G Q+HA +V+
Sbjct: 308 AMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRS 367
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ D+ + + L+++Y KCGN+V A ++F +++V +NSMI+G++Q+GLGEEALN+F
Sbjct: 368 EFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVF 427
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
M G+ P+ +TF+ VLSAC++ G V+EG F++MK Y +EPG EHYAC+VD+LGR
Sbjct: 428 HDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGR 487
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
A + EA+ L+ M EP VWGALLGA RTH+ LDLA++A + L +LEP +A PYV+L
Sbjct: 488 ADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLL 547
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
S++Y+ G+ RD +R K K + + K PGCSWI ++ KVH+F G
Sbjct: 548 SNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGG 593
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/606 (36%), Positives = 353/606 (58%), Gaps = 27/606 (4%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
T A+ T + N +C + A +F MP+RN+VSY AMI+G++R F A +L+
Sbjct: 32 HTVKCTKAISTHMRNGHCDL--ALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDK 89
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
MP + D N +++GY + R +A +F++M EKDVV+W +M+ GY + G V EAR+
Sbjct: 90 MPHK--DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARD 147
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS------MRRGGMAFNSITLTILFEA 177
+FD+MP KN ++W ++ Y++ E+ LF S + + + +L +A
Sbjct: 148 VFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDA 207
Query: 178 CGRF--FRYREGVQVHGLVSRFGFD---------------YDIILGNSIITMYGRLGFMD 220
F R+ + + ++S + D D+ +++ Y + G +D
Sbjct: 208 RQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLD 267
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
EA +VF M ++ +S+N +I+GY ++ LFE MP + SW MI+G+ G+
Sbjct: 268 EARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGD 327
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
L ++ LF+MMP++D V+W AII+G+ N YEEA +EM R N+ T LSA
Sbjct: 328 LAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSA 387
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A A L G Q+H VV+ E + N+LV +Y KCG + +AY +F + ++IVS+
Sbjct: 388 CADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSW 447
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
N+M++G+A++G G +AL +F M G+ P++IT + VLSAC+H GL + G YF SM
Sbjct: 448 NTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNK 507
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
Y I P +HYACM+D+LGRAG L EA +LI +M FEP WGALLGA R H N++L +
Sbjct: 508 DYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGE 567
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
AA+ + ++EP ++ YV+LS+LY+ G+ D +++R+K + ++K+PG SW+ +++K+
Sbjct: 568 QAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKI 627
Query: 581 HLFLAG 586
H F G
Sbjct: 628 HTFTVG 633
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 208/469 (44%), Gaps = 88/469 (18%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + S S+N ++ A + + + EA +F + +S ++ G+V+R M +A +L
Sbjct: 152 MPHKNSISWNGLLAAYVRSG-RLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQL 210
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ +P RD + N +ISGY + G +A R+FE +DV W +MV Y + G + E
Sbjct: 211 FDQIPV--RDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDE 268
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD+MP+K +++ M+ GY + + G +LF M F G
Sbjct: 269 ARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMP--------------FPNIGS 314
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ N +I+ Y + G + +A +F MM +RD+VSW ++
Sbjct: 315 W-------------------------NIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAI 349
Query: 241 ISGYVHNGEIEEAYRLFERMP--------------------------GKDFVSWTTMITG 274
I+GY NG EEA + M GK V + TG
Sbjct: 350 IAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQ-VHGQVVRTG 408
Query: 275 FSSK--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
+ G ++++ ++F + KD V+W +++G+ + +A F
Sbjct: 409 YEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFE 468
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQ-IHAHVVKMNMESDVSIQNSLVSLYSKC 379
M+ V+P+++T+ VLSA + T ++G++ H+ + + ++ L +
Sbjct: 469 SMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRA 528
Query: 380 GNVVDAYRIFTNID-ERNIVSYNSMISGFAQNG---LGEEALNLFRKMK 424
G + +A + N+ E + ++ +++ +G LGE+A + KM+
Sbjct: 529 GCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKME 577
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/629 (36%), Positives = 366/629 (58%), Gaps = 41/629 (6%)
Query: 11 AMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
A+ T + N +C A +F TMP R++VSY AMI+G++R F A L+ MP R D
Sbjct: 55 AISTHMRNGHCD--SALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPER--D 110
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
N +++GY++ R +A R+F+ M EKDVV+W S++ GY + G V EARE+FD MPE
Sbjct: 111 LFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE 170
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR------- 183
KN ++W ++ Y+ E+ LF S ++ I+ L G F R
Sbjct: 171 KNSISWNGLLAAYVHNGRIEEACLLFESKS----DWDLISWNCLM---GGFVRKKKLGDA 223
Query: 184 --------YREGVQVHGLVSRFG-----------FD----YDIILGNSIITMYGRLGFMD 220
R+ + + ++S + FD D+ ++++ Y + G +D
Sbjct: 224 RWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLD 283
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
EA F M +++ VS+N++I+GYV +++ A LFE MP ++ SW TMITG+ G+
Sbjct: 284 EAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGD 343
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+ ++ + F+MMP++D V+W AII+G+ + YEEA F+E+ + N+ T LS
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALST 403
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A A L G QIH VKM + + N+L+++Y KCG++ +A F I+E+++VS+
Sbjct: 404 CADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW 463
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
N+M++G+A++G G +AL +F MK G+ P++IT + VLSAC+H GL++ G YF SM
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK 523
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
Y + P +HY CM+D+LGRAG L EA DLI +M F+P WGALLGA R H N +L +
Sbjct: 524 DYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGE 583
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
AA+ + ++EP ++ YV+LS+LY+ G+ D +++R K + ++K PG SW+ +++K+
Sbjct: 584 KAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKI 643
Query: 581 HLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
H F G S + + I L+ + +E
Sbjct: 644 HTFSVGDCSHPEKERIYAYLEELDLKMRE 672
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 244/505 (48%), Gaps = 92/505 (18%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N IS +++ G C+ A +F M + V++ +M+ GY + + AR +FD+MPE+++
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLF 112
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W M+ GY++ D LF M
Sbjct: 113 SWNVMLTGYVRNCRLGDARRLFDLMP---------------------------------- 138
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ D++ NS+++ Y + G++DEA +VF M +++++SWN L++ YVHNG IEEA
Sbjct: 139 -----EKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEAC 193
Query: 255 RLFE-------------------------------RMPGKDFVSWTTMITGFSSKGNLEK 283
LFE +MP +D +SW TMI+G++ G L +
Sbjct: 194 LLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQ 253
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ LF+ P +D TWTA++SG+V N +EA +F EM K N+++ +++++
Sbjct: 254 ARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQ 309
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
T ++ ++ + N +S N++++ Y + G++ A + F + +R+ VS+ ++
Sbjct: 310 TKKMDIARELFESMPCRN----ISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAI 365
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLY 462
I+G+AQ+G EEALN+F ++K +G N+ TF LS C + +E G I+ +++K Y
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGY 425
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL------GAGRTHLNL 516
G ++ + + GS+ EA D + E W +L G GR L +
Sbjct: 426 GT--GCFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHGFGRQALTV 482
Query: 517 DLAKLAAQHLMELEPDSATPYVVLS 541
+ ++PD T VLS
Sbjct: 483 ----FESMKTAGVKPDEITMVGVLS 503
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 138/259 (53%), Gaps = 12/259 (4%)
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D DI+ N I+ + R G D A VF+ M +R +VS+N++ISGY+ N + A LF++
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
MP +D SW M+TG+ L + LF++MPEKD V+W +++SG+ N +EA F
Sbjct: 106 MPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVF 165
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
M K N ++ + +L+A + + + + + D+ N L+ + +
Sbjct: 166 DNMPEK----NSISWNGLLAAYVHNGRIEEACLL----FESKSDWDLISWNCLMGGFVRK 217
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ DA +F + R+ +S+N+MISG+AQ G L+ R++ DE + T+ +++
Sbjct: 218 KKLGDARWLFDKMPVRDAISWNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMV 273
Query: 440 SACNHVGLVEEGFIYFKSM 458
S G+++E +F M
Sbjct: 274 SGYVQNGMLDEAKTFFDEM 292
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 8/171 (4%)
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
R+ D + W I+ G+ + ++ +FN MP + V++ A+ISG++ N ++ A
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F +M +D+ + + +L+ L ++ + E DV NSL+S Y++
Sbjct: 103 FDQMPERDL----FSWNVMLTGYVRNCRLGDARRL----FDLMPEKDVVSWNSLLSGYAQ 154
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
G V +A +F N+ E+N +S+N +++ + NG EEA LF D L+
Sbjct: 155 NGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLI 205
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/629 (36%), Positives = 366/629 (58%), Gaps = 41/629 (6%)
Query: 11 AMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
A+ T + N +C A +F TMP R++VSY AMI+G++R F A L+ MP R D
Sbjct: 55 AISTHMRNGHCD--SALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPER--D 110
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
N +++GY++ R +A R+F+ M EKDVV+W S++ GY + G V EARE+FD MPE
Sbjct: 111 LFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE 170
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR------- 183
KN ++W ++ Y+ E+ LF S ++ I+ L G F R
Sbjct: 171 KNSISWNGLLAAYVHNGRIEEACLLFESKS----DWDLISWNCLM---GGFVRKKKLGDA 223
Query: 184 --------YREGVQVHGLVSRFG-----------FD----YDIILGNSIITMYGRLGFMD 220
R+ + + ++S + FD D+ ++++ Y + G +D
Sbjct: 224 RWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLD 283
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
EA F M +++ VS+N++I+GYV +++ A LFE MP ++ SW TMITG+ G+
Sbjct: 284 EAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGD 343
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+ ++ + F+MMP++D V+W AII+G+ + YEEA F+E+ + N+ T LS
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALST 403
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A A L G QIH VKM + + N+L+++Y KCG++ +A F I+E+++VS+
Sbjct: 404 CADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW 463
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
N+M++G+A++G G +AL +F MK G+ P++IT + VLSAC+H GL++ G YF SM
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK 523
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
Y + P +HY CM+D+LGRAG L EA DLI +M F+P WGALLGA R H N +L +
Sbjct: 524 DYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGE 583
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
AA+ + ++EP ++ YV+LS+LY+ G+ D +++R K + ++K PG SW+ +++K+
Sbjct: 584 KAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKI 643
Query: 581 HLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
H F G S + + I L+ + +E
Sbjct: 644 HTFSVGDCSHPEKERIYAYLEELDLKMRE 672
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 244/505 (48%), Gaps = 92/505 (18%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N IS +++ G C+ A +F M + V++ +M+ GY + + AR +FD+MPE+++
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLF 112
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W M+ GY++ D LF M
Sbjct: 113 SWNVMLTGYVRNCRLGDARRLFDLMP---------------------------------- 138
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ D++ NS+++ Y + G++DEA +VF M +++++SWN L++ YVHNG IEEA
Sbjct: 139 -----EKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEAC 193
Query: 255 RLFE-------------------------------RMPGKDFVSWTTMITGFSSKGNLEK 283
LFE +MP +D +SW TMI+G++ G L +
Sbjct: 194 LLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQ 253
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ LF+ P +D TWTA++SG+V N +EA +F EM K N+++ +++++
Sbjct: 254 ARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQ 309
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
T ++ ++ + N+ S N++++ Y + G++ A + F + +R+ VS+ ++
Sbjct: 310 TKKMDIARELFESMPCRNISS----WNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAI 365
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLY 462
I+G+AQ+G EEALN+F ++K +G N+ TF LS C + +E G I+ +++K Y
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGY 425
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL------GAGRTHLNL 516
G ++ + + GS+ EA D + E W +L G GR L +
Sbjct: 426 GT--GCFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHGFGRQALTV 482
Query: 517 DLAKLAAQHLMELEPDSATPYVVLS 541
+ ++PD T VLS
Sbjct: 483 ----FESMKTAGVKPDEITMVGVLS 503
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 138/259 (53%), Gaps = 12/259 (4%)
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D DI+ N I+ + R G D A VF+ M +R +VS+N++ISGY+ N + A LF++
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
MP +D SW M+TG+ L + LF++MPEKD V+W +++SG+ N +EA F
Sbjct: 106 MPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVF 165
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
M K N ++ + +L+A + + + + + D+ N L+ + +
Sbjct: 166 DNMPEK----NSISWNGLLAAYVHNGRIEEACLL----FESKSDWDLISWNCLMGGFVRK 217
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ DA +F + R+ +S+N+MISG+AQ G L+ R++ DE + T+ +++
Sbjct: 218 KKLGDARWLFDKMPVRDAISWNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMV 273
Query: 440 SACNHVGLVEEGFIYFKSM 458
S G+++E +F M
Sbjct: 274 SGYVQNGMLDEAKTFFDEM 292
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 154/652 (23%), Positives = 253/652 (38%), Gaps = 160/652 (24%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R +S+N MIT I +A + F MP R+ VS+AA+I G+ + G + EA +
Sbjct: 323 MPCRNISSWNTMITGY-GQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNM 381
Query: 61 YVNMPARWRD----------SVCS---------------------------NALISGYLK 83
+V + S C+ NAL++ Y K
Sbjct: 382 FVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFK 441
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV----VAWTAM 139
G +EA FE + EKDVV+W +M+ GY + G +A +F+ M V + +
Sbjct: 442 CGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGV 501
Query: 140 VDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+ + G + F SM + G+ S T + + GR R E L+
Sbjct: 502 LSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEE---AQDLIRNMP 558
Query: 199 FD-----YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
F + +LG S I +G ++A ++ M +++ + L + Y +G +A
Sbjct: 559 FQPGAASWGALLGASRI--HGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDA 616
Query: 254 YRLFERM--------PGKDFVSWTTMITGFS-------SKGNLEKSIELFNM-MPEKDDV 297
++ +M PG +V I FS K + +E ++ M E+ V
Sbjct: 617 DKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYV 676
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+ T ++ V E+ E ++ S L+ + T+ G I
Sbjct: 677 SLTKLVLHDVEEEEKEHMLKYH---------------SEKLAVAFGILTIPGGRPIR--- 718
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVV---DAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
V N+ +++ + G ++ D++R F + +E GF G+
Sbjct: 719 VMKNLRVCEDCHSAIKHISKIVGRLIILRDSHR-FHHFNE-----------GFCS--CGD 764
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
L F L V+ + GL++ G YF M Y++ P +HY CM
Sbjct: 765 YWLQFF--------------LLVVI----YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCM 806
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
+D+LGR L E GALLGA R H N +L + AAQ ++ P +
Sbjct: 807 IDLLGRVDRLEE-----------------GALLGASRIHGNTELGEKAAQMFFKMGPQN- 848
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
S I K RD ++K PG SW +++K+H F G
Sbjct: 849 ----------SGISKMRDVG----------VQKVPGYSWFEVQNKIHTFSVG 880
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 8/171 (4%)
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
R+ D + W I+ G+ + ++ +FN MP + V++ A+ISG++ N ++ A
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F +M +D+ + + +L+ L ++ + E DV NSL+S Y++
Sbjct: 103 FDQMPERDL----FSWNVMLTGYVRNCRLGDARRL----FDLMPEKDVVSWNSLLSGYAQ 154
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
G V +A +F N+ E+N +S+N +++ + NG EEA LF D L+
Sbjct: 155 NGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLI 205
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/607 (36%), Positives = 354/607 (58%), Gaps = 43/607 (7%)
Query: 11 AMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
A+ + + N +C A +F +MP R++VSY AMI+G++R F A +L+ MP R D
Sbjct: 52 AISSHMRNGHCD--SALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPER--D 107
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
N +++GY++ R EA ++F+ M +KDVV+W +M+ GY + G V EARE+F+KMP
Sbjct: 108 LFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPH 167
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
+N ++W ++ Y+ ++ LF S + I+ L G + +
Sbjct: 168 RNSISWNGLLAAYVHNGRLKEARRLFESQSN----WELISWNCLM---GGYVKRNMLGDA 220
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
L R D+I N++I+ Y ++G + +A ++F+ RD +W +++SGYV NG +
Sbjct: 221 RQLFDRMPVR-DVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMV 279
Query: 251 EEAYR-------------------------------LFERMPGKDFVSWTTMITGFSSKG 279
+EA + LFE MP ++ SW TMITG+ G
Sbjct: 280 DEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNG 339
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+ ++ +LF+MMP++D V+W AIISG+ N YEEA F+EM R N+ T S LS
Sbjct: 340 GIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALS 399
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A A L G Q+H VVK E+ + N+L+ +Y KCG+ +A +F I+E+++VS
Sbjct: 400 TCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVS 459
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+N+MI+G+A++G G +AL LF MK G+ P++IT + VLSAC+H GL++ G YF SM
Sbjct: 460 WNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMD 519
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
YN++P +HY CM+D+LGRAG L EA +L+ +M F+P WGALLGA R H N +L
Sbjct: 520 RDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELG 579
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
+ AA+ + ++EP ++ YV+LS+LY+ G+ D ++R K + ++K G SW+ +++K
Sbjct: 580 EKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNK 639
Query: 580 VHLFLAG 586
+H F G
Sbjct: 640 IHTFSVG 646
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 213/413 (51%), Gaps = 78/413 (18%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V N IS +++ G C+ A R+F +M + V++ +M+ GY + + AR++FDKMP
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E+++ +W M+ GY++ + LF M +
Sbjct: 105 ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK--------------------------- 137
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
D++ N++++ Y + GF+DEA +VF+ M R+++SWN L++ YVHNG
Sbjct: 138 ------------DVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGR 185
Query: 250 IEEAYRLFE-------------------------------RMPGKDFVSWTTMITGFSSK 278
++EA RLFE RMP +D +SW TMI+G++
Sbjct: 186 LKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQV 245
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G+L ++ LFN P +D TWTA++SG+V N +EA ++F EM K N+++ +++L
Sbjct: 246 GDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVK----NEISYNAML 301
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+ + ++ + N +S N++++ Y + G + A ++F + +R+ V
Sbjct: 302 AGYVQYKKMVIAGELFEAMPCRN----ISSWNTMITGYGQNGGIAQARKLFDMMPQRDCV 357
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
S+ ++ISG+AQNG EEALN+F +MK +G N+ TF LS C + +E G
Sbjct: 358 SWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELG 410
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 210/408 (51%), Gaps = 20/408 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+N MI+ + +A +F P+R+ ++ AM++G+V+ GM EA +
Sbjct: 227 MPVRDVISWNTMISGYAQVG-DLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKY 285
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP + + + NA+++GY++ + A +FEAM +++ +W +M+ GY + G + +
Sbjct: 286 FDEMPVK--NEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQ 343
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD MP+++ V+W A++ GY + +E+ ++F+ M+R G + N T + C
Sbjct: 344 ARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCAD 403
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G QVHG V + GF+ +GN+++ MY + G DEAN VF + ++D VSWN++
Sbjct: 404 IAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTM 463
Query: 241 ISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I+GY +G +A LFE M D ++ +++ S G +++ E F M +
Sbjct: 464 IAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYN 523
Query: 297 VT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDV--RPNQLTLSSVLSASAATATLNQ 349
V +T +I + EEA E L +++ P + ++L AS
Sbjct: 524 VKPTSKHYTCMIDLLGRAGRLEEA-----ENLMRNMPFDPGAASWGALLGASRIHGNTEL 578
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
G + V KM ++ + L +LY+ G VD ++ + + E +
Sbjct: 579 GEKAAEMVFKMEPQNS-GMYVLLSNLYAASGRWVDVGKMRSKMREAGV 625
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 218/471 (46%), Gaps = 88/471 (18%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S S+N ++ A ++N + EA +F + +S+ ++ G+V+R M +A +L
Sbjct: 165 MPHRNSISWNGLLAAYVHNG-RLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQL 223
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP RD + N +ISGY +VG +A R+F +DV W +MV GY + G V E
Sbjct: 224 FDRMPV--RDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDE 281
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR+ FD+MP KN +++ AM+ GY++ +LF +M C
Sbjct: 282 ARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAM-----------------PC-- 322
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+I N++IT YG+ G + +A K+F MM +RD VSW ++
Sbjct: 323 --------------------RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAI 362
Query: 241 ISGYVHNGEIEEAYRLFERMP--------------------------GKDFVSWTTMITG 274
ISGY NG EEA +F M GK V + G
Sbjct: 363 ISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQ-VHGQVVKAG 421
Query: 275 FSSK--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
F + G+ +++ ++F + EKD V+W +I+G+ + +A F
Sbjct: 422 FETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFE 481
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQ-IHAHVVKMNMESDVSIQNSLVSLYSKC 379
M + V+P+++T+ VLSA + + +++G++ ++ N++ ++ L +
Sbjct: 482 SMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRA 541
Query: 380 GNVVDAYRIFTNID-ERNIVSYNSMISGFAQNG---LGEEALNLFRKMKDE 426
G + +A + N+ + S+ +++ +G LGE+A + KM+ +
Sbjct: 542 GRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ 592
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 50/327 (15%)
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D DI+ N I+ + R G D A +VF+ M +R +VS+N++ISGY+ N + A LF++
Sbjct: 43 DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDK 102
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
MP +D SW M+TG+ L ++ +LF++MP+KD V+W A++SG+ N +EA F
Sbjct: 103 MPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVF 162
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH---------------AHVVKMNMES 364
+M + N ++ + +L+A L + ++ VK NM
Sbjct: 163 NKMPHR----NSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLG 218
Query: 365 ------------DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
DV N+++S Y++ G++ A R+F R++ ++ +M+SG+ QNG+
Sbjct: 219 DARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGM 278
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM---KTLYNIEP--G 467
+EA RK DE V N+I++ ++L+ G++ +K M L+ P
Sbjct: 279 VDEA----RKYFDEMPVKNEISYNAMLA----------GYVQYKKMVIAGELFEAMPCRN 324
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSM 494
+ M+ G+ G +A+A L + M
Sbjct: 325 ISSWNTMITGYGQNGGIAQARKLFDMM 351
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/594 (38%), Positives = 355/594 (59%), Gaps = 54/594 (9%)
Query: 33 MPMRN-----AVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRC 87
MP R A++Y + I + R G A ++ MP + V N++++GY + R
Sbjct: 6 MPCRRYCTSVAIAYNSQIARYARIGQIESARRVFDEMPDK--GIVSWNSMVAGYFQNNRP 63
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
EA +F+ M E++ V+W ++ GY K V EAR+ FD MPE+NVV+WTAMV GY++
Sbjct: 64 REARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEG 123
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY----DI 203
+ LF M N ++ T++ G + R + GL FD D+
Sbjct: 124 LVSEAETLFWQMPEK----NVVSWTVML---GGLIQVRRIDEARGL-----FDIMPVKDV 171
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+ ++I+ Y + G + EA ++F M +R+ +SW ++ISGYV NG+++ A +LFE MP K
Sbjct: 172 VARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEK 231
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMP------------------------------- 292
+ VSWT M+ G++ G +E++ ELF+ MP
Sbjct: 232 NEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIR 291
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
EKDD TW+A+I + EA F M R+ V+ N +L SVLS A+ A+L+ G Q
Sbjct: 292 EKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQ 351
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+HA +VK +SDV + + L+++Y KCG++V A +IF ++IV +NS+I+G+AQ+GL
Sbjct: 352 VHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGL 411
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
EEAL +F +M G+ + +TF+ VLSAC++ G V+EG F+SMK+ Y +EP EHYA
Sbjct: 412 VEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYA 471
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
CMVD+LGRAG + +A+DLI M E +WGALLGA RTH+N++LA++AA+ L++LEP
Sbjct: 472 CMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPK 531
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+A PY++LS++Y+ G+ D +R ++K++ KSPGCSWI ++ +VH+F G
Sbjct: 532 NAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGG 585
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/586 (38%), Positives = 354/586 (60%), Gaps = 43/586 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+ RT AS+NAM++A ++ +A +F MP RN VS+ MI+G+V+ GM +A ++
Sbjct: 47 LPQRTIASWNAMVSAYFESH-KPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKV 105
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ V +++ GY++ G EEA ++F M ++VV+W M+ G K+ R+ +
Sbjct: 106 FDVMPE--RNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDD 163
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+++FD +PEK+VV T M+ GY +V ++ +LF M+ N T T
Sbjct: 164 AKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMK----VRNVFTWT-------- 211
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
++++ Y + G +D A K+F +M +R+ VSW ++
Sbjct: 212 ---------------------------TMVSGYAKNGRVDVARKLFEVMPERNEVSWTAM 244
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+ GY +G ++EA+ LFE MP K V+ MI F G + ++ +F M E+D+ TW
Sbjct: 245 LMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWN 304
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+I F EA F M R+ V N ++ SVLS A+ A+L+ G Q+HA +V+
Sbjct: 305 AMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRS 364
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ D+ + + L+++Y KCG++V A IF +++V +NSMI+G++Q+GLGEEALN+F
Sbjct: 365 EFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVF 424
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
M G+ P+++TF+ VLSAC++ G V+EGF F++MK Y +EPG EHYACMVD+LGR
Sbjct: 425 HDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGR 484
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG + EA++L+ M EP VWGALLGA R H+ LDLA++A + L +LEP +A PYV+L
Sbjct: 485 AGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLL 544
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
S +Y+ G+ RD +R KK +R+ K PGCSWI ++ KVH+F G
Sbjct: 545 SHMYATKGRWRDVEVLR-KKINRRVIKFPGCSWIEVEKKVHMFTGG 589
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/568 (38%), Positives = 342/568 (60%), Gaps = 12/568 (2%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
D+ +A YNAMI+ N +A ++ MP + VS+ + + G + G A + +
Sbjct: 140 DKCTACYNAMISGYAKNG-RFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFD 198
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
M +D N +++G+++ G A+ F + +V++W ++++GYC+ GR+ +AR
Sbjct: 199 EMV---KDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADAR 255
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
++FD+MPE+NVVAW M+DGY+ + E+ LF M NSI+ T + R
Sbjct: 256 DLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMP----IKNSISWTTIISGLARAG 311
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+ +E L+ + F+ + +++ Y + D+A ++F M D V WN++IS
Sbjct: 312 KLQEA---KDLLDKMSFNC-VAAKTALMHGYLQRNMADDARRIFDGMEVHDTVCWNTMIS 367
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
GYV G +EEA LF+RMP KD VSW TMI G++ G + K+I +F M ++ V+W ++
Sbjct: 368 GYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSV 427
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
ISGFV N+++ +A F+ M R R + T +S L A A A L+ G Q+H +V+
Sbjct: 428 ISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGH 487
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+D N+L+S Y+KCG +++A +IF + ++IVS+N++I G+A NG G EA+ +FR+
Sbjct: 488 INDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFRE 547
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
M+ G+ P+++TF+ +LSAC+H GL++EG +F SM Y ++P EHYACMVD+LGRAG
Sbjct: 548 MEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAG 607
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L EA +L+ M +P GVWGALLGA H N +LA+LAA+ L ELEP A+ YV+LS+
Sbjct: 608 KLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPRKASNYVLLSN 667
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
+ + GK + + R K K + K PG
Sbjct: 668 ISAEAGKWDESEKARASIKEKGVNKPPG 695
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 223/452 (49%), Gaps = 28/452 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F MP+RN V+Y AM++ R G EA L+ MP R ++V NA+I+ G
Sbjct: 37 ARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGR--NTVSWNAMIAALSDHG 94
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAWTAMVDGYM 144
R +A +F+ M +D +W MV Y + G + AR++ D+MP +K + AM+ GY
Sbjct: 95 RVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGDKCTACYNAMISGYA 154
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
K F+D L M + + L L ++ G R VQ + + D+
Sbjct: 155 KNGRFDDAMKLLREMPAPDLVSWNSALAGLTQS-GEMVR---AVQFFDEMVK-----DMT 205
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
N ++ + R G ++ A+ F+ + + +SW +L++GY G I +A LF+RMP ++
Sbjct: 206 SWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPERN 265
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
V+W M+ G+ +E++ +LF+ MP K+ ++WT IISG + +EA +M
Sbjct: 266 VVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISWTTIISGLARAGKLQEAKDLLDKMSF 325
Query: 325 KDVRPNQLTLSSVLSASAA--TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
V + L + A + G ++H D N+++S Y +CG +
Sbjct: 326 NCVAAKTALMHGYLQRNMADDARRIFDGMEVH----------DTVCWNTMISGYVQCGIL 375
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+A +F + +++VS+N+MI+G+AQ+G +A+ +FR+M N +++ SV+S
Sbjct: 376 EEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRR----NTVSWNSVISGF 431
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
+ +F M+ N + +C+
Sbjct: 432 VQNDRFVDALHHFMLMRRGTNRADWSTYASCL 463
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 199/388 (51%), Gaps = 24/388 (6%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA 104
+T R G A L+ MP R ++V NA++S + GR +EA +F+ M ++ V+
Sbjct: 25 LTRLARSGQLAAARRLFDAMPLR--NTVTYNAMLSALARHGRIDEARALFDGMPGRNTVS 82
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS---MRR 161
W +M+ GRV +AR +FD+MP ++ +WT M V C+ G DL L+ + R
Sbjct: 83 WNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVM------VSCYARGGDLELARDVLDR 136
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+ + + R+ + ++ + R D++ NS + + G M
Sbjct: 137 MPGDKCTACYNAMISGYAKNGRFDDAMK----LLREMPAPDLVSWNSALAGLTQSGEMVR 192
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNL 281
A + F M K D SWN +++G+V G++ A F ++ + +SW T++ G+ G +
Sbjct: 193 AVQFFDEMVK-DMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRI 251
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ +LF+ MPE++ V W ++ G+V+ EEA + F EM K N ++ ++++S
Sbjct: 252 ADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIK----NSISWTTIISGL 307
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
A L + + + KM+ V+ + +L+ Y + DA RIF ++ + V +N
Sbjct: 308 ARAGKLQEAKDL---LDKMSFNC-VAAKTALMHGYLQRNMADDARRIFDGMEVHDTVCWN 363
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLV 429
+MISG+ Q G+ EEA+ LF++M ++ +V
Sbjct: 364 TMISGYVQCGILEEAMLLFQRMPNKDMV 391
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 156/322 (48%), Gaps = 50/322 (15%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
N +T R G + A ++F M R+ V++N+++S +G I+EA LF+ MPG++ V
Sbjct: 22 NKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTV 81
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT-------------------------- 300
SW MI S G + + LF+ MP +D+ +WT
Sbjct: 82 SWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPGDK 141
Query: 301 ------AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
A+ISG+ N ++++A +++LR+ P+ ++ +S L+ + + + Q
Sbjct: 142 CTACYNAMISGYAKNGRFDDA----MKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFF 197
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+VK D++ N +++ + + G++ A F I+ N++S+ ++++G+ + G
Sbjct: 198 DEMVK-----DMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIA 252
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
+A +LF +M + +V + +L H+ +EE F M +I + +
Sbjct: 253 DARDLFDRMPERNVVAWNV----MLDGYVHLSPIEEACKLFDEMPIKNSIS-----WTTI 303
Query: 475 VDILGRAGSLAEAIDLINSMTF 496
+ L RAG L EA DL++ M+F
Sbjct: 304 ISGLARAGKLQEAKDLLDKMSF 325
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 135/278 (48%), Gaps = 19/278 (6%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N ++ +G++ A RLF+ MP ++ V++ M++ + G ++++ LF+ MP ++ V
Sbjct: 22 NKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTV 81
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W A+I+ ++ + +A F M +D + + + ++S A L + +
Sbjct: 82 SWNAMIAALSDHGRVADARSLFDRMPVRD----EFSWTVMVSCYARGGDLELARDV---L 134
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+M + + N+++S Y+K G DA ++ + ++VS+NS ++G Q+G A+
Sbjct: 135 DRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAV 194
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
F +M V + ++ +L+ G + +F +++ P + +++
Sbjct: 195 QFFDEM-----VKDMTSWNLMLAGFVRTGDLNAASSFFAKIES-----PNVISWVTLLNG 244
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
RAG +A+A DL + M E W +L G HL+
Sbjct: 245 YCRAGRIADARDLFDRMP-ERNVVAWNVMLD-GYVHLS 280
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/660 (34%), Positives = 369/660 (55%), Gaps = 59/660 (8%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+N M++ ++N EA+++F MP R+ S+ MIT + R G +A EL
Sbjct: 32 MPRRNLVSWNTMVSGYLHNG-KFDEAYKLFVIMPRRDLFSWTLMITCYTRNGEVEKAREL 90
Query: 61 YVNMPARWRDSV-CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
+ ++P +R V C NA+ISGY+K GR EA R+F+ M K++++W SM+ GY + ++
Sbjct: 91 FDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMR 150
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
E F++M E++VV+W MVDG+++V + + F ++ + + +T+ F G
Sbjct: 151 LGLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAWKFFQETQKPNVV-SWVTMLSGFARNG 209
Query: 180 RFFRYRE-------------GVQVHGLVSRFGFD-----------YDIILGNSIITMYGR 215
R + V R D D + ++I Y R
Sbjct: 210 NILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVR 269
Query: 216 LGFMDEANKVFSMMSKR-------------------------------DAVSWNSLISGY 244
+G +DEA ++ + M R D V WN++I+GY
Sbjct: 270 IGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGY 329
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
H+G I EA L +RM KD V+W TMI+ ++ G +++++++F M E+D V+W ++I+
Sbjct: 330 AHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIA 389
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
GF+ N Q +A + F M + +P+QL+ + LS+ A A L G+Q+H VVK +
Sbjct: 390 GFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLN 449
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
+ + N+L+++Y+KCG +++A +F I +++S+NS+I G+A NG G+EAL LF +M
Sbjct: 450 YLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMA 509
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
EG+ P+++TF+ +LSACNH G+V+ G FK M +Y IEP EHYACMVD+LGR G L
Sbjct: 510 SEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRL 569
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA +++ M + GVWGALLGA R H NL+L +LAA L E EP + YV+LS+++
Sbjct: 570 DEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIH 629
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
+ + + VRM K PGCSW+ ++++VH FL+ S +I VTL +++
Sbjct: 630 AEANRWNEVQEVRMLMNASSTVKEPGCSWVEVRNQVHGFLSD-DSTRSRPDIGVTLASLN 688
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 256/459 (55%), Gaps = 32/459 (6%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
MA++ + +YN+MI+ N I A +F MP RN VS+ M++G++ G F EA +L
Sbjct: 1 MAEKNTVTYNSMISVYAKNG-RINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKL 59
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM---VEKDVVAWGSMVDGYCKKGR 117
+V MP RD +I+ Y + G E+A +F+++ K V W +M+ GY KKGR
Sbjct: 60 FVIMPR--RDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGR 117
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTIL-- 174
V EA+ +FD+MP KN+++W +M+ GY + G + F M R +++N + +
Sbjct: 118 VNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQV 177
Query: 175 --FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
++ +FF+ + V V ++++ + R G + E+ ++F M R
Sbjct: 178 GDLDSAWKFFQETQKPNVVSWV-------------TMLSGFARNGNILESRRLFDQMPSR 224
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
+ VSWN++IS YV EI+EA RLFE MP +D VSWTTMI G+ G L+++ EL N MP
Sbjct: 225 NIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMP 284
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
++ TA+ISG++ + +EA R+F E+ DV + +++++ A +N+
Sbjct: 285 YRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDV----VCWNAMIAGYAHHGRINEALC 340
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+ +V D+ N+++S Y++ G + A +IF + ER++VS+NS+I+GF NG
Sbjct: 341 LSKRMVN----KDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQ 396
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+AL F M EG P+Q++F LS+C + ++ G
Sbjct: 397 NLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVG 435
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 157/293 (53%), Gaps = 20/293 (6%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
NS+I++Y + G ++ A +F M +R+ VSWN+++SGY+HNG+ +EAY+LF MP +D
Sbjct: 10 NSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMPRRDLF 69
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMP---EKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
SWT MIT ++ G +EK+ ELF+ +P K W A+ISG+V + EA R F EM
Sbjct: 70 SWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMP 129
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
K N ++ +S+L A T N+ ++ E DV N +V + + G++
Sbjct: 130 VK----NLISWNSML----AGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLD 181
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A++ F + N+VS+ +M+SGFA+NG E+ LF +M +V + + C
Sbjct: 182 SAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCE 241
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
++E F+ M E + M++ R G L EA +L+N M +
Sbjct: 242 ----IDEASRLFEEMP-----ERDSVSWTTMINGYVRIGKLDEARELLNEMPY 285
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/612 (36%), Positives = 361/612 (58%), Gaps = 44/612 (7%)
Query: 2 ADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
A+ A N +IT L I EA ++F MP R+ VS+ A+ITG+++ GM EA+ L+
Sbjct: 62 ANSNVARSNWLITQL-GKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLF 120
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
A ++ V AL+SGY++ R EEA R+F+AM K+V++W +M++GY +KG + +A
Sbjct: 121 DRNDAI-KNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQA 179
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
++F+KMPE+NVV+W ++ +M+ ++ +LF M
Sbjct: 180 LDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMP--------------------- 218
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+ D+I +++ + G +D+A +F M R+ VSWN++I
Sbjct: 219 ------------------ERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMI 260
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
GY N ++EA++LFE+MP ++ SW TMITGF G LE++++ F M K+ VTWTA
Sbjct: 261 IGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTA 320
Query: 302 IISGFVNNEQYEEAFRWFIEM-LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+ISG V + + EEA + F EM +V+PN+ T SVL A + A L +G QIH + K
Sbjct: 321 VISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKT 380
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTN--IDERNIVSYNSMISGFAQNGLGEEALN 418
+ + ++L+++YSKCG + A +IF + I R++VS+N MI+ +A +G G +A++
Sbjct: 381 VYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAIS 440
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M+ G P+ +T++++LSAC+H GLV+EG F+++ +I+ +H+ C+VD+
Sbjct: 441 LFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLF 500
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L EA D I + +P VW ALL H ++DL KL A+ L+E EP++A Y+
Sbjct: 501 GRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYL 560
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
VLS++Y+ GK R+ VRMK K K ++K PGCSWI + + VH+F+ G S + + I +
Sbjct: 561 VLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYL 620
Query: 599 TLQTISKGTKEF 610
L + K+
Sbjct: 621 LLHDLHTKMKKI 632
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 181/365 (49%), Gaps = 53/365 (14%)
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG----- 248
V F + ++ N +IT G+ G + EA +VF M RD VSW ++I+GY+ G
Sbjct: 57 VRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEA 116
Query: 249 ---------------------------EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNL 281
IEEA RLF+ MP K+ +SW TMI G++ KG +
Sbjct: 117 KTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWI 176
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+++++LF MPE++ V+W +I+ F+ + +EA F M +D V+S +
Sbjct: 177 DQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERD----------VISWT 226
Query: 342 AATATLNQGSQI-HAHVV--KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A L++ +I A ++ KM + + VS N+++ Y++ + +A+++F + ER +
Sbjct: 227 TMVAGLSKNGRIDDARLLFDKMPVRNVVS-WNTMIIGYAQNMRLDEAFKLFEQMPERELS 285
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N+MI+GF QNG E A++ F KM ++ N +T+ +V+S G EE F M
Sbjct: 286 SWNTMITGFIQNGKLERAVDFFYKMSNK----NVVTWTAVISGHVQDGRSEEALKIFSEM 341
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAI---DLINSMTFEPPPGVWGALLGAGRTHLN 515
+ N++P + ++ + +L E +I+ ++ V AL+
Sbjct: 342 QAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGE 401
Query: 516 LDLAK 520
L+LA+
Sbjct: 402 LELAR 406
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R +S+N MIT I N + A + F M +N V++ A+I+G V+ G EA ++
Sbjct: 279 MPERELSSWNTMITGFIQNG-KLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKI 337
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA-----MVEK-------DVVAWGSM 108
+ M A +S +G C + A + E ++ K DVV+ ++
Sbjct: 338 FSEMQAANNVKPNEGTFVS---VLGACSKLAALCEGQQIHQIISKTVYQEVADVVS--AL 392
Query: 109 VDGYCKKGRVIEAREIFD--KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
++ Y K G + AR+IFD + ++VV+W M+ Y LF M+ G
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG----NSIITMYGRLGFMDEA 222
+++T L AC EG+++ + R D I L ++ ++GR G + EA
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVR---DRSIKLREDHFTCLVDLFGRAGRLQEA 509
Query: 223 -NKVFSMMSKRDAVSWNSLISGYVHNGEIE----EAYRLFERMP 261
+ + + K A W +L++G +G I+ A +L E P
Sbjct: 510 FDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEP 553
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+S+LS+ +T + +I + V + S+V+ N L++ K G + +A ++F + +
Sbjct: 37 NSILSSQFSTCQVV--PKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPD 94
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
R++VS+ ++I+G+ + G+ EEA LF + + N +T+ +++S +EE
Sbjct: 95 RDVVSWTAVITGYIKCGMIEEAKTLFDR---NDAIKNVVTWTALVSGYVRWNRIEEARRL 151
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F +M I + M++ R G + +A+DL M
Sbjct: 152 FDAMPVKNVIS-----WNTMIEGYARKGWIDQALDLFEKM 186
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/581 (37%), Positives = 339/581 (58%), Gaps = 68/581 (11%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRR-------GMFYEAEELYVN---------MP 65
S+ EA +F MP++N VS+ AMI + R G FYE +++ + +P
Sbjct: 115 SLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILP 174
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
A C++ + G E I + E +V +VD Y K+G + ARE+F
Sbjct: 175 A------CTDLEVLG-------EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELF 221
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
DKMP+++VV+W AM+ GY++ ED LF + +
Sbjct: 222 DKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPK------------------------ 257
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
D+I N+++ Y + G ++ A ++F M +++ VSWN++I+GYV
Sbjct: 258 ---------------RDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYV 302
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
NG ++EA++LF+ MP ++ +SW +I+GF+ G +E++++LF MPE + V+W A+I+G
Sbjct: 303 QNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAG 362
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+ N Q E A + F +M D++PN T + VL A AA A L QG++ H V++ +SD
Sbjct: 363 YSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSD 422
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
V + N+LV +Y+KCG++ DA ++F + +++ S ++MI G+A NG +E+L LF +M+
Sbjct: 423 VLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQF 482
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
GL P+++TF+ VLSAC H GLV+EG YF M Y+I P EHY CM+D+LGRAG
Sbjct: 483 TGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFD 542
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYS 545
EA DLIN M +P +WG+LL A RTH N+DL + AQHL+ L P + PYV+LS++Y+
Sbjct: 543 EANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYA 602
Query: 546 VIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
G+ D VR + K ++++K GCSWI++K +VH FL G
Sbjct: 603 AAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAFLVG 643
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 221/416 (53%), Gaps = 49/416 (11%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNALISGYLKVGRCEEAARIFEAMVE- 99
++ ++G EA + +M W S ++L+ G L +A + M++
Sbjct: 34 GLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQT 93
Query: 100 ----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
+D+ +V Y K G ++EAR +FD+MP KNVV+WTAM+ Y + + ++
Sbjct: 94 QFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGF 153
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
F M+ G+ N T + AC E H + + GF+ ++ +GN ++ MY +
Sbjct: 154 FYEMQDVGIQPNHFTFASILPACTDLEVLGE---FHDEIVKGGFESNVFVGNGLVDMYAK 210
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGF 275
G ++ A ++F M +RD VSWN++I+GYV NG IE+A +LF+ +P +D ++W TM+ G+
Sbjct: 211 RGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGY 270
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ G++E ++ELF MPE++ V+W +I+G+V N +EAF+ F + P
Sbjct: 271 AQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLF------QIMP------ 318
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
E +V N+++S +++ G V +A ++F + E
Sbjct: 319 ---------------------------ERNVISWNAVISGFAQNGQVEEALKLFKTMPEC 351
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
N+VS+N+MI+G++QNG E AL LF +M+ + PN TF VL AC + ++E+G
Sbjct: 352 NVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQG 407
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 215/406 (52%), Gaps = 16/406 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+NAMI + N I +A ++F +P R+ +++ M+ G+ + G A EL
Sbjct: 224 MPQRDVVSWNAMIAGYVQNGL-IEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVEL 282
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP + + V N +I+GY++ G +EA ++F+ M E++V++W +++ G+ + G+V E
Sbjct: 283 FEKMPEQ--NLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEE 340
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++F MPE NVV+W AM+ GY + E+ LF M+ M N+ T I+ AC
Sbjct: 341 ALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAA 400
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+G + H +V R GF D+++GN+++ MY + G +++A KVF M ++D+ S +++
Sbjct: 401 LAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAM 460
Query: 241 ISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I GY NG +E+ LFE+M D V++ +++ G +++ + F++M
Sbjct: 461 IVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYH 520
Query: 297 VT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+T + +I ++EA +M ++P+ S+LSA ++ G
Sbjct: 521 ITPAMEHYGCMIDLLGRAGCFDEANDLINKM---PIKPDADMWGSLLSACRTHNNIDLGE 577
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
++ H++ +N ++ L ++Y+ G D + + +R +
Sbjct: 578 KVAQHLIALNPQNPAPYV-LLSNIYAAAGRWDDIGSVRNRMKDRKV 622
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 137/264 (51%), Gaps = 17/264 (6%)
Query: 236 SWNSLISGYVHNGEIEEAYRLFERM-----PGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
+++SL+ G ++ + +A L M +D +++ + G+L ++ +F+
Sbjct: 66 TYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDE 125
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP K+ V+WTA+I+ + +E +EA +F EM ++PN T +S+L A L
Sbjct: 126 MPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVL--- 182
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
+ H +VK ES+V + N LV +Y+K G + A +F + +R++VS+N+MI+G+ QN
Sbjct: 183 GEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQN 242
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
GL E+AL LF+++ + IT+ ++++ G VE F+ M E
Sbjct: 243 GLIEDALKLFQEIPKRDV----ITWNTMMAGYAQCGDVENAVELFEKMP-----EQNLVS 293
Query: 471 YACMVDILGRAGSLAEAIDLINSM 494
+ M+ + GS+ EA L M
Sbjct: 294 WNTMIAGYVQNGSVKEAFKLFQIM 317
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/612 (36%), Positives = 360/612 (58%), Gaps = 44/612 (7%)
Query: 2 ADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
A+ A N +IT L I EA ++F MP R+ VS+ A+ITG+++ GM EA+ L+
Sbjct: 62 ANSNVARSNWLITQL-GKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLF 120
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
A ++ V AL+SGY++ R EEA R+F+AM K+V++W +M++GY +KG + +A
Sbjct: 121 DRNDAI-KNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQA 179
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
++F+ MPE+NVV+W ++ +M+ ++ +LF M
Sbjct: 180 LDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMP--------------------- 218
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+ D+I +++ + G +D+A +F M R+ VSWN++I
Sbjct: 219 ------------------ERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMI 260
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
GY N ++EA++LFE+MP ++ SW TMITGF G LE++++ F M K+ VTWTA
Sbjct: 261 IGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTA 320
Query: 302 IISGFVNNEQYEEAFRWFIEM-LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+ISG V + + EEA + F EM +V+PN+ T SVL A + A L +G QIH + K
Sbjct: 321 VISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKT 380
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTN--IDERNIVSYNSMISGFAQNGLGEEALN 418
+ + ++L+++YSKCG + A +IF + I R++VS+N MI+ +A +G G +A++
Sbjct: 381 VYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAIS 440
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M+ G P+ +T++++LSAC+H GLV+EG F+++ +I+ +H+ C+VD+
Sbjct: 441 LFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLF 500
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L EA D I + +P VW ALL H ++DL KL A+ L+E EP++A Y+
Sbjct: 501 GRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYL 560
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
VLS++Y+ GK R+ VRMK K K ++K PGCSWI + + VH+F+ G S + + I +
Sbjct: 561 VLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYL 620
Query: 599 TLQTISKGTKEF 610
L + K+
Sbjct: 621 LLHDLHTKMKKI 632
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 179/365 (49%), Gaps = 53/365 (14%)
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG----- 248
V F + ++ N +IT G+ G + EA +VF M RD VSW ++I+GY+ G
Sbjct: 57 VRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEA 116
Query: 249 ---------------------------EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNL 281
IEEA RLF+ MP K+ +SW TMI G++ KG +
Sbjct: 117 KTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWI 176
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+++++LF MPE++ V+W +I+ F+ + +EA F M +D V+S +
Sbjct: 177 DQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERD----------VISWT 226
Query: 342 AATATLNQGSQIHAHVV---KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A L++ +I + KM + + VS N+++ Y++ + +A+++F + ER +
Sbjct: 227 TMVAGLSKNGRIDDARLLFDKMPVRNVVS-WNTMIIGYAQNMRLDEAFKLFEQMPERELS 285
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N+MI+GF QNG E A++ F KM ++ N +T+ +V+S G EE F M
Sbjct: 286 SWNTMITGFIQNGKLERAVDFFYKMSNK----NVVTWTAVISGHVQDGRSEEALKIFSEM 341
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAI---DLINSMTFEPPPGVWGALLGAGRTHLN 515
+ N++P + ++ + +L E +I+ ++ V AL+
Sbjct: 342 QAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGE 401
Query: 516 LDLAK 520
L+LA+
Sbjct: 402 LELAR 406
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R +S+N MIT I N + A + F M +N V++ A+I+G V+ G EA ++
Sbjct: 279 MPERELSSWNTMITGFIQNG-KLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKI 337
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA-----MVEK-------DVVAWGSM 108
+ M A +S +G C + A + E ++ K DVV+ ++
Sbjct: 338 FSEMQAANNVKPNEGTFVS---VLGACSKLAALCEGQQIHQIISKTVYQEVADVVS--AL 392
Query: 109 VDGYCKKGRVIEAREIFD--KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
++ Y K G + AR+IFD + ++VV+W M+ Y LF M+ G
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG----NSIITMYGRLGFMDEA 222
+++T L AC EG+++ + R D I L ++ ++GR G + EA
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVR---DRSIKLREDHFTCLVDLFGRAGRLQEA 509
Query: 223 -NKVFSMMSKRDAVSWNSLISGYVHNGEIE----EAYRLFERMP 261
+ + + K A W +L++G +G I+ A +L E P
Sbjct: 510 FDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEP 553
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+S+LS+ +T + +I + V + S+V+ N L++ K G + +A ++F + +
Sbjct: 37 NSILSSQFSTCQVV--PKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPD 94
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
R++VS+ ++I+G+ + G+ EEA LF + + N +T+ +++S +EE
Sbjct: 95 RDVVSWTAVITGYIKCGMIEEAKTLFDR---NDAIKNVVTWTALVSGYVRWNRIEEARRL 151
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F +M I + M++ R G + +A+DL M
Sbjct: 152 FDAMPVKNVIS-----WNTMIEGYARKGWIDQALDLFEXM 186
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/617 (37%), Positives = 354/617 (57%), Gaps = 44/617 (7%)
Query: 2 ADRTSASYNAMITALINNN-CSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
D +N I++ + CS EA +F MP ++VSY AMI+G++R G F A L
Sbjct: 55 GDSDIKEWNVAISSYMRTGRCS--EALRVFKRMPRWSSVSYNAMISGYLRNGEFELARML 112
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R D V N +I GY++ +A +FE M E+DV +W +++ GY + G V +
Sbjct: 113 FDEMPER--DLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDD 170
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD+MPEKN V+W A++ Y++ E+ LF S R A S + G
Sbjct: 171 ARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGS--RENWALVSWNCLL-----GG 223
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F + ++ V+ D++ N+IIT Y + G +DEA ++F D +W ++
Sbjct: 224 FVKKKKIVEARQFFDSMKVR-DVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAM 282
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWT------------------------------- 269
+SGY+ N +EEA LF+RMP ++ VSW
Sbjct: 283 VSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWN 342
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
TMITG++ G + ++ LF+ MP++D V+W A+I+G+ + EA R F+ M R+ R
Sbjct: 343 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRL 402
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N+ + SS LS A L G Q+H +VK E+ + N+L+ +Y KCG++ +A +F
Sbjct: 403 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 462
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ ++IVS+N+MI+G++++G GEEAL F MK EGL P+ T ++VLSAC+H GLV+
Sbjct: 463 KEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 522
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+G YF +M Y + P +HYACMVD+LGRAG L EA +L+ +M FEP +WG LLGA
Sbjct: 523 KGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGA 582
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
R H N +LA+ AA + +EP+++ YV+LS+LY+ G+ D ++R++ + K ++K P
Sbjct: 583 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 642
Query: 570 GCSWIILKDKVHLFLAG 586
G SWI +++K H F G
Sbjct: 643 GYSWIEIQNKTHTFSVG 659
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N + S+ S+ ++T T Q SQ + + +SD+ N +S Y + G +A R+F
Sbjct: 25 NANSASNFHSSKSSTQTQIQKSQTKP--LPKSGDSDIKEWNVAISSYMRTGRCSEALRVF 82
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+ + VSYN+MISG+ +NG E A LF +M + LV
Sbjct: 83 KRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLV 122
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/671 (33%), Positives = 382/671 (56%), Gaps = 72/671 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M+ R S+N MI ++NN + EA ++F M R+ S+A MIT + R+GM +A EL
Sbjct: 74 MSQRNLVSWNTMIAGYLHNN-MVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKAREL 132
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIF-------------------------- 94
+ +P + D+ C NA+I+GY K GR ++A ++F
Sbjct: 133 FELVPDKL-DTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGL 191
Query: 95 -----EAMVEKDVVAWGSMVDGY-------------------------------CKKGRV 118
E M E++VV+W MV G+ + G++
Sbjct: 192 AMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKI 251
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+EAR++FD+MP KNVV+W AM+ Y++ ++ LF + + ++ T +
Sbjct: 252 VEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLF----KETPYKDCVSWTTMINGY 307
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
R + E +V+ + D+ ++++ + G +DEA++VFS ++KRDA+ WN
Sbjct: 308 VRVGKLDEAREVYNQMPY----KDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWN 363
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
S+I+GY +G + EA LF +MP K+ VSW TMI+G++ G ++++ E+F M ++ ++
Sbjct: 364 SMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVIS 423
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W ++I+GF+ N Y +A + + M ++ +P+Q T + LS+ A A L G Q+H ++
Sbjct: 424 WNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELIL 483
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K +D+ + N+L+++Y+KCG V A ++F +I+ +++S+NS+ISG+A NG EA
Sbjct: 484 KSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFW 543
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F +M EG VP+++TF+ +LSAC+H GL +G FK M + IEP EHY+C+VD+L
Sbjct: 544 AFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLL 603
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR G L EA +++ M + G+WG+LL A R H N++L K+AA L+ELEP +A+ Y+
Sbjct: 604 GRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYI 663
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
LS++++ G+ D R+R+ + +R K PGCSWI +++++ F++ L + I++
Sbjct: 664 TLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKI 723
Query: 599 TLQTISKGTKE 609
L T+S ++
Sbjct: 724 ILNTLSAHMRD 734
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 230/414 (55%), Gaps = 31/414 (7%)
Query: 50 RRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMV 109
++G EA+ ++ N+ + + N++++ + K GR +A ++F+ M ++++V+W +M+
Sbjct: 29 KQGKIDEAKRVFSNVIHK--NHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMI 86
Query: 110 DGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF--LSMRRGGMAFN 167
GY V EA ++FD M E++ +W M+ Y + E +LF + + +N
Sbjct: 87 AGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWN 146
Query: 168 SITLTILFEACGRF---FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
++ + GRF + E + V LVS NS++ Y + G M A K
Sbjct: 147 AMIAG--YAKKGRFDDAEKVFEKMPVKDLVSY----------NSMLAGYTQNGKMGLAMK 194
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKS 284
F M++R+ VSWN +++G+V+N ++ A+ LFE++P + VSW TM+ GF+ G + ++
Sbjct: 195 FFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEA 254
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+LF+ MP K+ V+W A+I+ +V + Q +EA + F E KD ++ +++++
Sbjct: 255 RKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDC----VSWTTMINGYVRV 310
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L++ +++ + DV+ + +L+S + G + +A ++F+ +++R+ + +NSMI
Sbjct: 311 GKLDEAREVYNQMPY----KDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMI 366
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
+G+ Q+G EALNLFR+M V N +++ +++S G ++ F++M
Sbjct: 367 AGYCQSGRMSEALNLFRQMP----VKNAVSWNTMISGYAQAGEMDRATEIFEAM 416
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 164/292 (56%), Gaps = 18/292 (6%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
NS++T++ + G + +A ++F MS+R+ VSWN++I+GY+HN +EEA++LF+ M +D
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNF 111
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEK-DDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
SW MIT ++ KG LEK+ ELF ++P+K D W A+I+G+ ++++A + F +M K
Sbjct: 112 SWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVK 171
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
D+ ++ +S+L+ + + + + N+ S N +V+ + ++ A
Sbjct: 172 DL----VSYNSMLAGYTQNGKMGLAMKFFERMAERNVVS----WNLMVAGFVNNCDLGSA 223
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+ +F I + N VS+ +M+ GFA++G EA LF +M N +++ ++++A
Sbjct: 224 WELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMP----CKNVVSWNAMIAAYVQD 279
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
++E FK +T Y + M++ R G L EA ++ N M ++
Sbjct: 280 LQIDEAVKLFK--ETPY---KDCVSWTTMINGYVRVGKLDEAREVYNQMPYK 326
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 149/315 (47%), Gaps = 52/315 (16%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
N I G+ G +DEA +VFS + ++ ++NS+++ + NG + +A +LF++M ++ V
Sbjct: 21 NKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLV 80
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
SW TMI G+ +E++ +LF++M E+D+ +W +I+ + E+A F +
Sbjct: 81 SWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELF------E 134
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+ P++L D + N++++ Y+K G DA
Sbjct: 135 LVPDKL--------------------------------DTACWNAMIAGYAKKGRFDDAE 162
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
++F + +++VSYNSM++G+ QNG A+ F +M + +V + ++ C+ +G
Sbjct: 163 KVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCD-LG 221
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WG 504
E F +P + M+ R G + EA L + M P V W
Sbjct: 222 SAWELFEKIP--------DPNAVSWVTMLCGFARHGKIVEARKLFDRM---PCKNVVSWN 270
Query: 505 ALLGAGRTHLNLDLA 519
A++ A L +D A
Sbjct: 271 AMIAAYVQDLQIDEA 285
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
QN + K G + +A R+F+N+ +N +YNSM++ FA+NG +A LF KM L
Sbjct: 20 QNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNL 79
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
V ++ ++++ H +VEE F M N +A M+ R G L +A
Sbjct: 80 V----SWNTMIAGYLHNNMVEEAHKLFDLMAERDNFS-----WALMITCYTRKGMLEKAR 130
Query: 489 DLINSMTFEPPPGVWGALLGA 509
+L + + W A++
Sbjct: 131 ELFELVPDKLDTACWNAMIAG 151
>gi|297744236|emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/599 (37%), Positives = 354/599 (59%), Gaps = 44/599 (7%)
Query: 23 IYEAFEIFATMPMRNA----VSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI 78
+ EA + MP R V + ++++ F + G EA L+ MP R + V NA++
Sbjct: 57 LREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPER--NVVTYNAML 114
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
SGY++ GR +A R FE M E++VV+W S++ G GR+ EARE+F+ MPE+NVV+W +
Sbjct: 115 SGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVVSWNS 174
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG-VQVHGLVSRF 197
M+ G ++ E+ +F M + ++ ++ R E V G+ R
Sbjct: 175 MLVGLIRSGQLEEARRVFNEMP----VKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDR- 229
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW-------------------- 237
+++ S+I+ Y R G + E +F M +R+ VSW
Sbjct: 230 ----NVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALNSM 285
Query: 238 -------NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
NS+I+GY+ G++E+A LF+ +P +D +SWT+MI G+ + G + K+ LFN
Sbjct: 286 SYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNN 345
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP++D V WT ++SG V NE + EA F EM K V P T S +L A+ A A L+QG
Sbjct: 346 MPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQG 405
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q H ++K E D+ +QNSL+S+Y+KCG + DAY IF+ + R+++S+NSMI GF+ +
Sbjct: 406 RQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHH 465
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
GL EAL +F M G PN +TFL +LSAC+H GL+ +G+ F +M ++ I+P EH
Sbjct: 466 GLTSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEH 525
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG-AGRTHLNLDLAKLAAQHLMEL 529
Y CMV++LGRAG + EA + I+ + FEP +WGALLG G +N +A+ AA+ L+EL
Sbjct: 526 YVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIWGALLGVCGFGMINTGVARRAAKRLLEL 585
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
+P +A +VVL ++++ IG++ + ++R + LK +RK PGCSWI+LK + ++FL+G +
Sbjct: 586 DPLNAPAHVVLCNIHASIGQRAEEGQLRKEMGLKGVRKVPGCSWILLKGEPYVFLSGDR 644
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 199/410 (48%), Gaps = 46/410 (11%)
Query: 115 KGRVIEAREIFDKMPEKN----VVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSI 169
+ R+ EAR + D+MP + VV WT+++ + K ++ LF M R + +N++
Sbjct: 54 QQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVTYNAM 113
Query: 170 TLTILFEACGRF---FRYREGVQVHGLVS------------RFG---------FDYDIIL 205
+ CGR R+ E + +VS R G + +++
Sbjct: 114 LSG--YVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVVS 171
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
NS++ R G ++EA +VF+ M + VSWN +I+GY + +EEA LF+ M ++
Sbjct: 172 WNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNV 231
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
V+WT+MI+G+ GN+++ LF MPE++ V+WTA+I GF N Y+EA
Sbjct: 232 VTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEAL--------N 283
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ N + +S+++ L + + + + S S+ N Y G + A
Sbjct: 284 SMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMING----YFNVGQIAKA 339
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+F N+ +R+ V++ M+SG QN L EA LF +M+ +G+ P TF +L A +
Sbjct: 340 CYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAM 399
Query: 446 GLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+++G + MKT + + ++ ++ + + G + +A + + M
Sbjct: 400 AYLDQGRQFHCLLMKTQFEFDLILQN--SLISMYAKCGEIGDAYSIFSKM 447
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/579 (37%), Positives = 345/579 (59%), Gaps = 42/579 (7%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
SYN ++ AL ++ S+ +A +F MP+R++V+Y MI+ G+ A + P +
Sbjct: 102 SYNTLLHALAVSS-SLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEK 160
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
D+V N +++ Y++ GR EEA +F + E DV++W +++ GY + G++ EARE+FD+
Sbjct: 161 --DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDR 218
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
MP ++VV+W MV GY RRG M + LF+A
Sbjct: 219 MPGRDVVSWNIMVSGYA---------------RRGDM----VEARRLFDAAPV------- 252
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
D+ ++++ Y + G ++EA +VF M +R+AVSWN++++ Y+
Sbjct: 253 -------------RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR 299
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
++EA LF MP ++ SW TM+TG++ G LE++ +F+ MP+KD V+W A+++ +
Sbjct: 300 RMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYS 359
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
EE + FIEM R N+ + VLS A A L G Q+H +++
Sbjct: 360 QGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCF 419
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ N+L+++Y KCGN+ DA F ++ER++VS+N+MI+G+A++G G+EAL +F M+
Sbjct: 420 VGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTS 479
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
P+ IT + VL+AC+H GLVE+G YF SM + + PEHY CM+D+LGRAG LAEA
Sbjct: 480 TKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEA 539
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
DL+ M FEP +WGALLGA R H N +L + AA+ + ELEP++A YV+LS++Y+
Sbjct: 540 HDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASS 599
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
GK RD ++R+ + + ++K PG SWI +++KVH F AG
Sbjct: 600 GKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAG 638
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 202/385 (52%), Gaps = 28/385 (7%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN I+ +++ GR +A R+F AM + + +M+ GY GR+ A +F +P +
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDN 100
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++ ++ D LF M +S+T ++ + HGL
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMP----VRDSVTYNVMISSHAN----------HGL 146
Query: 194 VS--RFGFDY----DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
VS R FD D + N ++ Y R G ++EA +F+ ++ D +SWN+L+SGYV
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 206
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
G++ EA LF+RMPG+D VSW M++G++ +G++ ++ LF+ P +D TWTA++SG+
Sbjct: 207 GKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYA 266
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EEA R F M + N ++ +++++A +++ ++ M +V+
Sbjct: 267 QNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKEL----FNMMPCRNVA 318
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
N++++ Y++ G + +A +F + +++ VS+ +M++ ++Q G EE L LF +M G
Sbjct: 319 SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378
Query: 428 LVPNQITFLSVLSACNHVGLVEEGF 452
N+ F VLS C + +E G
Sbjct: 379 EWVNRSAFACVLSTCADIAALECGM 403
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 167/344 (48%), Gaps = 53/344 (15%)
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE------- 251
+ ++I N IT + R G + +A ++F+ M +R ++N++++GY NG +
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 252 ------------------------EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
+A LF+ MP +D V++ MI+ ++ G + +
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F++ PEKD V+W +++ +V N + EEA F DV ++ ++++S +
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV----ISWNALMSGYVQWGKM 209
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
++ ++ + DV N +VS Y++ G++V+A R+F R++ ++ +++SG+
Sbjct: 210 SEARELFDRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGY 265
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP- 466
AQNG+ EEA +F M + N +++ ++++A +++E K L+N+ P
Sbjct: 266 AQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEA-------KELFNMMPC 314
Query: 467 -GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+ M+ +AG L EA + ++M + W A+L A
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/565 (38%), Positives = 352/565 (62%), Gaps = 11/565 (1%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I+EA ++F + ++ S+ +M+ G+ M +A +L+ MP R + + N L+SGY+
Sbjct: 33 IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR--NIISWNGLVSGYM 90
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
K G +EA ++F+ M E++VV+W ++V GY G+V A +F KMPEKN V+WT M+ G
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIG 150
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+++ +D L+ + ++I T + + R E ++ +S +
Sbjct: 151 FLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMS----ERS 202
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+I +++T YG+ +D+A K+F +M ++ VSW S++ GYV NG IE+A LFE MP
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV 262
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K ++ MI+G KG + K+ +F+ M E++D +W +I N EA FI M
Sbjct: 263 KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
++ VRP TL S+LS A+ A+L+ G Q+HA +V+ + DV + + L+++Y KCG +
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSA 441
V + IF ++I+ +NS+ISG+A +GLGEEAL +F +M G PN++TF++ LSA
Sbjct: 383 VKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C++ G+VEEG ++SM++++ ++P HYACMVD+LGRAG EA+++I+SMT EP
Sbjct: 443 CSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAA 502
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VWG+LLGA RTH LD+A+ A+ L+E+EP+++ Y++LS++Y+ G+ D +R K
Sbjct: 503 VWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMK 562
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAG 586
+ +RKSPGCSW +++KVH F G
Sbjct: 563 TRLVRKSPGCSWTEVENKVHAFTRG 587
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 246/547 (44%), Gaps = 95/547 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M DR S+N +++ + N I EA ++F MP RN VS+ A++ G+V G AE L
Sbjct: 74 MPDRNIISWNGLVSGYMKNG-EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP ++ V ++ G+L+ GR ++A +++E + +KD +A SM+ G CK+GRV E
Sbjct: 133 FWKMPE--KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDE 190
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACG 179
AREIFD+M E++V+ WT MV GY + + +D +F M + +++ S+ + + G
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG--YVQNG 248
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
R E +V + +I N++I+ G+ G + +A +VF M +R+ SW +
Sbjct: 249 RIEDAEELFEVMPV-------KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301
Query: 240 LISGYVHNGEIEEAYRLFERMPGK------------------------------------ 263
+I + NG EA LF M +
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 264 ---DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
D + ++T + G L KS +F+ P KD + W +IISG+ ++ EEA + F
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 321 EM-LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
EM L +PN++T + LSA + + +G +I+ +MES ++
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE-----SMESVFGVKP--------- 467
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ A+ Y M+ + G EA+ + M E P+ + S+L
Sbjct: 468 ---ITAH-------------YACMVDMLGRAGRFNEAMEMIDSMTVE---PDAAVWGSLL 508
Query: 440 SAC-NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL----GRAGSLAEAIDLINSM 494
AC H L F K L IEP ++ + GR +AE L+ +
Sbjct: 509 GACRTHSQLDVAEF----CAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
Query: 495 TFEPPPG 501
PG
Sbjct: 565 LVRKSPG 571
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 161/291 (55%), Gaps = 21/291 (7%)
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
N IT R+G + EA K+F + SWNS+++GY N +A +LF+ MP ++
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+SW +++G+ G ++++ ++F++MPE++ V+WTA++ G+V+N + + A F +M K
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
N+++ + +L ++ +++ +M + D + S++ K G V +A
Sbjct: 140 ----NKVSWTVMLIGFLQDGRIDDACKLY----EMIPDKDNIARTSMIHGLCKEGRVDEA 191
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
IF + ER+++++ +M++G+ QN ++A +F M ++ ++++ S+L +
Sbjct: 192 REIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSML-----M 242
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSM 494
G V+ G I + + L+ + P AC M+ LG+ G +A+A + +SM
Sbjct: 243 GYVQNGRI--EDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSM 291
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/582 (37%), Positives = 349/582 (59%), Gaps = 41/582 (7%)
Query: 39 VSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMV 98
+S ++IT + R G +A ++ M R ++ + N++++GY + R +EA +F+ M
Sbjct: 99 ISRNSLITRYSRLGQIEKARVVFDEM--RDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS 156
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
E++ ++W +V GY G + EARE+FD+MPE+NVV+WTAMV GY+K + LF
Sbjct: 157 ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQ 216
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M N ++ T++ + R E ++ ++ + D++ ++I Y ++G
Sbjct: 217 MPEK----NVVSWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGGYCQVGR 268
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
+ EA +F M +R+ VSW ++I+GYV N +++ A +LFE MP K+ VSWT M+ G+++
Sbjct: 269 LVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNC 328
Query: 279 GNLEKSIELFNMMP-------------------------------EKDDVTWTAIISGFV 307
G L+++ ELFN MP EKD+ TW+A+I +
Sbjct: 329 GRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYE 388
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
+A F M R+ +RPN +L SVLS A A L+ G +IHA +V+ + DV
Sbjct: 389 RKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVY 448
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ + L+S+Y KCGN+ A ++F +++V +NS+I+G+AQ+GLG EAL +F M G
Sbjct: 449 VASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSG 508
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
++P+ +TF+ VLSAC++ G V++G F SM+T Y +E EHYACMVD+LGRAG L EA
Sbjct: 509 IMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEA 568
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+DLI M E +WGALLGA RTH+ LDLA++AA+ L+ LEP +A P+++LS++Y+
Sbjct: 569 MDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQ 628
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
G+ D +R + +R+ K PGCSWI+++ KVH F G S
Sbjct: 629 GRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSS 670
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 172/332 (51%), Gaps = 23/332 (6%)
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+++RF II NS+IT Y RLG +++A VF M ++ +SWNS+++GY N +E
Sbjct: 88 VLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQE 147
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A +F++M ++ +SW +++G+ + G + ++ E+F+ MPE++ V+WTA++ G+V
Sbjct: 148 AQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMI 207
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA F +M K+V + L +L + M E DV + ++
Sbjct: 208 SEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEA--------CRLFDMMPEKDVVTRTNM 259
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ Y + G +V+A +F + RN+VS+ +MI+G+ QN + A LF M ++ N+
Sbjct: 260 IGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NE 315
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDL 490
+++ ++L + G ++E L+N P AC M+ G+ G + +A +
Sbjct: 316 VSWTAMLKGYTNCGRLDEA-------SELFNAMPIKSVVACNAMILCFGQNGEVPKARQV 368
Query: 491 INSMTFEPPPGVWGALLGA-GRTHLNLDLAKL 521
+ M E G W A++ R L LD +L
Sbjct: 369 FDQMR-EKDEGTWSAMIKVYERKGLELDALEL 399
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/579 (37%), Positives = 345/579 (59%), Gaps = 42/579 (7%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
SYN ++ AL ++ S+ +A +F MP+R++V+Y MI+ G+ A + P +
Sbjct: 102 SYNTLLHALAVSS-SLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEK 160
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
D+V N +++ Y++ GR EEA +F + E DV++W +++ GY + G++ EARE+FD+
Sbjct: 161 --DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDR 218
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
MP ++VV+W MV GY RRG M + LF+A
Sbjct: 219 MPGRDVVSWNIMVSGYA---------------RRGDM----VEARRLFDAAPV------- 252
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
D+ ++++ Y + G ++EA +VF M +R+AVSWN++++ Y+
Sbjct: 253 -------------RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR 299
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
++EA LF MP ++ SW TM+TG++ G LE++ +F+ MP+KD V+W A+++ +
Sbjct: 300 RMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYS 359
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
EE + FIEM R N+ + VLS A A L G Q+H +++
Sbjct: 360 QGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCF 419
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ N+L+++Y KCGN+ DA F ++ER++VS+N+MI+G+A++G G+EAL +F M+
Sbjct: 420 VGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTS 479
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
P+ IT + VL+AC+H GLVE+G YF SM + + PEHY CM+D+LGRAG LAEA
Sbjct: 480 TKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEA 539
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
DL+ M FEP +WGALLGA R H N +L + AA+ + ELEP++A YV+LS++Y+
Sbjct: 540 HDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASS 599
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
GK RD ++R+ + + ++K PG SWI +++KVH F AG
Sbjct: 600 GKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAG 638
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 202/385 (52%), Gaps = 28/385 (7%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN I+ +++ GR +A R+F AM + + +M+ GY GR+ A +F +P +
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDN 100
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++ ++ D LF M +S+T ++ + HGL
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMP----VRDSVTYNVMISSHAN----------HGL 146
Query: 194 VS--RFGFDY----DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
VS R FD D + N ++ Y R G ++EA +F+ ++ D +SWN+L+SGYV
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 206
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
G++ EA LF+RMPG+D VSW M++G++ +G++ ++ LF+ P +D TWTA++SG+
Sbjct: 207 GKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYA 266
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EEA R F M + N ++ +++++A +++ ++ M +V+
Sbjct: 267 QNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKEL----FNMMPCRNVA 318
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
N++++ Y++ G + +A +F + +++ VS+ +M++ ++Q G EE L LF +M G
Sbjct: 319 SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378
Query: 428 LVPNQITFLSVLSACNHVGLVEEGF 452
N+ F VLS C + +E G
Sbjct: 379 EWVNRSAFACVLSTCADIAALECGM 403
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 166/341 (48%), Gaps = 53/341 (15%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE---------- 251
++I N IT + R G + +A ++F+ M +R ++N++++GY NG +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 252 ---------------------EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
+A LF+ MP +D V++ MI+ ++ G + + F++
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
PEKD V+W +++ +V N + EEA F DV ++ ++++S +++
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV----ISWNALMSGYVQWGKMSEA 212
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
++ + DV N +VS Y++ G++V+A R+F R++ ++ +++SG+AQN
Sbjct: 213 RELFDRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQN 268
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP--GP 468
G+ EEA +F M + N +++ ++++A +++E K L+N+ P
Sbjct: 269 GMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEA-------KELFNMMPCRNV 317
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+ M+ +AG L EA + ++M + W A+L A
Sbjct: 318 ASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+E +V N ++ + + G V DA R+F + R+ +YN+M++G++ NG A +LFR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 422 KMKDEGLVPNQITFLSVLSA 441
+ P+ ++ ++L A
Sbjct: 94 AIPR----PDNYSYNTLLHA 109
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/582 (37%), Positives = 349/582 (59%), Gaps = 41/582 (7%)
Query: 39 VSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMV 98
+S ++IT + R G +A ++ M R ++ + N++++GY + R +EA +F+ M
Sbjct: 99 ISRNSLITRYSRLGQIEKARVVFDEM--RDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS 156
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
E++ ++W +V GY G + EARE+FD+MPE+NVV+WTAMV GY+K + LF
Sbjct: 157 ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQ 216
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M N ++ T++ + R E ++ ++ + D++ ++I Y ++G
Sbjct: 217 MPEK----NVVSWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGGYCQVGR 268
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
+ EA +F M +R+ VSW ++I+GYV N +++ A +LFE MP K+ VSWT M+ G+++
Sbjct: 269 LVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNC 328
Query: 279 GNLEKSIELFNMMP-------------------------------EKDDVTWTAIISGFV 307
G L+++ ELFN MP EKD+ TW+A+I +
Sbjct: 329 GRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYE 388
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
+A F M R+ +RPN +L SVLS A A L+ G +IHA +V+ + DV
Sbjct: 389 RKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVY 448
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ + L+S+Y KCGN+ A ++F +++V +NS+I+G+AQ+GLG EAL +F M G
Sbjct: 449 VASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSG 508
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
++P+ +TF+ VLSAC++ G V++G F SM+T Y +E EHYACMVD+LGRAG L EA
Sbjct: 509 IMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEA 568
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+DLI M E +WGALLGA RTH+ LDLA++AA+ L+ LEP +A P+++LS++Y+
Sbjct: 569 MDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQ 628
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
G+ D +R + +R+ K PGCSWI+++ KVH F G S
Sbjct: 629 GRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSS 670
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 172/332 (51%), Gaps = 23/332 (6%)
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+++RF II NS+IT Y RLG +++A VF M ++ +SWNS+++GY N +E
Sbjct: 88 VLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQE 147
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A +F++M ++ +SW +++G+ + G + ++ E+F+ MPE++ V+WTA++ G+V
Sbjct: 148 AQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMI 207
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA F +M K+V + L +L + M E DV + ++
Sbjct: 208 SEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEA--------CRLFDMMPEKDVVTRTNM 259
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ Y + G +V+A +F + RN+VS+ +MI+G+ QN + A LF M ++ N+
Sbjct: 260 IGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NE 315
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDL 490
+++ ++L + G ++E L+N P AC M+ G+ G + +A +
Sbjct: 316 VSWTAMLKGYTNCGRLDEA-------SELFNAMPIKSVVACNAMILCFGQNGEVPKARQV 368
Query: 491 INSMTFEPPPGVWGALLGA-GRTHLNLDLAKL 521
+ M E G W A++ R L LD +L
Sbjct: 369 FDQMR-EKDEGTWSAMIKVYERKGLELDALEL 399
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/579 (37%), Positives = 344/579 (59%), Gaps = 42/579 (7%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
SYN ++ AL ++ S+ +A +F MP+R++V+Y MI+ G+ A + P +
Sbjct: 102 SYNTLLHALAVSS-SLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEK 160
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
D+V N +++ Y++ GR EEA +F + E D ++W +++ GY + G++ EARE+FD+
Sbjct: 161 --DAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDR 218
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
MP ++VV+W MV GY RRG M + LF+A
Sbjct: 219 MPGRDVVSWNIMVSGYA---------------RRGDM----VEARRLFDAAPV------- 252
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
D+ ++++ Y + G ++EA +VF M +R+AVSWN++++ Y+
Sbjct: 253 -------------RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQR 299
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
++EA LF MP ++ SW TM+TG++ G LE++ +F+ MP+KD V+W A+++ +
Sbjct: 300 RMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYS 359
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
EE + FIEM R N+ + VLS A A L G Q+H +++
Sbjct: 360 QGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCF 419
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ N+L+++Y KCGN+ DA F ++ER++VS+N+MI+G+A++G G+EAL +F M+
Sbjct: 420 VGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTS 479
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
P+ IT + VL+AC+H GLVE+G YF SM + + PEHY CM+D+LGRAG LAEA
Sbjct: 480 TKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEA 539
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
DL+ M FEP +WGALLGA R H N +L + AA+ + ELEP++A YV+LS++Y+
Sbjct: 540 HDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASS 599
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
GK RD ++R+ + + ++K PG SWI +++KVH F AG
Sbjct: 600 GKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAG 638
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 203/385 (52%), Gaps = 28/385 (7%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN I+ +++ GR +A R+F AM + + +M+ GY GR+ A +F +P +
Sbjct: 41 SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDN 100
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++ ++ D LF M +S+T ++ + HGL
Sbjct: 101 YSYNTLLHALAVSSSLADARGLFDEMP----VRDSVTYNVMISSHAN----------HGL 146
Query: 194 VS--RFGFDY----DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
VS R FD D + N ++ Y R G ++EA +F+ ++ DA+SWN+L+SGYV
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQW 206
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
G++ EA LF+RMPG+D VSW M++G++ +G++ ++ LF+ P +D TWTA++SG+
Sbjct: 207 GKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYA 266
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EEA R F M + N ++ +++++A +++ ++ M +V+
Sbjct: 267 QNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKEL----FNMMPCRNVA 318
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
N++++ Y++ G + +A +F + +++ VS+ +M++ ++Q G EE L LF +M G
Sbjct: 319 SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378
Query: 428 LVPNQITFLSVLSACNHVGLVEEGF 452
N+ F VLS C + +E G
Sbjct: 379 EWVNRSAFACVLSTCADIAALECGM 403
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 165/341 (48%), Gaps = 53/341 (15%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE---------- 251
++I N IT + R G + +A ++F+ M +R ++N++++GY NG +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 252 ---------------------EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
+A LF+ MP +D V++ MI+ ++ G + + F++
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDL 156
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
PEKD V+W +++ +V N + EEA F D ++ ++++S +++
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDA----ISWNALMSGYVQWGKMSEA 212
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
++ + DV N +VS Y++ G++V+A R+F R++ ++ +++SG+AQN
Sbjct: 213 RELFDRMPG----RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQN 268
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP--GP 468
G+ EEA +F M + N +++ ++++A +++E K L+N+ P
Sbjct: 269 GMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEA-------KELFNMMPCRNV 317
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+ M+ +AG L EA + ++M + W A+L A
Sbjct: 318 ASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+E +V N ++ + + G V DA R+F + R+ +YN+M++G++ NG A +LFR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 422 KMKDEGLVPNQITFLSVLSA 441
+ P+ ++ ++L A
Sbjct: 94 AIPR----PDNYSYNTLLHA 109
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/593 (37%), Positives = 346/593 (58%), Gaps = 41/593 (6%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
EA +F MP ++VSY MI+G++R G F A +L+ MP R D V N +I GY++
Sbjct: 82 EALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER--DLVSWNVMIKGYVRN 139
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
+A +FE M E+DV +W +M+ GY + G V +AR +FD+MPEKN V+W A++ Y+
Sbjct: 140 RNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYV 199
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
+ E+ LF S R A S + G F + ++ V+ D++
Sbjct: 200 QNSKMEEACMLFKS--RENWALVSWNCLL-----GGFVKKKKIVEARQFFDSMNV-RDVV 251
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
N+IIT Y + G +DEA ++F +D +W +++SGY+ N +EEA LF++MP ++
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN 311
Query: 265 FVSWT-------------------------------TMITGFSSKGNLEKSIELFNMMPE 293
VSW TMITG++ G + ++ LF+ MP+
Sbjct: 312 EVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+D V+W A+I+G+ + EA R F++M R+ R N+ + SS LS A L G Q+
Sbjct: 372 RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H +VK E+ + N+L+ +Y KCG++ +A +F + ++IVS+N+MI+G++++G G
Sbjct: 432 HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFG 491
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
E AL F MK EGL P+ T ++VLSAC+H GLV++G YF +M Y + P +HYAC
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDS 533
MVD+LGRAG L +A +L+ +M FEP +WG LLGA R H N +LA+ AA + +EP++
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 611
Query: 534 ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ YV+LS+LY+ G+ D ++R++ + K ++K PG SWI +++K H F G
Sbjct: 612 SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVG 664
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 231/482 (47%), Gaps = 63/482 (13%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ D+ W + Y + GR EA +F +MP + V++ M+ GY++ FE LF
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M + ++ ++ + + R R + L + D+ N++++ Y + G
Sbjct: 121 MPERDL----VSWNVMIKG---YVRNRNLGKARELFEIMP-ERDVCSWNTMLSGYAQNGC 172
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL---------------------- 256
+D+A VF M +++ VSWN+L+S YV N ++EEA L
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 257 ---------FERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
F+ M +D VSW T+ITG++ G ++++ +LF+ P +D TWTA++SG++
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EEA F +M + N+++ +++L+ + ++ + N VS
Sbjct: 293 QNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRN----VS 344
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
N++++ Y++CG + +A +F + +R+ VS+ +MI+G++Q+G EAL LF +M+ EG
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN-IEPGPEHYACMVD-----ILGRA 481
N+ +F S LS C V +E G K L+ + G C V + +
Sbjct: 405 GRLNRSSFSSALSTCADVVALELG-------KQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVV 539
GS+ EA DL M + W ++ H ++A + + L+PD AT V
Sbjct: 458 GSIEEANDLFKEMAGKDIVS-WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 540 LS 541
LS
Sbjct: 517 LS 518
>gi|357482291|ref|XP_003611431.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512766|gb|AES94389.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 735
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/612 (38%), Positives = 365/612 (59%), Gaps = 15/612 (2%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+ AM++ I +A ++F MP RN VS+ +M+ G +R G EA ++
Sbjct: 129 MPERNVVSWTAMLSGYAGLGW-IDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKV 187
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ + P + + V NA+I GY++ GR ++A +F+ + ++V+ W SM+ GYC+ G V E
Sbjct: 188 FDDTPDK--NVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDVNE 245
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACG 179
A +F MPEKNVV+WTAM+ G+ + + LFL M A N T L AC
Sbjct: 246 AFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACA 305
Query: 180 RFFRYREGVQVHG--LVSRFGFD-YDIILGNSIITMYGRLGFMDEANKVFSM-MSKRDAV 235
G Q+H +++R+ D YD LG S++ MY G MD A VF M D
Sbjct: 306 GMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQ 365
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE-- 293
S+NS+I+GYV G++ +A LF+ +P ++ ++WT MI+G+ S G + K+ LF+ MP+
Sbjct: 366 SFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSD 425
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
KD + WT +I G+V NE EA F EM+ + P T + + A + A L+ G Q+
Sbjct: 426 KDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQL 485
Query: 354 HAHVVKM--NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
HA +K E DV ++NSL+S+Y+KCG + DAYRIF+N++ R+ +S+NSMI G + +G
Sbjct: 486 HAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSDHG 545
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
EALN++ M + G+ P+ +TFL VL+AC H G V++G F M Y ++PG EHY
Sbjct: 546 RANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHY 605
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG-AGRTHLNLDLAKLAAQHLMELE 530
+++ILGRAG + +A + + + EP +WGAL+G G + + D+A+ AA L+EL+
Sbjct: 606 VSIINILGRAGRVKDAEEFVLRLPVEPNHTIWGALIGVCGLSKTDADIARRAATRLLELD 665
Query: 531 PDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSC 590
P +A +V L ++Y+ + + +R + ++K +RK+PGCSWI++K KVH F +G +
Sbjct: 666 PLNAPGHVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGCSWILVKGKVHAFSSGDR-- 723
Query: 591 LDLKEIEVTLQT 602
LD E+ LQ+
Sbjct: 724 LDPLAEEMLLQS 735
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 256/560 (45%), Gaps = 110/560 (19%)
Query: 20 NCSIYEAFEIFATMPMRN----AVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN 75
N ++EA I + P N V + +M+T + + G +A L+ MP R + V N
Sbjct: 50 NGFLHEARTILHSFPSGNIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHR--NIVTYN 107
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
A++S YL+ G +A R F+ M E++VV+W +M+ GY G + +AR++FD+MPE+NVV+
Sbjct: 108 AMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVVS 167
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W +MV G ++ E+ +F
Sbjct: 168 WNSMVVGLIRNGDLEEARKVFDDTP----------------------------------- 192
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
D +++ N++I Y G MD+A +F + R+ ++W S+ISGY G++ EA+R
Sbjct: 193 ----DKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDVNEAFR 248
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
LF+ MP K+ VSWT MI GF+ W +GF Y EA
Sbjct: 249 LFQIMPEKNVVSWTAMIGGFA----------------------W----NGF-----YREA 277
Query: 316 FRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV----KMNMESDVSIQN 370
F++M+ D +PN+ T S++ A A G Q+HA ++ K++ + D +
Sbjct: 278 LLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLD-DYDCRLGR 336
Query: 371 SLVSLYSKCGNVVDAYRIF----TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
SLV +YS CG + A +F N D++ S+NSMI+G+ Q G +A LF D
Sbjct: 337 SLVRMYSVCGLMDSARSVFEGDMKNCDDQ---SFNSMINGYVQAGQLHKAQELF----DT 389
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS--L 484
+ N+I + ++S G V + F M + + A + I G + +
Sbjct: 390 VPIRNKIAWTCMISGYLSAGQVLKASNLFDDMP-----DSDKDSIAWTLMIYGYVQNELI 444
Query: 485 AEAIDLINSMTFE---PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV-- 539
AEAI+L M + P + L GA + LDL H M+L+ Y V
Sbjct: 445 AEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLG--WQLHAMQLKTIYEYEYDVYL 502
Query: 540 ---LSDLYSVIGKKRDGNRV 556
L +Y+ G+ D R+
Sbjct: 503 ENSLISMYAKCGEIEDAYRI 522
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/568 (37%), Positives = 345/568 (60%), Gaps = 11/568 (1%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
D+ +A YNAMI+ N +A ++ MP + S+ + + G + G A + +
Sbjct: 140 DKCTACYNAMISGYAKNG-RFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFD 198
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
M + D V N ++ G+++ G + AA F + +VV+W ++++GYC+ GR+ +AR
Sbjct: 199 EMVEK--DMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDAR 256
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
++FD+MPE+NVVA M+DGY+++ E+ LF M NSI+ T + R
Sbjct: 257 DLFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEMP----GKNSISWTTIISGLARAG 312
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+ +E L+ + F+ + +++ Y + +++A ++F M D V WN++IS
Sbjct: 313 KLQE---AKDLLDKMSFNC-VAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMIS 368
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
GYV G +EEA LF+RMP KD VSW TMI G++ G + K+I +F M K+ V+W ++
Sbjct: 369 GYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSV 428
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
ISGFV N + +AF F+ M R R + T +S L A A A L+ G Q+H+ +V+
Sbjct: 429 ISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVRSGH 488
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+D+ +N+L+S Y+KCG +++A +IF + ++IVS+N+++ G+A NG G EA+++FR+
Sbjct: 489 INDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNALVDGYASNGQGTEAISVFRE 548
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
M+ G+ P+++TF+ +LSAC+ GL++EG +F SM Y+++P EHYACM D+LGRAG
Sbjct: 549 MEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAG 608
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L EA +L+ M +P GVWGALLGA + + N +LA+LAA+ L ELEP A+ YV+LS+
Sbjct: 609 KLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARLAAEKLSELEPCRASNYVLLSN 668
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
+ + GK + + R K K K PG
Sbjct: 669 ISAEAGKWDEAEKARASIKEKGANKPPG 696
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 232/452 (51%), Gaps = 27/452 (5%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F +MP RN V+Y +M++ R G EA L+ MP+R ++V NA+I+ G
Sbjct: 37 ARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPSR--NAVSWNAMIAALSDHG 94
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAWTAMVDGYM 144
R +A +F+ M +D +W MV Y + G + AR++ D+MP +K + AM+ GY
Sbjct: 95 RVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNAMISGYA 154
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
K F+D L M + + L L ++ G+ R VQ + + D++
Sbjct: 155 KNGRFDDAVKLLREMPAPDLFSWNSALAGLTQS-GQMVR---AVQFFDEM----VEKDMV 206
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
N ++ + R G +D A F + + VSW +L++GY G I +A LF+RMP ++
Sbjct: 207 SWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRMPERN 266
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
V+ M+ G+ LE++ +LF+ MP K+ ++WT IISG + +EA
Sbjct: 267 VVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLARAGKLQEA--------- 317
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIH-AHVVKMNME-SDVSIQNSLVSLYSKCGNV 382
KD+ ++++ + V + +A Q + ++ A + ME D N+++S Y + G +
Sbjct: 318 KDL-LDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMISGYVQRGML 376
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+A +F + ++ VS+N+MI+G+AQ G +A+ +FR+M + N +++ SV+S
Sbjct: 377 EEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRK----NTVSWNSVISGF 432
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
GL + F +F M+ N + +C+
Sbjct: 433 VQNGLFVDAFHHFMLMRRGTNRADWSTYASCL 464
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 158/331 (47%), Gaps = 59/331 (17%)
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ N +T R G + A ++F M +R+ V++NS++S +G I+EA LF+ MP
Sbjct: 18 VFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPS 77
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT---------------------- 300
++ VSW MI S G + + LF+ MP +DD +WT
Sbjct: 78 RNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRM 137
Query: 301 ----------AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
A+ISG+ N ++++A +++LR+ P+ + +S L+ + + +
Sbjct: 138 PGDKCTACYNAMISGYAKNGRFDDA----VKLLREMPAPDLFSWNSALAGLTQSGQMVRA 193
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q +V E D+ N ++ + + G++ A F I+ N+VS+ ++++G+ +
Sbjct: 194 VQFFDEMV----EKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRA 249
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK---TLYNIEPG 467
G +A +LF +M + +V ACN ++ +G++ ++ L++ PG
Sbjct: 250 GRISDARDLFDRMPERNVV-----------ACN---VMLDGYVRLSRLEEACKLFDEMPG 295
Query: 468 PE--HYACMVDILGRAGSLAEAIDLINSMTF 496
+ ++ L RAG L EA DL++ M+F
Sbjct: 296 KNSISWTTIISGLARAGKLQEAKDLLDKMSF 326
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N ++ ++ G + A R+F ++ RN V+YNSM+S A++G +EA LF M
Sbjct: 22 NQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPSR--- 78
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
N +++ ++++A + G V + F M + + + MV RAG L A D
Sbjct: 79 -NAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFS-----WTVMVSCYARAGELELARD 132
Query: 490 LINSMTFEPPPGVWGALL 507
+++ M + + A++
Sbjct: 133 VLDRMPGDKCTACYNAMI 150
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/594 (37%), Positives = 349/594 (58%), Gaps = 48/594 (8%)
Query: 30 FATMPMRNAVSYAAMITG-----FVRRGMFYEAEELYVNMPARWRDSVCS-NALISGYLK 83
F +P R+ S +A IT F R G A ++ ++ ++ +V S NA+++GY
Sbjct: 3 FRLIPYRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSK---TVTSWNAIVAGYFH 59
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
R EA ++F+ M E++ ++W +V GY K G + EAR++FDKMPE+NVV+WT+MV GY
Sbjct: 60 NKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGY 119
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
++ ++ LF M N ++ T++ R E ++ ++ D+
Sbjct: 120 VQEGLIDEAELLFWRMPEK----NVVSWTVMLGGLIEDGRVDEARRLFDMIPV----KDV 171
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+ ++I G + EA ++F M +R+ V+W S+ISGY N +++ A +LFE MP K
Sbjct: 172 VASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDK 231
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMP------------------------------- 292
+ V+WT M+ G++ G + ++ ELF MP
Sbjct: 232 NEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMK 291
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
EKDD TW+A+I + EA F M R+ VRPN ++ S+LS + A+L+ G Q
Sbjct: 292 EKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQ 351
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H+ +V+ + + D+ + + L+++Y KCG++V R+F ++IV +NS+I+G+AQ+G
Sbjct: 352 VHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGF 411
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
GE+AL +F +M G P++ITF+ VLSAC + G V+EG F+SMK+ Y ++ EHYA
Sbjct: 412 GEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYA 471
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
CMVD+LGRAG L EA++LI +M E VWGALL A RTH NLDLA++AA+ L++LEP
Sbjct: 472 CMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPS 531
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
SA PY++LS+LY+ + +D +R + + + KSPGCSWI + +KVH+F G
Sbjct: 532 SAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGG 585
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 9/291 (3%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
T +I CS + EA EIF MP RN V++ +MI+G+ A +L+ MP + +
Sbjct: 175 TNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDK--N 232
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
V A++ GY + GR EAA +F+AM K V A M+ G+ G V +AR +FD+M E
Sbjct: 233 EVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKE 292
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K+ W+A++ Y + + LF M+R G+ N ++ + CG G QV
Sbjct: 293 KDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQV 352
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + R FD DI + + +ITMY + G + +VF S +D V WNS+I+GY +G
Sbjct: 353 HSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFG 412
Query: 251 EEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
E+A +F M D +++ +++ G +++ +E+F M K V
Sbjct: 413 EKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQV 463
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 343/566 (60%), Gaps = 17/566 (3%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
++ +A YN MI+ N +A + MP + VS+ +++ G +R + + +
Sbjct: 133 EKCAACYNTMISGYAKNG-RFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFD 191
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
MP + D V N ++ GY++ G + A+ F + +V++W ++V+GYC+ GR+ EAR
Sbjct: 192 EMPDK--DLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEAR 249
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
E+FD+MPE+NVVAW ++ GY++ E ++LF+ M NSI+ T + R
Sbjct: 250 ELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEK----NSISWTTMVSGFVRSG 305
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL--GFMDEANKVFSMMSKRDAVSWNSL 240
+ +E V +S+ D +G M+G L +D+A ++F + RDAV WN++
Sbjct: 306 KLQEAKDV---LSKMPSDN---VGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTM 359
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
ISGYV G ++EA LF++MP KD +SW TMI G + G + K+ +F M ++ V+W
Sbjct: 360 ISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWN 419
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+IISGFV N + EA + F+ M R + T + LSASA ATL G Q H+ +V+
Sbjct: 420 SIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRT 479
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
SD S N+L+S Y+KCG +++A ++F + ++IVS+N++I G+A NG G E + +F
Sbjct: 480 GFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVF 539
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
R+M+ + P++IT + VLSAC+H GL++EG +F SM LY+++P EHY CMVD+LGR
Sbjct: 540 REMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGR 599
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA +L+ M +P GVWGALLGA R H N ++A LAA+ L ELEP A+ YV+L
Sbjct: 600 AGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLL 659
Query: 541 SDLYSVIGKKRDGNRVR--MKKKLKR 564
S++ GK D ++VR MK+ + R
Sbjct: 660 SNICVEAGKWDDADKVRVLMKESILR 685
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 231/455 (50%), Gaps = 32/455 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N +T+L + + A +F MP RN VSY AM++ G EA L+ MP R
Sbjct: 15 NQELTSLARSG-QLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR--R 71
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
+ V N ++ + GR E+A +F+AM ++ +W MV Y + G + ARE+ D+MP
Sbjct: 72 NPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMP 131
Query: 130 -EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM-AFNSITLTILFEACGRFFRYRE- 186
EK + M+ GY K FED L M + ++NS+ G R E
Sbjct: 132 GEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVL--------GGLIRNEEI 183
Query: 187 --GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
VQ + D D++ N ++ Y R G +D A+ FS + + +SW +L++GY
Sbjct: 184 SRSVQFFDEMP----DKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGY 239
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
G + EA LF+RMP ++ V+W +++G+ +E + LF MPEK+ ++WT ++S
Sbjct: 240 CQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVS 299
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
GFV + + +EA ++L K N ++++ + ++ Q+ +V
Sbjct: 300 GFVRSGKLQEA----KDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVV----R 351
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D N+++S Y +CG + +A +F + ++++S+N+MI+G AQ G +A ++FRKMK
Sbjct: 352 DAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMK 411
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
N +++ S++S GL E +F M+
Sbjct: 412 RR----NTVSWNSIISGFVQNGLFVEALQHFMLMR 442
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 150/329 (45%), Gaps = 59/329 (17%)
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ N +T R G + A ++F M +R+ VS+N+++S H+G + EA RLF+ MP
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT---------------------- 300
++ VSW TM+ S G +E + LF+ MP +++ +WT
Sbjct: 71 RNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRM 130
Query: 301 ----------AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+ISG+ N ++E+A I +L++ P+ ++ +SVL +++
Sbjct: 131 PGEKCAACYNTMISGYAKNGRFEDA----IALLQEMPAPDIVSWNSVLGGLIRNEEISRS 186
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q + + D+ N ++ Y + G++ A F+ I N++S+ ++++G+ Q
Sbjct: 187 VQFFDEMP----DKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQA 242
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI-----E 465
G EA LF +M + +V + G++ F ++ YN+ E
Sbjct: 243 GRMGEARELFDRMPERNVVAWNVLL--------------SGYVQFSQVEAAYNLFIEMPE 288
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ MV R+G L EA D+++ M
Sbjct: 289 KNSISWTTMVSGFVRSGKLQEAKDVLSKM 317
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N ++ ++ G + A R+F + RN+VSYN+M+S A +G EA LF +M
Sbjct: 15 NQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRR--- 71
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA--CMVDILGRAGSLAEA 487
N +++ +++ AC+ G VE+ + L++ P Y+ MV RAG L A
Sbjct: 72 -NPVSWNTMMVACSQHGRVEDA-------RGLFDAMPARNEYSWTIMVSCYVRAGELTLA 123
Query: 488 IDLINSMTFEPPPGVWGALL 507
+L++ M E + ++
Sbjct: 124 RELLDRMPGEKCAACYNTMI 143
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/580 (38%), Positives = 347/580 (59%), Gaps = 17/580 (2%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM-VEKDV 102
MIT + G EA L+ M R D + +ISGY+K G EEA R+F+ + +K+V
Sbjct: 58 MITNLSKDGRIMEARRLFDEM--REPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNV 115
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RR 161
V W +MV GY + ++ +A ++F++MP KNVV+W M+DGY + + LF M R
Sbjct: 116 VTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPER 175
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+++N T+ + CGR R L R + D+I ++I + G +DE
Sbjct: 176 NVVSWN--TVMSMLAQCGRIEEARR------LFDRMP-ERDVISWTAMIAGLSKNGRIDE 226
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNL 281
A +F M +R+ VSWN++I+GY N ++EA LFERMP +D SW TMITG G+L
Sbjct: 227 ARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDL 286
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSA 340
++ +LFN MP+K+ ++WT +I+G V + EEA + F ML + +PNQ T SVL A
Sbjct: 287 RRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGA 346
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN--IDERNIV 398
+ A L +G Q+H + K + + ++L+++YSKCG + A ++F + +R++V
Sbjct: 347 CSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLV 406
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N +I+ +A +G G+EA+N F++M+ G P+ +T++ +LSAC+H GLVEEG YF +
Sbjct: 407 SWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDEL 466
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+I +HYAC+VD+ GRAG L EA I + +P VWGALL H N+ +
Sbjct: 467 VKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKI 526
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
K AA+ L+E+EP++A Y++LS++Y+ GK R+ RVR+K K K ++K PGCSWI + +
Sbjct: 527 GKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGN 586
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDW 617
+VH+F+ G KS K I L+ + K+ + P +D+
Sbjct: 587 RVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPNNDF 626
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 213/441 (48%), Gaps = 52/441 (11%)
Query: 1 MADRTSASYNAMITALINNNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
M +R S+N +++ L C I EA +F MP R+ +S+ AMI G + G EA
Sbjct: 172 MPERNVVSWNTVMSMLAQ--CGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARL 229
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
L+ MP R+ V NA+I+GY + R +EA +FE M E+D+ +W +M+ G + G +
Sbjct: 230 LFDRMPE--RNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLR 287
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEAC 178
AR++F++MP+KNV++WT M+ G ++ E+ +F M G N T + AC
Sbjct: 288 RARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGAC 347
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF--SMMSKRDAVS 236
EG QVH ++S+ + + +++I MY + G + A K+F M S+RD VS
Sbjct: 348 SNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVS 407
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMP 292
WN +I+ Y H+G +EA F+ M F V++ +++ S G +E+ ++ F+ +
Sbjct: 408 WNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELV 467
Query: 293 EKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
+ + + ++ + +EAF FIE L + +P+ ++L+ A +
Sbjct: 468 KDRSILVREDHYACLVDLCGRAGRLKEAFG-FIERL--ETKPSARVWGALLAGCNVHANV 524
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
G Q ++++ E+ Y + +NI +
Sbjct: 525 KIGKQAAKKLLEVEPEN------------------AGTYLLLSNI--------------Y 552
Query: 408 AQNGLGEEALNLFRKMKDEGL 428
A G EA + KMKD+GL
Sbjct: 553 ASTGKWREAARVRLKMKDKGL 573
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 186/361 (51%), Gaps = 27/361 (7%)
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
F D ++ N +IT + G + EA ++F M + D ++W ++ISGY+ G IEEA RL
Sbjct: 46 FTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRL 105
Query: 257 FERMPG-KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
F+R+ K+ V+WT M+ G+ + + +LFN MP K+ V+W +I G+ N + + A
Sbjct: 106 FDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSA 165
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F +M ++V ++ ++V+S A + + ++ + E DV ++++
Sbjct: 166 MYLFEKMPERNV----VSWNTVMSMLAQCGRIEEARRLFDRMP----ERDVISWTAMIAG 217
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
SK G + +A +F + ERN+VS+N+MI+G+AQN +EAL+LF +M + L P+ T
Sbjct: 218 LSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDL-PSWNTM 276
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE--HYACMVDILGRAGSLAEAIDLINS 493
++ GL++ G + + + L+N P + M+ + G EA+ + +
Sbjct: 277 IT--------GLIQNGDL--RRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSR 326
Query: 494 MT----FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME-LEPDSATPYVVLSDLYSVIG 548
M +P G + ++LGA L + Q + + + DS L ++YS G
Sbjct: 327 MLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCG 386
Query: 549 K 549
+
Sbjct: 387 E 387
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 330/554 (59%), Gaps = 41/554 (7%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAAR 92
MP+R++V+Y MI+ G+ A + P + D+V N +++ Y++ GR EEA
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEK--DAVSWNGMLAAYVRNGRVEEARG 58
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
+F + E DV++W +++ GY + G++ EARE+FD+MP ++VV+W MV GY
Sbjct: 59 LFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYA-------- 110
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
RRG M + LF+A D+ ++++
Sbjct: 111 -------RRGDM----VEARRLFDAAPV--------------------RDVFTWTAVVSG 139
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMI 272
Y + G ++EA +VF M +R+AVSWN++++ Y+ ++EA LF MP ++ SW TM+
Sbjct: 140 YAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTML 199
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
TG++ G LE++ +F+ MP+KD V+W A+++ + EE + FIEM R N+
Sbjct: 200 TGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRS 259
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
+ VLS A A L G Q+H +++ + N+L+++Y KCGN+ DA F +
Sbjct: 260 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 319
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+ER++VS+N+MI+G+A++G G+EAL +F M+ P+ IT + VL+AC+H GLVE+G
Sbjct: 320 EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGI 379
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
YF SM + + PEHY CM+D+LGRAG LAEA DL+ M FEP +WGALLGA R
Sbjct: 380 SYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRI 439
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H N +L + AA+ + ELEP++A YV+LS++Y+ GK RD ++R+ + + ++K PG S
Sbjct: 440 HRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFS 499
Query: 573 WIILKDKVHLFLAG 586
WI +++KVH F AG
Sbjct: 500 WIEVQNKVHTFSAG 513
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 199/430 (46%), Gaps = 47/430 (10%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+NA+++ + + EA E+F MP R+ VS+ M++G+ RRG EA L+ P
Sbjct: 70 SWNALMSGYVQWG-KMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPV- 127
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMV------------------ 109
RD A++SGY + G EEA R+F+AM E++ V+W +MV
Sbjct: 128 -RDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNM 186
Query: 110 -------------DGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF 156
GY + G + EA+ +FD MP+K+ V+W AM+ Y + C E+ LF
Sbjct: 187 MPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLF 246
Query: 157 LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
+ M R G N + C G+Q+HG + R G+ +GN+++ MY +
Sbjct: 247 IEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKC 306
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMI 272
G M++A F M +RD VSWN++I+GY +G +EA +F+ M D ++ ++
Sbjct: 307 GNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVL 366
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
S G +EK I F M VT +T +I + EA +M
Sbjct: 367 AACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDM---PF 423
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ ++L AS G + ++ E + + L ++Y+ G DA +
Sbjct: 424 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPE-NAGMYVLLSNIYASSGKWRDARK 482
Query: 388 IFTNIDERNI 397
+ ++ER +
Sbjct: 483 MRVMMEERGV 492
>gi|147841850|emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
Length = 761
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/571 (40%), Positives = 341/571 (59%), Gaps = 48/571 (8%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N I+ LI N I EA +F MP RN V++ +MITG+VRR +A +L+ MP R
Sbjct: 71 NKRISHLIRNG-RINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMPDR-- 127
Query: 70 DSVCSNALISGYLKV-GR-CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
D V N +ISGY+ GR EE +F+ M E+D V+W +M+ GY + GR+ EA ++FD
Sbjct: 128 DVVSWNLMISGYVSCRGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDS 187
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR----------GGMAFNS-------IT 170
M E+NVV+W AMV G+++ E + F+ M G+ N I
Sbjct: 188 MQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRIL 247
Query: 171 LT----------------ILFEACGRFFRYREGVQVHGLVSRFG--------FDYDIILG 206
LT IL G+ R + Q+ + + F+ +++
Sbjct: 248 LTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSW 307
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
NS+I Y + + A +F M +RD +SWN++ISGYV ++EEA+ LF+ MP D +
Sbjct: 308 NSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTL 367
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+W +MI+GF+ KGNLE + LF +P+K+ V+W ++I+G+ NN Y+ A + +ML +
Sbjct: 368 TWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQG 427
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+P++ TLSSVLS + A L+ G QIH + K + D+ I NSL+++YS+CG +V+A
Sbjct: 428 EKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVI-PDIPINNSLITMYSRCGAIVEAR 486
Query: 387 RIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
IF + ++ ++S+N+MI G+A +G +AL LF MK + P ITF+SVL+AC H
Sbjct: 487 TIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHA 546
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
G V+EG ++FKSM + IEP EH+A +VDI+GR G L EA+DLINSM FEP VWGA
Sbjct: 547 GXVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGA 606
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
LLGA R H N++LA++AA+ LM+LEP+S+ P
Sbjct: 607 LLGACRVHNNVELARVAAEALMKLEPESSAP 637
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 230/490 (46%), Gaps = 90/490 (18%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N IS ++ GR EA +F+AM ++++V W SM+ GY ++ + +AR++FD+MP
Sbjct: 66 DLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMP 125
Query: 130 EKNVVAWTAMVDGYMKVDC----FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+++VV+W M+ GY V C E+G LF M
Sbjct: 126 DRDVVSWNLMISGY--VSCRGRWVEEGRHLFDEMP------------------------- 158
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+ D + N++I+ Y R G MDEA ++F M +R+ VSWN++++G++
Sbjct: 159 --------------ERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFL 204
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD------VTW 299
NG++E A F RMP +D S + ++ G G L+++ + +DD +
Sbjct: 205 QNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTTRRQDDDKGDLVHAY 264
Query: 300 TAIISGFVNNEQYEEAFRWFIEML-------------RKDVRPNQLTLSSVLSASAATA- 345
+++G+ N + ++A + F ++ R V N + + V + +A
Sbjct: 265 NILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSAR 324
Query: 346 ----------TLNQGSQIHAHVVKMNMES-----------DVSIQNSLVSLYSKCGNVVD 384
T++ + I +V +ME D NS++S +++ GN+
Sbjct: 325 VLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLEL 384
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A +F I ++N+VS+NSMI+G+ NG + A L+R+M +G P++ T SVLS C+
Sbjct: 385 ARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSG 444
Query: 445 VGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
+ G I+ + KT+ P ++ + R G++ EA + + + + W
Sbjct: 445 FAALHLGMQIHQQITKTVI---PDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISW 501
Query: 504 GALLGAGRTH 513
A++G H
Sbjct: 502 NAMIGGYAFH 511
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/525 (22%), Positives = 222/525 (42%), Gaps = 128/525 (24%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+NAM+T + N + A E F MP R++ S +A++ G ++ G EA+ +
Sbjct: 188 MQERNVVSWNAMVTGFLQNG-DVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRI 246
Query: 61 YVNMPARWRDS----VCSNALISGYLKVGRCEEAARIFEAM------------VEKDVVA 104
+ + D N L++GY + GR ++A ++F+ + E++VV+
Sbjct: 247 LLTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVS 306
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM 164
W SM+ Y K + AR +FD+M E++ ++W M+ GY+++ E+ + LF M
Sbjct: 307 WNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMP---- 362
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
+ D + NS+I+ + + G ++ A
Sbjct: 363 -----------------------------------NPDTLTWNSMISGFAQKGNLELARA 387
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSW---------- 268
+F+ + +++ VSWNS+I+GY +NG+ + A L+ +M P + +S
Sbjct: 388 LFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAA 447
Query: 269 ----------------------TTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISG 305
++IT +S G + ++ +F+ + +K+ ++W A+I G
Sbjct: 448 LHLGMQIHQQITKTVIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGG 507
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+ + +A F M R VRP +T SVL+A A + +G H M E
Sbjct: 508 YAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGXVKEG---RMHFKSMACEFG 564
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ E I + S++ ++G EEA++L M
Sbjct: 565 I---------------------------EPRIEHFASLVDIVGRHGQLEEAMDLINSMPF 597
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
E P++ + ++L AC VE + +++ L P H
Sbjct: 598 E---PDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPCH 639
>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
Length = 841
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/555 (38%), Positives = 336/555 (60%), Gaps = 15/555 (2%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
++ +A YN MI+ N +A + MP + VS+ +++ G +R + + +
Sbjct: 133 EKCAACYNTMISGYAKNG-RFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFD 191
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
MP + D V N ++ GY++ G + A+ F + +V++W ++V+GYC+ GR+ EAR
Sbjct: 192 EMPDK--DLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEAR 249
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
E+FD+MPE+NVVAW ++ GY++ E ++LF+ M NSI+ T + F
Sbjct: 250 ELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEK----NSISWTTMVSG---FV 302
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL--GFMDEANKVFSMMSKRDAVSWNSL 240
R + + ++S+ D +G M+G L +D+A ++F + RDAV WN++
Sbjct: 303 RSGKLQEAKDVLSKMPSDN---VGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTM 359
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
ISGYV G ++EA LF++MP KD +SW TMI G + G + K+ +F M ++ V+W
Sbjct: 360 ISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWN 419
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+IISGFV N + EA + F+ M R + T + LSASA ATL G Q H+ +V+
Sbjct: 420 SIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRT 479
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
SD S N+L+S Y+KCG +++A ++F + ++IVS+N++I G+A NG G E + +F
Sbjct: 480 GFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVF 539
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
R+M+ + P++IT + VLSAC+H GL++EG +F SM LY+++P EHY CMVD+LGR
Sbjct: 540 REMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGR 599
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA +L+ M +P GVWGALLGA R H N ++A LAA+ L ELEP A+ YV+L
Sbjct: 600 AGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLL 659
Query: 541 SDLYSVIGKKRDGNR 555
S++ GK D ++
Sbjct: 660 SNICVEAGKWDDADK 674
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 231/455 (50%), Gaps = 32/455 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N +T+L + + A +F MP RN VSY AM++ G EA L+ MP R
Sbjct: 15 NQELTSLARSG-QLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR--R 71
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
+ V N ++ + GR E+A +F+AM ++ +W MV Y + G + ARE+ D+MP
Sbjct: 72 NPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMP 131
Query: 130 -EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM-AFNSITLTILFEACGRFFRYRE- 186
EK + M+ GY K FED L M + ++NS+ G R E
Sbjct: 132 GEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVL--------GGLIRNEEI 183
Query: 187 --GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
VQ + D D++ N ++ Y R G +D A+ FS + + +SW +L++GY
Sbjct: 184 SRSVQFFDEMP----DKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGY 239
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
G + EA LF+RMP ++ V+W +++G+ +E + LF MPEK+ ++WT ++S
Sbjct: 240 CQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVS 299
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
GFV + + +EA ++L K N ++++ + ++ Q+ +V
Sbjct: 300 GFVRSGKLQEA----KDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVV----R 351
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D N+++S Y +CG + +A +F + ++++S+N+MI+G AQ G +A ++FRKMK
Sbjct: 352 DAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMK 411
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
N +++ S++S GL E +F M+
Sbjct: 412 RR----NTVSWNSIISGFVQNGLFVEALQHFMLMR 442
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 150/329 (45%), Gaps = 59/329 (17%)
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ N +T R G + A ++F M +R+ VS+N+++S H+G + EA RLF+ MP
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT---------------------- 300
++ VSW TM+ S G +E + LF+ MP +++ +WT
Sbjct: 71 RNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRM 130
Query: 301 ----------AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+ISG+ N ++E+A I +L++ P+ ++ +SVL +++
Sbjct: 131 PGEKCAACYNTMISGYAKNGRFEDA----IALLQEMPAPDIVSWNSVLGGLIRNEEISRS 186
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q + + D+ N ++ Y + G++ A F+ I N++S+ ++++G+ Q
Sbjct: 187 VQFFDEMP----DKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQA 242
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI-----E 465
G EA LF +M + +V + G++ F ++ YN+ E
Sbjct: 243 GRMGEARELFDRMPERNVVAWNVLL--------------SGYVQFSQVEAAYNLFIEMPE 288
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ MV R+G L EA D+++ M
Sbjct: 289 KNSISWTTMVSGFVRSGKLQEAKDVLSKM 317
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N ++ ++ G + A R+F + RN+VSYN+M+S A +G EA LF +M
Sbjct: 15 NQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRR--- 71
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA--CMVDILGRAGSLAEA 487
N +++ +++ AC+ G VE+ + L++ P Y+ MV RAG L A
Sbjct: 72 -NPVSWNTMMVACSQHGRVEDA-------RGLFDAMPARNEYSWTIMVSCYVRAGELTLA 123
Query: 488 IDLINSMTFEPPPGVWGALL 507
+L++ M E + ++
Sbjct: 124 RELLDRMPGEKCAACYNTMI 143
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/595 (35%), Positives = 348/595 (58%), Gaps = 44/595 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP R+ + MITG+++ GM EA +L+ A+ ++ V A+++GY+K
Sbjct: 20 ARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAK-KNVVTWTAMVNGYIKFN 78
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
+ +EA R+F M ++VV+W +MVDGY + G +A ++F +MPE+NVV+W ++ ++
Sbjct: 79 QVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQ 138
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
ED LF M+ D D++
Sbjct: 139 CGRIEDAQRLFDQMK---------------------------------------DRDVVS 159
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
+++ + G +++A +F M R+ VSWN++I+GY N ++EA +LF+RMP +D
Sbjct: 160 WTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDM 219
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML-R 324
SW TMITGF G L ++ +LF M EK+ +TWTA+++G+V + EEA R FI+ML
Sbjct: 220 PSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLAT 279
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+++PN T +VL A + A L +G QIH + K + + ++L+++YSKCG +
Sbjct: 280 NELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHT 339
Query: 385 AYRIFTN--IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A ++F + + +R+++S+N MI+ +A +G G+EA+NLF +M++ G+ N +TF+ +L+AC
Sbjct: 340 ARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTAC 399
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVEEGF YF + +I+ +HYAC+VD+ GRAG L EA ++I + E P V
Sbjct: 400 SHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTV 459
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WGALL H N D+ KL A+ ++++EP +A Y +LS++Y+ +GK ++ VRM+ K
Sbjct: 460 WGALLAGCNVHGNADIGKLVAEKILKIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKD 519
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI-SKGTKEFDWPKHD 616
++K PGCSWI + + V +F+ G K + + L + +K K D P D
Sbjct: 520 MGLKKQPGCSWIEVGNTVQVFVVGDKPHSQYEPLGHLLHDLHTKMKKAGDMPDDD 574
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 222/441 (50%), Gaps = 52/441 (11%)
Query: 1 MADRTSASYNAMITALINNNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
M +R S+N +ITAL+ C I +A +F M R+ VS+ M+ G + G +A
Sbjct: 121 MPERNVVSWNTIITALV--QCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARA 178
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
L+ MP R+ V NA+I+GY + R +EA ++F+ M E+D+ +W +M+ G+ + G +
Sbjct: 179 LFDQMPV--RNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELN 236
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEAC 178
A ++F +M EKNV+ WTAM+ GY++ E+ +F+ M + N+ T + AC
Sbjct: 237 RAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGAC 296
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF--SMMSKRDAVS 236
EG Q+H ++S+ F + +++I MY + G + A K+F ++S+RD +S
Sbjct: 297 SDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLIS 356
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE--- 293
WN +I+ Y H+G +EA I LFN M E
Sbjct: 357 WNGMIAAYAHHGYGKEA-------------------------------INLFNEMQELGV 385
Query: 294 -KDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGS 351
+DVT+ +++ + EE F++F E+L+ + ++ + + ++ L + S
Sbjct: 386 CANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEAS 445
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNV----VDAYRIFTNIDERNIVSYNSMISGF 407
I + + E +++ +L++ + GN + A +I I+ +N +Y+ + + +
Sbjct: 446 NI---IEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKIL-KIEPQNAGTYSLLSNMY 501
Query: 408 AQNGLGEEALNLFRKMKDEGL 428
A G +EA N+ +MKD GL
Sbjct: 502 ASVGKWKEAANVRMRMKDMGL 522
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 215/459 (46%), Gaps = 96/459 (20%)
Query: 2 ADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
A + ++ AM+ I N + EA +F MP+RN VS+ M+ G+ R G+ +A +L+
Sbjct: 60 AKKNVVTWTAMVNGYIKFN-QVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLF 118
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
MP R+ V N +I+ ++ GR E+A R+F+ M ++DVV+W +MV G K GRV +A
Sbjct: 119 RRMPE--RNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDA 176
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
R +FD+MP +NVV+W AM+ GY + ++ LF M
Sbjct: 177 RALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMP--------------------- 215
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+ D+ N++IT + + G ++ A K+F M +++ ++W +++
Sbjct: 216 ------------------ERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMM 257
Query: 242 SGYVHNGEIEEAYRLFERMPGKD--------FVS-------------------------- 267
+GYV +G EEA R+F +M + FV+
Sbjct: 258 TGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVF 317
Query: 268 ------WTTMITGFSSKGNLEKSIELFN--MMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
+ +I +S G L + ++F+ ++ ++D ++W +I+ + ++ +EA F
Sbjct: 318 QDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLF 377
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ------NSLV 373
EM V N +T +L+A + T + +G + ++K + SIQ LV
Sbjct: 378 NEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILK-----NRSIQLREDHYACLV 432
Query: 374 SLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNG 411
L + G + +A I + +E + + ++++G +G
Sbjct: 433 DLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHG 471
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/637 (35%), Positives = 356/637 (55%), Gaps = 69/637 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + SY +MIT + N + +A +F +P RN V+ +AMI+G+VR G +A ++
Sbjct: 77 MPRRDAVSYASMITVYLKNK-DLPQAEILFREIPERNVVADSAMISGYVRAGRLDKARQV 135
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ M R + +L+SGY K+G +EA R+F M EK+VV+W + V GY + G + E
Sbjct: 136 FDQMVER--NVFSWTSLVSGYFKIGNVDEAMRLFNQMPEKNVVSWTTAVVGYAQNGFIDE 193
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR+IF++MPEKN++AWTAMV Y++ D ++ F+LF M + N + I+ C
Sbjct: 194 ARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQMPQR----NLYSWNIMISGCIN 249
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
R E +Q+ F+ M +R+ VSW +L
Sbjct: 250 ANRLNEAIQL-----------------------------------FNSMPQRNEVSWTTL 274
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
++G NG +E A + F+ MP KD +W MIT + +G++ ++ LFN+MPEK+ V+W
Sbjct: 275 VTGLARNGMMELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWN 334
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+I G+ N + R+ I MLR + +PN+ T++SVL+A + L Q H V+ +
Sbjct: 335 ALIDGYARNGPESNSLRYLILMLRSNFKPNETTITSVLTACDSILELMQA---HGLVIHL 391
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
E D + N LV+ YS+CG+V+ A IF ++ ++IVS+ +MI ++ +G G AL +F
Sbjct: 392 GFEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVF 451
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M G P+ ITF+ +LSAC+H GLV++G + F SM Y +EP EHY+C+VDILGR
Sbjct: 452 ARMLRSGAKPDGITFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGR 511
Query: 481 AGSLAEAIDLINSMTFEPPP-----GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
AG + +A+ +++ M PP V GALLGA R H ++ LA + L+E EP S+
Sbjct: 512 AGEMNKAMKVVSEM----PPHECDGAVLGALLGACRLHKDVGLANHIGEKLIEKEPTSSG 567
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
YV+L++ Y+ GK + VR + K + ++K PG S I +K K H+F +S L+E
Sbjct: 568 SYVLLANAYAACGKWNEFAEVRKEMKERNVKKEPGFSQIEVKGKSHVFFVRDRSHPQLEE 627
Query: 596 IEVTLQTISKGTKEFDWPKHDWSLLGLERDWSYTADN 632
I + L D LL L R+ YT ++
Sbjct: 628 IYLFL---------------DEKLLPLMREMGYTPES 649
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 194/384 (50%), Gaps = 47/384 (12%)
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
+ P D+ SN IS G+ +EA ++F+ M +D V++ SM+ Y K + +A
Sbjct: 42 IPFPVFASDTYESNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQA 101
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
+F ++PE+NVVA +AM+ GY++ + +F M + N + T L +
Sbjct: 102 EILFREIPERNVVADSAMISGYVRAGRLDKARQVFDQM----VERNVFSWTSLVSGYFKI 157
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
E +++ + + +++ + + Y + GF+DEA +F+ M +++ ++W +++
Sbjct: 158 GNVDEAMRLFNQMP----EKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMV 213
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
YV N EI+EA+ LF +MP ++ SW MI+G + L ++I+LFN MP++++V+WT
Sbjct: 214 KSYVENDEIDEAFELFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTT 273
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+++G N E A ++F M K
Sbjct: 274 LVTGLARNGMMELARKYFDHMPTK------------------------------------ 297
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
D++ N++++ Y G++ +A +F + E+NIVS+N++I G+A+NG +L
Sbjct: 298 ---DIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLI 354
Query: 422 KMKDEGLVPNQITFLSVLSACNHV 445
M PN+ T SVL+AC+ +
Sbjct: 355 LMLRSNFKPNETTITSVLTACDSI 378
>gi|224103137|ref|XP_002312939.1| predicted protein [Populus trichocarpa]
gi|222849347|gb|EEE86894.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/589 (38%), Positives = 351/589 (59%), Gaps = 19/589 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVR-RGMFY--EA 57
M + + S+NA+I A + I +A ++F MP R+ VS+ MI+G+V G+ + E
Sbjct: 23 MEETNTVSWNAIIRAYVKRR-EIAKARKLFDEMPQRDIVSWNLMISGYVSCHGIRFLKEG 81
Query: 58 EELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
L+ MP R D V N +ISGY K GR +EA R+F+ M E DVV+W ++V G+ + G
Sbjct: 82 RNLFDRMPER--DIVSWNTMISGYAKNGRMDEALRMFKLMPEGDVVSWNAIVTGFLQNGD 139
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR-GGMAFNSI-TLTILF 175
V A E F++MPE++ + +A+V G ++ ++ + + R GG N + L
Sbjct: 140 VARAIEYFERMPERDAASLSALVSGLIRNGELDEAARVVVRFERDGGRKENLLQAYNTLI 199
Query: 176 EACGRFFRYREGVQVHGLVS---------RFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
GR R E ++ + F +++ N++I Y + G + A ++F
Sbjct: 200 AGYGRRDRVDEARKLFDQIPFCDGKGKGGDGRFGRNVVSWNTMIMCYVKAGNIVFARELF 259
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
M +RD +SWN++ISGYV+ +++EA RLF MP D SW MI G + G+L++ +
Sbjct: 260 DQMMERDTISWNTMISGYVNMLDMDEASRLFCEMPNPDIFSWNKMIAGHAQIGDLDRVND 319
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
LF MP+K+ V+W ++I+G+ N+ Y A + FI+M + +P++ TLSSVLS SA
Sbjct: 320 LFGRMPQKNLVSWNSVITGYEKNDDYIGAIKIFIQMQVEGEKPDRHTLSSVLSVSAGIVD 379
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMIS 405
L G QIH V K + DV I N+L+++YS+CG +++A IF + ++ ++S+N+MI
Sbjct: 380 LQLGMQIHQLVTKTVI-PDVPINNALITMYSRCGAIIEAGTIFDEVKLQKEVISWNAMIG 438
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G+A +G EAL +F+ MK + P ITF+SVL AC H GLVEEG F+SM + IE
Sbjct: 439 GYASHGYAVEALEVFKLMKSFDVRPTHITFISVLHACAHAGLVEEGREIFESMADEFGIE 498
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
P EHYA +VDI+ R G L +A+DLINSM FEP VWGALL A + H +++A++AA+
Sbjct: 499 PSVEHYASLVDIMSRHGQLEQALDLINSMPFEPDKAVWGALLSAAKVHNKIEVARVAAEA 558
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
L+ LEPDS+ PYV+L ++Y+ +G+ VR+ + I+K SW+
Sbjct: 559 LIRLEPDSSAPYVLLYNMYADVGQWDSAAEVRIMMERSNIKKQAAYSWV 607
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 239/463 (51%), Gaps = 44/463 (9%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N IS K GR +EA +F+ M E + V+W +++ Y K+ + +AR++FD+MP++++V
Sbjct: 1 NKKISNLAKNGRIDEARALFDQMEETNTVSWNAIIRAYVKRREIAKARKLFDEMPQRDIV 60
Query: 135 AWTAMVDGYMK---VDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQV 190
+W M+ GY+ + ++G +LF M R +++N+ + + R E +++
Sbjct: 61 SWNLMISGYVSCHGIRFLKEGRNLFDRMPERDIVSWNT-----MISGYAKNGRMDEALRM 115
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
L+ + D++ N+I+T + + G + A + F M +RDA S ++L+SG + NGE+
Sbjct: 116 FKLMP----EGDVVSWNAIVTGFLQNGDVARAIEYFERMPERDAASLSALVSGLIRNGEL 171
Query: 251 EEAYRL---FERMPGKD---FVSWTTMITGFSSKGNLEKSIELFNMMP------------ 292
+EA R+ FER G+ ++ T+I G+ + ++++ +LF+ +P
Sbjct: 172 DEAARVVVRFERDGGRKENLLQAYNTLIAGYGRRDRVDEARKLFDQIPFCDGKGKGGDGR 231
Query: 293 -EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
++ V+W +I +V A F +M+ +D ++ ++++S +++ S
Sbjct: 232 FGRNVVSWNTMIMCYVKAGNIVFARELFDQMMERDT----ISWNTMISGYVNMLDMDEAS 287
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
++ + D+ N +++ +++ G++ +F + ++N+VS+NS+I+G+ +N
Sbjct: 288 RLFCEMPN----PDIFSWNKMIAGHAQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKND 343
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEH 470
A+ +F +M+ EG P++ T SVLS + ++ G I+ KT+ P
Sbjct: 344 DYIGAIKIFIQMQVEGEKPDRHTLSSVLSVSAGIVDLQLGMQIHQLVTKTVI---PDVPI 400
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
++ + R G++ EA + + + + W A++G +H
Sbjct: 401 NNALITMYSRCGAIIEAGTIFDEVKLQKEVISWNAMIGGYASH 443
>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/604 (38%), Positives = 351/604 (58%), Gaps = 43/604 (7%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S N I+ LI I EA E+F + N +++ MIT +V+R +A +L+ MP R
Sbjct: 59 SLNKKISYLIRTG-RINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNR 117
Query: 68 WRDSVCSNALISGYLKVGR--CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
D V N ++SGY+ G E A +F+ M E D V+W +M+ GY K G + +A E+F
Sbjct: 118 --DIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELF 175
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTI-----LFEACG 179
++MPE+NVV+W AMV GY+ E + F M +R + ++ + L EA
Sbjct: 176 NEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAER 235
Query: 180 RFFRYREGVQVHGLVSRF----------GFDYD--------------------IILGNSI 209
+Y V LV + G Y+ +I NS+
Sbjct: 236 ILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSM 295
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
I Y R G + A ++F M +RD SWN++ISGYV +++EA LF RMP D +SW
Sbjct: 296 IMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWN 355
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
MI+GFS G+L+ + +LF +PEK V+W ++ISG+ NE Y+ A F++M + +P
Sbjct: 356 MMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKP 415
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
++ TLSS+LSA A L G+QIH V K + +D+ I NSLV++YS+CG +V+A +F
Sbjct: 416 DRHTLSSILSACAGLVDLVLGTQIHQLVTKAFI-ADLPINNSLVTMYSRCGAIVEARMVF 474
Query: 390 TNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
++ +R+++S+N+MI G+A +G EAL LF MK + P+ ITF+SVL+AC H GL+
Sbjct: 475 DEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLI 534
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
EEG F SM + I+P EHYA +VDI+GR G L EA+ LINSM EP VWGALLG
Sbjct: 535 EEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLG 594
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A + H N+++A+ AA+ LM+L+P+S+ PYV+L ++Y+ +G+ D +R + ++K
Sbjct: 595 ACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKD 654
Query: 569 PGCS 572
G S
Sbjct: 655 AGYS 658
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 10/162 (6%)
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+F S I+ G + ++ ELF+ + +TW +I+ +V + +A + F EM
Sbjct: 56 EFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMP 115
Query: 324 RKDVRPNQLTLSSVLSASA--ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
+D+ L LS +S N Q+ E+D N+++S Y+K G
Sbjct: 116 NRDIVSWNLMLSGYISCGGKFVERARNMFDQMP--------ETDCVSWNTMLSGYAKSGT 167
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ A +F + ERN+VS+N+M+SG+ NG E+A+ F+ M
Sbjct: 168 MDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLM 209
>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/604 (38%), Positives = 351/604 (58%), Gaps = 43/604 (7%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S N I+ LI I EA E+F + N +++ MIT +V+R +A +L+ MP R
Sbjct: 59 SLNKKISYLIRTG-RINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNR 117
Query: 68 WRDSVCSNALISGYLKVGR--CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
D V N ++SGY+ G E A +F+ M E D V+W +M+ GY K G + +A E+F
Sbjct: 118 --DIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELF 175
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTI-----LFEACG 179
++MPE+NVV+W AMV GY+ E + F M +R + ++ + L EA
Sbjct: 176 NEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEAER 235
Query: 180 RFFRYREGVQVHGLVSRF----------GFDYD--------------------IILGNSI 209
+Y V LV + G Y+ +I NS+
Sbjct: 236 ILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSM 295
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
I Y R G + A ++F M +RD SWN++ISGYV +++EA LF RMP D +SW
Sbjct: 296 IMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWN 355
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
MI+GFS G+L+ + +LF +PEK V+W ++ISG+ NE Y+ A F++M + +P
Sbjct: 356 MMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKP 415
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
++ TLSS+LSA A L G+QIH V K + +D+ I NSLV++YS+CG +V+A +F
Sbjct: 416 DRHTLSSILSACAGLVDLVLGTQIHQLVTKAFI-ADLPINNSLVTMYSRCGAIVEARMVF 474
Query: 390 TNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
++ +R+++S+N+MI G+A +G EAL LF MK + P+ ITF+SVL+AC H GL+
Sbjct: 475 DEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLI 534
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
EEG F SM + I+P EHYA +VDI+GR G L EA+ LINSM EP VWGALLG
Sbjct: 535 EEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLG 594
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A + H N+++A+ AA+ LM+L+P+S+ PYV+L ++Y+ +G+ D +R + ++K
Sbjct: 595 ACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKD 654
Query: 569 PGCS 572
G S
Sbjct: 655 AGYS 658
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 10/162 (6%)
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+F S I+ G + ++ ELF+ + +TW +I+ +V + +A + F EM
Sbjct: 56 EFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMP 115
Query: 324 RKDVRPNQLTLSSVLSASA--ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
+D+ L LS +S N Q+ E+D N+++S Y+K G
Sbjct: 116 NRDIVSWNLMLSGYISCGGKFVERARNMFDQMP--------ETDCVSWNTMLSGYAKSGM 167
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ A +F + ERN+VS+N+M+SG+ NG E+A+ F+ M
Sbjct: 168 MDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLM 209
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/602 (35%), Positives = 351/602 (58%), Gaps = 50/602 (8%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
S SYN ++ AL + S+ + +F MP++++VSY MI+ G+ A + P
Sbjct: 169 SFSYNTLLHAL-GVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAP 227
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
+ D+V N +++ Y++ GR +EA +F++ E D ++W +++ GY ++ ++ EA+++F
Sbjct: 228 EK--DAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMF 285
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+KMP+++VV+W MV GY RRG MA
Sbjct: 286 NKMPQRDVVSWNTMVSGYA---------------RRGDMA-------------------- 310
Query: 186 EGVQVHGLVSRFGFDY----DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+R FD D+ +I++ Y + G ++EA +VF M ++AVSWN+++
Sbjct: 311 --------EARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMM 362
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
+ YV +EEA LF+ MP ++ SW TM+TG++ G L+++ +F MMP+KD V+W A
Sbjct: 363 AAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAA 422
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+++ + EE + F EM R N+ + VLS A A L G Q+H+ ++K
Sbjct: 423 MLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAG 482
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ N+L+++Y KCG++ +A+ F ++ER++VS+N+MI+G+A++G G+EAL +F
Sbjct: 483 YGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFD 542
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
M+ P+ IT + VL+AC+H GLVE+G YF SM + + PEHY CM+D+LGRA
Sbjct: 543 TMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRA 602
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L EA++L+ M FEP +WGALLGA R H N +L + AA+ + ELEP++A YV+LS
Sbjct: 603 GRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLS 662
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
++Y+ GK RD +++R + ++K PG SWI +++KVH F G + ++I L+
Sbjct: 663 NIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLE 722
Query: 602 TI 603
+
Sbjct: 723 DL 724
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 209/397 (52%), Gaps = 29/397 (7%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N I+ +++ GR +A R+F AM + + +M+ GY GR+ +A F +P +
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSF 170
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
++ ++ D LF M +S++ ++ + HGLV
Sbjct: 171 SYNTLLHALGVSSSLADVRALFDEM----PVKDSVSYNVMISSHAN----------HGLV 216
Query: 195 S--RFGFDY----DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
S R FD D + N ++ Y R G + EA ++F ++ DA+SWN+L++GYV
Sbjct: 217 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRS 276
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
+IEEA ++F +MP +D VSW TM++G++ +G++ ++ LF++ P +D TWTAI+SG+
Sbjct: 277 QIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQ 336
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
N EEA R F M K N ++ +++++A + + ++ + N V+
Sbjct: 337 NGMLEEAKRVFDAMPDK----NAVSWNAMMAAYVQRRMMEEAKELFDAMPCRN----VAS 388
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
N++++ Y++ G + +A IF + +++ VS+ +M++ ++Q G EE L LF++M G
Sbjct: 389 WNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGE 448
Query: 429 VPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNI 464
N+ F VLS C + +E G ++ + +K Y +
Sbjct: 449 WVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGV 485
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 163/343 (47%), Gaps = 53/343 (15%)
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR---- 255
D ++I N IT + R G + +A ++F+ M +R ++N++++GY NG + +A
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163
Query: 256 ---------------------------LFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
LF+ MP KD VS+ MI+ ++ G + + F
Sbjct: 164 IPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYF 223
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
++ PEKD V+W +++ +V N + +EA F + T +S +A A
Sbjct: 224 DLAPEKDAVSWNGMLAAYVRNGRIQEARELF----------DSRTEWDAISWNALMAGYV 273
Query: 349 QGSQIHAHVVKMNM--ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
Q SQI N + DV N++VS Y++ G++ +A R+F R++ ++ +++SG
Sbjct: 274 QRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSG 333
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+AQNG+ EEA +F M D+ N +++ ++++A ++EE F +M N+
Sbjct: 334 YAQNGMLEEAKRVFDAMPDK----NAVSWNAMMAAYVQRRMMEEAKELFDAM-PCRNVAS 388
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+ M+ +AG L EA + M + W A+L A
Sbjct: 389 ----WNTMLTGYAQAGMLDEARAIFGMMP-QKDAVSWAAMLAA 426
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/565 (37%), Positives = 339/565 (60%), Gaps = 10/565 (1%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
I EA + F ++ + S+ ++++G+ G+ EA +++ MP R + V N L+SGY
Sbjct: 32 QINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPER--NIVSWNGLVSGY 89
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+K EEA +FE M E++VV+W +MV GY ++G V+EA +F +MPE+N V+WT M
Sbjct: 90 IKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFG 149
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G + +D L+ M + + T + R R E ++ + +
Sbjct: 150 GLIDGGRIDDARKLYDMMP----GKDVVASTNMIGGLCREGRVDEAREIFDEMR----ER 201
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++I ++IT YG+ +D A K+F +M ++ VSW S++ GY +G IE+A FE MP
Sbjct: 202 NVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP 261
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
K ++ MI G + K+ +F+ M ++D+ TW +I + EA F +
Sbjct: 262 MKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQ 321
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M R+ VRP+ +L S+LS A A+L G Q+HAH+V+ + DV + + L+++Y KCG
Sbjct: 322 MQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGE 381
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+V A +F ++I+ +NS+ISG+A +GLGEEAL +F +M G +PN++T +++L+A
Sbjct: 382 LVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTA 441
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C++ G +EEG F+SM++ + + P EHY+C VD+LGRAG + +A++LINSMT +P
Sbjct: 442 CSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDAT 501
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VWGALLGA +TH LDLA++AA+ L E+EP++A PY++LS + + K D +R +
Sbjct: 502 VWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMR 561
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAG 586
K + K PGCSWI + KVH+F G
Sbjct: 562 TKNVSKFPGCSWIEVGKKVHMFTRG 586
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 190/393 (48%), Gaps = 52/393 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N +++ I N I EA +F MP RN VS+ AM+ G+V+ GM EAE L
Sbjct: 74 MPERNIVSWNGLVSGYIKNRM-IEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELL 132
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ V + G + GR ++A ++++ M KDVVA +M+ G C++GRV E
Sbjct: 133 FWRMPE--RNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDE 190
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACG 179
AREIFD+M E+NV+ WT M+ GY + + LF M + +++ S+ L + G
Sbjct: 191 AREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLG--YTLSG 248
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
R E +V + +I N++I G +G + +A +VF M RD +W
Sbjct: 249 RIEDAEEFFEVMPM-------KPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRG 301
Query: 240 LISGYVHNGEIEEAYRLFERMPGK------------------------------------ 263
+I Y G EA LF +M +
Sbjct: 302 MIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 264 ---DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
D + ++T + G L K+ +F+ P KD + W +IISG+ ++ EEA + F
Sbjct: 362 FDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFH 421
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
EM PN++TL ++L+A + L +G +I
Sbjct: 422 EMPLSGTMPNKVTLIAILTACSYGGKLEEGLEI 454
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 157/318 (49%), Gaps = 23/318 (7%)
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
I+ R+G ++EA K F + + SWNS++SGY NG EA ++F+ MP ++ VSW
Sbjct: 24 ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWN 83
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+++G+ +E++ +F +MPE++ V+WTA++ G+V EA F M +
Sbjct: 84 GLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPER---- 139
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N+++ + + ++ +++ M DV +++ + G V +A IF
Sbjct: 140 NEVSWTVMFGGLIDGGRIDDARKLY----DMMPGKDVVASTNMIGGLCREGRVDEAREIF 195
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ ERN++++ +MI+G+ QN + A LF M ++ ++++ S+L G +E
Sbjct: 196 DEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIE 251
Query: 450 EGFIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+ +F+ M P AC M+ LG G + +A + + M + W ++
Sbjct: 252 DAEEFFEVM-------PMKPVIACNAMIVALGEVGEIVKARRVFDQME-DRDNATWRGMI 303
Query: 508 GA-GRTHLNLDLAKLAAQ 524
A R L+ +L AQ
Sbjct: 304 KAYERKGFELEALELFAQ 321
>gi|356510733|ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 649
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/601 (37%), Positives = 339/601 (56%), Gaps = 55/601 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I EA +F +M R+ V++ +MI+G+V+R A +L+ MP RD V N ++SGY
Sbjct: 54 ISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPR--RDVVSWNLIVSGYF 111
Query: 83 KVGRC-----EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
C EE R+FE M ++D V+W +++ GY K GR+ +A ++F+ MPE N V++
Sbjct: 112 SC--CGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYN 169
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRR----------GGMAFN---SITLTILFEACG----- 179
A++ G++ E F +M G+ N + IL E CG
Sbjct: 170 AVITGFLLNGDVESAVGFFRTMPEHDSTSLCALISGLVRNGELDLAAGILRE-CGNGDDG 228
Query: 180 -------------------------RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
R F G + F +++ NS++ Y
Sbjct: 229 KDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYV 288
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
+ G + A ++F M +RD SWN+LIS YV +EEA +LF MP D +SW ++I+G
Sbjct: 289 KAGDIVFARELFDRMVERDNCSWNTLISCYVQISNMEEASKLFREMPSPDVLSWNSIISG 348
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ KG+L + + F MP K+ ++W II+G+ NE Y+ A + F EM + RP++ TL
Sbjct: 349 LAQKGDLNLAKDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTL 408
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID- 393
SSV+S S L G Q+H V K + D I NSL+++YS+CG +VDA +F I
Sbjct: 409 SSVISVSTGLVDLYLGKQLHQLVTKTVL-PDSPINNSLITMYSRCGAIVDACTVFNEIKL 467
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
++++++N+MI G+A +G EAL LF+ MK + P ITF+SVL+AC H GLVEEG+
Sbjct: 468 YKDVITWNAMIGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHAGLVEEGWR 527
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
FKSM Y IEP EH+A +VDILGR G L EA+DLIN+M F+P VWGALLGA R H
Sbjct: 528 QFKSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLGACRVH 587
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N++LA +AA L+ LEP+S+ PYV+L ++Y+ +G+ D VR+ + K ++K G SW
Sbjct: 588 NNVELALVAADALIRLEPESSAPYVLLYNMYANLGQWDDAESVRVLMEEKNVKKQAGYSW 647
Query: 574 I 574
+
Sbjct: 648 V 648
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
S ++ N +S + G + +A +F ++ R+ V++NSMISG+ Q A LF +M
Sbjct: 36 SPLNQSNKKLSNLIRSGRISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEM 95
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA-- 481
+V + S C VEEG + L+ + P + + I G A
Sbjct: 96 PRRDVVSWNLIVSGYFSCCGS-RFVEEG-------RRLFELMPQRDCVSWNTVISGYAKN 147
Query: 482 GSLAEAIDLINSM 494
G + +A+ L N+M
Sbjct: 148 GRMDQALKLFNAM 160
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/578 (35%), Positives = 320/578 (55%), Gaps = 34/578 (5%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A + F +M RN +++ MI G A +Y P + C ALI+G + G
Sbjct: 279 AIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVK--SIACRTALITGLAQCG 336
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
R ++A +FE + E VV+W +++ GY + G V EA+E+FDKMP +N ++W M+ GY +
Sbjct: 337 RIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQ 396
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
E+ L + R GM + +LT +F AC G QVH L + G ++
Sbjct: 397 NGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFA 456
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
N++ITMYG+ M+ A +V F RM KD
Sbjct: 457 CNALITMYGKCRNMEYARQV-------------------------------FSRMVTKDI 485
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
VSW + + L+++ F+ M +DDV+WT IIS + + EQ EA F M +
Sbjct: 486 VSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCE 545
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
PN L+ +L + G QIH +K+ M+S++ + N+L+S+Y KCG D+
Sbjct: 546 HELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADS 604
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
RIF ++ER+I ++N++I+G+AQ+GLG EA+ +++ M+ G++PN++TF+ +L+AC+H
Sbjct: 605 RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHA 664
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GLV+EG+ +FKSM Y + P PEHYACMVD+LGR G + A I M EP +W A
Sbjct: 665 GLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSA 724
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA + H N ++ K AA+ L +EP +A YV+LS++YS +G + VR K + +
Sbjct: 725 LLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGV 784
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K PGCSW +KDK+H F+ G K ++EI TL+ +
Sbjct: 785 IKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEEL 822
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/519 (28%), Positives = 265/519 (51%), Gaps = 43/519 (8%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R ++N+MI+A +N A +++ + N + A +++G+ R G EA +
Sbjct: 60 MPRRDIIAWNSMISAYCHNGMP-DAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRV 118
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ M R ++V NA+IS Y++ G A R+F+AM +DV +W SM+ GYC ++++
Sbjct: 119 FDGMLER--NTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVD 176
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +F+KMPE+N+V+WT M+ GY +++ +D+F M R G+ + A
Sbjct: 177 ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKG 236
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR-LGFMDEANKVFSMMSKRDAVSWNS 239
+ L + GF+ D+++G +I+ +Y R +D A K F M +R+ +W++
Sbjct: 237 LGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWST 296
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDF-------------------------------VSW 268
+I+ H G I+ A ++ER P K VSW
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSW 356
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+ITG+ G + ++ ELF+ MP ++ ++W +I+G+ N + EEA E+ R +
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P+ +L+S+ A + L G+Q+H+ VK+ + + N+L+++Y KC N+ A ++
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F+ + ++IVS+NS ++ QN L +EA N F M L + +++ +++SA H
Sbjct: 477 FSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQS 532
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
E FK+M + + P + +LG GSL +
Sbjct: 533 NEAMGAFKTMFCEHELPNSP----ILTILLGVCGSLGAS 567
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 211/437 (48%), Gaps = 61/437 (13%)
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
+ GRV EARE+FD MP ++++AW +M+ Y + DL+ ++ G M +I
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAI---- 101
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+++ YGRLG + EA +VF M +R+
Sbjct: 102 -----------------------------------LLSGYGRLGRVLEARRVFDGMLERN 126
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
V+WN++IS YV NG+I A RLF+ MP +D SW +M+TG+ + + LF MPE
Sbjct: 127 TVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE 186
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
++ V+WT +ISG+ E + +A+ F +M R+ + P+Q +S LSA L+ +
Sbjct: 187 RNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESL 246
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVD-AYRIFTNIDERNIVSYNSMISGFAQNGL 412
+K E DV I +++++YS+ +V+D A + F ++ ERN ++++MI+ + G
Sbjct: 247 RVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGR 306
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
+ A+ ++ + + + + ++ L+ C G +++ I F+ + EP +
Sbjct: 307 IDAAIAVYERDPVKS-IACRTALITGLAQC---GRIDDARILFEQIP-----EPIVVSWN 357
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG---AGRTHLNLDLAKLAAQHLMEL 529
++ + G + EA +L + M F G + G GR+ L L L EL
Sbjct: 358 ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGL-------LQEL 410
Query: 530 EPDSATPYVVLSDLYSV 546
P LS L S+
Sbjct: 411 HRSGMLPS--LSSLTSI 425
>gi|15220741|ref|NP_176416.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
gi|75097094|sp|O04590.1|PPR88_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62260, mitochondrial; Flags: Precursor
gi|2160154|gb|AAB60776.1| F19K23.18 gene product [Arabidopsis thaliana]
gi|332195821|gb|AEE33942.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
Length = 656
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/588 (37%), Positives = 343/588 (58%), Gaps = 21/588 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRG---MFYEAEEL 60
R + ++N MI+ + + +A ++F MP R+ V++ MI+G+V G EA +L
Sbjct: 69 RNTVTWNTMISGYVKRR-EMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKL 127
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP+R DS N +ISGY K R EA +FE M E++ V+W +M+ G+C+ G V
Sbjct: 128 FDEMPSR--DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDS 185
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF-----LSMRRGGMAFNSITLTILF 175
A +F KMP K+ A+V G +K + + + L R + + TL + +
Sbjct: 186 AVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGY 245
Query: 176 EACGRFFRYREGVQV--------HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
G+ R HG R F +++ NS+I Y ++G + A +F
Sbjct: 246 GQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFD 305
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
M RD +SWN++I GYVH +E+A+ LF MP +D SW M++G++S GN+E +
Sbjct: 306 QMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHY 365
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F PEK V+W +II+ + N+ Y+EA FI M + +P+ TL+S+LSAS L
Sbjct: 366 FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL 425
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISG 406
G Q+H VVK + DV + N+L+++YS+CG ++++ RIF + +R ++++N+MI G
Sbjct: 426 RLGMQMHQIVVK-TVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG 484
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+A +G EALNLF MK G+ P+ ITF+SVL+AC H GLV+E F SM ++Y IEP
Sbjct: 485 YAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEP 544
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL 526
EHY+ +V++ G EA+ +I SM FEP VWGALL A R + N+ LA +AA+ +
Sbjct: 545 QMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAM 604
Query: 527 MELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
LEP+S+TPYV+L ++Y+ +G + ++VRM + KRI+K G SW+
Sbjct: 605 SRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 216/542 (39%), Gaps = 147/542 (27%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S S+N MI+ N I EA +F MP RNAVS++AMITGF + G A L
Sbjct: 131 MPSRDSFSWNTMISGYAKNR-RIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVL 189
Query: 61 YVNMPARWRDSVCS-----------------------------------NALISGYLKVG 85
+ MP + +C+ N LI GY + G
Sbjct: 190 FRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRG 249
Query: 86 RCEEAARIFEAMVE---------------KDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
+ E A +F+ + + K+VV+W SM+ Y K G V+ AR +FD+M +
Sbjct: 250 QVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD 309
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFN---------------------- 167
++ ++W M+DGY+ V ED F LF M R ++N
Sbjct: 310 RDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKT 369
Query: 168 ----SITLTILFEACGRFFRYREGVQV-------------HGLVS-----------RFGF 199
+++ + A + Y+E V + H L S R G
Sbjct: 370 PEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGM 429
Query: 200 DY----------DIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNG 248
D+ + N++ITMY R G + E+ ++F M KR+ ++WN++I GY +G
Sbjct: 430 QMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
EA LF M KS ++ +T+ ++++ +
Sbjct: 490 NASEALNLFGSM----------------------KSNGIY-----PSHITFVSVLNACAH 522
Query: 309 NEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
+EA F+ M+ + P SS+++ ++ + I + M E D +
Sbjct: 523 AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYI---ITSMPFEPDKT 579
Query: 368 IQNSLVS---LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
+ +L+ +Y+ G A + ++ + Y + + +A GL +EA + M+
Sbjct: 580 VWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNME 639
Query: 425 DE 426
+
Sbjct: 640 SK 641
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 179/426 (42%), Gaps = 80/426 (18%)
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
R G++ EA +F + R+ V+WN++ISGYV E+ +A +LF+ MP +D V+W TMI+G
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 275 FSSKGN---LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV---- 327
+ S G LE++ +LF+ MP +D +W +ISG+ N + EA F +M ++
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWS 171
Query: 328 -------------------RPNQLTLSSVLSASAATATLNQGSQIHAHVVKM------NM 362
R + SS L A A N+ A V+
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGR 231
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE---------------RNIVSYNSMISGF 407
E V N+L+ Y + G V A +F I + +N+VS+NSMI +
Sbjct: 232 EDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAY 291
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK-------- 459
+ G A LF +MKD + I++ +++ HV +E+ F F M
Sbjct: 292 LKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWN 347
Query: 460 --------------TLYNIEPGPEHYAC----MVDILGRAGSLAEAIDLINSMTFE---P 498
+ E PE + ++ + EA+DL M E P
Sbjct: 348 MMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKP 407
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
P +LL A +NL L Q +++ + L +YS G+ + R+
Sbjct: 408 DPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFD 467
Query: 559 KKKLKR 564
+ KLKR
Sbjct: 468 EMKLKR 473
>gi|255560453|ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539509|gb|EEF41097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 662
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/586 (37%), Positives = 348/586 (59%), Gaps = 19/586 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVR-RGMFY--EAEEL 60
R + ++N+MI+ + + +A ++F MP R+ VS+ +I+G+V RG + E L
Sbjct: 76 RNTVTWNSMISGYVKRG-EMTKARKLFDEMPERDVVSWNLIISGYVSCRGKRFIEEGRNL 134
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R V N +ISGY K GR +EA +F M EK+ V+W +MV G+ + G V+
Sbjct: 135 FDKMPERC--CVSWNTMISGYAKNGRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVR 192
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI--TLTILFEAC 178
A E F +MPE++V + +A+V G ++ + + L G + + L
Sbjct: 193 AIEFFKRMPERDVTSLSALVSGLIQNSELDQAERILLDYGNNGGSKEYLVHAYNTLIAGY 252
Query: 179 GRFFRYREGVQVHGLVSRFG---------FDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
G+ R E + + + F+ +++ N++I Y + G + A K+F M
Sbjct: 253 GQRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQM 312
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
RD+ SWN++ISGYVH ++EEA LF +MP D +SW MI+G++ G+LE + + F
Sbjct: 313 PDRDSFSWNTMISGYVHVLDMEEASNLFHKMPSPDTLSWNLMISGYAQSGSLELAHDFFE 372
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
MP+K+ V+W ++I+G+ N Y A FI+M + + ++ TLSS+LS S+ L
Sbjct: 373 RMPQKNLVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDRHTLSSLLSVSSGIVDLQL 432
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISGFA 408
G QIH +V + DV + N+L+++YS+CG + +A IF + ++ ++S+N+MI G+A
Sbjct: 433 GMQIH-QLVSKTVIPDVPLNNALITMYSRCGAIFEARTIFYEMKLQKEVISWNAMIGGYA 491
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
+G EAL LF+ M+ + P ITF+SVL+AC H GLVEEG F+SM + Y +EP
Sbjct: 492 SHGYATEALELFKLMRSFKVQPTYITFISVLNACAHAGLVEEGRRIFESMVSDYGVEPRV 551
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
EH+A +VDI+GR G L EA+DLINSMT EP VWGALLGA R H N+++A++AA+ LM+
Sbjct: 552 EHFASLVDIVGRQGQLEEALDLINSMTIEPDKAVWGALLGASRVHNNVEMARVAAEALMK 611
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
LEPDS+ PY++L ++Y +G+ + +R + I+K SW+
Sbjct: 612 LEPDSSVPYILLYNMYVDVGQWDNAAEIRSMMERNNIKKEAAISWV 657
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 240/527 (45%), Gaps = 114/527 (21%)
Query: 49 VRRGMFYEAEELYVNMPARWRDSV------CSNALISGYLKVGRCEEAARIFEAMVEKDV 102
+ R +++ + MP R + SV SN IS + + GR EA +F+ + ++
Sbjct: 19 ITRQLYFTVKSRSFAMPPRAKTSVEDSNLYSSNKKISHFTRTGRINEARALFDKLERRNT 78
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC-----FEDGFDLFL 157
V W SM+ GY K+G + +AR++FD+MPE++VV+W ++ GY V C E+G +LF
Sbjct: 79 VTWNSMISGYVKRGEMTKARKLFDEMPERDVVSWNLIISGY--VSCRGKRFIEEGRNLFD 136
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
M E C + N++I+ Y + G
Sbjct: 137 KMP---------------ERC------------------------CVSWNTMISGYAKNG 157
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS---------- 267
MDEA +F+ M ++++VSWN+++SG++ NG++ A F+RMP +D S
Sbjct: 158 RMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSGLIQ 217
Query: 268 ---------------------------WTTMITGFSSKGNLEKSIELFNMMP-------- 292
+ T+I G+ +G ++++ LF+ +P
Sbjct: 218 NSELDQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKG 277
Query: 293 -----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
E++ V+W +I +V A + F +M +D + ++++S +
Sbjct: 278 RTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRD----SFSWNTMISGYVHVLDM 333
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
+ S + + D N ++S Y++ G++ A+ F + ++N+VS+NS+I+G+
Sbjct: 334 EEASNLFHKMPS----PDTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAGY 389
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEP 466
+NG A+NLF +M+ EG ++ T S+LS + + ++ G I+ KT+ P
Sbjct: 390 EKNGDYIGAINLFIQMQVEGEKSDRHTLSSLLSVSSGIVDLQLGMQIHQLVSKTVI---P 446
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
++ + R G++ EA + M + W A++G +H
Sbjct: 447 DVPLNNALITMYSRCGAIFEARTIFYEMKLQKEVISWNAMIGGYASH 493
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 197/449 (43%), Gaps = 97/449 (21%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M ++ S S+NAM++ + N + A E F MP R+ S +A+++G ++ +AE +
Sbjct: 169 MPEKNSVSWNAMVSGFLQNG-DVVRAIEFFKRMPERDVTSLSALVSGLIQNSELDQAERI 227
Query: 61 YV----NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM-------------VEKDVV 103
+ N ++ N LI+GY + GR +EA +F+ + E++VV
Sbjct: 228 LLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNVV 287
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
+W +M+ Y K G VI AR++FD+MP+++ +W M+ GY+ V E+ +LF
Sbjct: 288 SWNTMIMCYVKAGDVISARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASNLF------- 340
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
H + S D + N +I+ Y + G ++ A+
Sbjct: 341 ---------------------------HKMPSP-----DTLSWNLMISGYAQSGSLELAH 368
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-------------------- 263
F M +++ VSWNS+I+GY NG+ A LF +M +
Sbjct: 369 DFFERMPQKNLVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDRHTLSSLLSVSSGIV 428
Query: 264 ---------DFVSWT---------TMITGFSSKGNL-EKSIELFNMMPEKDDVTWTAIIS 304
VS T +IT +S G + E + M +K+ ++W A+I
Sbjct: 429 DLQLGMQIHQLVSKTVIPDVPLNNALITMYSRCGAIFEARTIFYEMKLQKEVISWNAMIG 488
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNME 363
G+ ++ EA F M V+P +T SVL+A A + +G +I +V +E
Sbjct: 489 GYASHGYATEALELFKLMRSFKVQPTYITFISVLNACAHAGLVEEGRRIFESMVSDYGVE 548
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
V SLV + + G + +A + ++
Sbjct: 549 PRVEHFASLVDIVGRQGQLEEALDLINSM 577
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/578 (35%), Positives = 320/578 (55%), Gaps = 34/578 (5%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A + F +M RN +++ MI G A +Y P + C ALI+G + G
Sbjct: 279 AIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVK--SIACRTALITGLAQCG 336
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
R ++A +FE + E VV+W +++ GY + G V EA+E+FDKMP +N ++W M+ GY +
Sbjct: 337 RIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQ 396
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
E+ L + R GM + +LT +F AC G QVH L + G ++
Sbjct: 397 NGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFA 456
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
N++ITMYG+ M+ A +V F RM KD
Sbjct: 457 CNALITMYGKCRNMEYARQV-------------------------------FSRMVTKDI 485
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
VSW + + L+++ F+ M +DDV+WT IIS + + EQ EA F M +
Sbjct: 486 VSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCE 545
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
PN L+ +L + G QIH +K+ M+S++ + N+L+S+Y KCG D+
Sbjct: 546 HELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADS 604
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
RIF ++ER+I ++N++I+G+AQ+GLG EA+ +++ M+ G++PN++TF+ +L+AC+H
Sbjct: 605 RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHA 664
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GLV+EG+ +FKSM Y + P PEHYACMVD+LGR G + A I M EP +W A
Sbjct: 665 GLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSA 724
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA + H N ++ K AA+ L +EP +A YV+LS++YS +G + VR K + +
Sbjct: 725 LLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGV 784
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K PGCSW +KDK+H F+ G K ++EI TL+ +
Sbjct: 785 IKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEEL 822
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/519 (28%), Positives = 265/519 (51%), Gaps = 43/519 (8%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R ++N+MI+A +N A +++ + N + A +++G+ R G EA +
Sbjct: 60 MPRRDIIAWNSMISAYCHNGMP-DAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRV 118
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ M R ++V NA+IS Y++ G A R+F+AM +DV +W SM+ GYC ++++
Sbjct: 119 FDGMLER--NTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVD 176
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +F+KMPE+N+V+WT M+ GY +++ +D+F M R G+ + A
Sbjct: 177 ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKG 236
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR-LGFMDEANKVFSMMSKRDAVSWNS 239
+ L + GF+ D+++G +I+ +Y R +D A K F M +R+ +W++
Sbjct: 237 LGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWST 296
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDF-------------------------------VSW 268
+I+ H G I+ A ++ER P K VSW
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSW 356
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+ITG+ G + ++ ELF+ MP ++ ++W +I+G+ N + EEA E+ R +
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P+ +L+S+ A + L G+Q+H+ VK+ + + N+L+++Y KC N+ A ++
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F+ + ++IVS+NS ++ QN L +EA N F M L + +++ +++SA H
Sbjct: 477 FSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQS 532
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
E FK+M + + P + +LG GSL +
Sbjct: 533 NEAMGAFKTMFCEHELPNSP----ILTILLGVCGSLGAS 567
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 211/437 (48%), Gaps = 61/437 (13%)
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
+ GRV EARE+FD MP ++++AW +M+ Y + DL+ ++ G M +I
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAI---- 101
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+++ YGRLG + EA +VF M +R+
Sbjct: 102 -----------------------------------LLSGYGRLGRVLEARRVFDGMLERN 126
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
V+WN++IS YV NG+I A RLF+ MP +D SW +M+TG+ + + LF MPE
Sbjct: 127 TVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE 186
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
++ V+WT +ISG+ E + +A+ F +M R+ + P+Q +S LSA L+ +
Sbjct: 187 RNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESL 246
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVD-AYRIFTNIDERNIVSYNSMISGFAQNGL 412
+K E DV I +++++YS+ +V+D A + F ++ ERN ++++MI+ + G
Sbjct: 247 RVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGR 306
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
+ A+ ++ + + + + ++ L+ C G +++ I F+ + EP +
Sbjct: 307 IDAAIAVYERDPVKS-IACRTALITGLAQC---GRIDDARILFEQIP-----EPIVVSWN 357
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG---AGRTHLNLDLAKLAAQHLMEL 529
++ + G + EA +L + M F G + G GR+ L L L EL
Sbjct: 358 ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGL-------LQEL 410
Query: 530 EPDSATPYVVLSDLYSV 546
P LS L S+
Sbjct: 411 HRSGMLPS--LSSLTSI 425
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/594 (34%), Positives = 336/594 (56%), Gaps = 7/594 (1%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW---RDSVCSNALIS 79
+ EA + + N+ SY ++ VR +A+ L +M D+ N L+
Sbjct: 7 LREAIDALYSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLH 66
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
Y K G +A +F+ M +DV +W +M+ Y K G V + R +FD+M + V++ +
Sbjct: 67 LYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTV 126
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ G+ C + F+ M+ G T + AC + + G Q+HG +
Sbjct: 127 IAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSL 186
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ + N++ MY + G +D+A +F M ++ VSWNS+ISGY+ NG+ E +LF
Sbjct: 187 GESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCE 246
Query: 260 MPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
M D V+ + +++ + G ++++ + F + EKD V WT ++ G N + E+A
Sbjct: 247 MQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDA 306
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F EML ++VRP+ T+SSV+S+ A A+L QG +H V ++ D+ + ++LV +
Sbjct: 307 LLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDM 366
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
YSKCG DA+ +F + RN++S+NSMI G+AQNG EAL L+ +M E L P+ ITF
Sbjct: 367 YSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITF 426
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+ VLSAC H GLVE G YF S+ ++ + P +HY+CM+++LGRAG + +A+DLI SMT
Sbjct: 427 VGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMT 486
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNR 555
FEP +W LL R + +++ ++AA+HL EL+P +A PY++LS++Y+ G+ +D
Sbjct: 487 FEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAA 546
Query: 556 VRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
VR K +I+K SWI + ++VH F+A ++ + ++I L + K +E
Sbjct: 547 VRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQE 600
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/576 (35%), Positives = 333/576 (57%), Gaps = 44/576 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
+ ++F+T ++ ++ I R G A +L+ MP R D+V N++I+GY K G
Sbjct: 38 SIKLFST---QDVYAFNVQIGNLARAGNIGAARQLFDEMPHR--DTVSWNSIITGYWKNG 92
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
+E+ R+F M K+VV+W SM+ G + R+ EA + F MP++N +W AM+ G ++
Sbjct: 93 CFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVR 152
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
D E+ LF M R ++I
Sbjct: 153 YDRVEEASRLFEEMPR---------------------------------------RNVIS 173
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
+++ Y ++G +++A +F+ M +++ VSW +ISGYV NG+ +EA LFE+MP K+
Sbjct: 174 YTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI 233
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
V+ T MITG+ +G +K+ LF+ +P +D +W A+I+G+ N EEA + +ML+
Sbjct: 234 VAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKM 293
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++P+ TL SVL+A ++ A+L +G + H V+K ES +SI N+L+++Y KCG+++D+
Sbjct: 294 GMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDS 353
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
F ID ++VS+N+MI+ FA++G + AL F +M+ + P+ ITFLS+LSAC H
Sbjct: 354 ELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHA 413
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
G V E +F SM Y I P PEH+AC+VDIL R G + +A +I M FE G+WGA
Sbjct: 414 GKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGA 473
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LL A HLN+ L +LAA+ ++ELEP ++ YVVLS++Y+ G + RVR + + +
Sbjct: 474 LLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGV 533
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
+K P SW+ + +KVH FL S ++ I + L+
Sbjct: 534 KKQPAYSWMEIDNKVHFFLGDDASHPEIHRIRLELK 569
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 174/362 (48%), Gaps = 43/362 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + S+N+MI I + I EA++ F MP RN S+ AMI+G VR EA L
Sbjct: 104 MPTKNVVSWNSMIAGCIEDE-RIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRL 162
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ + A++ GY K+G E+A +F M +K+VV+W M+ GY + G+ E
Sbjct: 163 FEEMPR--RNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDE 220
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMK-------------VDCF------------------ 149
A +F++MP+KN+VA TAM+ GY K + C
Sbjct: 221 AENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSG 280
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
E+ L M + GM + TL + AC +EG + H LV + G++ I + N++
Sbjct: 281 EEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNAL 340
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DF 265
ITMY + G + ++ F + D VSWN++I+ + +G + A F M D
Sbjct: 341 ITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDG 400
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFI 320
+++ ++++ G + +S+ FN M E + + ++ Q E+A++
Sbjct: 401 ITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQ 460
Query: 321 EM 322
EM
Sbjct: 461 EM 462
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 190/404 (47%), Gaps = 42/404 (10%)
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
SI TI F R Q H L + D+ N I R G + A ++F
Sbjct: 17 SIIRTIFLPIFHSFNR-----QFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFD 71
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
M RD VSWNS+I+GY NG +E+ RLF MP K+ VSW +MI G ++++ +
Sbjct: 72 EMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQY 131
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F MP+++ +W A+ISG V ++ EEA R F EM R++V ++ ++++ A +
Sbjct: 132 FQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNV----ISYTAMVDGYAKIGEI 187
Query: 348 NQGSQIHAHVVKMNMES---------------------------DVSIQNSLVSLYSKCG 380
Q + + + N+ S ++ ++++ Y K G
Sbjct: 188 EQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEG 247
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
A +F I R++ S+N+MI+G+AQNG GEEAL L +M G+ P+ T +SVL+
Sbjct: 248 KTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLT 307
Query: 441 ACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
AC+ + ++EG + +K+ Y E ++ + + GS+ ++ +L P
Sbjct: 308 ACSSLASLQEGRKTHVLVLKSGY--ESRISICNALITMYCKCGSILDS-ELAFRQIDHPD 364
Query: 500 PGVWGALLGAGRTHLNLD--LAKLAAQHLMELEPDSATPYVVLS 541
W A++ A H D LA +EPD T +LS
Sbjct: 365 VVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLS 408
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/611 (36%), Positives = 338/611 (55%), Gaps = 77/611 (12%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA I L +I A F MP+R SY A++ G+ R + A L+ MP+R
Sbjct: 21 NARIAHLARAG-NIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR-- 77
Query: 70 DSVCSNALISGYLKVGR---CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
D NALISG L + R + AA + VV++ S++ GY + G + +A +F
Sbjct: 78 DLASYNALISG-LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQ 136
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+MPE+N V++T ++ G + + LF M
Sbjct: 137 QMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP-------------------------- 170
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
D D++ ++++ Y + G + EA +F M KR+ VSW ++ISGY
Sbjct: 171 -------------DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQ 217
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE------------- 293
NGE+ A +LFE MP ++ VSWT M+ G+ G++E + ELFN MPE
Sbjct: 218 NGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGF 277
Query: 294 ------------------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+DD TW+A+I + NE EA F EML + VRPN ++
Sbjct: 278 GQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVI 337
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L+ AA A L+ G ++HA +++ + + DV ++L+++Y KCGN+ A R+F + +
Sbjct: 338 SILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPK 397
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+IV +NSMI+G+AQ+GLGE+AL +F M+ G+ P+ IT++ L+AC++ G V+EG F
Sbjct: 398 DIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIF 457
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
SM +I PG EHY+CMVD+LGR+G + EA DLI +M EP +WGAL+GA R H N
Sbjct: 458 NSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRN 517
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
++A++AA+ L+ELEP +A PYV+LS +Y+ +G+ D +++R + + KSPGCSWI
Sbjct: 518 AEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIE 577
Query: 576 LKDKVHLFLAG 586
+VHLF +G
Sbjct: 578 YDKRVHLFTSG 588
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 229/509 (44%), Gaps = 90/509 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPM-RNAVSYAAMITGFVRRGMFYEAEE 59
M R ASYNA+I+ L ++ +A A++P + VS+ +++ G+VR G+ +A
Sbjct: 74 MPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIR 133
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
L+ MP R+ V L+ G L GR EA R+F+ M ++DVVAW +M+ GYC+ GR+
Sbjct: 134 LFQQMPE--RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRIT 191
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EAR +FD+MP++NVV+WTAM+ GY + LF M N ++ T +
Sbjct: 192 EARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVG-- 245
Query: 180 RFFRYREGVQVHGLVSRFGF--DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
Y + V F ++ + N+++ +G+ G +D A VF M +RD +W
Sbjct: 246 ----YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTW 301
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGK---------------------------------- 263
+++I Y N + EA F M +
Sbjct: 302 SAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361
Query: 264 -----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
D + + +IT + GNL+K+ +F+ KD V W ++I+G+ + E+A
Sbjct: 362 CSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGI 421
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F +M + P+ +T L+A + T + +G +I + +++ +S+
Sbjct: 422 FHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIF---------NSMTVNSSI------ 466
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
Y+ M+ ++GL EEA +L + M E P+ + + ++
Sbjct: 467 ---------------RPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVE---PDAVIWGAL 508
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
+ AC + I + K L +EPG
Sbjct: 509 MGACR---MHRNAEIAEVAAKKLLELEPG 534
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 199/409 (48%), Gaps = 22/409 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M DR ++ AM++ I EA +F MP RN VS+ AMI+G+ + G A +L
Sbjct: 169 MPDRDVVAWTAMLSGYCQAG-RITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKL 227
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ V A++ GY++ G E+AA +F AM E V A +M+ G+ ++G V
Sbjct: 228 FEVMPE--RNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDA 285
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+ +F+KM E++ W+AM+ Y + + + F M G+ N ++ + C
Sbjct: 286 AKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAA 345
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G +VH + R FD D+ +++ITMY + G +D+A +VF +D V WNS+
Sbjct: 346 LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSM 405
Query: 241 ISGYVHNGEIEEAYRLFE--RMPG--KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I+GY +G E+A +F R+ G D +++ +T S G +++ E+FN M
Sbjct: 406 ITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSS 465
Query: 297 VT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ ++ ++ + EEAF M V P+ + +++ A +++ +
Sbjct: 466 IRPGAEHYSCMVDLLGRSGLVEEAFDLIKNM---PVEPDAVIWGALMGA----CRMHRNA 518
Query: 352 QIHAHVVKMNMESDVSIQNSLVSL---YSKCGNVVDAYRIFTNIDERNI 397
+I K +E + V L Y+ G DA ++ I RN+
Sbjct: 519 EIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNL 567
>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 647
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/609 (37%), Positives = 344/609 (56%), Gaps = 49/609 (8%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N I+ LI + + EA +F +M R+ V++ +MITG+V R A +L+ MP R
Sbjct: 43 NKKISNLIRSG-RLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPR--R 99
Query: 70 DSVCSNALISGYLKVGR---CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
D V N ++SGY EE R+FE M ++D V+W +++ GY K GR+ +A ++F+
Sbjct: 100 DVVSWNLIVSGYFSCRGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFN 159
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR----------GGMAFN---SITLTI 173
MPE+N V+ A++ G++ + D F +M G+ N + I
Sbjct: 160 AMPERNAVSSNALITGFLLNGDVDSAVDFFRTMPEHYSTSLSALISGLVRNGELDMAAGI 219
Query: 174 LFEACG---------------------------RFFRYREGVQVHGLVSRFGFDYDIILG 206
L E CG R F + G + F +++
Sbjct: 220 LCE-CGNGDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSW 278
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
NS++ Y + G + A ++F M ++D SWN++ISGYV +EEA +LF MP D +
Sbjct: 279 NSMMMCYVKAGDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPIPDVL 338
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
SW +++GF+ KG+L + + F MP K+ ++W +II+G+ NE Y+ A + F M +
Sbjct: 339 SWNLIVSGFAQKGDLNLAKDFFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEG 398
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
RP++ TLSSV+S L G QIH V K+ + D I NSL+++YS+CG +VDA
Sbjct: 399 ERPDRHTLSSVMSVCTGLVNLYLGKQIHQLVTKIVI-PDSPINNSLITMYSRCGAIVDAC 457
Query: 387 RIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+F I ++++++N+MI G+A +GL EAL LF+ MK + P ITF+SV++AC H
Sbjct: 458 TVFNEIKLYKDVITWNAMIGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHA 517
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GLVEEG FKSM Y IE EH+A +VDILGR G L EA+DLIN+M F+P VWGA
Sbjct: 518 GLVEEGRRQFKSMINDYGIERRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGA 577
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LL A R H N++LA +AA L+ LEP+S+ PYV+L ++Y+ +G+ D VR+ + K +
Sbjct: 578 LLSACRVHNNVELALVAADALIRLEPESSAPYVLLYNIYANLGQWDDAESVRVLMEEKNV 637
Query: 566 RKSPGCSWI 574
+K G SW+
Sbjct: 638 KKQAGYSWV 646
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K N S ++ N +S + G + +A +F ++ R+ V++NSMI+G+ A
Sbjct: 32 KYNNSSPLNRSNKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQ 91
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M +V + +S +C VEEG + L+ + P + + I
Sbjct: 92 LFDEMPRRDVVSWNL-IVSGYFSCRGSRFVEEG-------RRLFELMPQRDCVSWNTVIS 143
Query: 479 GRA--GSLAEAIDLINSM 494
G A G + +A+ L N+M
Sbjct: 144 GYAKNGRMDQALKLFNAM 161
>gi|359477774|ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 691
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 332/593 (55%), Gaps = 47/593 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R SYN MI L+ I A EIF MP R+ VS+ +MI+G+V G+ EA +
Sbjct: 98 MPERDIFSYNTMIAGLMKFG-DINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRV 156
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ M + D V N +I+G + VG+ + A F+ M +D+ +W +M+ G GR++E
Sbjct: 157 FSGMVLK--DVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVE 214
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +F+ MP ++V AW M+ GY++ C E G LF M + R
Sbjct: 215 ARGLFEDMPVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQ------------------R 256
Query: 181 FFR-YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
FR + E ++GLV R + +A ++F M ++ SWNS
Sbjct: 257 DFRSWNE--MINGLV--------------------RNQRIQDAMRLFVEMPQKCRRSWNS 294
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
++ G + NG I+EA+ E+ P D VSWT +I G+ G ++ ++ +F +MP +D W
Sbjct: 295 IVFGLIRNGLIKEAHAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDATAW 354
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
II G N+ EE ++F++M P++ T +SVL+ + TL+ G QIHA V K
Sbjct: 355 NVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTK 414
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
V++ N++V+LY++CGN A +F+ + + +S+NS+I G A NG G EA+ +
Sbjct: 415 TGFNYFVAVSNAMVTLYARCGNSNSALLLFSAMRSHDFISWNSIICGLAHNGNGVEAIEV 474
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F KM+ + PN ITF+ VLSAC+H GLV++G YF MK +EP EHY C+VD+LG
Sbjct: 475 FEKMRSIDIKPNHITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLG 534
Query: 480 RAGSLAEAIDLINSMT---FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
R G + EA+ + M E P VWGA+LGA R H N+ + ++A + ++E+EP ++
Sbjct: 535 RFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNMQVGEIAGERILEIEPHNSGV 594
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
Y++L+++Y GK+ D RV ++ + K ++K P CSW+ + H+FL+G S
Sbjct: 595 YIILAEMYLSSGKREDAERVWVRMREKGVKKQPACSWMEVNGSGHVFLSGDSS 647
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 208/434 (47%), Gaps = 45/434 (10%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+ IS ++ G EEA +F+ M +++ V + +M+ GY + G E +FD+MPE+++
Sbjct: 45 NSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDIF 104
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNS-ITLTILFEACGRFFRYREGVQVHG 192
++ M+ G MK ++F M R +++NS I+ + G R G+ +
Sbjct: 105 SYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVLK- 163
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
D++ N +I +G +D A + F M RD SW ++ISG G I E
Sbjct: 164 ---------DVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVE 214
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A LFE MP +D +W TMI G+ G +E LF MP++D +W +I+G V N++
Sbjct: 215 ARGLFEDMPVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRI 274
Query: 313 EEAFRWFIEMLRKDVRP-NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
++A R F+EM +K R N + + + A HA + K VS N
Sbjct: 275 QDAMRLFVEMPQKCRRSWNSIVFGLIRNGLIKEA--------HAFLEKSPFSDTVSWTNL 326
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+V Y + G V A IF + R+ ++N +I G +N GEE L F KMK+ G P+
Sbjct: 327 IVG-YFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPD 385
Query: 432 QITFLSVLSACN-----------HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+ TF SVL+ C+ H + + GF YF ++ MV + R
Sbjct: 386 EATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSN------------AMVTLYAR 433
Query: 481 AGSLAEAIDLINSM 494
G+ A+ L ++M
Sbjct: 434 CGNSNSALLLFSAM 447
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/611 (36%), Positives = 337/611 (55%), Gaps = 77/611 (12%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA I L +I A F MP+R SY A++ G+ R + A L+ MP+R
Sbjct: 21 NARIAHLARAG-NIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR-- 77
Query: 70 DSVCSNALISGYLKVGR---CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
D NALISG L + R + AA + VV++ S++ GY + G + +A +F
Sbjct: 78 DLASYNALISG-LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQ 136
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+MPE+N V++T ++ G + + LF M
Sbjct: 137 QMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP-------------------------- 170
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
D D++ ++++ Y + G + EA +F M KR+ VSW ++ISGY
Sbjct: 171 -------------DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQ 217
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE------------- 293
NGE+ A +LFE MP ++ VSWT M+ G+ G++E + ELFN MPE
Sbjct: 218 NGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGF 277
Query: 294 ------------------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+DD TW+A+I + NE EA F EML + VRPN ++
Sbjct: 278 GQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVI 337
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L+ AA A L+ G ++HA +++ + + DV ++L+++Y KCGN+ A R+F + +
Sbjct: 338 SILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPK 397
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+IV +NSMI+G+AQ+GLGE+AL +F M+ G+ P+ IT++ L+AC++ G V+EG F
Sbjct: 398 DIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIF 457
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
SM +I PG EHY+CMVD+LGR+G + EA DLI +M EP +WGAL+GA R H N
Sbjct: 458 NSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRN 517
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
++A+ AA+ L+ELEP +A PYV+LS +Y+ +G+ D +++R + + KSPGCSWI
Sbjct: 518 AEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIE 577
Query: 576 LKDKVHLFLAG 586
+VHLF +G
Sbjct: 578 YDKRVHLFTSG 588
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 229/509 (44%), Gaps = 90/509 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPM-RNAVSYAAMITGFVRRGMFYEAEE 59
M R ASYNA+I+ L ++ +A A++P + VS+ +++ G+VR G+ +A
Sbjct: 74 MPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIR 133
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
L+ MP R+ V L+ G L GR EA R+F+ M ++DVVAW +M+ GYC+ GR+
Sbjct: 134 LFQQMPE--RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRIT 191
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EAR +FD+MP++NVV+WTAM+ GY + LF M N ++ T +
Sbjct: 192 EARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVG-- 245
Query: 180 RFFRYREGVQVHGLVSRFGF--DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
Y + V F ++ + N+++ +G+ G +D A VF M +RD +W
Sbjct: 246 ----YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTW 301
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGK---------------------------------- 263
+++I Y N + EA F M +
Sbjct: 302 SAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361
Query: 264 -----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
D + + +IT + GNL+K+ +F+ KD V W ++I+G+ + E+A
Sbjct: 362 CSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGI 421
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F +M + P+ +T L+A + T + +G +I + +++ +S+
Sbjct: 422 FHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIF---------NSMTVNSSI------ 466
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
Y+ M+ ++GL EEA +L + M E P+ + + ++
Sbjct: 467 ---------------RPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVE---PDAVIWGAL 508
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
+ AC + I + K L +EPG
Sbjct: 509 MGACR---MHRNAEIAEFAAKKLLELEPG 534
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 199/409 (48%), Gaps = 22/409 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M DR ++ AM++ I EA +F MP RN VS+ AMI+G+ + G A +L
Sbjct: 169 MPDRDVVAWTAMLSGYCQAG-RITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKL 227
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ V A++ GY++ G E+AA +F AM E V A +M+ G+ ++G V
Sbjct: 228 FEVMPE--RNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDA 285
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+ +F+KM E++ W+AM+ Y + + + F M G+ N ++ + C
Sbjct: 286 AKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAA 345
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G +VH + R FD D+ +++ITMY + G +D+A +VF +D V WNS+
Sbjct: 346 LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSM 405
Query: 241 ISGYVHNGEIEEAYRLFE--RMPG--KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I+GY +G E+A +F R+ G D +++ +T S G +++ E+FN M
Sbjct: 406 ITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSS 465
Query: 297 VT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ ++ ++ + EEAF M V P+ + +++ A +++ +
Sbjct: 466 IRPGAEHYSCMVDLLGRSGLVEEAFDLIKNM---PVEPDAVIWGALMGA----CRMHRNA 518
Query: 352 QIHAHVVKMNMESDVSIQNSLVSL---YSKCGNVVDAYRIFTNIDERNI 397
+I K +E + V L Y+ G DA ++ I RN+
Sbjct: 519 EIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNL 567
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/610 (36%), Positives = 337/610 (55%), Gaps = 75/610 (12%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA I L +I A F MP+R SY A++ G+ R + A L+ MP+R
Sbjct: 21 NARIAHLARAG-NIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR-- 77
Query: 70 DSVCSNALISGY-LKVGRCEEAARIFEAM-VEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
D NALISG L+ +AA ++ VV++ S++ GY + G + +A +F +
Sbjct: 78 DLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
MPE+N V++T ++ G + + LF M
Sbjct: 138 MPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP--------------------------- 170
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
D D++ ++++ Y + G + EA +F M KR+ VSW ++ISGY N
Sbjct: 171 ------------DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQN 218
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE-------------- 293
GE+ A +LFE MP ++ VSWT M+ G+ G++E + ELFN MPE
Sbjct: 219 GEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFG 278
Query: 294 -----------------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
+DD TW+A+I + NE EA F EML + VRPN ++ S
Sbjct: 279 QRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVIS 338
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L+ AA A L+ G ++HA +++ + + DV ++L+++Y KCGN+ A R+F + ++
Sbjct: 339 ILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKD 398
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
IV +NSMI+G+AQ+GLGE+AL +F M+ G+ P+ IT++ L+AC++ G V+EG F
Sbjct: 399 IVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFN 458
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
SM +I PG EHY+CMVD+LGR+G + EA DLI +M EP +WGAL+GA R H N
Sbjct: 459 SMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNA 518
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
++A+ AA+ L+ELEP +A PYV+LS +Y+ +G+ D +++R + + KSPGCSWI
Sbjct: 519 EIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEY 578
Query: 577 KDKVHLFLAG 586
+VHLF +G
Sbjct: 579 DKRVHLFTSG 588
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 229/509 (44%), Gaps = 90/509 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPM-RNAVSYAAMITGFVRRGMFYEAEE 59
M R ASYNA+I+ L ++ +A A++P + VS+ +++ G+VR G+ +A
Sbjct: 74 MPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIR 133
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
L+ MP R+ V L+ G L GR EA R+F+ M ++DVVAW +M+ GYC+ GR+
Sbjct: 134 LFQQMPE--RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRIT 191
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EAR +FD+MP++NVV+WTAM+ GY + LF M N ++ T +
Sbjct: 192 EARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVG-- 245
Query: 180 RFFRYREGVQVHGLVSRFGF--DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
Y + V F ++ + N+++ +G+ G +D A VF M +RD +W
Sbjct: 246 ----YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTW 301
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGK---------------------------------- 263
+++I Y N + EA F M +
Sbjct: 302 SAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361
Query: 264 -----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
D + + +IT + GNL+K+ +F+ KD V W ++I+G+ + E+A
Sbjct: 362 CSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGI 421
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F +M + P+ +T L+A + T + +G +I + +++ +S+
Sbjct: 422 FHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIF---------NSMTVNSSI------ 466
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
Y+ M+ ++GL EEA +L + M E P+ + + ++
Sbjct: 467 ---------------RPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVE---PDAVIWGAL 508
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
+ AC + I + K L +EPG
Sbjct: 509 MGACR---MHRNAEIAEFAAKKLLELEPG 534
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 199/409 (48%), Gaps = 22/409 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M DR ++ AM++ I EA +F MP RN VS+ AMI+G+ + G A +L
Sbjct: 169 MPDRDVVAWTAMLSGYCQAG-RITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKL 227
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ V A++ GY++ G E+AA +F AM E V A +M+ G+ ++G V
Sbjct: 228 FEVMPE--RNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDA 285
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+ +F+KM E++ W+AM+ Y + + + F M G+ N ++ + C
Sbjct: 286 AKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAA 345
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G +VH + R FD D+ +++ITMY + G +D+A +VF +D V WNS+
Sbjct: 346 LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSM 405
Query: 241 ISGYVHNGEIEEAYRLFE--RMPG--KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I+GY +G E+A +F R+ G D +++ +T S G +++ E+FN M
Sbjct: 406 ITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSS 465
Query: 297 VT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ ++ ++ + EEAF M V P+ + +++ A +++ +
Sbjct: 466 IRPGAEHYSCMVDLLGRSGLVEEAFDLIKNM---PVEPDAVIWGALMGA----CRMHRNA 518
Query: 352 QIHAHVVKMNMESDVSIQNSLVSL---YSKCGNVVDAYRIFTNIDERNI 397
+I K +E + V L Y+ G DA ++ I RN+
Sbjct: 519 EIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNL 567
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/579 (35%), Positives = 334/579 (57%), Gaps = 51/579 (8%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM-VEKDV 102
MIT + G EA L+ M R D + +ISGY+K G EEA R+F+ + +K+V
Sbjct: 73 MITNLSKDGRIMEARRLFDEM--REPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNV 130
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
V W +MV GY + ++ +A ++F++MP KNVV+W M+DGY + + LF M
Sbjct: 131 VTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMP-- 188
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
+ +++ N++++M + G ++EA
Sbjct: 189 -------------------------------------ERNVVSWNTVMSMLAQCGRIEEA 211
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
++F M +RD +SW ++I+G ++EA LFERMP +D SW TMITG G+L
Sbjct: 212 RRLFDRMPERDVISWTAMIAGL-----LDEALDLFERMPERDLPSWNTMITGLIQNGDLR 266
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSAS 341
++ +LFN MP+K+ ++WT +I+G V + EEA + F ML + +PNQ T SVL A
Sbjct: 267 RARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGAC 326
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN--IDERNIVS 399
+ A L +G Q+H + K + + ++L+++YSKCG + A ++F + +R++VS
Sbjct: 327 SNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVS 386
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+N +I+ +A +G G+EA+N F++M+ G P+ +T++ +LSAC+H GLVEEG YF +
Sbjct: 387 WNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELV 446
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
+I +HYAC+VD+ GRAG L EA I + +P VWGALL H N+ +
Sbjct: 447 KDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIG 506
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
K AA+ L+E+EP++A Y++LS++Y+ GK R+ RVR+K K K ++K PGCSWI + ++
Sbjct: 507 KQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNR 566
Query: 580 VHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDW 617
VH+F+ G KS K I L+ + K+ + P +D+
Sbjct: 567 VHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPNNDF 605
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 212/465 (45%), Gaps = 76/465 (16%)
Query: 2 ADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
A + ++ AM+ I +N I +A ++F MP +N VS+ MI G+ + G A L+
Sbjct: 126 AKKNVVTWTAMVGGYIRSN-KISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLF 184
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV------------------ 103
MP R+ V N ++S + GR EEA R+F+ M E+DV+
Sbjct: 185 EKMPE--RNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALDLFE 242
Query: 104 --------AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
+W +M+ G + G + AR++F++MP+KNV++WT M+ G ++ E+ +
Sbjct: 243 RMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKI 302
Query: 156 FLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
F M G N T + AC EG QVH ++S+ + + +++I MY
Sbjct: 303 FSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYS 362
Query: 215 RLGFMDEANKVF--SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSW 268
+ G + A K+F M S+RD VSWN +I+ Y H+G +EA F+ M F V++
Sbjct: 363 KCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTY 422
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEML 323
+++ S G +E+ ++ F+ + + + + ++ + +EAF FIE
Sbjct: 423 VGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFG-FIE-- 479
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
R + +P+ ++L+ A + G Q ++++ E+
Sbjct: 480 RLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPEN------------------A 521
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
Y + +NI +A G EA + KMKD+GL
Sbjct: 522 GTYLLLSNI--------------YASTGKWREAARVRLKMKDKGL 552
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 174/343 (50%), Gaps = 32/343 (9%)
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
F D ++ N +IT + G + EA ++F M + D ++W ++ISGY+ G IEEA RL
Sbjct: 61 FTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRL 120
Query: 257 FERMPG-KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
F+R+ K+ V+WT M+ G+ + + +LFN MP K+ V+W +I G+ N + + A
Sbjct: 121 FDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSA 180
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM------------- 362
F +M ++V ++ ++V+S A + + ++ + + ++
Sbjct: 181 MYLFEKMPERNV----VSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDE 236
Query: 363 ---------ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
E D+ N++++ + G++ A ++F + ++N++S+ +MI+G Q G
Sbjct: 237 ALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGES 296
Query: 414 EEALNLFRKM-KDEGLVPNQITFLSVLSAC-NHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
EEAL +F +M G PNQ TF+SVL AC N GL E ++ KT+Y +
Sbjct: 297 EEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVY--QDSTFVV 354
Query: 472 ACMVDILGRAGSLAEAIDLI-NSMTFEPPPGVWGALLGAGRTH 513
+ ++++ + G L A + + MT + W ++ A H
Sbjct: 355 SALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHH 397
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 165/426 (38%), Gaps = 98/426 (23%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+ AMI L++ EA ++F MP R+ S+ MITG ++ G A +L
Sbjct: 218 MPERDVISWTAMIAGLLD------EALDLFERMPERDLPSWNTMITGLIQNGDLRRARKL 271
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMV---------------------- 98
+ MP ++ + +I+G ++ G EEA +IF M+
Sbjct: 272 FNEMPK--KNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNL 329
Query: 99 ------------------EKDVVAWGSMVDGYCKKGRVIEAREIFDK--MPEKNVVAWTA 138
+ ++++ Y K G + AR++FD ++++V+W
Sbjct: 330 AGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNG 389
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ Y ++ + F MR+ G + +T L AC EG
Sbjct: 390 IIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEG----------- 438
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
L + DE K S++ + D + L+ G ++EA+ E
Sbjct: 439 -----------------LKYFDELVKDRSILVRED--HYACLVDLCGRAGRLKEAFGFIE 479
Query: 259 RMPGKDFVS-WTTMITGFSSKGNL----EKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
R+ K W ++ G + N+ + + +L + PE T+ + + + + ++
Sbjct: 480 RLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAG-TYLLLSNIYASTGKWR 538
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EA R ++M K L + + G+++H VV S + SL+
Sbjct: 539 EAARVRLKMKDKG-----------LKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLL 587
Query: 374 -SLYSK 378
L+SK
Sbjct: 588 RDLHSK 593
>gi|297837203|ref|XP_002886483.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
gi|297332324|gb|EFH62742.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
Length = 1243
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/589 (37%), Positives = 347/589 (58%), Gaps = 22/589 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRG---MFYEAEEL 60
R ++N MI+ + + +A ++F MP R+ V++ AMI+G+V G EA +L
Sbjct: 413 RNIVTWNTMISGYVKRR-EMTQARKLFDEMPERDVVTWNAMISGYVSCGGIRFLEEARKL 471
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP+R DS N +ISGY K R EA +FE M E++ V+W +M+ G+C G V
Sbjct: 472 FDEMPSR--DSFSWNTMISGYAKNRRISEALLLFEKMPERNAVSWSAMITGFCHNGEVNR 529
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF-----LSMRRGGMAFNSITLTILF 175
A ++F +MP K+ + A+V G +K + E+ + L R + + TL + +
Sbjct: 530 AFDLFRRMPVKDSSSLCALVAGLIKNERLEEAAWVLGQYGSLDSGREDLVYAYNTLIVGY 589
Query: 176 EACGRFFRYREGV-QV--------HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
G+ R Q+ HG R F +++ NS+I Y ++G + A +F
Sbjct: 590 GQRGQVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVSWNSMIKAYLKVGDVVSARLLF 649
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
M RD +SWN++I GYVH +++A+ LF MP +D SW M++G++S GNLE +
Sbjct: 650 DQMKDRDTISWNTMIDGYVHVSRMDDAFALFSEMPNRDAHSWNMMVSGYASVGNLELARH 709
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
F PEK+ V+W +II+ + N+ Y+EA FI M +P+ TL+S+LS S
Sbjct: 710 YFEKTPEKNIVSWNSIIAAYDKNKDYKEAVDVFIRMNIDGEKPDPHTLTSLLSVSTGLVN 769
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMIS 405
L G Q+H VVK + DV + N+L+++YS+CG ++++ RIF + +R ++++N++I
Sbjct: 770 LRLGMQMHQIVVK-TVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAIIG 828
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G+A +G EALNLF MK G+ P+ ITF+SVL+AC H GLV+E F SM ++Y IE
Sbjct: 829 GYAFHGNASEALNLFWSMKCYGIHPSHITFVSVLNACAHAGLVDEAKEQFLSMMSVYKIE 888
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
P EHY+ +V+++ G EA+ +I SM FEP VWGALL A R + N+ LA +AA+
Sbjct: 889 PQMEHYSSLVNVISGQGQFEEAMYVIKSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEA 948
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+ LEP+S+TPYV+L ++Y+ +G + ++VRM + KRI+K G SW+
Sbjct: 949 MSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 997
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 219/495 (44%), Gaps = 99/495 (20%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+N ++ ++ G EA IFE + +++V W +M+ GY K+ + +AR++FD+MPE++V
Sbjct: 387 TNKELNQMIRSGYIAEAREIFEKLEARNIVTWNTMISGYVKRREMTQARKLFDEMPERDV 446
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V W AM+ GY V C GG+ F E + F +
Sbjct: 447 VTWNAMISGY--VSC-------------GGIRF--------LEEARKLF--------DEM 475
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
SR F + N++I+ Y + + EA +F M +R+AVSW+++I+G+ HNGE+ A
Sbjct: 476 PSRDSFSW-----NTMISGYAKNRRISEALLLFEKMPERNAVSWSAMITGFCHNGEVNRA 530
Query: 254 YRLFERMPGKDFVS-------------------------------------WTTMITGFS 276
+ LF RMP KD S + T+I G+
Sbjct: 531 FDLFRRMPVKDSSSLCALVAGLIKNERLEEAAWVLGQYGSLDSGREDLVYAYNTLIVGYG 590
Query: 277 SKGNLEKSIELFNMMPEKDD----------------VTWTAIISGFVNNEQYEEAFRWFI 320
+G +E + LF+ +P+ D V+W ++I ++ A F
Sbjct: 591 QRGQVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVSWNSMIKAYLKVGDVVSARLLFD 650
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+M +D ++ ++++ + ++ + + + + S N +VS Y+ G
Sbjct: 651 QMKDRDT----ISWNTMIDGYVHVSRMDDAFALFSEMPNRDAHS----WNMMVSGYASVG 702
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
N+ A F E+NIVS+NS+I+ + +N +EA+++F +M +G P+ T S+LS
Sbjct: 703 NLELARHYFEKTPEKNIVSWNSIIAAYDKNKDYKEAVDVFIRMNIDGEKPDPHTLTSLLS 762
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
GLV + + P + ++ + R G + E+ + + M +
Sbjct: 763 VST--GLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREV 820
Query: 501 GVWGALLGAGRTHLN 515
W A++G H N
Sbjct: 821 ITWNAIIGGYAFHGN 835
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 128/520 (24%), Positives = 226/520 (43%), Gaps = 122/520 (23%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S S+N MI+ N I EA +F MP RNAVS++AMITGF G A +L
Sbjct: 475 MPSRDSFSWNTMISGYAKNR-RISEALLLFEKMPERNAVSWSAMITGFCHNGEVNRAFDL 533
Query: 61 YVNMPARWRDSVCS-----------------------------------NALISGYLKVG 85
+ MP + S+C+ N LI GY + G
Sbjct: 534 FRRMPVKDSSSLCALVAGLIKNERLEEAAWVLGQYGSLDSGREDLVYAYNTLIVGYGQRG 593
Query: 86 RCEEAARIFEAMVE----------------KDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
+ E A +F+ + + ++VV+W SM+ Y K G V+ AR +FD+M
Sbjct: 594 QVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVSWNSMIKAYLKVGDVVSARLLFDQMK 653
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+++ ++W M+DGY+ V +D F LF M
Sbjct: 654 DRDTISWNTMIDGYVHVSRMDDAFALFSEMP----------------------------- 684
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+ D N +++ Y +G ++ A F +++ VSWNS+I+ Y N +
Sbjct: 685 ----------NRDAHSWNMMVSGYASVGNLELARHYFEKTPEKNIVSWNSIIAAYDKNKD 734
Query: 250 IEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE---KDDVTWTAI 302
+EA +F RM D + T++++ + NL +++ ++ + D A+
Sbjct: 735 YKEAVDVFIRMNIDGEKPDPHTLTSLLSVSTGLVNLRLGMQMHQIVVKTVIPDVPVHNAL 794
Query: 303 ISGFVNNEQYEEAFRWFIEM-LRKDVRPNQLTLSSVLSASA----ATATLNQGSQIHAHV 357
I+ + + E+ R F EM L+++V +T ++++ A A+ LN + +
Sbjct: 795 ITMYSRCGEIMESRRIFDEMKLKREV----ITWNAIIGGYAFHGNASEALNLFWSMKCYG 850
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI-----DERNIVSYNSMISGFAQNGL 412
+ + + VS+ N+ + G V +A F ++ E + Y+S+++ + G
Sbjct: 851 IHPSHITFVSVLNAC----AHAGLVDEAKEQFLSMMSVYKIEPQMEHYSSLVNVISGQGQ 906
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSAC---NHVGLVE 449
EEA+ + + M E P++ + ++L AC N+VGL
Sbjct: 907 FEEAMYVIKSMPFE---PDKTVWGALLDACRIYNNVGLAH 943
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/556 (37%), Positives = 331/556 (59%), Gaps = 18/556 (3%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAM-VEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
RD V A+ISGY+K G +A R+F+ + KDVV W +M+ GY + R+ EA +F+
Sbjct: 4 RDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERLFEV 63
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEACGRFFRYRE 186
MP KNVV+W M+DGY K + ++F M R +++N++ ++ CGR R
Sbjct: 64 MPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALV--QCGRVEEARR 121
Query: 187 GVQVHGLVSRFGF--DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
RF D+I +++ R G +DEA KVF M +R+ VSWN++++GY
Sbjct: 122 ---------RFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGY 172
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
N ++EA+ LFERMP ++ SW TMITGF G L + ++FN MPEK+ V+WT +I+
Sbjct: 173 AKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMIT 232
Query: 305 GFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
G+V + E A + F+EM++ RPN+ T +VL A + A L +G Q+H + K +
Sbjct: 233 GYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQ 292
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTN--IDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ ++L+++YSKCG + A +IF + I +R++V +N MI+ +A +G G EA+ LF
Sbjct: 293 DRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFE 352
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
M+ G PN ++++ +LSAC+H GLV+EG YF + +I+ +H+AC+VD+ GRA
Sbjct: 353 DMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLVDLCGRA 412
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L EA D I + + +WG LL H +L++ +LAA+ L + +P++A Y++LS
Sbjct: 413 GRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKELEKEDPENAGTYLLLS 472
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
++Y+ K R+ +RVR+K K K ++K PGCSWI + ++VH+FLA KS I +
Sbjct: 473 NIYASGRKWREASRVRLKMKEKGLKKQPGCSWIEVGNRVHVFLARDKSHYQSNLIYSLVH 532
Query: 602 TISKGTKEFDWPKHDW 617
I K P +D+
Sbjct: 533 DIHAEMKAEHVPNNDF 548
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 170/305 (55%), Gaps = 12/305 (3%)
Query: 1 MADRTSASYNAMITALINNNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
M +R S+NA+I AL+ C + EA F MP R+ +S+ M+ G R G EA +
Sbjct: 95 MHERNMVSWNAVIAALVQ--CGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARK 152
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
++ MP R+ V NA+++GY K R +EA +FE M E+++ +W +M+ G+ + G +
Sbjct: 153 VFDRMPE--RNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELA 210
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEAC 178
AR++F++MPEKNVV+WT M+ GY++ E +F+ M + GG N T + AC
Sbjct: 211 WARKVFNEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGAC 270
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS--MMSKRDAVS 236
EG QVH L+S+ + + ++++ MY + G + A K+F ++S+RD V
Sbjct: 271 SDMAGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVL 330
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMP 292
WN +I+ Y H+G EA LFE M G F VS+ +++ S G +++ + F+ +
Sbjct: 331 WNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELG 390
Query: 293 EKDDV 297
+ +
Sbjct: 391 RDNSI 395
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 215/487 (44%), Gaps = 118/487 (24%)
Query: 1 MADRTSASYNAMITALINNNCS-IYEAFEIFATM-PMRNAVSYAAMITGFVRRGMFYEAE 58
M +R ++ A+I+ I C I +A +F + +++ V++ AM++G+VR EAE
Sbjct: 1 MHERDVVTWTAVISGYIK--CGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAE 58
Query: 59 ELYVNMPAR----W-------------------------RDSVCSNALISGYLKVGRCEE 89
L+ MP + W R+ V NA+I+ ++ GR EE
Sbjct: 59 RLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEE 118
Query: 90 AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
A R F+ M ++DV++W +MV G + GRV EAR++FD+MPE+NVV+W AMV GY K
Sbjct: 119 ARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRL 178
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
++ FDLF M + ++ N++
Sbjct: 179 DEAFDLFERMP---------------------------------------ERNLSSWNTM 199
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------- 260
IT + + G + A KVF+ M +++ VSW ++I+GYV GE E A ++F M
Sbjct: 200 ITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPN 259
Query: 261 --------------------------------PGKDFVSWTTMITGFSSKGNLEKSIELF 288
+ FV+ + ++ +S G L + ++F
Sbjct: 260 EGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVA-SALLNMYSKCGELSIARKIF 318
Query: 289 N--MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+ ++ ++D V W +I+ + ++ EA F +M +PN ++ +LSA +
Sbjct: 319 DDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGL 378
Query: 347 LNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS-YNSMI 404
+++G + + N ++ LV L + G + +AY + + S + ++
Sbjct: 379 VDEGLNYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLL 438
Query: 405 SGFAQNG 411
+G +G
Sbjct: 439 AGCNAHG 445
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 53/298 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+NAM+T N + EAF++F MP RN S+ MITGF++ G A ++
Sbjct: 157 MPERNVVSWNAMVTGYAKN-MRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKV 215
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVE------------------KDV 102
+ MP ++ V +I+GY++ G E A ++F M++ D+
Sbjct: 216 FNEMPE--KNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDM 273
Query: 103 VAWG----------------------SMVDGYCKKGRVIEAREIFDK--MPEKNVVAWTA 138
G ++++ Y K G + AR+IFD + ++++V W
Sbjct: 274 AGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNG 333
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ Y C + +LF M+ G N ++ L AC EG+ G
Sbjct: 334 MIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLN---YFDELG 390
Query: 199 FDYDIILGNS----IITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLISGYVHNGEIE 251
D I L ++ + GR G + EA + + + S W L++G +G++E
Sbjct: 391 RDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLE 448
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/602 (36%), Positives = 331/602 (54%), Gaps = 49/602 (8%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI-SGYLKVGRCE 88
RNAVS+ MI+ +V+ +A ++ M P + S NA S L+ GR
Sbjct: 168 RNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQV 227
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
A + EKDV ++VD Y K G + A +F+KMP +VV+W A + G +
Sbjct: 228 HGA-VVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGH 286
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
+L L M+ G+ N TL+ + +AC + G Q+HG + + D+D +
Sbjct: 287 DHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG 346
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--PGKDF- 265
++ MY + GF+D+A KVF M +RD + WN+LISG H+G E LF RM G D
Sbjct: 347 LVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLD 406
Query: 266 VSWTTMITGFSSK--------------------------------------GNLEKSIEL 287
V+ TT+ + S G L+ +I++
Sbjct: 407 VNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKV 466
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F D ++ T +++ + E+A + F++MLRK + P+ LSS+L+A + +
Sbjct: 467 FKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAY 526
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
QG Q+HAH++K SDV N+LV Y+KCG++ DA F+ + ER IVS+++MI G
Sbjct: 527 EQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGL 586
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
AQ+G G+ AL+LF +M DEG+ PN IT SVLSACNH GLV++ YF+SMK + I+
Sbjct: 587 AQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRT 646
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
EHYACM+DILGRAG L +A++L+N+M F+ VWGALLGA R H + +L ++AA+ L
Sbjct: 647 EEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLF 706
Query: 528 ELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGR 587
LEP+ + +V+L++ Y+ G + +VR K ++K P SW+ +KDKVH F+ G
Sbjct: 707 TLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGD 766
Query: 588 KS 589
KS
Sbjct: 767 KS 768
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 218/480 (45%), Gaps = 60/480 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F +P VS+++++T + GM +A + M R R C+ + LK
Sbjct: 56 ARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAM--RGRGVPCNEFALPVVLK-- 111
Query: 86 RCEEAARIFEAMVE---------KDVVAWGSMVDGYCKKGRVIEAREIFDKM----PEKN 132
C R F A V DV ++V Y G V EAR +FD+ E+N
Sbjct: 112 -CAPDVR-FGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERN 169
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
V+W M+ Y+K D D +F M G N + + AC G QVHG
Sbjct: 170 AVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHG 229
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V R G++ D+ N+++ MY +LG ++ A VF M D VSWN+ ISG V +G
Sbjct: 230 AVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHR 289
Query: 253 AYRLFERMPGKDFV-------------------SWTTMITGFSSK--------------- 278
A L +M V + I GF K
Sbjct: 290 ALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVD 349
Query: 279 -----GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK--DVRPNQ 331
G L+ + ++F+ MP +D + W A+ISG ++ ++ E F M ++ D+ N+
Sbjct: 350 MYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNR 409
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
TL+SVL ++A++ + Q+HA K+ + SD + N L+ Y KCG + A ++F
Sbjct: 410 TTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE 469
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+I+S +M++ +Q GE+A+ LF +M +GL P+ S+L+AC + E+G
Sbjct: 470 SRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 158/371 (42%), Gaps = 59/371 (15%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW-------RDSVCSN 75
I A +F MP + VS+ A I+G V G + A EL + M + SV
Sbjct: 256 IEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKA 315
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+G +GR + + +A+ + D +VD Y K G + +AR++FD MP ++++
Sbjct: 316 CAGAGAFNLGR-QIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLIL 374
Query: 136 WTAMVDGYMKVDCFEDG-----FDLFLSMRRGGMAF--NSITLTILFEACGRFFRYREGV 188
W A++ G C DG LF MR+ G+ N TL + ++
Sbjct: 375 WNALISG-----CSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTR 429
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
QVH L + G D + N +I Y + G +D A KVF D +S ++++
Sbjct: 430 QVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCD 489
Query: 249 EIEEAYRLFERMPGK---------------------------------------DFVSWT 269
E+A +LF +M K D +
Sbjct: 490 HGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGN 549
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
++ ++ G++E + F+ +PE+ V+W+A+I G + + A F ML + V P
Sbjct: 550 ALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAP 609
Query: 330 NQLTLSSVLSA 340
N +TL+SVLSA
Sbjct: 610 NHITLTSVLSA 620
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 12/281 (4%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+A ++F MP R+ + + A+I+G G E L+ M D + ++ LK
Sbjct: 359 DARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKS 418
Query: 85 GRCEEA---ARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
EA R A+ EK D ++D Y K G++ A ++F + ++++
Sbjct: 419 TASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISS 478
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
T M+ + D ED LF+ M R G+ +S L+ L AC Y +G QVH + +
Sbjct: 479 TTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIK 538
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
F D+ GN+++ Y + G +++A+ FS + +R VSW+++I G +G + A L
Sbjct: 539 RQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDL 598
Query: 257 FERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
F RM + ++ T++++ + G ++ + + F M E
Sbjct: 599 FHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKE 639
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T+ S L+ + +L G+ +H+H++K + + S N L++LYS+C A +F I
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGFS--NHLLTLYSRCRLPSAARAVFDEI 63
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ VS++S+++ ++ NG+ +AL FR M+ G+ N+ VL
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVL 110
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 321/539 (59%), Gaps = 31/539 (5%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+++SGY G +EA ++F+ M E++VV+W +V GY K ++EAR +F+ MPE+NVV
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC---GRFFRYRE----- 186
+WTAMV GYM+ + LF M N ++ T++F GR + R+
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 187 -------------GVQVHGLV--SRFGFD----YDIILGNSIITMYGRLGFMDEANKVFS 227
G+ G V +R FD +++ ++IT Y + +D A K+F
Sbjct: 168 PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 227
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
+M ++ VSW S++ GY +G IE+A FE MP K ++ MI GF G + K+ +
Sbjct: 228 VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRV 287
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F++M ++D+ TW +I + EA F +M ++ VRP+ +L S+LS A A+L
Sbjct: 288 FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 347
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
G Q+HAH+V+ + DV + + L+++Y KCG +V A +F ++I+ +NS+ISG+
Sbjct: 348 QYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGY 407
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
A +GLGEEAL +F +M G +PN++T +++L+AC++ G +EEG F+SM++ + + P
Sbjct: 408 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
EHY+C VD+LGRAG + +A++LI SMT +P VWGALLGA +TH LDLA++AA+ L
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLF 527
Query: 528 ELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
E EPD+A YV+LS + + K D VR + + K PGCSWI + KVH+F G
Sbjct: 528 ENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRG 586
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 179/395 (45%), Gaps = 96/395 (24%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M++R S+N +++ I N I EA +F MP RN VS+ AM+ G+++ GM EAE L
Sbjct: 74 MSERNVVSWNGLVSGYIKNRM-IVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESL 132
Query: 61 YVNMPAR----W-------------------------RDSVCSNALISGYLKVGRCEEAA 91
+ MP R W +D V S +I G + GR +EA
Sbjct: 133 FWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEAR 192
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT-------------- 137
IF+ M E++VV W +M+ GY + RV AR++F+ MPEK V+WT
Sbjct: 193 LIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIED 252
Query: 138 -----------------AMVDGYMKV----------DCFED----------------GF- 153
AM+ G+ +V D ED GF
Sbjct: 253 AEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFE 312
Query: 154 ----DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
DLF M++ G+ + +L + C + G QVH + R FD D+ + + +
Sbjct: 313 LEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVL 372
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DF 265
+TMY + G + +A VF S +D + WNS+ISGY +G EEA ++F MP +
Sbjct: 373 MTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNK 432
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
V+ ++T S G LE+ +E+F M K VT T
Sbjct: 433 VTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 156/318 (49%), Gaps = 23/318 (7%)
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
I+ R+G ++EA K F + + SWNS++SGY NG +EA +LF+ M ++ VSW
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+++G+ + ++ +F +MPE++ V+WTA++ G++ EA F M +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER---- 139
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N+++ + + +++ +++ M DV +++ + G V +A IF
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLY----DMMPVKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ ERN+V++ +MI+G+ QN + A LF M ++ ++++ S+L G +E
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIE 251
Query: 450 EGFIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+ +F+ M P AC M+ G G +++A + + M + W ++
Sbjct: 252 DAEEFFEVM-------PMKPVIACNAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMI 303
Query: 508 GA-GRTHLNLDLAKLAAQ 524
A R L+ L AQ
Sbjct: 304 KAYERKGFELEALDLFAQ 321
>gi|413952592|gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
Length = 683
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/622 (34%), Positives = 350/622 (56%), Gaps = 23/622 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRR---GMFYEAEEL 60
R+ ++N+++ AL + + A F MP+R+ +S+ +++ + R A L
Sbjct: 65 RSVVTWNSLLAAL-SRGSDVRAARCFFDAMPVRDIISWNTLLSAYARSLQPNDLAAARRL 123
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R D+V + L+ Y + G EEA R+F+ M ++ +W +M+ G+ G++ +
Sbjct: 124 FYEMPQR--DAVSWSTLLGAYTRRGLMEEAQRLFDEMPHRNASSWNTMITGFFAVGQMRK 181
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF------LSMRRGGMAFNSITLTIL 174
A +F MP+K+ + +AMV G+++ + DL + M + AFN TL
Sbjct: 182 ALNVFAAMPDKDSASLSAMVSGFIRNGRLHEADDLLTKRLTVMDMDKAVGAFN--TLIAA 239
Query: 175 FEACGRFFRYREGVQV-------HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ GR R + H R F+ +++ NS++ Y R G + A +F
Sbjct: 240 YGQTGRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCYIRTGDVCSARALFD 299
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
M +D VSWN++I+GY E+EEA +LF +P D V+W MI GF+ KG++E +
Sbjct: 300 EMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVPDPDAVTWNLMIRGFTQKGDVEHARGF 359
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ MPE+ +TW +ISG+ NE Y+ + F ML RP+ TLSSVL+A A+ A L
Sbjct: 360 FDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEVGERPDHHTLSSVLAACASLAML 419
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISG 406
G+Q+H +++ + D + N+L+++YS+CG ++ A IF ++ +R+IVS+N++I G
Sbjct: 420 RLGAQLH-QLIEKSFLPDTATNNALMTMYSRCGELISAKAIFGHMHTQRDIVSWNALIGG 478
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+ Q G EAL LF +M+ ++P ITF+S+LSAC + GLV EG + F +M Y +
Sbjct: 479 YEQQGNATEALRLFEEMRSAKVMPTHITFISLLSACGNAGLVSEGRVVFHTMVHDYGLAA 538
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL 526
EHYA +V+++GR G L +A++LI SM P VWGA LGA N LA++AA L
Sbjct: 539 SVEHYAALVNLIGRHGQLEDALELIKSMPIAPDRAVWGAFLGACTAKKNEPLAEMAANAL 598
Query: 527 MELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+++PDS+ PYV++ +L++ G+ + VR + I K PG SWI L DKVH+F++G
Sbjct: 599 SKIDPDSSAPYVLMHNLHAHEGRWGSASLVREDMERLGIHKHPGYSWIDLHDKVHVFISG 658
Query: 587 RKSCLDLKEIEVTLQTISKGTK 608
S EI L+ ++ +
Sbjct: 659 DTSHPLTHEIFSVLECFNRSCR 680
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 152/331 (45%), Gaps = 54/331 (16%)
Query: 1 MADRTSASYNAMITALINN-----------------------------------NCSIYE 25
M D+ SAS +AM++ I N + +
Sbjct: 189 MPDKDSASLSAMVSGFIRNGRLHEADDLLTKRLTVMDMDKAVGAFNTLIAAYGQTGRVTD 248
Query: 26 AFEIFATMPM--------------RNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS 71
A +F+ +P RN VS+ +M+ ++R G A L+ MP +D
Sbjct: 249 ARRLFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPH--KDL 306
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
V N +I+GY + EEA ++F + + D V W M+ G+ +KG V AR FD+MPE+
Sbjct: 307 VSWNTMIAGYTQASEMEEAEKLFWEVPDPDAVTWNLMIRGFTQKGDVEHARGFFDRMPER 366
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+ + W M+ GY + + ++ LF M G + TL+ + AC R G Q+H
Sbjct: 367 STITWNTMISGYEQNEDYDSTIKLFQRMLEVGERPDHHTLSSVLAACASLAMLRLGAQLH 426
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS-MMSKRDAVSWNSLISGYVHNGEI 250
L+ + F D N+++TMY R G + A +F M ++RD VSWN+LI GY G
Sbjct: 427 QLIEK-SFLPDTATNNALMTMYSRCGELISAKAIFGHMHTQRDIVSWNALIGGYEQQGNA 485
Query: 251 EEAYRLFERM-PGKDFVSWTTMITGFSSKGN 280
EA RLFE M K + T I+ S+ GN
Sbjct: 486 TEALRLFEEMRSAKVMPTHITFISLLSACGN 516
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 208/484 (42%), Gaps = 96/484 (19%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N + G L+ GR A R+F+A+ + VV W S++ + V AR FD MP ++++
Sbjct: 40 NRSLVGLLRRGRFSAARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDAMPVRDII 99
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W ++ Y + S++ +A A R F + +
Sbjct: 100 SWNTLLSAYAR------------SLQPNDLA-----------AARRLF--------YEMP 128
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
R + +LG Y R G M+EA ++F M R+A SWN++I+G+ G++ +A
Sbjct: 129 QRDAVSWSTLLG-----AYTRRGLMEEAQRLFDEMPHRNASSWNTMITGFFAVGQMRKAL 183
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIE---------------------------- 286
+F MP KD S + M++GF G L ++ +
Sbjct: 184 NVFAAMPDKDSASLSAMVSGFIRNGRLHEADDLLTKRLTVMDMDKAVGAFNTLIAAYGQT 243
Query: 287 --------LFNMMP--------------EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
LF+M+P E++ V+W +++ ++ A F EM
Sbjct: 244 GRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCYIRTGDVCSARALFDEMPH 303
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
KD+ ++ +++++ + + + ++ V + D N ++ +++ G+V
Sbjct: 304 KDL----VSWNTMIAGYTQASEMEEAEKLFWEVP----DPDAVTWNLMIRGFTQKGDVEH 355
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A F + ER+ +++N+MISG+ QN + + LF++M + G P+ T SVL+AC
Sbjct: 356 ARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEVGERPDHHTLSSVLAACAS 415
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
+ ++ G + ++ + P ++ + R G L A + M + W
Sbjct: 416 LAMLRLGAQLHQLIEKSF--LPDTATNNALMTMYSRCGELISAKAIFGHMHTQRDIVSWN 473
Query: 505 ALLG 508
AL+G
Sbjct: 474 ALIG 477
>gi|15226879|ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana]
gi|209414526|gb|ACI46503.1| At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 343/584 (58%), Gaps = 43/584 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I EA ++F +P R+ V++ +ITG+++ G EA EL+ + +R ++ V A++SGYL
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR-KNVVTWTAMVSGYL 120
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ + A +F+ M E++VV+W +M+DGY + GR+ +A E+FD+MPE+N+V+W +MV
Sbjct: 121 RSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKA 180
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
++ ++ +LF M R D
Sbjct: 181 LVQRGRIDEAMNLFERMPR---------------------------------------RD 201
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
++ +++ + G +DEA ++F M +R+ +SWN++I+GY N I+EA +LF+ MP
Sbjct: 202 VVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPE 261
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
+DF SW TMITGF + K+ LF+ MPEK+ ++WT +I+G+V N++ EEA F +M
Sbjct: 262 RDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM 321
Query: 323 LRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
LR V+PN T S+LSA + A L +G QIH + K + + + ++L+++YSK G
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 382 VVDAYRIFTN--IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
++ A ++F N + +R+++S+NSMI+ +A +G G+EA+ ++ +M+ G P+ +T+L++L
Sbjct: 382 LIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLL 441
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
AC+H GLVE+G +FK + ++ EHY C+VD+ GRAG L + + IN
Sbjct: 442 FACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLS 501
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
+GA+L A H + +AK + ++E D A YV++S++Y+ GK+ + +RMK
Sbjct: 502 RSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMK 561
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K K ++K PGCSW+ + + HLF+ G KS + ++ L +
Sbjct: 562 MKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDL 605
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 221/467 (47%), Gaps = 73/467 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N MI + I +A E+F MP RN VS+ +M+ V+RG EA L
Sbjct: 135 MPERNVVSWNTMIDGYAQSG-RIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNL 193
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP RD V A++ G K G+ +EA R+F+ M E+++++W +M+ GY + R+ E
Sbjct: 194 FERMPR--RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDE 251
Query: 121 ARE-------------------------------IFDKMPEKNVVAWTAMVDGYMKVDCF 149
A + +FD+MPEKNV++WT M+ GY++
Sbjct: 252 ADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKEN 311
Query: 150 EDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
E+ ++F M R G + N T + AC EG Q+H L+S+ + I+ ++
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSA 371
Query: 209 IITMYGRLGFMDEANKVFS--MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF- 265
++ MY + G + A K+F ++ +RD +SWNS+I+ Y H+G +EA ++ +M F
Sbjct: 372 LLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFK 431
Query: 266 ---VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
V++ ++ S G +EK +E F + + + EE + +++
Sbjct: 432 PSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLR------------EEHYTCLVDL 479
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG-N 381
+ R +T + + A + G+ + A N+ ++VSI +V + G +
Sbjct: 480 CGRAGRLKDVT-NFINCDDARLSRSFYGAILSA----CNVHNEVSIAKEVVKKVLETGSD 534
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
Y + +NI +A NG EEA + KMK++GL
Sbjct: 535 DAGTYVLMSNI--------------YAANGKREEAAEMRMKMKEKGL 567
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 115/214 (53%), Gaps = 32/214 (14%)
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM-PEKDDVT 298
LI G+I EA +LF+ +P +D V+WT +ITG+ G++ ++ ELF+ + K+ VT
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA++SG++ ++Q A F EM ++V ++ ++++ A + +++ ++ +
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 359 KMNMES---------------------------DVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ N+ S DV ++V +K G V +A R+F
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ ERNI+S+N+MI+G+AQN +EA LF+ M +
Sbjct: 228 MPERNIISWNAMITGYAQNNRIDEADQLFQVMPE 261
>gi|297826975|ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327209|gb|EFH57629.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/580 (34%), Positives = 343/580 (59%), Gaps = 46/580 (7%)
Query: 16 LINNNCSI---YEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSV 72
LI C + EA ++F +P R+ V++ +ITG+++ G EA EL+ + +R ++ V
Sbjct: 52 LIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSR-KNVV 110
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
A++SGYL+ + A +F+ M E+++V+W +M+DGY + GR+ +A E+FD+MPE+N
Sbjct: 111 TWTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
V+W M+ ++ ++ +LF M
Sbjct: 171 TVSWNTMIKALVQRGRIDEAMNLFERMPIK------------------------------ 200
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
D+I +++ + G +DEA ++F M +R+ +SWN++I+GY +N I+E
Sbjct: 201 ---------DVISWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYTYNNRIDE 251
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A +LF+ MP +DF SW TMITGF + ++ LF+ MP+K+ ++WTA+I+G+V N++
Sbjct: 252 ADQLFQVMPERDFASWNTMITGFIRNREINRACGLFDRMPQKNVISWTAMITGYVENKEN 311
Query: 313 EEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
EEA + F +MLR V+PN T S+LSA + A L +G QIH + K + + + ++
Sbjct: 312 EEALKVFSKMLRDGCVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQENEVVTSA 371
Query: 372 LVSLYSKCGNVVDAYRIFTN--IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
L+++YSK G ++ A ++F N + +R+++S+NSMI+ +A +G G+EA+ ++ +M+ G
Sbjct: 372 LINMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYDQMRKHGFK 431
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
P+++T+L++L AC+H GLVE+G +FK + ++ EHY C+VD+ GRAG L + ++
Sbjct: 432 PSEVTYLNLLFACSHAGLVEKGMEFFKELVRDESLPLREEHYTCLVDLCGRAGRLKDVLN 491
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
IN +GA+L A H + +AK + ++E D A YV++S++Y+ GK
Sbjct: 492 FINCDDARLSRSFYGAILSACNVHSEVSIAKEVVKKVLETGSDDAGTYVMMSNIYAASGK 551
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ +RMK K K ++K PGCSW+ + ++ HLF+ G KS
Sbjct: 552 REKAAEMRMKMKEKGLKKQPGCSWVKIGNQTHLFVVGDKS 591
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 218/467 (46%), Gaps = 73/467 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N MI + I +A E+F MP RN VS+ MI V+RG EA L
Sbjct: 135 MPERNIVSWNTMIDGYAQSG-RIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNL 193
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP +D + A++ G K G+ +EA R+F+ M E+++++W +M+ GY R+ E
Sbjct: 194 FERMPI--KDVISWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYTYNNRIDE 251
Query: 121 A-------------------------REI------FDKMPEKNVVAWTAMVDGYMKVDCF 149
A REI FD+MP+KNV++WTAM+ GY++
Sbjct: 252 ADQLFQVMPERDFASWNTMITGFIRNREINRACGLFDRMPQKNVISWTAMITGYVENKEN 311
Query: 150 EDGFDLFLSMRRGGMAFNSI-TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
E+ +F M R G ++ T + AC EG Q+H L+S+ + ++ ++
Sbjct: 312 EEALKVFSKMLRDGCVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQENEVVTSA 371
Query: 209 IITMYGRLGFMDEANKVFS--MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF- 265
+I MY + G + A K+F ++ +RD +SWNS+I+ Y H+G +EA ++++M F
Sbjct: 372 LINMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYDQMRKHGFK 431
Query: 266 ---VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
V++ ++ S G +EK +E F + + + EE + +++
Sbjct: 432 PSEVTYLNLLFACSHAGLVEKGMEFFKELVRDESLPLR------------EEHYTCLVDL 479
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG-N 381
+ R L VL+ S A + N+ S+VSI +V + G +
Sbjct: 480 CGRAGR-----LKDVLNFINCDDARLSRSFYGAILSACNVHSEVSIAKEVVKKVLETGSD 534
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
Y + +NI +A +G E+A + KMK++GL
Sbjct: 535 DAGTYVMMSNI--------------YAASGKREKAAEMRMKMKEKGL 567
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 203/407 (49%), Gaps = 40/407 (9%)
Query: 8 SYNAMITA-LINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA 66
++ AM++ L + S+ E +F MP RN VS+ MI G+ + G +A EL+ MP
Sbjct: 111 TWTAMVSGYLRSKQLSVAET--LFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPE 168
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
R++V N +I ++ GR +EA +FE M KDV++W +MVDG K G+V EAR +FD
Sbjct: 169 --RNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFD 226
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
MPE+N+++W AM+ GY + ++ LF M A + +T F R RE
Sbjct: 227 CMPERNIISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMIT-------GFIRNRE 279
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN-------- 238
+ GL R ++I ++IT Y +EA KVFS M + V N
Sbjct: 280 INRACGLFDRMP-QKNVISWTAMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSIL 338
Query: 239 ---SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN--MMPE 293
S ++G V +I + + + + ++ V + +I +S G L + ++F+ ++ +
Sbjct: 339 SACSDLAGLVEGQQIHQL--ISKSVHQENEVVTSALINMYSKSGELIAARKMFDNGLVCQ 396
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+D ++W ++I+ + ++ +EA + +M + +P+++T ++L A + + +G +
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYDQMRKHGFKPSEVTYLNLLFACSHAGLVEKGMEF 456
Query: 354 HAHVVKMNMESDVSIQ------NSLVSLYSKCGNVVDAYRIFTNIDE 394
+V+ D S+ LV L + G + D F N D+
Sbjct: 457 FKELVR-----DESLPLREEHYTCLVDLCGRAGRLKDVLN-FINCDD 497
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 44/235 (18%)
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKS 284
++S SK LI G++ EA +LF+ +P +D V+WT +ITG+ GN+ ++
Sbjct: 37 IYSSSSKPRVPRPEWLIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREA 96
Query: 285 IELFNMM-PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
ELF+ + K+ VTWTA++SG++ ++Q A F EM P
Sbjct: 97 RELFDRVDSRKNVVTWTAMVSGYLRSKQLSVAETLFQEM------P-------------- 136
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
E ++ N+++ Y++ G + A +F + ERN VS+N+M
Sbjct: 137 -------------------ERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTM 177
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
I Q G +EA+NLF +M + + I++ +++ G V+E F M
Sbjct: 178 IKALVQRGRIDEAMNLFERMP----IKDVISWTAMVDGLAKNGKVDEARRLFDCM 228
>gi|357148182|ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/561 (38%), Positives = 326/561 (58%), Gaps = 42/561 (7%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAAR-IFEAMVEKDVV 103
IT R G A ++ MP R D V NAL++ + GR AAR +F+ M ++V+
Sbjct: 14 ITALARAGDVAAARRVFDAMPRR--DVVSWNALLTALWRAGRDLPAARRLFDDMPSRNVI 71
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
+W S+V G G + A F + P +NV +W AM+ G +++ +D + LF M +
Sbjct: 72 SWNSVVAGCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDAWALFGEMPQ-- 129
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
N ++ T + + R G V+R A
Sbjct: 130 --RNVVSYTTMVDGLAR----------RGEVAR-------------------------AR 152
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEK 283
+VF M +R+ VSW ++I+GYV N +EA +LFE MP K+ V+ T MITG+ G++E
Sbjct: 153 EVFDAMPERNLVSWAAMITGYVENAMFDEARKLFEAMPDKNVVACTAMITGYCKDGDVES 212
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ LF+ +P KD ++W A+I+G+V+N EEA + I M R+ V+P+ TL ++L+A +A
Sbjct: 213 ARRLFDGIPVKDVISWNAMITGYVHNGHGEEAMKLHIIMFREGVKPDHATLIAILTACSA 272
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
A L QG HA K +ES S N+L+++YSKCGNV ++ +F N+ ++IVS+N++
Sbjct: 273 LALLRQGRSTHAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNTI 332
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I+ +AQ+G ++A+ LF +M+ GL+PN IT LS+LSAC HVG V + F M + Y
Sbjct: 333 IAAYAQHGKYQKAIALFHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSSKYA 392
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
I P EHYAC+VDILGRAG L +A I M FE VWGALLGA +TH N+ L +LAA
Sbjct: 393 ISPSAEHYACVVDILGRAGQLEKACSYIKKMPFEAERNVWGALLGASKTHGNVQLGELAA 452
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ L++ + S+ PYV+LS++Y+ G + NRVR + K K ++K PG SW + +KV++F
Sbjct: 453 KMLVQSDSVSSGPYVMLSNIYAAAGMWGEVNRVRGQMKEKGVKKQPGYSWTEIANKVNMF 512
Query: 584 LAGRKSCLDLKEIEVTLQTIS 604
+ G S ++ +I L+ IS
Sbjct: 513 VGGDASHPEMNKIISELRKIS 533
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 168/302 (55%), Gaps = 7/302 (2%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
R AS+NAM+ L+ + +A+ +F MP RN VSY M+ G RRG A E++
Sbjct: 99 RNVASWNAMLAGLVRLG-RMDDAWALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDA 157
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
MP R + V A+I+GY++ +EA ++FEAM +K+VVA +M+ GYCK G V AR
Sbjct: 158 MPER--NLVSWAAMITGYVENAMFDEARKLFEAMPDKNVVACTAMITGYCKDGDVESARR 215
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD +P K+V++W AM+ GY+ E+ L + M R G+ + TL + AC
Sbjct: 216 LFDGIPVKDVISWNAMITGYVHNGHGEEAMKLHIIMFREGVKPDHATLIAILTACSALAL 275
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
R+G H + ++ + N+++TMY + G + E+ VF + +D VSWN++I+
Sbjct: 276 LRQGRSTHAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNTIIAA 335
Query: 244 YVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
Y +G+ ++A LF M + ++ +M++ G + S+ELF++M K ++
Sbjct: 336 YAQHGKYQKAIALFHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSSKYAISP 395
Query: 300 TA 301
+A
Sbjct: 396 SA 397
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 129/279 (46%), Gaps = 55/279 (19%)
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG-NLEKSIE 286
M++ R V N I+ G++ A R+F+ MP +D VSW ++T G +L +
Sbjct: 1 MLATRLLVRDNQRITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARR 60
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV------------------- 327
LF+ MP ++ ++W ++++G + + + A +F R++V
Sbjct: 61 LFDDMPSRNVISWNSVVAGCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDA 120
Query: 328 --------RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS-----IQNSLVS 374
+ N ++ ++++ A + + ++ + + N+ S + ++N++
Sbjct: 121 WALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMFD 180
Query: 375 LYSK------------CGNVVDAY----------RIFTNIDERNIVSYNSMISGFAQNGL 412
K C ++ Y R+F I ++++S+N+MI+G+ NG
Sbjct: 181 EARKLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIPVKDVISWNAMITGYVHNGH 240
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
GEEA+ L M EG+ P+ T +++L+AC+ + L+ +G
Sbjct: 241 GEEAMKLHIIMFREGVKPDHATLIAILTACSALALLRQG 279
>gi|297744558|emb|CBI37820.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/498 (39%), Positives = 315/498 (63%), Gaps = 12/498 (2%)
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
+EA ++F++M E++VV+W +MV G+ + G V A E F +MPE++ + +A+V G ++
Sbjct: 2 DEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNG 61
Query: 148 CFEDGFDLFLSMRRGGMAFNSI--TLTILFEACGRFFRYREGVQVHGLVSRFG------- 198
++ + L+ RR + IL G+ R + Q+ + +
Sbjct: 62 ELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGG 121
Query: 199 -FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
F+ +++ NS+I Y + + A +F M +RD +SWN++ISGYV ++EEA+ LF
Sbjct: 122 RFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLF 181
Query: 258 ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
+ MP D ++W +MI+GF+ KGNLE + LF +P+K+ V+W ++I+G+ NN Y+ A
Sbjct: 182 QEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATE 241
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
+ +ML + +P++ TLSSVLS + A L+ G QIH + K + D+ I NSL+++YS
Sbjct: 242 LYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVI-PDIPINNSLITMYS 300
Query: 378 KCGNVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+CG +V+A IF + ++ ++S+N+MI G+A +G +AL LF MK + P ITF+
Sbjct: 301 RCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFI 360
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
SVL+AC H G V+EG ++FKSM + IEP EH+A +VDI+GR G L EA+DLINSM F
Sbjct: 361 SVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPF 420
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
EP VWGALLGA R H N++LA++AA+ LM+LEP+S+ PYV+L ++Y+ +G+ + +
Sbjct: 421 EPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEM 480
Query: 557 RMKKKLKRIRKSPGCSWI 574
RM + IRK PG SW+
Sbjct: 481 RMMMERNNIRKQPGYSWV 498
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 165/350 (47%), Gaps = 58/350 (16%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPM------------RNAVSYAAMITGFVRRGMFY 55
+YN ++ N + +A ++F +P RN VS+ +MI +V+ +
Sbjct: 86 AYNILLAGY-GQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIF 144
Query: 56 EAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
A L+ M + RD++ N +ISGY+++ EEA +F+ M D + W SM+ G+ +K
Sbjct: 145 SARVLFDQM--KERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGFAQK 202
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + AR +F +P+KN+V+W +M+ GY ++ +L+ M G + TL+ +
Sbjct: 203 GNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVL 262
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDA 234
C F G+Q+H +++ DI + NS+ITMY R G + EA +F + +++
Sbjct: 263 SVCSGFAALHLGMQIHQQITKTVIP-DIPINNSLITMYSRCGAIVEARTIFDEVKLQKEV 321
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERM-------------------PGKDFVSWTTM---- 271
+SWN++I GY +G +A LFE M FV M
Sbjct: 322 ISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKS 381
Query: 272 ----------ITGFSS-------KGNLEKSIELFNMMP-EKDDVTWTAII 303
I F+S G LE++++L N MP E D W A++
Sbjct: 382 MACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALL 431
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/523 (23%), Positives = 225/523 (43%), Gaps = 135/523 (25%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+NAM+T + N + A E F MP R++ S +A++ G ++ G EA+ +
Sbjct: 11 MQERNVVSWNAMVTGFLQNG-DVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRI 69
Query: 61 YVNMPARWRDS------VCSNALISGYLKVGRCEEAARIFEAM------------VEKDV 102
+ +R +D N L++GY + GR ++A ++F+ + E++V
Sbjct: 70 LLT--SRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNV 127
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
V+W SM+ Y K + AR +FD+M E++ ++W M+ GY+++ E+ + LF M
Sbjct: 128 VSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMP-- 185
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
N TLT NS+I+ + + G ++ A
Sbjct: 186 ----NPDTLTW---------------------------------NSMISGFAQKGNLELA 208
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSW-------- 268
+F+ + +++ VSWNS+I+GY +NG+ + A L+ +M P + +S
Sbjct: 209 RALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGF 268
Query: 269 ------------------------TTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAII 303
++IT +S G + ++ +F+ + +K+ ++W A+I
Sbjct: 269 AALHLGMQIHQQITKTVIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMI 328
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
G+ + +A F M R VRP +T SVL+A A + +G H M E
Sbjct: 329 GGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEG---RMHFKSMACE 385
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ E I + S++ ++G EEA++L M
Sbjct: 386 FGI---------------------------EPRIEHFASLVDIVGRHGQLEEAMDLINSM 418
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
E P++ + ++L AC VE + + + L +EP
Sbjct: 419 PFE---PDKAVWGALLGACRVHNNVELARV---AAEALMKLEP 455
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 161/337 (47%), Gaps = 45/337 (13%)
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
MDEA ++F M +R+ VSWN++++G++ NG++E A F RMP +D S + ++ G
Sbjct: 1 MDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQN 60
Query: 279 GNLEKSIELFNMMPEKDD------VTWTAIISGFVNNEQYEEAFRWFIEML--------- 323
G L+++ + +DD + +++G+ N + ++A + F ++
Sbjct: 61 GELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDG 120
Query: 324 ----RKDVRPNQLTLSSVLSASAATA-----------TLNQGSQIHAHVVKMNMES---- 364
R V N + + V + +A T++ + I +V +ME
Sbjct: 121 GRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWML 180
Query: 365 -------DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
D NS++S +++ GN+ A +F I ++N+VS+NSMI+G+ NG + A
Sbjct: 181 FQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGAT 240
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVD 476
L+R+M +G P++ T SVLS C+ + G I+ + KT+ P ++
Sbjct: 241 ELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVI---PDIPINNSLIT 297
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+ R G++ EA + + + + W A++G H
Sbjct: 298 MYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFH 334
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/538 (38%), Positives = 313/538 (58%), Gaps = 40/538 (7%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK-GRVIEAREIFDKMPE 130
+ SN LI+ Y++ G + A R+FE M K V W S++ + KK G AR++F+K+P+
Sbjct: 42 IASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIPQ 101
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
N V++ M+ + D RG F+S+ L
Sbjct: 102 PNTVSYNIMLACHWHHLGVHDA--------RG--FFDSMPLK------------------ 133
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
D+ N++I+ ++G M EA ++FS M +++ VSW++++SGYV G++
Sbjct: 134 -----------DVASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDL 182
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+ A F P + ++WT MITG+ G +E + LF M + VTW A+I+G+V N
Sbjct: 183 DAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENG 242
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+ E+ R F ML V+PN L+L+SVL + + L G Q+H V K + SD +
Sbjct: 243 RAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGT 302
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SLVS+YSKCG++ DA+ +F I +++V +N+MISG+AQ+G G++AL LF +MK EGL P
Sbjct: 303 SLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKP 362
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+ ITF++VL ACNH GLV+ G YF +M+ + IE PEHYACMVD+LGRAG L+EA+DL
Sbjct: 363 DWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDL 422
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I SM F+P P ++G LLGA R H NL+LA+ AA++L+EL+P AT YV L+++Y+ +
Sbjct: 423 IKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRW 482
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+R K + K PG SWI + VH F + + +L I L+ + K K
Sbjct: 483 DHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMK 540
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 215/454 (47%), Gaps = 38/454 (8%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
+ SYN M+ A ++ +++A F +MP+++ S+ MI+ + G+ EA L+ MP
Sbjct: 104 TVSYNIML-ACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMP 162
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
+ + V +A++SGY+ G + A F A + V+ W +M+ GY K GRV A +F
Sbjct: 163 EK--NCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLF 220
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+M + +V W AM+ GY++ EDG LF +M G+ N+++LT + C +
Sbjct: 221 QEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQ 280
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G QVH LV + D G S+++MY + G + +A ++F + ++D V WN++ISGY
Sbjct: 281 LGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYA 340
Query: 246 HNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDD 296
+G ++A RLF+ M + D++++ ++ + G ++ ++ FN M E
Sbjct: 341 QHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKP 400
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+ ++ + EA M +P+ ++L A LN +
Sbjct: 401 EHYACMVDLLGRAGKLSEAVDLIKSM---PFKPHPAIYGTLLGACRIHKNLN----LAEF 453
Query: 357 VVKMNMESDVSIQNSLVSL---YSKCGNVVDAYRIFTNIDERNIVS--------YNSMIS 405
K +E D +I V L Y+ I ++ + N+V NS++
Sbjct: 454 AAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVH 513
Query: 406 GFAQN--------GLGEEALNLFRKMKDEGLVPN 431
GF + + E+ +L +KMK G VP+
Sbjct: 514 GFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPD 547
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 168/359 (46%), Gaps = 56/359 (15%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLK-VGRCEEAARIFE 95
N ++ +I +VR G A ++ +M + + +V N++++ + K G E A ++FE
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDM--KVKSTVTWNSILAAFAKKPGHFEYARQLFE 97
Query: 96 AMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
+ + + V++ M+ + V +AR FD MP K+V +W M+ +V + L
Sbjct: 98 KIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRL 157
Query: 156 FLSMRRGGMAFNSITLTIL---FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
F +M N ++ + + + ACG E + S +I ++IT
Sbjct: 158 FSAMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPMRS-------VITWTAMITG 206
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------P----- 261
Y + G ++ A ++F MS R V+WN++I+GYV NG E+ RLF M P
Sbjct: 207 YMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSL 266
Query: 262 ---------------GK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
GK D + T++++ +S G+L+ + ELF +P
Sbjct: 267 TSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPR 326
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
KD V W A+ISG+ + ++A R F EM ++ ++P+ +T +VL A ++ G Q
Sbjct: 327 KDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ 385
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 129/247 (52%), Gaps = 32/247 (12%)
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK-GNLEKSIELFNMM 291
+ ++ N LI+ YV G+I+ A R+FE M K V+W +++ F+ K G+ E + +LF +
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
P+ + V++ +++ ++ +A +F M KDV + ++++SA A + +
Sbjct: 100 PQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVA----SWNTMISALAQVGLMGEAR 155
Query: 352 QIHAHVVKMNMES--------------DVSIQ-------------NSLVSLYSKCGNVVD 384
++ + + + N S D +++ ++++ Y K G V
Sbjct: 156 RLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVEL 215
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A R+F + R +V++N+MI+G+ +NG E+ L LFR M + G+ PN ++ SVL C++
Sbjct: 216 AERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSN 275
Query: 445 VGLVEEG 451
+ ++ G
Sbjct: 276 LSALQLG 282
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/645 (36%), Positives = 344/645 (53%), Gaps = 66/645 (10%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGYLKVGRCEE 89
RNAVS+ +++ +V+ +A +++ M P + S NA R +
Sbjct: 72 RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGS-----RNID 126
Query: 90 AARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
A R AMV EKDV ++VD Y K GRV A IF+KMP+ +VV+W A++ G
Sbjct: 127 AGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISG-- 184
Query: 145 KVDCFEDGFD-----LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
C +G D L L M+ G+ N L+ + +AC + G Q+HG + +
Sbjct: 185 ---CVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA 241
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D D +G ++ MY + F+D+A KVF MS RD + WN+LISG H G +EA+ +F
Sbjct: 242 DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYG 301
Query: 260 MPGKDF-VSWTTMITGFSSKGNLE------------------------------------ 282
+ + V+ TT+ S +LE
Sbjct: 302 LRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSC 361
Query: 283 --KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+I +F D + T++I+ + E A + F+EMLRK + P+ LSS+L+A
Sbjct: 362 LSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNA 421
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A+ + QG Q+HAH++K SD N+LV Y+KCG++ DA F+++ ER +VS+
Sbjct: 422 CASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSW 481
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
++MI G AQ+G G+ AL LF +M DEG+ PN IT SVL ACNH GLV+E YF SMK
Sbjct: 482 SAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 541
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
++ I+ EHY+CM+D+LGRAG L +A++L+NSM F+ VWGALLGA R H + +L K
Sbjct: 542 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGK 601
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
LAA+ L LEP+ + +V+L++ Y+ G + +VR K I+K P SW+ +KDKV
Sbjct: 602 LAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKV 661
Query: 581 HLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLER 624
H F+ G KS KEI L + + + P D L L+R
Sbjct: 662 HTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDR 706
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 186/391 (47%), Gaps = 40/391 (10%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKM-PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM 159
DV ++V Y G + +AR +FD+ E+N V+W ++ Y+K D D +F M
Sbjct: 41 DVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM 100
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
G+ + + AC G QVH +V R G++ D+ N+++ MY ++G +
Sbjct: 101 VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 160
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMIT------ 273
D A+ +F M D VSWN+LISG V NG A L +M V M++
Sbjct: 161 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 220
Query: 274 -------------GFSSKGN--------------------LEKSIELFNMMPEKDDVTWT 300
GF K N L+ ++++F+ M +D + W
Sbjct: 221 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWN 280
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+ISG + +++EAF F + ++ + N+ TL++VL ++A+ + Q+HA K+
Sbjct: 281 ALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKI 340
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
D + N L+ Y KC + DA R+F +I++ SMI+ +Q GE A+ LF
Sbjct: 341 GFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLF 400
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+M +GL P+ S+L+AC + E+G
Sbjct: 401 MEMLRKGLEPDPFVLSSLLNACASLSAYEQG 431
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 156/323 (48%), Gaps = 43/323 (13%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
MR G+ N L ++ + + G QVH + GF D+ + N+++ MYG GF
Sbjct: 1 MRAEGVCCNEFALPVVLKCVPD---AQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 219 MDEANKVFSMM-SKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG--------- 262
MD+A +VF S+R+AVSWN L+S YV N + +A ++F M P
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 263 ------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
KD + ++ + G ++ + +F MP+ D V+
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISG V N A ++M + PN LSS+L A A + G QIH ++
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 237
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K N +SD I LV +Y+K + DA ++F + R+++ +N++ISG + G +EA +
Sbjct: 238 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFS 297
Query: 419 LFRKMKDEGLVPNQITFLSVLSA 441
+F ++ EGL N+ T +VL +
Sbjct: 298 IFYGLRKEGLGVNRTTLAAVLKS 320
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 171/411 (41%), Gaps = 48/411 (11%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-------WRDSVCSNALISGY 81
IF MP + VS+ A+I+G V G + A EL + M + S+ +G
Sbjct: 166 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGA 225
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+GR I D + G +VD Y K + +A ++FD M ++++ W A++
Sbjct: 226 FDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 284
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G ++ F +F +R+ G+ N TL + ++ QVH L + GF +
Sbjct: 285 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 344
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D + N +I Y + + +A +VF S D ++ S+I+ E A +LF M
Sbjct: 345 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 404
Query: 262 GK---------------------------------------DFVSWTTMITGFSSKGNLE 282
K D + ++ ++ G++E
Sbjct: 405 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 464
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+ F+ +PE+ V+W+A+I G + + A F M+ + + PN +T++SVL A
Sbjct: 465 DAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACN 524
Query: 343 ATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
+++ + + +M ++ + ++ L + G + DA + ++
Sbjct: 525 HAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 575
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALIS 79
SI +A F+++P R VS++AMI G + G A EL+ M + + +++
Sbjct: 462 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 521
Query: 80 GYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNV 133
G +EA R F +M +++ + M+D + G++ +A E+ + MP + N
Sbjct: 522 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 581
Query: 134 VAWTAMV 140
W A++
Sbjct: 582 SVWGALL 588
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/640 (33%), Positives = 346/640 (54%), Gaps = 56/640 (8%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRC-------EE 89
NAV + I G+V+ G + +A LY M R + + L+ +L V + +
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQM---QRTGINPDKLV--FLSVIKACGSQSDLQA 138
Query: 90 AARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
++ E ++ E DV+ ++ Y K G + AR++FD+MP+++VV+W A++ GY +
Sbjct: 139 GRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQ 198
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
+ LF M+ G+ NS TL + C +G Q+H R G + D+++
Sbjct: 199 NGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLV 258
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
N ++ MY + G ++ A+K+F M RD SWN++I GY N + EA F RM +
Sbjct: 259 VNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGI 318
Query: 266 -VSWTTMIT------------------------GFSSK--------------GNLEKSIE 286
+ TM++ GF S GN+ + +
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYK 378
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
LF MP+K+ V W AIISG+ + EA FIEM + ++P+ + SVL A A
Sbjct: 379 LFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLA 438
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L QG QIH + ++ ES+V + LV +Y+KCGNV A ++F + E+++VS+ +MI
Sbjct: 439 LEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILA 498
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+ +G GE+AL LF KM++ G + I F ++L+AC+H GLV++G YF+ MK+ Y + P
Sbjct: 499 YGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAP 558
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL 526
EHYAC+VD+LGRAG L EA +I +M+ EP VWGALLGA R H N++L + AA+HL
Sbjct: 559 KLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHL 618
Query: 527 MELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
EL+PD+A YV+LS++Y+ + D ++R K K ++K PGCS + + V FL G
Sbjct: 619 FELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVG 678
Query: 587 RKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
++ ++I L+ + + ++ + P + +L +E +
Sbjct: 679 DRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEE 718
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 198/424 (46%), Gaps = 60/424 (14%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA----EELYVNMPARWRDSVCSNAL 77
S+ A ++F MP R+ VS+ A+I G+ + G YEA E+ VN ++ S
Sbjct: 170 SLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMP 229
Query: 78 ISGYLKVGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+ +L E+ +I + +E DV+ +V+ Y K G V A ++F++MP ++V
Sbjct: 230 VCAHLLA--LEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDV 287
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+W A++ GY + F M+ G+ NSIT+ + AC F +G Q+HG
Sbjct: 288 ASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGY 347
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
R GF+ + ++GN+++ MY + G ++ A K+F M K++ V+WN++ISGY +G EA
Sbjct: 348 AIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEA 407
Query: 254 YRLFERMPGKDF-------------------------VSWTTMITGFSSK---------- 278
LF M + + T+ +GF S
Sbjct: 408 LALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDI 467
Query: 279 ----GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
GN+ + +LF MPE+D V+WT +I + + E+A F +M + + +
Sbjct: 468 YAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAF 527
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ------NSLVSLYSKCGNVVDAYRI 388
+++L+A + ++QG Q M+SD + LV L + G++ +A I
Sbjct: 528 TAILTACSHAGLVDQGLQYF-----QCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGI 582
Query: 389 FTNI 392
N+
Sbjct: 583 IKNM 586
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 178/378 (47%), Gaps = 59/378 (15%)
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK--------------------- 263
+ +AV W I GYV NG +A RL+ +M P K
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 264 ------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
D + T + + ++ G+LE + ++F+ MP++D V+W AII+G+ N Q
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
EA F EM ++PN TL SV+ A L QG QIH + ++ +ESDV + N
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNG 261
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
LV++Y+KCGNV A+++F + R++ S+N++I G++ N EAL F +M+ G+ PN
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPN 321
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY----ACMVDILGRAGSLAEA 487
IT +SVL AC H+ +E+G Y I G E +V++ + G++ A
Sbjct: 322 SITMVSVLPACAHLFALEQG-----QQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSA 376
Query: 488 IDLINSMTFEPPPGV--WGALLG--AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
L M P V W A++ + H + LA ++PDS VL
Sbjct: 377 YKLFERM---PKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPAC 433
Query: 544 YSVI----GKKRDGNRVR 557
+ GK+ G +R
Sbjct: 434 AHFLALEQGKQIHGYTIR 451
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 137/286 (47%), Gaps = 15/286 (5%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALIS 79
++ A+++F MP +N V++ A+I+G+ + G +EA L++ M A+ DS +++
Sbjct: 372 NVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLP 431
Query: 80 GYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
E+ +I + E +VV +VD Y K G V A+++F++MPE++VV+
Sbjct: 432 ACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVS 491
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ-VHGLV 194
WT M+ Y ED LF M+ G + I T + AC +G+Q +
Sbjct: 492 WTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMK 551
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIE-- 251
S +G + ++ + GR G +DEAN + MS + DA W +L+ + IE
Sbjct: 552 SDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELG 611
Query: 252 --EAYRLFERMPGKDFVSWTTMITG-FSSKGNLEKSIELFNMMPEK 294
A LFE P D + +++ ++ E +L MM EK
Sbjct: 612 EQAAKHLFELDP--DNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEK 655
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/624 (35%), Positives = 332/624 (53%), Gaps = 46/624 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARW 68
NA+I AL S+ A +F+ MP + V++ +I+ + G A E++ M + W
Sbjct: 182 NALI-ALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGW 240
Query: 69 R-DSVCSNALISGYLKVGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
D V +L++ +G + ++ +A + D + GS++D Y K G ++EA E
Sbjct: 241 TPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALE 300
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
IF NVV W M+ Y ++ FDLF M G+ N T L C
Sbjct: 301 IFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGE 360
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G Q+H L + GF+ D+ + +I MY + G++D+A ++ ++ +D VSW S+I+G
Sbjct: 361 INLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAG 420
Query: 244 YVHNGEIEEAYRLFERMP---------------------------------------GKD 264
YV + +EA F+ M D
Sbjct: 421 YVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSAD 480
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
W ++ ++ G +++ LF + KD +TW ++SGF + YEEA FI+M +
Sbjct: 481 VSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQ 540
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
V+ N T S +SASA A + QG QIHA V+K S+ + N+L+SLY KCG++ D
Sbjct: 541 AGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIED 600
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A F + ERN VS+N++I+ +Q+G G EAL+LF +MK EGL PN +TF+ VL+AC+H
Sbjct: 601 AKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSH 660
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
VGLVEEG YFKSM + + I P P+HYAC+VDILGRAG L A + M VW
Sbjct: 661 VGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWR 720
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LL A R H N+++ +LAA++L+ELEP + YV+LS+ Y+V GK + VR K +
Sbjct: 721 TLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRG 780
Query: 565 IRKSPGCSWIILKDKVHLFLAGRK 588
+RK PG SWI +K+ VH F G +
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDR 804
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 255/518 (49%), Gaps = 62/518 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+ A +F + R+ VS+ AM++G+ R G+ EA LY M CS + + Y+
Sbjct: 93 VQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMH-------CSGVVPTPYV 145
Query: 83 ---KVGRCEEAA-----RIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
+ C +AA R+ A V K + V +++ Y + G + A +F +MP
Sbjct: 146 LSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMP 205
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ V + ++ + + E ++F MR G + +T+ L AC +G Q
Sbjct: 206 YCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQ 265
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + + G D I+ S++ +Y + G + EA ++F + + V WN ++ Y +
Sbjct: 266 LHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISD 325
Query: 250 IEEAYRLFERM------PGK-------------------DFVSWTTMITGFSSK------ 278
+ +++ LF +M P + + + ++ TGF S
Sbjct: 326 LAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGV 385
Query: 279 --------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
G L+K+ + ++ KD V+WT++I+G+V +E +EA F +M + P+
Sbjct: 386 LIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPD 445
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ L+S +SA A + QG QIH+ V +DVSI N+LV+LY++CG +A+ +F
Sbjct: 446 NIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFE 505
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
I+ ++ +++N M+SGFAQ+GL EEAL +F KM G+ N TF+S +SA ++ +++
Sbjct: 506 AIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQ 565
Query: 451 G-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
G I+ +KT E E ++ + G+ GS+ +A
Sbjct: 566 GKQIHATVIKTGCTSE--TEVANALISLYGKCGSIEDA 601
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 211/444 (47%), Gaps = 42/444 (9%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A+ + +D +A ++D Y KKG V AR +F+++ ++ V+W AM+ GY + E
Sbjct: 66 AKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGE 125
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ L+ M G+ L+ + AC + + +G VH V + G + ++GN++I
Sbjct: 126 EAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALI 185
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE--RMPG--KDFV 266
+Y R G + A +VFS M D V++N+LIS + G E A +FE R+ G D V
Sbjct: 186 ALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCV 245
Query: 267 SWTTMITGFSSKGNLEK-----------------------------------SIELFNMM 291
+ +++ +S G+L K ++E+F
Sbjct: 246 TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSG 305
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ V W ++ + ++F F +M+ VRPN+ T +L +N G
Sbjct: 306 DRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGE 365
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
QIH +K ESD+ + L+ +YSK G + A RI ++ +++VS+ SMI+G+ Q+
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHE 425
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEH 470
+EAL F+ M+ G+ P+ I S +SAC + + +G I+ + + Y+ +
Sbjct: 426 FCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSI-- 483
Query: 471 YACMVDILGRAGSLAEAIDLINSM 494
+ +V++ R G EA L ++
Sbjct: 484 WNALVNLYARCGRSKEAFSLFEAI 507
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 166/374 (44%), Gaps = 41/374 (10%)
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
M + + + G++ + E LF + R S+ C ++
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60
Query: 188 VQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
V V H G D I GN +I +Y + G + A +VF +S RD VSW +++SGY
Sbjct: 61 VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYAR 120
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSK---------------------------- 278
NG EEA L+ +M V +++ S
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVV 180
Query: 279 -----------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
G+L + +F+ MP D VT+ +IS E A F EM
Sbjct: 181 GNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGW 240
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ +T++S+L+A A+ LN+G Q+H++++K M D I+ SL+ LY KCG +V+A
Sbjct: 241 TPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALE 300
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
IF + D N+V +N M+ + Q ++ +LF +M G+ PN+ T+ +L C + G
Sbjct: 301 IFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGE 360
Query: 448 VEEG-FIYFKSMKT 460
+ G I+ S+KT
Sbjct: 361 INLGEQIHLLSIKT 374
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/645 (36%), Positives = 344/645 (53%), Gaps = 66/645 (10%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGYLKVGRCEE 89
RNAVS+ +++ +V+ +A +++ M P + S NA R +
Sbjct: 165 RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGS-----RNID 219
Query: 90 AARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
A R AMV EKDV ++VD Y K GRV A IF+KMP+ +VV+W A++ G
Sbjct: 220 AGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISG-- 277
Query: 145 KVDCFEDGFD-----LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
C +G D L L M+ G+ N L+ + +AC + G Q+HG + +
Sbjct: 278 ---CVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA 334
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D D +G ++ MY + F+D+A KVF MS RD + WN+LISG H G +EA+ +F
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYG 394
Query: 260 MPGKDF-VSWTTMITGFSSKGNLEKS---------------------------------- 284
+ + V+ TT+ S +LE +
Sbjct: 395 LRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSC 454
Query: 285 ----IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
I +F D + T++I+ + E A + F+EMLRK + P+ LSS+L+A
Sbjct: 455 LSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNA 514
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A+ + QG Q+HAH++K SD N+LV Y+KCG++ DA F+++ ER +VS+
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSW 574
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
++MI G AQ+G G+ AL LF +M DEG+ PN IT SVL ACNH GLV+E YF SMK
Sbjct: 575 SAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
++ I+ EHY+CM+D+LGRAG L +A++L+NSM F+ VWGALLGA R H + +L K
Sbjct: 635 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGK 694
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
LAA+ L LEP+ + +V+L++ Y+ G + +VR K I+K P SW+ +KDKV
Sbjct: 695 LAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKV 754
Query: 581 HLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLER 624
H F+ G KS KEI L + + + P D L L+R
Sbjct: 755 HTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDR 799
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 219/474 (46%), Gaps = 53/474 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F +P VS+++++T + G+ A + + M A + VC N V
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRA---EGVCCNEF--ALPVVL 110
Query: 86 RCEEAARI---FEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKM-PEKNVVAW 136
+C A++ AM DV ++V Y G + +AR +FD+ E+N V+W
Sbjct: 111 KCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSW 170
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
++ Y+K D D +F M G+ + + AC G QVH +V R
Sbjct: 171 NGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVR 230
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
G++ D+ N+++ MY ++G +D A+ +F M D VSWN+LISG V NG A L
Sbjct: 231 MGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 290
Query: 257 FERMPGKDFVSWTTMIT-------------------GFSSKGN----------------- 280
+M V M++ GF K N
Sbjct: 291 LLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 281 ---LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
L+ ++++F+ M +D + W A+ISG + +++EAF F + ++ + N+ TL++V
Sbjct: 351 NHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 410
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L ++A+ + Q+HA K+ D + N L+ Y KC + DA R+F +I
Sbjct: 411 LKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDI 470
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++ SMI+ +Q GE A+ LF +M +GL P+ S+L+AC + E+G
Sbjct: 471 IAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 524
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 140/302 (46%), Gaps = 39/302 (12%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H + + GF L N +I+ Y + A +VF + VSW+SL++ Y +
Sbjct: 23 GAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 247 NGEIEEAYRLFERMPGKDF----------------------VSWTTMITGFSSK------ 278
NG A + F M + V M TGF S
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANA 140
Query: 279 --------GNLEKSIELFNMM-PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
G ++ + +F+ E++ V+W ++S +V N+Q +A + F EM+ ++P
Sbjct: 141 LVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 200
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ S V++A + ++ G Q+HA VV+M E DV N+LV +Y K G V A IF
Sbjct: 201 TEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIF 260
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ + ++VS+N++ISG NG A+ L +MK GLVPN S+L AC G +
Sbjct: 261 EKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFD 320
Query: 450 EG 451
G
Sbjct: 321 LG 322
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T+S L+ AA L G+ +HA+++K + S++N L+S YSKC A R+F I
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGFLA--SLRNHLISFYSKCRRPCCARRVFDEI 63
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ VS++S+++ ++ NGL A+ F M+ EG+ N+ VL
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL 110
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALIS 79
SI +A F+++P R VS++AMI G + G A EL+ M + + +++
Sbjct: 555 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 614
Query: 80 GYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNV 133
G +EA R F +M +++ + M+D + G++ +A E+ + MP + N
Sbjct: 615 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 674
Query: 134 VAWTAMV 140
W A++
Sbjct: 675 SVWGALL 681
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/576 (35%), Positives = 332/576 (57%), Gaps = 44/576 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
+ ++F+T ++ ++ I R G A +++ MP RD+V N++I+GY K G
Sbjct: 38 SIKLFST---QDVYAFNVQIGNLARAGNIGAARQVFDEMP--HRDTVSWNSIITGYWKNG 92
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
+E+ R+F M K+VV+W SM+ G + R+ EA + F MP++N +W AM+ G ++
Sbjct: 93 CFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVR 152
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
D E+ LF M R ++I
Sbjct: 153 YDRVEEASRLFEEMPR---------------------------------------RNVIS 173
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
+++ Y ++G +++A +F+ M +++ VSW +ISGYV NG+ +EA LFE+MP K+
Sbjct: 174 YTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI 233
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
V+ T MITG+ +G +K+ LF+ +P +D +W A+I+G+ N EEA + +ML+
Sbjct: 234 VAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKM 293
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++P+ TL SVL+A ++ A+L +G + H V+K ES +SI N+L+++Y KCG+++D+
Sbjct: 294 GMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDS 353
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
F ID ++VS+N+MI+ FA++G + AL F +M+ + P+ ITFLS+LSAC H
Sbjct: 354 ELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHA 413
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
G V E +F SM Y I PEH+AC+VDIL R G + +A +I M FE G+WGA
Sbjct: 414 GKVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGA 473
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LL A HLN+ L +LAA+ ++ELEP ++ YVVLS++Y+ G + RVR + + +
Sbjct: 474 LLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGV 533
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
+K P SW+ + +KVH FL S ++ I + L+
Sbjct: 534 KKQPAYSWMEIDNKVHFFLGDDASHPEIHRIRLELK 569
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 38/326 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + S+N+MI I + I EA++ F MP RN S+ AMI+G VR EA L
Sbjct: 104 MPTKNVVSWNSMIAGCIEDE-RIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRL 162
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ + A++ GY K+G E+A +F M +K+VV+W M+ GY + G+ E
Sbjct: 163 FEEMPR--RNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDE 220
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMK-------------VDCF------------------ 149
A +F++MP+KN+VA TAM+ GY K + C
Sbjct: 221 AENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSG 280
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
E+ L M + GM + TL + AC +EG + H LV + G++ I + N++
Sbjct: 281 EEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNAL 340
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DF 265
ITMY + G + ++ F + D VSWN++I+ + +G + A F M D
Sbjct: 341 ITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDG 400
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMM 291
+++ ++++ G + +S+ FN M
Sbjct: 401 ITFLSLLSACGHAGKVHESLNWFNSM 426
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 190/404 (47%), Gaps = 42/404 (10%)
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
SI TI F R Q H L + D+ N I R G + A +VF
Sbjct: 17 SIIRTIFLPIFHSFNR-----QFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQVFD 71
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
M RD VSWNS+I+GY NG +E+ RLF MP K+ VSW +MI G ++++ +
Sbjct: 72 EMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQY 131
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F MP+++ +W A+ISG V ++ EEA R F EM R++V ++ ++++ A +
Sbjct: 132 FQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNV----ISYTAMVDGYAKIGEI 187
Query: 348 NQGSQIHAHVVKMNM---------------------------ESDVSIQNSLVSLYSKCG 380
Q + + + N+ + ++ ++++ Y K G
Sbjct: 188 EQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEG 247
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
A +F I R++ S+N+MI+G+AQNG GEEAL L +M G+ P+ T +SVL+
Sbjct: 248 KTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLT 307
Query: 441 ACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
AC+ + ++EG + +K+ Y E ++ + + GS+ ++ +L P
Sbjct: 308 ACSSLASLQEGRKTHVLVLKSGY--ESRISICNALITMYCKCGSILDS-ELAFRQIDHPD 364
Query: 500 PGVWGALLGAGRTHLNLD--LAKLAAQHLMELEPDSATPYVVLS 541
W A++ A H D LA +EPD T +LS
Sbjct: 365 VVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLS 408
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/629 (34%), Positives = 355/629 (56%), Gaps = 25/629 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRR---GMFYEAEEL 60
R+ ++N+ + AL + A FA+MP+R+AVS+ ++ + R A L
Sbjct: 59 RSVVTWNSFLAALARGR-DVAAARAFFASMPVRDAVSWNTLLAAYSRSLNSEHLAAARRL 117
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R D+V N L+ Y++ G EA ++F+ M +++V +W +MV G+ G+V +
Sbjct: 118 FDEMPQR--DAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVTGFFSAGQVNK 175
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS-MRRGGMAFNSITLTILFEACG 179
A ++FD MP K+ + +V G++K + +L +R M L A G
Sbjct: 176 ALDMFDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAVDAYNTLIAAYG 235
Query: 180 RFFRYREGVQVHGLVSRFG----------FDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
+ R + ++ ++ R F +++ NS++T Y R G + A ++F+ M
Sbjct: 236 QVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVCSAREIFNEM 295
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
+D VSWN++I+GY ++EEA +LF MP D VSW +I GF+ KG++E + F+
Sbjct: 296 PDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDIVSWNLIIRGFTQKGDVEHARGFFD 355
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
MPE+ ++W +ISG+ N Y+ A F +ML P++ T SSVL+A A+ L
Sbjct: 356 RMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLAACASLPMLRL 415
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G+Q+H +++ + D + N+L+++YS+ G + DA IF + ++++VS+N++I G+
Sbjct: 416 GAQLH-QLIEKSFLPDTATSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALIGGYEH 474
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+G EAL LF M+ ++P ITF+S+LSAC + GLV EG++ F +M Y+I E
Sbjct: 475 HGCATEALQLFEDMRSARVMPTHITFISLLSACGNAGLVSEGWMVFDTMIHEYSIAARIE 534
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
HYA +V+++GR G L +A+++INSM P VWGA LGA N LA +AA+ L ++
Sbjct: 535 HYAALVNLIGRHGQLDDALEVINSMPIAPDRSVWGAFLGACTAKKNELLAHMAAKALSKI 594
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+P+S+ PYV++ +L++ G+ + VR + + + I K PG SWI L DKVH+F++G S
Sbjct: 595 DPESSAPYVLIHNLHAHEGRWGSASVVREEMEQQGIHKHPGYSWIDLHDKVHVFISGDTS 654
Query: 590 CLDLKEIEVTLQTISKGTKEFDWPKHDWS 618
+EI L K FD DWS
Sbjct: 655 HPLTQEIFSVL-------KCFDMSSRDWS 676
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 200/472 (42%), Gaps = 101/472 (21%)
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
F+A+ + VV W S + + V AR F MP ++ V+W ++ Y +
Sbjct: 53 FDALPARSVVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSR-------- 104
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
+ NS L A R F D + N+++ Y
Sbjct: 105 -----------SLNSEHLA----AARRLFDEMP-------------QRDAVTWNTLLGAY 136
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMIT 273
R G M EA K+F M +R+ SWN++++G+ G++ +A +F+ MP KD S T+++
Sbjct: 137 VRRGLMVEAEKLFDEMPQRNVASWNTMVTGFFSAGQVNKALDMFDAMPVKDSASLGTLVS 196
Query: 274 GFSSKGNLEKSIE------------------------------------LFNMMPE---- 293
GF G L ++ E LF+M+P
Sbjct: 197 GFIKNGRLHEAEELLTKRLRVTDMDEAVDAYNTLIAAYGQVGRVSDARRLFDMIPRGQYQ 256
Query: 294 ----------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
++ V+W ++++ ++ A F EM KD+ ++ +++++
Sbjct: 257 CKTNNMRVFARNVVSWNSMMTCYIRTGDVCSAREIFNEMPDKDL----VSWNTMIAGYTK 312
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+ + + ++ + + D+ N ++ +++ G+V A F + ER +S+N+M
Sbjct: 313 VSDMEEAEKLFWEMP----DPDIVSWNLIIRGFTQKGDVEHARGFFDRMPERGTISWNTM 368
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
ISG+ QNG + A+ LF KM + G P++ TF SVL+AC + ++ G + ++ +
Sbjct: 369 ISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLAACASLPMLRLGAQLHQLIEKSF- 427
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTH 513
P ++ + R G+L +A + M P + W AL+G H
Sbjct: 428 -LPDTATSNALMTMYSRGGALTDAEAIFKQM---PQKDLVSWNALIGGYEHH 475
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 164/410 (40%), Gaps = 88/410 (21%)
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN---LE 282
F + R V+WNS ++ ++ A F MP +D VSW T++ +S N L
Sbjct: 53 FDALPARSVVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSRSLNSEHLA 112
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA-- 340
+ LF+ MP++D VTW ++ +V EA + F EM +++V ++ SA
Sbjct: 113 AARRLFDEMPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVTGFFSAGQ 172
Query: 341 ---------------SAATATLNQG----SQIH-------AHVVKMNMESDVSIQNSLVS 374
SA+ TL G ++H + +M+ V N+L++
Sbjct: 173 VNKALDMFDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAVDAYNTLIA 232
Query: 375 LYSKCGNVVDAYRIFTNIDE--------------RNIVSYNSMISGFAQNGLGEEALNLF 420
Y + G V DA R+F I RN+VS+NSM++ + + G A +F
Sbjct: 233 AYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVCSAREIF 292
Query: 421 RKMKDEGLV---------------------------PNQITFLSVLSACNHVGLVEEGFI 453
+M D+ LV P+ +++ ++ G VE
Sbjct: 293 NEMPDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDIVSWNLIIRGFTQKGDVEHARG 352
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT---FEPPPGVWGALLGAG 510
+F M E G + M+ + G AI+L M P + ++L A
Sbjct: 353 FFDRMP-----ERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLAAC 407
Query: 511 RTHLNLDLAKLAAQHLMELE----PDSATPYVVLSDLYSVIGKKRDGNRV 556
+ L + +L AQ +E PD+AT +++ +YS G D +
Sbjct: 408 AS---LPMLRLGAQLHQLIEKSFLPDTATSNALMT-MYSRGGALTDAEAI 453
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/584 (34%), Positives = 334/584 (57%), Gaps = 41/584 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+ +A +F MP R+ VS+ AM+ + RRGM EA L+ AR R+ V AL+SGY
Sbjct: 57 VSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDAR-RNVVTWTALLSGYA 115
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ R +EA +FE M E++VV+W +M++ Y GRV +A +F++MP ++ +W ++ G
Sbjct: 116 RARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCG 175
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
++ E +F E + V D
Sbjct: 176 LVRSGSLERARKMF-----------------------------ERMPVR----------D 196
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
++ ++I+ R G +D+A +F M +R+ VSWN++ISGY N IEEA LF +MP
Sbjct: 197 VMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNAMISGYARNHRIEEALDLFTKMPI 256
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
+D SW MITGF +L+ + +LF+ MP+++ +TWT +++G++ Q E A + F M
Sbjct: 257 RDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCM 316
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L + ++PNQ+T L A + A L +G Q+H + K + D ++++L++LY+KCG +
Sbjct: 317 LVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEI 376
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A +F E++++S+N +I+ +A +G G EA++L++ M++ G PN T++ +LSAC
Sbjct: 377 RLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSAC 436
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG- 501
+H GLV+EG F+SM +I EHY C+VD+ RAG L +A LI+ +P
Sbjct: 437 SHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSST 496
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VW ALLG +H N + LAA+HL+E EPD+A Y +L ++Y+ GK ++ +R +
Sbjct: 497 VWSALLGGCNSHGNESIGDLAAKHLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMN 556
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
++ ++K PGCSWI + +KVH+F++ KS + I LQ I +
Sbjct: 557 VRGLKKQPGCSWIEVANKVHVFVSRDKSHSESDLINDLLQDIHR 600
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 206/410 (50%), Gaps = 23/410 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N ++ L+ + S+ A ++F MP+R+ +S+ MI+G R G +A L
Sbjct: 161 MPVRDAGSWNILLCGLVRSG-SLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVL 219
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ V NA+ISGY + R EEA +F M +DV +W M+ G+ + +
Sbjct: 220 FDAMPE--RNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKS 277
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD+MP++NV+ WT M++GY++ E LF M G+ N +T +AC
Sbjct: 278 ARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSN 337
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
EG QVH ++ + +D + ++++ +Y + G + A VF ++D +SWN +
Sbjct: 338 LAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGI 397
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I+ Y H+G EA L++ M + ++ +++ S G +++ +++F M + +
Sbjct: 398 IAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNS 457
Query: 297 VT-----WTAIISGFVNNEQYEEAFR---WFIEMLRKDVRPNQLTL-SSVLSASAATATL 347
+ +T ++ + E+A R WF ++P T+ S++L +
Sbjct: 458 IVVRDEHYTCLVDLCSRAGRLEDAKRLISWF------KIKPTSSTVWSALLGGCNSHGNE 511
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+ G H+++ + + L ++Y+ G +A I + ++ R +
Sbjct: 512 SIGDLAAKHLLEAEPD-NAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGL 560
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
V N V+ + G V DA R+F + +R++VS+ +M++ +A+ G+ +EA LF +
Sbjct: 41 VQDSNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDA 100
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
N +T+ ++LS V+E F+ M E + M++ G +
Sbjct: 101 R---RNVVTWTALLSGYARARRVDEAEALFEGMA-----ERNVVSWNTMLEAYTAVGRVE 152
Query: 486 EAIDLINSMTFEPPPGVWGALL 507
+A L N M G W LL
Sbjct: 153 DASALFNRMPVR-DAGSWNILL 173
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/595 (35%), Positives = 333/595 (55%), Gaps = 76/595 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A F MP+R SY A++ G+ R + A ++ MP R D NALISG L +
Sbjct: 36 ARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPTR--DLASYNALISG-LSLR 92
Query: 86 R---CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
R + AA + VV++ S++ GY + G + +A ++F +MPE+N +++T ++ G
Sbjct: 93 RHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQMPERNHISYTVLLGG 152
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
++ ++ LF M D
Sbjct: 153 FLDAGRVDEARKLFDEMPAK---------------------------------------D 173
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
++ ++++ Y ++G +DEA +F M KR+ VSW +++SGY NG++ A +LFE MP
Sbjct: 174 VVAWTAMLSGYCQVGRVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPE 233
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMP------------------------------ 292
++ VSWT M+ G+ G +E + ELFN MP
Sbjct: 234 RNEVSWTAMLFGYIQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRM 293
Query: 293 -EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
E+DD TW+AII + NE EA F EML +RPN ++ S+L+ AA A L+ G
Sbjct: 294 CERDDGTWSAIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGR 353
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
++H +++ + + D+ ++L+++Y KCGN+ A R+F + +++V +NSMI+G+AQ+G
Sbjct: 354 EVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHG 413
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
LGEEAL++F M+ G+VP+ IT++ L+AC++ G V+EG F SM+T I+PG EHY
Sbjct: 414 LGEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHY 473
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEP 531
ACMVD+LGRAG + EA+ LI +M EP +WGAL+GA R H N ++A+++A+ L+ELEP
Sbjct: 474 ACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLLELEP 533
Query: 532 DSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+A PYV+LS +Y+ G+ D + +R + + KS GCSWI +VHLF +G
Sbjct: 534 GNAGPYVLLSHIYTSSGRWEDASNMRKFISSRHLNKSLGCSWIEYDKRVHLFKSG 588
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 231/509 (45%), Gaps = 90/509 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPM-RNAVSYAAMITGFVRRGMFYEAEE 59
M R ASYNA+I+ L ++ +A AT+P + VS+ +++ G+VR G+ +A +
Sbjct: 74 MPTRDLASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQ 133
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
L+ MP R+ + L+ G+L GR +EA ++F+ M KDVVAW +M+ GYC+ GRV
Sbjct: 134 LFRQMPE--RNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVD 191
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EAR +FD+MP++NVV+WTAMV GY + LF M N ++ T +
Sbjct: 192 EARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPER----NEVSWTAM----- 242
Query: 180 RFFRYREGVQVHGLVSRFGF--DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
F Y + ++ F D+ + N +I +G+ G +D A VF M +RD +W
Sbjct: 243 -LFGYIQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTW 301
Query: 238 NSLISGYVHNGEIEEAYRLFERM---------PG-------------------------- 262
+++I Y N + EA F M P
Sbjct: 302 SAIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLR 361
Query: 263 ----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
D + + +IT + GNL+K+ +F+M KD V W ++I+G+ + EEA
Sbjct: 362 RSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHI 421
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F +M + P+ +T L+A + T + +G I S+ +K
Sbjct: 422 FDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDI------------------FNSMRTK 463
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
G + + Y M+ + GL +EAL L + M E P+ + + ++
Sbjct: 464 SGI------------KPGLEHYACMVDLLGRAGLVDEALYLIKTMPVE---PDAVIWGAL 508
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
+ AC + + I S K L +EPG
Sbjct: 509 MGACR---MHKNAEIAEISAKKLLELEPG 534
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 54/286 (18%)
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
++ N+ I R G M+ A F M R S+N+L++GY N + A R+F RMP
Sbjct: 17 VVDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPT 76
Query: 263 KDFVSWTTMITGFSSK---------------------------------GNLEKSIELFN 289
+D S+ +I+G S + G L +I+LF
Sbjct: 77 RDLASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFR 136
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
MPE++ +++T ++ GF++ + +EA + F EM KDV + +++LS +++
Sbjct: 137 QMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDV----VAWTAMLSGYCQVGRVDE 192
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
+ + K N+ S ++VS Y++ G V A ++F + ERN VS+ +M+ G+ Q
Sbjct: 193 ARTLFDEMPKRNVVS----WTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQ 248
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH--VGLVEEGFI 453
G E+A LF M D L+ACN VG ++G +
Sbjct: 249 AGRIEDAEELFNAMPDH-----------PLAACNGMIVGFGQQGMV 283
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/701 (32%), Positives = 355/701 (50%), Gaps = 121/701 (17%)
Query: 19 NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNAL 77
+NC I +A+ +F + N S+ MI+GF G EAE+L+ MP R DSV N++
Sbjct: 50 SNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPER--DSVSWNSM 107
Query: 78 ISGY------------------------------------------------LKVGRCEE 89
+SGY +K G +
Sbjct: 108 MSGYFHNGELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDF 167
Query: 90 AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
A ++F + W SM+ GY K G V +A E+F KMPE++ V+W M+ +
Sbjct: 168 AQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFG 227
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
+ + FL M G NS+T + AC + G +H + R D+ G +
Sbjct: 228 AETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGL 287
Query: 210 ITMY---GRL----------------------------GFMDEANKVFSMMSKRDAVS-- 236
I MY GRL GF +EA +F+ M + S
Sbjct: 288 IDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQ 347
Query: 237 -------------------------------------WNSLISGYVHNGEIEEAYRLFER 259
N+L++ Y G++ +A FE
Sbjct: 348 FTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFEL 407
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
MP +D +SWT MIT FS G++EK+ E F+ MPE++ ++W ++++ ++ +EE + +
Sbjct: 408 MPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVY 467
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
I+MLR+ V+ + +T S+ +SA A A L G+QI A K+ S+VS+ NS+V++YS+C
Sbjct: 468 IQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRC 527
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G + +A ++F++I +N+VS+N+M++G+AQNG G + + +F KM + G VP+QI+++SVL
Sbjct: 528 GQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVL 587
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
S C+H G V EG YF SM + I P EH+ CMVD+LGRAG L +A +LIN M F+P
Sbjct: 588 SGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPN 647
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
+WGALL A R H N LA+LA ++L+EL+ + Y +L+++YS GK + VR
Sbjct: 648 AAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKL 707
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
+ K +RK+PGCSWI + ++VH+F + +K++ L
Sbjct: 708 MRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 179/368 (48%), Gaps = 53/368 (14%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N L++ Y G +A R+F ++ +V +W +M+ G+ G++ EA ++F+KMPE++ V
Sbjct: 43 NHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSV 102
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W +M+ GY F++ L +A G + +Q+HG
Sbjct: 103 SWNSMMSGY----------------------FHNGELEATIKASGSLGYLKLALQLHGFA 140
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+F F D + S++ MY + G MD A KVF WNS+I GY G +++A
Sbjct: 141 EKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKAL 200
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
LF +MP +D VSW TMI+ S G F E
Sbjct: 201 ELFAKMPERDTVSWNTMISILSQHG--------FG-----------------------AE 229
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
F+EM + RPN +T +SVLSA + L G+ +HA +V+M DV L+
Sbjct: 230 TLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLID 289
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+KCG + A ++F + E N VS+ S+I G AQ G EEAL LF +M++ + +Q T
Sbjct: 290 MYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFT 349
Query: 435 FLSVLSAC 442
+VL C
Sbjct: 350 LATVLGVC 357
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 142/342 (41%), Gaps = 59/342 (17%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
D + NA++T + +++A F MP+R+ +S+ AMIT F + G +A E +
Sbjct: 379 DSSVPVANALVT-MYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFD 437
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK---------------------- 100
MP R+ + N++++ Y++ G EE +++ M+ +
Sbjct: 438 KMPE--RNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVL 495
Query: 101 -----------------DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
+V S+V Y + G++ EA+++F + KN+V+W AM+ GY
Sbjct: 496 ILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGY 555
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG-------VQVHGLVSR 196
+ ++F M G + I+ + C EG + HG +S
Sbjct: 556 AQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHG-ISP 614
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEI---EE 252
+ ++ + GR G +++A + + M K +A W +L++ +G E
Sbjct: 615 MSEHFV-----CMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAEL 669
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
A + + + S+ + +S G ++ + +M +K
Sbjct: 670 AVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDK 711
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/608 (34%), Positives = 326/608 (53%), Gaps = 45/608 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--VNMPARWRDSVCSNALISGYLK 83
A +F M + V++ +I+G + G A +++ + + D V +L++
Sbjct: 198 AERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACAS 257
Query: 84 VGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
VG ++ ++ +++ D + GS++D Y K G + A +IF+ NVV W M
Sbjct: 258 VGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLM 317
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ Y ++ F++F M+ G+ N T + C + G Q+H L + GF
Sbjct: 318 LVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGF 377
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ D+ + +I MY + G +D+A K+ M+ KRD VSW S+I+GYV + EEA F+
Sbjct: 378 ESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKE 437
Query: 260 MP---------------------------------------GKDFVSWTTMITGFSSKGN 280
M D W T++ ++ G
Sbjct: 438 MQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGR 497
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
E++ LF + KD++TW +ISGF + Y++A F++M + + N T S +SA
Sbjct: 498 SEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISA 557
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A A + QG Q+H VK S+ + N+L+SLY KCG++ DA IF+ + RN VS+
Sbjct: 558 LANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSW 617
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
N++I+ +Q+G G EAL+LF +MK EGL PN +TF+ VL+AC+HVGLVEEG YFKSM
Sbjct: 618 NTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSN 677
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
+Y + P P+HYAC+VDILGRAG L A ++ M +W LL A + H N+++ +
Sbjct: 678 VYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGE 737
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
LAA+HL+ELEP + YV+LS+ Y+V GK + ++VR K + IRK PG SWI +K+ V
Sbjct: 738 LAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAV 797
Query: 581 HLFLAGRK 588
H F G +
Sbjct: 798 HAFFVGDR 805
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 143/580 (24%), Positives = 277/580 (47%), Gaps = 55/580 (9%)
Query: 12 MITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS 71
++ L N +++A ++F + R+ VS+ AM++G+ + G+ EA LY M W
Sbjct: 83 LLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQM--HWTAV 140
Query: 72 VCSNALISGYLKV---GRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEARE 123
+ + ++S L G+ R+ A V K + +++ Y G A
Sbjct: 141 IPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAER 200
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F M + V + ++ G+ + E +F M+ G+ + +T+ L AC
Sbjct: 201 VFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
++G Q+H + + G +D I S++ +Y + G ++ A+ +F++ + + V WN ++
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVA 320
Query: 244 YVHNGEIEEAYRLFERMPG---------------------------------------KD 264
Y ++ +++ +F +M D
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESD 380
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+I +S G L+K+ ++ M+ ++D V+WT++I+G+V ++ EEA F EM
Sbjct: 381 MYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD 440
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
V P+ + L+S SA A + QG QIHA V +D+SI N+LV+LY++CG +
Sbjct: 441 CGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEE 500
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A+ +F I+ ++ +++N +ISGF Q+ L ++AL +F KM G N TF+S +SA +
Sbjct: 501 AFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALAN 560
Query: 445 VGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
+ +++G ++ +++KT + E E ++ + G+ GS+ +A + + M+ W
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSE--TEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-W 617
Query: 504 GALLGAGRTH-LNLDLAKLAAQHLME-LEPDSATPYVVLS 541
++ + H L+ L Q E L+P+ T VL+
Sbjct: 618 NTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLA 657
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 215/485 (44%), Gaps = 73/485 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D + N LI Y K G +A ++F+ + +D V+W +M+ GY + G EA ++ +M
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMH 136
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
WTA++ L+ + AC + + +G
Sbjct: 137 ------WTAVIP-------------------------TPYVLSSVLSACTKGKLFAQGRM 165
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H V + F + +GN++I +Y G A +VF M D V++N+LISG+ G
Sbjct: 166 IHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGH 225
Query: 250 IEEAYRLFERM--------------------------PGK-------------DFVSWTT 270
E A ++F+ M GK D+++ +
Sbjct: 226 GECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
++ + G++E + ++FN+ + V W ++ + ++F F +M + PN
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
Q T +L T + G QIH+ +K ESD+ + L+ +YSK G + A +I
Sbjct: 346 QFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILE 405
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+++R++VS+ SMI+G+ Q+ EEAL F++M+D G+ P+ I S SAC + + +
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQ 465
Query: 451 GF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G I+ + + Y + + +V++ R G EA L + + G + G
Sbjct: 466 GLQIHARVYVSGYAADISI--WNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGF 523
Query: 510 GRTHL 514
G++ L
Sbjct: 524 GQSRL 528
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 158/327 (48%), Gaps = 40/327 (12%)
Query: 165 AFNSITLTILFEAC-GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
A S LT +AC GR R+ +++H G D ++GN +I +Y + G + +A
Sbjct: 39 ALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQAR 98
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------PGK 263
+VF +S RD VSW +++SGY +G +EA+RL+ +M GK
Sbjct: 99 QVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGK 158
Query: 264 DFVS-------------------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
F +I + G+ + + +F M D VT+ +IS
Sbjct: 159 LFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLIS 218
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G E A + F EM +RP+ +T++S+L+A A+ L +G Q+H++++K M
Sbjct: 219 GHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSF 278
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D + SL+ LY KCG++ A+ IF D N+V +N M+ + Q ++ +F +M+
Sbjct: 279 DYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQ 338
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEG 451
G+ PNQ T+ +L C G +E G
Sbjct: 339 ATGIHPNQFTYPCILRTCTCTGQIELG 365
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 11/239 (4%)
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
R G D + +I ++ G + ++ ++F + +D V+W A++SG+ + +EAFR
Sbjct: 72 RGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRL 131
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
+ +M V P LSSVLSA QG IHA V K S+ + N+L++LY
Sbjct: 132 YSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLG 191
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
G+ A R+F ++ + V++N++ISG AQ G GE AL +F +M+ GL P+ +T S+
Sbjct: 192 FGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASL 251
Query: 439 LSACNHVGLVEEG-----FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
L+AC VG +++G ++ M Y E ++D+ + G + A D+ N
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMSFDYITE------GSLLDLYVKCGDIETAHDIFN 304
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 128/283 (45%), Gaps = 15/283 (5%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP---ARWRDSVCSNALISGY 81
EAF +F + ++ +++ +I+GF + ++ +A +++ M A++ +A IS
Sbjct: 500 EAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISA-ISAL 558
Query: 82 LKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ ++ ++ V+ + +++ Y K G + +A+ IF +M +N V+W
Sbjct: 559 ANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWN 618
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR- 196
++ + + DLF M++ G+ N +T + AC EG+ +S
Sbjct: 619 TIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNV 678
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANK-VFSMMSKRDAVSWNSLISGY-VH-NGEIEE- 252
+G + ++ + GR G +D A + V M +A+ W +L+S VH N EI E
Sbjct: 679 YGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGEL 738
Query: 253 -AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
A L E P D S+ + ++ G ++ MM ++
Sbjct: 739 AAKHLLELEP-HDSASYVLLSNAYAVTGKWANRDQVRKMMKDR 780
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/647 (32%), Positives = 365/647 (56%), Gaps = 49/647 (7%)
Query: 14 TALINNN--CS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--W 68
TALIN + C + +A ++F +P R+ +++ +MITG R F +A L+ M
Sbjct: 244 TALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQ 303
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREI 124
D V +L+ E+ R+ M E ++ +++ Y K G + +A E+
Sbjct: 304 PDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEV 363
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F+ + +NVV+WTAM+ G+ + E+ F F M G+ N +T + AC R
Sbjct: 364 FNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSAL 423
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
++G Q+H + + G+ D + ++++MY + G + +A VF +SK++ V+WN++I+ Y
Sbjct: 424 KQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAY 483
Query: 245 VHNGEIEEAYRLFERMPGK----DFVSWTTMI---------------------TGFSSK- 278
V + + + A F+ + + D ++T+++ GF S
Sbjct: 484 VQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDL 543
Query: 279 -------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
G+L ++ LFN MPE+D V+W II+GFV + + + AF +F M
Sbjct: 544 HIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQES 603
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
V+P+Q+T + +L+A A+ L +G ++HA + + ++ DV + L+S+Y+KCG++ DA
Sbjct: 604 GVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDA 663
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+ +F N+ ++N+ S+ SMI+G+AQ+G G+EAL LF +M+ EG+ P+ ITF+ LSAC H
Sbjct: 664 HLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHA 723
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GL++EG +F+SMK +NIEP EHY CMVD+ GRAG L EA++ IN M +P +WGA
Sbjct: 724 GLIKEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGA 782
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA + HL+++LA+ AQ +EL+P+ YV+LS++Y+ G ++ ++R + +
Sbjct: 783 LLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGV 842
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
K PG SWI + +VH+F + K+ ++EI L + K+ +
Sbjct: 843 VKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGY 889
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 235/436 (53%), Gaps = 40/436 (9%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
++ D+ W ++ Y K G A++IFD+MP+K+V +W ++ GY++ +E+ F L
Sbjct: 135 IQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHE 194
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
M + G+ + T + AC +G ++ L+ G+D D+ +G ++I M+ + G
Sbjct: 195 QMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCG 254
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK-DFVSW-- 268
+D+A KVF+ + +RD ++W S+I+G + + ++A LF+ M P K FVS
Sbjct: 255 GVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLK 314
Query: 269 ------------------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
T +++ ++ G++E ++E+FN++ ++ V+
Sbjct: 315 ACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVS 374
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA+I+GF + + EEAF +F +M+ + PN++T S+L A + + L QG QIH ++
Sbjct: 375 WTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRII 434
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K +D ++ +L+S+Y+KCG+++DA +F I ++N+V++N+MI+ + Q+ + A+
Sbjct: 435 KAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVA 494
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F+ + EG+ P+ TF S+L+ C +E G + +S+ E +V +
Sbjct: 495 TFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVSMF 553
Query: 479 GRAGSLAEAIDLINSM 494
G L A++L N M
Sbjct: 554 VNCGDLMSAMNLFNDM 569
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 252/475 (53%), Gaps = 53/475 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +IF MP ++ S+ ++ G+V+ + EA L+ M +D V + Y+ +
Sbjct: 158 AKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMV---QDGVKPDKYTFVYM-LN 213
Query: 86 RCEEA----------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
C +A + I A + D+ ++++ + K G V +A ++F+ +P ++++
Sbjct: 214 ACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLIT 273
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT+M+ G + F+ +LF M G+ + + L +AC +G +VH +
Sbjct: 274 WTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMK 333
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
G D +I +G ++++MY + G M++A +VF+++ R+ VSW ++I+G+ +G +EEA+
Sbjct: 334 EVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFL 393
Query: 256 LFERM------PGK-DFVSW--------------------------------TTMITGFS 276
F +M P + F+S T +++ ++
Sbjct: 394 FFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYA 453
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G+L + +F + +++ V W A+I+ +V +E+Y+ A F +L++ ++P+ T +S
Sbjct: 454 KCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTS 513
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L+ + L G + + +++ ESD+ I+N+LVS++ CG+++ A +F ++ ER+
Sbjct: 514 ILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERD 573
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+VS+N++I+GF Q+G + A + F+ M++ G+ P+QITF +L+AC + EG
Sbjct: 574 LVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG 628
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 227/453 (50%), Gaps = 45/453 (9%)
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
KN A ++ K + + LS+ + + T + L + C + +G ++
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + DI + N +I+MY + G + A ++F M +D SWN L+ GYV +
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186
Query: 251 EEAYRLFERM------PGK---------------------------------DFVSWTTM 271
EEA+RL E+M P K D T +
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
I G ++ ++++FN +P +D +TWT++I+G + Q+++A F M + V+P++
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDK 306
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ S+L A L QG ++HA + ++ +++++ + +L+S+Y+KCG++ DA +F
Sbjct: 307 VAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNL 366
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ RN+VS+ +MI+GFAQ+G EEA F KM + G+ PN++TF+S+L AC+ +++G
Sbjct: 367 VKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQG 426
Query: 452 F-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
I+ + +K Y + ++ + + GSL +A ++ ++ + W A++ A
Sbjct: 427 RQIHDRIIKAGYITDDRVR--TALLSMYAKCGSLMDARNVFERISKQNVVA-WNAMITAY 483
Query: 511 RTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
H D A Q L++ ++PDS+T +L+
Sbjct: 484 VQHEKYDNAVATFQALLKEGIKPDSSTFTSILN 516
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
F +TT +G SKG + +++ K+ A ++ Q EA + +
Sbjct: 44 FRLYTTSFSGSYSKGQGNEFVDI------KNTQRANAFLNRLSKAGQLSEAMLVLLSVDS 97
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
++ ++ T SS+L L G +IH H+ ++ D+ + N L+S+Y+KCGN
Sbjct: 98 PHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNS 157
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A +IF + ++++ S+N ++ G+ Q+ EEA L +M +G+ P++ TF+ +L+AC
Sbjct: 158 AKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACAD 217
Query: 445 VGLVEEG 451
V++G
Sbjct: 218 AKNVDKG 224
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 329/553 (59%), Gaps = 11/553 (1%)
Query: 52 GMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFE-AMVEKDVVAWGSMVD 110
G +A L+ P R D V AL++ Y + G +A +F+ ++VV W +++
Sbjct: 49 GRVSDARRLFDRTPDR--DVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLS 106
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
GY + GRV EA +F +MPE+NVV+W M++ Y D + LF M +I
Sbjct: 107 GYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNIL 166
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L L + G + R+ L R + +++ +++ R G +DEA +F M
Sbjct: 167 LAALVRS-GNMDKARK------LFDRMP-ERNVMAWTTMVAGIARSGSVDEARALFDGMP 218
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
+R+ VSWN++ISGY N I+EA+ LF +MP +D SW MITGF +LE++ +LF+
Sbjct: 219 ERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQDLFDK 278
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP ++ +TWT +++G++ + Q E A + F ML + +RPNQ+T + A + A L++G
Sbjct: 279 MPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEG 338
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q+H + K + + D I+++L++LY+KCG + A ++F E++++S+N MI+ +A +
Sbjct: 339 QQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHH 398
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
G+G EA++L+ KM+++G PN +T++ +LSAC+H GLV+EG F+ M +I EH
Sbjct: 399 GVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEH 458
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE 530
Y C++D+ RAG L +A LI+ + EP VW ALLG +H N + LAA++L+E E
Sbjct: 459 YTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAE 518
Query: 531 PDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSC 590
P++A Y +L ++Y+ GK ++ ++R + + ++K PGCSWI +++KVH+F++ KS
Sbjct: 519 PNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVENKVHVFVSRDKSH 578
Query: 591 LDLKEIEVTLQTI 603
+ I LQ I
Sbjct: 579 SESDLINSLLQDI 591
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 209/406 (51%), Gaps = 16/406 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N ++ AL+ + ++ +A ++F MP RN +++ M+ G R G EA L
Sbjct: 155 MPVRDAGSWNILLAALVRSG-NMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARAL 213
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ V NA+ISGY + R +EA +F M +D+ +W M+ G+ + +
Sbjct: 214 FDGMPE--RNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLER 271
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+++FDKMP +NV+ WT M++GY++ E +F M G+ N +T +AC
Sbjct: 272 AQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSN 331
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
EG QVH ++ + F +D + ++++ +Y + G + A KVF + ++D +SWN +
Sbjct: 332 LAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGM 391
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I+ Y H+G EA L+E+M K + V++ +++ S G +++ + +F M +
Sbjct: 392 IAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRS 451
Query: 297 VT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ +T +I + +A R I L+ V P+ +++L + + G
Sbjct: 452 IAVRDEHYTCLIDLCSRAGRLGDAKR-LIHFLK--VEPSSTVWNALLGGCNSHGNESIGD 508
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
++++ ++ L ++Y+ G +A +I + +++R +
Sbjct: 509 LAARNLLEAE-PNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGL 553
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 216/455 (47%), Gaps = 61/455 (13%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATM-PMRNAVSYAAMITGFVRRGMFYEAEELY 61
DR S+ A++ A +++A +F RN V++ A+++G+ R G EAE L+
Sbjct: 63 DRDVVSWTALVAAYARQGM-LHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALF 121
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
MP R+ V N ++ Y GR +A +F+ M +D +W ++ + G + +A
Sbjct: 122 QRMPE--RNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKA 179
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
R++FD+MPE+NV+AWT MV G + ++ LF M N ++ + R
Sbjct: 180 RKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPE----RNVVSWNAMISGYARN 235
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
R E H L + DI N +IT + + ++ A +F M +R+ ++W +++
Sbjct: 236 HRIDEA---HDLFMKMP-TRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMM 291
Query: 242 SGYVHNGEIEEAYRLFERM------PGK-------------------------------- 263
+GY+ + + E A ++F M P +
Sbjct: 292 NGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQ 351
Query: 264 -DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
D +T++ ++ G + + ++F++ EKD ++W +I+ + ++ EA + +M
Sbjct: 352 FDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKM 411
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS----LVSLYSK 378
K +PN +T +LSA + + +++G +I ++VK + +++++ L+ L S+
Sbjct: 412 QEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVK---DRSIAVRDEHYTCLIDLCSR 468
Query: 379 CGNVVDAYRI--FTNIDERNIVSYNSMISGFAQNG 411
G + DA R+ F ++ + V +N+++ G +G
Sbjct: 469 AGRLGDAKRLIHFLKVEPSSTV-WNALLGGCNSHG 502
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+++ V N V+ + G V DA R+F +R++VS+ ++++ +A+ G+ +A L
Sbjct: 29 VDVSGHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARAL 88
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F + N +T+ ++LS G V+E F+ M E + M++
Sbjct: 89 FDRPDAR---RNVVTWTALLSGYARAGRVDEAEALFQRMP-----ERNVVSWNTMLEAYT 140
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
AG + +A L + M G W LL A N+D A+
Sbjct: 141 SAGRVRDAWTLFDGMPVR-DAGSWNILLAALVRSGNMDKAR 180
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/666 (33%), Positives = 366/666 (54%), Gaps = 59/666 (8%)
Query: 14 TALIN--NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------ 64
TAL++ + C + AF IF MP RN+V ++A+I G+VR F E +LY M
Sbjct: 209 TALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMG 268
Query: 65 --PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
A + + S A +S + ++G + A + D + + +D Y K R+++AR
Sbjct: 269 VSQATFASAFRSCAGLSAF-ELGT-QLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDAR 326
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
++F+ P + A++ GY + D + ++F S+++ + F+ I+L+ AC
Sbjct: 327 KVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIK 386
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
Y EG+Q+HGL + G D++I + N+I+ MY + G + EA +F M +DAVSWN++I+
Sbjct: 387 GYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIA 446
Query: 243 GYVHNGEIEEAYRLFERM------P---------------------------------GK 263
+ N +EE LF M P G
Sbjct: 447 AHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGL 506
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
D+ + +I + G L ++ ++ + E+ V+W +IISGF + +Q E A +F ML
Sbjct: 507 DWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRML 566
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ V P+ T ++VL A AT+ G QIH ++K+ + SDV I +++V +YSKCGN+
Sbjct: 567 QVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQ 626
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
D+ +F +R+ V++++MI +A +GLGE+A+ LF +M+ + + PN F+SVL AC
Sbjct: 627 DSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACA 686
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H+G V++G YF+ M++ Y ++P EHY+CMVD+LGR+G + EA++LI SM FE +W
Sbjct: 687 HMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIW 746
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
LLG R N+++A+ AA L++L+P ++ YV+LS++Y++ G + ++R K
Sbjct: 747 RTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNY 806
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW----PKHDWSL 619
+++K PGCSWI ++D+VH FL G K+ +EI Q E W P+ D L
Sbjct: 807 KLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEI---YQQTHLLVDEMKWDGYVPEIDGFL 863
Query: 620 LGLERD 625
L E D
Sbjct: 864 LDEEVD 869
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 166/599 (27%), Positives = 267/599 (44%), Gaps = 92/599 (15%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
AF +F MP R+ +S+ MI G+ G A+ L+ +MP RD V N+++S YL+ G
Sbjct: 92 AFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPE--RDVVSWNSMLSCYLQNG 149
Query: 86 RCEEAARIFEAM---------------------------------------VEKDVVAWG 106
++ IF M + DVV
Sbjct: 150 FHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGT 209
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
++VD Y ++ A IF +MPE+N V W+A++ GY++ D F +G L+ M GM
Sbjct: 210 ALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGV 269
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T F +C + G Q+H + F YD I+G + + MY + M +A KVF
Sbjct: 270 SQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVF 329
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------- 261
+ S N+LI GY ++ EA +F +
Sbjct: 330 NTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYL 389
Query: 262 ------------GKDF--VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
G DF T++ ++ G L ++ +F+ M KD V+W AII+
Sbjct: 390 EGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHE 449
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
NE EE F+ MLR + P+ T SV+ A A LN G ++H V+K M D
Sbjct: 450 QNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWF 509
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ ++++ +Y KCG +V+A +I ++ER VS+NS+ISGF+ GE AL+ F +M G
Sbjct: 510 VGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVG 569
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
++P+ T+ +VL C ++ VE G + L + + +VD+ + G++ ++
Sbjct: 570 VIPDNFTYATVLDICANLATVELGKQIHGQILKL-QLHSDVYIASTIVDMYSKCGNMQDS 628
Query: 488 IDLINSMTFEPPPG----VWGALLGAGRTH-LNLDLAKLAAQ-HLMELEPDSATPYVVL 540
+ FE P W A++ A H L D KL + L ++P+ VL
Sbjct: 629 -----RIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVL 682
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 203/408 (49%), Gaps = 39/408 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN L+ Y K A +F+ M ++DV++W +M+ GY G + A+ +FD MPE++V
Sbjct: 76 SNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDV 135
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W +M+ Y++ ++F MR + + T ++ +AC Y G+QVH L
Sbjct: 136 VSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCL 195
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ GFD D++ G +++ MY +D A +F M +R++V W+++I+GYV N E
Sbjct: 196 AIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEG 255
Query: 254 YRLFERMPGKDF-VSWTTMITGFSSKGNLE------------------------------ 282
+L++ M + VS T + F S L
Sbjct: 256 LKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDM 315
Query: 283 --------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ ++FN P + A+I G+ +Q EA F + + + ++++L
Sbjct: 316 YAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISL 375
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S L+A +A +G Q+H VK ++ ++ + N+++ +Y+KCG +++A IF +++
Sbjct: 376 SGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEI 435
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
++ VS+N++I+ QN EE L LF M + P+ TF SV+ AC
Sbjct: 436 KDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKAC 483
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 137/283 (48%), Gaps = 31/283 (10%)
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
+T + +F+ C G Q H ++ GF + + N ++ Y +
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCL----------- 87
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
+ A+ +F++MP +D +SW TMI G++ GN+E + LF
Sbjct: 88 --------------------NLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLF 127
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ MPE+D V+W +++S ++ N + ++ F +M +++ + T + VL A
Sbjct: 128 DSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYG 187
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G Q+H ++M +SDV +LV +YS C + A+ IF + ERN V ++++I+G+
Sbjct: 188 LGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYV 247
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+N E L L++ M DEG+ +Q TF S +C + E G
Sbjct: 248 RNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 31/146 (21%)
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+LT S + + +N G Q HA + V + N L+ Y KC N+ A+ +F
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 391 NIDERNIVSYNSMISGFA-------------------------------QNGLGEEALNL 419
+ +R+++S+N+MI G+A QNG +++ +
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHV 445
F KM+ + + TF VL AC +
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGI 183
>gi|357438957|ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 891
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/570 (34%), Positives = 331/570 (58%), Gaps = 43/570 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+ EA ++F M R++ + MI+G+++ G+ EA +L+ + P + + A++SGY+
Sbjct: 61 VNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLF-DRPDAQKSVIVWTAMVSGYI 119
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
K+ R EEA R+F M ++VV+W +M+DGY + GR EA ++F +MPE+NVV+W ++
Sbjct: 120 KMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTA 179
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+D LF MR + D
Sbjct: 180 LAHCGRIDDAERLFNEMR---------------------------------------ERD 200
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
++ +++ + G +D A +VF M R+ VSWN++I+GY NG +EA +LFERMP
Sbjct: 201 VVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPE 260
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
+D SW TM+TGF G+L ++ +LF+ MP+K+ +TWTA+++G+V + EEA + F +M
Sbjct: 261 RDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKM 320
Query: 323 LRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
D ++P T +VL A + A L +G QIH + K + + ++L+++YSKCG+
Sbjct: 321 QANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGD 380
Query: 382 VVDAYRIFTN--IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
A ++F + +++++N MI+ +A +G G EA+NLF KM++ G N +T++ +L
Sbjct: 381 FHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLL 440
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
+AC+H GL +EGF YF + I+ +HY C++D+ GRAG L EA+++I + E
Sbjct: 441 TACSHAGLFDEGFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVS 500
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
+WGALL H N D+ KL A ++++EP++A Y++ S++Y+ +G + + VRMK
Sbjct: 501 LSLWGALLAGCSVHGNADIGKLVADKVLKMEPENADTYLLASNMYASVGMREEAANVRMK 560
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
K K ++K PGCSWI + + V +F+ KS
Sbjct: 561 MKKKGLKKQPGCSWIDVGNTVQVFVVNDKS 590
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 56/301 (18%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG------------------ 248
N I+ R G ++EA KVF MSKRD+ W ++ISGY+ G
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSV 108
Query: 249 --------------EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
IEEA RLF MP ++ VSW TMI G++ G +++++LF MPE+
Sbjct: 109 IVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPER 168
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP---------------------NQLT 333
+ V+W +++ + + ++A R F EM +DV +++
Sbjct: 169 NVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMP 228
Query: 334 LSSVLSASAATATLNQGSQIHA--HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ +V+S +A A Q + + + E D+ N++V+ + + G++ A ++F
Sbjct: 229 IRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHA 288
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMK-DEGLVPNQITFLSVLSACNHVGLVEE 450
+ ++N++++ +M++G+ Q+GL EEAL LF KM+ ++GL P TF++VL AC+ + + E
Sbjct: 289 MPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPE 348
Query: 451 G 451
G
Sbjct: 349 G 349
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 190/428 (44%), Gaps = 75/428 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+ M+ L + N + A E+F MP+RN VS+ AMI G+ + G F EA +L
Sbjct: 196 MRERDVVSWTTMVAGL-SKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKL 254
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP RD N +++G+++ G A ++F AM +K+V+ W +M+ GY + G E
Sbjct: 255 FERMPE--RDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEE 312
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++F+KM + G+ + T + AC
Sbjct: 313 ALKLFNKMQAND------------------------------GLKPTTGTFVTVLGACSD 342
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS--MMSKRDAVSWN 238
EG Q+H ++S+ F + +++I MY + G A K+F + D ++WN
Sbjct: 343 LAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWN 402
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
+I+ Y H+G EA LF +M F + +DVT
Sbjct: 403 GMIAAYAHHGYGNEAINLFNKMQELGF---------------------------QANDVT 435
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRK---DVRPNQLTLSSVLSASAATATLNQGSQIHA 355
+ +++ + ++E F++F E+L+ VR + T ++ L++ I
Sbjct: 436 YVGLLTACSHAGLFDEGFKYFDELLKNRYIQVREDHYT--CLIDLCGRAGRLDEALNI-- 491
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN----IDERNIVSYNSMISGFAQNG 411
+ + E +S+ +L++ S GN D ++ + ++ N +Y + +A G
Sbjct: 492 -IEGLGKEVSLSLWGALLAGCSVHGN-ADIGKLVADKVLKMEPENADTYLLASNMYASVG 549
Query: 412 LGEEALNL 419
+ EEA N+
Sbjct: 550 MREEAANV 557
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ S++ N +S + G V +A ++F + +R+ + +MISG+ + GL EA LF
Sbjct: 41 LTSEMKRCNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFD 100
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
+ + V I + +++S + +EE F M + + M+D R
Sbjct: 101 RPDAQKSV---IVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVS-----WNTMIDGYARN 152
Query: 482 GSLAEAIDLINSM 494
G EA+DL M
Sbjct: 153 GRTQEALDLFGRM 165
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/535 (37%), Positives = 318/535 (59%), Gaps = 40/535 (7%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC-KKGRVIEAREIFDKMPE 130
+ SN +I+ +++ G A R+FE+M K V W SM+ GY ++G++ AR++FD++PE
Sbjct: 6 ISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPE 65
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
++ ++ M+ Y+ E R F + V+
Sbjct: 66 PDIFSYNIMLACYLHNADVESA---------------------------RLFFDQMPVK- 97
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
D N++I+ + + G MD+A ++F +M R++VSWN++ISGYV +G++
Sbjct: 98 -----------DTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDL 146
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+ A +LFE P + V+WT MITGF G +E + + F MP K+ VTW A+I+G++ N
Sbjct: 147 DLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENC 206
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
Q E + F M+ RPN +LSSVL + + L G Q+H + K + +++
Sbjct: 207 QAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGT 266
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SL+S+Y KCG++ DA+++F + ++++V++N+MISG+AQ+G GE+AL LF KM+DEG+ P
Sbjct: 267 SLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKP 326
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+ ITF++VLSACNH G V+ G YF SM Y +E P+HY C+VD+LGR G L EA+DL
Sbjct: 327 DWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDL 386
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I M F+P ++G LLGA R H NL+LA+ AA++L+ L+P+SA YV L+++Y+ + +
Sbjct: 387 IKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRW 446
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
VR K ++ K+PG SWI +K VH F +G + +L I L + +
Sbjct: 447 DHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELER 501
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 170/288 (59%), Gaps = 7/288 (2%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
SYN M+ ++N + A F MP+++ S+ MI+GF + GM +A EL++ MP R
Sbjct: 70 SYNIMLACYLHN-ADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVR 128
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
+SV NA+ISGY++ G + A ++FE + VVAW +M+ G+ K G++ A + F++
Sbjct: 129 --NSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEE 186
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
MP KN+V W AM+ GY++ E+G LF M G N +L+ + C + G
Sbjct: 187 MPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLG 246
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
QVH L+ + ++I G S+++MY + G +++A K+F +M ++D V+WN++ISGY +
Sbjct: 247 KQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQH 306
Query: 248 GEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
G E+A LF++M + D++++ +++ + G ++ IE FN M
Sbjct: 307 GAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSM 354
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 212/472 (44%), Gaps = 90/472 (19%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL-KVGRCEEAARIFE 95
N +S +IT +R G A ++ +M + +V N++++GY + G+ + A ++F+
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVK--TTVTWNSMLAGYSNRRGKIKVARQLFD 61
Query: 96 AMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
+ E D+ ++ M+ Y V AR FD+MP K+ +W M+ G+ + + +L
Sbjct: 62 RIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQAREL 121
Query: 156 FLSMR-RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
FL M R +++N++ + G ++ +V + S ++ ++IT +
Sbjct: 122 FLVMPVRNSVSWNAMISG--YVESGDLDLAKQLFEVAPVRS-------VVAWTAMITGFM 172
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF--------- 265
+ G ++ A K F M ++ V+WN++I+GY+ N + E +LF+RM F
Sbjct: 173 KFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSS 232
Query: 266 -------------------------VSW-----TTMITGFSSKGNLEKSIELFNMMPEKD 295
VSW T++++ + G+LE + +LF +MP+KD
Sbjct: 233 VLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKD 292
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
VTW A+ISG+ + E+A F +M + ++P+ +T +VLSA HA
Sbjct: 293 VVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACN-----------HA 341
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
V + +E NS+V Y E Y ++ + G E
Sbjct: 342 GFVDLGIE----YFNSMVRDYGV---------------EAKPDHYTCVVDLLGRGGKLVE 382
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACN-HVGLVEEGFIYFKSMKTLYNIEP 466
A++L +KM P+ F ++L AC H L F + K L N++P
Sbjct: 383 AVDLIKKMP---FKPHSAIFGTLLGACRIHKNLELAEF----AAKNLLNLDP 427
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA-QNGLGEEALNLFRK 422
S+V N +++ + + G++ A R+F ++ + V++NSM++G++ + G + A LF +
Sbjct: 3 SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDR 62
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
+ + P+ ++ +L+ H VE ++F M + M+ + G
Sbjct: 63 IPE----PDIFSYNIMLACYLHNADVESARLFFDQMPV-----KDTASWNTMISGFSQNG 113
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEP 531
+ +A +L M W A++ +LDLAK L E+ P
Sbjct: 114 MMDQARELFLVMPVRNSVS-WNAMISGYVESGDLDLAK----QLFEVAP 157
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/538 (37%), Positives = 316/538 (58%), Gaps = 41/538 (7%)
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
MP RD+V N++I+GY K G +E+ R+F M K+VV+W SM+ G + R+ EA +
Sbjct: 1 MP--HRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQ 58
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
F MP++N +W AM+ G ++ D E+ LF M R
Sbjct: 59 YFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPR---------------------- 96
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
++I +++ Y ++G +++A +F+ M +++ VSW +ISG
Sbjct: 97 -----------------RNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISG 139
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
YV NG+ +EA LFE+MP K+ V+ T MITG+ +G +K+ LF+ +P +D +W A+I
Sbjct: 140 YVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMI 199
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
+G+ N EEA + +ML+ ++P+ TL SVL+A ++ A+L +G + H V+K E
Sbjct: 200 TGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYE 259
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
S +SI N+L+++Y KCG+++D+ F ID ++VS+N+MI+ FA++G + AL F +M
Sbjct: 260 SRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEM 319
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
+ + P+ ITFLS+LSAC H G V E +F SM Y I P PEH+AC+VDIL R G
Sbjct: 320 RSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQ 379
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
+ +A +I M FE G+WGALL A HLN+ L +LAA+ ++ELEP ++ YVVLS++
Sbjct: 380 VEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNI 439
Query: 544 YSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
Y+ G + RVR + + ++K P SW+ + +KVH FL S ++ I + L+
Sbjct: 440 YAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEIHRIRLELK 497
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 179/331 (54%), Gaps = 12/331 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R +AS+NAMI+ L+ + + EA +F MP RN +SY AM+ G+ + G +A L
Sbjct: 63 MPQRNTASWNAMISGLVRYD-RVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARAL 121
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP ++ V +ISGY++ G+ +EA +FE M +K++VA +M+ GYCK+G+ +
Sbjct: 122 FNCMP--QKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDK 179
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+ +FD++P +++ +W AM+ GY + E+ L M + GM + TL + AC
Sbjct: 180 AKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSS 239
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+EG + H LV + G++ I + N++ITMY + G + ++ F + D VSWN++
Sbjct: 240 LASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAM 299
Query: 241 ISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I+ + +G + A F M D +++ ++++ G + +S+ FN M E
Sbjct: 300 IAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYK 359
Query: 297 VT-----WTAIISGFVNNEQYEEAFRWFIEM 322
+ + ++ Q E+A++ EM
Sbjct: 360 IVPRPEHFACLVDILSRGGQVEKAYKIIQEM 390
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 201/436 (46%), Gaps = 90/436 (20%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N++IT N C E+ +F MP +N VS+ +MI G + EA +
Sbjct: 1 MPHRDTVSWNSIITGYWKNGC-FDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQY 59
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R++ NA+ISG ++ R EEA+R+FE M ++V+++ +MVDGY K G + +
Sbjct: 60 FQAMP--QRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQ 117
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +F+ MP+KNVV+WT M+ GY++ F++ +LF M
Sbjct: 118 ARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMP-------------------- 157
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
D +I+ ++IT Y + G D+A +F + RD SWN++
Sbjct: 158 -------------------DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAM 198
Query: 241 ISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEK------------- 283
I+GY NG EEA +L +M D + +++T SS +L++
Sbjct: 199 ITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGY 258
Query: 284 ----SI-----------------EL-FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
SI EL F + D V+W A+I+ F + Y+ A F E
Sbjct: 259 ESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGE 318
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQG-----SQIHAHVVKMNMESDVSIQNSLVSLY 376
M V P+ +T S+LSA +++ S I ++ + E LV +
Sbjct: 319 MRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFA----CLVDIL 374
Query: 377 SKCGNVVDAYRIFTNI 392
S+ G V AY+I +
Sbjct: 375 SRGGQVEKAYKIIQEM 390
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/625 (34%), Positives = 335/625 (53%), Gaps = 48/625 (7%)
Query: 10 NAMITALINNNCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PA 66
NA+IT + C + E +F MP R+ V++ +I+G + G A E++ M
Sbjct: 182 NAVITLYLR--CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
D V ++L++ +G ++ ++ F+A + D + GS++D Y K G V A
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
IF+ NVV W M+ + +++ F+LF M+ G+ N T + C
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G Q+H L + GF+ D+ + +I MY + G++++A +V M+ ++D VSW S+I+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 243 GYVHNGEIEEAYRLFERMP-------------------------------GKDFVS---- 267
GYV + ++A F+ M + +VS
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479
Query: 268 ----WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
W ++ ++ G + ++ F + KD++TW ++SGF + +EEA + F+ M
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD 539
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ V+ N T S LSASA A + QG QIHA V+K + + N+L+SLY KCG+
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
DA F+ + ERN VS+N++I+ +Q+G G EAL+LF +MK EG+ PN +TF+ VL+AC+
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACS 659
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
HVGLVEEG YFKSM Y I P P+HYAC++DI GRAG L A I M VW
Sbjct: 660 HVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVW 719
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
LL A + H N+++ + AA+HL+ELEP + YV+LS+ Y+V K + ++VR + +
Sbjct: 720 RTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRK 588
+RK PG SWI +K+ VH F G +
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDR 804
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/523 (26%), Positives = 261/523 (49%), Gaps = 50/523 (9%)
Query: 12 MITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------P 65
++ L + N + A +F + R+ VS+ AM++G+ + G+ EA LY M P
Sbjct: 82 LLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVP 141
Query: 66 ARW-RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
+ SV S+ + GR A + ++ ++ +++ Y + G A +
Sbjct: 142 TPYVLSSVLSSCTKAELFAQGRLIHA-QGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F MP ++ V + ++ G+ + E ++F M+ G++ + +T++ L AC
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
++G Q+H + + G D I+ S++ +Y + G ++ A +F+ + + V WN ++ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF 320
Query: 245 VHNGEIEEAYRLFERMPGK-------------------------DFVSWTTMITGFSSK- 278
++ +++ LF +M + + ++ TGF S
Sbjct: 321 GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM 380
Query: 279 -------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
G LEK+ + M+ EKD V+WT++I+G+V +E ++A F EM +
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC 440
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ P+ + L+S +S A + QG QIHA + DVSI N+LV+LY++CG + +A
Sbjct: 441 GIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREA 500
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+ F I+ ++ +++N ++SGFAQ+GL EEAL +F +M G+ N TF+S LSA ++
Sbjct: 501 FSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560
Query: 446 GLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+++G I+ + +KT ++ E E ++ + G+ GS +A
Sbjct: 561 AEIKQGKQIHARVIKTGHSFE--TEVGNALISLYGKCGSFEDA 601
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 200/460 (43%), Gaps = 81/460 (17%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
+ N LI Y K G A R+FE + +D V+W +M+ GY + G
Sbjct: 78 IVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG--------------- 122
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
E+ L+ M R G+ L+ + +C + + +G +H
Sbjct: 123 ----------------LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIH 166
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ GF +I +GN++IT+Y R G A +VF M RD V++N+LISG+ G E
Sbjct: 167 AQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGE 226
Query: 252 EAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL-------------------- 287
A +FE M D V+ ++++ +S G+L+K +L
Sbjct: 227 HALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLL 286
Query: 288 ---------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
FN + V W ++ F ++F F +M +RPNQ
Sbjct: 287 DLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQF 346
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T +L T ++ G QIH+ VK ESD+ + L+ +YSK G + A R+ +
Sbjct: 347 TYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
E+++VS+ SMI+G+ Q+ ++AL F++M+ G+ P+ I S +S C + + +G
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466
Query: 453 -----IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
IY +I + +V++ R G + EA
Sbjct: 467 QIHARIYVSGYSGDVSI------WNALVNLYARCGRIREA 500
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)
Query: 153 FDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
LF R + AC G R++ ++H G I+GN +I
Sbjct: 26 LSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLID 85
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTM 271
+Y + G + A +VF +S RD VSW +++SGY NG EEA L+ +M V +
Sbjct: 86 LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV 145
Query: 272 IT-------------------------GFSSK--------------GNLEKSIELFNMMP 292
++ GF S+ G+ + +F MP
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+D VT+ +ISG E A F EM + P+ +T+SS+L+A A+ L +G+Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H+++ K + SD ++ SL+ LY KCG+V A IF + D N+V +N M+ F Q
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIND 325
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKT 460
++ LF +M+ G+ PNQ T+ +L C ++ G I+ S+KT
Sbjct: 326 LAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 131/240 (54%), Gaps = 11/240 (4%)
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
R GK + +I +S G + + +F + +D+V+W A++SG+ N EEA
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
+ +M R V P LSSVLS+ QG IHA K S++ + N++++LY +
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG+ A R+F ++ R+ V++N++ISG AQ G GE AL +F +M+ GL P+ +T S+
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250
Query: 439 LSACNHVGLVEEG-----FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
L+AC +G +++G +++ + + Y +E ++D+ + G + A+ + NS
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIME------GSLLDLYVKCGDVETALVIFNS 304
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M + + ++GF+ +E + F + R+ L + L A Q
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 351 -SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
+IHA V + + N L+ LYSK G V+ A R+F + R+ VS+ +M+SG+AQ
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
NGLGEEAL L+R+M G+VP SVLS+C L +G
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG 162
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/625 (34%), Positives = 335/625 (53%), Gaps = 48/625 (7%)
Query: 10 NAMITALINNNCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PA 66
NA+IT + C + E +F MP R+ V++ +I+G + G A E++ M
Sbjct: 182 NAVITLYLR--CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
D V ++L++ +G ++ ++ F+A + D + GS++D Y K G V A
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
IF+ NVV W M+ + +++ F+LF M+ G+ N T + C
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G Q+H L + GF+ D+ + +I MY + G++++A +V M+ ++D VSW S+I+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 243 GYVHNGEIEEAYRLFERMP-------------------------------GKDFVS---- 267
GYV + ++A F+ M + +VS
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479
Query: 268 ----WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
W ++ ++ G + ++ F + KD++TW ++SGF + +EEA + F+ M
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD 539
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ V+ N T S LSASA A + QG QIHA V+K + + N+L+SLY KCG+
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
DA F+ + ERN VS+N++I+ +Q+G G EAL+LF +MK EG+ PN +TF+ VL+AC+
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACS 659
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
HVGLVEEG YFKSM Y I P P+HYAC++DI GRAG L A I M VW
Sbjct: 660 HVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVW 719
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
LL A + H N+++ + AA+HL+ELEP + YV+LS+ Y+V K + ++VR + +
Sbjct: 720 RTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRK 588
+RK PG SWI +K+ VH F G +
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDR 804
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/523 (26%), Positives = 260/523 (49%), Gaps = 50/523 (9%)
Query: 12 MITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------P 65
++ L + N + A +F + R+ VS+ AM++G+ + G+ EA LY M P
Sbjct: 82 LLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVP 141
Query: 66 ARW-RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
+ SV S+ + GR A + ++ ++ +++ Y + G A +
Sbjct: 142 TPYVLSSVLSSCTKAELFAQGRLIHA-QGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F MP ++ V + ++ G+ + E ++F M+ G++ + +T++ L AC
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
++G Q+H + + G D I+ S++ +Y + G ++ A +F+ + + V WN ++ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF 320
Query: 245 VHNGEIEEAYRLFERMPGKDF-------------------------VSWTTMITGFSSK- 278
++ +++ LF +M + ++ TGF S
Sbjct: 321 GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM 380
Query: 279 -------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
G LEK+ + M+ EKD V+WT++I+G+V +E ++A F EM +
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC 440
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ P+ + L+S +S A + QG QIHA + DVSI N+LV+LY++CG + +A
Sbjct: 441 GIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREA 500
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+ F I+ ++ +++N ++SGFAQ+GL EEAL +F +M G+ N TF+S LSA ++
Sbjct: 501 FSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560
Query: 446 GLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+++G I+ + +KT ++ E E ++ + G+ GS +A
Sbjct: 561 AEIKQGKQIHARVIKTGHSFE--TEVGNALISLYGKCGSFEDA 601
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 200/460 (43%), Gaps = 81/460 (17%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
+ N LI Y K G A R+FE + +D V+W +M+ GY + G
Sbjct: 78 IVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG--------------- 122
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
E+ L+ M R G+ L+ + +C + + +G +H
Sbjct: 123 ----------------LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIH 166
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ GF +I +GN++IT+Y R G A +VF M RD V++N+LISG+ G E
Sbjct: 167 AQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGE 226
Query: 252 EAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL-------------------- 287
A +FE M D V+ ++++ +S G+L+K +L
Sbjct: 227 HALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLL 286
Query: 288 ---------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
FN + V W ++ F ++F F +M +RPNQ
Sbjct: 287 DLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQF 346
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T +L T ++ G QIH+ VK ESD+ + L+ +YSK G + A R+ +
Sbjct: 347 TYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
E+++VS+ SMI+G+ Q+ ++AL F++M+ G+ P+ I S +S C + + +G
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466
Query: 453 -----IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
IY +I + +V++ R G + EA
Sbjct: 467 QIHARIYVSGYSGDVSI------WNALVNLYARCGRIREA 500
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)
Query: 153 FDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
LF R + AC G R++ ++H G I+GN +I
Sbjct: 26 LSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLID 85
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTM 271
+Y + G + A +VF +S RD VSW +++SGY NG EEA L+ +M V +
Sbjct: 86 LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV 145
Query: 272 IT-------------------------GFSSK--------------GNLEKSIELFNMMP 292
++ GF S+ G+ + +F MP
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+D VT+ +ISG E A F EM + P+ +T+SS+L+A A+ L +G+Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H+++ K + SD ++ SL+ LY KCG+V A IF + D N+V +N M+ F Q
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIND 325
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKT 460
++ LF +M+ G+ PNQ T+ +L C ++ G I+ S+KT
Sbjct: 326 LAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 131/240 (54%), Gaps = 11/240 (4%)
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
R GK + +I +S G + + +F + +D+V+W A++SG+ N EEA
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
+ +M R V P LSSVLS+ QG IHA K S++ + N++++LY +
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG+ A R+F ++ R+ V++N++ISG AQ G GE AL +F +M+ GL P+ +T S+
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250
Query: 439 LSACNHVGLVEEG-----FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
L+AC +G +++G +++ + + Y +E ++D+ + G + A+ + NS
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIME------GSLLDLYVKCGDVETALVIFNS 304
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M + + ++GF+ +E + F + R+ L + L A Q
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 351 -SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
+IHA V + + N L+ LYSK G V+ A R+F + R+ VS+ +M+SG+AQ
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
NGLGEEAL L+R+M G+VP SVLS+C L +G
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG 162
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/659 (34%), Positives = 350/659 (53%), Gaps = 72/659 (10%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY------------------VNMPA 66
+A +F +P R+ VS+ A+ + +V M EA L+ +N+
Sbjct: 63 DARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCT 122
Query: 67 RWRDSVCSNALISGYL-KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
DSV I GYL K+G + D + ++VD Y K G + +A +F
Sbjct: 123 GLEDSV-QGRKIHGYLIKLG------------YDSDAFSANALVDMYAKVGILEDASSVF 169
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
D++ + ++V+W A++ G + + +L M + GM N TL+ +AC
Sbjct: 170 DEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRE 229
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G Q+H + + D LG +I MY + MD+A VF +M +RD ++WN++ISG+
Sbjct: 230 LGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHS 289
Query: 246 HNGEIEEAYRLFERM-------------------------------------PGKDFVSW 268
N E EEA LF M G +F ++
Sbjct: 290 QNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNY 349
Query: 269 T--TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
++I + G++E + +F P D V +T++++ + + Q EEA R ++EM +
Sbjct: 350 VVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRG 409
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
++P+ SS+L+A A+ + QG Q+H H++K SD+ NSLV++Y+KCG++ DA
Sbjct: 410 IKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDAS 469
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
F+ I R IVS+++MI G AQ+G G+EAL LF++M G+ PN IT +SVL ACNH G
Sbjct: 470 CAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAG 529
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
LV E YF SMK L+ IEP EHYACM+D+LGRAG L A++L+N M F+ VWGAL
Sbjct: 530 LVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGAL 589
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
LGA R H N+DL + AA+ L+ LEP+ + +V+L+++Y+ +G RVR K +++
Sbjct: 590 LGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVK 649
Query: 567 KSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLER 624
K PG SW+ +KDKV+ F+ G +S EI L +S K+ + P + L +ER
Sbjct: 650 KEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVER 708
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 221/461 (47%), Gaps = 55/461 (11%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ D S+V Y K G +AR +FD +P+++VV+W A+ Y+ D + LF
Sbjct: 42 DSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHD 101
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M G+ N +L+ + C +G ++HG + + G+D D N+++ MY ++G
Sbjct: 102 MVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGI 161
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----------------- 261
+++A+ VF ++K D VSWN++I+G V + A L M
Sbjct: 162 LEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKA 221
Query: 262 ----------------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
G D +I +S +++ + +F +MPE+D + W
Sbjct: 222 CAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAW 281
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
A+ISG NE+ EEA F M + + NQ TLS+VL + AA QIHA +K
Sbjct: 282 NAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLK 341
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
E D + NSL+ Y KCG+V DA R+F ++V + S+++ +AQ+G GEEAL L
Sbjct: 342 SGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRL 401
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---FIYFKSMKTLYNIEPGPEHYACMVD 476
+ +M+D G+ P+ S+L+AC + E+G ++ + +I G +V+
Sbjct: 402 YLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNS----LVN 457
Query: 477 ILGRAGSLAEAIDLINSMTFE--PPPGV--WGALLGAGRTH 513
+ + GS+ +A S F P G+ W A++G H
Sbjct: 458 MYAKCGSIEDA-----SCAFSRIPVRGIVSWSAMIGGLAQH 493
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 156/322 (48%), Gaps = 39/322 (12%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M G+ N + +AC G QVHG+V GFD D + NS++ +Y + G
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK--------- 263
+A +F + R VSWN+L S YVH+ EA LF M P +
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 264 ------------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
D S ++ ++ G LE + +F+ + + D V+W
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
AII+G V +E + A EM + + PN TLSS L A A A G Q+H+ ++K
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
M+M SD + L+ +YSKC ++ DA +F + ER+++++N++ISG +QN EEA +L
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300
Query: 420 FRKMKDEGLVPNQITFLSVLSA 441
F M EG+ NQ T +VL +
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKS 322
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 8/190 (4%)
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
++ N+ SVL A T L G Q+H VV +SD + NSLV LY+KCG DA
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+F I +R++VS+N++ S + + + EA++LF M G+ PN+ + S+++ C G
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCT--G 123
Query: 447 L---VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
L V+ I+ +K Y+ + + +VD+ + G L +A + + + +P W
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSAN--ALVDMYAKVGILEDASSVFDEIA-KPDIVSW 180
Query: 504 GALLGAGRTH 513
A++ H
Sbjct: 181 NAIIAGCVLH 190
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/624 (34%), Positives = 332/624 (53%), Gaps = 46/624 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--VNMPAR 67
NA+I AL S A +F M + V++ +I+G + G A +++ + +
Sbjct: 183 NALI-ALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEARE 123
D V +L++ VG ++ ++ +++ D + GS++D Y K G + A +
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
IF+ NVV W M+ Y ++ F++F M+ G+ N T + C +
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQ 361
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G Q+H L + GF+ D+ + +I MY + +D+A K+ M+ KRD VSW S+I+G
Sbjct: 362 IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAG 421
Query: 244 YVHNGEIEEAYRLFERMP---------------------------------------GKD 264
YV + EEA F+ M D
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAAD 481
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
W T++ ++ G E++ LF + KD++TW +ISGF + YE+A F++M +
Sbjct: 482 ISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQ 541
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ N T S +SA A A + QG Q+H VK S+ + N+L+SLY KCG++ D
Sbjct: 542 AGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIED 601
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A IF+ + RN VS+N++I+ +Q+G G EAL+LF +MK EGL PN +TF+ VL+AC+H
Sbjct: 602 AKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSH 661
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
VGLVEEG YFKSM +Y + P P+HYAC+VDILGRAG L A ++ M +W
Sbjct: 662 VGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWR 721
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LL A + H N+++ +LAA+HL+ELEP + YV+LS+ Y+V GK + ++VR K +
Sbjct: 722 TLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRG 781
Query: 565 IRKSPGCSWIILKDKVHLFLAGRK 588
IRK PG SWI +K+ VH F G +
Sbjct: 782 IRKEPGRSWIEVKNAVHAFFVGDR 805
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/580 (25%), Positives = 279/580 (48%), Gaps = 55/580 (9%)
Query: 12 MITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS 71
++ L N +++A ++F + R+ VS+ AM++G+ +RG+ EA LY M W
Sbjct: 83 LLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQM--HWTAV 140
Query: 72 VCSNALISGYLKV---GRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEARE 123
+ + ++S L G+ R+ A V K + +++ Y G A
Sbjct: 141 IPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAER 200
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F M + V + ++ G+ + E +F M+ G+ + +T+ L AC
Sbjct: 201 VFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
++G Q+H + + G +D I S++ +Y + G ++ A+ +F++ + + V WN ++
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVA 320
Query: 244 YVHNGEIEEAYRLFERM------PGK---------------------------------D 264
Y ++ +++ +F +M P K D
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESD 380
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+I +S L+K+ ++ M+ ++D V+WT++I+G+V ++ EEA F EM
Sbjct: 381 MYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD 440
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
V P+ + L+S SA A + QG QIHA V +D+SI N+LV+LY++CG +
Sbjct: 441 CGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEE 500
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A+ +F ID ++ +++N +ISGF Q+ L E+AL +F KM G N TF+S +SA +
Sbjct: 501 AFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALAN 560
Query: 445 VGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
+ +++G ++ +++KT + E E ++ + G+ GS+ +A + + M+ W
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSE--TEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-W 617
Query: 504 GALLGAGRTH-LNLDLAKLAAQHLME-LEPDSATPYVVLS 541
++ + H L+ L Q E L+P+ T VL+
Sbjct: 618 NTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLA 657
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 215/485 (44%), Gaps = 73/485 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D + N LI Y K G +A ++F+ + +D V+W +M+ GY ++G EA ++ +M
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMH 136
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
WTA++ L+ + AC + + +G
Sbjct: 137 ------WTAVIP-------------------------TPYVLSSVLSACTKGKLFAQGRM 165
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H V + F + +GN++I +Y G A +VF M D V++N+LISG+ G
Sbjct: 166 IHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGH 225
Query: 250 IEEAYRLFERM--------------------------PGK-------------DFVSWTT 270
E A ++F+ M GK D+++ +
Sbjct: 226 GECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
++ + G++E + ++FN+ + V W ++ + ++F F +M + PN
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ T +L T + G QIH+ +K ESD+ + L+ +YSK + A +I
Sbjct: 346 KFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILE 405
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+++R++VS+ SMI+G+ Q+ EEAL F++M+D G+ P+ I S SAC + + +
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQ 465
Query: 451 GF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G I+ + + Y + + +V++ R G EA L + + G + G
Sbjct: 466 GLQIHARVYVSGYAADISI--WNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGF 523
Query: 510 GRTHL 514
G++ L
Sbjct: 524 GQSRL 528
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 40/327 (12%)
Query: 165 AFNSITLTILFEAC-GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
A S LT +AC GR R+ +++H G D ++GN +I +Y + G + +A
Sbjct: 39 ALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQAR 98
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------PGK 263
+VF +S RD VSW +++SGY G +EA+RL+ +M GK
Sbjct: 99 QVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGK 158
Query: 264 DFVS-------------------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
F +I + G+ + + +F M D VT+ +IS
Sbjct: 159 LFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLIS 218
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G E A + F EM +RP+ +T++S+L+A A+ L +G Q+H++++K M
Sbjct: 219 GHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSF 278
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D + SL+ LY KCG++ A+ IF D N+V +N M+ + Q ++ +F +M+
Sbjct: 279 DYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQ 338
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEG 451
G+ PN+ T+ +L C G +E G
Sbjct: 339 ATGIHPNKFTYPCILRTCTCTGQIELG 365
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 125/239 (52%), Gaps = 11/239 (4%)
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
R G D + +I ++ G + ++ ++F + +D V+W A++SG+ +EAFR
Sbjct: 72 RGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRL 131
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
+ +M V P LSSVLSA QG IHA V K S+ + N+L++LY
Sbjct: 132 YSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLG 191
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
G+ A R+F ++ + V++N++ISG AQ G GE AL +F +M+ GL P+ +T S+
Sbjct: 192 FGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASL 251
Query: 439 LSACNHVGLVEEG-----FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
L+AC VG +++G ++ M Y E ++D+ + G + A D+ N
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMSFDYITE------GSLLDLYVKCGDIETAHDIFN 304
>gi|357138593|ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/587 (35%), Positives = 333/587 (56%), Gaps = 23/587 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R ++N MI+ L+ N + +A +F MP+RN VS+AA++TG+ R G EA EL
Sbjct: 69 MPERNVFTWNCMISGLVGNRM-LADARRVFDAMPVRNPVSWAALLTGYARCGRVAEAREL 127
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R + V NA++SGYL+ G E A +F+ M ++ V+W +M+ GY KK R+ E
Sbjct: 128 FDRMPDR--NVVSWNAMMSGYLRNGMVERARELFDMMPSRNDVSWLTMISGYIKKRRLRE 185
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
ARE+FD P A++ GY+ + C +D +LF M+R + ++ ++ R
Sbjct: 186 ARELFDLSPSHPTSVCNALLSGYVALSCLKDAEELFGRMQRR----DPVSWNVMITGYAR 241
Query: 181 FFRYREGVQVHGLVSRFGFD----YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
R + V++ FD D I +++ Y + G +D + KVF + RD V+
Sbjct: 242 AGRMQ--------VAQSLFDEMPQKDTISWTAVMRGYLQNGDVDASWKVFQDIPDRDVVA 293
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
WN+++ G+V + +++A RLF MP +D VSW T++ G +G++ + F MPEKD+
Sbjct: 294 WNTMMGGFVQSERLDDALRLFAEMPERDLVSWNTILQGHVQQGDMATANTWFRGMPEKDE 353
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+W +ISG + E A EM+R +RP++ TLS V+S A+ L G +H +
Sbjct: 354 TSWNTLISGHKD----EGALALLSEMIRGGLRPDEATLSVVISICASLVALGYGKMVHLY 409
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
VK E D + +SL+S+YSKCG + +A ++F + +R+ V++N+MI+ +A +G+ EA
Sbjct: 410 AVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMIATYAYHGMASEA 469
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L LF KM +G P+ TFLSVLSAC H G + EG YF+SM+ +N+ P +HY+CMVD
Sbjct: 470 LKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRSMQEDWNLTPRSDHYSCMVD 529
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+LGR G + +A D + + W L A H ++ L ++ A+ +++ P
Sbjct: 530 LLGRLGFIYQAYDFTRKIPSDLQINAWETLFSACNAHGDVQLGEVIAKDVLQARPSDGGM 589
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
Y +L+++Y+ VR K + ++K GCSW+ LK +V F
Sbjct: 590 YTLLANIYASKEMWSSAASVRGVMKEQGLKKETGCSWVELKGEVVSF 636
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 140/257 (54%), Gaps = 12/257 (4%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
DI N++IT + R G + A +VF M +R+ +WN +ISG V N + +A R+F+ MP
Sbjct: 42 DIFQWNAVITAHLRAGRVAAARRVFDEMPERNVFTWNCMISGLVGNRMLADARRVFDAMP 101
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
++ VSW ++TG++ G + ++ ELF+ MP+++ V+W A++SG++ N E A F
Sbjct: 102 VRNPVSWAALLTGYARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDM 161
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + N ++ +++S L + ++ ++ S+ N+L+S Y
Sbjct: 162 MPSR----NDVSWLTMISGYIKKRRLREAREL----FDLSPSHPTSVCNALLSGYVALSC 213
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ DA +F + R+ VS+N MI+G+A+ G + A +LF +M + + I++ +V+
Sbjct: 214 LKDAEELFGRMQRRDPVSWNVMITGYARAGRMQVAQSLFDEMPQK----DTISWTAVMRG 269
Query: 442 CNHVGLVEEGFIYFKSM 458
G V+ + F+ +
Sbjct: 270 YLQNGDVDASWKVFQDI 286
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/736 (31%), Positives = 361/736 (49%), Gaps = 140/736 (19%)
Query: 10 NAMITALINNNCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
N +I I CS E AF++F MP R+ VS+ AM+ G+ RG A++L+ MP R
Sbjct: 81 NCLIQMYIK--CSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPER- 137
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAM------------------------------- 97
D V N+LISGYL G + +F M
Sbjct: 138 -DVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQI 196
Query: 98 --------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
+ DVV +++D Y K ++ + + F MPEKN V+W+A++ G ++ D
Sbjct: 197 HGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL 256
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
G +LF M++ G+ + T +F +C R G Q+HG + F D+++G +
Sbjct: 257 RGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTAT 316
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY----------------------VHN 247
+ MY + + +A K+F+ + + S+N++I GY V
Sbjct: 317 LDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIK 376
Query: 248 GEIE----------------------------------EAYRLFERMPGKDFVSWTTMIT 273
G++E EA +FE M +D VSW +I
Sbjct: 377 GDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIA 436
Query: 274 GFSSKGNLEKSIELF-------------------------------------NMMPEKDD 296
GN EK++ LF + + E+
Sbjct: 437 AHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTV 496
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+W AIISGF +Q EEA + F +ML V P+ T +++L A T+ G QIHA
Sbjct: 497 VSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQ 556
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
++K ++SD I ++LV +YSKCGN+ D IF R+ V++N+M+ G+AQ+GLGEEA
Sbjct: 557 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEA 616
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L +F M+ E + PN TFL+VL AC H+GLVE+G YF SM + Y ++P EHY+C+VD
Sbjct: 617 LKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVD 676
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
I+GR+G +++A++LI M FE +W LL + H N+++A+ AA +++LEP+ +
Sbjct: 677 IMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAA 736
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
YV+LS++Y+ G + ++R + ++K PGCSWI +K +VH FL G K+ KEI
Sbjct: 737 YVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEI 796
Query: 597 EVTLQTISKGTKEFDW 612
L + T E W
Sbjct: 797 YENLDVL---TDEMKW 809
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 195/386 (50%), Gaps = 53/386 (13%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+N LI Y+K E A ++F+ M ++D V+W +M+ GY +G + A+++FD MPE++V
Sbjct: 80 TNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDV 139
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W +++ GY+ D+FL M R G F+ T ++ ++C + G+Q+HGL
Sbjct: 140 VSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGL 199
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ GFD D++ G++++ MY + +D + + F M +++ VSW+++I+G V N ++
Sbjct: 200 AVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGG 259
Query: 254 YRLFERMP---------------------------------------GKDFVSWTTMITG 274
LF+ M G D V T +
Sbjct: 260 LELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDM 319
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ NL + +LFN +P + ++ AII G+ ++ K + ++++L
Sbjct: 320 YMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD--------------KGLGLDEVSL 365
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S A A +G Q+H +K +S++ + N+++ +Y KCG +V+A +F +
Sbjct: 366 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 425
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLF 420
R+ VS+N++I+ QNG E+ L+LF
Sbjct: 426 RDAVSWNAIIAAHEQNGNEEKTLSLF 451
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 169/354 (47%), Gaps = 34/354 (9%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + +F+ C G Q H + F + + N +I MY + ++ A KVF M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
+RD VSWN+++ GY G+I A +LF+ MP +D VSW ++I+G+ G+ K I++
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV-- 161
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
F++M R ++ T + VL + ++
Sbjct: 162 -----------------------------FLQMGRMGTVFDRTTFAVVLKSCSSLEDHGG 192
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G QIH VKM + DV ++L+ +Y+KC + + + F ++ E+N VS++++I+G Q
Sbjct: 193 GIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQ 252
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGP 468
N L LF++M+ G+ +Q TF SV +C + + G ++ ++KT + +
Sbjct: 253 NDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVI 312
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
+D+ + +L++A L NS+ ++G R+ L L +++
Sbjct: 313 G--TATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVS 364
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/566 (36%), Positives = 329/566 (58%), Gaps = 33/566 (5%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV 102
+I + G +A +L+ P DSV N++++GY+K G EEA IF+ M ++++
Sbjct: 181 TLINMYAVCGNMRDARKLFDESPVL--DSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNI 238
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
VA SM+ K G+V+EA ++F++M EK++V+W+A++ GY + +E+ +F+ M
Sbjct: 239 VASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNAN 298
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
GM + + + + AC + G +HGLV R G + + L N++I MY
Sbjct: 299 GMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMY--------- 349
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
SG +GEI +A +LF D +SW +MI+G G++E
Sbjct: 350 -------------------SG---SGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVE 387
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
K+ LF++MPEKD V+W+A+ISG+ ++ + E F EM +RP++ L SV+SA
Sbjct: 388 KARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACT 447
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
A L+QG +HA++ K ++ +V + +L+ +Y KCG V +A +F ++E+ + S+N+
Sbjct: 448 HLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNA 507
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
+I G A NGL E +L++F +MK+ G++PN+ITF+ VL AC H+GLV+EG +F SM +
Sbjct: 508 LIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKH 567
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
IEP +HY CMVD+LGRAG L EA LI SM P WGALLGA + H + ++ +
Sbjct: 568 GIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERV 627
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
+ L+EL+PD +V+LS++++ G D VR K + + K+PGCS I VH
Sbjct: 628 GRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHE 687
Query: 583 FLAGRKSCLDLKEIEVTLQTISKGTK 608
FLAG K+ + ++E L ++K K
Sbjct: 688 FLAGDKTHPWINKVEGMLNEMAKRLK 713
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 226/419 (53%), Gaps = 39/419 (9%)
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+IFD++ N W M+ Y++ + E L+ M + + ++ T ++ +AC
Sbjct: 96 QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 155
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G ++H V + GFD D+ + N++I MY G M +A K+F D+VSWNS+++
Sbjct: 156 LEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILA 215
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
GYV G++EEA +F++MP ++ V+ +MI G + ++ +LFN M EKD V+W+A+
Sbjct: 216 GYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSAL 275
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
ISG+ N YEEA FIEM +R +++ + SVLSA A + + G IH V++M +
Sbjct: 276 ISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGI 335
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFT---NID-------------------------- 393
ES V++QN+L+ +YS G ++DA ++F N+D
Sbjct: 336 ESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDV 395
Query: 394 --ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
E++IVS++++ISG+AQ+ E L LF +M+ + P++ +SV+SAC H+ +++G
Sbjct: 396 MPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQG 455
Query: 452 ---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
Y + N+ G ++D+ + G + A+++ N M E W AL+
Sbjct: 456 KWVHAYIRKNGLKVNVILG----TTLLDMYMKCGCVENALEVFNGME-EKGVSSWNALI 509
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 131/282 (46%), Gaps = 69/282 (24%)
Query: 239 SLISGYVHNGE-IEEAYRLFERMPGKDFVSWT---TMITGFSSKG---NLEKSIELFNMM 291
S++ ++HN +++ R+ +M F+S T + + FS+ L+ S+++F+ +
Sbjct: 42 SILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRI 101
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ W ++ ++ + E+A + M++ +V P+ T V+ A A G
Sbjct: 102 ENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGK 161
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR------------------------ 387
+IH HV+K+ +SDV +QN+L+++Y+ CGN+ DA +
Sbjct: 162 EIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKG 221
Query: 388 -------IFTNIDERNIVSYNSM-------------------------------ISGFAQ 409
IF + +RNIV+ NSM ISG+ Q
Sbjct: 222 DVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQ 281
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
NG+ EEAL +F +M G+ +++ +SVLSAC H+ +V+ G
Sbjct: 282 NGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG 323
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/618 (35%), Positives = 331/618 (53%), Gaps = 55/618 (8%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGYLKVGRCEE 89
RN VS+ +++ +V+ A +++ M P + S NA R E
Sbjct: 165 RNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGS-----RDLE 219
Query: 90 AARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
A R AMV +KDV ++VD Y K G + A +F K+PE +VV+W A + G +
Sbjct: 220 AGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCV 279
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
+ +L L M+ G+ N TL+ + +AC + G Q+HG + + D D
Sbjct: 280 LHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNY 339
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
+ ++ MY + G +D+A KVF + +RD V WN+LISG H + EA LF RM +
Sbjct: 340 IAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEG 399
Query: 265 F-VSWTTMITGFSSKGNLEK--------------------------------------SI 285
F V+ TT+ S +LE +
Sbjct: 400 FDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAY 459
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+F D + +T++I+ + E+A + F+EMLRK + P+ LSS+L+A A+ +
Sbjct: 460 RVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLS 519
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
QG Q+HAH++K SDV N+LV Y+KCG++ DA F+ + E+ +VS+++MI
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIG 579
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G AQ+G G+ AL++F +M DE + PN IT SVL ACNH GLV+E YF SMK ++ IE
Sbjct: 580 GLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIE 639
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
EHYACM+D+LGRAG L +A++L+NSM F+ VWGALL A R H + +L +LAA+
Sbjct: 640 RTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEK 699
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
L LEP+ + +V+L++ Y+ G D +VR K +++K P SW+ LKDKVH F+
Sbjct: 700 LFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIV 759
Query: 586 GRKSCLDLKEIEVTLQTI 603
G KS ++I L +
Sbjct: 760 GDKSHPRARDIYAKLDEL 777
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 241/536 (44%), Gaps = 55/536 (10%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F +P VS+++++T + M +A + +M R C+ ++ LK
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSM--RSCSVRCNEFVLPVVLKCA 113
Query: 86 RCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAWTAM 139
A+ + D+ ++V Y G V EAR +FD+ E+N V+W +
Sbjct: 114 PDAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGL 173
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ Y+K D +F M GG+ N + + AC G +VH +V R G+
Sbjct: 174 MSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGY 233
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D D+ N+++ MY +LG + A VF + + D VSWN+ ISG V +G + A L +
Sbjct: 234 DKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQ 293
Query: 260 MPGKDFV-------------------SWTTMITGFSSKGN-------------------- 280
M V + I GF K N
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGL 353
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
L+ + ++F+ +P++D V W A+ISG + Q+ EA F M ++ N+ TL++VL +
Sbjct: 354 LDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+A+ ++ Q+HA K+ SD + N L+ Y KC + AYR+F +I+++
Sbjct: 414 TASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAF 473
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---FIYFKS 457
SMI+ +Q GE+A+ LF +M +GL P+ S+L+AC + E+G +
Sbjct: 474 TSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+ + ++ G +V + GS+ +A DL S E W A++G H
Sbjct: 534 RQFMSDVFAGNA----LVYTYAKCGSIEDA-DLAFSGLPEKGVVSWSAMIGGLAQH 584
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 195/447 (43%), Gaps = 74/447 (16%)
Query: 35 MRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIF 94
MR+ + ++T + + ++ ++ +V N L+S Y K A R+F
Sbjct: 1 MRSLETIGPLLTRYAATQSLLQGAHIHAHLLKSGLFAVFRNHLLSFYSKCRLPGSARRVF 60
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
+ + + V+W S+V Y + MP D
Sbjct: 61 DEIPDPCHVSWSSLVTAYSN-----------NAMP--------------------RDALG 89
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
F SMR + N L ++ + C + G Q+H L G DI + N+++ MYG
Sbjct: 90 AFRSMRSCSVRCNEFVLPVVLK-CAPDAGF--GTQLHALAMATGLGGDIFVANALVAMYG 146
Query: 215 RLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG----- 262
GF+DEA VF +R+ VSWN L+S YV N A ++F M P
Sbjct: 147 GFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFS 206
Query: 263 ----------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
KD + ++ +S G++ + +F +PE
Sbjct: 207 CVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPET 266
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D V+W A ISG V + + A ++M + PN TLSS+L A A + N G QIH
Sbjct: 267 DVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIH 326
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+VK N +SD I LV +Y+K G + DA ++F I +R++V +N++ISG +
Sbjct: 327 GFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHA 386
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSA 441
EAL+LF +M+ EG N+ T +VL +
Sbjct: 387 EALSLFCRMRKEGFDVNRTTLAAVLKS 413
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 14/281 (4%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+A ++F +P R+ V + A+I+G EA L+ M D + ++ LK
Sbjct: 356 DAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFD--VNRTTLAAVLKS 413
Query: 85 GRCEEA---ARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
EA R A+ EK D ++D Y K + A +F+K +++A+
Sbjct: 414 TASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAF 473
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
T+M+ + D ED LF+ M R G+ + L+ L AC Y +G QVH + +
Sbjct: 474 TSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
F D+ GN+++ Y + G +++A+ FS + ++ VSW+++I G +G + A +
Sbjct: 534 RQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDV 593
Query: 257 FERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
F RM + + ++ T+++ + G ++++ FN M E
Sbjct: 594 FHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T+ +L+ AAT +L QG+ IHAH++K + + +N L+S YSKC A R+F I
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+ VS++S+++ ++ N + +AL FR M+ + N+ VL G
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF 118
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/667 (32%), Positives = 354/667 (53%), Gaps = 59/667 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------S 71
S+ EA ++F ++ VS+ MI+G+ RG+ EA L+ M + S
Sbjct: 78 SVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILS 137
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
CS+ + L GR E R+ EA + D +++ Y K G V +AR +FD M +
Sbjct: 138 ACSSPAV---LNWGR-EIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+ V+WT + Y + E+ + +M + + + IT + ACG +G Q+H
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ + D+ + ++ MY + G +A +VF +S RD ++WN++I G+V +G++E
Sbjct: 254 AHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLE 313
Query: 252 EAYRLFERM----PGKDFVSWTTMITG--------------------------------- 274
EA+ F RM D ++TT+++
Sbjct: 314 EAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALI 373
Query: 275 --FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
+S G+++ + ++F+ MP++D V+WT ++ + + +Q E+F F +ML++ V+ N++
Sbjct: 374 NMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKI 433
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T VL A + L G +IHA VVK + +D+++ N+L+S+Y KCG+V DA R+F +
Sbjct: 434 TYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGM 493
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
R++V++N++I G QNG G EAL + MK EG+ PN TF++VLSAC LVEEG
Sbjct: 494 SMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGR 553
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
F M Y I P +HYACMVDIL RAG L EA D+I ++ +P +WGALL A R
Sbjct: 554 RQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRI 613
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H N+++ + AA+H ++LEP +A YV LS +Y+ G RD ++R K + ++K PG S
Sbjct: 614 HCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRS 673
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPK------HDWSLLGLERDW 626
WI + +VH F+A +S +EI L+T+ K K + HD G ER
Sbjct: 674 WIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAV 733
Query: 627 SYTADNI 633
+ ++ +
Sbjct: 734 CHHSEKL 740
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/494 (27%), Positives = 237/494 (47%), Gaps = 51/494 (10%)
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
I V+ +V +++ Y G V EAR++FDK K+VV+W M+ GY ++
Sbjct: 54 ILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEA 113
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
F+LF M++ + + T + AC G ++H V G D +GN++I+M
Sbjct: 114 FNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISM 173
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFV 266
Y + G + +A +VF M+ RD VSW +L Y +G EE+ + + M P + +
Sbjct: 174 YAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSR--I 231
Query: 267 SWTTMITGFSSKGNLEK-----------------------------------SIELFNMM 291
++ +++ S LEK + E+F +
Sbjct: 232 TYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECL 291
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+D + W +I GFV++ Q EEA F ML + V P++ T ++VLSA A L +G
Sbjct: 292 SYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGK 351
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
+IHA K + SDV N+L+++YSK G++ DA ++F + +R++VS+ +++ +A
Sbjct: 352 EIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCD 411
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSAC-NHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
E+ F++M +G+ N+IT++ VL AC N V L I+ + +K + +
Sbjct: 412 QVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTN 471
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE 530
++ + + GS+ +AI + M+ W L+G G L L +M+ E
Sbjct: 472 --ALMSMYFKCGSVEDAIRVFEGMSMRDVV-TWNTLIG-GLGQNGRGLEALQRYEVMKSE 527
Query: 531 ---PDSATPYVVLS 541
P++AT VLS
Sbjct: 528 GMRPNAATFVNVLS 541
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 202/399 (50%), Gaps = 51/399 (12%)
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
D+ + R G +S L ++C + G QVH + R G ++ + N+++ +Y
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK-DFV 266
G ++EA ++F S + VSWN +ISGY H G +EA+ LF M P K FV
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 267 S------------W--------------------TTMITGFSSKGNLEKSIELFNMMPEK 294
S W +I+ ++ G++ + +F+ M +
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR 193
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D+V+WT + + + EE+ + + ML++ VRP+++T +VLSA + A L +G QIH
Sbjct: 194 DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
AH+V+ SDV + +L +Y KCG DA +F + R+++++N+MI GF +G E
Sbjct: 254 AHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLE 313
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT--LYNIEPGPEHY 471
EA F +M +EG+ P++ T+ +VLSAC G + G I+ ++ K + ++ G
Sbjct: 314 EAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGN--- 370
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLG 508
++++ +AGS+ +A + + M P V W LLG
Sbjct: 371 -ALINMYSKAGSMKDARQVFDRM---PKRDVVSWTTLLG 405
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/509 (38%), Positives = 303/509 (59%), Gaps = 57/509 (11%)
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
++GY + R EA ++F+ M E + ++W +V GY + G + EAR++FDKMPE+NVV+WT
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
AM+ GY++ E+ LF M N ++ T++ GL+
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPER----NVVSWTVML---------------GGLIED- 100
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G +DEA ++F MM +D V+ ++I G G + EA +F
Sbjct: 101 -------------------GRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIF 141
Query: 258 ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
+ MP ++ V+WT+MI+G EKDD TW+ +I + EA
Sbjct: 142 DEMPQRNVVAWTSMISG------------------EKDDGTWSTMIKIYERKGFELEALA 183
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F M R+ VRP+ ++ SVLS + A+L+ G Q+H+ +V+ + D+ + + L+++Y
Sbjct: 184 LFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYI 243
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
KCG++V A R+F ++IV +NS+I+G+AQ+G GE+AL +F M + P++ITF+
Sbjct: 244 KCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIG 303
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
VLSAC++ G V+EG F+SMK+ Y ++P EHYACMVD+LGRAG L EA++LI +M E
Sbjct: 304 VLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVE 363
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
VWGALLGA RTH NLDLA++AA+ L++LEP++A PY++LS+LYS + +D +R
Sbjct: 364 ADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELR 423
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ K +RKSPGCSWI + KVH+F G
Sbjct: 424 KTMRAKNLRKSPGCSWIEVDKKVHIFSGG 452
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 178/314 (56%), Gaps = 20/314 (6%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + + S+N +++ + N I EA ++F MP RN VS+ AMI G+V+ G+ EAE L
Sbjct: 20 MPETNTISWNGLVSGYVQNGM-ISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELL 78
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R + V ++ G ++ GR +EA ++F+ M KDVVA +M+DG C +GR+IE
Sbjct: 79 FWRMPER--NVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIE 136
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMK-------VDCFE-DGFD-----LFLSMRRGGMAFN 167
AREIFD+MP++NVVAWT+M+ G + +E GF+ LF M+R G+ +
Sbjct: 137 AREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPS 196
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
++ + CG G QVH + R FD DI + + +ITMY + G + A +VF
Sbjct: 197 FPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFD 256
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEK 283
S +D V WNS+I+GY +G E+A +F M D +++ +++ S G +++
Sbjct: 257 RFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKE 316
Query: 284 SIELFNMMPEKDDV 297
+E+F M K V
Sbjct: 317 GLEIFESMKSKYQV 330
>gi|147859671|emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]
Length = 833
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/593 (35%), Positives = 326/593 (54%), Gaps = 59/593 (9%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R SYN MI L+ I A EIF MP R+ VS+ +MI+G+V G+ EA +
Sbjct: 252 MPERDIFSYNTMIAGLMKFG-DINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRV 310
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ M + D V N +I+G + VG+ + A F+ M +D+ +W +M+ G GR++E
Sbjct: 311 FSGMVLK--DVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVE 368
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +F+ MP ++V AW M+ GY++ C E G LF M + R
Sbjct: 369 ARGLFEDMPVRDVRAWNTMIAGYLENGCIEIGEVLFQKMPQ------------------R 410
Query: 181 FFR-YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
FR + E ++GLV R + A ++F M ++ SWNS
Sbjct: 411 DFRSWNE--MINGLV--------------------RNQRIQNAMRLFVEMPQKCRRSWNS 448
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
++ G + NG I+EA+ E+ P D VSWT +I G+ G ++ ++ +F +MP +D W
Sbjct: 449 IVFGLIRNGLIKEAHAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDATAW 508
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
II G N+ EE ++F++M P++ T +SVL+ + TL+ G QIHA V K
Sbjct: 509 NVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTK 568
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
V++ N++V+LY++CGN A +F+++ +++S+NS+I G A NG G EA+ +
Sbjct: 569 TGFNYFVAVSNAMVTLYARCGNSNSALLLFSSMTSHDVISWNSIICGLAHNGNGVEAIEM 628
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F KM+ + PN+ITF+ VLSAC+H GLV++G YF MK +EP EHY C+VD+LG
Sbjct: 629 FEKMRSTDIKPNRITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLG 688
Query: 480 RAGSLAEAIDLINSMT---FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
R G + EA+ + M E P VWGA+LGA R H N+ + ++A + ++E+EP
Sbjct: 689 RFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNIQVGEIAGERILEIEP----- 743
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
++ GK+ D RV ++ + K ++K P CSW+ + H+FL+G S
Sbjct: 744 -------HNFCGKREDAERVWVRMREKGVKKQPACSWMEVNGSGHVFLSGDSS 789
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 210/434 (48%), Gaps = 43/434 (9%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+ IS ++ G EEA +F+ M +++ V + +M+ GY + G E +FD+MPE+++
Sbjct: 199 NSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDIF 258
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNS-ITLTILFEACGRFFRYREGVQVHG 192
++ M+ G MK ++F M R +++NS I+ + G R G+ +
Sbjct: 259 SYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVLK- 317
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
D++ N +I +G +D A + F M RD SW ++ISG G I E
Sbjct: 318 ---------DVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVE 368
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A LFE MP +D +W TMI G+ G +E LF MP++D +W +I+G V N++
Sbjct: 369 ARGLFEDMPVRDVRAWNTMIAGYLENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRI 428
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
+ A R F+EM +K R + +S++ + + HA + K VS N +
Sbjct: 429 QNAMRLFVEMPQKCRR----SWNSIVFGLIRNGLIKEA---HAFLEKSPFSDTVSWTNLI 481
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V Y + G V A IF + R+ ++N +I G +N GEE L F KMK+ G P++
Sbjct: 482 VG-YFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDE 540
Query: 433 ITFLSVLSACN-----------HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
TF SVL+ C+ H + + GF YF ++ MV + R
Sbjct: 541 ATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSN------------AMVTLYARC 588
Query: 482 GSLAEAIDLINSMT 495
G+ A+ L +SMT
Sbjct: 589 GNSNSALLLFSSMT 602
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/582 (34%), Positives = 334/582 (57%), Gaps = 41/582 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+++A ++F P R+ VS+ A+++ + RRGM +A L+ AR R+ V AL+SGY
Sbjct: 56 VWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDAR-RNVVTWTALLSGYA 114
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ G +EA +F+ M +++VV+W +M++ Y GR +A +FD+MP ++ +W ++
Sbjct: 115 RAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAM 174
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
++ + +LF M + D
Sbjct: 175 LVRSGSVDKARELFGRMP---------------------------------------ERD 195
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
++ +++ R G +DEA +F M +R+ VSWN++ISGY N ++EA LF +MP
Sbjct: 196 VMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKMPH 255
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
+D S MITGF +L+++ +LF+ MPE++ VTWT +++G++ +Q E + F M
Sbjct: 256 RDIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGM 315
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L +RPNQ+T L A + ATL +G Q+H + K + D + ++L+++Y+KCG V
Sbjct: 316 LMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEV 375
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A ++F E++++S+N +I+ +A +G+G EA++L+ KM+ G PN +T++ +LSAC
Sbjct: 376 GLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSAC 435
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG- 501
+H GLV+EG F+SM +I EHY C++D+ RAG L +A LI+ + +P G
Sbjct: 436 SHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGS 495
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VW ALLG H N + LAA++L++ EPD+A Y +LS++Y+ GK ++ +R +
Sbjct: 496 VWSALLGGCNAHGNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMN 555
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ ++K PGCSWI + +KVH+F+A KS + I LQ I
Sbjct: 556 NRGLKKQPGCSWIEVANKVHVFVARDKSHSESDLIYGLLQNI 597
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 165/295 (55%), Gaps = 7/295 (2%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N ++ L+ + S+ +A E+F MP R+ +++ M+ G R G EA L
Sbjct: 160 MPVRDAGSWNILLAMLVRSG-SVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLL 218
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ +MP R+ V NA+ISGY + R +EA +F M +D+ + M+ G+ + +
Sbjct: 219 FDSMPE--RNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKR 276
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD+MPE+NVV WT M++GY+K E LF M G+ N +T +AC
Sbjct: 277 ARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSD 336
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
EG QVH ++ + F D +G++++ +Y + G + A K+F + ++D +SWN +
Sbjct: 337 LATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGI 396
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
I+ Y H+G EA L+E+M G + V++ +++ S G +++ +++F M
Sbjct: 397 IAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESM 451
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 193/434 (44%), Gaps = 91/434 (20%)
Query: 3 DRTSASYNAMI-TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAE 58
DR+ A N + TAL++ + EA +F MP RN VS+ M+ + G +A
Sbjct: 95 DRSDARRNVVTWTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDAC 154
Query: 59 ELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
L+ MP RD+ N L++ ++ G ++A +F M E+DV+AW +MVDG + G V
Sbjct: 155 ALFDRMPV--RDAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNV 212
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EAR +FD MPE+NVV+W AM+ GY + ++ DLF M
Sbjct: 213 DEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKMPH----------------- 255
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
DI N +IT + + + A K+F M +R+ V+W
Sbjct: 256 ----------------------RDIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWT 293
Query: 239 SLISGYVHNGEIEEAYRLFERM--------------------------PGK--------- 263
++++GY+ + E + LF M GK
Sbjct: 294 TMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKT 353
Query: 264 ----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
D + ++ ++ G + + +LF++ EKD ++W II+ + ++ EA +
Sbjct: 354 AFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLY 413
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS----LVSL 375
+M RPN +T +LSA + + +++G +I +V + +++++ L+ L
Sbjct: 414 EKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVN---DRSIAVRDEHYTCLIDL 470
Query: 376 YSKCGNVVDAYRIF 389
S+ G + DA R+
Sbjct: 471 CSRAGRLDDAKRLI 484
>gi|356532382|ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 669
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/605 (34%), Positives = 335/605 (55%), Gaps = 52/605 (8%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R SYN+MI + N + EA +F MP RN V+ +AMI G+ + G +A ++
Sbjct: 91 MPQRDDVSYNSMIAVYLKNK-DLLEAETVFKEMPQRNVVAESAMIDGYAKVGRLDDARKV 149
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ NM R ++ +LISGY G+ EEA +F+ M E++VV+W +V G+ + G +
Sbjct: 150 FDNMTQR--NAFSWTSLISGYFSCGKIEEALHLFDQMPERNVVSWTMVVLGFARNGLMDH 207
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A F MPEKN++AWTAMV Y+ CF + + LFL M N + I+ C R
Sbjct: 208 AGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEMPER----NVRSWNIMISGCLR 263
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
R +DEA +F M R+ VSW ++
Sbjct: 264 ANR-----------------------------------VDEAIGLFESMPDRNHVSWTAM 288
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+SG N I A + F+ MP KD +WT MIT +G ++++ +LF+ +PEK+ +W
Sbjct: 289 VSGLAQNKMIGIARKYFDLMPYKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGSWN 348
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+I G+ N EA F+ MLR RPN+ T++SV+++ L Q HA V+ +
Sbjct: 349 TMIDGYARNSYVGEALNLFVLMLRSCFRPNETTMTSVVTSCDGMVELMQA---HAMVIHL 405
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
E + + N+L++LYSK G++ A +F + +++VS+ +MI ++ +G G AL +F
Sbjct: 406 GFEHNTWLTNALITLYSKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVF 465
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M G+ P+++TF+ +LSAC+HVGLV +G F S+K YN+ P EHY+C+VDILGR
Sbjct: 466 ARMLVSGIKPDEVTFVGLLSACSHVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVDILGR 525
Query: 481 AGSLAEAIDLINSMTFEPPP----GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
AG + EA+D++ ++ PP V ALLGA R H ++ +A + L+ELEP S+
Sbjct: 526 AGLVDEAMDVVATI---PPSARDEAVLVALLGACRLHGDVAIANSIGEKLLELEPSSSGG 582
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
YV+L++ Y+ G+ + +VR + + + +++ PG S I + K H+F+ G +S ++EI
Sbjct: 583 YVLLANTYAAEGQWDEFAKVRKRMRERNVKRIPGYSQIQITGKNHVFVVGERSHPQIEEI 642
Query: 597 EVTLQ 601
LQ
Sbjct: 643 YRLLQ 647
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/553 (35%), Positives = 324/553 (58%), Gaps = 11/553 (1%)
Query: 52 GMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFE-AMVEKDVVAWGSMVD 110
G +A L+ P R D V AL++ Y G +A +F+ ++VV W +++
Sbjct: 49 GRVSDARRLFDRTPDR--DVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALLS 106
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
GY + GRV EA +F +MPE+NVV+W M++ Y D LF M +I
Sbjct: 107 GYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNIL 166
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L L + G + R+ L R + +++ +++ R G ++EA +F M
Sbjct: 167 LAALVRS-GNIDKARK------LFDRMP-ERNVMAWTTMVAGIARSGSVNEARALFDGMP 218
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
+R+ VSWN++ISGY N I+EA+ LF +MP +D SW MITGF NLE++ ELF+
Sbjct: 219 ERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDK 278
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP ++ VTWT +++G++ + Q E A + F ML +RPNQ+T + A + A L++G
Sbjct: 279 MPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEG 338
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q+H + K + D I+++L++LY+KCG ++ A ++F E++++S+N MI+ +A +
Sbjct: 339 QQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHH 398
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
G+G EA++L+ KM++ G PN +T++ +LSAC+H GLV+EG F+ M +I EH
Sbjct: 399 GVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEH 458
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE 530
Y C++D+ RAG L +A LI+ + EP VW ALLG +H N + LAA++L+E E
Sbjct: 459 YTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAE 518
Query: 531 PDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSC 590
P++A Y +L ++Y+ GK ++ ++R + + ++K PGCSWI + +KVH+F++ KS
Sbjct: 519 PNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVHVFVSRDKSH 578
Query: 591 LDLKEIEVTLQTI 603
+ I LQ I
Sbjct: 579 SESDLINSLLQDI 591
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 163/295 (55%), Gaps = 7/295 (2%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N ++ AL+ + +I +A ++F MP RN +++ M+ G R G EA L
Sbjct: 155 MPVRDAGSWNILLAALVRSG-NIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARAL 213
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ V NA+ISGY + +EA +F M +D+ +W M+ G+ + +
Sbjct: 214 FDGMPE--RNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLER 271
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+E+FDKMP +NVV WT M++GY++ E LF M G+ N +T +AC
Sbjct: 272 AQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSN 331
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
EG QVH ++ + F +D + ++++ +Y + G + A KVF++ ++D +SWN +
Sbjct: 332 LAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGM 391
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
I+ Y H+G EA L+E+M + V++ +++ S G +++ + +F M
Sbjct: 392 IAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYM 446
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 217/484 (44%), Gaps = 119/484 (24%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATM-PMRNAVSYAAMITGFVRRGMFYEAEELY 61
DR S+ A++ A +++A +F RN V++ A+++G+ R G EAE L+
Sbjct: 63 DRDVVSWTALVAAYACQGM-LHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALF 121
Query: 62 VNMPAR----W-------------------------RDSVCSNALISGYLKVGRCEEAAR 92
MP R W RD+ N L++ ++ G ++A +
Sbjct: 122 GRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARK 181
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
+F+ M E++V+AW +MV G + G V EAR +FD MPE+NVV+W AM+ GY + ++
Sbjct: 182 LFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMISGYARNHMIDEA 241
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
DLF+ M DI N +IT
Sbjct: 242 HDLFMKMP---------------------------------------TRDIASWNIMITG 262
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK--- 263
+ + ++ A ++F M +R+ V+W ++++GY+ + + E A +LF M P +
Sbjct: 263 FIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTF 322
Query: 264 ------------------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
D +T++ ++ G + + ++FN+ E
Sbjct: 323 LGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKE 382
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
KD ++W +I+ + ++ EA + +M +PN +T +LSA + + +++G +I
Sbjct: 383 KDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRI 442
Query: 354 HAHVVKMNMESDVSIQNS----LVSLYSKCGNVVDAYRI--FTNIDERNIVSYNSMISGF 407
++VK + +++++ L+ L S+ G + DA R+ F ++ + V +N+++ G
Sbjct: 443 FEYMVK---DRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTV-WNALLGGC 498
Query: 408 AQNG 411
+G
Sbjct: 499 NSHG 502
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+++ + V N V+ + G V DA R+F +R++VS+ ++++ +A G+ +A L
Sbjct: 29 VDVSNHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARAL 88
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F + N +T+ ++LS G V+E F M E + M++
Sbjct: 89 FDRPDAR---RNVVTWTALLSGYARAGRVDEAEALFGRMP-----ERNVVSWNTMLEAYT 140
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
+G + +A L N M G W LL A N+D A+
Sbjct: 141 SSGRVGDACTLFNGMPVR-DAGSWNILLAALVRSGNIDKAR 180
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/573 (36%), Positives = 341/573 (59%), Gaps = 16/573 (2%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP + VSY AMIT +++ +AE+L+ MP R V +A+I GY K G
Sbjct: 88 ARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPDR--TIVAESAMIDGYAKAG 145
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
+ A ++F+AM++ +V +W S++ GY + G+V +A ++FD+MP KNVV+WT MV GY +
Sbjct: 146 LMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYAR 205
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV-HGLVSRFGFDYDII 204
+ +F M N+I+ T + ++ R E +++ H + R + ++ +
Sbjct: 206 NGLIDQARSVFNQMPEK----NTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTM 261
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
+ + G+ ++EA K+F +M R+AVSW ++SG NG + A F++MP KD
Sbjct: 262 ISG---CLDGKR--VNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKD 316
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+W MIT + + + ++ ELFN+M E++ VTW A+I G+ + EA + I MLR
Sbjct: 317 IAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLR 376
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+RPN+ T++ +L++ L Q HA + + E + S+ N+L+++YS+ G++
Sbjct: 377 SCIRPNETTMTIILTSCWGMLELMQA---HALAIVVGCECETSLSNALITMYSRIGDISS 433
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
+ F ++ +++VS+ +M+ F +G G+ AL++F M G P++ITF+ VLSAC+H
Sbjct: 434 SRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSH 493
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT-FEPPPGVW 503
GLV++G F SM Y +EP EHY+C+VDILGRAG + EA+D++ M E V
Sbjct: 494 AGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDGAVL 553
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
GALLGA R H N+++A Q L+EL+P+S+ YV+L+++++ G + VR K K +
Sbjct: 554 GALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAEVRKKMKDR 613
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
+RK PG S I +K K H F AG KS ++EI
Sbjct: 614 NVRKVPGFSQIEVKGKCHAFFAGDKSHPQVEEI 646
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 172/354 (48%), Gaps = 32/354 (9%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
DI N I+ GR G + A K+F M D VS+ ++I+ Y+ N E+ +A +LF+ MP
Sbjct: 68 DIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTMP 127
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+ V+ + MI G++ G ++ + ++F+ M + + +WT++ISG+ + Q +A + F +
Sbjct: 128 DRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQ 187
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M K+V ++ ++++ A ++Q + + + N S ++ S Y G
Sbjct: 188 MPAKNV----VSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKS----YVDNGR 239
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+A ++F + +RN+ S+N+MISG EA LF M + N +++ ++S
Sbjct: 240 TDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMP----LRNAVSWTIMVS- 294
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA--CMVDILGRAGSLAEAIDLINSMTFEPP 499
GL GF K + ++ P + A M+ + EA +L N MT E
Sbjct: 295 ----GLARNGFT--KLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMT-ERN 347
Query: 500 PGVWGALL-GAGRTHLNLDLAKLAAQHLMEL-----EPDSATPYVVLSDLYSVI 547
W A++ G R + + A +HL+ + P+ T ++L+ + ++
Sbjct: 348 IVTWNAMIDGYARHRPDGE----AMKHLILMLRSCIRPNETTMTIILTSCWGML 397
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 228/689 (33%), Positives = 356/689 (51%), Gaps = 89/689 (12%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M DR S+N MI A N+ + EA ++F P+R+ ++++++I+G+ R G EA EL
Sbjct: 67 MPDRDECSWNTMIGAYANSG-RLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALEL 125
Query: 61 YVNMPAR--------WRD--SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
+ M W VCS ++ L+ G+ + A + + + +VD
Sbjct: 126 FWEMQYEGERPNQFTWGSVLRVCSMYVL---LEKGK-QIHAHAIKTQFDSNAFVVTGLVD 181
Query: 111 GYCKKGRVIEAREIFDKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI 169
Y K ++EA +F+ P+K N V WTAMV GY + + F MR G+ N
Sbjct: 182 MYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQF 241
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + ACG G QVHG + R GF ++ +G++++ MY + G + A ++ M
Sbjct: 242 TFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETM 301
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFS--------- 276
D VSWNS+I G V G EEA LF M + D ++ +++ FS
Sbjct: 302 EVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAM 361
Query: 277 --------------------------SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+G + + ++F M +KD ++WT++++G V+N
Sbjct: 362 SVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNG 421
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
YEEA R F EM + P+Q+ +++VLSA A L G Q+HA+ +K + S +S+ N
Sbjct: 422 SYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN 481
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SLVS+Y+KCG + DA ++F +++ ++++++ ++I G+AQNG G +
Sbjct: 482 SLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD--------------- 526
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
H GLVE G YF+SM+ +Y I+PGPEHYACM+D+LGR+G L EA +L
Sbjct: 527 -------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKEL 573
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
+N M +P VW ALL A R H N++L + AA +L ELEP +A PYV+LS+LYS GK
Sbjct: 574 LNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKW 633
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE- 609
+ + R KL+ + K PGCSWI + KVH F++ +S EI + I KE
Sbjct: 634 EEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEA 693
Query: 610 -----FDWPKHDWSLLGLERDWSYTADNI 633
++ HD G E +Y ++ +
Sbjct: 694 GYVPDMNFALHDMDEEGKELGLAYHSEKL 722
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 256/560 (45%), Gaps = 60/560 (10%)
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+VN S SN ++S K GR ++A ++F+ M ++D +W +M+ Y GR+ E
Sbjct: 31 FVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNE 90
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++F + P ++ + W++++ GY + C + +LF M+ G N T + C
Sbjct: 91 ARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSM 150
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM-SKRDAVSWNS 239
+ +G Q+H + FD + + ++ MY + + EA +F + KR+ V W +
Sbjct: 151 YVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTA 210
Query: 240 LISGYVHNGEIEEAYRLFERMPGKD----------------------------------- 264
+++GY NG+ +A F M G+
Sbjct: 211 MVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSG 270
Query: 265 -----FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
FV + ++ +S G+L + + M D V+W ++I G V EEA F
Sbjct: 271 FGANVFVG-SALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLF 329
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
M + ++ ++ T SVL+ + + +H+ +VK E+ + N+LV +Y+K
Sbjct: 330 RIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKR 389
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G A+ +F + +++++S+ S+++G NG EEAL LF +M+ G+ P+QI +VL
Sbjct: 390 GYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVL 449
Query: 440 SACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
SAC + ++E G ++ +K+ ++ +V + + G + +A + +SM +
Sbjct: 450 SACAELTVLEFGKQVHANFLKSGLGSSLSVDNS--LVSMYAKCGCIEDANKVFDSMEIQD 507
Query: 499 PPGVWGALL------GAGRTHLNL-DLAKLAAQHLMELEPDSATP--YVVLSDLYSVIGK 549
W AL+ G GR H L + + Q + E+ P Y + DL
Sbjct: 508 VI-TWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLG---- 562
Query: 550 KRDGNRVRMKKKLKRIRKSP 569
R G + K+ L ++ P
Sbjct: 563 -RSGKLMEAKELLNQMAVQP 581
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/592 (34%), Positives = 337/592 (56%), Gaps = 39/592 (6%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
+A++N N S+ A F TMP RN S+ MI F + G +A +LY +P +
Sbjct: 400 SAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQ--T 457
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
A+++ Y +VGR ++A IF+ ++ +VVAW +++ GY + G + EA+++F KMP
Sbjct: 458 VATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPV 517
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
KN +W AM+ G+++ + + +L + + R G + + T AC G +
Sbjct: 518 KNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVI 577
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H L + G ++ + N +I+MY + G +
Sbjct: 578 HSLAIKTGCQFNSYVMNGLISMYAKC-------------------------------GNV 606
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
E+ +F + KD VSW ++I+G S L+ + +F MP++D V+WTAIIS +V
Sbjct: 607 EDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAG 666
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
E A F++ML + ++PNQLT++S+LSA + G Q HA + K+ ++ + + N
Sbjct: 667 HGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGN 726
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SL+++Y KCG D + +F + E +++++N+++ G AQNGLG+EA+ +F +M+ EG++P
Sbjct: 727 SLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILP 785
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+Q++FL VL AC+H GLV+EG+ +F SM Y I P HY CMVD+LGRAG L+EA L
Sbjct: 786 DQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEAL 845
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL-EPDSATPYVVLSDLYSVIGK 549
I +M +P +W ALLGA R H N++L + A+ L ++ +P SAT YV+LS+L++ G
Sbjct: 846 IENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSAT-YVLLSNLFASQGM 904
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
+R K + + K PG SWI +K+K+H F+ G ++ ++EI L+
Sbjct: 905 WDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALK 956
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/513 (30%), Positives = 264/513 (51%), Gaps = 65/513 (12%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+N+MI + N + EA +F +N ++ ++TG+ + G EA E+
Sbjct: 197 MIQRDVVSWNSMINGY-SQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREV 255
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ +M R + V NA+ISGY++ G + A ++F+ M EK+V +W S+V GYC R+ E
Sbjct: 256 FESMTER--NVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSE 313
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
ARE+FD+MPE+N V+W M+ GY+ + + + +D+F+ M R + ++ A
Sbjct: 314 ARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITG 373
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ + + G++ D+++G++I+ Y R G +D A F M +R+ SW ++
Sbjct: 374 LDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTM 433
Query: 241 ISGYVHNGEIEEAYRLFERMPGK-------------------------------DFVSWT 269
I+ + G +++A +L+ER+P + + V+W
Sbjct: 434 IAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWN 493
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+I G++ G L+++ +LF MP K+ +W A+I+GFV NE+ EA IE+ R P
Sbjct: 494 AIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVP 553
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ + +S LSA A + G IH+ +K + + + N L+S+Y+KCGNV D +F
Sbjct: 554 SDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVF 613
Query: 390 TNIDERNIVSYNSMISGFAQN-------------------------------GLGEEALN 418
I ++ VS+NS+ISG ++N G GE AL+
Sbjct: 614 RTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALD 673
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
LF M G+ PNQ+T S+LSAC ++G ++ G
Sbjct: 674 LFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG 706
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 215/424 (50%), Gaps = 58/424 (13%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYM---KVDCFEDGFDLFLSMRRGGMAFNSITLT 172
GRV EAR +F++M +++VV+W +M++GY KVD FD F+ N T T
Sbjct: 185 GRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGK-------NIRTWT 237
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
IL +T Y + G ++EA +VF M++R
Sbjct: 238 IL-----------------------------------LTGYAKEGRIEEAREVFESMTER 262
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
+ VSWN++ISGYV NG+++ A +LF+ MP K+ SW +++TG+ + ++ ELF+ MP
Sbjct: 263 NVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMP 322
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
E++ V+W +ISG+V+ Y EA+ F++M R RP+Q VLSA L
Sbjct: 323 ERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGS 382
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+ +K E DV + +++++ Y++ G++ A F + ERN S+ +MI+ FAQ G
Sbjct: 383 LRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGR 442
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
++A+ L+ ++ ++ + T ++++A VG +++ + F + + P +
Sbjct: 443 LDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWN 493
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
++ + G L EA DL M + W A++ + + ++ A + L+EL
Sbjct: 494 AIIAGYTQNGMLKEAKDLFQKMPVKNSAS-WAAMIAG---FVQNEESREALELLIELHRS 549
Query: 533 SATP 536
+ P
Sbjct: 550 GSVP 553
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 39/235 (16%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
N+ I GRLG ++EA +VF+ M +RD VSWNS+I+GY NG+++EA LF+ GK+
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+WT ++TG++ +G +E++ E+F M E++ V+W A+ISG+V N + A + F EM
Sbjct: 235 TWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEM---- 290
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
E +V+ NS+V+ Y C + +A
Sbjct: 291 -----------------------------------PEKNVASWNSVVTGYCHCYRMSEAR 315
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+F + ERN VS+ MISG+ EA ++F KM P+Q F+ VLSA
Sbjct: 316 ELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSA 370
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/620 (36%), Positives = 332/620 (53%), Gaps = 65/620 (10%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGYLKVGRCEE 89
RNAVS+ +++ +V+ +A +++ M P + S NA R E
Sbjct: 165 RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGS-----RNIE 219
Query: 90 AARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
A R AMV +KDV ++VD Y K GRV A IF+KMP+ +VV+W A++ G
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISG-- 277
Query: 145 KVDCFEDGFD-----LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
C +G D L L M+ G+ N TL+ + +AC + G Q+HG + +
Sbjct: 278 ---CVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANA 334
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D D +G ++ MY + F+D+A KVF M RD + N+LISG H G +EA LF
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYE 394
Query: 260 MPGKDF-VSWTTMITGFSSKGNLEKSI--------------------------------- 285
+ + V+ TT+ S +LE +
Sbjct: 395 LRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSC 454
Query: 286 -----ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+F D + T++I+ + E A + F+EMLRK + P+ LSS+L+A
Sbjct: 455 LSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNA 514
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A+ + QG Q+HAH++K SD N+LV Y+KCG++ DA F+++ ER +VS+
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSW 574
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
++MI G AQ+G G+ AL LF +M DEG+ PN IT SVL ACNH GLV+E YF SMK
Sbjct: 575 SAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
++ I+ EHY+CM+D+LGRAG L +A++L+NSM F+ +WGALLGA R H + +L K
Sbjct: 635 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGK 694
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
LAA+ L LEP+ + +V+L++ Y+ G + +VR K I+K P SWI +KDKV
Sbjct: 695 LAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKV 754
Query: 581 HLFLAGRKSCLDLKEIEVTL 600
H F+ G KS KEI L
Sbjct: 755 HTFIVGDKSHPMTKEIYAKL 774
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 43/374 (11%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y K R AR +FD++P+ V+W+++V Y F MR G+ N
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
L ++ + R G QVH + GF D+ + N+++ MYG GFMD+A +VF+
Sbjct: 103 EFALPVVLKCVP---DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 228 MM-SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------- 261
S+R+AVSWN L+S YV N + +A ++F M
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219
Query: 262 --------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
KD + ++ + G ++ + +F MP+ D V+W A+ISG V
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N A ++M + PN TLSS+L A + + G QIH ++K N +SD
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I LV +Y+K + DA ++F + R+++ N++ISG + G +EAL+LF +++ EG
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399
Query: 428 LVPNQITFLSVLSA 441
L N+ T +VL +
Sbjct: 400 LGVNRTTLAAVLKS 413
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 216/474 (45%), Gaps = 53/474 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F +P VS+++++T + G+ A + + M A + VC N V
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRA---EGVCCNEF--ALPVVL 110
Query: 86 RCEEAARI---FEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKM-PEKNVVAW 136
+C AR+ AM DV ++V Y G + +AR +F++ E+N V+W
Sbjct: 111 KCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSW 170
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
++ Y+K D D +F M G+ + + AC G QVH +V R
Sbjct: 171 NGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVR 230
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
G+D D+ N+++ MY ++G +D A+ +F M D VSWN+LISG V NG A L
Sbjct: 231 MGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 290
Query: 257 FERM-------------------PGKDFVSWTTMITGFSSKGN----------------- 280
+M G I GF K N
Sbjct: 291 LLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 281 ---LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
L+ + ++F+ M +D + A+ISG + +++EA F E+ ++ + N+ TL++V
Sbjct: 351 NHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L ++A+ + Q+HA VK+ D + N L+ Y KC + DA R+F +I
Sbjct: 411 LKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI 470
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++ SMI+ +Q GE A+ LF +M +GL P+ S+L+AC + E+G
Sbjct: 471 IACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 524
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 133/282 (47%), Gaps = 37/282 (13%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF- 265
N +I+ Y + A +VF + VSW+SL++ Y +NG A + F M +
Sbjct: 41 NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 266 ---------------------VSWTTMITGFSSK--------------GNLEKSIELFNM 290
V M TGF S G ++ + +FN
Sbjct: 101 CNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE 160
Query: 291 M-PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
E++ V+W ++S +V N+Q +A + F EM+ ++P + S V++A + +
Sbjct: 161 ADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G Q+HA VV+M + DV N+LV +Y K G V A IF + + ++VS+N++ISG
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
NG A+ L +MK GLVPN T S+L AC+ G + G
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T+S L+ AA L G+ +HA ++K S S +N L+S YSKC A R+F I
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEI 63
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ VS++S+++ ++ NGL A+ F M+ EG+ N+ VL
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL 110
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALIS 79
SI +A F+++P R VS++AMI G + G A EL+ M + + +++
Sbjct: 555 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 614
Query: 80 GYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNV 133
G +EA R F +M +++ + M+D + G++ +A E+ + MP + N
Sbjct: 615 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 674
Query: 134 VAWTAMV 140
W A++
Sbjct: 675 SIWGALL 681
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/620 (36%), Positives = 332/620 (53%), Gaps = 65/620 (10%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGYLKVGRCEE 89
RNAVS+ +++ +V+ +A +++ M P + S NA R E
Sbjct: 165 RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGS-----RNIE 219
Query: 90 AARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
A R AMV +KDV ++VD Y K GRV A IF+KMP+ +VV+W A++ G
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISG-- 277
Query: 145 KVDCFEDGFD-----LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
C +G D L L M+ G+ N TL+ + +AC + G Q+HG + +
Sbjct: 278 ---CVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANA 334
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D D +G ++ MY + F+D+A KVF M RD + N+LISG H G +EA LF
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYE 394
Query: 260 MPGKDF-VSWTTMITGFSSKGNLEKSI--------------------------------- 285
+ + V+ TT+ S +LE +
Sbjct: 395 LRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSC 454
Query: 286 -----ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+F D + T++I+ + E A + F+EMLRK + P+ LSS+L+A
Sbjct: 455 LSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNA 514
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A+ + QG Q+HAH++K SD N+LV Y+KCG++ DA F+++ ER +VS+
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSW 574
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
++MI G AQ+G G+ AL LF +M DEG+ PN IT SVL ACNH GLV+E YF SMK
Sbjct: 575 SAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
++ I+ EHY+CM+D+LGRAG L +A++L+NSM F+ +WGALLGA R H + +L K
Sbjct: 635 MFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGK 694
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
LAA+ L LEP+ + +V+L++ Y+ G + +VR K I+K P SWI +KDKV
Sbjct: 695 LAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKV 754
Query: 581 HLFLAGRKSCLDLKEIEVTL 600
H F+ G KS KEI L
Sbjct: 755 HTFIVGDKSHPMTKEIYAKL 774
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 180/374 (48%), Gaps = 43/374 (11%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y K R AR FD++P+ V+W+++V Y F MR G+ N
Sbjct: 43 LISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
L ++ + R G QVH + GF D+ + N+++ MYG GFMD+A +VF+
Sbjct: 103 EFALPVVLKCVP---DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 228 MM-SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------- 261
S+R+AVSWN L+S YV N + +A ++F M
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219
Query: 262 --------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
KD + ++ + G ++ + +F MP+ D V+W A+ISG V
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N A ++M + PN TLSS+L A + + G QIH ++K N +SD
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I LV +Y+K + DA ++F + R+++ N++ISG + G +EAL+LF +++ EG
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399
Query: 428 LVPNQITFLSVLSA 441
L N+ T +VL +
Sbjct: 400 LGVNRTTLAAVLKS 413
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 215/474 (45%), Gaps = 53/474 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A F +P VS+++++T + G+ A + + M A + VC N V
Sbjct: 56 ARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRA---EGVCCNEF--ALPVVL 110
Query: 86 RCEEAARI---FEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKM-PEKNVVAW 136
+C AR+ AM DV ++V Y G + +AR +F++ E+N V+W
Sbjct: 111 KCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSW 170
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
++ Y+K D D +F M G+ + + AC G QVH +V R
Sbjct: 171 NGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVR 230
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
G+D D+ N+++ MY ++G +D A+ +F M D VSWN+LISG V NG A L
Sbjct: 231 MGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 290
Query: 257 FERM-------------------PGKDFVSWTTMITGFSSKGN----------------- 280
+M G I GF K N
Sbjct: 291 LLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 281 ---LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
L+ + ++F+ M +D + A+ISG + +++EA F E+ ++ + N+ TL++V
Sbjct: 351 NHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L ++A+ + Q+HA VK+ D + N L+ Y KC + DA R+F +I
Sbjct: 411 LKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI 470
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++ SMI+ +Q GE A+ LF +M +GL P+ S+L+AC + E+G
Sbjct: 471 IACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 524
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 132/282 (46%), Gaps = 37/282 (13%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF- 265
N +I+ Y + A + F + VSW+SL++ Y +NG A + F M +
Sbjct: 41 NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 266 ---------------------VSWTTMITGFSSK--------------GNLEKSIELFNM 290
V M TGF S G ++ + +FN
Sbjct: 101 CNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNE 160
Query: 291 M-PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
E++ V+W ++S +V N+Q +A + F EM+ ++P + S V++A + +
Sbjct: 161 ADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEA 220
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G Q+HA VV+M + DV N+LV +Y K G V A IF + + ++VS+N++ISG
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
NG A+ L +MK GLVPN T S+L AC+ G + G
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T+S L+ AA L G+ +HA ++K S S +N L+S YSKC A R F I
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEI 63
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ VS++S+++ ++ NGL A+ F M+ EG+ N+ VL
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL 110
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALIS 79
SI +A F+++P R VS++AMI G + G A EL+ M + + +++
Sbjct: 555 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 614
Query: 80 GYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNV 133
G +EA R F +M +++ + M+D + G++ +A E+ + MP + N
Sbjct: 615 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 674
Query: 134 VAWTAMV 140
W A++
Sbjct: 675 SIWGALL 681
>gi|242063912|ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
gi|241933076|gb|EES06221.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
Length = 603
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/602 (35%), Positives = 340/602 (56%), Gaps = 27/602 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M++R ++N MI+ L+ N + +A +F TMP RN+VS+AA++TG+ R G EA EL
Sbjct: 19 MSERNVFTWNCMISGLVRNGM-LTDARGVFDTMPFRNSVSWAALLTGYARCGRVAEAREL 77
Query: 61 YVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
+ MP R SV S NA+ISGYL G + A +F+ M ++ V+W M+ GY K+ RV
Sbjct: 78 FDRMPDR---SVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLMMISGYMKRKRVR 134
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM-AFNSI----TLTIL 174
EAREIFD+ P A++ GY + +D DLF M+ + ++N++ T +
Sbjct: 135 EAREIFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDLVSWNAMITGYTRAGM 194
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
+ R F + D + +I+ Y + G +D A KVF M RD
Sbjct: 195 MQVAQRLFDEMP-------------EKDTVSWTAIVRGYLQNGDVDAAWKVFQDMPDRDV 241
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
++WN+++SG+V + +++A RLF MP +D VSW T++ G+ +G+++ + F MPEK
Sbjct: 242 LAWNTMMSGFVVSERLDDALRLFADMPDRDLVSWNTILQGYVQQGDMDGATAWFRKMPEK 301
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D+ +W +ISG+ + E A EM + RP+Q T S +S ++ A L G +H
Sbjct: 302 DEASWNTLISGYKD----EGALNLLSEMTQGGYRPDQATWSVAISICSSLAALGCGRMVH 357
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+K E D + +SL+S+YSKCG + +A ++F I +R+ V++N+MI+ +A +GL
Sbjct: 358 VCTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAA 417
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
EAL LF +M +G P+ TFLSVLSAC H G + EG +F+SM+ +N+ P +HY+CM
Sbjct: 418 EALTLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPRSDHYSCM 477
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
VD+LGR+G + +A + + + W L + H ++ L +L A+++++ P
Sbjct: 478 VDLLGRSGFVHQAYNFTRRIPSDLQINAWETLFSSCNAHGDIQLGELVAKNVLQSRPSDG 537
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLK 594
Y +LS++Y+ G VR K + ++K GCSWI LK V F + K+ ++
Sbjct: 538 GMYTLLSNIYAAKGMWSSAASVRGLMKEQGLKKETGCSWIELKGDVVSFSSNDKAHPLIE 597
Query: 595 EI 596
+I
Sbjct: 598 QI 599
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 134/246 (54%), Gaps = 16/246 (6%)
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
R G + A +VF MS+R+ +WN +ISG V NG + +A +F+ MP ++ VSW ++TG
Sbjct: 5 RAGRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALLTG 64
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP--NQL 332
++ G + ++ ELF+ MP++ V+W A+ISG++ N + A F DV P N +
Sbjct: 65 YARCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLF------DVMPARNDV 118
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
+ ++S + + +I S+ N+L+S Y++ G + DA +F +
Sbjct: 119 SWLMMISGYMKRKRVREAREIFDRAPS----PTTSVCNALLSGYAEHGYLKDAEDLFGRM 174
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
++VS+N+MI+G+ + G+ + A LF +M ++ + +++ +++ G V+ +
Sbjct: 175 QTPDLVSWNAMITGYTRAGMMQVAQRLFDEMPEK----DTVSWTAIVRGYLQNGDVDAAW 230
Query: 453 IYFKSM 458
F+ M
Sbjct: 231 KVFQDM 236
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/647 (32%), Positives = 359/647 (55%), Gaps = 49/647 (7%)
Query: 14 TALINNN--CS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--W 68
TALIN + C I +A ++F +P R+ V++ +MITG R G F +A L+ M
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREI 124
D V +L+ E+ ++ M E ++ +++ Y K G + +A E+
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD + +NVV+WTAM+ G+ + ++ F F M G+ N +T + AC
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
+ G Q+ + G+ D + ++++MY + G + +A++VF +SK++ V+WN++I+ Y
Sbjct: 430 KRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAY 489
Query: 245 VHNGEIEEAYRLFERM------P--------------------GK-------------DF 265
V + + + A F+ + P GK D
Sbjct: 490 VQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDL 549
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+++ F + G+L + LFN MP++D V+W II+GFV + + + AF +F M
Sbjct: 550 HVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQES 609
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++P+++T + +L+A A+ L +G ++HA + + + DV + L+S+Y+KCG++ DA
Sbjct: 610 GIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDA 669
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+++F + ++N+ S+ SMI+G+AQ+G G+EAL LF +M+ EG+ P+ ITF+ LSAC H
Sbjct: 670 HQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHA 729
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GL+EEG +F+SMK +NIEP EHY CMVD+ GRAG L EA++ I M EP VWGA
Sbjct: 730 GLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGA 788
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA + HLN++LA+ AAQ +EL+P+ +V+LS++Y+ G ++ ++R + +
Sbjct: 789 LLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGV 848
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
K PG SWI + KVH F + K+ +EI L+ + ++ +
Sbjct: 849 VKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGY 895
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 258/505 (51%), Gaps = 81/505 (16%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAM------------------------------- 97
+D+ +NA+++ K G+ EA ++ E +
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 98 --------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
V+ D+ W ++++ Y K G I A++IFD M EK+V +W ++ GY++ +
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
E+ F L M + + + T + AC +G +++ L+ + G+D D+ +G ++
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK 263
I M+ + G + +A KVF + RD V+W S+I+G +G ++A LF+RM P K
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 264 -DFVS-------------------------W-------TTMITGFSSKGNLEKSIELFNM 290
FVS W T +++ ++ G++E ++E+F++
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+ ++ V+WTA+I+GF + + +EAF +F +M+ + PN++T S+L A ++ + L +G
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
QI H+++ SD ++ +L+S+Y+KCG++ DA+R+F I ++N+V++N+MI+ + Q+
Sbjct: 433 QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQH 492
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPE 469
+ AL F+ + EG+ PN TF S+L+ C +E G +++F MK +E
Sbjct: 493 EQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLH 550
Query: 470 HYACMVDILGRAGSLAEAIDLINSM 494
+V + G L A +L N M
Sbjct: 551 VSNALVSMFVNCGDLMSAKNLFNDM 575
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 256/478 (53%), Gaps = 59/478 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSV------------- 72
A +IF M ++ S+ ++ G+V+ G++ EA +L+ M +DSV
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV---QDSVKPDKRTFVSMLNA 220
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
C++A + GR E I +A + D+ ++++ + K G + +A ++FD +P ++
Sbjct: 221 CADAR---NVDKGR-ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD 276
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+V WT+M+ G + F+ +LF M G+ + + L AC +G +VH
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ G+D +I +G +I++MY + G M++A +VF ++ R+ VSW ++I+G+ +G I+E
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396
Query: 253 AYRLFERM------P---------------------------------GKDFVSWTTMIT 273
A+ F +M P G D T +++
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS 456
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G+L+ + +F + +++ V W A+I+ +V +EQY+ A F +L++ ++PN T
Sbjct: 457 MYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+S+L+ ++ +L G +H ++K +ESD+ + N+LVS++ CG+++ A +F ++
Sbjct: 517 FTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+R++VS+N++I+GF Q+G + A + F+ M++ G+ P++ITF +L+AC + EG
Sbjct: 577 KRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 233/476 (48%), Gaps = 57/476 (11%)
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
G C KGR + +I K+ A+++ K F + + + + T
Sbjct: 59 GRCPKGRCVVFADI------KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQT 112
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ L + C +F +G +++ + + G DI + N++I MY + G A ++F M
Sbjct: 113 YSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMR 172
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIE 286
++D SWN L+ GYV +G EEA++L E+M D ++ +M+ + N++K E
Sbjct: 173 EKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRE 232
Query: 287 LFNM-----------------------------------MPEKDDVTWTAIISGFVNNEQ 311
L+N+ +P +D VTWT++I+G + +
Sbjct: 233 LYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGR 292
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
+++A F M + V+P+++ S+L A L QG ++HA + ++ ++++ + +
Sbjct: 293 FKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTA 352
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
++S+Y+KCG++ DA +F + RN+VS+ +MI+GFAQ+G +EA F KM + G+ PN
Sbjct: 353 ILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPN 412
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG----PEHYACMVDILGRAGSLAEA 487
++TF+S+L AC+ ++ G + IE G ++ + + GSL +A
Sbjct: 413 RVTFMSILGACSSPSALKRG-----QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDA 467
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
+ ++ + W A++ A H D A Q L++ ++P+S+T +L+
Sbjct: 468 HRVFEKISKQNVVA-WNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 194/362 (53%), Gaps = 16/362 (4%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV----SWNSLISGYVHNGEIEEAYRLF 257
D N+++ + G +EA +V + ++++L+ + + + R++
Sbjct: 74 DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIY 133
Query: 258 ERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+ D W T+I ++ GN + ++F+ M EKD +W ++ G+V + YE
Sbjct: 134 NHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYE 193
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EAF+ +M++ V+P++ T S+L+A A +++G +++ ++K ++D+ + +L+
Sbjct: 194 EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+++ KCG++ DA ++F N+ R++V++ SMI+G A++G ++A NLF++M++EG+ P+++
Sbjct: 254 NMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKV 313
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY--ACMVDILGRAGSLAEAIDLI 491
F+S+L ACNH +E+G MK + E Y ++ + + GS+ +A+++
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMK---EVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLSDLYSVIGK 549
+ + W A++ H +D A L ++E +EP+ T +L S
Sbjct: 371 DLVKGRNVVS-WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429
Query: 550 KR 551
KR
Sbjct: 430 KR 431
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/664 (32%), Positives = 350/664 (52%), Gaps = 53/664 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCS 74
S+ EA +F ++ VS+ MI+G+ RG+ EA L+ M + S+ S
Sbjct: 94 SVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILS 153
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
L GR E R+ EA + + +++ Y K G V +AR +FD M ++ V
Sbjct: 154 ACSSPAALNWGR-EVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEV 212
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WT + Y + ++ + +M + G+ + IT + ACG +G Q+H +
Sbjct: 213 SWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQI 272
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
D+ + ++ MY + G + +A +VF + RD ++WN++I G V +G++EEA+
Sbjct: 273 VESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAH 332
Query: 255 RLFERM---------------------PG------------------KDFVSWTTMITGF 275
+F RM PG D +I +
Sbjct: 333 GMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMY 392
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
S G+++ + ++F+ MP++D V+WTA++ G+ + Q E+F F +ML++ V N++T
Sbjct: 393 SKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYM 452
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
VL A + L G +IHA VVK + +D+++ N+L+S+Y KCG+V DA R+ + R
Sbjct: 453 CVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR 512
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
++V++N++I G AQNG G EAL F MK E + PN TF++V+SAC LVEEG F
Sbjct: 513 DVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQF 572
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
SM+ Y I P +HYACMVDIL RAG L EA D+I +M F+P +WGALL A R H N
Sbjct: 573 ASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGN 632
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+++ + AA+ ++LEP +A YV LS +Y+ G RD ++R K + ++K PG SWI
Sbjct: 633 VEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIE 692
Query: 576 LKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPK------HDWSLLGLERDWSYT 629
+ +VH F+AG +S +EI L+ ++K K + HD G ER +
Sbjct: 693 VAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHH 752
Query: 630 ADNI 633
++ +
Sbjct: 753 SEKL 756
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 193/374 (51%), Gaps = 43/374 (11%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y G V EAR +FDK K+VV+W M+ GY ++ F+LF M++ G+ + T
Sbjct: 89 YVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTF 148
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ AC G +VH V G + +GN++I+MY + G + +A +VF M+
Sbjct: 149 VSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS 208
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSWTTMITGFSSKGNLEK-- 283
RD VSW +L Y +G +E+ + + M P + +++ +++ S LEK
Sbjct: 209 RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSR--ITYMNVLSACGSLAALEKGK 266
Query: 284 ---------------------------------SIELFNMMPEKDDVTWTAIISGFVNNE 310
+ E+F +P +D + W +I G V++
Sbjct: 267 QIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSG 326
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
Q EEA F ML++ V P+++T ++LSA A L G +IHA VK + SDV N
Sbjct: 327 QLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGN 386
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+++YSK G++ DA ++F + +R++VS+ +++ G+A G E+ + F+KM +G+
Sbjct: 387 ALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEA 446
Query: 431 NQITFLSVLSACNH 444
N+IT++ VL AC++
Sbjct: 447 NKITYMCVLKACSN 460
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 143/298 (47%), Gaps = 62/298 (20%)
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
D+ + + G +S L ++C + G QVH + RFG ++ + N+++ +Y
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMIT 273
VH G + EA RLF++ K V
Sbjct: 90 -------------------------------VHCGSVNEARRLFDKFSNKSVV------- 111
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+W +ISG+ + +EAF F M ++ + P++ T
Sbjct: 112 ------------------------SWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFT 147
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
S+LSA ++ A LN G ++H V++ + ++ ++ N+L+S+Y+KCG+V DA R+F +
Sbjct: 148 FVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMA 207
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
R+ VS+ ++ +A++G +E+L + M EG+ P++IT+++VLSAC + +E+G
Sbjct: 208 SRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKG 265
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 11/127 (8%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L + L G Q+H H+++ M+ +V I N+L+ LY CG+V +A R+F ++
Sbjct: 50 LLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKS 109
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----------HV 445
+VS+N MISG+A GLG+EA NLF M+ EGL P++ TF+S+LSAC+ HV
Sbjct: 110 VVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHV 169
Query: 446 GLVEEGF 452
++E G
Sbjct: 170 RVMEAGL 176
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/635 (34%), Positives = 343/635 (54%), Gaps = 80/635 (12%)
Query: 21 CSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS 79
C +E A ++F MP RN SY A+++ + G EA ++ +MP D NA++S
Sbjct: 67 CGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEP--DQCSWNAMVS 124
Query: 80 GYLKVGRCEEAARIF----------------------------------EAMVEK----- 100
G+ + R EEA R F A++ K
Sbjct: 125 GFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLL 184
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV ++VD Y K G V A+ FD M +N+V+W +++ Y + ++F+ M
Sbjct: 185 DVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMM 244
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFM 219
G+ + ITL + AC + REG+Q+H +V R + D++LGN+++ MY +
Sbjct: 245 DNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCR-- 302
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG 279
+ EA +F+RMP ++ VS T+M+ G++
Sbjct: 303 -----------------------------RVNEARLVFDRMPLRNVVSETSMVCGYARAA 333
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+++ + +F+ M EK+ V+W A+I+G+ N + EEA R F+ + R+ + P T ++L+
Sbjct: 334 SVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLN 393
Query: 340 ASAATATLNQGSQIHAHVVKMNM------ESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
A A A L G Q H ++K ESD+ + NSL+ +Y KCG V D +F +
Sbjct: 394 ACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMV 453
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
ER++VS+N+MI G+AQNG G AL +FRKM G P+ +T + VLSAC+H GLVEEG
Sbjct: 454 ERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRR 513
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
YF SM+T + P +H+ CMVD+LGRAG L EA DLI +M +P VWG+LL A + H
Sbjct: 514 YFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVH 573
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N++L K A+ LME++P ++ PYV+LS++Y+ +G+ +D RVR + + + + K PGCSW
Sbjct: 574 GNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSW 633
Query: 574 IILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
I ++ +VH+F+ K K+I + L+ +++ K
Sbjct: 634 IEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMK 668
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 130/215 (60%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N L+ Y G E+A ++F+RMP ++ S+ +++ + G L+++ +F MPE D
Sbjct: 58 NRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQC 117
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W A++SGF ++++EEA R+F++M +D N+ + S LSA A LN G QIHA +
Sbjct: 118 SWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALI 177
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
K DV + ++LV +YSKCG V A R F + RNIVS+NS+I+ + QNG +AL
Sbjct: 178 SKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKAL 237
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+F M D G+ P++IT SV+SAC + EG
Sbjct: 238 EVFVMMMDNGVEPDEITLASVVSACASWSAIREGL 272
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/647 (32%), Positives = 359/647 (55%), Gaps = 49/647 (7%)
Query: 14 TALINNN--CS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--W 68
TALIN + C I +A ++F +P R+ V++ +MITG R G F +A L+ M
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREI 124
D V +L+ E+ ++ M E ++ +++ Y K G + +A E+
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD + +NVV+WTAM+ G+ + ++ F F M G+ N +T + AC
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
+ G Q+ + G+ D + ++++MY + G + +A++VF +SK++ V+WN++I+ Y
Sbjct: 430 KRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAY 489
Query: 245 VHNGEIEEAYRLFERM------P--------------------GK-------------DF 265
V + + + A F+ + P GK D
Sbjct: 490 VQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDL 549
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+++ F + G+L + LFN MP++D V+W II+GFV + + + AF +F M
Sbjct: 550 HVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQES 609
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++P+++T + +L+A A+ L +G ++HA + + + DV + L+S+Y+KCG++ DA
Sbjct: 610 GIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDA 669
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+++F + ++N+ S+ SMI+G+AQ+G G+EAL LF +M+ EG+ P+ ITF+ LSAC H
Sbjct: 670 HQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHA 729
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GL+EEG +F+SMK +NIEP EHY CMVD+ GRAG L EA++ I M EP VWGA
Sbjct: 730 GLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGA 788
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA + HLN++LA+ AAQ +EL+P+ +V+LS++Y+ G ++ ++R + +
Sbjct: 789 LLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGV 848
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
K PG SWI + KVH F + K+ +EI L+ + ++ +
Sbjct: 849 VKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGY 895
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 256/478 (53%), Gaps = 59/478 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSV------------- 72
A +IF M ++ S+ ++ G+V+ G++ EA +L+ M +DSV
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV---QDSVKPDKRTFVSMLNA 220
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
C++A + GR E I +A + D+ ++++ + K G + +A ++FD +P ++
Sbjct: 221 CADAR---NVDKGR-ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD 276
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+V WT+M+ G + F+ +LF M G+ + + L AC +G +VH
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ G+D +I +G +I++MY + G M++A +VF ++ R+ VSW ++I+G+ +G I+E
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396
Query: 253 AYRLFERM------P---------------------------------GKDFVSWTTMIT 273
A+ F +M P G D T +++
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS 456
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G+L+ + +F + +++ V W A+I+ +V +EQY+ A F +L++ ++PN T
Sbjct: 457 MYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSST 516
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+S+L+ ++ +L G +H ++K +ESD+ + N+LVS++ CG+++ A +F ++
Sbjct: 517 FTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+R++VS+N++I+GF Q+G + A + F+ M++ G+ P++ITF +L+AC + EG
Sbjct: 577 KRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 247/497 (49%), Gaps = 75/497 (15%)
Query: 40 SYAAMITGFVRRGMFYEAEELY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM 97
+Y+A++ ++ + E +Y + D N LI+ Y K G A +IF+ M
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
EKDV +W ++ GY + G +E+ F L
Sbjct: 172 REKDVYSWNLLLGGYVQHG-------------------------------LYEEAFKLHE 200
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
M + + + T + AC +G +++ L+ + G+D D+ +G ++I M+ + G
Sbjct: 201 QMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCG 260
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK-DFVS--- 267
+ +A KVF + RD V+W S+I+G +G ++A LF+RM P K FVS
Sbjct: 261 DIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLR 320
Query: 268 ----------------------W-------TTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
W T +++ ++ G++E ++E+F+++ ++ V+
Sbjct: 321 ACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVS 380
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA+I+GF + + +EAF +F +M+ + PN++T S+L A ++ + L +G QI H++
Sbjct: 381 WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII 440
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ SD ++ +L+S+Y+KCG++ DA+R+F I ++N+V++N+MI+ + Q+ + AL
Sbjct: 441 EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDI 477
F+ + EG+ PN TF S+L+ C +E G +++F MK +E +V +
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSM 558
Query: 478 LGRAGSLAEAIDLINSM 494
G L A +L N M
Sbjct: 559 FVNCGDLMSAKNLFNDM 575
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 233/476 (48%), Gaps = 57/476 (11%)
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
G C KGR + +I K+ A+++ K F + + + + T
Sbjct: 59 GRCPKGRCVVFADI------KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQT 112
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ L + C +F +G +++ + + G DI + N++I MY + G A ++F M
Sbjct: 113 YSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMR 172
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIE 286
++D SWN L+ GYV +G EEA++L E+M D ++ +M+ + N++K E
Sbjct: 173 EKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRE 232
Query: 287 LFNM-----------------------------------MPEKDDVTWTAIISGFVNNEQ 311
L+N+ +P +D VTWT++I+G + +
Sbjct: 233 LYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGR 292
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
+++A F M + V+P+++ S+L A L QG ++HA + ++ ++++ + +
Sbjct: 293 FKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTA 352
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
++S+Y+KCG++ DA +F + RN+VS+ +MI+GFAQ+G +EA F KM + G+ PN
Sbjct: 353 ILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPN 412
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG----PEHYACMVDILGRAGSLAEA 487
++TF+S+L AC+ ++ G + IE G ++ + + GSL +A
Sbjct: 413 RVTFMSILGACSSPSALKRG-----QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDA 467
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
+ ++ + W A++ A H D A Q L++ ++P+S+T +L+
Sbjct: 468 HRVFEKISKQNVVA-WNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILN 522
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 193/362 (53%), Gaps = 16/362 (4%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV----SWNSLISGYVHNGEIEEAYRLF 257
D N+++ + G +EA +V + ++++L+ + + + R++
Sbjct: 74 DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIY 133
Query: 258 ERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+ D T+I ++ GN + ++F+ M EKD +W ++ G+V + YE
Sbjct: 134 NHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYE 193
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EAF+ +M++ V+P++ T S+L+A A +++G +++ ++K ++D+ + +L+
Sbjct: 194 EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+++ KCG++ DA ++F N+ R++V++ SMI+G A++G ++A NLF++M++EG+ P+++
Sbjct: 254 NMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKV 313
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY--ACMVDILGRAGSLAEAIDLI 491
F+S+L ACNH +E+G MK + E Y ++ + + GS+ +A+++
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMK---EVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLSDLYSVIGK 549
+ + W A++ H +D A L ++E +EP+ T +L S
Sbjct: 371 DLVKGRNVVS-WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429
Query: 550 KR 551
KR
Sbjct: 430 KR 431
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/585 (35%), Positives = 324/585 (55%), Gaps = 37/585 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A + F M RN +++ MI G A +Y P + S AL++G + G
Sbjct: 278 AIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPS--QTALLTGLARCG 335
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
R EA +FE + + VV+W +M+ GY + G V EA+E+FD+MP +N ++W M+ GY +
Sbjct: 336 RITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQ 395
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
E+ DL ++ R GM + +LT F AC G QVH L + G ++ +
Sbjct: 396 NGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYV 455
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
N++I+MYG+ M+ +V F RM KD
Sbjct: 456 CNALISMYGKCRNMEYVRQV-------------------------------FNRMRVKDT 484
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
VSW + I LE + +F+ M +D V+WT IIS + E+ +EA +F ML +
Sbjct: 485 VSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHE 544
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+PN L+ +LS + G QIH +K M+S++ + N+L+S+Y KCG D+
Sbjct: 545 HEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADS 603
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+++F +++ER+I ++N+ I+G AQ+GLG EA+ ++ M+ G++PN++TF+ +L+AC+H
Sbjct: 604 HKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHA 663
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GLV+EG+ +FKSM Y + P EHYACMVD+LGR G + A I M EP +W A
Sbjct: 664 GLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSA 723
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA + H N ++ + AA+ L EP +A YV+LS++YS +G + +R K + +
Sbjct: 724 LLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGV 783
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ---TISKGT 607
K PGCSW+ +++KVH F+ G K ++EI+ TLQ T+ +GT
Sbjct: 784 SKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGT 828
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 262/515 (50%), Gaps = 40/515 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R ++N+MI+A N+ + +A +F + N + +++G+ R G +A +
Sbjct: 59 MPHRDIIAWNSMISAYCNSGM-LEDARILFDAISGGNVRTATILLSGYARLGRVLDARRV 117
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R ++V NA++S Y++ G A R+F+AM +DV +W SMV GYC ++++
Sbjct: 118 FDGMPER--NTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVD 175
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F +MP++N+V WT M+ GY++++ G+D+F M G + + + A
Sbjct: 176 AWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTG 235
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR-LGFMDEANKVFSMMSKRDAVSWNS 239
+ LV + GF+ D+++G SI+ +Y R +D A K F M +R+ +W++
Sbjct: 236 LQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWST 295
Query: 240 LISGYVHNGEIE-------------------------------EAYRLFERMPGKDFVSW 268
+I+ H G I+ EA LFE++P VSW
Sbjct: 296 MIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSW 355
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
MITG+ G ++++ ELF+ MP ++ ++W +I+G+ N + EEA + R +
Sbjct: 356 NAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGML 415
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P+ +L+S A + L G Q+H+ VK + + + N+L+S+Y KC N+ ++
Sbjct: 416 PSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQV 475
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + ++ VS+NS I+ QN + E+A ++F M L + +++ +++SA
Sbjct: 476 FNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNM----LSRDVVSWTTIISAYAQAERG 531
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
+E +FK+M + +P ++ + G GS
Sbjct: 532 DEAVEFFKTMLHEHE-KPNSPILTILLSVCGGLGS 565
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 207/429 (48%), Gaps = 54/429 (12%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D A + + + GR+ EARE+FD MP ++++AW +M+ Y ED LF ++
Sbjct: 32 DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G N T TIL Y RLG +
Sbjct: 92 GG----NVRTATILLSG-----------------------------------YARLGRVL 112
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
+A +VF M +R+ V+WN+++S YV NG+I A RLF+ MP +D SW +M+TG+
Sbjct: 113 DARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQ 172
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+ + LF MP+++ VTWT +ISG+V EQ+ + + F M + P+Q +SVLSA
Sbjct: 173 MVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSA 232
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD-AYRIFTNIDERNIVS 399
L + V+K ESDV I S++++Y++ + +D A + F + ERN +
Sbjct: 233 VTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYT 292
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+++MI+ + G + A+ ++ + + +P+Q L+ L+ C G + E I F+ +
Sbjct: 293 WSTMIAALSHGGRIDAAIAVYGRDPVKS-IPSQTALLTGLARC---GRITEARILFEQIP 348
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG---AGRTHLNL 516
+P + M+ + G + EA +L + M F G + G GR+ L
Sbjct: 349 -----DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEAL 403
Query: 517 DLAKLAAQH 525
DL L A H
Sbjct: 404 DL--LQALH 410
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/626 (35%), Positives = 343/626 (54%), Gaps = 53/626 (8%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M++R S+N++I+ L+ + E+ +F+ MP ++ S+ +MI GF + F EA +
Sbjct: 85 MSERNVFSFNSIISTLMRWG-FVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDW 143
Query: 61 YVNMPARWRDSVCSN--ALISGYLKVGRCEE---AARIFEAMVEK-----DVVAWGSMVD 110
+V M RD N + SG R ++ A+I ++ K DV ++D
Sbjct: 144 FVRMH---RDDFVLNDYSFGSGLSACSRLKDLKLGAQI-HGLISKSKYSLDVFMGSGLID 199
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K G V AR +FD M EKNVV+W ++ Y + + + F M G + +T
Sbjct: 200 FYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVT 259
Query: 171 LTILFEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
L + AC ++EGVQ+H +V F D+ILGN+++ MY +
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKC------------- 306
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
G + EA +F+RMP ++ VS TTM++G++ +++ + +F
Sbjct: 307 ------------------GRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFA 348
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+ +KD V+W A+I+G+ N + EEA F + R+ V P T ++L+ASA A L
Sbjct: 349 TIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLEL 408
Query: 350 GSQIHAHVVKMNM------ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
G Q H+HVVK E D+ + NSL+ +Y KCG+V + R+F N+ E++ VS+N+M
Sbjct: 409 GRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTM 468
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I G+AQNG G EAL LF+KM + G P+ +T + L AC+H GLVEEG YF SM +
Sbjct: 469 IIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHG 528
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
+ P +HY CMVD+LGRAG L EA DLI SM +P VW +LL A + H N+ L K A
Sbjct: 529 LLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVA 588
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ + E++P S+ PYV+L+++YS +G+ D VR + + + K PGCSWI ++ VH+F
Sbjct: 589 EKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVF 648
Query: 584 LAGRKSCLDLKEIEVTLQTISKGTKE 609
+ K KEI L+ ++K ++
Sbjct: 649 MVKDKRHPQKKEIYSILKLLTKHMRQ 674
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 148/285 (51%), Gaps = 31/285 (10%)
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+S L + C + R+ VHG + + F ++ + N +I +YG+ G++D A KVF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
MS+R+ S+NS+IS + G ++E+ LF MP KD SW +MI GF+
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFA---------- 132
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
++++EEA WF+ M R D N + S LSA +
Sbjct: 133 ---------------------QHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKD 171
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L G+QIH + K DV + + L+ YSKCG V A R+F ++E+N+VS+N +I+
Sbjct: 172 LKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITC 231
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ QNG EAL F +M + G P+++T SV+SAC + +EG
Sbjct: 232 YEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEG 276
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/582 (34%), Positives = 333/582 (57%), Gaps = 41/582 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+++A ++F P + VS+ A+++ + RRGM +A EL+ AR R+ V AL+SGY
Sbjct: 58 VWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDAR-RNVVTWTALLSGYA 116
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ +EA +F+ M +++VV+W +M++ Y GRV +A +FD+MP ++ +W ++
Sbjct: 117 RARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLAT 176
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
++ + +LF M + D
Sbjct: 177 LVRSGSVDKARELFGRMP---------------------------------------ERD 197
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
++ +++ R G +DEA +F M +R+ VSWN++ISGY N I+EA LF +MP
Sbjct: 198 VMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPE 257
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
+D S M+TGF +L+++ ELF+ MPE++ VTWT +++G++ +Q E A F M
Sbjct: 258 RDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGM 317
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L RPNQ+T L A + A L +G Q+H + K + D ++++L+++Y+KCG +
Sbjct: 318 LMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEI 377
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A ++F E++++S+N +I+ +A +G+G EA+ L+ KM++ G PN +T++ +LSAC
Sbjct: 378 GLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSAC 437
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG- 501
+H GLV+EG F+SM +I EHY C++D+ RAG L +A LI+ + +P G
Sbjct: 438 SHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGS 497
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VW ALLG H N + LAA++L++ EPD+A Y +LS++Y+ GK ++ +R +
Sbjct: 498 VWSALLGGCNAHGNESIGNLAARNLLQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMN 557
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ ++K PGCSWI + +KVH+F+A KS + I LQ I
Sbjct: 558 NRGLKKQPGCSWIEVANKVHVFVARDKSHSESDLIYGLLQNI 599
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 164/295 (55%), Gaps = 7/295 (2%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N ++ L+ + S+ +A E+F MP R+ +++ M+ G R G EA L
Sbjct: 162 MPVRDAGSWNILLATLVRSG-SVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVL 220
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ +MP R+ V NA+ISGY + R +EA +F M E+D+ + MV G+ + +
Sbjct: 221 FDSMPE--RNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKR 278
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
ARE+FD+MPE+NVV WT M++GY+K E LF M G N +T +AC
Sbjct: 279 ARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSD 338
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
EG QVH ++ + F +D + ++++ +Y + G + A K+F + ++D +SWN +
Sbjct: 339 LAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGI 398
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
I+ Y H+G EA L+E+M + V++ +++ S G +++ +++F M
Sbjct: 399 IAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESM 453
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/650 (33%), Positives = 349/650 (53%), Gaps = 71/650 (10%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------SVCS- 74
A ++F MP R VS+ MI+ + + G F EA L +M SVC+
Sbjct: 51 ARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCAR 110
Query: 75 --------------------------NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
+AL+ Y EA R+F+ +V ++ V W M
Sbjct: 111 LRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLM 170
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV-DCFEDGFDLF-LSMRRGGMAF 166
+ GY + +A +F KMP ++VVAWT ++ G+ K D ++F L MR G
Sbjct: 171 LVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTP 230
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR----------- 215
N T + ACGR G VHGL+ + G +YD +G +++ Y
Sbjct: 231 NEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVC 290
Query: 216 --------------------LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+G +++A VF+ M++ + VS+N +I GY G+++++ R
Sbjct: 291 KGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKR 350
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISGFVNNEQYEE 314
LFE+MP + S TMI+ +S G ++K++ELF EKD VTW ++ISG++++ Q EE
Sbjct: 351 LFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEE 410
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A + +I M R ++ Q T S++ A + +L+QG +HAH++K ES+V + SL+
Sbjct: 411 ALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLID 470
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSKCG++++A F +I N+ ++ ++I+G A +GLG EA++LF +M ++GL PN T
Sbjct: 471 MYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGAT 530
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F+ VLSAC+ GLV EG F SM+ Y++ P EHYAC+VD+LGR+G + EA + I M
Sbjct: 531 FVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKM 590
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
E VWGALL A ++L++ + A+ + +P + YV+LS++Y+ +G+ R+
Sbjct: 591 PLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKM 650
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
VR + +++K PGCSWI L +K+H+F +S I TL+ ++
Sbjct: 651 MVRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLEHLT 700
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 218/487 (44%), Gaps = 80/487 (16%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
++++ + Y K+ ++ AR++FD+MP++ VV+W M+ Y K F + L SM
Sbjct: 31 EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH 90
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
R M + T + + C R R+G +H LV + G + ++G++++ Y +
Sbjct: 91 RSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIG 150
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
EA +VF ++ +R+ V W+ ++ GYV +++A +F +MP +D V+WTT+I+GFS G+
Sbjct: 151 EARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGD 210
Query: 281 -LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
K++E+F +M + T PN+ T V+
Sbjct: 211 GCGKALEIFRLMMRSGETT------------------------------PNEFTFDCVVR 240
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC-------------------- 379
A L+ G +H ++K +E D SI +LV Y +C
Sbjct: 241 ACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNA 300
Query: 380 -----------GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
G + DA +F + E N VSYN MI G+A G +++ LF KM
Sbjct: 301 LNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKM----- 355
Query: 429 VPNQITFLS--VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
P + F S ++S + G +++ F+ K E P + M+ +G E
Sbjct: 356 -PCRTIFSSNTMISVYSRNGEIDKALELFEETKN----EKDPVTWNSMISGYIHSGQPEE 410
Query: 487 AIDL---INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV--VLS 541
A+ L ++ ++ + + AL A +L +L HL++ P + YV L
Sbjct: 411 ALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIK-TPFESNVYVGTSLI 469
Query: 542 DLYSVIG 548
D+YS G
Sbjct: 470 DMYSKCG 476
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
S++ N +S Y+K + A ++F + +R +VS+N+MIS ++++G EAL L M
Sbjct: 30 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 89
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ ++ TF SVLS C + + +G
Sbjct: 90 HRSHMKLSESTFSSVLSVCARLRCLRDG 117
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/625 (34%), Positives = 333/625 (53%), Gaps = 48/625 (7%)
Query: 10 NAMITALINNNCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PA 66
NA+IT + C + E +F MP R+ V++ +I+G + G A E++ M
Sbjct: 182 NAVITLYLR--CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
D V ++L++ +G ++ ++ F+A + D + GS++D Y K G V A
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
IF+ NVV W M+ + +++ F+LF M+ G+ N T + C
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G Q+H L + GF+ D+ + +I MY + G++++A +V M+ ++D VSW S+I+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 243 GYVHNGEIEEAYRLFERMP-------------------------------GKDFVS---- 267
GYV + ++A F+ M + +VS
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSG 479
Query: 268 ----WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
W ++ ++ G + ++ F M KD +T ++SGF + +EEA + F+ M
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMD 539
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ V+ N T S LSASA A + QG QIHA V+K + + N+L+SLY KCG+
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
DA F+ + ERN VS+N++I+ +Q+G G EAL+LF +MK EG+ PN +TF+ VL+AC+
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACS 659
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
HVGLVEEG YFKSM Y I P P+HYAC++DI GRAG L A I M VW
Sbjct: 660 HVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVW 719
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
LL A + H N+++ + AA+HL+ELEP + YV+LS+ Y+V K + ++VR + +
Sbjct: 720 RTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDR 779
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRK 588
+RK PG SWI +K+ VH F G +
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDR 804
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 259/523 (49%), Gaps = 50/523 (9%)
Query: 12 MITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------P 65
++ L + N + A +F + R+ VS+ AM++G+ + G+ EA LY M P
Sbjct: 82 LLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVP 141
Query: 66 ARW-RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
+ SV S+ + GR A + ++ ++ +++ Y + G A +
Sbjct: 142 TPYVLSSVLSSCTKAELFAQGRLIHA-QGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F MP ++ V + ++ G+ + E ++F M+ G++ + +T++ L AC
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
++G Q+H + + G D I+ S++ +Y + G ++ A +F+ + + V WN ++ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF 320
Query: 245 VHNGEIEEAYRLFERMPGKDF-------------------------VSWTTMITGFSSK- 278
++ +++ LF +M + ++ TGF S
Sbjct: 321 GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM 380
Query: 279 -------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
G LEK+ + M+ EKD V+WT++I+G+V +E ++A F EM +
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC 440
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ P+ + L+S +S A + QG QIHA + DVSI N+LV+LY++CG + +A
Sbjct: 441 GIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREA 500
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+ F ++ ++ ++ N ++SGFAQ+GL EEAL +F +M G+ N TF+S LSA ++
Sbjct: 501 FSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560
Query: 446 GLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+++G I+ + +KT ++ E E ++ + G+ GS +A
Sbjct: 561 AEIKQGKQIHARVIKTGHSFE--TEVGNALISLYGKCGSFEDA 601
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 208/483 (43%), Gaps = 83/483 (17%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
+ N LI Y K G A R+FE + +D V+W +M+ GY + G
Sbjct: 78 IVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG--------------- 122
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
E+ L+ M R G+ L+ + +C + + +G +H
Sbjct: 123 ----------------LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIH 166
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ GF +I +GN++IT+Y R G A +VF M RD V++N+LISG+ G E
Sbjct: 167 AQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGE 226
Query: 252 EAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL-------------------- 287
A +FE M D V+ ++++ +S G+L+K +L
Sbjct: 227 HALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLL 286
Query: 288 ---------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
FN + V W ++ F ++F F +M +RPNQ
Sbjct: 287 DLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQF 346
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T +L T ++ G QIH+ VK ESD+ + L+ +YSK G + A R+ +
Sbjct: 347 TYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
E+++VS+ SMI+G+ Q+ ++AL F++M+ G+ P+ I S +S C + + +G
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466
Query: 453 -----IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
IY +I + +V++ R G + EA M E G+ G L
Sbjct: 467 QIHARIYVSGYSGDVSI------WNALVNLYARCGRIREAFSSFEEM--ELKDGITGNGL 518
Query: 508 GAG 510
+G
Sbjct: 519 VSG 521
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)
Query: 153 FDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
LF R + AC G R++ ++H G I+GN +I
Sbjct: 26 LSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLID 85
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTM 271
+Y + G + A +VF +S RD VSW +++SGY NG EEA L+ +M V +
Sbjct: 86 LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYV 145
Query: 272 IT-------------------------GFSSK--------------GNLEKSIELFNMMP 292
++ GF S+ G+ + +F MP
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+D VT+ +ISG E A F EM + P+ +T+SS+L+A A+ L +G+Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H+++ K + SD ++ SL+ LY KCG+V A IF + D N+V +N M+ F Q
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIND 325
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKT 460
++ LF +M+ G+ PNQ T+ +L C ++ G I+ S+KT
Sbjct: 326 LAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 131/240 (54%), Gaps = 11/240 (4%)
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
R GK + +I +S G + + +F + +D+V+W A++SG+ N EEA
Sbjct: 71 RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
+ +M R V P LSSVLS+ QG IHA K S++ + N++++LY +
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG+ A R+F ++ R+ V++N++ISG AQ G GE AL +F +M+ GL P+ +T S+
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250
Query: 439 LSACNHVGLVEEG-----FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
L+AC +G +++G +++ + + Y +E ++D+ + G + A+ + NS
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIME------GSLLDLYVKCGDVETALVIFNS 304
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M + + ++GF+ +E + F + R+ L + L A Q
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 351 -SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
+IHA V + + N L+ LYSK G V+ A R+F + R+ VS+ +M+SG+AQ
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
NGLGEEAL L+R+M G+VP SVLS+C L +G
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG 162
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/624 (33%), Positives = 336/624 (53%), Gaps = 46/624 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP--AR 67
NA++T L + ++ A +IF+ M R+ +SY ++I+G +RG A +L+ M
Sbjct: 252 NALVT-LYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCM 310
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEARE 123
D V +L+S VG + ++ +++ D++ GS++D Y K + A E
Sbjct: 311 KPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHE 370
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
F +NVV W M+ Y ++ + + +FL M+ G+ N T + C
Sbjct: 371 YFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGA 430
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G Q+H V + GF +++ + + +I MY + G +D A + + + D VSW ++I+G
Sbjct: 431 LDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAG 490
Query: 244 YVHNGEIEEAYRLFERMPGKDF-------------------------VSWTTMITGFSSK 278
Y + EA +LF+ M + + + I+G+S
Sbjct: 491 YTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSED 550
Query: 279 --------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
G + + F + KD+++W A+ISGF + EEA + F +M +
Sbjct: 551 LSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQ 610
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
V N T S +SA+A TA + QG QIHA ++K +S+ N L++LYSKCG++ D
Sbjct: 611 AGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIED 670
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A R F + E+N+VS+N+MI+G++Q+G G EA++LF +MK GL+PN +TF+ VLSAC+H
Sbjct: 671 AKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSH 730
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
VGLV EG YF+SM + + P PEHY C+VD+LGRA L A + I M EP +W
Sbjct: 731 VGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWR 790
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LL A H N+++ + AA+HL+ELEP+ + YV+LS++Y+V GK +R R K +
Sbjct: 791 TLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRG 850
Query: 565 IRKSPGCSWIILKDKVHLFLAGRK 588
++K PG SWI +K+ +H F G +
Sbjct: 851 VKKEPGRSWIEVKNSIHAFFVGDR 874
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 248/510 (48%), Gaps = 58/510 (11%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGR 86
+F + ++++VS+ AMI+G + G EA L+ M A ++++S K+
Sbjct: 169 VFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKI-- 226
Query: 87 CEEAARIFEAMVEKDVVAWG---------SMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
E ++ E + +V WG ++V Y + G +I A +IF KM ++ +++
Sbjct: 227 --ELFKLGEQL-HGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYN 283
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
+++ G + + LF M+ M + +T+ L AC +G Q+H V +
Sbjct: 284 SLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKM 343
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G D+I+ S++ +Y + ++ A++ F + V WN ++ Y G + E+Y +F
Sbjct: 344 GMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIF 403
Query: 258 ERM-------------------------------------PGKDFVSW--TTMITGFSSK 278
+M G F + + +I ++
Sbjct: 404 LQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKH 463
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G L+ + + + E+D V+WTA+I+G+ ++ + EA + F EM + +R + + SS +
Sbjct: 464 GELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAI 523
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA A LNQG QIHA D+SI N+LVSLY++CG DAY F ID ++ +
Sbjct: 524 SACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNI 583
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKS 457
S+N++ISGFAQ+G EEAL +F +M G+ N TF S +SA + +++G I+
Sbjct: 584 SWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMM 643
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+KT Y+ E E ++ + + GS+ +A
Sbjct: 644 IKTGYDSE--TEASNVLITLYSKCGSIEDA 671
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 229/483 (47%), Gaps = 51/483 (10%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
ARIF++ + + V ++D Y G V A ++FD +P NV W ++ G +
Sbjct: 34 ARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLAS 93
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
LF M + + T + AC G ++ Q+H + GF ++ N +
Sbjct: 94 QVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPL 153
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-------- 261
I +Y + G +D A VF + +D+VSW ++ISG NG +EA LF +M
Sbjct: 154 IDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTP 213
Query: 262 ------------------GKDF----VSW---------TTMITGFSSKGNLEKSIELFNM 290
G+ V W ++T +S GNL + ++F+
Sbjct: 214 YVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSK 273
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M +D +++ ++ISG + A + F +M ++P+ +T++S+LSA A+ +G
Sbjct: 274 MHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKG 333
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q+H++V+KM M SD+ I+ SL+ LY KC ++ A+ F + N+V +N M+ + Q
Sbjct: 334 KQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQL 393
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPE 469
G E+ +F +M+ EGL+PNQ T+ S+L C +G ++ G I+ + +K+ +
Sbjct: 394 GNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV--- 450
Query: 470 HYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
Y C ++D+ + G L A ++ + E W A++ H DL A +
Sbjct: 451 -YVCSVLIDMYAKHGELDTARGILQRLREEDVVS-WTAMIAGYTQH---DLFAEALKLFQ 505
Query: 528 ELE 530
E+E
Sbjct: 506 EME 508
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 199/419 (47%), Gaps = 71/419 (16%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
VC N LI Y K G + A +FE + KD V+W +M+ G + GR EA +F +M K
Sbjct: 149 VC-NPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQM-HK 206
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+ V T V F+S+ AC + ++ G Q+H
Sbjct: 207 SAVIPTPYV-------------------------FSSV-----LSACTKIELFKLGEQLH 236
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
G + ++G + + N+++T+Y R G + A ++FS M +RD +S+NSLISG G +
Sbjct: 237 GFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSD 296
Query: 252 EAYRLFERMP----GKDFVSWTTMITGFSSKG---------------------------- 279
A +LFE+M D V+ ++++ +S G
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356
Query: 280 -------NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++E + E F ++ V W ++ + E++ F++M + + PNQ
Sbjct: 357 DLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S+L + L+ G QIH V+K + +V + + L+ +Y+K G + A I +
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
E ++VS+ +MI+G+ Q+ L EAL LF++M+++G+ + I F S +SAC + + +G
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG 535
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 156/328 (47%), Gaps = 40/328 (12%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M G+ N T LFE C + ++H + + GFD + +LG+ +I +Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD-------FVSWTTM 271
+D A K+F + + WN +ISG + + LF M ++ F S
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 272 ITG---------------------------------FSSKGNLEKSIELFNMMPEKDDVT 298
+G +S G+++ + +F + KD V+
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISG N + +EA F +M + V P SSVLSA G Q+H +V
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K + S+ + N+LV+LYS+ GN++ A +IF+ + R+ +SYNS+ISG AQ G + AL
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVG 446
LF KM+ + + P+ +T S+LSAC VG
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVG 328
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 7/218 (3%)
Query: 240 LISGYVHNGEIEEAYRLFERM-----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
L G ++G + +A +L R+ G+D + + +I + + G ++ +I+LF+ +P
Sbjct: 16 LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLG-SRLIDIYLAHGEVDNAIKLFDDIPSS 74
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA-SAATATLNQGSQI 353
+ W +ISG + + + F M+ ++V P++ T +SVL A S A QI
Sbjct: 75 NVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQI 134
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
HA ++ S + N L+ LYSK G+V A +F + ++ VS+ +MISG +QNG
Sbjct: 135 HAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRE 194
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+EA+ LF +M ++P F SVLSAC + L + G
Sbjct: 195 DEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG 232
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + +R N T + + +L ++HA + K + + + + L+ +Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
V +A ++F +I N+ +N +ISG L + L LF M E + P++ TF SVL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 442 CN------------HVGLVEEGF 452
C+ H ++ GF
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGF 143
>gi|115476932|ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|215715342|dbj|BAG95093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/561 (38%), Positives = 326/561 (58%), Gaps = 42/561 (7%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAAR-IFEAMVEKDVV 103
IT R G A ++ MP R D+V NAL++ + GR AAR +F+ M ++V+
Sbjct: 23 ITALARAGDVAAARRVFDAMPRR--DAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVI 80
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
+W S++ G G + A F + P +NV +W AM+ G +++ ED LF M
Sbjct: 81 SWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPE-- 138
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
N ++ T + V GL R G + A
Sbjct: 139 --RNVVSYTTM---------------VDGL--------------------ARCGEVASAR 161
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEK 283
++F M R+ VSW ++ISGYV N +EEA +LFE MP K+ V+ T MITG+ +G+L+
Sbjct: 162 ELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQN 221
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ LF+ + KD ++W AIISG+V+N EEA + +I MLR+ ++P+Q TL ++L+A ++
Sbjct: 222 ARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSS 281
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
A L QG HA V+K +ES +SI N+L+++YSKCGNV ++ +F ++ ++IVS+N++
Sbjct: 282 LALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTI 341
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I+ +AQ+G ++ + LF +M+ GL+PN ITFLS+LSAC H G V+E F M + Y
Sbjct: 342 IAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYA 401
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
I P EHYAC+VDIL RAG L +A I M E VWG LL A +TH N+ L +LAA
Sbjct: 402 ISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGNVQLGELAA 461
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ L+ + +S+ YV+LS++Y+ G + NRVR + K K ++K PG SW + DKVH+F
Sbjct: 462 KMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIADKVHMF 521
Query: 584 LAGRKSCLDLKEIEVTLQTIS 604
+ G S ++ I L+ IS
Sbjct: 522 VGGDASHPEMDMILSELRKIS 542
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 179/328 (54%), Gaps = 12/328 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
R AS+NAM+ L+ S+ +A +F MP RN VSY M+ G R G A EL+
Sbjct: 108 RNVASWNAMLAGLVRLG-SMEDARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDA 166
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
MP R + V A+ISGY+ EEA ++FEAM EK+VVA +M+ GYCK+G + AR
Sbjct: 167 MPTR--NLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARR 224
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD + K+V++W A++ GY+ E+ L++ M R G+ + TL L AC
Sbjct: 225 LFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTACSSLAL 284
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
R+G H +V + + I + N+++TMY + G +DE+ VF + +D VSWN++I+
Sbjct: 285 LRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAA 344
Query: 244 YVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT- 298
Y +G ++ LF M + +++ +M++ G +++S++LF++M K ++
Sbjct: 345 YAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISP 404
Query: 299 ----WTAIISGFVNNEQYEEAFRWFIEM 322
+ I+ Q E+A + EM
Sbjct: 405 RAEHYACIVDILSRAGQLEKACSYIKEM 432
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 130/280 (46%), Gaps = 55/280 (19%)
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG-NLEKSI 285
++ S R V N I+ G++ A R+F+ MP +D VSW ++T G +L +
Sbjct: 9 ALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAAR 68
Query: 286 ELFNMMPEKDDVTWTAII-------------------------------SGFVNNEQYEE 314
LF+ MP ++ ++W +II +G V E+
Sbjct: 69 SLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMED 128
Query: 315 AFRWFIEMLRKDV-----------RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM- 362
A F +M ++V R ++ + L + T L + + + V NM
Sbjct: 129 ARSLFDQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNML 188
Query: 363 -----------ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
E +V ++++ Y K G++ +A R+F I ++++S+N++ISG+ NG
Sbjct: 189 EEARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNG 248
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
LGEEA L+ M EG+ P+Q T +++L+AC+ + L+ +G
Sbjct: 249 LGEEATKLYIIMLREGIKPDQATLIALLTACSSLALLRQG 288
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/583 (37%), Positives = 328/583 (56%), Gaps = 52/583 (8%)
Query: 33 MPMRNAVSYAAM--------ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+P+R + S AA I+ R G A ++ MP R D V NAL++ +
Sbjct: 2 LPLRGSASLAARRLLRDNQRISALARAGDVAAARRVFDAMPHR--DVVSWNALLTALWRA 59
Query: 85 GR--CEEAARIF-EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
GR A R+F EAM +DVV+W S++ G G + A F P++NV W AM+
Sbjct: 60 GRHHLPAARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLA 119
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G +++ +D LF M + N ++ T + V GL R
Sbjct: 120 GLLRLGRADDADRLFGEMPK----RNVVSYTTM---------------VDGLARR----- 155
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
G + A +VF M R+ VSW ++ISGYV NG EA +LFE MP
Sbjct: 156 ---------------GEVARAREVFDAMPDRNLVSWAAMISGYVENGMFVEATKLFEAMP 200
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
K+ V+ T MIT + +G++E + LF+ + KD ++W +I+G+V+N EEA R
Sbjct: 201 EKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAV 260
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M R+ V+P+ TL +VL+A +A A L QG HA +K +ES +S N+L+++YSKCGN
Sbjct: 261 MFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGN 320
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
V ++ +F N+ ++IVS+N++I+ +AQ+G ++ + LF +M+ GL+P+ ITFLSVLSA
Sbjct: 321 VGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSA 380
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C HVG V+ F M + Y I P EHYAC+VDIL RAG L +A I M E
Sbjct: 381 CGHVGKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYIKDMPLEAEKN 440
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VWG+LLGA + H N+ L +LAA+ L++ + +S+ PYV+LS++Y+ G N+VR + K
Sbjct: 441 VWGSLLGACQMHGNVQLGELAAKMLVQSDSESSGPYVILSNIYAAAGMWGQVNQVRGQMK 500
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
+ ++K PG SW + ++VH+F+ G S ++++I L+ IS
Sbjct: 501 ERGVKKQPGYSWTEIANEVHMFVGGDASHPEMRKIISELRKIS 543
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 173/328 (52%), Gaps = 12/328 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
R A++NAM+ L+ + +A +F MP RN VSY M+ G RRG A E++
Sbjct: 109 RNVATWNAMLAGLLRLGRA-DDADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDA 167
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
MP R + V A+ISGY++ G EA ++FEAM EK+VVA +M+ YCK+G V AR
Sbjct: 168 MPDR--NLVSWAAMISGYVENGMFVEATKLFEAMPEKNVVACTAMITSYCKQGDVESARR 225
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD + K+V++W M+ GY+ E+ L M R G+ + TL + AC
Sbjct: 226 LFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTACSALAL 285
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
R+G H + + + I N+++TMY + G + E+ VF + +D VSWN++I+
Sbjct: 286 LRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAA 345
Query: 244 YVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT- 298
Y +G+ ++ LF M D +++ ++++ G ++ S++LF++M K ++
Sbjct: 346 YAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSACGHVGKVDASLKLFDLMSSKYAISP 405
Query: 299 ----WTAIISGFVNNEQYEEAFRWFIEM 322
+ I+ Q E+A + +M
Sbjct: 406 RAEHYACIVDILSRAGQLEKASSYIKDM 433
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/659 (33%), Positives = 359/659 (54%), Gaps = 58/659 (8%)
Query: 5 TSASYNAMITALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA--EE 59
+S+S + +LIN C + +A +F + ++ +S+ +I G+ ++G + E
Sbjct: 38 SSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVME 97
Query: 60 LYVNMPARWRDSVCSNA-LISGYLKV---------GRCEEAARIFEAMVEKDVVAWGSMV 109
L+ M A D++ NA SG G+ A I A DV S++
Sbjct: 98 LFQRMRA---DNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACF-YDVFVGSSLL 153
Query: 110 DGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI 169
+ YCK G + EARE+FD+MPE+N V W M+ GY + F++F MRR N
Sbjct: 154 NMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEF 213
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + A G Q+H L + G + + N+++TMY + G +D++ +VF M
Sbjct: 214 AFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMS 273
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGK 263
+ +++++W+++I+GY +G+ +A +LF RM GK
Sbjct: 274 NDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGK 333
Query: 264 DFVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
++ T ++ ++ G E + + FN + + D V WT++I+G+V N
Sbjct: 334 QVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNG 393
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+ E+A + M + + PN+LT++SVL A + A +QG QIHA +K + +V+I +
Sbjct: 394 ENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGS 453
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L ++Y+KCGN+ + +F + ER+I+S+N+MISG +QNG G+EAL LF +M+ + P
Sbjct: 454 ALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKP 513
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+ +TF++VLSAC+H+GLV+ G++YF+ M + + P EHYACMVD+L RAG L EA +
Sbjct: 514 DDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEF 573
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I S T + +W LLGA R + N +L A + LMEL ++ YV+LS +Y+ +G+
Sbjct: 574 IESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRP 633
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
D RVR K++ + K PGCSWI LK VH+F+ G + + EI + +SK K+
Sbjct: 634 EDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKD 692
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 215/411 (52%), Gaps = 41/411 (9%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L+ GR A I A + S+++ Y K + +A+ +FD++ K+V++W +++
Sbjct: 23 LQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLIN 82
Query: 142 GYMKVDCFEDGF--DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
GY + F +LF MR + N+ T + +F A G Q H + +
Sbjct: 83 GYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMAC 142
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
YD+ +G+S++ MY + G + EA +VF M +R+ V+W ++ISGY EA+ +FE
Sbjct: 143 FYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFEL 202
Query: 260 M--------------------------PGKD------------FVS-WTTMITGFSSKGN 280
M GK F+S ++T ++ G+
Sbjct: 203 MRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGS 262
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
L+ S+++F M +K+ +TW+A+I+G+ + +A + F M + P++ TL VL+A
Sbjct: 263 LDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNA 322
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+ + +G Q+H +++K+ ES + I +LV +Y+K G DA + F + + ++V +
Sbjct: 323 CSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLW 382
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
SMI+G+ QNG E+AL+L+ +M+ EG++PN++T SVL AC+++ ++G
Sbjct: 383 TSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQG 433
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 94/174 (54%), Gaps = 10/174 (5%)
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDA 385
+ P L+ + L +L +G +HA ++K+ S + + NSL++ Y+KC ++ A
Sbjct: 3 LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEA--LNLFRKMKDEGLVPNQITFLSVLSACN 443
+F I ++++S+N +I+G++Q G + + LF++M+ + ++PN TF + +A +
Sbjct: 63 KLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAAS 122
Query: 444 HVGLV---EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
++ + ++ M Y++ G + ++++ +AG L EA ++ + M
Sbjct: 123 NLSSIFFGQQAHAVAIKMACFYDVFVG----SSLLNMYCKAGLLFEAREVFDRM 172
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/612 (33%), Positives = 346/612 (56%), Gaps = 49/612 (8%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--------PARWRDSVCSNA 76
+AF +F MP RN V ++A+I G+V+ F E +L+ +M + + S A
Sbjct: 191 DAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCA 250
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+S + K+G + ++ D + + +D Y K R+ +A ++F+ +P ++
Sbjct: 251 GLSAF-KLGT-QLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSY 308
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
A++ GY + D D+F S++R + F+ I+L+ AC R+ EG+Q+HGL +
Sbjct: 309 NAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVK 368
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
G ++I + N+I+ MYG+ G + EA +F M +RDAVSWN++I+ + N EI + L
Sbjct: 369 CGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSL 428
Query: 257 FERM-------------------PGKDFVSWTTMITG--------------------FSS 277
F M G+ +++ T I G +
Sbjct: 429 FVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGK 488
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
G L ++ ++ + EK V+W +IISGF + +Q E A R+F +ML + P+ T ++V
Sbjct: 489 CGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATV 548
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L A AT+ G QIHA ++K+ + SDV I ++LV +YSKCGN+ D+ +F +R+
Sbjct: 549 LDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDY 608
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
V++++MI +A +GLGE+A+NLF +M+ + PN F+SVL AC H+G V++G YF+
Sbjct: 609 VTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQK 668
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
M + Y ++P EHY+CMVD+LGR+G + EA+ LI SM FE +W LL + N++
Sbjct: 669 MLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVE 728
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
+A+ A L++L+P ++ YV+L+++Y+++G + ++R K +++K PGCSWI ++
Sbjct: 729 VAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVR 788
Query: 578 DKVHLFLAGRKS 589
D+VH FL G K+
Sbjct: 789 DEVHTFLVGDKA 800
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 262/570 (45%), Gaps = 90/570 (15%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
AF++F MP R+ +S+ +I G+ G A+ L+ +MP R D V N+L+S YL G
Sbjct: 60 AFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPER--DVVSWNSLLSCYLHNG 117
Query: 86 RCEEAARIFEAM---------------------------------------VEKDVVAWG 106
++ IF M E DVV
Sbjct: 118 VNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGS 177
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
++VD Y K ++ +A +F +MPE+N+V W+A++ GY++ D F +G LF M + GM
Sbjct: 178 ALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGV 237
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T +F +C ++ G Q+HG + F YD I+G + + MY + M +A KVF
Sbjct: 238 SQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVF 297
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITG-------- 274
+ + S+N++I GY + +A +F+ + G D +S + +T
Sbjct: 298 NTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHL 357
Query: 275 ---------------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
+ G L ++ +F M +D V+W AII+
Sbjct: 358 EGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHE 417
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
NE+ + F+ MLR + P+ T SV+ A A LN G++IH ++K M D
Sbjct: 418 QNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWF 477
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ ++LV +Y KCG +++A +I ++E+ VS+NS+ISGF+ E A F +M + G
Sbjct: 478 VGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMG 537
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
++P+ T+ +VL C ++ +E G + L + + +VD+ + G++ ++
Sbjct: 538 IIPDNYTYATVLDVCANMATIELGKQIHAQILKL-QLHSDVYIASTLVDMYSKCGNMQDS 596
Query: 488 IDLINSMTFEPPPG----VWGALLGAGRTH 513
+ FE P W A++ A H
Sbjct: 597 -----RLMFEKAPKRDYVTWSAMICAYAYH 621
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/511 (25%), Positives = 252/511 (49%), Gaps = 49/511 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+N L+ Y K + A ++F+ M ++DV++W +++ GY G + A+ +FD MPE++V
Sbjct: 44 ANCLLQFYCKSSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDV 103
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W +++ Y+ ++F+ MR + + T ++ +AC Y G+QVH L
Sbjct: 104 VSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCL 163
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ GF+ D++ G++++ MY + +D+A +VF M +R+ V W+++I+GYV N E
Sbjct: 164 AIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEG 223
Query: 254 YRLFERMPGKDF-VSWTTMITGFSSKGNLE------------------------------ 282
+LF+ M VS +T + F S L
Sbjct: 224 LKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283
Query: 283 --------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ ++FN +P ++ AII G+ +Q +A F + R ++ ++++L
Sbjct: 284 YAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISL 343
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S L+A + +G Q+H VK + ++ + N+++ +Y KCG +++A IF ++
Sbjct: 344 SGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMER 403
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-I 453
R+ VS+N++I+ QN + L+LF M + P+ T+ SV+ AC + G I
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEI 463
Query: 454 YFKSMKTLYNIE--PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
+ + +K+ ++ G + +VD+ G+ G L EA + I++ E W +++
Sbjct: 464 HGRIIKSGMGLDWFVG----SALVDMYGKCGMLMEA-EKIHARLEEKTTVSWNSIISGFS 518
Query: 512 THLNLDLAKLAAQHLMELE--PDSATPYVVL 540
+ + A+ ++E+ PD+ T VL
Sbjct: 519 SQKQSENAQRYFSQMLEMGIIPDNYTYATVL 549
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+LT S +L + LN G Q+H ++ + + N L+ Y K + A+++F
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ +R+++S+N++I G+A G A +LF M + +V ++ S+LS H G+ +
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVV----SWNSLLSCYLHNGVNRK 121
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F M++L P YA IL
Sbjct: 122 SIEIFVRMRSL----KIPHDYATFAVIL 145
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/639 (34%), Positives = 349/639 (54%), Gaps = 54/639 (8%)
Query: 20 NCSIYEAFEIFATMPMRNAVSYAAMITGFVR----RG---MFYEAEELYVNMPARWRDSV 72
+CSI + F +MP +N VS++A+I G V+ RG +F E ++ V + SV
Sbjct: 226 DCSI----QFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASV 281
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
+ L++G + + DVV + +D Y K + +A+++F+ +P N
Sbjct: 282 FRSCAGLSALRLGS-QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHN 340
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+ ++ A++ GY + D + +F +++ G+ + ++L+ F AC EG+QVHG
Sbjct: 341 LQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHG 400
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
L + +I + N+I+ MYG+ G + EA VF M RDAVSWN++I+ + NG E+
Sbjct: 401 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK 460
Query: 253 AYRLFERM------P---------------------------------GKDFVSWTTMIT 273
LF M P G D +I
Sbjct: 461 TLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALID 520
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+S G +EK+ +L + + E+ V+W AIISGF +Q EEA + F +ML V P+ T
Sbjct: 521 MYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFT 580
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+++L A T+ G QIHA ++K ++SD I ++LV +YSKCGN+ D IF
Sbjct: 581 YATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 640
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
R+ V++N+M+ G+AQ+GLGEEAL +F M+ E + PN TFL+VL AC H+GLVE+G
Sbjct: 641 NRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLH 700
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
YF SM + Y ++P EHY+C+VDI+GR+G +++A++LI M FE +W LL + H
Sbjct: 701 YFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIH 760
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N+++A+ AA +++LEP+ + YV+LS++Y+ G + ++R + ++K PGCSW
Sbjct: 761 GNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSW 820
Query: 574 IILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
I +K +VH FL G K+ KEI L + T E W
Sbjct: 821 IEIKSEVHAFLVGDKAHPRSKEIYENLDVL---TDEMKW 856
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 213/408 (52%), Gaps = 39/408 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+N LI Y+K E A ++F+ M ++D V+W +M+ GY +G + A+++FD MPE++V
Sbjct: 80 TNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDV 139
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W +++ GY+ D+FL M R G F+ T ++ ++C + G+Q+HGL
Sbjct: 140 VSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGL 199
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ GFD D++ G++++ MY + +D + + F M +++ VSW+++I+G V N ++
Sbjct: 200 AVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGG 259
Query: 254 YRLFERMP---------------------------------------GKDFVSWTTMITG 274
LF+ M G D V T +
Sbjct: 260 LELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDM 319
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ NL + +LFN +P + ++ AII G+ +++ EA F + + + ++++L
Sbjct: 320 YMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSL 379
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S A A +G Q+H +K +S++ + N+++ +Y KCG +V+A +F +
Sbjct: 380 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 439
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
R+ VS+N++I+ QNG E+ L+LF M G+ P++ T+ SVL AC
Sbjct: 440 RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKAC 487
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 168/618 (27%), Positives = 280/618 (45%), Gaps = 99/618 (16%)
Query: 10 NAMITALINNNCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
N +I I CS E AF++F MP R+ VS+ AM+ G+ RG A++L+ MP R
Sbjct: 81 NCLIQMYIK--CSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPER- 137
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAM------------------------------- 97
D V N+LISGYL G + +F M
Sbjct: 138 -DVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQI 196
Query: 98 --------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
+ DVV +++D Y K ++ + + F MPEKN V+W+A++ G ++ D
Sbjct: 197 HGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL 256
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
G +LF M++ G+ + T +F +C R G Q+HG + F D+++G +
Sbjct: 257 RGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTAT 316
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDF 265
+ MY + + +A K+F+ + + S+N++I GY + + EA +F + G D
Sbjct: 317 LDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDE 376
Query: 266 VSWT---------------TMITGFSSK--------------------GNLEKSIELFNM 290
VS + + G S K G L ++ +F
Sbjct: 377 VSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEE 436
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M +D V+W AII+ N E+ F+ ML+ + P++ T SVL A A LN G
Sbjct: 437 MVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCG 496
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
+IH ++K + D + +L+ +YSKCG + A ++ + E+ +VS+N++ISGF+
Sbjct: 497 MEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQ 556
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPE 469
EEA F KM + G+ P+ T+ ++L C ++ VE G I+ + +K ++
Sbjct: 557 KQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK--ELQSDAY 614
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPG----VWGALLGAGRTHLNLDLAKLAAQH 525
+ +VD+ + G++ + + FE P W A++ G L L
Sbjct: 615 ISSTLVDMYSKCGNMQDF-----QLIFEKAPNRDFVTWNAMV-CGYAQHGLGEEALKIFE 668
Query: 526 LMELE---PDSATPYVVL 540
M+LE P+ AT VL
Sbjct: 669 YMQLENVKPNHATFLAVL 686
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 31/142 (21%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S + + L G Q HA ++ + V + N L+ +Y KC ++ A+++F +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 393 DERNIVSYNSM-------------------------------ISGFAQNGLGEEALNLFR 421
+R+ VS+N+M ISG+ NG + +++F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 422 KMKDEGLVPNQITFLSVLSACN 443
+M G V ++ TF VL +C+
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCS 185
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/624 (34%), Positives = 329/624 (52%), Gaps = 46/624 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--VNMPAR 67
NA+I+ + S A +F M ++V++ +I+G + G A ++ + +
Sbjct: 182 NALISLYLRCR-SFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGL 240
Query: 68 WRDSVCSNALISGYLKVGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
DSV +L++ VG + ++ +A + D + GS++D Y K G + EA +
Sbjct: 241 SPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQ 300
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
IFD NVV W M+ Y ++D FD+F M G+ N T + C
Sbjct: 301 IFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGE 360
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G Q+H L + GF D+ + +I MY + G++D+A ++ M+ ++D VSW S+I+G
Sbjct: 361 IGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAG 420
Query: 244 YVHNGEIEEAYRLFERMPG---------------------------------------KD 264
YV + +EA F+ M D
Sbjct: 421 YVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSAD 480
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
W ++ ++ G +++ F + K+ +TW +ISGF + YEEA + F++M +
Sbjct: 481 VSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQ 540
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ N T S +SASA A + QG QIHA V+K S+ I N+L+SLY KCG++ D
Sbjct: 541 AGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIED 600
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A F + +RN VS+N++I+ +Q+G G EAL+LF +MK +GL P+ +TF+ VL+AC+H
Sbjct: 601 AKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSH 660
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
VGLVEEG YFKSM + I P P+HYAC+VDILGRAG L A + M VW
Sbjct: 661 VGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWR 720
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LL A + H NL++ + AA+HL+ELEP + YV+LS+ Y+V GK +++R K +
Sbjct: 721 TLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRG 780
Query: 565 IRKSPGCSWIILKDKVHLFLAGRK 588
+RK PG SWI +K+ VH F G +
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDR 804
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 190/419 (45%), Gaps = 70/419 (16%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
+ N LI Y K G A R+FE + +D V+W +++ GY + G
Sbjct: 78 IIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG--------------- 122
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
E+ L+ M R G+ L+ + AC + ++ G +H
Sbjct: 123 ----------------LGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIH 166
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
V + GF + +GN++I++Y R A++VF M D+V++N+LISG+ G +
Sbjct: 167 VQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGD 226
Query: 252 EAYRLFERM--------------------------PGK-------------DFVSWTTMI 272
A +F+ M GK D++ +++
Sbjct: 227 RALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLL 286
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
+ G++E+++++F+ + V W ++ + + ++F F ML VRPN+
Sbjct: 287 DLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKF 346
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T +L T + G QIH+ +K +SD+ + L+ +YSK G + A RI I
Sbjct: 347 TYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMI 406
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+E+++VS+ SMI+G+ Q+ +EAL F++M+ G+ P+ I S +SAC + V +G
Sbjct: 407 EEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQG 465
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 167/364 (45%), Gaps = 40/364 (10%)
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYRE 186
M + ++ + G++ D E LF + R M ++ AC G R+
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
++H G I+GN +I +Y + GF+ A +VF +S RD VSW +++SGY
Sbjct: 61 VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMIT-------------------------GFSSK--- 278
NG EEA RL+ M V +++ GF S+
Sbjct: 121 NGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFV 180
Query: 279 GNLEKSIEL-----------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
GN S+ L F M D VT+ +ISG + A F EM +
Sbjct: 181 GNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGL 240
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ +T++S+L+A +A L +G Q+H++++K M D ++ SL+ LY K G++ +A +
Sbjct: 241 SPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQ 300
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
IF + D N+V +N M+ + Q ++ ++F +M G+ PN+ T+ +L C H G
Sbjct: 301 IFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGE 360
Query: 448 VEEG 451
+ G
Sbjct: 361 IGLG 364
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 127/228 (55%), Gaps = 11/228 (4%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I ++ KG + ++ +F + +D+V+W A++SG+ N EEA R + EM R V P
Sbjct: 83 LIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPT 142
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
LSS+LSA T G IH V K S+ + N+L+SLY +C + A R+F
Sbjct: 143 PYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFC 202
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
++ + V++N++ISG AQ G G+ AL +F +M+ GL P+ +T S+L+AC+ VG + +
Sbjct: 203 DMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRK 262
Query: 451 G-----FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
G ++ M Y +E ++D+ ++G + EA+ + +S
Sbjct: 263 GKQLHSYLLKAGMSLDYIME------GSLLDLYVKSGDIEEALQIFDS 304
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/542 (35%), Positives = 310/542 (57%), Gaps = 30/542 (5%)
Query: 74 SNALISGYLKVGRCE---EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
SNALI+ Y+K E +A ++ + M +KD + W +MV GY ++G V AR +F+++
Sbjct: 201 SNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDG 260
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K V W AM+ GY++ D F+LF M + + T T + AC + G V
Sbjct: 261 KFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSV 320
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG + R + F+ EA + N+L++ Y G+I
Sbjct: 321 HGQIIRL-----------------QPNFVPEAALPVN----------NALVTLYSKGGKI 353
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
A R+F+ M KD VSW T+++G+ G L+K++E+F +MP K+D++W ++SG+V+
Sbjct: 354 VIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGG 413
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
E+A + F +M +DV+P T + ++A L G Q+HAH+V+ E+ S N
Sbjct: 414 LSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGN 473
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+++Y+KCG V DA +F + + VS+N+MIS Q+G G EAL LF +M EG+ P
Sbjct: 474 ALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDP 533
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
++I+FL++L+ACNH GLV+EGF YF+SMK + I PG +HYA ++D+LGR+G + EA DL
Sbjct: 534 DRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 593
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I +M FEP P +W A+L RT+ +++ AA L + P Y++LS+ YS G+
Sbjct: 594 IKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRW 653
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEF 610
D RVR + + ++K PGCSWI + K+H+FL G + +E+ L+ I ++
Sbjct: 654 VDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKL 713
Query: 611 DW 612
+
Sbjct: 714 GY 715
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 186/387 (48%), Gaps = 42/387 (10%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMP--EKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGG 163
S+V GR+ +A FD +P ++ V AM+ + + +F ++ G
Sbjct: 97 SLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGS 156
Query: 164 MAFNSITLTILFEACGRFFRYR--EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+ + + T L A G+ Q+H V + G + + N++I +Y
Sbjct: 157 LRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALY-------- 208
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNL 281
M SW +A ++ + MP KD ++WTTM+ G+ +G++
Sbjct: 209 ------MKCDTPEASW--------------DARKVLDEMPDKDDLTWTTMVVGYVRRGDV 248
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ +F + K DV W A+ISG+V + +AF F M+ + V ++ T +SVLSA
Sbjct: 249 NAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSAC 308
Query: 342 AATATLNQGSQIHAHVVKMN----MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
A G +H ++++ E+ + + N+LV+LYSK G +V A RIF ++ +++
Sbjct: 309 ANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDV 368
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
VS+N+++SG+ +G ++A+ +F+ M + N ++++ ++S H GL E+ F
Sbjct: 369 VSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSEDALKLFNQ 424
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSL 484
M+ +++P YA + G G+L
Sbjct: 425 MRA-EDVKPCDYTYAGAIAACGELGAL 450
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 195/412 (47%), Gaps = 32/412 (7%)
Query: 9 YNAMITALINNN-CSIYEAFEIFATM-----PMRNAVSYAAMITGFVRRGMFYEAEELYV 62
+NAMI+ + + C+ +AFE+F M P+ + ++ ++++ G F + ++
Sbjct: 266 WNAMISGYVQSGMCA--DAFELFRRMVSEKVPL-DEFTFTSVLSACANAGFFVHGKSVHG 322
Query: 63 NMPARWRDSV------CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
+ + V +NAL++ Y K G+ A RIF+ M KDVV+W +++ GY G
Sbjct: 323 QIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSG 382
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
+ +A E+F MP KN ++W MV GY+ ED LF MR + T
Sbjct: 383 CLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIA 442
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
ACG + G Q+H + + GF+ GN+++TMY + G +++A VF +M D+VS
Sbjct: 443 ACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVS 502
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM- 291
WN++IS +G EA LF++M + D +S+ T++T + G +++ F M
Sbjct: 503 WNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMK 562
Query: 292 ------PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
P +D + +I + + EA R I+ + P ++LS
Sbjct: 563 RDFGISPGEDH--YARLIDLLGRSGRIGEA-RDLIKTM--PFEPTPSIWEAILSGCRTNG 617
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+ G+ + +M + D L + YS G VDA R+ + +R +
Sbjct: 618 DMEFGAYAADQLFRMIPQHD-GTYILLSNTYSAAGRWVDAARVRKLMRDRGV 668
>gi|297605437|ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group]
gi|255676854|dbj|BAF19125.2| Os06g0228900 [Oryza sativa Japonica Group]
Length = 695
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/630 (33%), Positives = 351/630 (55%), Gaps = 32/630 (5%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGF---VRRGMFYEAEEL 60
R+ ++N+++ L + E F MP+R+AVS+ ++ + A L
Sbjct: 29 RSVVTWNSLLAGLARRPDARAAR-EFFDAMPVRDAVSWNTLLAAYSASPHPDHLAAARRL 87
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R D V N L+ Y + G +EA R+F+ M +++ +W +MV G+ G+V++
Sbjct: 88 FDEMPQR--DVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASWNTMVTGFFAAGQVVK 145
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS------MRRGGMAFNSITLTIL 174
A ++FD MP K+ + + MV G+ K + +L M + A+N TL +
Sbjct: 146 ALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYN--TLIVA 203
Query: 175 FEACGRFFRYR-------EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ GRF + +G H ++ R GF+ +++ NS++ Y + G + A +F+
Sbjct: 204 YGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFN 263
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
M +D VSWN++ISGY +++E+ +LF MP D VSW +I GF KG E +
Sbjct: 264 EMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGF 323
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ MPE+ ++W +ISG+ N Y + + F +ML P++ T SSVL+A A+ L
Sbjct: 324 FDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPML 383
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISG 406
G+QIH +V+ + D +I N+L+++YS+CG + DA IF + ++++VS+N++I
Sbjct: 384 GLGAQIH-QLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGC 442
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+ +G +AL LF++M+ ++P ITF+S+LSAC + GLV EG + F +M Y I
Sbjct: 443 YEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVA 502
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL 526
EHYA +V+++GR G L +A+++INSM P VWGA LGA N LA++AA+ L
Sbjct: 503 RIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGACTAKKNEPLAQMAAKEL 562
Query: 527 MELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ PDS+ PYV++ +L++ GK VR + + + I K PG SWI L+ K+H+F++G
Sbjct: 563 STINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLEGKMHVFISG 622
Query: 587 RKSCLDLKEIEVTLQTISKGTKEFDWPKHD 616
+ +EI L+ DW H+
Sbjct: 623 DTWHPNAQEIFSVLE---------DWQWHN 643
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 53/264 (20%)
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYV----------------------------- 245
R G A ++F + R V+WNSL++G
Sbjct: 12 RAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLAA 71
Query: 246 -----HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
H + A RLF+ MP +D V+W T++ ++ +G ++++ LF+ MP+++ +W
Sbjct: 72 YSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASWN 131
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+++GF Q +A F M KD +LS+++S L++ ++ + +
Sbjct: 132 TMVTGFFAAGQVVKALDVFDAMPAKD----SASLSTMVSGFTKNGMLHEAEELLTKRLSV 187
Query: 361 -NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID--------------ERNIVSYNSMIS 405
+M+ V N+L+ Y + G DA R+F I ERN+VS+NSM+
Sbjct: 188 TDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMI 247
Query: 406 GFAQNGLGEEALNLFRKMKDEGLV 429
+ + G A LF +M D+ LV
Sbjct: 248 CYIKAGDVCSARALFNEMPDKDLV 271
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 97/188 (51%), Gaps = 11/188 (5%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N ++ + G A RLF+ +P + V+W +++ G + + + + E F+ MP +D V
Sbjct: 4 NRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAV 63
Query: 298 TWTAIISGF---VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
+W +++ + + + A R F EM ++DV +T +++L A A +++ ++
Sbjct: 64 SWNTLLAAYSASPHPDHLAAARRLFDEMPQRDV----VTWNTLLGAYARRGLMDEARRLF 119
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+ + N S N++V+ + G VV A +F + ++ S ++M+SGF +NG+
Sbjct: 120 DEMPQRNAAS----WNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLH 175
Query: 415 EALNLFRK 422
EA L K
Sbjct: 176 EAEELLTK 183
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/542 (35%), Positives = 310/542 (57%), Gaps = 30/542 (5%)
Query: 74 SNALISGYLKVGRCE---EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
SNALI+ Y+K E +A ++ + M +KD + W +MV GY ++G V AR +F+++
Sbjct: 203 SNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDG 262
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K V W AM+ GY++ D F+LF M + + T T + AC + G V
Sbjct: 263 KFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSV 322
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG + R + F+ EA + N+L++ Y G+I
Sbjct: 323 HGQIIRL-----------------QPNFVPEAALPVN----------NALVTLYSKGGKI 355
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
A R+F+ M KD VSW T+++G+ G L+K++E+F +MP K+D++W ++SG+V+
Sbjct: 356 VIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGG 415
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
E+A + F +M +DV+P T + ++A L G Q+HAH+V+ E+ S N
Sbjct: 416 LSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGN 475
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+++Y+KCG V DA +F + + VS+N+MIS Q+G G EAL LF +M EG+ P
Sbjct: 476 ALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDP 535
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
++I+FL++L+ACNH GLV+EGF YF+SMK + I PG +HYA ++D+LGR+G + EA DL
Sbjct: 536 DRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 595
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I +M FEP P +W A+L RT+ +++ AA L + P Y++LS+ YS G+
Sbjct: 596 IKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRW 655
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEF 610
D RVR + + ++K PGCSWI + K+H+FL G + +E+ L+ I ++
Sbjct: 656 VDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKL 715
Query: 611 DW 612
+
Sbjct: 716 GY 717
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 195/409 (47%), Gaps = 42/409 (10%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKNVVAWTAMVDGYMKVDC 148
A +F + + VA S+V + GR+ +A FD +P ++ V AM+ + +
Sbjct: 83 AALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASL 142
Query: 149 FEDGFDLFLSMR-RGGMAFNSITLTILFEACGRFFRYR--EGVQVHGLVSRFGFDYDIIL 205
+F ++ G + + + T L A G+ Q+H V + G + +
Sbjct: 143 AAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSV 202
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
N++I +Y M SW +A ++ + MP KD
Sbjct: 203 SNALIALY--------------MKCDTPEASW--------------DARKVLDEMPDKDD 234
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
++WTTM+ G+ +G++ + +F + K DV W A+ISG+V + +AF F M+ +
Sbjct: 235 LTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSE 294
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN----MESDVSIQNSLVSLYSKCGN 381
V ++ T +SVLSA A G +H ++++ E+ + + N+LV+LYSK G
Sbjct: 295 KVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGK 354
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+V A RIF ++ +++VS+N+++SG+ +G ++A+ +F+ M + N ++++ ++S
Sbjct: 355 IVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSG 410
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
H GL E+ F M+ +++P YA + G G+L L
Sbjct: 411 YVHGGLSEDALKLFNQMRA-EDVKPCDYTYAGAIAACGELGALKHGRQL 458
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 195/412 (47%), Gaps = 32/412 (7%)
Query: 9 YNAMITALINNN-CSIYEAFEIFATM-----PMRNAVSYAAMITGFVRRGMFYEAEELYV 62
+NAMI+ + + C+ +AFE+F M P+ + ++ ++++ G F + ++
Sbjct: 268 WNAMISGYVQSGMCA--DAFELFRRMVSEKVPL-DEFTFTSVLSACANAGFFVHGKSVHG 324
Query: 63 NMPARWRDSV------CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
+ + V +NAL++ Y K G+ A RIF+ M KDVV+W +++ GY G
Sbjct: 325 QIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSG 384
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
+ +A E+F MP KN ++W MV GY+ ED LF MR + T
Sbjct: 385 CLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIA 444
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
ACG + G Q+H + + GF+ GN+++TMY + G +++A VF +M D+VS
Sbjct: 445 ACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVS 504
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM- 291
WN++IS +G EA LF++M + D +S+ T++T + G +++ F M
Sbjct: 505 WNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMK 564
Query: 292 ------PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
P +D + +I + + EA R I+ + P ++LS
Sbjct: 565 RDFGISPGEDH--YARLIDLLGRSGRIGEA-RDLIKTM--PFEPTPSIWEAILSGCRTNG 619
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+ G+ + +M + D L + YS G VDA R+ + +R +
Sbjct: 620 DMEFGAYAADQLFRMIPQHD-GTYILLSNTYSAAGRWVDAARVRKLMRDRGV 670
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/629 (33%), Positives = 339/629 (53%), Gaps = 71/629 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------SVCS- 74
A ++F MP R VS+ MI+ + + G F EA L +M SVC+
Sbjct: 91 ARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCAR 150
Query: 75 --------------------------NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
+AL+ Y EA R+F+ +V ++ V W M
Sbjct: 151 LRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLM 210
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV-DCFEDGFDLF-LSMRRGGMAF 166
+ GY + +A +F KMP ++VVAWT ++ G+ K D ++F L MR G
Sbjct: 211 LVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTP 270
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR----------- 215
N T + ACGR G VHGL+ + G +YD +G +++ Y
Sbjct: 271 NEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVC 330
Query: 216 --------------------LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+G +++A VF+ M++ + VS+N +I GY G+++++ R
Sbjct: 331 KGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKR 390
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISGFVNNEQYEE 314
LFE+MP + S TMI+ +S G ++K++ELF EKD VTW ++ISG++++ Q EE
Sbjct: 391 LFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEE 450
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A + +I M R ++ + T S++ A + +L QG +HAH++K ES+V + SL+
Sbjct: 451 ALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLID 510
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSKCG++++A F +I N+ ++ ++I+G A +GLG EA++LF M ++GL PN T
Sbjct: 511 MYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGAT 570
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F+ VLSAC+ GLV EG F SM+ Y++ P EHYAC+VD+LGR+G + EA + I M
Sbjct: 571 FVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKM 630
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
E VWGALL A ++L++ + A+ + +P + YV+LS++Y+ +G+ R+
Sbjct: 631 PLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKM 690
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
VR + +++K PGCSWI L +K+H+F
Sbjct: 691 MVRKILRGFKVKKDPGCSWIELNNKIHVF 719
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 218/487 (44%), Gaps = 80/487 (16%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
++++ + Y K+ ++ AR++FD+MP++ VV+W M+ Y K F + L SM
Sbjct: 71 EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH 130
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
R M + T + + C R R+G +H LV + G + ++G++++ Y +
Sbjct: 131 RSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIG 190
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
EA +VF ++ +R+ V W+ ++ GYV +++A +F +MP +D V+WTT+I+GFS G+
Sbjct: 191 EARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGD 250
Query: 281 -LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
K++E+F +M + T PN+ T V+
Sbjct: 251 GCGKALEMFRLMMRSGETT------------------------------PNEFTFDCVVR 280
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC-------------------- 379
A L+ G +H ++K +E D SI +LV Y +C
Sbjct: 281 ACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNA 340
Query: 380 -----------GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
G + DA +F + E N VSYN MI G+A G +++ LF KM
Sbjct: 341 LNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKM----- 395
Query: 429 VPNQITFLS--VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
P + F S ++S + G +++ F+ K E P + M+ +G E
Sbjct: 396 -PCRTIFSSNTMISVYSRNGEIDKALELFEETKN----EKDPVTWNSMISGYIHSGQPEE 450
Query: 487 AIDL---INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV--VLS 541
A+ L ++ ++ + + AL A +L +L HL++ P + YV L
Sbjct: 451 ALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIK-TPFESNVYVGTSLI 509
Query: 542 DLYSVIG 548
D+YS G
Sbjct: 510 DMYSKCG 516
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
S++ N +S Y+K + A ++F + +R +VS+N+MIS ++++G EAL L M
Sbjct: 70 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 129
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ ++ TF SVLS C + + +G
Sbjct: 130 HRSHMKLSESTFSSVLSVCARLRCLRDG 157
>gi|51535392|dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51535558|dbj|BAD37476.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 908
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/630 (33%), Positives = 351/630 (55%), Gaps = 32/630 (5%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGF---VRRGMFYEAEEL 60
R+ ++N+++ L + E F MP+R+AVS+ ++ + A L
Sbjct: 65 RSVVTWNSLLAGLARRPDARAAR-EFFDAMPVRDAVSWNTLLAAYSASPHPDHLAAARRL 123
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R D V N L+ Y + G +EA R+F+ M +++ +W +MV G+ G+V++
Sbjct: 124 FDEMPQR--DVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASWNTMVTGFFAAGQVVK 181
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS------MRRGGMAFNSITLTIL 174
A ++FD MP K+ + + MV G+ K + +L M + A+N TL +
Sbjct: 182 ALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYN--TLIVA 239
Query: 175 FEACGRFFRYR-------EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ GRF + +G H ++ R GF+ +++ NS++ Y + G + A +F+
Sbjct: 240 YGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFN 299
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
M +D VSWN++ISGY +++E+ +LF MP D VSW +I GF KG E +
Sbjct: 300 EMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGF 359
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ MPE+ ++W +ISG+ N Y + + F +ML P++ T SSVL+A A+ L
Sbjct: 360 FDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPML 419
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISG 406
G+QIH +V+ + D +I N+L+++YS+CG + DA IF + ++++VS+N++I
Sbjct: 420 GLGAQIH-QLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGC 478
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+ +G +AL LF++M+ ++P ITF+S+LSAC + GLV EG + F +M Y I
Sbjct: 479 YEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVA 538
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL 526
EHYA +V+++GR G L +A+++INSM P VWGA LGA N LA++AA+ L
Sbjct: 539 RIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGACTAKKNEPLAQMAAKEL 598
Query: 527 MELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ PDS+ PYV++ +L++ GK VR + + + I K PG SWI L+ K+H+F++G
Sbjct: 599 STINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLEGKMHVFISG 658
Query: 587 RKSCLDLKEIEVTLQTISKGTKEFDWPKHD 616
+ +EI L+ DW H+
Sbjct: 659 DTWHPNAQEIFSVLE---------DWQWHN 679
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 53/276 (19%)
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV----------------- 245
++ N + R G A ++F + R V+WNSL++G
Sbjct: 36 VMRHNRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPV 95
Query: 246 -----------------HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
H + A RLF+ MP +D V+W T++ ++ +G ++++ LF
Sbjct: 96 RDAVSWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLF 155
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ MP+++ +W +++GF Q +A F M KD +LS+++S L+
Sbjct: 156 DEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKD----SASLSTMVSGFTKNGMLH 211
Query: 349 QGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-------------- 393
+ ++ + + +M+ V N+L+ Y + G DA R+F I
Sbjct: 212 EAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGF 271
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
ERN+VS+NSM+ + + G A LF +M D+ LV
Sbjct: 272 ERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLV 307
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 333/614 (54%), Gaps = 54/614 (8%)
Query: 15 ALINNNCSIY---------EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
+L + NC IY A + F MP R++VS+ +I+ F G+ ++ +V M
Sbjct: 58 SLFSWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEM- 116
Query: 66 ARWRDSVCSNALISGYLKVGRCEE----------AARIFEAMVEKDVVAWGSMVDGYCKK 115
W N++ + + C ARI DV+ +VD Y K
Sbjct: 117 --WIQGCQPNSMTYASV-LSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKC 173
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + ++ +F+ + E NVV WT+++ G E+ +D+F MR+ + ++ L +
Sbjct: 174 GLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATIL 233
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
C G Q+HG + G + + +GN+ ++MY + G
Sbjct: 234 GVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCG------------------ 275
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
+ E+A FE M D +SWTTMIT FS GN+E++ + FN MPE++
Sbjct: 276 -------------DFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERN 322
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
++W A++ + N +EE + +I MLR++VRP+ +T +++ A + A G+QI +
Sbjct: 323 VISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILS 382
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
VK+ + SDVS+ NS ++LYS+CG + +A +F +I E+N++S+NS++ G+AQNG G +
Sbjct: 383 QAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMK 442
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
+ +F+ M G P+ IT++++LS C+H GLV+E +F SM + I EH+ CMV
Sbjct: 443 VIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMV 502
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D+ GRAG L A+D+I+ M F+P +WGALL A R H + ++A+LA ++L+EL ++
Sbjct: 503 DLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEMAELAMKNLLELNTENFE 562
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
Y++L++ YS G+ + VR K KR++K PGCSWI + ++VH+F A S +K+
Sbjct: 563 SYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIEVCNRVHVFTANDTSHPQVKD 622
Query: 596 IEVTLQTISKGTKE 609
I L+ I K K+
Sbjct: 623 IYKALEDIVKKIKD 636
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 133/266 (50%), Gaps = 31/266 (11%)
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
AC R Q+HGL ++GF + ++ NSII MY K DA
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMY----------------IKCDA-- 43
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I A ++F R+ SW MI G+S + ++I+ F MPE+D
Sbjct: 44 -------------IYAAEQVFLRIEKPSLFSWNCMIYGYSKLHEMGRAIDTFRQMPERDS 90
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+W IIS F ++ + ++ F+EM + +PN +T +SVLSA A G +HA
Sbjct: 91 VSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVLSACANIYDFQWGKHLHAR 150
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+V++ DV + N LV +Y+KCG + + R+F + E N+V++ S+ISG A G EE
Sbjct: 151 IVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEV 210
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSAC 442
++F +M+ + ++ + ++L C
Sbjct: 211 YDIFYQMRKDCVIMDNFILATILGVC 236
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/621 (33%), Positives = 341/621 (54%), Gaps = 70/621 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M S+ A+I+ + + E+ F P +N VS+ A I+G+V+ G EA +L
Sbjct: 113 MPQTNEISWTALISGFMKYG-RVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKL 171
Query: 61 YVNM------PAR-------------------------------WRDSVCSNALISGYLK 83
++ + P + D SN+LI+ L+
Sbjct: 172 FIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLR 231
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
+G A +F+ M EKDVV+W +++D Y + + EAR IFD+MP++N V+W+AM+ Y
Sbjct: 232 MGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARY 291
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
+ E+ LF M + G N + + A + G+ +HG V++ GF+ D+
Sbjct: 292 CQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDV 351
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+ +S+I MY + GE ++ LF+ + K
Sbjct: 352 FVSSSLIDMYCKC-------------------------------GETKDGRFLFDTILEK 380
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ VSW M+ G+S G++E++ LFN+MP +++V+W+AII+G ++ EQ++E F F EM+
Sbjct: 381 NMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMI 440
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
PN+ T SS+L A A+TA+L++G +H +VK+ ++ D + +L +Y+K G++
Sbjct: 441 LLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIE 500
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSAC 442
+ ++F + ++N VS+ +MI G A++GL EE+L LF +M K + PN++ FL+VL AC
Sbjct: 501 SSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFAC 560
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLV++G YF SM+ +Y ++P H+ C+VD+L RAG L EA + I SM F+P
Sbjct: 561 SHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNA 620
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W ALL +T+ N +LA+ A L E+ + YV+LS++Y+ G+ RD +VR K
Sbjct: 621 WAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKA 680
Query: 563 KRIRKSPGCSWIILKDKVHLF 583
K ++KS GCSW+ ++D+VH F
Sbjct: 681 KGLKKSGGCSWVEIRDRVHSF 701
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 210/413 (50%), Gaps = 62/413 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V N +IS ++ G +EA ++F+ M + + ++W +++ G+ K GRV E+ F++ P
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNP 145
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+NVV+WTA + GY++ + LF+ + + N +T T + AC + G+
Sbjct: 146 FQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMS 205
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
V GL+ + G+++D+ + NS+IT+ R+G + A +VF M ++D VSW +++ YV E
Sbjct: 206 VLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDE 265
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+ EA R+F+ MP ++ VSW+ MI + G P
Sbjct: 266 LGEARRIFDEMPQRNEVSWSAMIARYCQSG-----------YP----------------- 297
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
EE+ R F M+++ +PN SS+LSA A+ L G IH HV K+ E DV +
Sbjct: 298 ---EESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVS 354
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK----- 424
+SL+ +Y KCG D +F I E+N+VS+N+M+ G++ NG EEA LF M
Sbjct: 355 SSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNV 414
Query: 425 ---------------DE-----------GLVPNQITFLSVLSACNHVGLVEEG 451
DE G +PN+ TF S+L AC +++G
Sbjct: 415 SWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKG 467
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 152/298 (51%), Gaps = 31/298 (10%)
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R+G +H + + G + + ++ MY EA+++ D V N +IS
Sbjct: 38 RDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISAN 97
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
V G ++EA +LF+ MP + +SWT +I+GF G + +S+ F P ++ V+WTA IS
Sbjct: 98 VQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAIS 157
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G+V N EA + FI++L +V+PN++T +SV+ A A G + +VK E
Sbjct: 158 GYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEH 217
Query: 365 DVSIQNSLVSLYSKCGN---------------------VVDAY----------RIFTNID 393
D+++ NSL++L + G ++D Y RIF +
Sbjct: 218 DLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMP 277
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+RN VS+++MI+ + Q+G EE+L LF +M EG PN F S+LSA V ++ G
Sbjct: 278 QRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAG 335
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 62/176 (35%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMES---------------------------- 364
T S+L + GS +HAH+ K + S
Sbjct: 23 TCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDF 82
Query: 365 ---DVSIQNSLVSLYSKCGNVVDAYRIFTNIDE--------------------------- 394
D+ + N ++S + GN+ +A ++F + +
Sbjct: 83 DGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFE 142
Query: 395 ----RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+N+VS+ + ISG+ QNG EA+ LF K+ + + PN++TF SV+ AC ++G
Sbjct: 143 RNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLG 198
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/642 (32%), Positives = 351/642 (54%), Gaps = 52/642 (8%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNMP--ARWRDSVCSNALI-----SGYLKVGRCE 88
R+ VS++AM++ F M ++A +++M + + C A+I + Y VG
Sbjct: 91 RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEII 150
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCK-KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
+ +E DV ++D + K G + A ++FDKMPE+N+V WT M+ + ++
Sbjct: 151 YGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLG 210
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
C D DLFL M G + T + + AC G Q+H V R G D+ +G
Sbjct: 211 CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGC 270
Query: 208 SIITMYGRL---GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE-EAYRLFERM--- 260
S++ MY + G +D++ KVF M + + +SW ++I+ YV +GE + EA LF +M
Sbjct: 271 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 330
Query: 261 -----------------------PGKDFVSWT-------------TMITGFSSKGNLEKS 284
G+ S+ ++I+ ++ G +E +
Sbjct: 331 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+ F+++ EK+ V++ AI+ G+ N + EEAF F E+ + + T +S+LS +A+
Sbjct: 391 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 450
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+ +G QIH ++K +S+ I N+L+S+YS+CGN+ A+++F +++RN++S+ SMI
Sbjct: 451 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 510
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
+GFA++G AL +F KM + G PN+IT+++VLSAC+HVG++ EG +F SM + I
Sbjct: 511 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 570
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
P EHYACMVD+LGR+G L EA++ INSM VW LLGA R H N +L + AA+
Sbjct: 571 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAE 630
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
++E EPD Y++LS+L++ G+ +D ++R K + + K GCSWI ++++VH F
Sbjct: 631 MILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFH 690
Query: 585 AGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
G S +I L ++ KE + P D+ L +E +
Sbjct: 691 VGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEE 732
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 233/527 (44%), Gaps = 90/527 (17%)
Query: 23 IYEAFEIFATMPMRNA----VSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNA 76
++ AF M +NA +Y+ ++ +R F + ++ + DSV N
Sbjct: 7 LHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT 66
Query: 77 LISGYLKVGRCEEAARIFEAMVEK-DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
LIS Y K G E A IFE M K D+V+W +MV C +E + I
Sbjct: 67 LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVS--CFANNSMEWQAI----------- 113
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT FL M G N + AC G ++G V
Sbjct: 114 WT------------------FLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVV 155
Query: 196 RFGF-DYDIILGNSIITMYGR-LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G+ + D+ +G +I M+ + G + A KVF M +R+ V+W +I+ + G +A
Sbjct: 156 KTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA 215
Query: 254 YRLFERMPGKDFV------------------------------------------SWTTM 271
LF M +V S M
Sbjct: 216 IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 275
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN-EQYEEAFRWFIEMLRKDVRPN 330
++ G+++ S ++F MPE + ++WTAII+ +V + E +EA F +M+ +RPN
Sbjct: 276 YAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPN 335
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ SSVL A + G Q++++ VK+ + S + NSL+S+Y++ G + DA + F
Sbjct: 336 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD 395
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ E+N+VSYN+++ G+A+N EEA LF ++ D G+ + TF S+LS +G + +
Sbjct: 396 ILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK 455
Query: 451 G-FIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSM 494
G I+ + +K Y C ++ + R G++ A + N M
Sbjct: 456 GEQIHGRLLKGGYK----SNQCICNALISMYSRCGNIEAAFQVFNEM 498
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 180/414 (43%), Gaps = 52/414 (12%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM---PMR-NAVSYAAMITGFVRRGMFYE 56
M + S+ A+ITA + + EA E+F M +R N S+++++ Y
Sbjct: 295 MPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 354
Query: 57 AEELYVNMPARWRDSV--CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
E++Y SV N+LIS Y + GR E+A + F+ + EK++V++ ++VDGY K
Sbjct: 355 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 414
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
+ E+ F LF + G+ ++ T L
Sbjct: 415 NLKS-------------------------------EEAFLLFNEIADTGIGISAFTFASL 443
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
+G Q+HG + + G+ + + N++I+MY R G ++ A +VF+ M R+
Sbjct: 444 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 503
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
+SW S+I+G+ +G A +F +M + +++ +++ S G + + + FN
Sbjct: 504 ISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNS 563
Query: 291 MPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
M ++ + + ++ + EA + M + + L ++L A
Sbjct: 564 MYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM---PLMADALVWRTLLGACRVHG 620
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRIFTNIDERNIV 398
G HA + + E D L+S L++ G D +I ++ ERN++
Sbjct: 621 NTELGR--HAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 672
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 129/281 (45%), Gaps = 34/281 (12%)
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
AF M +++ P+ T S +L + G +H +++ +E D + N+L
Sbjct: 8 HHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTL 67
Query: 373 VSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+SLYSKCG+ A IF + ++R++VS+++M+S FA N + +A+ F M + G PN
Sbjct: 68 ISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPN 127
Query: 432 QITFLSVLSACNHVGLVEEG-FIYFKSMKTLY---NIEPGPEHYACMVDILGR-AGSLAE 486
+ F +V+ AC++ G IY +KT Y ++ G E ++D+ + +G L
Sbjct: 128 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCE----LIDMFVKGSGDLGS 183
Query: 487 AIDLINSMTFEPPPGVWG------ALLGAGRTHLNLDLAKLAAQHLMELE---PDSATPY 537
A + + M E W A LG R ++L L MEL PD T
Sbjct: 184 AYKVFDKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLD-------MELSGYVPDRFTYS 235
Query: 538 VVLSDLYSV----IGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
VLS + +GK+ +R+ L GCS +
Sbjct: 236 SVLSACTELGLLALGKQLHSRVIRLGLALD---VCVGCSLV 273
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/642 (32%), Positives = 351/642 (54%), Gaps = 52/642 (8%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNMP--ARWRDSVCSNALI-----SGYLKVGRCE 88
R+ VS++AM++ F M ++A +++M + + C A+I + Y VG
Sbjct: 109 RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEII 168
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCK-KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
+ +E DV ++D + K G + A ++FDKMPE+N+V WT M+ + ++
Sbjct: 169 YGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLG 228
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
C D DLFL M G + T + + AC G Q+H V R G D+ +G
Sbjct: 229 CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGC 288
Query: 208 SIITMYGRL---GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE-EAYRLFERM--- 260
S++ MY + G +D++ KVF M + + +SW ++I+ YV +GE + EA LF +M
Sbjct: 289 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 348
Query: 261 -----------------------PGKDFVSWT-------------TMITGFSSKGNLEKS 284
G+ S+ ++I+ ++ G +E +
Sbjct: 349 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 408
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+ F+++ EK+ V++ AI+ G+ N + EEAF F E+ + + T +S+LS +A+
Sbjct: 409 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 468
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+ +G QIH ++K +S+ I N+L+S+YS+CGN+ A+++F +++RN++S+ SMI
Sbjct: 469 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 528
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
+GFA++G AL +F KM + G PN+IT+++VLSAC+HVG++ EG +F SM + I
Sbjct: 529 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 588
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
P EHYACMVD+LGR+G L EA++ INSM VW LLGA R H N +L + AA+
Sbjct: 589 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAE 648
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
++E EPD Y++LS+L++ G+ +D ++R K + + K GCSWI ++++VH F
Sbjct: 649 MILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFH 708
Query: 585 AGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
G S +I L ++ KE + P D+ L +E +
Sbjct: 709 VGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEE 750
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 233/527 (44%), Gaps = 90/527 (17%)
Query: 23 IYEAFEIFATMPMRNA----VSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNA 76
++ AF M +NA +Y+ ++ +R F + ++ + DSV N
Sbjct: 25 LHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT 84
Query: 77 LISGYLKVGRCEEAARIFEAMVEK-DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
LIS Y K G E A IFE M K D+V+W +MV C +E + I
Sbjct: 85 LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVS--CFANNSMEWQAI----------- 131
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT FL M G N + AC G ++G V
Sbjct: 132 WT------------------FLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVV 173
Query: 196 RFGF-DYDIILGNSIITMYGR-LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G+ + D+ +G +I M+ + G + A KVF M +R+ V+W +I+ + G +A
Sbjct: 174 KTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA 233
Query: 254 YRLFERMPGKDFV------------------------------------------SWTTM 271
LF M +V S M
Sbjct: 234 IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 293
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN-EQYEEAFRWFIEMLRKDVRPN 330
++ G+++ S ++F MPE + ++WTAII+ +V + E +EA F +M+ +RPN
Sbjct: 294 YAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPN 353
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ SSVL A + G Q++++ VK+ + S + NSL+S+Y++ G + DA + F
Sbjct: 354 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD 413
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ E+N+VSYN+++ G+A+N EEA LF ++ D G+ + TF S+LS +G + +
Sbjct: 414 ILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK 473
Query: 451 G-FIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSM 494
G I+ + +K Y C ++ + R G++ A + N M
Sbjct: 474 GEQIHGRLLKGGYK----SNQCICNALISMYSRCGNIEAAFQVFNEM 516
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 180/414 (43%), Gaps = 52/414 (12%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM---PMR-NAVSYAAMITGFVRRGMFYE 56
M + S+ A+ITA + + EA E+F M +R N S+++++ Y
Sbjct: 313 MPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 372
Query: 57 AEELYVNMPARWRDSV--CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
E++Y SV N+LIS Y + GR E+A + F+ + EK++V++ ++VDGY K
Sbjct: 373 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 432
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
+ E+ F LF + G+ ++ T L
Sbjct: 433 NLKS-------------------------------EEAFLLFNEIADTGIGISAFTFASL 461
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
+G Q+HG + + G+ + + N++I+MY R G ++ A +VF+ M R+
Sbjct: 462 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 521
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
+SW S+I+G+ +G A +F +M + +++ +++ S G + + + FN
Sbjct: 522 ISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNS 581
Query: 291 MPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
M ++ + + ++ + EA + M + + L ++L A
Sbjct: 582 MYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM---PLMADALVWRTLLGACRVHG 638
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRIFTNIDERNIV 398
G HA + + E D L+S L++ G D +I ++ ERN++
Sbjct: 639 NTELGR--HAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 690
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 129/281 (45%), Gaps = 34/281 (12%)
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
AF M +++ P+ T S +L + G +H +++ +E D + N+L
Sbjct: 26 HHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTL 85
Query: 373 VSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+SLYSKCG+ A IF + ++R++VS+++M+S FA N + +A+ F M + G PN
Sbjct: 86 ISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPN 145
Query: 432 QITFLSVLSACNHVGLVEEG-FIYFKSMKTLY---NIEPGPEHYACMVDILGR-AGSLAE 486
+ F +V+ AC++ G IY +KT Y ++ G E ++D+ + +G L
Sbjct: 146 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCE----LIDMFVKGSGDLGS 201
Query: 487 AIDLINSMTFEPPPGVWG------ALLGAGRTHLNLDLAKLAAQHLMELE---PDSATPY 537
A + + M E W A LG R ++L L MEL PD T
Sbjct: 202 AYKVFDKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLD-------MELSGYVPDRFTYS 253
Query: 538 VVLSDLYSV----IGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
VLS + +GK+ +R+ L GCS +
Sbjct: 254 SVLSACTELGLLALGKQLHSRVIRLGLALD---VCVGCSLV 291
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/655 (32%), Positives = 357/655 (54%), Gaps = 49/655 (7%)
Query: 13 ITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RD 70
+ AL + + + A IF+TM R+ VSY ++I+G V++G A EL+ M D
Sbjct: 302 LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPD 361
Query: 71 SVCSNALISGYLKVGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
+ +L+S VG + ++ +A + D++ GS++D Y K V A + F
Sbjct: 362 CITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFL 421
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+N+V W M+ Y ++D D F++F M+ GM N T + C
Sbjct: 422 TTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYL 481
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G Q+H V + GF ++ + + +I MY + G + A ++ + + D VSW ++I+GYV
Sbjct: 482 GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQ 541
Query: 247 NGEIEEAYRLFERMP---------------------------------------GKDFVS 267
+ EA +LFE M G D
Sbjct: 542 HDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSI 601
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+I+ ++ G ++++ F + +K++++W +++SG + +EEA + F+ MLR +
Sbjct: 602 NNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEA 661
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
N T S +SA+A+ A + QG QIH+ V+K +S+ + NSL+SLY+K G++ DA+R
Sbjct: 662 EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWR 721
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
F ++ ERN++S+N+MI+G++Q+G G EAL LF +MK G++PN +TF+ VLSAC+H+GL
Sbjct: 722 EFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGL 781
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
V+EG YF+SM ++++ P EHY C+VD+LGRAG L A++ I M +W LL
Sbjct: 782 VKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLL 841
Query: 508 GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK--KRDGNRVRMKKKLKRI 565
A H N+++ + AA HL+ELEP+ + YV++S++Y+V + RD +R MK + +
Sbjct: 842 SACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKD--RGV 899
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
+K PG SWI +K+ VH F AG K +I + +++ T E + + +SLL
Sbjct: 900 KKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLL 954
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 239/501 (47%), Gaps = 55/501 (10%)
Query: 77 LISGYLKVGRCEEA----ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
L+ G L G E RI ++ + + + S+VD Y + G A ++FD+ ++
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYREGVQVH 191
V +W M+ ++ F LF M G+ N T + +AC G + QVH
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+GFD ++ N +I +Y + G+++ A KVF+ + +D V+W ++ISG NG E
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243
Query: 252 EAYRLFERMPGKD-----------------------------------FVSWTTMITG-- 274
EA LF M + F S T + G
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303
Query: 275 --FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
+S L + +F+ M +D V++ ++ISG V + A F +M R ++P+ +
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T++S+LSA A+ L++G Q+H+H +K M +D+ ++ SL+ LYSKC +V A++ F
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTT 423
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG- 451
+ NIV +N M+ + Q ++ +FR+M+ EG++PNQ T+ S+L C +G + G
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 452 FIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
I+ +KT + + Y C ++D+ + G LA A+ ++ + E W A++
Sbjct: 484 QIHTHVIKTGFQLNV----YVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAG 538
Query: 510 GRTHLNLDLAKLAAQHLMELE 530
H D+ A Q E+E
Sbjct: 539 YVQH---DMFSEALQLFEEME 556
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 227/489 (46%), Gaps = 49/489 (10%)
Query: 12 MITALINN---NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---- 64
+I +L++N + + A ++F R+ S+ MI FV + ++ L+ M
Sbjct: 95 LIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEG 154
Query: 65 --PARWRDSVCSNALISGYLKVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
P + + A + G + ++ +R F + + ++D Y K G + A
Sbjct: 155 ITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
+++F+ + K++V W AM+ G + E+ LF M + L+ + A +
Sbjct: 215 KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+ G Q+H LV ++GF + + N ++ +Y R + A ++FS M+ RD VS+NSLI
Sbjct: 275 QLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLI 334
Query: 242 SGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL---------- 287
SG V G + A LF +M D ++ ++++ +S G L K ++L
Sbjct: 335 SGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS 394
Query: 288 ------------------------FNMMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEM 322
F + E ++ V W ++ + + ++F F +M
Sbjct: 395 ADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM 454
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ + PNQ T S+L + L G QIH HV+K + +V + + L+ +Y+K G +
Sbjct: 455 QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQL 514
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A RI + E ++VS+ +MI+G+ Q+ + EAL LF +M+ G+ + I F S +SAC
Sbjct: 515 ALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC 574
Query: 443 NHVGLVEEG 451
+ + +G
Sbjct: 575 AGIRALRQG 583
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 156/333 (46%), Gaps = 40/333 (12%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M G+ N L E C E +++H +S+ GFD + +L +S++ Y R G
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------------ 260
A KVF S R SWN +I +V + + LF RM
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 261 -PGKDF-------VSWTTMITGF--------------SSKGNLEKSIELFNMMPEKDDVT 298
G D V T GF S G +E + ++FN + KD VT
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT 228
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISG N EEA F +M ++ P LSSVLSAS G Q+H V+
Sbjct: 229 WVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVI 288
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K S+ + N LV+LYS+ ++ A RIF+ ++ R+ VSYNS+ISG Q G + AL
Sbjct: 289 KWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALE 348
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
LF KM+ + L P+ IT S+LSAC VG + +G
Sbjct: 349 LFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + VR N +L + +L + ++H + K + + + +SLV Y + G+
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
A ++F R++ S+N MI F + LFR+M EG+ PN TF VL A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 442 CNHVGLVEEGFIYFKSMKT---LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
C VG + F Y K + + Y + P ++D+ + G + A + N + +
Sbjct: 169 C--VG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKD 225
Query: 499 PPGVWGALLGAGRTHLNLD---LAKLAAQHLMELEPDSATPYVVLSDL 543
W A++ +G + L+ + H E+ P TPYV+ S L
Sbjct: 226 IV-TWVAMI-SGLSQNGLEEEAILLFCDMHASEIFP---TPYVLSSVL 268
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 346/627 (55%), Gaps = 57/627 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-------PARWR----DS 71
+ EA ++F ++ RN VSY A++ G+V+ G EA ELY +M P ++ +
Sbjct: 428 VEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLT 487
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
+C+N GR + A + A + K+++ +V Y + GR+ A+EIF++M E+
Sbjct: 488 LCANQRNDNQ---GR-QIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAER 543
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
N +W +M++GY + ++ LF M+ G+ + +L+ + +C ++G ++H
Sbjct: 544 NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELH 603
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ R + + IL ++ MY + G MD A KV+ K
Sbjct: 604 NFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIK-------------------- 643
Query: 252 EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
KD + M++ F + G + LF+ M +++ W +I++G+ N
Sbjct: 644 -----------KDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGL 692
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN-MESDVSIQN 370
+E+F F+EML D+ + LT+ ++++ ++ L G Q+H+ ++K + V ++
Sbjct: 693 KKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLET 752
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+LV +YSKCG + A +F N++ +NIVS+N+MISG++++G +EAL L+ +M +G+ P
Sbjct: 753 ALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYP 812
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
N++TFL++LSAC+H GLVEEG F SM+ YNIE EHY CMVD+LGRAG L +A +
Sbjct: 813 NEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEF 872
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
+ M EP WGALLGA R H ++D+ +LAAQ L EL+P + PYV++S++Y+ G+
Sbjct: 873 VEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRW 932
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEF 610
++ +R K+K ++K PG SWI + ++ +F AG K+ +EI L+ ++ +K
Sbjct: 933 KEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKG- 991
Query: 611 DWPKHDWSLLGLERDWSYTADNIKRIK 637
LG D S+ N+K IK
Sbjct: 992 ---------LGYIPDTSFILQNVKDIK 1009
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 254/510 (49%), Gaps = 57/510 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLK 83
A ++F MP RN ++ MI + R + E LY M + D ++I +
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIA 187
Query: 84 V----GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
+ G + + + +A + ++ G++VDGY + G + +A D++ +VV W A+
Sbjct: 188 MEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAV 247
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ GY+K+ +E+ + +F M + G+ ++ T CG G QVH + GF
Sbjct: 248 IAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGF 307
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D +GN++I MY + + KVF M +R+ V+WNS+IS G +A LF R
Sbjct: 308 KGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLR 367
Query: 260 MP------------------------GK---------------DFVSWTTMITGFSSKGN 280
M GK D + + ++ +S G
Sbjct: 368 MQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGM 427
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLS 339
+E++ ++F + E+++V++ A+++G+V + EEA + +M +D ++P+Q T +++L+
Sbjct: 428 VEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLT 487
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A NQG QIHAH+++ N+ ++ ++ LV +YS+CG + A IF + ERN S
Sbjct: 488 LCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYS 547
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-----FIY 454
+NSMI G+ QNG +EAL LF++M+ G+ P+ + S+LS+C + ++G FI
Sbjct: 548 WNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIV 607
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
+M+ E G +VD+ + GS+
Sbjct: 608 RNTME-----EEGILQ-VVLVDMYAKCGSM 631
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 237/500 (47%), Gaps = 93/500 (18%)
Query: 42 AAMITGFVRRGMFYEA----EELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM 97
A++ G+ R G +A +E+ W NA+I+GY+K+ EEA IF+ M
Sbjct: 214 GALVDGYARFGWMDDAVTSLDEIEGTSVVTW------NAVIAGYVKILSWEEAWGIFDRM 267
Query: 98 ------------------------------VEKDVVAWG---------SMVDGYCKKGRV 118
V ++A G +++D Y K
Sbjct: 268 LKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDE 327
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
++FD+M E+N V W +++ + F D LFL M+ G N L + A
Sbjct: 328 ESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMAS 387
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+G ++HG + R + DIILG++++ MY + G ++EA++VF + +R+ VS+N
Sbjct: 388 AGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYN 447
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFV-----SWTTMIT-------------------- 273
+L++GYV G+ EEA L+ M +D + ++TT++T
Sbjct: 448 ALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIR 507
Query: 274 ---------------GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+S G L + E+FN M E++ +W ++I G+ N + +EA R
Sbjct: 508 ANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRL 567
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F +M ++P+ +LSS+LS+ + + +G ++H +V+ ME + +Q LV +Y+K
Sbjct: 568 FKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAK 627
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG++ A++++ +++++ N M+S F +G +A NLF +M+ N + S+
Sbjct: 628 CGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQR----NTALWNSI 683
Query: 439 LSACNHVGLVEEGFIYFKSM 458
L+ + GL +E F +F M
Sbjct: 684 LAGYANKGLKKESFNHFLEM 703
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 204/462 (44%), Gaps = 52/462 (11%)
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE---AN 223
N + + L + C ++ G +H + G++ D L I+ +Y R G +D+ A
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-------------------- 263
K+F M +R+ +WN++I Y + E RL+ RM G
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAME 189
Query: 264 -------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
+ ++ G++ G ++ ++ + + VTW A+I+
Sbjct: 190 DMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIA 249
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G+V +EEA+ F ML+ V P+ T +S L A + + G Q+H+ ++ +
Sbjct: 250 GYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKG 309
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D + N+L+ +Y+KC + ++F + ERN V++NS+IS AQ G +AL LF +M+
Sbjct: 310 DTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ 369
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYN--IEPGPEHYACMVDILGRA 481
+ G N+ S+L A + + +G ++ ++ L N I G + +VD+ +
Sbjct: 370 ESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILG----SALVDMYSKC 425
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G + EA + S+ E + ALL AG L H M+ E +
Sbjct: 426 GMVEEAHQVFRSL-LERNEVSYNALL-AGYVQEGKAEEALELYHDMQSEDGIQPDQFTFT 483
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
L ++ +R+ N+ R + IR + + I+ + VH++
Sbjct: 484 TLLTLCANQRNDNQGR-QIHAHLIRANITKNIIVETELVHMY 524
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 14 TALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--W 68
TAL++ + C +I +A +F M +N VS+ AMI+G+ + G EA LY MP + +
Sbjct: 752 TALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMY 811
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEARE 123
+ V A++S G EE RIF +M +E + MVD + GR+ +A+E
Sbjct: 812 PNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKE 871
Query: 124 IFDKMP-EKNVVAWTAMV 140
+KMP E V W A++
Sbjct: 872 FVEKMPIEPEVSTWGALL 889
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD- 384
DV P L SS++ + + +G IH ++ D + ++ LY++ G + D
Sbjct: 68 DVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125
Query: 385 --AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A ++F + ERN+ ++N+MI +A+ E L L+ +M+ G ++ TF SV+ AC
Sbjct: 126 CYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC 185
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/568 (35%), Positives = 317/568 (55%), Gaps = 42/568 (7%)
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ GR A + A DV A S+++ YCK G V EAR++FD+MPE+N V+W M+ G
Sbjct: 133 RAGRQAHALAVKTA-CSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISG 191
Query: 143 YMKVDCFEDGFDLFLSMRR--GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
Y + ++ F+LF MR G N T + A + G QVH L + G
Sbjct: 192 YASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLV 251
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ + N+++TMY + G +++A K F + +++++W+++++G+ G+ ++A +LF M
Sbjct: 252 CIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDM 311
Query: 261 --------------------------PGKDFVSWT-------------TMITGFSSKGNL 281
G+ ++ ++ ++ G++
Sbjct: 312 HQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSI 371
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ + F + + D V WT+II+G+V N YE A + +M V PN LT++SVL A
Sbjct: 372 VDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKAC 431
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ A L+QG Q+HA ++K N ++ I ++L ++Y+KCG++ D YRIF + R+++S+N
Sbjct: 432 SNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWN 491
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MISG +QNG G E L LF KM EG P+ +TF+++LSAC+H+GLV+ G++YFK M
Sbjct: 492 AMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDE 551
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
+NI P EHYACMVDIL RAG L EA + I S T + +W LL A + H + DL
Sbjct: 552 FNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAY 611
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
A + LMEL ++ YV+LS +Y+ +GK D RVR K + + K PGCSWI LK H
Sbjct: 612 AGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTH 671
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+F+ G + EI + L+ ++K K+
Sbjct: 672 VFVVGDNMHPQIDEIRLGLKLLTKLMKD 699
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 210/416 (50%), Gaps = 47/416 (11%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L+ GR A + +A S+++ Y K +A +FD + K+VV+W +++
Sbjct: 26 LRKGRALHARILVTGSFSSTQIA-NSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLIN 84
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSI-----TLTILFEACGRFFRYREGVQVHGLVSR 196
+ + + R+ MA +I TLT +F A R G Q H L +
Sbjct: 85 AFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVK 144
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
+D+ +S++ MY + G + EA +F M +R+AVSW ++ISGY +EA+ L
Sbjct: 145 TACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFEL 204
Query: 257 FERM----PGKD-----FVSWTT--------------------------------MITGF 275
F+ M GK+ F S + ++T +
Sbjct: 205 FKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMY 264
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
G+LE +++ F + K+ +TW+A+++GF ++A + F +M + P++ TL
Sbjct: 265 VKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLV 324
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
V++A + + +G Q+H + +K+ E + + ++LV +Y+KCG++VDA + F I +
Sbjct: 325 GVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQP 384
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++V + S+I+G+ QNG E ALNL+ KM+ G++PN +T SVL AC+++ +++G
Sbjct: 385 DVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQG 440
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 176/358 (49%), Gaps = 51/358 (14%)
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
C R + R+G +H + G + NS+I +Y + +AN VF ++ +D VSW
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 238 NSLISGYVHN-------------------------------GEIEEAYRLFERMPGK--- 263
N LI+ + G A L + G+
Sbjct: 80 NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH 139
Query: 264 ----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
D + ++++ + G + ++ +LF+ MPE++ V+W +ISG+ + E +
Sbjct: 140 ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELAD 199
Query: 314 EAFRWFIEMLRKDVR---PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
EAF F +++R + + N+ +SVLSA +N G Q+H+ +K + VS+ N
Sbjct: 200 EAFELF-KLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVAN 258
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+LV++Y KCG++ DA + F +N +++++M++GFAQ G ++AL LF M G +P
Sbjct: 259 ALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELP 318
Query: 431 NQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
++ T + V++AC+ + EG ++ S+K Y ++ + +VD+ + GS+ +A
Sbjct: 319 SEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYV--LSALVDMYAKCGSIVDA 374
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 183/401 (45%), Gaps = 51/401 (12%)
Query: 1 MADRTSASYNAMI-TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYE 56
+A +T+ S++ ++L+N C ++EA ++F MP RNAVS+A MI+G+ + + E
Sbjct: 141 LAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADE 200
Query: 57 AEELYVNMPARWRDSVCSNALISGYLKVGRCE---EAARIFEAMVEKD-----VVAWGSM 108
A EL+ M + + + + L C R ++ K+ V ++
Sbjct: 201 AFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANAL 260
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
V Y K G + +A + F+ KN + W+AMV G+ + + LF M + G +
Sbjct: 261 VTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSE 320
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
TL + AC EG Q+HG + G++ + + ++++ MY + G + +A K F
Sbjct: 321 FTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFEC 380
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PG 262
+ + D V W S+I+GYV NG+ E A L+ +M G
Sbjct: 381 IQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQG 440
Query: 263 KDFVS-------------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
K + + + ++ G+L+ +F MP +D ++W A+ISG N
Sbjct: 441 KQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQN 500
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+ E F +M + +P+ +T ++LSA + +++G
Sbjct: 501 GRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRG 541
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/644 (33%), Positives = 342/644 (53%), Gaps = 65/644 (10%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEI--FATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
D+ S+N++I A N+ S +F I F M N V + G+F A L
Sbjct: 76 DKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNV----IPNAHTLAGVFSAASNL 131
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ + SV SG DV S+++ YCK G V +
Sbjct: 132 SDVVAGKQAHSVAVKTGCSG--------------------DVYVGSSLLNMYCKTGFVFD 171
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD+MPE+N V+W M+ GY D + ++F MRR N LT + A
Sbjct: 172 ARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTS 231
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G QVH L + G + + N+++TMY + G +D+A + F +++++W+++
Sbjct: 232 DVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAM 291
Query: 241 ISGYVHNGEIEEAYRLFERM--------------------------PGKDFVSW------ 268
++GY G+ ++A +LF +M GK S+
Sbjct: 292 VTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGF 351
Query: 269 -------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+ ++ ++ G+L + + F + + D V WT+II+G+V N YE + +
Sbjct: 352 GLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGK 411
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + V PN+LT++SVL A ++ A L+QG Q+HA ++K + +V I ++L ++Y+KCG+
Sbjct: 412 MQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGS 471
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ D Y IF + R+++S+N+MISG +QNG G +AL LF KM EG+ P+ +TF+++LSA
Sbjct: 472 LDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSA 531
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C+H+GLV+ G+ YFK M +NI P EHYACMVDIL RAG L EA + I S T +
Sbjct: 532 CSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLC 591
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
+W LLGA + H N +L A + L+EL ++ YV+LS +Y+ +G + + RVR K
Sbjct: 592 LWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMK 651
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
+ + K PGCSWI LK VH+F+ G + EI + L+ ++K
Sbjct: 652 ARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTK 695
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L K P L L + +G +HA ++K S + + N+ ++LY+K ++
Sbjct: 3 LPKIFPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHL 62
Query: 383 VDAYRIFTNI--DERNIVSYNSMISGFAQNGLGEE---ALNLFRK-MKDEGLVPNQITFL 436
A +F +I ++++ VS+NS+I+ F+QN A++LFR+ M+ ++PN T
Sbjct: 63 SHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLA 122
Query: 437 SVLSACNHVGLVEEG 451
V SA +++ V G
Sbjct: 123 GVFSAASNLSDVVAG 137
>gi|413935435|gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays]
Length = 658
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/611 (33%), Positives = 321/611 (52%), Gaps = 70/611 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R ++N M++ L N + +A +F MP RN+VS+AA++TG+ RRG EA +L
Sbjct: 62 MRERNVFTWNCMVSGLARNGL-LADARGVFDAMPSRNSVSWAALLTGYARRGRVAEARDL 120
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ V NA++SGYL+ G + A +F+AM +D V+W MV GY ++ R E
Sbjct: 121 FDRMPH--RNVVSWNAMVSGYLRNGMVDRARELFDAMPARDDVSWLMMVSGYMRRKRFRE 178
Query: 121 AREIFDKMPEKNVVA-WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
AREIFD+ P + A++ GY +D +LF M+R
Sbjct: 179 AREIFDRAPSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQRP----------------- 221
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
D + N++IT Y R G M A ++F M +D VSW +
Sbjct: 222 ----------------------DRVSWNAMITGYTRAGMMQVARRLFDEMPGKDTVSWTA 259
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
++ GY+ NG+++ A+ +F+ MP +D ++W TM+ GF L+ ++ LF MP++D V+W
Sbjct: 260 IVRGYLQNGDVDAAWEVFQDMPDRDVLAWNTMMGGFVVSDRLDDALRLFADMPDRDLVSW 319
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKD---------------------------VRPNQL 332
I+ G++ + A WF ML KD RP+Q
Sbjct: 320 NTILQGYIQQGDMDSATTWFRSMLEKDETSWNTVISGYKDEGALSLLSEMTRGGYRPDQA 379
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S V+S A+ A L G +H +K E D + +SL+S+YSKCG + +A ++F I
Sbjct: 380 TWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQVFDLI 439
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+R+ V++N+MI+ +A +GL EAL LF +M + P+ TFLSVLSAC H G + EG
Sbjct: 440 VQRDTVTWNAMIATYAYHGLAAEALALFDRMTKDRFSPDHATFLSVLSACAHKGYLYEGC 499
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
YF+SM+ +N+ P +HY+CMVD+LGR+G + +A + + W L +
Sbjct: 500 HYFRSMQQDWNLVPRSDHYSCMVDLLGRSGFVHQAYNFTRKIPSNLQINAWETLFSSCNA 559
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H ++ L +L A+++++ P Y +LS++Y+ G VR K + ++K GCS
Sbjct: 560 HGDIQLGELVAKNVLQSRPSDGGMYTLLSNIYAAKGMWSSAATVRGLMKEQGLKKETGCS 619
Query: 573 WIILKDKVHLF 583
WI LK V F
Sbjct: 620 WIELKGDVVSF 630
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 134/257 (52%), Gaps = 11/257 (4%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D+ NS I + R G + A +VF M +R+ +WN ++SG NG + +A +F+ MP
Sbjct: 35 DVGRWNSDIMAHFRAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFDAMP 94
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
++ VSW ++TG++ +G + ++ +LF+ MP ++ V+W A++SG++ N + A F
Sbjct: 95 SRNSVSWAALLTGYARRGRVAEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDRARELFDA 154
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M +D ++ ++S + +I S+ N+L+S Y+ G
Sbjct: 155 MPARD----DVSWLMMVSGYMRRKRFREAREIFDRAPS---PPPTSVCNALLSGYAGYGY 207
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ DA +F + + VS+N+MI+G+ + G+ + A LF +M + + +++ +++
Sbjct: 208 LKDAEELFGRMQRPDRVSWNAMITGYTRAGMMQVARRLFDEMPGK----DTVSWTAIVRG 263
Query: 442 CNHVGLVEEGFIYFKSM 458
G V+ + F+ M
Sbjct: 264 YLQNGDVDAAWEVFQDM 280
>gi|356519676|ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 728
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/651 (34%), Positives = 362/651 (55%), Gaps = 54/651 (8%)
Query: 1 MADRTSASYNAMIT--ALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMF 54
M +RT +S+N MI+ +L+ EA + + M N VS++A+++ R G F
Sbjct: 67 MPNRTVSSWNTMISGYSLLGR---YPEALTLVSFMHRSCVALNEVSFSAVLSACARSGSF 123
Query: 55 YEAEELYVNM--PARWRDSVCSNALISGYLKVGRC--EEAARIFEAMVEKDVVAWGSMVD 110
++++ + R + +AL+ Y V C EA +FE + + + V W M+
Sbjct: 124 LLGKQVHSLLLKSGYERFGLVGSALL--YFCVHCCGIREAEVVFEELRDGNQVLWSLMLA 181
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV-DCFEDGFDLFLSMRRGGMAF-NS 168
GY K+ + +A ++F+KMP ++VVAWT ++ GY K D E DLF MRR N
Sbjct: 182 GYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNE 241
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY--------------- 213
TL + C R R G VHGL + G D+D +G ++ Y
Sbjct: 242 FTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYES 301
Query: 214 --------------GRL---GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
G L G ++EA VF + + + VS+N +I GY +G+ E++ RL
Sbjct: 302 MGGQASLNVANSLIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRL 361
Query: 257 FERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISGFVNNEQYEEA 315
FE+M ++ S TMI+ +S G L+++++LF+ E++ V+W +++SG++ N +Y+EA
Sbjct: 362 FEKMSPENLTSLNTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEA 421
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
++ M R V ++ T S + A + + QG +HAH++K + +V + +LV
Sbjct: 422 LNLYVAMRRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDF 481
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
YSKCG++ +A R F +I N+ ++ ++I+G+A +GLG EA+ LFR M +G+VPN TF
Sbjct: 482 YSKCGHLAEAQRSFISIFSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATF 541
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+ VLSACNH GLV EG F SM+ Y + P EHY C+VD+LGR+G L EA + I M
Sbjct: 542 VGVLSACNHAGLVCEGLRIFHSMQRCYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMP 601
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNR 555
E +WGALL A ++++ + AA+ L L+P+ +VVLS++Y+++G R G +
Sbjct: 602 IEADGIIWGALLNASWFWKDMEVGERAAEKLFSLDPNPIFAFVVLSNMYAILG--RWGQK 659
Query: 556 VRMKKKLK--RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
+++K+L+ +RK PGCSWI L +K+HLF K+ L I T++ I+
Sbjct: 660 TKLRKRLQSLELRKDPGCSWIELNNKIHLFSVEDKTHLYSDVIYATVEHIT 710
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 205/483 (42%), Gaps = 83/483 (17%)
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G++ EAR +FD+MP + V +W M+ GY + + + L M R +A N ++ +
Sbjct: 53 KMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMHRSCVALNEVSFSA 112
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ AC R + G QVH L+ + G++ ++G++++ + EA VF + +
Sbjct: 113 VLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEELRDGN 172
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN-LEKSIELFNMMP 292
V W+ +++GYV +++A +FE+MP +D V+WTT+I+G++ + + E++++LF M
Sbjct: 173 QVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMR 232
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+V PN+ TL V+ A L G
Sbjct: 233 RSSEVL------------------------------PNEFTLDCVVRVCARLGVLRAGKV 262
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR------------------------- 387
+H +K ++ D SI ++ Y C + DA R
Sbjct: 263 VHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLIGGLVSKG 322
Query: 388 -------IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+F + E N VSYN MI G+A +G E++ LF KM E L + +++S
Sbjct: 323 RIEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPENLT----SLNTMIS 378
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR---AGSLAEAIDLINSM--- 494
+ G ++E F K G +Y ++ G EA++L +M
Sbjct: 379 VYSKNGELDEAVKLFDKTK-------GERNYVSWNSMMSGYIINGKYKEALNLYVAMRRL 431
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV--VLSDLYSVIGKKRD 552
+ + + L A + +L HL++ P YV L D YS G +
Sbjct: 432 SVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIK-TPFQVNVYVGTALVDFYSKCGHLAE 490
Query: 553 GNR 555
R
Sbjct: 491 AQR 493
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 64/252 (25%)
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
+ +S N I+ G++EEA LF++MP + SW TMI+G+S G
Sbjct: 40 NVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLG------------- 86
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+Y EA M R V N+++ S+VLSA A + + G Q
Sbjct: 87 ------------------RYPEALTLVSFMHRSCVALNEVSFSAVLSACARSGSFLLGKQ 128
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE------------------ 394
+H+ ++K E + ++L+ C + +A +F + +
Sbjct: 129 VHSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDM 188
Query: 395 -------------RNIVSYNSMISGFAQNGLG-EEALNLFRKMKDEG-LVPNQITFLSVL 439
R++V++ ++ISG+A+ G E AL+LF M+ ++PN+ T V+
Sbjct: 189 MDDAMDMFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVV 248
Query: 440 SACNHVGLVEEG 451
C +G++ G
Sbjct: 249 RVCARLGVLRAG 260
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/544 (35%), Positives = 316/544 (58%), Gaps = 4/544 (0%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+ N L++ Y K G A ++F+ M ++D +W +M+ Y K G V + R IFD MP
Sbjct: 57 DTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMP 116
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
++ V++ ++ G+ +FL M++ G+ T + AC + R G Q
Sbjct: 117 SRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQ 176
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+HG + ++ + N++ +Y R G +D+A ++F M R+ V+WN +ISGY+ N +
Sbjct: 177 IHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQ 236
Query: 250 IEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
E+ LF M D V+ ++++ + G ++++ ++F + EKD+V WT +I G
Sbjct: 237 PEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVG 296
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
N + E+A F EML ++ RP+ T+SSV+S+ A A+L G +H M + D
Sbjct: 297 CAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDD 356
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ + ++LV +Y KCG DA+ IF+ + RN+VS+NSMI G+A NG EAL+L+ M +
Sbjct: 357 LLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLE 416
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
E L P+ +TF+ VLSAC H GLVEEG YF SM + +EP P+HYACMV++ GR+G +
Sbjct: 417 ENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMD 476
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYS 545
+A+DLI+SM+ EP +W +L ++ ++AA+ L+EL P +A PY++LS++Y+
Sbjct: 477 KAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYA 536
Query: 546 VIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
G+ +D +R K K ++K SWI + ++VH F+A ++ D K I V L + +
Sbjct: 537 ARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIR 596
Query: 606 GTKE 609
+E
Sbjct: 597 KLQE 600
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 151/288 (52%), Gaps = 10/288 (3%)
Query: 215 RLGFMDEANKVFSMM-----SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
R +D+A ++ S M D N L++ Y +GEI A +LF+ M +D SW
Sbjct: 34 RASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWN 93
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
M++ ++ G +E +F+ MP +D V++ +ISGF N + A F+ M ++ ++P
Sbjct: 94 AMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKP 153
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ T SVL+A L +G QIH ++ N+ +V + N+L LY++CG + A R+F
Sbjct: 154 TEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLF 213
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ RN+V++N MISG+ +N E+ ++LF +M+ L P+Q+T SVL A G ++
Sbjct: 214 DRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYID 273
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
E F ++ E + M+ + G +A+ L + M E
Sbjct: 274 EARKVFGEIR-----EKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLE 316
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 199/507 (39%), Gaps = 148/507 (29%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I A ++F M R+ S+ AM++ + + G+ + ++ NMP+ RDSV N +ISG+
Sbjct: 74 ISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPS--RDSVSYNTVISGFA 131
Query: 83 KVGRCEEAARIFEAMVEK---------------------------------------DVV 103
GR A +F M ++ +V
Sbjct: 132 GNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVF 191
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
++ D Y + G + +AR +FD+M +NVV W M+ GY+K E DLF M+
Sbjct: 192 VCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSN 251
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+ + +T +S++ Y + G++DEA
Sbjct: 252 LKPDQVT-----------------------------------ASSVLGAYIQAGYIDEAR 276
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------------- 260
KVF + ++D V W +I G NG+ E+A LF M
Sbjct: 277 KVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLA 336
Query: 261 --------PGK--------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
GK D + + ++ + G + +F+ M ++ V+W ++I
Sbjct: 337 SLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIG 396
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G+ N Q EA + ML ++++P+ +T VLSA +HA +V+ E
Sbjct: 397 GYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSAC-----------VHAGLVEEGKEY 445
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
S+ D + + D Y M++ F ++G ++A++L M
Sbjct: 446 FCSMS--------------DQHGLEPTPDH-----YACMVNLFGRSGHMDKAVDLISSMS 486
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEG 451
E PN + + +VLS C G ++ G
Sbjct: 487 QE---PNSLIWTTVLSVCVMKGDIKHG 510
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 14 TALINNNCSI---YEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--W 68
+AL++ C +A+ IF+TM RN VS+ +MI G+ G EA LY NM
Sbjct: 361 SALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLK 420
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEARE 123
DSV ++S + G EE F +M +E + MV+ + + G + +A +
Sbjct: 421 PDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVD 480
Query: 124 IFDKMP-EKNVVAWTAMV 140
+ M E N + WT ++
Sbjct: 481 LISSMSQEPNSLIWTTVL 498
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/645 (34%), Positives = 349/645 (54%), Gaps = 49/645 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARW 68
NAM++ L+ I+ A+ +FA MP R+ S+ M+ G+ + G EA +LY M A
Sbjct: 135 NAMLSMLVRFG-EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193
Query: 69 RDSV----CSNALISGY--LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
R V C G ++GR E A + +V ++V Y K G ++ AR
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGR-EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
++FD M + ++W AM+ G+ + E G +LFL+M + N +T+T + A G
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
++HG + GF D+ NS+I MY LG M +A K+FS M +DA+SW ++IS
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372
Query: 243 GY-----------------VHN------------------GEIEEAYRLFERMPGKDFVS 267
GY +HN G ++ +L E K F+
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432
Query: 268 WT----TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ ++ ++ +++K+IE+F M EKD V+W+++I+GF N + EA +F ML
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML 492
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
V+PN +T + LSA AAT L G +IHA+V++ + S+ + N+L+ LY KCG
Sbjct: 493 -GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A+ F+ E+++VS+N M+SGF +GLG+ AL+LF +M + G P+++TF+++L AC+
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS 611
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
G+V +G+ F M ++I P +HYACMVD+L R G L EA +LIN M +P VW
Sbjct: 612 RAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVW 671
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
GALL R H +++L +LAA+ ++ELEP+ +V+L DLY+ GK RVR + K
Sbjct: 672 GALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREK 731
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+ + GCSW+ +K H FL +S +KEI V L I + K
Sbjct: 732 GLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMK 776
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 138/273 (50%), Gaps = 39/273 (14%)
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ + LGN++++M R G + A +VF+ M +RD SWN ++ GY G +EEA L+ RM
Sbjct: 129 FGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRM 188
Query: 261 ------P---------------------------------GKDFVSWTTMITGFSSKGNL 281
P G + ++T ++ G++
Sbjct: 189 LWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDI 248
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ ++F+ M D ++W A+I+G N + E F+ ML +V+PN +T++SV AS
Sbjct: 249 VAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVAS 308
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ + ++H VK DV+ NSL+ +Y+ G + DA +IF+ ++ ++ +S+
Sbjct: 309 GMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWT 368
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+MISG+ +NG ++AL ++ M+ + P+ +T
Sbjct: 369 AMISGYEKNGFPDKALEVYALMELHNVSPDDVT 401
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/655 (32%), Positives = 356/655 (54%), Gaps = 49/655 (7%)
Query: 13 ITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RD 70
+ AL + + + A IF+TM R+ VSY ++I+G V++G A EL+ M D
Sbjct: 302 LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPD 361
Query: 71 SVCSNALISGYLKVGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
+ +L+S VG + ++ +A + D++ GS++D Y K V A + F
Sbjct: 362 CITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFL 421
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+N+V W M+ Y ++D D F++F M+ GM N T + C
Sbjct: 422 XTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYL 481
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G Q+H V + GF ++ + + +I MY + G + A ++ + + D VSW ++I+GYV
Sbjct: 482 GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQ 541
Query: 247 NGEIEEAYRLFERMP---------------------------------------GKDFVS 267
+ EA +LFE M G D
Sbjct: 542 HDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSI 601
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+I+ ++ G ++++ F + +K++++W +++SG + +EEA + F+ MLR +
Sbjct: 602 NNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEA 661
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
N T S +SA+A+ A + QG QIH+ V+K +S+ + NSL+SLY+K G++ DA+R
Sbjct: 662 EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWR 721
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
F ++ ERN++S+N+MI+G++Q+G G EAL LF +MK G++PN +TF+ VLSAC+H+GL
Sbjct: 722 EFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGL 781
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
V+EG YF+SM ++++ P EHY C+VD+LGRAG L A++ I M +W LL
Sbjct: 782 VKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLL 841
Query: 508 GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK--KRDGNRVRMKKKLKRI 565
A H N+++ + AA HL+ELEP+ + YV++S++Y+V + RD +R MK +
Sbjct: 842 SACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKD--XGV 899
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
+K PG SWI +K+ VH F AG K +I + +++ T E + + +SLL
Sbjct: 900 KKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLL 954
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 239/501 (47%), Gaps = 55/501 (10%)
Query: 77 LISGYLKVGRCEEA----ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
L+ G L G E RI ++ + + + S+VD Y + G A ++FD+ ++
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYREGVQVH 191
V +W M+ ++ F LF M G+ N T + +AC G + QVH
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+GFD ++ N +I +Y + G+++ A KVF+ + +D V+W ++ISG NG E
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243
Query: 252 EAYRLFERMPGKD-----------------------------------FVSWTTMITG-- 274
EA LF M + F S T + G
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303
Query: 275 --FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
+S L + +F+ M +D V++ ++ISG V + A F +M R ++P+ +
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T++S+LSA A+ L++G Q+H+H +K M +D+ ++ SL+ LYSKC +V A++ F
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXT 423
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG- 451
+ NIV +N M+ + Q ++ +FR+M+ EG++PNQ T+ S+L C +G + G
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 452 FIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
I+ +KT + + Y C ++D+ + G LA A+ ++ + E W A++
Sbjct: 484 QIHTHVIKTGFQLNV----YVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAG 538
Query: 510 GRTHLNLDLAKLAAQHLMELE 530
H D+ A Q E+E
Sbjct: 539 YVQH---DMFSEALQLFEEME 556
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 227/489 (46%), Gaps = 49/489 (10%)
Query: 12 MITALINN---NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---- 64
+I +L++N + + A ++F R+ S+ MI FV + ++ L+ M
Sbjct: 95 LIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEG 154
Query: 65 --PARWRDSVCSNALISGYLKVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
P + + A + G + ++ +R F + + ++D Y K G + A
Sbjct: 155 ITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
+++F+ + K++V W AM+ G + E+ LF M + L+ + A +
Sbjct: 215 KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+ G Q+H LV ++GF + + N ++ +Y R + A ++FS M+ RD VS+NSLI
Sbjct: 275 QLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLI 334
Query: 242 SGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL---------- 287
SG V G + A LF +M D ++ ++++ +S G L K ++L
Sbjct: 335 SGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS 394
Query: 288 ------------------------FNMMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEM 322
F + E ++ V W ++ + + ++F F +M
Sbjct: 395 ADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM 454
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ + PNQ T S+L + L G QIH HV+K + +V + + L+ +Y+K G +
Sbjct: 455 QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQL 514
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A RI + E ++VS+ +MI+G+ Q+ + EAL LF +M+ G+ + I F S +SAC
Sbjct: 515 ALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC 574
Query: 443 NHVGLVEEG 451
+ + +G
Sbjct: 575 AGIRALRQG 583
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 156/333 (46%), Gaps = 40/333 (12%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M G+ N L E C E +++H +S+ GFD + +L +S++ Y R G
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------------ 260
A KVF S R SWN +I +V + + LF RM
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 261 -PGKDF-------VSWTTMITGF--------------SSKGNLEKSIELFNMMPEKDDVT 298
G D V T GF S G +E + ++FN + KD VT
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT 228
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISG N EEA F +M ++ P LSSVLSAS G Q+H V+
Sbjct: 229 WVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVI 288
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K S+ + N LV+LYS+ ++ A RIF+ ++ R+ VSYNS+ISG Q G + AL
Sbjct: 289 KWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALE 348
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
LF KM+ + L P+ IT S+LSAC VG + +G
Sbjct: 349 LFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + VR N +L + +L + ++H + K + + + +SLV Y + G+
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
A ++F R++ S+N MI F + LFR+M EG+ PN TF VL A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 442 CNHVGLVEEGFIYFKSMKT---LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
C VG + F Y K + + Y + P ++D+ + G + A + N + +
Sbjct: 169 C--VG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKD 225
Query: 499 PPGVWGALLGAGRTHLNLD---LAKLAAQHLMELEPDSATPYVVLSDL 543
W A++ +G + L+ + H E+ P TPYV+ S L
Sbjct: 226 IV-TWVAMI-SGLSQNGLEEEAILLFCDMHASEIFP---TPYVLSSVL 268
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 223/645 (34%), Positives = 349/645 (54%), Gaps = 49/645 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARW 68
NAM++ L+ I+ A+ +FA MP R+ S+ M+ G+ + G EA +LY M A
Sbjct: 135 NAMLSMLVRFG-EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193
Query: 69 RDSV----CSNALISGY--LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
R V C G ++GR E A + +V ++V Y K G ++ AR
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGR-EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
++FD M + ++W AM+ G+ + E G +LFL+M + N +T+T + A G
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
++HG + GF D+ NS+I MY LG M +A K+FS M +DA+SW ++IS
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372
Query: 243 GY-----------------VHN------------------GEIEEAYRLFERMPGKDFVS 267
GY +HN G ++ +L E K F+
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432
Query: 268 WT----TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ ++ ++ +++K+IE+F M EKD V+W+++I+GF N + EA +F ML
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML 492
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
V+PN +T + LSA AAT L G +IHA+V++ + S+ + N+L+ LY KCG
Sbjct: 493 -GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A+ F+ E+++VS+N M+SGF +GLG+ AL+LF +M + G P+++TF+++L AC+
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS 611
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
G+V +G+ F M ++I P +HYACMVD+L R G L EA +LIN M +P VW
Sbjct: 612 RAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVW 671
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
GALL R H +++L +LAA+ ++ELEP+ +V+L DLY+ GK RVR + K
Sbjct: 672 GALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREK 731
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+ + GCSW+ +K H FL +S +KEI V L I + K
Sbjct: 732 GLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMK 776
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 138/274 (50%), Gaps = 39/274 (14%)
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ + LGN++++M R G + A +VF+ M +RD SWN ++ GY G +EEA L+ RM
Sbjct: 129 FGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRM 188
Query: 261 ------P---------------------------------GKDFVSWTTMITGFSSKGNL 281
P G + ++T ++ G++
Sbjct: 189 LWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDI 248
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ ++F+ M D ++W A+I+G N + E F+ ML +V+PN +T++SV AS
Sbjct: 249 VAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVAS 308
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ + ++H VK DV+ NSL+ +Y+ G + DA +IF+ ++ ++ +S+
Sbjct: 309 GMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWT 368
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
+MISG+ +NG ++AL ++ M+ + P+ +T
Sbjct: 369 AMISGYEKNGFPDKALEVYALMELHNVSPDDVTI 402
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 223/674 (33%), Positives = 365/674 (54%), Gaps = 56/674 (8%)
Query: 6 SASYNAMITALINNNCSIYE-AFEIFATM-PMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
S + N++I+ + + C +E A IF M R+ +S++AM++ F M + A +V+
Sbjct: 101 SVTLNSLIS--LYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVD 158
Query: 64 M------PARWRDSVCSNALISG-YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK-K 115
M P + + + A + ++ VG I ++ DV ++D + K +
Sbjct: 159 MIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGR 218
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G ++ A ++F+KMPE+N V WT M+ M+ + DLFL M G + TL+ +
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVI 278
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL---GFMDEANKVFSMMSKR 232
AC G Q+H R G D +G +I MY + G M A K+F +
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338
Query: 233 DAVSWNSLISGYVHNGEI-EEAYRLFERM------PGKDFVSWT---------------- 269
+ SW ++I+GYV G EEA LF M P S T
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398
Query: 270 -----------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
++I+ ++ G ++ + + F+++ EK+ +++ +I + N
Sbjct: 399 FTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNS 458
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EEA F E+ + + + T +S+LS +A+ T+ +G QIHA V+K ++ + S+ N+L
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNAL 518
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+S+YS+CGN+ A+++F ++++RN++S+ S+I+GFA++G +AL LF KM +EG+ PN+
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNE 578
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
+T+++VLSAC+HVGLV EG+ +FKSM T + + P EHYAC+VDILGR+GSL+EAI IN
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFIN 638
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
SM ++ VW LGA R H NL+L K AA+ ++E EP Y++LS+LY+ I K +
Sbjct: 639 SMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDE 698
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+ +R K K + K GCSW+ +++KVH F G S EI LQ +S K+ +
Sbjct: 699 VSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGY 758
Query: 613 -PKHDWSLLGLERD 625
P D+ L +E +
Sbjct: 759 VPNLDFVLHDVEEE 772
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 192/429 (44%), Gaps = 79/429 (18%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAM-VEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
DSV N+LIS Y K G+ E+A IF M +D+++W +MV +
Sbjct: 100 DSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCF---------------- 143
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
N + + A++ F+ M G N AC G
Sbjct: 144 -ANNNMGFRALLT--------------FVDMIENGYYPNEYCFAAATRACSTAEFVSVGD 188
Query: 189 QVHGLVSRFGF-DYDIILGNSIITMY--GRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+ G V + G+ D+ +G +I M+ GR G + A KVF M +R+AV+W +I+ +
Sbjct: 189 SIFGFVIKTGYLQSDVCVGCGLIDMFVKGR-GDLVSAFKVFEKMPERNAVTWTLMITRLM 247
Query: 246 HNGEIEEAYRLFERM------PGKDFVS-------------------------------- 267
G EA LF M P + +S
Sbjct: 248 QFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC 307
Query: 268 ----WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEM 322
M S G++ + ++F+ + + + +WTA+I+G+V Y EEA F M
Sbjct: 308 VGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM 367
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ V PN T SS L A A A L G Q+ H VK+ S + NSL+S+Y++ G +
Sbjct: 368 ILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRI 427
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
DA + F + E+N++SYN++I +A+N EEAL LF +++D+G+ + TF S+LS
Sbjct: 428 DDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGA 487
Query: 443 NHVGLVEEG 451
+G + +G
Sbjct: 488 ASIGTIGKG 496
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 162/368 (44%), Gaps = 71/368 (19%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM-PEKNVVAWTAMVDGYMKVDCFE 150
++ ++ ++ D V S++ Y K G+ +A IF M +++++W+AMV + +
Sbjct: 91 KLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGF 150
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF-DYDIILGNSI 209
F+ M G N AC G + G V + G+ D+ +G +
Sbjct: 151 RALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGL 210
Query: 210 ITMY--GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS 267
I M+ GR G++ A+++FE+MP ++ V+
Sbjct: 211 IDMFVKGR--------------------------------GDLVSAFKVFEKMPERNAVT 238
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
WT MIT G ++I+L F++M+
Sbjct: 239 WTLMITRLMQFGYAGEAIDL-------------------------------FLDMIFSGY 267
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC---GNVVD 384
P++ TLS V+SA A L G Q+H+ ++ + D + L+++Y+KC G++
Sbjct: 268 EPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA 327
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQN-GLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A +IF I + N+ S+ +MI+G+ Q G EEAL+LFR M ++PN TF S L AC
Sbjct: 328 ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACA 387
Query: 444 HVGLVEEG 451
++ + G
Sbjct: 388 NLAALRIG 395
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+NN + +A M+ + P+ T S L T + + G+ +H + + +++ D
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
NSL+SLYSKCG A IF + R+++S+++M+S FA N +G AL F M +
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEG 451
G PN+ F + AC+ V G
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVG 187
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/585 (33%), Positives = 325/585 (55%), Gaps = 98/585 (16%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
S SYN ++ AL + S+ +A +F MP++++VSY MI+ G+ A + P
Sbjct: 97 SFSYNTLLHAL-GVSSSLADARALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAP 155
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
+D+V N +++ Y++ GR +EA +F++ E D ++W +++ GY + ++ EA+++F
Sbjct: 156 E--KDAVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAISWNALMAGYVQCSQIEEAQKMF 213
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
++MP+++VV+W MV G+ RRG MA
Sbjct: 214 NRMPQRDVVSWNTMVSGH---------------ARRGDMA-------------------- 238
Query: 186 EGVQVHGLVSRFGFDY----DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+R FD D+ ++++ Y + G ++EA +VF M +++AVSWN+++
Sbjct: 239 --------EARRLFDVAPIRDVFTWTAVVSGYAQNGMLEEAKRVFDAMPEKNAVSWNAMM 290
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
+ YV +EEA LF+ MP ++ SW TM+TG++ G L+++ +F+MMP+KD V+W A
Sbjct: 291 AAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFDMMPQKDAVSWAA 350
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+++ + EE + F EM R
Sbjct: 351 MLAAYSQGGFSEETLQLFKEMGR------------------------------------- 373
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
++Y KCGN+ +A+ F ++ER+IVS+N+MI+G+A++G G+EAL +F
Sbjct: 374 -----------CAMYFKCGNMEEAHSAFEEMEERDIVSWNTMIAGYARHGFGKEALEVFD 422
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
M+ P+ IT + VL+AC+H GLVE+G YF SM + + PEHY CM+D+LGRA
Sbjct: 423 TMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVTAKPEHYTCMIDLLGRA 482
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L EA++L+ M FEP +WGALLGA R H N +L + AA+ + ELEP++A YV+LS
Sbjct: 483 GRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLS 542
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
++Y+ GK RD +++R+ + ++K PG SWI +++KVH F G
Sbjct: 543 NIYASSGKWRDVDKMRLMMHERGVKKVPGFSWIEVQNKVHTFSVG 587
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 186/372 (50%), Gaps = 64/372 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + S SYN MI++ N+ + A F P ++AVS+ M+ ++R G EA +L
Sbjct: 123 MPVKDSVSYNVMISSHANHGL-VSLARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDL 181
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ + W D++ NAL++GY++ + EEA ++F M ++DVV+W +MV G+ ++G + E
Sbjct: 182 F-DSRTEW-DAISWNALMAGYVQCSQIEEAQKMFNRMPQRDVVSWNTMVSGHARRGDMAE 239
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD P ++V WTA+V GY + E+ +F +M
Sbjct: 240 ARRLFDVAPIRDVFTWTAVVSGYAQNGMLEEAKRVFDAMP-------------------- 279
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ + + N+++ Y + M+EA ++F M R+ SWN++
Sbjct: 280 -------------------EKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTM 320
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF------------ 288
++GY G ++EA +F+ MP KD VSW M+ +S G E++++LF
Sbjct: 321 LTGYAQAGMLDEARAIFDMMPQKDAVSWAAMLAAYSQGGFSEETLQLFKEMGRCAMYFKC 380
Query: 289 -NM---------MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
NM M E+D V+W +I+G+ + +EA F M + +P+ +TL VL
Sbjct: 381 GNMEEAHSAFEEMEERDIVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVL 440
Query: 339 SASAATATLNQG 350
+A + + + +G
Sbjct: 441 AACSHSGLVEKG 452
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 164/343 (47%), Gaps = 53/343 (15%)
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE---------- 249
D ++I N IT + R G + +A ++F+ MS+R ++N+++ GY NG
Sbjct: 32 DAEVIRRNKAITAHMRAGRVPDAERLFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFRS 91
Query: 250 ---------------------IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
+ +A LF+ MP KD VS+ MI+ ++ G + + F
Sbjct: 92 IPRPDSFSYNTLLHALGVSSSLADARALFDEMPVKDSVSYNVMISSHANHGLVSLARHYF 151
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
++ PEKD V+W +++ ++ N + +EA F + T +S +A A
Sbjct: 152 DLAPEKDAVSWNGMLAAYIRNGRIQEARDLF----------DSRTEWDAISWNALMAGYV 201
Query: 349 QGSQIHAHVVKMNM--ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
Q SQI N + DV N++VS +++ G++ +A R+F R++ ++ +++SG
Sbjct: 202 QCSQIEEAQKMFNRMPQRDVVSWNTMVSGHARRGDMAEARRLFDVAPIRDVFTWTAVVSG 261
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+AQNG+ EEA +F M ++ N +++ ++++A ++EE F +M N+
Sbjct: 262 YAQNGMLEEAKRVFDAMPEK----NAVSWNAMMAAYVQRRMMEEAKELFDAMPC-RNVAS 316
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+ M+ +AG L EA + + M + W A+L A
Sbjct: 317 ----WNTMLTGYAQAGMLDEARAIFDMMP-QKDAVSWAAMLAA 354
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 329/586 (56%), Gaps = 16/586 (2%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S + A +F+T + I G +A L+ P R D V A+++ Y
Sbjct: 23 SYHGAAAVFSTDAFSHVQDPNRRIAELAAAGRVPDARRLFDRTPDR--DVVSWTAMVAAY 80
Query: 82 LKVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
+ G+ EA A + ++VV W +++ GY + RV EAR +FD+MPE+NVV+W M+
Sbjct: 81 ARQGQLHEASALLHRPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTML 140
Query: 141 DGYMKVDCFEDGFDLF--LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+ Y LF + +R G + IL A R E + L R
Sbjct: 141 EAYASAGRMGAACALFDGMPVRDAG------SWNILLAALVRSGTMDEARR---LFERMP 191
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ +++ ++I+ R G DEA +F M +R+ VSWN++ISGY N I+EA LF
Sbjct: 192 -ERNVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMISGYARNLRIDEALDLFM 250
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
MP +D SW MITGF +L+K+ ELF+ MP+++ V+WT +++G + + E A +
Sbjct: 251 NMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQV 310
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F ML +RPNQ+T + A + A L++G Q+H + K + D I++SL+ LY+K
Sbjct: 311 FNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAK 370
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG + A ++F E++++S+N MI+ +A +G G EA+ L+ KM++ PN +T++ +
Sbjct: 371 CGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGL 430
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSAC+H GLV+EG F+ M +I EHY+C++D+ RAG L +A LIN + +P
Sbjct: 431 LSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKP 490
Query: 499 PPG-VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
VW ALLG H N + LAA++L+E EPD+A Y +LS++Y+ GK ++ ++R
Sbjct: 491 TSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPDNAGTYTLLSNIYASAGKWKEAAKIR 550
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ + ++K PGCSWI L +KVH+F+A KS + + I LQ I
Sbjct: 551 SEMNDRGLKKQPGCSWIELANKVHVFVARDKSHSESELIYSLLQDI 596
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 213/407 (52%), Gaps = 17/407 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N ++ AL+ + ++ EA +F MP RN +S+ MI+G R G EA L
Sbjct: 159 MPVRDAGSWNILLAALVRSG-TMDEARRLFERMPERNVMSWTTMISGLARSGSADEARAL 217
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ V NA+ISGY + R +EA +F M E+DV +W M+ G+ + + +
Sbjct: 218 FDGMPE--RNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKK 275
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+E+FD+MP++NVV+WT M++G ++ + E +F M G+ N +T +A
Sbjct: 276 AQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSN 335
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
EG QVH ++ + F +D + +S++ +Y + G + A KVF + ++D +SWN +
Sbjct: 336 LAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGM 395
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKD- 295
I+ Y H+G EA L+E+M + V++ +++ S G +++ + +F M +
Sbjct: 396 IAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKS 455
Query: 296 ----DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
D ++ +I + ++A R I L+ ++P T+ S L A N+
Sbjct: 456 IAVRDEHYSCLIDLCSRAGRLDDAKR-LINGLK--LKPTSSTVWSAL-LGGCNAHGNESI 511
Query: 352 QIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRIFTNIDERNI 397
A + E D + +L+S +Y+ G +A +I + +++R +
Sbjct: 512 GDLAARNLLEAEPDNAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGL 558
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 208/610 (34%), Positives = 336/610 (55%), Gaps = 47/610 (7%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY-------VNMPARWRDSVCSNAL 77
++ +F+ +P +N VS++AMI G V+ E EL+ V + S+ +
Sbjct: 234 DSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCA 293
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
L++G+ E + ++ D++ + +D Y K GR+ +A+++ MP+ ++ ++
Sbjct: 294 ALSALRLGK-ELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYN 352
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
A++ GY + D F + + G+ F+ ITL+ AC EG QVHGL +
Sbjct: 353 AIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKS 412
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE----- 252
+I + N+I+ MYG+ + EA+ +F MM +RDAVSWN++I+ NG EE
Sbjct: 413 ISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHF 472
Query: 253 AYRLFERMPGKDFVSWTTMIT----------------------GFSS------------K 278
A + RM DF + + GF S
Sbjct: 473 ASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKC 532
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G +EK+ ++ + +K V+W AIISGF +Q E+A ++F ML V P+ T ++VL
Sbjct: 533 GMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVL 592
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A AT+ G QIHA ++K ++SDV I ++LV +YSKCGN+ D+ +F R+ V
Sbjct: 593 DTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFV 652
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++N+M+ G+A +GLGEEAL LF M+ + PN TF+SVL AC H+GLV++G YF M
Sbjct: 653 TWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVM 712
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+ Y ++P EHY+CMVDILGR+G + EA++L+ M FE +W LL + H N+++
Sbjct: 713 LSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEV 772
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
A+ A + L++L+P ++ V+LS++Y+ G + + +R + +++K PGCSWI LKD
Sbjct: 773 AEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKD 832
Query: 579 KVHLFLAGRK 588
+VH FL G K
Sbjct: 833 EVHAFLVGDK 842
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 259/509 (50%), Gaps = 45/509 (8%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN L+ Y+K + A ++F+ M +DVV++ S++ GY G + AR+ F +MPE++V
Sbjct: 87 SNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDV 146
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W +++ G+++ D+FL M R G+ F+ +L ++ +ACG GVQVHGL
Sbjct: 147 VSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGL 206
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V +FGFD D++ G++++ MY + +D++ VFS + +++ VSW+++I+G V N E
Sbjct: 207 VVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEG 266
Query: 254 YRLFERMP---------------------------------------GKDFVSWTTMITG 274
LF+ M G D + T +
Sbjct: 267 LELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDM 326
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ G + + ++ + MP+ ++ AII G+ +++ +A + F +L+ + +++TL
Sbjct: 327 YAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITL 386
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S L+A A+ +G Q+H VK S++ + N+++ +Y KC + +A +F ++
Sbjct: 387 SGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMER 446
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-I 453
R+ VS+N++I+ QNG EE L F M + P+ T+ SVL AC + G I
Sbjct: 447 RDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEI 506
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAGRT 512
+ + +K+ + A +VD+ + G + +A D I+ T + W A++ G
Sbjct: 507 HTRIIKSGMGFDSFVG--AALVDMYCKCGMIEKA-DKIHDRTEQKTMVSWNAIISGFSLL 563
Query: 513 HLNLDLAKLAAQHL-MELEPDSATPYVVL 540
+ D K ++ L M + PD+ T VL
Sbjct: 564 QQSEDAHKFFSRMLEMGVNPDNFTYAAVL 592
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 165/603 (27%), Positives = 277/603 (45%), Gaps = 100/603 (16%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F M +R+ VSY ++I+G+ G A + + MP R D V N++ISG+L+ G
Sbjct: 103 ACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPER--DVVSWNSVISGFLQNG 160
Query: 86 RCEEAARIFEAM---------------------------------------VEKDVVAWG 106
C ++ +F M + DVV
Sbjct: 161 ECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGS 220
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ Y K R+ ++ +F ++PEKN V+W+AM+ G ++ D +G +LF M+ G+
Sbjct: 221 ALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGV 280
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ LF +C R G ++H + F DII+G + + MY + G M +A KV
Sbjct: 281 SQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVL 340
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSS-KGNL 281
S M K S+N++I GY + +A + F+ + G D ++ + + +S +G+L
Sbjct: 341 SSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDL 400
Query: 282 E---------KSI-------------------------ELFNMMPEKDDVTWTAIISGFV 307
E KSI +LF+MM +D V+W AII+
Sbjct: 401 EGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACE 460
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EE F M+ + P+ T SVL A A LN G +IH ++K M D
Sbjct: 461 QNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSF 520
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ +LV +Y KCG + A +I +++ +VS+N++ISGF+ E+A F +M + G
Sbjct: 521 VGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMG 580
Query: 428 LVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSL 484
+ P+ T+ +VL C ++ V G I+ + +K E + Y C +VD+ + G++
Sbjct: 581 VNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQ----ELQSDVYICSTLVDMYSKCGNM 636
Query: 485 AEAIDLINSMTFEPPPG----VWGALLGAGRTHLNLD---LAKLAAQHLMELEPDSATPY 537
++ + FE P W A+L G H L L + L+ ++P+ AT
Sbjct: 637 QDS-----QLMFEKAPNRDFVTWNAML-CGYAHHGLGEEALKLFESMQLVNVKPNHATFV 690
Query: 538 VVL 540
VL
Sbjct: 691 SVL 693
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 167/328 (50%), Gaps = 38/328 (11%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + +++ C + G Q H + GF+ + N ++ MY + ++D A KVF M
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
RD VS+NS+ISGY GE++ A + F MP +D VSW ++I+GF G KSI++
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDV-- 168
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
F+EM R V ++ +L+ VL A A +
Sbjct: 169 -----------------------------FLEMGRCGVGFDRASLAVVLKACGALEECDM 199
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G Q+H VVK + DV ++L+ +Y+KC + D+ +F+ + E+N VS+++MI+G Q
Sbjct: 200 GVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQ 259
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLY--NIEP 466
N E L LF++M+ G+ +Q + S+ +C + + G ++ ++K+ + +I
Sbjct: 260 NDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIV 319
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSM 494
G +D+ + G +A+A +++SM
Sbjct: 320 GTA----TLDMYAKCGRMADAQKVLSSM 343
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/656 (31%), Positives = 350/656 (53%), Gaps = 46/656 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW- 68
NA++T L + + A ++F+ M ++ VS+ ++I+G ++G A EL+ M +
Sbjct: 252 NALVT-LYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYL 310
Query: 69 -RDSVCSNALISGYLKVGRCEEAAR----IFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
D V +L+S G + + + +A + D++ G+++D Y + A E
Sbjct: 311 KPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHE 370
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F +NVV W M+ + K+D + F +F M+ G+ N T + C
Sbjct: 371 MFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGA 430
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G Q+H V + GF +++ + + +I MY + G +D A+ + +++ D VSW +LISG
Sbjct: 431 LDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISG 490
Query: 244 YVHNGEIEEAYRLFERMPGK----DFVSWTTMITG------------------------- 274
Y + EA + F+ M + D + +++ I+
Sbjct: 491 YAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSED 550
Query: 275 ----------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
++ G ++++ F + KD ++W +ISGF + E+A + F +M R
Sbjct: 551 LSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNR 610
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ + T S +SA+A A + QG QIHA ++K +SD+ + N+L++ Y+KCG++ D
Sbjct: 611 AKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIED 670
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A R F + E+N VS+N+MI+G++Q+G G EA+NLF KMK G +PN +TF+ VLSAC+H
Sbjct: 671 ARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSH 730
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
VGLV +G YF+SM + + P P HYAC+VD++ RAG L+ A I M EP +W
Sbjct: 731 VGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWR 790
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LL A H N+++ + AAQHL+ELEP+ + YV+LS++Y+V GK ++ R + +
Sbjct: 791 TLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRG 850
Query: 565 IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
++K PG SWI +K+ VH F G + +I L ++K E + + +SLL
Sbjct: 851 VKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLL 906
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 229/485 (47%), Gaps = 47/485 (9%)
Query: 13 ITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PA 66
+ L N I A ++F + +++VS+ AMI+GF + G EA L+ M P
Sbjct: 153 LIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPT 212
Query: 67 RWR-DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
+ SV S VG + A +F+ + ++V Y + + A ++F
Sbjct: 213 PYVFSSVLSGCTKIKLFDVGE-QLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVF 271
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
KM K+ V++ +++ G + + +LF M+R + + +T+ L AC
Sbjct: 272 SKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALC 331
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+G Q+H V + G D+I+ +++ +Y + A+++F + V WN ++ +
Sbjct: 332 KGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFG 391
Query: 246 HNGEIEEAYRLFERMPGKDFVS-------------------------------------- 267
+ E++R+F +M K +
Sbjct: 392 KLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVY 451
Query: 268 -WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+ +I ++ G L+ + + + E D V+WTA+ISG+ + + EA + F EML +
Sbjct: 452 VCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRG 511
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
++ + + SS +SA A LNQG QIHA D+SI N+LVSLY++CG + +AY
Sbjct: 512 IQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAY 571
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
F ID ++ +S+N +ISGFAQ+G E+AL +F +M L + TF S +SA ++
Sbjct: 572 LEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIA 631
Query: 447 LVEEG 451
+++G
Sbjct: 632 NIKQG 636
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 236/507 (46%), Gaps = 49/507 (9%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGY 81
++F MP R+ S+ +I+GF+ + M +L+ M P + A
Sbjct: 66 KVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHR 125
Query: 82 LKVGRCEE-AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
+ + E+ ARI + + ++ Y K G +I AR++FD + K+ V+W AM+
Sbjct: 126 IGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMI 185
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
G+ + E+ LF M G+ + + C + + G Q+H LV ++G
Sbjct: 186 SGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSS 245
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ + N+++T+Y R+ A KVFS M +D VS+NSLISG G + A LF +M
Sbjct: 246 LETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKM 305
Query: 261 P----GKDFVSWTTMITGFSSKGNLEK--------------------------------- 283
D V+ ++++ +S G L K
Sbjct: 306 KRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDI 365
Query: 284 --SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ E+F ++ V W ++ F + E+FR F +M K + PNQ T S+L
Sbjct: 366 KTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTC 425
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ L+ G QIH V+K + +V + + L+ +Y+K G + A+ I + E ++VS+
Sbjct: 426 TSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWT 485
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT 460
++ISG+AQ+ L EAL F++M + G+ + I F S +SAC + + +G I+ +S +
Sbjct: 486 ALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVS 545
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEA 487
Y+ + + +V + R G + EA
Sbjct: 546 GYSEDLSIGN--ALVSLYARCGRIKEA 570
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 223/470 (47%), Gaps = 51/470 (10%)
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
V +VD Y G + ++F+ MP ++V +W ++ G+M+ DLF M
Sbjct: 46 VLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEE 105
Query: 163 GMAFNSITLTILFEAC-GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
++ I+ + AC G R Q+H + G I+ N +I +Y + G +
Sbjct: 106 NVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIIS 165
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-------------------- 261
A KVF + +D+VSW ++ISG+ NG EEA LF M
Sbjct: 166 ARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTK 225
Query: 262 -----------------GKDFVSWT--TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
G ++ ++T +S N + ++F+ M KD+V++ ++
Sbjct: 226 IKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSL 285
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
ISG + A F +M R ++P+ +T++S+LSA A+ L +G Q+H++V+K +
Sbjct: 286 ISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGI 345
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
SD+ ++ +L+ LY C ++ A+ +F N+V +N M+ F + E+ +FR+
Sbjct: 346 SSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQ 405
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYAC--MVDILG 479
M+ +GL+PNQ T+ S+L C VG ++ G I+ + +KT + Y C ++D+
Sbjct: 406 MQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNV----YVCSVLIDMYA 461
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
+ G L A ++ ++T E W AL+ H +L A +H E+
Sbjct: 462 KHGKLDTAHVILRTLT-EDDVVSWTALISGYAQH---NLFAEALKHFKEM 507
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 152/333 (45%), Gaps = 40/333 (12%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M G+ N T L + C E ++HG + + GF + +L N ++ +Y LG
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD-------FVSWTTM 271
+D KVF M R SW+ +ISG++ LF M ++ F S
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 272 ITG---------------------------------FSSKGNLEKSIELFNMMPEKDDVT 298
+G ++ G + + ++F+ + KD V+
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISGF N EEA F EM + P SSVLS + G Q+HA V
Sbjct: 181 WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVF 240
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K + + N+LV+LYS+ N V A ++F+ + ++ VS+NS+ISG AQ G + AL
Sbjct: 241 KYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALE 300
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
LF KMK + L P+ +T S+LSAC G + +G
Sbjct: 301 LFTKMKRDYLKPDCVTVASLLSACASNGALCKG 333
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G + V ++ + + G+L+ +++F MP + +W IISGF+ + F
Sbjct: 42 GNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSC 101
Query: 322 MLRKDVRPNQLTLSSVLSA-SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M+ ++V P +++ +SVL A S + QIHA ++ + I N L+ LY+K G
Sbjct: 102 MIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNG 161
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
++ A ++F N+ ++ VS+ +MISGF+QNG EEA++LF +M G+ P F SVLS
Sbjct: 162 LIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLS 221
Query: 441 ACNHVGLVEEG-------FIYFKSMKT 460
C + L + G F Y S++T
Sbjct: 222 GCTKIKLFDVGEQLHALVFKYGSSLET 248
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/511 (35%), Positives = 303/511 (59%), Gaps = 32/511 (6%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN LI+ Y K G+ EA ++F+ M +++ +W +M+ GY K G + AR++FDKMPEK+V
Sbjct: 98 SNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDV 157
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W MV + + +++ + R+ G+ N + + C + QVHG
Sbjct: 158 VSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQ 217
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ GF +++L +S++ Y + G M +A
Sbjct: 218 ILVAGFLSNVVLSSSVLDAYVKCGLMGDAR------------------------------ 247
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+LF+ M +D ++WTTM++G++ G+++ + ELF MPEK+ V+WTA+ISG+ N
Sbjct: 248 -KLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGH 306
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+A F +M+ VRP+Q T SS L A A+ A+L G QIHA+++++N + + + ++L+
Sbjct: 307 KALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALI 366
Query: 374 SLYSKCGNVVDAYRIFTNIDER-NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+YSKCG++ ++F + + ++V +N++IS AQ+G GEEA+ + M G P++
Sbjct: 367 DMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDK 426
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
ITF+ +L+AC+H GLV++G +F+SM Y I P EHYAC++D+LGRAG E +D +
Sbjct: 427 ITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLE 486
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
M ++P VW ALLG R H +++L + AA+ L+ELEP S+T YV+LS +Y+V+G+
Sbjct: 487 KMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWES 546
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+VR ++++K SW+ +++KVH F
Sbjct: 547 VQKVRQLMNERQVKKERAISWLEIENKVHSF 577
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 186/421 (44%), Gaps = 72/421 (17%)
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD-IILGNSIITMYGRL 216
++ R G+ +S TL L + C REG +VH + G L N +I MY +
Sbjct: 49 NLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKC 108
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFS 276
G EA KVF MS R+ SWN+++SGY G I+ A +LF++MP KD VSW TM+ +
Sbjct: 109 GKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHA 168
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G ++EA R++ E + ++ N + +
Sbjct: 169 QCG-------------------------------YWDEALRFYSEFRQLGIQCNGFSFAG 197
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR--------- 387
VL+ + Q+H ++ S+V + +S++ Y KCG + DA +
Sbjct: 198 VLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARD 257
Query: 388 ----------------------IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+F + E+N VS+ ++ISG+A+NG+G +AL LF KM
Sbjct: 258 VLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMML 317
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
+ P+Q TF S L AC + ++ G + + N +P + ++D+ + GSL
Sbjct: 318 FHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRI-NFQPNTIVVSALIDMYSKCGSLG 376
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL-----EPDSATPYVVL 540
+ + M + +W ++ A H + A Q L ++ +PD T V+L
Sbjct: 377 IGRKVFDLMGNKLDVVLWNTIISALAQH---GCGEEAIQMLDDMVRSGAKPDKITFVVIL 433
Query: 541 S 541
+
Sbjct: 434 N 434
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 150/303 (49%), Gaps = 14/303 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIY-EAFEIFATMPMR----NAVSYAAMITGFVRRGMFY 55
M ++ S+N M+ A + C + EA ++ N S+A ++T V+
Sbjct: 152 MPEKDVVSWNTMVIA--HAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVG 209
Query: 56 EAEELY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+++ + + + V S++++ Y+K G +A ++F+ M +DV+AW +MV GY
Sbjct: 210 LTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYA 269
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G + A E+F +MPEKN V+WTA++ GY + +LF M + + T +
Sbjct: 270 KWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSS 329
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM-SKR 232
AC + G Q+H + R F + I+ +++I MY + G + KVF +M +K
Sbjct: 330 CLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKL 389
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELF 288
D V WN++IS +G EEA ++ + M D +++ ++ S G +++ + F
Sbjct: 390 DVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFF 449
Query: 289 NMM 291
M
Sbjct: 450 ESM 452
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 213/595 (35%), Positives = 336/595 (56%), Gaps = 54/595 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN I Y K GR A + F+ + + +V ++ +++ Y K+ R + A ++FD++PE ++
Sbjct: 46 SNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDL 105
Query: 134 VAWTAMVDGYMKVDCFEDG--FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV--Q 189
V++ ++ Y DC E LF MR G+ + TL+ + AC G+ Q
Sbjct: 106 VSYNTLISAY--ADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDV----GLIGQ 159
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNG 248
+H + GFD + + N+++T YG+ G +D+A +VF M RD VSWNS+I Y +
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQ 219
Query: 249 EIEEAYRLFERMPGK----DFVSWTTMITGFSS--------------------------- 277
E +A LF+ M + D + +++T F+
Sbjct: 220 EGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGS 279
Query: 278 ---------KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEMLRKDV 327
G + ++F + E D V W ++SG+ NE++ E+A F +M
Sbjct: 280 GLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGY 339
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAY 386
RPN + V+SA + ++ +QG QIH+ +K ++ S+ +S+ N+L+++YSKCGN+ DA
Sbjct: 340 RPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDAR 399
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
R+F + E N VS NSMI+G+AQ+G+ E+L+LF+ M + + P ITF+SVLSAC H G
Sbjct: 400 RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTG 459
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
VEEG+ YF MK +NIEP EHY+CM+D+LGRAG L+EA +LI M F P W +L
Sbjct: 460 RVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASL 519
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
LGA RTH N++LA AA +++LEP +A PYVVLS++Y+ G+ + VR + + ++
Sbjct: 520 LGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVK 579
Query: 567 KSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
K PGCSWI +K ++H+F+A S +KEI L+ +S K + P W+L+
Sbjct: 580 KKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALV 634
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 150/336 (44%), Gaps = 71/336 (21%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H L + N I +Y + G + A K F +S + S+N++I+ Y
Sbjct: 27 GKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAK 86
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVTWTAI 302
A++LF+++P D VS+ T+I+ ++ G ++ LF+ M E D T +A+
Sbjct: 87 ESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAV 146
Query: 303 I-------------------SGF-----VNNE---------QYEEAFRWFIEM--LRKDV 327
I SGF VNN ++A R F M +R +V
Sbjct: 147 ITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEV 206
Query: 328 RPNQL------------------------------TLSSVLSASAATATLNQGSQIHAHV 357
N + TL+SVL+A L+ G Q H +
Sbjct: 207 SWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQL 266
Query: 358 VKMNMESDVSIQNSLVSLYSKC-GNVVDAYRIFTNIDERNIVSYNSMISGFAQN-GLGEE 415
+K + + + L+ LYSKC G + D ++F I E ++V +N+M+SG++QN E+
Sbjct: 267 IKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
AL FR+M+ G PN +F+ V+SAC+++ +G
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQG 362
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 32/146 (21%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV-------------- 382
+L A L+ G +H+ +K + N + LYSKCG +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 383 -----------------VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ A+++F I E ++VSYN++IS +A G AL LF M++
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 426 EGLVPNQITFLSVLSA-CNHVGLVEE 450
GL + T +V++A C+ VGL+ +
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIGQ 159
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 341/634 (53%), Gaps = 80/634 (12%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+A ++F MP RN ++ ++I+ + G EA L+ +MP D N+++SG+ +
Sbjct: 68 DARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEP--DQCSWNSMVSGFAQH 125
Query: 85 GRCEEAARIF----------------------------------EAMVEK-----DVVAW 105
R EE+ F A+V K DV
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+++D Y K G V A E+F M E+N+V W +++ Y + + ++F+ M G+
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMDEANK 224
+ +TL + AC +EG+Q+H V + F D++LGN+++ MY +
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCS------- 298
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKS 284
++ EA R+F+RM ++ VS T+M++G++ +++ +
Sbjct: 299 ------------------------KVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAA 334
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+F+ M +++ V+W A+I+G+ N + EEA R F + R+ + P T ++LSA A
Sbjct: 335 RFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANL 394
Query: 345 ATLNQGSQIHAHVVKMNME------SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A L G Q H HV+K E SD+ + NSL+ +Y KCG++ D R+F + ER+ V
Sbjct: 395 ADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCV 454
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N++I G+AQNG G EAL +FRKM G P+ +T + VL AC+H GLVEEG YF SM
Sbjct: 455 SWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM 514
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+ + + P +HY CMVD+LGRAG L EA +LI +M P VWG+LL A + H N+++
Sbjct: 515 EE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEM 573
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
K AA+ L+E++P ++ PYV+LS++Y+ +G+ D RVR + + + K PGCSWI ++
Sbjct: 574 GKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVES 633
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+VH+FL KS K+I L+ +++ K +
Sbjct: 634 RVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGY 667
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 163/295 (55%), Gaps = 32/295 (10%)
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
NS L ++C R R VH + F +I + N +I +YG+ +D+A K
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK-- 71
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
LF+RMP ++ +W ++I+ + G L+++
Sbjct: 72 -----------------------------LFDRMPQRNTFTWNSLISVLTKSGFLDEAAR 102
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
LF MPE D +W +++SGF ++++EE+ +F++M R+D N+ + S LSA A
Sbjct: 103 LFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMD 162
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
LN G+Q+HA V K +DV + ++L+ +YSKCG+V A +F+ + ERN+V++NS+I+
Sbjct: 163 LNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITC 222
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT 460
+ QNG EAL +F +M D GL P+++T SV+SAC + ++EG I+ + +KT
Sbjct: 223 YEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKT 277
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 185/400 (46%), Gaps = 66/400 (16%)
Query: 12 MITALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---- 64
M +ALI+ + C S+ A E+F+ M RN V++ ++IT + + G EA E++V M
Sbjct: 184 MGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSG 243
Query: 65 ---------------------------------PARWRDS-VCSNALISGYLKVGRCEEA 90
++RD V NAL+ Y K + EA
Sbjct: 244 LEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEA 303
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
R+F+ M ++VV+ SMV GY + V AR +F KM ++NVV+W A++ GY + E
Sbjct: 304 RRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENE 363
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY------DII 204
+ LF ++R + T L AC G Q H V + GF++ DI
Sbjct: 364 EALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIF 423
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM---- 260
+GNS+I MY + G +++ ++VF M +RD VSWN++I GY NG EA ++F +M
Sbjct: 424 VGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCG 483
Query: 261 PGKDFVSWTTMITGFSSKGNLEK------SIELFNMMPEKDDVTWTAIISGFVN--NEQY 312
D V+ ++ S G +E+ S+E ++P KD T + G NE
Sbjct: 484 EKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEA- 542
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+ IE + V P+ + S+L+A + G
Sbjct: 543 ----KNLIEAM--PVNPDAVVWGSLLAACKVHGNIEMGKH 576
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 41/265 (15%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
++R PN + +L + + + +HA ++ ++ IQN L+ +Y KC
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 382 VVDAYRIFTNIDERNI-------------------------------VSYNSMISGFAQN 410
+ DA ++F + +RN S+NSM+SGFAQ+
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF---IYFKSMKTLYNIEPG 467
EE+L F KM E + N+ +F S LSAC GL++ ++ K+ Y+ +
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSAC--AGLMDLNMGTQVHALVSKSRYSTD-- 181
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
+ ++D+ + GS+A A ++ + M E W +L+ + A +M
Sbjct: 182 VYMGSALIDMYSKCGSVACAEEVFSGM-IERNLVTWNSLITCYEQNGPASEALEVFVRMM 240
Query: 528 E--LEPDSATPYVVLSDLYSVIGKK 550
+ LEPD T V+S S+ K
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALK 265
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 203/613 (33%), Positives = 342/613 (55%), Gaps = 23/613 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M++R ++N M++ LI N + EA ++F MP+RN+VS+AA++TG+ R G EA EL
Sbjct: 60 MSERNVFTWNCMVSGLIRNRM-LAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEAREL 118
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ +P R + V NA++SGY + G + A +F+ M +D V+W +M+ GY K+ V E
Sbjct: 119 FNRIPDR--NVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVRE 176
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
ARE+FD MP A++ GY+++ LF M+ N ++ ++ R
Sbjct: 177 ARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQ----TRNPVSWNVMITGYAR 232
Query: 181 FFRYREGVQVHGLVSRFGFD----YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
G+ R FD D++ +I+ Y + G +D A KVF M RD V+
Sbjct: 233 -------AGSMGIAQRL-FDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVA 284
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
WN+++ G+V N +++A +LF MP +D +SW ++ G+ +G+++ + F P KD
Sbjct: 285 WNTMMDGFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSANAWFRRAPNKDA 344
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
++W +ISG+ + E A EM+R ++P+Q TLS V+S A+ +L G +H
Sbjct: 345 ISWNTLISGYKD----EGALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLW 400
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+K E D + +SL+S+YSKCG + +A ++F I +R+ V++N+MI+ +A +GL +EA
Sbjct: 401 AIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEA 460
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L +F M G P+ TFLS+LSAC H G + EG +F+SM+ +N+ P +HY+CMVD
Sbjct: 461 LKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVD 520
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+LGR+G + +A D + + W L +H + L ++ A+++++ P
Sbjct: 521 LLGRSGFIHQAYDFTRRIPSDHRTTAWETLFSVCNSHGEIQLGEIIARNVLKARPSDGGM 580
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
Y +LS++Y+ VR K + ++K GCSWI LK +V F + + +++I
Sbjct: 581 YTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSNHPLIEQI 640
Query: 597 EVTLQTISKGTKE 609
+ +IS +E
Sbjct: 641 CQEVDSISVMIEE 653
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 141/313 (45%), Gaps = 66/313 (21%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN-------------- 247
D+ N+ I + R G + A +VF MS+R+ +WN ++SG + N
Sbjct: 33 DVFQSNTAINEHFRAGRVAAARRVFDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAMP 92
Query: 248 -----------------GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
G + EA LF R+P ++ VSW M++G++ G ++++ ELF+M
Sbjct: 93 VRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDM 152
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP +DDV+W +ISG++ + EA F M P +++LS +
Sbjct: 153 MPWRDDVSWLTMISGYIKRKHVREARELFDSM----PSPPTSVCNALLSGYVELGYMRAA 208
Query: 351 SQIHAHVVKMN---------------------------MESDVSIQNSLVSLYSKCGNVV 383
+ + N E DV + +++ Y + G+V
Sbjct: 209 EVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVD 268
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A+++F ++ R+ V++N+M+ GF +N ++AL LF +M D +QI++ ++L
Sbjct: 269 AAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDR----DQISWNAILQGYV 324
Query: 444 HVGLVEEGFIYFK 456
G ++ +F+
Sbjct: 325 QQGDMDSANAWFR 337
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 56/189 (29%)
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ M E++ TW ++SG + N EA + F D P + ++S
Sbjct: 57 FDEMSERNVFTWNCMVSGLIRNRMLAEARKVF------DAMPVRNSVSWA---------- 100
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
+L++ Y++CG V +A +F I +RN+VS+N+M+SG+
Sbjct: 101 -----------------------ALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGY 137
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI---YFKSMKTLYNI 464
A+NG+ + A LF M + +++L+++S G+I + + + L++
Sbjct: 138 ARNGMVKRARELFDMMPWR----DDVSWLTMIS----------GYIKRKHVREARELFDS 183
Query: 465 EPGPEHYAC 473
P P C
Sbjct: 184 MPSPPTSVC 192
>gi|125548358|gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 204/613 (33%), Positives = 343/613 (55%), Gaps = 23/613 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M++R ++N M++ LI N + EA ++F MP+RN+VS+AA++TG+ R G EA EL
Sbjct: 60 MSERNVFTWNCMVSGLIRNRM-LAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEAREL 118
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ +P R + V NA++SGY + G + A +F+ M +D V+W +M+ GY K+ V E
Sbjct: 119 FNRIPDR--NVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVRE 176
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
ARE+FD MP A++ GY+++ LF M+ N ++ ++ R
Sbjct: 177 ARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQ----TRNPVSWNVMITGYAR 232
Query: 181 FFRYREGVQVHGLVSRFGFD----YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
G+ R FD D++ +I+ Y + G +D A KVF M RD V+
Sbjct: 233 -------AGSMGIAQRL-FDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVA 284
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
WN+++ G+V N +++A +LF MP +D +SW ++ G+ +G+++ + F P KD
Sbjct: 285 WNTMMDGFVRNDRLDDALKLFSEMPDRDQISWHAILQGYVQQGDMDSANVWFPRAPNKDA 344
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
++W +ISG+ + E A EM+R ++P+Q TLS V+S A+ +L G +H
Sbjct: 345 ISWNTLISGYKD----EGALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLW 400
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+K E D + +SL+S+YSKCG + +A ++F I +R+ V++N+MI+ +A +GL +EA
Sbjct: 401 AIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEA 460
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L +F M G P+ TFLS+LSAC H G + EG +F+SM+ +N+ P +HY+CMVD
Sbjct: 461 LKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVD 520
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+LGR+G + +A D + + W L A +H + L ++ A+++++ P
Sbjct: 521 LLGRSGFIHQAYDFTRRIPSDHRTTAWETLFSACNSHGEIQLGEIIARNVLKARPSDGGM 580
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
Y +LS++Y+ VR K + ++K GCSWI LK +V F + + +++I
Sbjct: 581 YTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSNHPLIEQI 640
Query: 597 EVTLQTISKGTKE 609
+ +IS +E
Sbjct: 641 CQEVDSISVMIEE 653
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 141/312 (45%), Gaps = 66/312 (21%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN-------------- 247
D+ N+ I + R G + A +VF MS+R+ +WN ++SG + N
Sbjct: 33 DVFQSNTAINEHFRAGRVAAARRVFDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAMP 92
Query: 248 -----------------GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
G + EA LF R+P ++ VSW M++G++ G ++++ ELF+M
Sbjct: 93 VRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDM 152
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP +DDV+W +ISG++ + EA F M P +++LS +
Sbjct: 153 MPWRDDVSWLTMISGYIKRKHVREARELFDSM----PSPPTSVCNALLSGYVELGYMRAA 208
Query: 351 SQIHAHVVKMN---------------------------MESDVSIQNSLVSLYSKCGNVV 383
+ + N E DV + +++ Y + G+V
Sbjct: 209 EVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVD 268
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A+++F ++ R+ V++N+M+ GF +N ++AL LF +M D +QI++ ++L
Sbjct: 269 AAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDR----DQISWHAILQGYV 324
Query: 444 HVGLVEEGFIYF 455
G ++ ++F
Sbjct: 325 QQGDMDSANVWF 336
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 56/189 (29%)
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ M E++ TW ++SG + N EA + F M VR N ++ +++L+
Sbjct: 57 FDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAM---PVR-NSVSWAALLTG------- 105
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
Y++CG V +A +F I +RN+VS+N+M+SG+
Sbjct: 106 ----------------------------YARCGRVAEARELFNRIPDRNVVSWNAMVSGY 137
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI---YFKSMKTLYNI 464
A+NG+ + A LF M + +++L+++S G+I + + + L++
Sbjct: 138 ARNGMVKRARELFDMMPWR----DDVSWLTMIS----------GYIKRKHVREARELFDS 183
Query: 465 EPGPEHYAC 473
P P C
Sbjct: 184 MPSPPTSVC 192
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 213/595 (35%), Positives = 336/595 (56%), Gaps = 54/595 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN I Y K GR A + F+ + + +V ++ +++ Y K+ R + A ++FD++PE ++
Sbjct: 46 SNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDL 105
Query: 134 VAWTAMVDGYMKVDCFEDG--FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV--Q 189
V++ ++ Y DC E LF MR G+ + TL+ + AC G+ Q
Sbjct: 106 VSYNTLISAY--ADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDV----GLIGQ 159
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNG 248
+H + GFD + + N+++T YG+ G +D+A +VF M RD VSWNS+I Y +
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQ 219
Query: 249 EIEEAYRLFERMPGK----DFVSWTTMITGFSS--------------------------- 277
E +A LF+ M + D + +++T F+
Sbjct: 220 EGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGS 279
Query: 278 ---------KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEMLRKDV 327
G + ++F + E D V W ++SG+ NE++ E+A F +M
Sbjct: 280 GLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGY 339
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAY 386
RPN + V+SA + ++ +QG QIH+ +K ++ S+ +S+ N+L+++YSKCGN+ DA
Sbjct: 340 RPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDAR 399
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
R+F + E N VS NSMI+G+AQ+G+ E+L+LF+ M + + P ITF+SVLSAC H G
Sbjct: 400 RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTG 459
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
VEEG+ YF MK +NIEP EHY+CM+D+LGRAG L+EA +LI M F P W +L
Sbjct: 460 RVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASL 519
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
LGA RTH N++LA AA +++LEP +A PYVVLS++Y+ G+ + VR + + ++
Sbjct: 520 LGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVK 579
Query: 567 KSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
K PGCSWI +K ++H+F+A S +KEI L+ +S K + P W+L+
Sbjct: 580 KKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALV 634
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 150/336 (44%), Gaps = 71/336 (21%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H L + N I +Y + G + A K F +S + S+N++I+ Y
Sbjct: 27 GKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAK 86
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVTWTAI 302
A++LF+++P D VS+ T+I+ ++ G ++ LF+ M E D T +A+
Sbjct: 87 ESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAV 146
Query: 303 I-------------------SGF-----VNNE---------QYEEAFRWFIEM--LRKDV 327
I SGF VNN ++A R F M +R +V
Sbjct: 147 ITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEV 206
Query: 328 RPNQL------------------------------TLSSVLSASAATATLNQGSQIHAHV 357
N + TL+SVL+A L+ G Q H +
Sbjct: 207 SWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQL 266
Query: 358 VKMNMESDVSIQNSLVSLYSKC-GNVVDAYRIFTNIDERNIVSYNSMISGFAQN-GLGEE 415
+K + + + L+ LYSKC G + D ++F I E ++V +N+M+SG++QN E+
Sbjct: 267 IKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
AL FR+M+ G PN +F+ V+SAC+++ +G
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQG 362
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 32/146 (21%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV-------------- 382
+L A L+ G +H+ +K + N + LYSKCG +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 383 -----------------VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ A+++F I E ++VSYN++IS +A G AL LF M++
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 426 EGLVPNQITFLSVLSA-CNHVGLVEE 450
GL + T +V++A C+ VGL+ +
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLIGQ 159
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 222/674 (32%), Positives = 363/674 (53%), Gaps = 56/674 (8%)
Query: 6 SASYNAMITALINNNCSIYE-AFEIFATM-PMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
S + N++I+ + + C +E A IF M R+ +S++AM++ F M + A +V+
Sbjct: 101 SVTLNSLIS--LYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVD 158
Query: 64 M------PARWRDSVCSNALISG-YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK-K 115
M P + + + A + ++ VG + ++ DV ++D + K +
Sbjct: 159 MIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGR 218
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G ++ A ++F+KMPE+N V WT M+ M+ + DLFL M G + TL+ +
Sbjct: 219 GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVI 278
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL---GFMDEANKVFSMMSKR 232
AC G Q+H R G D +G +I MY + G M A K+F +
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338
Query: 233 DAVSWNSLISGYVHNGEI-EEAYRLFERM------PGKDFVSWT---------------- 269
+ SW ++I+GYV G EEA LF M P S T
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398
Query: 270 -----------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
++I+ ++ G ++ + + F+++ EK+ +++ +I + N
Sbjct: 399 FTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNS 458
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EEA F E+ + + + T +S+LS +A+ T+ +G QIHA V+K ++ + S+ N+L
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNAL 518
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+S+YS+CGN+ A+++F ++++RN++S+ S+I+GFA++G +AL LF KM +EG+ PN
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNL 578
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
+T+++VLSAC+HVGLV EG+ +FKSM T + + P EHYACMVDILGR+GSL+EAI IN
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFIN 638
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
SM ++ VW LGA R H NL+L K AA+ ++E EP Y++LS+LY+ K +
Sbjct: 639 SMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDE 698
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+ +R K K + K GCSW+ +++KVH F G S EI LQ +S K+ +
Sbjct: 699 VSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGY 758
Query: 613 -PKHDWSLLGLERD 625
P D+ L +E +
Sbjct: 759 VPNLDFVLHDVEEE 772
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 193/429 (44%), Gaps = 79/429 (18%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAM-VEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
DSV N+LIS Y K G+ E+A IF+ M +D+++W +MV +
Sbjct: 100 DSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCF---------------- 143
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
N + + A++ F+ M G N AC G
Sbjct: 144 -ANNNMGFRALLT--------------FVDMIENGYYPNEYCFAAATRACSTAEFVSVGD 188
Query: 189 QVHGLVSRFGF-DYDIILGNSIITMY--GRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+ G V + G+ D+ +G +I M+ GR G + A KVF M +R+AV+W +I+ +
Sbjct: 189 SIFGFVVKTGYLQSDVCVGCGLIDMFVKGR-GDLVSAFKVFEKMPERNAVTWTLMITRLM 247
Query: 246 HNGEIEEAYRLFERM------PGKDFVS-------------------------------- 267
G EA LF M P + +S
Sbjct: 248 QFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC 307
Query: 268 ----WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEM 322
M S G++ + ++F+ + + + +WTA+I+G+V Y EEA F M
Sbjct: 308 VGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM 367
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ V PN T SS L A A A L G Q+ H VK+ S + NSL+S+Y++ G +
Sbjct: 368 ILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRI 427
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
DA + F + E+N++SYN++I +A+N EEAL LF +++D+G+ + TF S+LS
Sbjct: 428 DDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGA 487
Query: 443 NHVGLVEEG 451
+G + +G
Sbjct: 488 ASIGTIGKG 496
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 162/368 (44%), Gaps = 71/368 (19%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM-PEKNVVAWTAMVDGYMKVDCFE 150
++ ++ ++ D V S++ Y K G+ +A IF M +++++W+AMV + +
Sbjct: 91 KLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGF 150
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF-DYDIILGNSI 209
F+ M G N AC G + G V + G+ D+ +G +
Sbjct: 151 RALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGL 210
Query: 210 ITMY--GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS 267
I M+ GR G++ A+++FE+MP ++ V+
Sbjct: 211 IDMFVKGR--------------------------------GDLVSAFKVFEKMPERNAVT 238
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
WT MIT G ++I+L F+EM+
Sbjct: 239 WTLMITRLMQFGYAGEAIDL-------------------------------FLEMILSGY 267
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC---GNVVD 384
P++ TLS V+SA A L G Q+H+ ++ + D + L+++Y+KC G++
Sbjct: 268 EPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA 327
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQN-GLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A +IF I + N+ S+ +MI+G+ Q G EEAL+LFR M ++PN TF S L AC
Sbjct: 328 ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACA 387
Query: 444 HVGLVEEG 451
++ + G
Sbjct: 388 NLAALRIG 395
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+NN + +A M+ + P+ T S L T + + G+ +H + + +++ D
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
NSL+SLYSKCG A IF + R+++S+++M+S FA N +G AL F M +
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEG 451
G PN+ F + AC+ V G
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVG 187
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 209/583 (35%), Positives = 323/583 (55%), Gaps = 52/583 (8%)
Query: 33 MPMRNAVSYAAM--------ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+P+R S AA I+ R G A ++ M R D V NAL++ +
Sbjct: 2 LPLRRPASLAARRLLRDNQRISALARAGDVAAARRVFDAMTHR--DVVSWNALLTALWRA 59
Query: 85 GR--CEEAARIF-EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
GR A R+F EAM +DVV+W S++ G G + A F PE+NV W AM+
Sbjct: 60 GRHHLPAARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLA 119
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G +++ D LF M +
Sbjct: 120 GLVRLGRVVDAQRLFDEMP---------------------------------------ER 140
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+++ +++ R G ++ A +VF M R+ VSW ++ISG V NG EA LFE MP
Sbjct: 141 NVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGMFVEARELFEAMP 200
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
K+ V+ T MITG +G+++ + LF+ + KD ++W A+I+G+V+N EEA R
Sbjct: 201 EKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLHAL 260
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M R+ V+P+ TL +VL+A +A A L QG HA +K +ES +S N+L+++YSKCGN
Sbjct: 261 MFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGN 320
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
V ++ +F N+ ++IVS+N++I+ +AQ+G ++ + LF +M+ GL+P+ ITFLSVLSA
Sbjct: 321 VGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSA 380
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C HVG+V+ F M + Y I P EHYAC+VDIL RAG L +A I M +
Sbjct: 381 CGHVGMVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYIKHMPLKAEKN 440
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VWG+LLGA + H N+ L +LAA+ L++ + S+ PYV+LS++Y+ G N++R + K
Sbjct: 441 VWGSLLGACQIHGNVQLGELAAKMLVQSDSQSSGPYVILSNIYAAAGMWGQVNQIRGQMK 500
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
+ ++K PG SW + ++VH+F+ G S ++++I L+ IS
Sbjct: 501 ERGVKKQPGYSWTEIGNEVHMFVGGDASHPEMRKIISELRKIS 543
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 203/413 (49%), Gaps = 34/413 (8%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
+R A++NAM+ L+ + +A +F MP RN VSY M+ RRG A E++
Sbjct: 108 ERNVATWNAMLAGLVRLG-RVVDAQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFD 166
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
+MP R + V A+ISG ++ G EA +FEAM EK+VVA +M+ G+CK+G V AR
Sbjct: 167 SMPDR--NLVSWAAMISGCVENGMFVEARELFEAMPEKNVVACTAMITGHCKQGDVDSAR 224
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+FD + K+V++W AM+ GY+ E+ L M R G+ + TL + AC
Sbjct: 225 RLFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALA 284
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
R+G H + + + I N+++TMY + G + E+ VF + +D VSWN++I+
Sbjct: 285 LLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIA 344
Query: 243 GYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
Y +G+ ++ LF M D +++ ++++ G ++ S++LF++M K ++
Sbjct: 345 AYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAIS 404
Query: 299 -----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+ I+ Q E+A + M ++ + S+L A QI
Sbjct: 405 PRAEHYACIVDILSRAGQLEKASSYIKHM---PLKAEKNVWGSLLGA----------CQI 451
Query: 354 HAHV------VKMNMESDVSIQNSLV---SLYSKCGNVVDAYRIFTNIDERNI 397
H +V KM ++SD V ++Y+ G +I + ER +
Sbjct: 452 HGNVQLGELAAKMLVQSDSQSSGPYVILSNIYAAAGMWGQVNQIRGQMKERGV 504
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 183/385 (47%), Gaps = 59/385 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFY--EAE 58
+A R N I+AL + A +F M R+ VS+ A++T R G + A
Sbjct: 10 LAARRLLRDNQRISALARAG-DVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAAR 68
Query: 59 ELYVN-MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
L+ MP+R D V N++I+G L G + A+ F E++V W +M+ G + GR
Sbjct: 69 RLFDEAMPSR--DVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVRLGR 126
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
V++A+ +FD+MPE+NVV++T MVD + E ++F SM N ++ +
Sbjct: 127 VVDAQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDSMPD----RNLVSWAAMISG 182
Query: 178 C---GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
C G F RE + + +++ ++IT + + G +D A ++F + +D
Sbjct: 183 CVENGMFVEARELFEAMP-------EKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDV 235
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDF--- 265
+SWN++I+GYVHNG EEA RL M GK
Sbjct: 236 ISWNAMIAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAI 295
Query: 266 ---------VSWT-TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+S++ ++T +S GN+ +S +F + KD V+W II+ + + +Y++
Sbjct: 296 AIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKV 355
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSA 340
F EM + P+ +T SVLSA
Sbjct: 356 IALFHEMEVTGLIPDDITFLSVLSA 380
>gi|68611229|emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 199/587 (33%), Positives = 330/587 (56%), Gaps = 23/587 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M++R ++N M++ LI N + EA ++F MP+RN+VS+AA++TG+ R G EA EL
Sbjct: 60 MSERNVFTWNCMVSGLIRNRM-LAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEAREL 118
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ +P R + V NA++SGY + G + A +F+ M +D V+W +M+ GY K+ V E
Sbjct: 119 FNRIPDR--NVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVRE 176
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
ARE+FD MP A++ GY+++ LF M+ N ++ ++ R
Sbjct: 177 ARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQ----TRNPVSWNVMITGYAR 232
Query: 181 FFRYREGVQVHGLVSRFGFD----YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
G+ R FD D++ +I+ Y + G +D A KVF M RD V+
Sbjct: 233 -------AGSMGIAQRL-FDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVA 284
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
WN+++ G+V N +++A +LF MP +D +SW ++ G+ +G+++ + F P KD
Sbjct: 285 WNTMMDGFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSANAWFRRAPNKDA 344
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
++W +ISG+ + E A EM+R ++P+Q TLS V+S A+ +L G +H
Sbjct: 345 ISWNTLISGYKD----EGALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLW 400
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+K E D + +SL+S+YSKCG + +A ++F I +R+ V++N+MI+ +A +GL +EA
Sbjct: 401 AIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEA 460
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L +F M G P+ TFLS+LSAC H G + EG +F+SM+ +N+ P +HY+CMVD
Sbjct: 461 LKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVD 520
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+LGR+G + +A D + + W L +H + L ++ A+++++ P
Sbjct: 521 LLGRSGFIHQAYDFTRRIPSDHRTTAWETLFSVCNSHGEIQLGEIIARNVLKARPSDGGM 580
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
Y +LS++Y+ VR K + ++K GCSWI LK +V F
Sbjct: 581 YTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTF 627
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 141/313 (45%), Gaps = 66/313 (21%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN-------------- 247
D+ N+ I + R G + A +VF MS+R+ +WN ++SG + N
Sbjct: 33 DVFQSNTAINEHFRAGRVAAARRVFDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAMP 92
Query: 248 -----------------GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
G + EA LF R+P ++ VSW M++G++ G ++++ ELF+M
Sbjct: 93 VRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDM 152
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP +DDV+W +ISG++ + EA F M P +++LS +
Sbjct: 153 MPWRDDVSWLTMISGYIKRKHVREARELFDSM----PSPPTSVCNALLSGYVELGYMRAA 208
Query: 351 SQIHAHVVKMN---------------------------MESDVSIQNSLVSLYSKCGNVV 383
+ + N E DV + +++ Y + G+V
Sbjct: 209 EVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVD 268
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A+++F ++ R+ V++N+M+ GF +N ++AL LF +M D +QI++ ++L
Sbjct: 269 AAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDR----DQISWNAILQGYV 324
Query: 444 HVGLVEEGFIYFK 456
G ++ +F+
Sbjct: 325 QQGDMDSANAWFR 337
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 50/186 (26%)
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ M E++ TW ++SG + N EA + F M VR N ++ +++L+
Sbjct: 57 FDEMSERNVFTWNCMVSGLIRNRMLAEARKVFDAM---PVR-NSVSWAALLTG------- 105
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
Y++CG V +A +F I +RN+VS+N+M+SG+
Sbjct: 106 ----------------------------YARCGRVAEARELFNRIPDRNVVSWNAMVSGY 137
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
A+NG+ + A LF M + +++L+++S G ++ + + + L++ P
Sbjct: 138 ARNGMVKRARELFDMMPWR----DDVSWLTMIS-----GYIKRKHV--REARELFDSMPS 186
Query: 468 PEHYAC 473
P C
Sbjct: 187 PPTSVC 192
>gi|357451901|ref|XP_003596227.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355485275|gb|AES66478.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 402
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 170/316 (53%), Positives = 232/316 (73%), Gaps = 3/316 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +RT+A+YNAMI+ I N C++ +A+E+F + RN VSYAAMI G V+ F AE+L
Sbjct: 87 MPERTTATYNAMISGYIRNGCNVTKAYELFTSFHDRNEVSYAAMIMGLVKARKFDLAEKL 146
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFE--AMVEKDVVAWGSMVDGYCKKGRV 118
Y P +RD VCSNALI+GYLK+G EA R+FE + ++DVV+W ++V G C+ GR+
Sbjct: 147 YREAPHEFRDPVCSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRI 206
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA-FNSITLTILFEA 177
AR +FD+MPE+NVV+W+AM+DGYM+ FE+GF LFL MRR G+ NS T+TI+ +
Sbjct: 207 DNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKG 266
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
CG R +EG+Q+HGLVSR GF++ +L N+IITMY G+ D A KVFS M +D V+W
Sbjct: 267 CGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTW 326
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
NSLISGY++N E++ AY +FERMP KD +SWT MI GF++ G + K++ELF+ + EKDD
Sbjct: 327 NSLISGYIYNNEVDAAYEVFERMPEKDLISWTAMIRGFATDGRIGKAVELFDTLKEKDDF 386
Query: 298 TWTAIISGFVNNEQYE 313
WT +ISGFV+NE+YE
Sbjct: 387 VWTVLISGFVSNEEYE 402
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 182/365 (49%), Gaps = 51/365 (13%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N IS + G A IF M +K++V W +M+ Y + G++ AR++FD+MPE+
Sbjct: 34 NVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTA 93
Query: 135 AWTAMVDGYMKVDC-FEDGFDLFLSMR-RGGMAFNSITLTIL----FEACGRFFRYREGV 188
+ AM+ GY++ C ++LF S R +++ ++ + ++ F+ + YRE
Sbjct: 94 TYNAMISGYIRNGCNVTKAYELFTSFHDRNEVSYAAMIMGLVKARKFDLAEKL--YREAP 151
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM--MSKRDAVSWNSLISGYVH 246
D + N++I Y ++G M+EA +VF +SKRD VSW++++ G
Sbjct: 152 HEF---------RDPVCSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCR 202
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+G I+ A LF+RMP ++ VSW+ MI G+ KG
Sbjct: 203 DGRIDNARMLFDRMPERNVVSWSAMIDGYMEKG--------------------------- 235
Query: 307 VNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+E F F++M R+ V N T++ ++ + +G QIH V ++ E
Sbjct: 236 ----LFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEFG 291
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ N+++++YS G A ++F+ + +++V++NS+ISG+ N + A +F +M +
Sbjct: 292 SVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISGYIYNNEVDAAYEVFERMPE 351
Query: 426 EGLVP 430
+ L+
Sbjct: 352 KDLIS 356
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 137/247 (55%), Gaps = 6/247 (2%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
N I+ GR G ++ A +F+ MS+++ V+W ++++ Y NG+I A +LF+ MP +
Sbjct: 34 NVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTA 93
Query: 267 SWTTMITGFSSKG-NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
++ MI+G+ G N+ K+ ELF ++++V++ A+I G V +++ A + + E +
Sbjct: 94 TYNAMISGYIRNGCNVTKAYELFTSFHDRNEVSYAAMIMGLVKARKFDLAEKLYREAPHE 153
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
P + +++++ +N+ ++ +V + DV +++V + G + +A
Sbjct: 154 FRDP--VCSNALINGYLKIGEMNEALRVFENVGVS--KRDVVSWSAVVGGLCRDGRIDNA 209
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP-NQITFLSVLSACNH 444
+F + ERN+VS+++MI G+ + GL E LF M+ EG+V N T ++ C +
Sbjct: 210 RMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGN 269
Query: 445 VGLVEEG 451
G V+EG
Sbjct: 270 CGRVKEG 276
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 213/656 (32%), Positives = 351/656 (53%), Gaps = 50/656 (7%)
Query: 4 RTSASYNAMITALIN--NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
++S+S + +L+N C + EA +F + ++ VS+ +I G+ + G + +
Sbjct: 34 KSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVM 93
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRC---EEAARIFEAMVEK-----DVVAWGSMVDGY 112
+ R ++ + +G R+ A+ K DV S+++ Y
Sbjct: 94 ELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMY 153
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
CK G EAR++FD MPE+N V+W M+ GY + LF MRR N T
Sbjct: 154 CKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFT 213
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ A G Q+H + + G + +GN+++TMY + G +D+A + F S +
Sbjct: 214 SVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDK 273
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM------PGK-DFV-----------SW------ 268
++++W+++I+GY +G+ ++A +LF M P + FV +W
Sbjct: 274 NSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVH 333
Query: 269 ---------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
T ++ ++ ++ + + F+ + E D V WT++I G+V N + E
Sbjct: 334 DYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENE 393
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+A + M + + PN+LT++SVL A ++ A L QG QIHA VK +V I ++L
Sbjct: 394 DALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALS 453
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
++Y+KCG + D +F + R+++S+N+MISG +QNG G+EAL LF +M+ EG P+ +
Sbjct: 454 TMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYV 513
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
TF+++LSAC+H+GLVE G+ YF+ M + ++P EHYACMVDIL RAG L EAI+ S
Sbjct: 514 TFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTES 573
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
T + +W +LGA R + N +L A + LMEL ++ YV+LS +YS +G+ D
Sbjct: 574 ATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDV 633
Query: 554 NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
RVR KL+ + K PGCSWI LK VH+F+ + + +I V L+ +SK K+
Sbjct: 634 ERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKD 689
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P+ + + L +L +G +HA ++K + S V I NSLV+LY+KC + +A +
Sbjct: 4 PSNRSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFV 62
Query: 389 FTNIDERNIVSYNSMISGFAQNGL--GEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
F I +++VS+N +I+G++Q+G + LF++M+ E PN TF V +A +
Sbjct: 63 FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAS 119
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 206/633 (32%), Positives = 340/633 (53%), Gaps = 61/633 (9%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR----DSVCS 74
+A E+F TMP R+ +S+ A+I G+ RR EA LY M P R S C+
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG----YCKKGRVIEAREIFDKMPE 130
N+ S Y + I E ++ + + G + + Y + G ++EA+ +F+
Sbjct: 443 NS--SAY------ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQA 494
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
++V++W +M+ G+ + +E + LF M+ + ++IT + C G Q+
Sbjct: 495 RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQI 554
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG ++ G D+ LGN++I MY R G + +A VF + RD +SW ++I G GE
Sbjct: 555 HGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGED 614
Query: 251 EEAYRLFERMP--------------------------GKDFVSW-------------TTM 271
+A LF +M GK +++ +
Sbjct: 615 MKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNAL 674
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
I+ +S G++ + E+F+ MP +D V+W II+G+ N + A + +M +DV PN+
Sbjct: 675 ISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNK 734
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ S+L+A ++ + L +G ++HA +VK ++ DV + +L+S+Y+KCG+ +A +F N
Sbjct: 735 FSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDN 794
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
I E+N+V++N+MI+ +AQ+GL +AL F M+ EG+ P+ TF S+LSACNH GLV EG
Sbjct: 795 IIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEG 854
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
+ F SM++ Y + P EHY C+V +LGRA EA LIN M F P VW LLGA R
Sbjct: 855 YQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACR 914
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
H N+ LA+ AA + ++L + Y++LS++Y+ G+ D ++R + + IRK PG
Sbjct: 915 IHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGR 974
Query: 572 SWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
SWI + + +H F+A +S + EI L+ +S
Sbjct: 975 SWIEVDNIIHEFIAADRSHPETAEIYAELKRLS 1007
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 270/539 (50%), Gaps = 59/539 (10%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCS 74
S+ +A ++F MP R+ +S+ ++I+ + ++G +A +L+ M P + S+ +
Sbjct: 77 SVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILT 136
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
L+ G+ + ++I +A ++D S++ Y K G + AR++F + ++VV
Sbjct: 137 ACYSPAELENGK-KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVV 195
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
++ M+ Y + ++ LF M G++ + +T L +A EG ++H L
Sbjct: 196 SYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLT 255
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
G + DI +G +++TM R G +D A + F + RD V +N+LI+ +G EA+
Sbjct: 256 VEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAF 315
Query: 255 RLFERM--------------------------PGK-------------DFVSWTTMITGF 275
+ RM GK D +I+ +
Sbjct: 316 EQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMY 375
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ G+L K+ ELF MP++D ++W AII+G+ E EA R + +M + V+P ++T
Sbjct: 376 ARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFL 435
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+LSA A ++ G IH +++ ++S+ + N+L+++Y +CG++++A +F R
Sbjct: 436 HLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE-----E 450
+++S+NSMI+G AQ+G E A LF++M++E L P+ ITF SVLS C + +E
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH 555
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G I ++ N+ ++++ R GSL +A ++ +S+ W A++G
Sbjct: 556 GRITESGLQLDVNLGNA------LINMYIRCGSLQDARNVFHSLQHRDVMS-WTAMIGG 607
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 137/547 (25%), Positives = 256/547 (46%), Gaps = 78/547 (14%)
Query: 39 VSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLKVGRCEEAARIFEA 96
+Y A++ R+ + EA+ ++ M W D SN LI+ Y+K +A ++F+
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 97 MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF 156
M +DV++W S++ Y ++G F K F LF
Sbjct: 88 MPRRDVISWNSLISCYAQQG--------FKK-----------------------KAFQLF 116
Query: 157 LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
M+ G N IT + AC G ++H + + G+ D + NS+++MYG+
Sbjct: 117 EEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKC 176
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMI 272
G + A +VF+ +S RD VS+N+++ Y ++E LF +M + D V++ ++
Sbjct: 177 GDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL 236
Query: 273 TGFSSK-----------------------------------GNLEKSIELFNMMPEKDDV 297
F++ G+++ + + F ++D V
Sbjct: 237 DAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVV 296
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+ A+I+ + EAF + M V N+ T S+L+A + + L G IH+H+
Sbjct: 297 VYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHI 356
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+ SDV I N+L+S+Y++CG++ A +F + +R+++S+N++I+G+A+ EA+
Sbjct: 357 SEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAM 416
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVD 476
L+++M+ EG+ P ++TFL +LSAC + +G I+ +++ I+ +++
Sbjct: 417 RLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS--GIKSNGHLANALMN 474
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM--ELEPDSA 534
+ R GSL EA ++ W +++ H + + A Q + ELEPD+
Sbjct: 475 MYRRCGSLMEAQNVFEGTQARDVIS-WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNI 533
Query: 535 TPYVVLS 541
T VLS
Sbjct: 534 TFASVLS 540
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 130/236 (55%), Gaps = 4/236 (1%)
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGF 275
D +N ++ + ++ +L+ + EA R+ +M G D +I +
Sbjct: 13 DVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMY 72
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
++ + ++F MP +D ++W ++IS + ++AF+ F EM PN++T
Sbjct: 73 VKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYI 132
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L+A + A L G +IH+ ++K + D +QNSL+S+Y KCG++ A ++F I R
Sbjct: 133 SILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR 192
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++VSYN+M+ +AQ +E L LF +M EG+ P+++T++++L A +++EG
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 19/296 (6%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
NA+I I S+ +A +F ++ R+ +S+ AMI G +G +A EL+ M
Sbjct: 571 NALINMYIRCG-SLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGF 629
Query: 65 -PARWRDS----VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
P + S VC++ S L G+ + A I + E D +++ Y K G +
Sbjct: 630 RPVKSTFSSILKVCTS---SACLDEGK-KVIAYILNSGYELDTGVGNALISAYSKSGSMT 685
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+ARE+FDKMP +++V+W ++ GY + + + M+ + N + L AC
Sbjct: 686 DAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACS 745
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F EG +VH + + D+ +G ++I+MY + G EA +VF + +++ V+WN+
Sbjct: 746 SFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNA 805
Query: 240 LISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
+I+ Y +G +A F M + D ++T++++ + G + + ++F+ M
Sbjct: 806 MINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSM 861
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%), Gaps = 13/251 (5%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA+I+A + + S+ +A E+F MP R+ VS+ +I G+ + G+ A E M + +
Sbjct: 672 NALISAY-SKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQM--QEQ 728
Query: 70 DSVCSN----ALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEA 121
D V + +L++ EE R+ +V++ DV +++ Y K G EA
Sbjct: 729 DVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEA 788
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
+E+FD + EKNVV W AM++ Y + F M + G+ + T T + AC
Sbjct: 789 QEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHA 848
Query: 182 FRYREGVQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNS 239
EG Q+ + S +G I ++ + GR EA + + M DA W +
Sbjct: 849 GLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWET 908
Query: 240 LISGYVHNGEI 250
L+ +G I
Sbjct: 909 LLGACRIHGNI 919
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 193/543 (35%), Positives = 301/543 (55%), Gaps = 40/543 (7%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMA 165
++++ YCK G + +A+ +FD+MP +N V+W AMV GY C ++ F+LF M +
Sbjct: 158 ALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLH 217
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
N T + A GVQVHGLV + G + + NS++TMY + G MD A V
Sbjct: 218 KNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHV 277
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG----------- 274
F +R++++W+++I+GY NG E A R+F +M F + G
Sbjct: 278 FESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTL 337
Query: 275 ----------------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
++ G + + E FN E D V WTA+++G
Sbjct: 338 MEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGH 397
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
V N ++E+A + M ++ V PN LT++S+L A A A L G Q+H ++K
Sbjct: 398 VQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGA 457
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
S+ ++L ++YSKCGN+ D +F + R+++++NS+ISGF+QNG G +A+NLF +MK E
Sbjct: 458 SVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLE 517
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G P+ +TF++VL AC+H+GLV+ G+ YF+SM Y + P +HYACMVDIL RAG L+E
Sbjct: 518 GTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSE 577
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A D I S+T + +W +LGA R+ + D+ A + LM+L + Y++LS++Y+
Sbjct: 578 AKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYILLSNIYAA 637
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKG 606
K D RVR KL + K PGCSW+ L +VH+F+ G + D + I L+ + K
Sbjct: 638 QRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHPDAEIINTELRRLGKH 697
Query: 607 TKE 609
K+
Sbjct: 698 MKD 700
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 212/639 (33%), Positives = 339/639 (53%), Gaps = 80/639 (12%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+A ++F M RN S+ A++ + G EA L+ MP R D NA++SG+ +
Sbjct: 72 DARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPER--DQCSWNAMVSGFAQR 129
Query: 85 GRCEEAARIFEAMVEKDVV----AWGS--------------------------------- 107
R EEA R M +D V ++GS
Sbjct: 130 DRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMG 189
Query: 108 --MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+VD Y K V A+ FD M +N+V+W +++ Y + ++F+ M G+
Sbjct: 190 SALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIE 249
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMDEANK 224
+ ITL + AC REG+Q+H V + + D++LGN+++ MY +
Sbjct: 250 PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCR------- 302
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKS 284
+ EA +F+RMP +D VS T+M++G++ +++ +
Sbjct: 303 ------------------------RVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAA 338
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+F+ M E++ V+W A+I+G+ N + EEA R F+ + R+ + P T ++L+A A
Sbjct: 339 RLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANL 398
Query: 345 ATLNQGSQIHAHVVKMNM------ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A L G Q H H++K +SD+ + NSL+ +Y KCG V D +F + ER+ V
Sbjct: 399 ADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNV 458
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N+MI G+AQNG G EAL +FR+M G P+ +T + VLSAC+H GLVEEG YF+SM
Sbjct: 459 SWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSM 518
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+ + P +HY CMVD+LGRAG L EA +LI +M EP VWG+LL A + H N+ L
Sbjct: 519 TIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITL 578
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
K A+ L+E++P ++ PYV+LS++Y+ +G+ +D RVR + + + K PGCSWI ++
Sbjct: 579 GKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQS 638
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHD 616
+H+F+ K K+I + L+ +++ K + P+ D
Sbjct: 639 HLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEAD 677
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 157/300 (52%), Gaps = 33/300 (11%)
Query: 162 GGMAF-NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G ++F +S L + C + E VH + + F +I + N ++ +YG+ GF+
Sbjct: 12 GDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFL- 70
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
E+A ++F+ M ++ SW ++ + G
Sbjct: 71 ------------------------------EDARKVFDHMQQRNTFSWNAVLGALTKFGA 100
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
L++++ LF MPE+D +W A++SGF +++EEA R+ ++M +D N+ + S LSA
Sbjct: 101 LDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSA 160
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A L+ G QIH + K DV + ++LV +YSKC V A R F ++D RNIVS+
Sbjct: 161 CAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSW 220
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMK 459
NS+I+ + QNG +AL +F +M + G+ P++IT SV SAC + + EG I+ + MK
Sbjct: 221 NSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMK 280
>gi|449433223|ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
gi|449487596|ref|XP_004157705.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 675
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 326/593 (54%), Gaps = 47/593 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R SYN +I L+ + A +IF MP R+ VS+ +MI G +R G+ EA +L
Sbjct: 103 MPERDVFSYNTVIGGLMQCG-DVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQL 161
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP + + + N +I G + G+ + A F M +D+V+W M+ G C+ GR+ E
Sbjct: 162 FDGMPLK--NVISWNLIIGGLVNCGKLDSAGEYFGKMSRRDLVSWTIMISGLCRAGRLDE 219
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACG 179
AR +F+ MP K+ W AM+ GY++ E +LF M R ++N +
Sbjct: 220 ARGLFNNMPTKDARVWNAMMVGYIENGKIEMAEELFGIMPERNFGSWNKL---------- 269
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
V+G V +D+A K+F M + +WN+
Sbjct: 270 ----------VNGFVGS--------------------QRVDDARKLFMEMPDKCQKTWNN 299
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
++ Y+ NG + + + L E++P + SWT +I G+ G + ++E+F M KD W
Sbjct: 300 IVLAYIRNGLVLQTHALLEKIPYGNIASWTNLIVGYFGIGEVGMAVEIFESMQYKDTTVW 359
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
A I G N++ EE + F M+R ++ T +S+L+ + TL G Q HA ++K
Sbjct: 360 NATIFGLGENDKGEEGLKLFTRMIRLGPCLDKATFTSILTICSDLETLQLGRQTHALILK 419
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
V++ N+++++Y++CGN+ A+ F+++ +R+++S+NSMI GFA +G GE+AL +
Sbjct: 420 EGFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVISWNSMICGFAHHGNGEDALEM 479
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F KM+ + PN ITF+ VLSAC+H GL+++G YF MK ++ P EHY C+VD+ G
Sbjct: 480 FEKMRLANIEPNHITFIGVLSACSHKGLIDKGRYYFNFMKNECSLRPLIEHYTCLVDLFG 539
Query: 480 RAGSLAEAIDLINSMT---FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
R G + EA+ + M E PP VWGALLGA R H N D+ +A + ++E EP +A
Sbjct: 540 RFGLIDEALSFLAEMKAEEIEVPPSVWGALLGACRIHKNYDVGVIAGEKVLEKEPHNAGV 599
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
Y++L+++Y GK+ + ++ + K ++K PGCSWI + + ++FL+G S
Sbjct: 600 YLILAEMYLRNGKRENAEKIFARMKNNGVKKQPGCSWIEVNNCGYVFLSGDCS 652
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 244/510 (47%), Gaps = 75/510 (14%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA 104
I+ +R G+ +A++L+ MP R+ V NA+I GY GRC + +F M E+DV +
Sbjct: 53 ISNCMRNGLVEQAQKLFDGMPQ--RNIVTWNAMIRGYFLNGRCSDGISLFRRMPERDVFS 110
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM 164
+ +++ G + G V A++IFD MP ++VV+W +M+ G ++ E+ LF
Sbjct: 111 YNTVIGGLMQCGDVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLF-------- 162
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
+G+ + ++S +++I+G + G +D A +
Sbjct: 163 ---------------------DGMPLKNVIS-----WNLIIGGLV-----NCGKLDSAGE 191
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKS 284
F MS+RD VSW +ISG G ++EA LF MP KD W M+ G+ G +E +
Sbjct: 192 YFGKMSRRDLVSWTIMISGLCRAGRLDEARGLFNNMPTKDARVWNAMMVGYIENGKIEMA 251
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
ELF +MPE++ +W +++GFV +++ ++A + F+EM K Q T ++++ A
Sbjct: 252 EELFGIMPERNFGSWNKLVNGFVGSQRVDDARKLFMEMPDK----CQKTWNNIVLAYIRN 307
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+ Q HA + K+ + S N +V Y G V A IF ++ ++ +N+ I
Sbjct: 308 GLV---LQTHALLEKIPYGNIASWTNLIVG-YFGIGEVGMAVEIFESMQYKDTTVWNATI 363
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----------HVGLVEEGFI 453
G +N GEE L LF +M G ++ TF S+L+ C+ H +++EGF
Sbjct: 364 FGLGENDKGEEGLKLFTRMIRLGPCLDKATFTSILTICSDLETLQLGRQTHALILKEGFN 423
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
F ++ M+++ R G++ A +SM+ + W +++ H
Sbjct: 424 GFVAVSN------------AMINMYARCGNMDCAFMEFSSMS-DRDVISWNSMICGFAHH 470
Query: 514 LNLD--LAKLAAQHLMELEPDSATPYVVLS 541
N + L L +EP+ T VLS
Sbjct: 471 GNGEDALEMFEKMRLANIEPNHITFIGVLS 500
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 41/257 (15%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++ L NS I+ R G +++A K+F M +R+ V+WN++I GY NG + LF RMP
Sbjct: 45 NLKLLNSEISNCMRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRMP 104
Query: 262 G-------------------------------KDFVSWTTMITGFSSKGNLEKSIELFNM 290
+D VSW +MI G G LE++I+LF+
Sbjct: 105 ERDVFSYNTVIGGLMQCGDVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDG 164
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP K+ ++W II G VN + + A +F +M R+D+ + +S + A G
Sbjct: 165 MPLKNVISWNLIIGGLVNCGKLDSAGEYFGKMSRRDLVSWTIMISGLCRA---------G 215
Query: 351 SQIHAHVVKMNMES-DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
A + NM + D + N+++ Y + G + A +F + ERN S+N +++GF
Sbjct: 216 RLDEARGLFNNMPTKDARVWNAMMVGYIENGKIEMAEELFGIMPERNFGSWNKLVNGFVG 275
Query: 410 NGLGEEALNLFRKMKDE 426
+ ++A LF +M D+
Sbjct: 276 SQRVDDARKLFMEMPDK 292
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
++ + NS +S + G V A ++F + +RNIV++N+MI G+ NG + ++LFR+M
Sbjct: 45 NLKLLNSEISNCMRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRMP 104
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE--HYACMVDILGRAG 482
+ + ++ +V+ G V+ K ++++ P + + M+ R G
Sbjct: 105 ERDV----FSYNTVIGGLMQCGDVD-------GAKDIFDLMPFRDVVSWNSMIAGCIRNG 153
Query: 483 SLAEAIDLINSMTFE 497
L EAI L + M +
Sbjct: 154 LLEEAIQLFDGMPLK 168
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 207/614 (33%), Positives = 331/614 (53%), Gaps = 47/614 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ +A F MP RN VS+ A I G V+ + EL++ M R V + S +
Sbjct: 199 SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEM-QRLGLGVSQPSYASAF 257
Query: 82 LKVG--RCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
C R A K D V ++VD Y K + +AR F +P V
Sbjct: 258 RSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE 317
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
AM+ G ++ + LF M R + F+ ++L+ +F AC Y +G QVH L
Sbjct: 318 TSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 377
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ GFD DI + N+++ +YG+ + EA +F M ++D+VSWN++I+ NG ++
Sbjct: 378 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 437
Query: 255 RLFERM------P---------------------------------GKDFVSWTTMITGF 275
F M P G D +T++ +
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY 497
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
G ++++ +L + + + V+W AI+SGF N++ EEA ++F EML ++P+ T +
Sbjct: 498 CKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFA 557
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VL A AT+ G QIH ++K M D I ++LV +Y+KCG++ D+ +F +++R
Sbjct: 558 TVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKR 617
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ VS+N+MI G+A +GLG EAL +F +M+ E +VPN TF++VL AC+HVGL ++G YF
Sbjct: 618 DFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYF 677
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
M T Y +EP EH+ACMVDILGR+ EA+ INSM F+ +W LL + +
Sbjct: 678 HLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQD 737
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+++A+LAA +++ L+PD ++ Y++LS++Y+ GK D +R R K R++K PGCSWI
Sbjct: 738 VEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIE 797
Query: 576 LKDKVHLFLAGRKS 589
++ ++H FL G K+
Sbjct: 798 VQSEMHGFLVGDKA 811
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 242/500 (48%), Gaps = 54/500 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N M+TA ++ I A +F MP + VS+ A+++G+ +RGMF E+ +L
Sbjct: 78 MPRRDTVSWNTMLTAY-SHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDL 136
Query: 61 YVNM------PARWRDSV----CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
+V M P R +V CS AL L V + A + +E DV ++VD
Sbjct: 137 FVEMARRGVSPDRTTFAVLLKSCS-ALEELSLGV---QVHALAVKTGLEIDVRTGSALVD 192
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K + +A F MPE+N V+W A + G ++ + + G +LF+ M+R G+ + +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
F +C G Q+H + F D ++G +I+ +Y + + +A + F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFS-SKG------ 279
+ N+++ G V G EA LF+ M D VS + + + + +KG
Sbjct: 313 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 372
Query: 280 ----------------------------NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
L ++ +F M +KD V+W AII+ N
Sbjct: 373 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGH 432
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
Y++ F EMLR ++P+ T SVL A AA +L G +H V+K + SD + ++
Sbjct: 433 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST 492
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+V +Y KCG + +A ++ I + +VS+N+++SGF+ N EEA F +M D GL P+
Sbjct: 493 VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552
Query: 432 QITFLSVLSACNHVGLVEEG 451
TF +VL C ++ +E G
Sbjct: 553 HFTFATVLDTCANLATIELG 572
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 147/534 (27%), Positives = 257/534 (48%), Gaps = 53/534 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN L+ Y + A R+F+AM +D V+W +M+ Y G + A +FD MP+ +V
Sbjct: 55 SNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDV 114
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W A+V GY + F++ DLF+ M R G++ + T +L ++C GVQVH L
Sbjct: 115 VSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHAL 174
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G + D+ G++++ MYG+ +D+A F M +R+ VSW + I+G V N +
Sbjct: 175 AVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRG 234
Query: 254 YRLFERMP---------------------------------------GKDFVSWTTMITG 274
LF M D V T ++
Sbjct: 235 LELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDV 294
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ +L + F +P T A++ G V EA F M+R +R + ++L
Sbjct: 295 YAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 354
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S V SA A T QG Q+H +K + D+ + N+++ LY KC +++AY IF + +
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-I 453
++ VS+N++I+ QNG ++ + F +M G+ P+ T+ SVL AC + +E G +
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474
Query: 454 YFKSMKTLYNIEPGPEHY--ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAG 510
+ K +K+ G + + + +VD+ + G + EA L + + + W A+L G
Sbjct: 475 HDKVIKSGL----GSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVS-WNAILSGFS 529
Query: 511 RTHLNLDLAKLAAQHL-MELEPDSATPYVVL---SDLYSV-IGKKRDGNRVRMK 559
+ + K ++ L M L+PD T VL ++L ++ +GK+ G ++ +
Sbjct: 530 LNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQE 583
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 71/152 (46%), Gaps = 32/152 (21%)
Query: 368 IQNSLVSL-------------------------------YSKCGNVVDAYRIFTNIDERN 396
+ N L+ + YS G++ A +F + + +
Sbjct: 54 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 113
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+VS+N+++SG+ Q G+ +E+++LF +M G+ P++ TF +L +C+ + + G +
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG-VQVH 172
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
++ +E + +VD+ G+ SL +A+
Sbjct: 173 ALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 336/620 (54%), Gaps = 57/620 (9%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGYLKVGRCEE 89
RNAVS+ M++ FV+ +A EL+ M P + S NA R E
Sbjct: 165 RNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGS-----RDLE 219
Query: 90 AARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
A R AMV +KDV ++VD Y K G + A +F K+P+ +VV+W A + G +
Sbjct: 220 AGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCV 279
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV--QVHGLVSRFGFDYD 202
+ +L L M+ G+ N TL+ + +AC + Q+HG + + D D
Sbjct: 280 LHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSD 339
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-- 260
+G +++ MY + G +D+A KVF + ++D + WN+LISG H G E+ LF RM
Sbjct: 340 DYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRK 399
Query: 261 PGKDF-----------------VSWTTMITGFSSK--------------------GNLEK 283
G D +S TT + + K L
Sbjct: 400 EGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRY 459
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ ++F + + +T++I+ + E+A + F+EMLRK + P+ LSS+L+A A+
Sbjct: 460 ANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACAS 519
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+ QG Q+HAH++K +DV N+LV Y+KCG++ DA F+ + ++ +VS+++M
Sbjct: 520 LSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAM 579
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I G AQ+G G+ AL++FR+M DE + PN IT SVL ACNH GLV+E YF SMK ++
Sbjct: 580 IGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFG 639
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
I+ EHY+CM+D+LGRAG L +A++L+NSM FE VWGALL A R H + +L KLAA
Sbjct: 640 IDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAA 699
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ L LEP+ + +V+L++ Y+ G + +VR K +++K P SW+ LKD+VH F
Sbjct: 700 EKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTF 759
Query: 584 LAGRKSCLDLKEIEVTLQTI 603
+ G KS ++I L+ +
Sbjct: 760 IVGDKSHPRARDIYAKLEEL 779
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/540 (26%), Positives = 240/540 (44%), Gaps = 61/540 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F P VS+++++T + + EA + M R R C+ + LK
Sbjct: 56 ARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAM--RARGVRCNEFALPIVLKCA 113
Query: 86 R-----CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAWTAM 139
+ A + D+ ++V Y G V EAR +FD+ ++N V+W M
Sbjct: 114 PDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGM 173
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ ++K D D +LF M G+ N + + AC G +VH +V R G+
Sbjct: 174 MSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGY 233
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D D+ N+++ MY +LG + A VF + K D VSWN+ ISG V +G + A L +
Sbjct: 234 DKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQ 293
Query: 260 MPGKDFV---------------------SWTTMITGFSSK-------------------- 278
M V + I GF K
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKY 353
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G L+ + ++F +P KD + W A+ISG + + E+ F M ++ N+ TL++VL
Sbjct: 354 GLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVL 413
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
++A+ ++ +Q+HA K+ SD + N L+ Y KC + A ++F NI+
Sbjct: 414 KSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNII 473
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---FIYF 455
++ SMI+ +Q GE+A+ LF +M +GL P+ S+L+AC + E+G +
Sbjct: 474 AFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHL 533
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTH 513
K + ++ G +V + GS+ +A DL + + P GV W A++G H
Sbjct: 534 IKRKFMTDVFAGNA----LVYTYAKCGSIEDA-DL--AFSGLPDKGVVSWSAMIGGLAQH 586
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
++S +L+ AAT +L G+ IHAH++K + + +N L+S YSKC A R+F
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDET 63
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+ VS++S+++ ++ N L EAL FR M+ G+ N+ VL GL
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL 118
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 207/614 (33%), Positives = 331/614 (53%), Gaps = 47/614 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ +A F MP RN VS+ A I G V+ + EL++ M R V + S +
Sbjct: 199 SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEM-QRLGLGVSQPSYASAF 257
Query: 82 LKVG--RCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
C R A K D V ++VD Y K + +AR F +P V
Sbjct: 258 RSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE 317
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
AM+ G ++ + LF M R + F+ ++L+ +F AC Y +G QVH L
Sbjct: 318 TSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 377
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ GFD DI + N+++ +YG+ + EA +F M ++D+VSWN++I+ NG ++
Sbjct: 378 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 437
Query: 255 RLFERM------P---------------------------------GKDFVSWTTMITGF 275
F M P G D +T++ +
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY 497
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
G ++++ +L + + + V+W AI+SGF N++ EEA ++F EML ++P+ T +
Sbjct: 498 CKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFA 557
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VL A AT+ G QIH ++K M D I ++LV +Y+KCG++ D+ +F +++R
Sbjct: 558 TVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKR 617
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ VS+N+MI G+A +GLG EAL +F +M+ E +VPN TF++VL AC+HVGL ++G YF
Sbjct: 618 DFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYF 677
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
M T Y +EP EH+ACMVDILGR+ EA+ INSM F+ +W LL + +
Sbjct: 678 HLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQD 737
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+++A+LAA +++ L+PD ++ Y++LS++Y+ GK D +R R K R++K PGCSWI
Sbjct: 738 VEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIE 797
Query: 576 LKDKVHLFLAGRKS 589
++ ++H FL G K+
Sbjct: 798 VQSEMHGFLVGDKA 811
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 242/500 (48%), Gaps = 54/500 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N M+TA ++ I A +F MP + VS+ A+++G+ +RGMF E+ +L
Sbjct: 78 MPRRDTVSWNTMLTAY-SHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDL 136
Query: 61 YVNM------PARWRDSV----CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
+V M P R +V CS AL L V + A + +E DV ++VD
Sbjct: 137 FVEMARRGVSPDRTTFAVLLKSCS-ALEELSLGV---QVHALAVKTGLEIDVRTGSALVD 192
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K + +A F MPE+N V+W A + G ++ + + G +LF+ M+R G+ + +
Sbjct: 193 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 252
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
F +C G Q+H + F D ++G +I+ +Y + + +A + F +
Sbjct: 253 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFS-SKG------ 279
+ N+++ G V G EA LF+ M D VS + + + + +KG
Sbjct: 313 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 372
Query: 280 ----------------------------NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
L ++ +F M +KD V+W AII+ N
Sbjct: 373 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGH 432
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
Y++ F EMLR ++P+ T SVL A AA +L G +H V+K + SD + ++
Sbjct: 433 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST 492
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+V +Y KCG + +A ++ I + +VS+N+++SGF+ N EEA F +M D GL P+
Sbjct: 493 VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552
Query: 432 QITFLSVLSACNHVGLVEEG 451
TF +VL C ++ +E G
Sbjct: 553 HFTFATVLDTCANLATIELG 572
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 147/534 (27%), Positives = 257/534 (48%), Gaps = 53/534 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN L+ Y + A R+F+AM +D V+W +M+ Y G + A +FD MP+ +V
Sbjct: 55 SNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDV 114
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W A+V GY + F++ DLF+ M R G++ + T +L ++C GVQVH L
Sbjct: 115 VSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHAL 174
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G + D+ G++++ MYG+ +D+A F M +R+ VSW + I+G V N +
Sbjct: 175 AVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRG 234
Query: 254 YRLFERMP---------------------------------------GKDFVSWTTMITG 274
LF M D V T ++
Sbjct: 235 LELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDV 294
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ +L + F +P T A++ G V EA F M+R +R + ++L
Sbjct: 295 YAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 354
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S V SA A T QG Q+H +K + D+ + N+++ LY KC +++AY IF + +
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-I 453
++ VS+N++I+ QNG ++ + F +M G+ P+ T+ SVL AC + +E G +
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474
Query: 454 YFKSMKTLYNIEPGPEHY--ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAG 510
+ K +K+ G + + + +VD+ + G + EA L + + + W A+L G
Sbjct: 475 HDKVIKSGL----GSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVS-WNAILSGFS 529
Query: 511 RTHLNLDLAKLAAQHL-MELEPDSATPYVVL---SDLYSV-IGKKRDGNRVRMK 559
+ + K ++ L M L+PD T VL ++L ++ +GK+ G ++ +
Sbjct: 530 LNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQE 583
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 34/195 (17%)
Query: 327 VRPNQLTLSSVLS--ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL--------- 375
V P ++T S V A A L G HA +V + + N L+ +
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAAC 70
Query: 376 ----------------------YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
YS G++ A +F + + ++VS+N+++SG+ Q G+
Sbjct: 71 ARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMF 130
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
+E+++LF +M G+ P++ TF +L +C+ + + G + ++ +E +
Sbjct: 131 QESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG-VQVHALAVKTGLEIDVRTGSA 189
Query: 474 MVDILGRAGSLAEAI 488
+VD+ G+ SL +A+
Sbjct: 190 LVDMYGKCRSLDDAL 204
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/611 (32%), Positives = 343/611 (56%), Gaps = 49/611 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--------PARWRDSVCSNAL 77
AF IF MP RN V ++A+I G+V+ F E +L+ +M + + S A
Sbjct: 192 AFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAG 251
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+S + K+G + ++ D + + +D Y K R+ +A ++F+ +P ++
Sbjct: 252 LSAF-KLGT-QLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYN 309
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
A++ GY + D ++F S++R ++F+ I+L+ AC + EG+Q+HGL +
Sbjct: 310 AIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKC 369
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G ++I + N+I+ MYG+ G + EA +F M +RDAVSWN++I+ + N EI + LF
Sbjct: 370 GLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLF 429
Query: 258 ERM------P---------------------------------GKDFVSWTTMITGFSSK 278
M P G D+ + ++ +
Sbjct: 430 VSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKC 489
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G L ++ ++ + + EK V+W +IISGF + +Q E A R+F +ML V P+ T ++VL
Sbjct: 490 GMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVL 549
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A AT+ G QIHA ++K+N+ SDV I ++LV +YSKCGN+ D+ +F +R+ V
Sbjct: 550 DVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYV 609
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++++MI +A +G GE+A+ LF +M+ + PN F+SVL AC H+G V++G YF+ M
Sbjct: 610 TWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIM 669
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
++ Y ++P EHY+CMVD+LGR+ + EA+ LI SM FE +W LL + N+++
Sbjct: 670 QSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEV 729
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
A+ A L++L+P ++ YV+L+++Y+ +G + ++R K +++K PGCSWI ++D
Sbjct: 730 AEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRD 789
Query: 579 KVHLFLAGRKS 589
+VH FL G K+
Sbjct: 790 EVHTFLVGDKA 800
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 159/570 (27%), Positives = 263/570 (46%), Gaps = 90/570 (15%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
AF++F MP R+ +S+ MI G+ G A+ L+ MP R D V N+L+S YL G
Sbjct: 60 AFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPER--DVVSWNSLLSCYLHNG 117
Query: 86 RCEEAARIFEAM---------------------------------------VEKDVVAWG 106
++ IF M E DVV
Sbjct: 118 VNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGS 177
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
++VD Y K ++ A IF +MPE+N+V W+A++ GY++ D F +G LF M + GM
Sbjct: 178 ALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGV 237
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T +F +C ++ G Q+HG + F YD I+G + + MY + M +A KVF
Sbjct: 238 SQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVF 297
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSS-KGNL 281
+ + S+N++I GY + +A +F+ + D +S + +T S KG+L
Sbjct: 298 NTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHL 357
Query: 282 E----------------------------------KSIELFNMMPEKDDVTWTAIISGFV 307
E ++ +F+ M +D V+W AII+
Sbjct: 358 EGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHE 417
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
NE+ + F+ MLR + P+ T SV+ A A LN G +IH +VK M D
Sbjct: 418 QNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWF 477
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ ++LV +Y KCG +++A +I ++E+ VS+NS+ISGF+ E A F +M + G
Sbjct: 478 VGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMG 537
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
++P+ T+ +VL C ++ +E G + L N+ + +VD+ + G++ ++
Sbjct: 538 VIPDNFTYATVLDVCANMATIELGKQIHAQILKL-NLHSDVYIASTLVDMYSKCGNMQDS 596
Query: 488 IDLINSMTFEPPPG----VWGALLGAGRTH 513
+ FE P W A++ A H
Sbjct: 597 -----RLMFEKTPKRDYVTWSAMICAYAYH 621
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 250/511 (48%), Gaps = 49/511 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+N L+ Y K A ++F+ M +DV++W +M+ GY + G + A+ +FD MPE++V
Sbjct: 44 ANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDV 103
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W +++ Y+ ++F+ MR + + T +++ +AC Y G+QVH L
Sbjct: 104 VSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCL 163
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ GF+ D++ G++++ MY + +D A ++F M +R+ V W+++I+GYV N E
Sbjct: 164 AIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEG 223
Query: 254 YRLFERM-------------------PGKDFVSWTTMITGFSSKGN-------------- 280
+LF+ M G T + G + K +
Sbjct: 224 LKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283
Query: 281 ------LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ + ++FN +P ++ AII G+ +Q +A F + R + ++++L
Sbjct: 284 YAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISL 343
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S L+A + +G Q+H VK + ++ + N+++ +Y KCG +V+A IF +++
Sbjct: 344 SGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMER 403
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-I 453
R+ VS+N++I+ QN + L+LF M + P+ T+ SV+ AC + G I
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEI 463
Query: 454 YFKSMKTLYNIE--PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
+ + +K+ ++ G + +VD+ G+ G L EA + I+ E W +++
Sbjct: 464 HGRIVKSGMGLDWFVG----SALVDMYGKCGMLMEA-EKIHDRLEEKTTVSWNSIISGFS 518
Query: 512 THLNLDLAKLAAQHLMELE--PDSATPYVVL 540
+ + A+ ++E+ PD+ T VL
Sbjct: 519 SQKQSENAQRYFSQMLEMGVIPDNFTYATVL 549
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ T S +L + LN G Q HA ++ + + + N LV Y K N+ A+++F
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ R+++S+N+MI G+A+ G A +LF M + +V ++ S+LS H G+ +
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVV----SWNSLLSCYLHNGVNRK 121
Query: 451 GFIYFKSMKTL 461
F M++L
Sbjct: 122 SIEIFVRMRSL 132
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 207/614 (33%), Positives = 331/614 (53%), Gaps = 47/614 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ +A F MP RN VS+ A I G V+ + EL++ M R V + S +
Sbjct: 241 SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEM-QRLGLGVSQPSYASAF 299
Query: 82 LKVG--RCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
C R A K D V ++VD Y K + +AR F +P V
Sbjct: 300 RSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE 359
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
AM+ G ++ + LF M R + F+ ++L+ +F AC Y +G QVH L
Sbjct: 360 TSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 419
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ GFD DI + N+++ +YG+ + EA +F M ++D+VSWN++I+ NG ++
Sbjct: 420 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 479
Query: 255 RLFERM------P---------------------------------GKDFVSWTTMITGF 275
F M P G D +T++ +
Sbjct: 480 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMY 539
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
G ++++ +L + + + V+W AI+SGF N++ EEA ++F EML ++P+ T +
Sbjct: 540 CKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFA 599
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VL A AT+ G QIH ++K M D I ++LV +Y+KCG++ D+ +F +++R
Sbjct: 600 TVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKR 659
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ VS+N+MI G+A +GLG EAL +F +M+ E +VPN TF++VL AC+HVGL ++G YF
Sbjct: 660 DFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYF 719
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
M T Y +EP EH+ACMVDILGR+ EA+ INSM F+ +W LL + +
Sbjct: 720 HLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQD 779
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+++A+LAA +++ L+PD ++ Y++LS++Y+ GK D +R R K R++K PGCSWI
Sbjct: 780 VEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIE 839
Query: 576 LKDKVHLFLAGRKS 589
++ ++H FL G K+
Sbjct: 840 VQSEMHGFLVGDKA 853
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 242/500 (48%), Gaps = 54/500 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N M+TA ++ I A +F MP + VS+ A+++G+ +RGMF E+ +L
Sbjct: 120 MPRRDTVSWNTMLTAY-SHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDL 178
Query: 61 YVNM------PARWRDSV----CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
+V M P R +V CS AL L V + A + +E DV ++VD
Sbjct: 179 FVEMARRGVSPDRTTFAVLLKSCS-ALEELSLGV---QVHALAVKTGLEIDVRTGSALVD 234
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K + +A F MPE+N V+W A + G ++ + + G +LF+ M+R G+ + +
Sbjct: 235 MYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPS 294
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
F +C G Q+H + F D ++G +I+ +Y + + +A + F +
Sbjct: 295 YASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 354
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFS-SKG------ 279
+ N+++ G V G EA LF+ M D VS + + + + +KG
Sbjct: 355 NHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ 414
Query: 280 ----------------------------NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
L ++ +F M +KD V+W AII+ N
Sbjct: 415 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGH 474
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
Y++ F EMLR ++P+ T SVL A AA +L G +H V+K + SD + ++
Sbjct: 475 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST 534
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+V +Y KCG + +A ++ I + +VS+N+++SGF+ N EEA F +M D GL P+
Sbjct: 535 VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 594
Query: 432 QITFLSVLSACNHVGLVEEG 451
TF +VL C ++ +E G
Sbjct: 595 HFTFATVLDTCANLATIELG 614
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 147/534 (27%), Positives = 257/534 (48%), Gaps = 53/534 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN L+ Y + A R+F+AM +D V+W +M+ Y G + A +FD MP+ +V
Sbjct: 97 SNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDV 156
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W A+V GY + F++ DLF+ M R G++ + T +L ++C GVQVH L
Sbjct: 157 VSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHAL 216
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G + D+ G++++ MYG+ +D+A F M +R+ VSW + I+G V N +
Sbjct: 217 AVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRG 276
Query: 254 YRLFERMP---------------------------------------GKDFVSWTTMITG 274
LF M D V T ++
Sbjct: 277 LELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDV 336
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ +L + F +P T A++ G V EA F M+R +R + ++L
Sbjct: 337 YAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSL 396
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S V SA A T QG Q+H +K + D+ + N+++ LY KC +++AY IF + +
Sbjct: 397 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 456
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-I 453
++ VS+N++I+ QNG ++ + F +M G+ P+ T+ SVL AC + +E G +
Sbjct: 457 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 516
Query: 454 YFKSMKTLYNIEPGPEHY--ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAG 510
+ K +K+ G + + + +VD+ + G + EA L + + + W A+L G
Sbjct: 517 HDKVIKSGL----GSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVS-WNAILSGFS 571
Query: 511 RTHLNLDLAKLAAQHL-MELEPDSATPYVVL---SDLYSV-IGKKRDGNRVRMK 559
+ + K ++ L M L+PD T VL ++L ++ +GK+ G ++ +
Sbjct: 572 LNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQE 625
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS---IQNSLVSL-------- 375
V P ++T S V S A A + A +M + V + N L+ +
Sbjct: 53 VAPARVTFSRVFQ-SCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAA 111
Query: 376 -----------------------YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
YS G++ A +F + + ++VS+N+++SG+ Q G+
Sbjct: 112 CARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGM 171
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
+E+++LF +M G+ P++ TF +L +C+ + + G + ++ +E +
Sbjct: 172 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG-VQVHALAVKTGLEIDVRTGS 230
Query: 473 CMVDILGRAGSLAEAI 488
+VD+ G+ SL +A+
Sbjct: 231 ALVDMYGKCRSLDDAL 246
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 338/634 (53%), Gaps = 71/634 (11%)
Query: 29 IFATMPMRNAVSYAAMITGFVR-------RGMFYE-----------AEELYVNMPARWRD 70
+F +P RN VS+ A+ + +V+ G+FYE + VN RD
Sbjct: 214 LFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRD 273
Query: 71 SVCSNALISGYL-KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
S +I GYL K+G + D + ++VD Y K G + +A +F+K+
Sbjct: 274 S-SRGKIIHGYLIKLG------------YDWDPFSANALVDMYAKVGDLADAISVFEKIK 320
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ ++V+W A++ G + + E +L M+R G+ N TL+ +AC G Q
Sbjct: 321 QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQ 380
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + + + D+ + ++ MY + +++A F+++ ++D ++WN++ISGY E
Sbjct: 381 LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWE 440
Query: 250 IEEAYRLFERM-------------------PGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
EA LF M G V + G S K I + N
Sbjct: 441 DMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNS 500
Query: 291 MPEK--------------------DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+ + D V++T++I+ + Q EEA + F+EM +++P+
Sbjct: 501 LIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPD 560
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ SS+L+A A + QG Q+H H++K D+ NSLV++Y+KCG++ DA R F+
Sbjct: 561 RFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFS 620
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ ER IVS+++MI G AQ+G G +AL LF +M EG+ PN IT +SVL ACNH GLV E
Sbjct: 621 ELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTE 680
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
+YF+SM+ L+ +P EHYACM+D+LGRAG + EA++L+N M FE VWGALLGA
Sbjct: 681 AKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAA 740
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H +++L + AA+ L LEP+ + +V+L+++Y+ GK + VR + +++K PG
Sbjct: 741 RIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPG 800
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
SWI +KDKV+ FL G +S +EI L +S
Sbjct: 801 MSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELS 834
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/526 (28%), Positives = 254/526 (48%), Gaps = 55/526 (10%)
Query: 37 NAVSYAAMITGFVRRGM-------FYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEE 89
+ VS++A+I+G+ + G+ F+E L V SV I L++G+
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVH 180
Query: 90 AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
+ E DV ++V Y K ++++ +FD++PE+NVV+W A+ Y+++D
Sbjct: 181 GVVVVSGF-EGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFC 239
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
+ LF M G+ N +L+ + AC G +HG + + G+D+D N++
Sbjct: 240 GEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANAL 299
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG- 262
+ MY ++G + +A VF + + D VSWN++I+G V + E+A L +M P
Sbjct: 300 VDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNI 359
Query: 263 --------------------------------KDFVSWTTMITGFSSKGNLEKSIELFNM 290
D ++ +S LE + FN+
Sbjct: 360 FTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNL 419
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+PEKD + W AIISG+ + EA F+EM ++ + NQ TLS++L ++A ++
Sbjct: 420 LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVC 479
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q+H VK SD+ + NSL+ Y KC +V DA RIF ++VS+ SMI+ +AQ
Sbjct: 480 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY 539
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---FIYFKSMKTLYNIEPG 467
G GEEAL LF +M+D L P++ S+L+AC ++ E+G ++ + +I G
Sbjct: 540 GQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAG 599
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+V++ + GS+ +A + +T E W A++G H
Sbjct: 600 NS----LVNMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIGGLAQH 640
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 206/449 (45%), Gaps = 78/449 (17%)
Query: 37 NAVSYAAMI-----TGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAA 91
+VSY+ ++ T +R G+ A ++ D N LI+ Y K A
Sbjct: 55 TSVSYSKLLSQCCTTKSLRPGLQIHA---HITKSGLSDDPSIRNHLINLYSKCRNFGYAR 111
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
++ + E D+V+W +++ GY + G + A++
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNG-----------------LGGGALM----------- 143
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
F M G+ N T + + +AC R G QVHG+V GF+ D+ + N+++
Sbjct: 144 ---AFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVV 200
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------- 260
MY + ++ ++F + +R+ VSWN+L S YV EA LF M
Sbjct: 201 MYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFS 260
Query: 261 ---------------PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMP 292
GK D S ++ ++ G+L +I +F +
Sbjct: 261 LSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK 320
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+ D V+W A+I+G V +E +E+A +M R + PN TLSS L A A G Q
Sbjct: 321 QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQ 380
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H+ ++KM+MESD+ + LV +YSKC + DA F + E++++++N++ISG++Q
Sbjct: 381 LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWE 440
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSA 441
EAL+LF +M EG+ NQ T ++L +
Sbjct: 441 DMEALSLFVEMHKEGIGFNQTTLSTILKS 469
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 41/331 (12%)
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+G S++ + L C R G+Q+H +++ G D + N +I +Y +
Sbjct: 49 KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFG 108
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------------------- 260
A K+ S+ D VSW++LISGY NG A F M
Sbjct: 109 YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
Query: 261 --------------------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
G FV+ T++ ++ S LF+ +PE++ V+W
Sbjct: 169 IVKDLRIGKQVHGVVVVSGFEGDVFVA-NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWN 227
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+ S +V + EA F EM+ ++PN+ +LSS+++A ++G IH +++K+
Sbjct: 228 ALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKL 287
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ D N+LV +Y+K G++ DA +F I + +IVS+N++I+G + E+AL L
Sbjct: 288 GYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELL 347
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+MK G+ PN T S L AC +GL E G
Sbjct: 348 GQMKRSGICPNIFTLSSALKACAGMGLKELG 378
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 4/244 (1%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I +S N + +L + E D V+W+A+ISG+ N A F EM V+ N
Sbjct: 97 LINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCN 156
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ T SSVL A + L G Q+H VV E DV + N+LV +Y+KC +D+ R+F
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
I ERN+VS+N++ S + Q EA+ LF +M G+ PN+ + S+++AC +
Sbjct: 217 EIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276
Query: 451 G-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G I+ +K Y+ +P + +VD+ + G LA+AI + + +P W A++
Sbjct: 277 GKIIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAG 333
Query: 510 GRTH 513
H
Sbjct: 334 CVLH 337
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 127/264 (48%), Gaps = 19/264 (7%)
Query: 12 MITALINN--NCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---- 64
++ +LI++ CS + +A IF + + VS+ +MIT + + G EA +L++ M
Sbjct: 497 VVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME 556
Query: 65 --PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRV 118
P R+ VCS +L++ + E+ ++ +++ D+ A S+V+ Y K G +
Sbjct: 557 LKPDRF---VCS-SLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSI 612
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+A F ++ E+ +V+W+AM+ G + LF M + G++ N ITL + AC
Sbjct: 613 DDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGAC 672
Query: 179 GRFFRYREG-VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVS 236
E + + FGF +I + GR G ++EA ++ + M + +A
Sbjct: 673 NHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASV 732
Query: 237 WNSLISGYVHNGEIEEAYRLFERM 260
W +L+ + ++E R E +
Sbjct: 733 WGALLGAARIHKDVELGRRAAEML 756
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 188/489 (38%), Positives = 295/489 (60%), Gaps = 1/489 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEACG 179
AR +FD++P + W M+ Y+ ++ LF MR + + +S +L+++ +ACG
Sbjct: 57 ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACG 116
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
R G ++H V + G D+ + ++I MY + G ++ A + M+ D V +N
Sbjct: 117 RLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNV 176
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
L++ YV GEI A+ LF+RMP +D VSW TMI G +S G++ + +LF+ E+D ++W
Sbjct: 177 LLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISW 236
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+++I+ + Q EA R F EM +V P+++T+ SVLSA L G IH + +
Sbjct: 237 SSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIER 296
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+E D+ + SLV +Y+KCG++ ++ R+F ++ R++ ++++MI G A +G GE AL+
Sbjct: 297 NRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDH 356
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F KM E + PN +TF+ VLSAC+H+GLV+EG+ YF SM +Y++ P EHY C+VDILG
Sbjct: 357 FSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILG 416
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L EA++LI SM F P VW ALLGA R + N+++A+ A +L+ELEP YV+
Sbjct: 417 RAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVL 476
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
LS++YS + VR K I+K PG S I + + VH F+AG +S + K+I
Sbjct: 477 LSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRM 536
Query: 600 LQTISKGTK 608
L I+ K
Sbjct: 537 LSEITARLK 545
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 149/316 (47%), Gaps = 45/316 (14%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V N L++ Y++VG A +F+ M E+D+V+W +M+ G+ G V A+++FD+
Sbjct: 170 DLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTC 229
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E+++++W++M+ Y K + LF M+ + + +T+ + ACG G
Sbjct: 230 ERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKM 289
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + R + D+ LG S++ MY + G +D + +VF+ M+ RD +W+++I G ++G
Sbjct: 290 IHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGF 349
Query: 250 IEEAYRLFERMPGKD-------FV--------------SWT------------------- 269
E A F +M +D F+ WT
Sbjct: 350 GELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYG 409
Query: 270 TMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISG---FVNNEQYEEAFRWFIEMLRK 325
++ G L++++EL MP D + W A++ + N E EEA +E L
Sbjct: 410 CVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLE-LEP 468
Query: 326 DVRPNQLTLSSVLSAS 341
V N + LS++ S +
Sbjct: 469 HVDGNYVLLSNIYSQA 484
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD---AYRIFTNID 393
V+S LNQ QIHA ++K +++ + + L+ C + D A +F I
Sbjct: 6 VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS-VLSAC 442
+ +N+MI + + +E+++LF +M+ + +P LS V+ AC
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQAC 115
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 215/628 (34%), Positives = 333/628 (53%), Gaps = 47/628 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ +A F M RN+VS+ A I G V+ + EL+V M R V A S +
Sbjct: 201 SLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQ-RLGLGVSQPAYASAF 259
Query: 82 LKVGR--CEEAARIFEAMVEKDV-----VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
C AR A K+V V ++VD Y K G +++AR F +P NV
Sbjct: 260 RSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVE 319
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
AM+ G ++ + LF M R G+ F+ I+L+ +F AC Y +G+QVH L
Sbjct: 320 TCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLA 379
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ GFD D+ + N+I+ +YG+ + EA VF M +RD+VSWN++I+ N E+
Sbjct: 380 VKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTI 439
Query: 255 RLFERM------P---------------------------------GKDFVSWTTMITGF 275
M P G D +T++ +
Sbjct: 440 AHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMY 499
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
G + ++ +L + + ++ V+W +IISGF +Q EEA R+F EML V+P+ T +
Sbjct: 500 CKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYA 559
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VL A AT+ G QIH ++K M D I ++LV +Y+KCGN+ D+ +F +
Sbjct: 560 TVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKL 619
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ VS+N+MI G+A +G G EAL +F +M+ +VPN TF++VL AC+HVGL+++G YF
Sbjct: 620 DFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYF 679
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
M + Y + P EH+ACMVDILGR+ EA++ I SM E VW LL + +
Sbjct: 680 HLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQD 739
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+++A+ AA +++ L+PD A+ Y++LS++Y+ GK D +R R + R+RK PGCSWI
Sbjct: 740 VEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIE 799
Query: 576 LKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
++ ++H FL G K KE+ L ++
Sbjct: 800 VQSEMHGFLVGDKVHPRSKEVYEMLNSL 827
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 221/457 (48%), Gaps = 42/457 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN L+ Y + G A +F+ M +D V+W +M+ Y G A +F MP+ +V
Sbjct: 57 SNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDV 116
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W ++ GY + F + L + M R G+A + TL +L ++CG GVQ+H L
Sbjct: 117 VSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHAL 176
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G + D+ G++++ MYG+ +D+A + F M +R++VSW + I+G V N +
Sbjct: 177 AVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRG 236
Query: 254 YRLFERMP---------------------------------------GKDFVSWTTMITG 274
LF +M D V T ++
Sbjct: 237 MELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDV 296
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ GNL + F +P + T A++ G V EA + F M R V + ++L
Sbjct: 297 YAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISL 356
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S V SA A QG Q+H VK + DV ++N+++ LY KC +V+AY +F +++
Sbjct: 357 SGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ 416
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-I 453
R+ VS+N++I+ QN E+ + +M G+ P+ T+ SVL AC + +E G +
Sbjct: 417 RDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVV 476
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+ K++K+ ++ + +VD+ + G++ EA L
Sbjct: 477 HGKAIKSGLGLDAFVS--STVVDMYCKCGAITEAQKL 511
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 223/505 (44%), Gaps = 80/505 (15%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLK- 83
A +F TMP R+ VS+ M+T +V G A L+ MP D V N LISGY +
Sbjct: 72 HAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPD--PDVVSWNTLISGYCQH 129
Query: 84 ------VGRCEEAARIFEAM--------------------------------VEKDVVAW 105
VG E +R A+ +E DV A
Sbjct: 130 GMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAG 189
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
++VD Y K + +A F M E+N V+W A + G ++ + + G +LF+ M+R G+
Sbjct: 190 SALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLG 249
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ F +C Q+H + F D ++G +I+ +Y + G + +A +
Sbjct: 250 VSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRA 309
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMI--------- 272
F + + + N+++ G V G EA +LF+ M G D +S + +
Sbjct: 310 FIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGY 369
Query: 273 ------------TGFSSK-----------GNLEKSIE---LFNMMPEKDDVTWTAIISGF 306
+GF G + +E +F M ++D V+W AII+
Sbjct: 370 FQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAAL 429
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
NE YE+ EMLR + P+ T SVL A A +L G +H +K + D
Sbjct: 430 EQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDA 489
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ +++V +Y KCG + +A ++ I + +VS+NS+ISGF+ EEA F +M D
Sbjct: 490 FVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDM 549
Query: 427 GLVPNQITFLSVLSACNHVGLVEEG 451
G+ P+ T+ +VL C ++ +E G
Sbjct: 550 GVKPDHFTYATVLDTCANLATIELG 574
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 163/348 (46%), Gaps = 43/348 (12%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG--------EIEEA 253
D + N+++T Y G D A +F M D VSWN+LISGY +G +E +
Sbjct: 84 DTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMS 143
Query: 254 YR-----------LFERMPGKDFVSWTTMITGFSSKGNLEK------------------- 283
R L + G D ++ I + K LE
Sbjct: 144 RRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLD 203
Query: 284 -SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
++ F+ M E++ V+W A I+G V NEQY F++M R + +Q +S + A
Sbjct: 204 DALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCA 263
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
A L+ Q+HAH +K SD + ++V +Y+K GN+VDA R F + N+ + N+
Sbjct: 264 AMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNA 323
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTL 461
M+ G + GLG EA+ LF+ M G+ + I+ V SAC V +G ++ ++K+
Sbjct: 324 MMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSG 383
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
++++ + ++D+ G+ +L EA + M + W A++ A
Sbjct: 384 FDVDVCVRN--AILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAA 428
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 151/323 (46%), Gaps = 36/323 (11%)
Query: 168 SITLTILFEACGRFFR--YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ T + L++ C R G H + GF + N ++ MY R G A+ V
Sbjct: 17 TATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGV 76
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSI 285
F M RD VSWN++++ YVH G+ + A LF MP D VSW T+I+G+ G S+
Sbjct: 77 FDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSV 136
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
L +EM R+ V ++ TL+ +L +
Sbjct: 137 GL-------------------------------SMEMSRRGVALDRTTLAVLLKSCGGLD 165
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
L G QIHA VK +E+DV ++LV +Y KC ++ DA R F + ERN VS+ + I+
Sbjct: 166 DLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIA 225
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNI 464
G QN + LF +M+ GL +Q + S +C + + ++ ++K +++
Sbjct: 226 GCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSS 285
Query: 465 EPGPEHYACMVDILGRAGSLAEA 487
+ +VD+ +AG+L +A
Sbjct: 286 DRVVG--TAIVDVYAKAGNLVDA 306
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 199/625 (31%), Positives = 341/625 (54%), Gaps = 47/625 (7%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVNMPARWRDSVCSNAL 77
++ +IF+ +P++N V ++A+I G V+ +F E +++ + + SV +
Sbjct: 229 DSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCA 288
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
LKVG + A + D+ + +D Y K G + +A+ IF+ +P+ ++ +
Sbjct: 289 GLSALKVGT-QLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYN 347
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
A++ G ++ + + F + + G+ FN I+L+ F AC +G Q+H L +
Sbjct: 348 AIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKS 407
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
+I + NSI+ MYG+ + EA +F M +RDAVSWN++I+ + NG EE LF
Sbjct: 408 TLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLF 467
Query: 258 ERM------P---------------------------------GKDFVSWTTMITGFSSK 278
M P G D +I +
Sbjct: 468 ASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKC 527
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G +E++ ++ + + ++ V+W AII+GF + E+A +F EML+ V+P+ T + VL
Sbjct: 528 GMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVL 587
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A A A++ G QIH ++K+ + SDV I ++LV +YSKCGN+ D+ +F ++ V
Sbjct: 588 DACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFV 647
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++N+MI G+AQ+GLGEEAL F +M+ E + PN TF+S+L AC H+G +++G YF +M
Sbjct: 648 TWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAM 707
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
T Y +EP EHY+CM+DI+GR+G ++EA+ LI M FE +W LL + H N+++
Sbjct: 708 LTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEI 767
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
A+ A +++LEP+ ++ ++LS++Y+ G + +R + +++K PGCSWI +KD
Sbjct: 768 AEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKD 827
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTI 603
+VH FL G K+ +EI L +
Sbjct: 828 EVHAFLVGNKTHPRYEEIYKILSVL 852
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/538 (27%), Positives = 270/538 (50%), Gaps = 52/538 (9%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D SN L+ YL+ A ++FE M ++DV+++ +M+ GY G + A E F P
Sbjct: 77 DVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTP 136
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEACGRFFRYREGV 188
+++VV+W +M+ G+++ D+FL M R + F+ T ++ +AC G+
Sbjct: 137 KRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGI 196
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
QVHGL+ R GF D++ G++++ MY + +D++ K+FS + ++ V W+++I+G V N
Sbjct: 197 QVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQND 256
Query: 249 EIEEAYRLFERMP---------------------------------------GKDFVSWT 269
E LF+ M G D T
Sbjct: 257 EHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGT 316
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+ ++ G+L + +FN +P+ + AII G V NE+ EA ++F +L+ +
Sbjct: 317 ATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGF 376
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N+++LS SA A+ G Q+H+ VK + S++ + NS++ +Y KC + +A +F
Sbjct: 377 NEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMF 436
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
++ R+ VS+N++I+ QNG EE LNLF M + P+Q T+ SVL AC+ +
Sbjct: 437 DEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALN 496
Query: 450 EGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
G I+ + +K+ ++ ++D+ + G + EA I+ + W A++
Sbjct: 497 SGMEIHNRIIKSGLGLDSFVG--GALIDMYCKCGMIEEA-KKIHDRIEQQTMVSWNAII- 552
Query: 509 AGRTHL--NLDLAKLAAQHL-MELEPDSATPYVVL---SDLYSV-IGKKRDGNRVRMK 559
AG T L + D + L M ++PD+ T +VL ++L SV +GK+ G ++++
Sbjct: 553 AGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLE 610
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/603 (24%), Positives = 273/603 (45%), Gaps = 99/603 (16%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A+++F M R+ +SY MI+G+ G A E + + P RD V N+++SG+L+ G
Sbjct: 97 AYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPK--RDVVSWNSMLSGFLQNG 154
Query: 86 RCEEAARIFEAM----------------------------------------VEKDVVAW 105
C ++ +F M KDVV
Sbjct: 155 ECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTG 214
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+++D Y K R+ ++ +IF ++P KN V W+A++ G ++ D G +LF M++ G+
Sbjct: 215 SALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIG 274
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ +F +C + G Q+H + F DI +G + + MY + G + +A ++
Sbjct: 275 VSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRI 334
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSS-KGN 280
F+ + K +N++I G V N + EA + F+ + G + +S + + +S KG+
Sbjct: 335 FNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGD 394
Query: 281 LE----------------------------------KSIELFNMMPEKDDVTWTAIISGF 306
L+ ++ +F+ M +D V+W A+I+
Sbjct: 395 LDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAH 454
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N EE F MLR + P+Q T SVL A ++ LN G +IH ++K + D
Sbjct: 455 EQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDS 514
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ +L+ +Y KCG + +A +I I+++ +VS+N++I+GF E+A + F +M
Sbjct: 515 FVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKM 574
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY--ACMVDILGRAGSL 484
+ P+ T+ VL AC ++ V G + + +E + Y + +VD+ + G++
Sbjct: 575 SVKPDNFTYAIVLDACANLASVGLG---KQIHGQIIKLELHSDVYITSTLVDMYSKCGNM 631
Query: 485 AEAIDLINSMTFEPPPG----VWGALLGAGRTHLNLDLAKLAAQHLMELE---PDSATPY 537
++ ++ FE P W A++ G L L M+LE P+ AT
Sbjct: 632 QDS-----ALVFEKAPNKDFVTWNAMI-CGYAQHGLGEEALGYFERMQLENVRPNHATFV 685
Query: 538 VVL 540
+L
Sbjct: 686 SIL 688
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 204/448 (45%), Gaps = 83/448 (18%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + + + C + + G Q H + GF D+ + N ++ MY R ++ A KVF M
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 230 S-------------------------------KRDAVSWNSLISGYVHNGEIEEAYRLFE 258
S KRD VSWNS++SG++ NGE ++ +F
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164
Query: 259 RMPG----------------------------------------KDFVSWTTMITGFSSK 278
M KD V+ + ++ ++
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
L+ S+++F+ +P K+ V W+AII+G V N+++ F EM + + +Q +SV
Sbjct: 225 KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVF 284
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+ A + L G+Q+HAH +K + SD+++ + + +Y+KCG++ DA RIF ++ + ++
Sbjct: 285 RSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQ 344
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
YN++I G +N G EAL F+ + GL N+I+ SAC + +G + + +
Sbjct: 345 CYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASI----KGDLDGRQL 400
Query: 459 KTLYNIEPGPEHYAC----MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
+L +++ C ++D+ G+ +L+EA + + M W A++ A +
Sbjct: 401 HSL-SVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVS-WNAVIAAHEQNG 458
Query: 515 NLD--LAKLAAQHLMELEPDSATPYVVL 540
N + L A+ + +EPD T VL
Sbjct: 459 NEEETLNLFASMLRLRMEPDQFTYGSVL 486
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 207/602 (34%), Positives = 324/602 (53%), Gaps = 54/602 (8%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFY------EA 57
R + YNAMIT +NN + A E+F + +RN V + +
Sbjct: 112 RDTVCYNAMITGYSHNN-DGFGAIELFRDL-LRNGFRPDNFTFTSVLGALALIVEDEKQC 169
Query: 58 EELYVNMPARWRDSVCS--NALISGYLKVGR---------CEEAARIFEAMVEKDVVAWG 106
++++ + V S NAL+S ++K A ++F+ M E+D ++W
Sbjct: 170 QQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWT 229
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+M+ GY + G + AR+ D M EK VVAW AM+ GY+ F + ++F M G+ +
Sbjct: 230 TMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW 289
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLV----SRFGFDYDIILGNSIITMYGRLGFMDEA 222
+ T T + AC + G QVH + R D+ + + N++ T+Y
Sbjct: 290 DEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLY--------- 340
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
W G+++EA ++F +MP KD VSW +++G+ + G ++
Sbjct: 341 --------------WKC--------GKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRID 378
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
++ F MPE++ +TWT +ISG N EE+ + F M + P + + A A
Sbjct: 379 EAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACA 438
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
A L G Q+HA +V++ +S +S N+L+++Y+KCG V A+ +F + + VS+N+
Sbjct: 439 WLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNA 498
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
MI+ Q+G G +AL LF M E ++P++ITFL+VLS C+H GLVEEG YFKSM LY
Sbjct: 499 MIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLY 558
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
I PG +HYA M+D+L RAG +EA D+I +M EP P +W ALL R H N+DL A
Sbjct: 559 GICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQA 618
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
A+ L EL P YV+LS++Y+ +G+ D +VR + K ++K PGCSWI +++KVH+
Sbjct: 619 AERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHV 678
Query: 583 FL 584
FL
Sbjct: 679 FL 680
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 198/411 (48%), Gaps = 39/411 (9%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE--KN 132
N LI Y K A +F+ + + D+VA +++ + G AREIF P ++
Sbjct: 54 NRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRD 113
Query: 133 VVAWTAMVDGYMKVDCFEDGF---DLFLSMRRGGMAFNSITLTILFEACGRFFR-YREGV 188
V + AM+ GY + DGF +LF + R G ++ T T + A ++
Sbjct: 114 TVCYNAMITGYSHNN---DGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQ 170
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLG---------FMDEANKVFSMMSKRDAVSWNS 239
Q+H V + G + + N++++++ + M A K+F M++RD +SW +
Sbjct: 171 QIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTT 230
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM----PEKD 295
+I+GYV NGE++ A + + M K V+W MI+G+ G +++E+F M + D
Sbjct: 231 MIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWD 290
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL--NQGSQI 353
+ T+T+++S N + + +LR + RP +L LS + A ATL G
Sbjct: 291 EFTYTSVLSACANAGFFLHGKQVHAYILRTEPRP---SLDFSLSVNNALATLYWKCGKVD 347
Query: 354 HAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
A V M D+ N+++S Y G + +A F + ERN++++ MISG AQNG
Sbjct: 348 EARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGF 407
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACN-----------HVGLVEEGF 452
GEE+L LF +MK EG P F + AC H LV GF
Sbjct: 408 GEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGF 458
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 156/336 (46%), Gaps = 46/336 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+ MI + N + A + M + V++ AMI+G+V G F EA E+
Sbjct: 220 MTERDELSWTTMIAGYVRNG-ELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEM 278
Query: 61 YVNM---PARWRD-------SVCSNA-------------------------------LIS 79
+ M +W + S C+NA L +
Sbjct: 279 FRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALAT 338
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
Y K G+ +EA ++F M KD+V+W +++ GY GR+ EA+ F++MPE+N++ WT M
Sbjct: 339 LYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVM 398
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ G + E+ LF M+ G AC G Q+H + R GF
Sbjct: 399 ISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGF 458
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D + GN++ITMY + G ++ A+ +F M D+VSWN++I+ +G +A LFE
Sbjct: 459 DSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFEL 518
Query: 260 MPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
M +D +++ T+++ S G +E+ F M
Sbjct: 519 MLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSM 554
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 129/275 (46%), Gaps = 48/275 (17%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE--KD 295
N LI Y + ++ A+ LF+ + D V+ TT+I SS GN + E+F P +D
Sbjct: 54 NRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRD 113
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT-LNQGSQIH 354
V + A+I+G+ +N A F ++LR RP+ T +SVL A A Q QIH
Sbjct: 114 TVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIH 173
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNV-------------------------------- 382
VVK S+ N+L+S++ KC +
Sbjct: 174 CAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIA 233
Query: 383 -------VDAYRIFTN-IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+DA R F + + E+ +V++N+MISG+ +G EAL +FRKM G+ ++ T
Sbjct: 234 GYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFT 293
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKT-LYNIEPGP 468
+ SVLSAC + G F++ K + + EP P
Sbjct: 294 YTSVLSACANAGF----FLHGKQVHAYILRTEPRP 324
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 331/627 (52%), Gaps = 49/627 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVNMPARWRDSVCSNALI 78
A +F MP +NAVS+ A++ GF + G +F +N +V
Sbjct: 283 AERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCAN 342
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
SG L+ G+ + I E D +VD Y K G +A ++F ++ + +VV+W+A
Sbjct: 343 SGNLRAGQIVHSLAI-RIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSA 401
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ + + ++F MR G+ N TL L A G +H V ++G
Sbjct: 402 IITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYG 461
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
F+YD + N+++TMY ++G + + +VF + RD +SWN+L+SG+ N + R+F
Sbjct: 462 FEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFN 521
Query: 259 RM----------------------------------------PGKDFVSWTTMITGFSSK 278
+M G DFV T ++ ++
Sbjct: 522 QMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVG-TALVDMYAKN 580
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
LE + +FN + ++D WT I++G+ + Q E+A + FI+M R+ V+PN+ TL+S L
Sbjct: 581 RFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSL 640
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
S + ATL+ G Q+H+ +K D+ + ++LV +Y+KCG V DA +F + R+ V
Sbjct: 641 SGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTV 700
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N++I G++Q+G G +AL F M DEG VP+++TF+ VLSAC+H+GL+EEG +F S+
Sbjct: 701 SWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSL 760
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+Y I P EHYACMVDILGRAG E I M +W +LGA + H N++
Sbjct: 761 SKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEF 820
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+ AA L ELEP+ + Y++LS++++ G D VR + ++K PGCSW+ +
Sbjct: 821 GERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNG 880
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISK 605
+VH+FL+ S ++EI + LQ + +
Sbjct: 881 QVHVFLSHDGSHPKIREIHLKLQDLHQ 907
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 204/400 (51%), Gaps = 39/400 (9%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
++ ++ + D W S+V+ Y K G A ++F ++PE++VV+WTA++ G++
Sbjct: 152 GQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS 211
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+LF MRR G+ N T +AC G QVH + G D+ +G++++
Sbjct: 212 GAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALV 271
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----V 266
+Y + G M A +VF M K++AVSWN+L++G+ G+ E+ LF RM G +
Sbjct: 272 DLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKF 331
Query: 267 SWTTMITGFSSKGNLE-----------------------------------KSIELFNMM 291
+ +T++ G ++ GNL ++++F +
Sbjct: 332 TLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRI 391
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ D V+W+AII+ Q EA F M V PNQ TL+S++SA+ L G
Sbjct: 392 EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGE 451
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
IHA V K E D ++ N+LV++Y K G+V D R+F R+++S+N+++SGF N
Sbjct: 452 SIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNE 511
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ L +F +M EG PN TF+S+L +C+ + V+ G
Sbjct: 512 TCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 551
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 231/475 (48%), Gaps = 53/475 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY---- 81
A ++F +P R+ VS+ A+ITGFV G A L+ M R+ V +N
Sbjct: 182 ACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMR---REGVEANEFTYATALKA 238
Query: 82 ------LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
L+ G+ + A + D+ ++VD Y K G ++ A +F MP++N V+
Sbjct: 239 CSMCLDLEFGK-QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVS 297
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W A+++G+ ++ E +LF M + F+ TL+ + + C R G VH L
Sbjct: 298 WNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAI 357
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R G + D + ++ MY + G +A KVF + D VSW+++I+ G+ EA
Sbjct: 358 RIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAE 417
Query: 256 LFERM------PGK---------------------------------DFVSWTTMITGFS 276
+F+RM P + D ++T +
Sbjct: 418 VFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYM 477
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G+++ +F +D ++W A++SGF +NE + R F +ML + PN T S
Sbjct: 478 KIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFIS 537
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L + ++ + ++ G Q+HA +VK +++ + + +LV +Y+K + DA IF + +R+
Sbjct: 538 ILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRD 597
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ ++ +++G+AQ+G GE+A+ F +M+ EG+ PN+ T S LS C+ + ++ G
Sbjct: 598 LFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 652
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 149/312 (47%), Gaps = 39/312 (12%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ C EG +HG V + G + D L NS++ +Y + G + A KVF + +RD
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMP--------------------------GK---- 263
VSW +LI+G+V G A LF M GK
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253
Query: 264 ---------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
D + ++ ++ G + + +F MP+++ V+W A+++GF E+
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
F M ++ ++ TLS+VL A + L G +H+ +++ E D I LV
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSKCG DA ++F I++ ++VS++++I+ Q G EA +F++M+ G++PNQ T
Sbjct: 374 MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433
Query: 435 FLSVLSACNHVG 446
S++SA +G
Sbjct: 434 LASLVSAATDLG 445
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 132/241 (54%), Gaps = 4/241 (1%)
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
W +++ ++ G+ + ++F +PE+D V+WTA+I+GFV A F EM R+ V
Sbjct: 166 WNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGV 225
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
N+ T ++ L A + L G Q+HA +K+ SD+ + ++LV LY+KCG +V A R
Sbjct: 226 EANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAER 285
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + ++N VS+N++++GFAQ G E+ LNLF +M + ++ T +VL C + G
Sbjct: 286 VFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGN 345
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV-WGAL 506
+ G I S+ E C+VD+ + G +A+ + + E P V W A+
Sbjct: 346 LRAGQI-VHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVF--VRIEDPDVVSWSAI 402
Query: 507 L 507
+
Sbjct: 403 I 403
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 69/109 (63%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S +L A+ LN+G IH V+K + D + NSLV++Y+KCG+ A ++F I E
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
R++VS+ ++I+GF G G A+NLF +M+ EG+ N+ T+ + L AC+
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACS 240
>gi|356528451|ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 195/549 (35%), Positives = 323/549 (58%), Gaps = 17/549 (3%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
RD +N I + G+ + A ++F+ M KDVV W SM+ Y + G + ++ +F M
Sbjct: 27 RDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHSM 86
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFD-LFLSMRRGGMAFNSITLTILFEACGRF---FRY 184
P +NVV+W +++ ++ D +D F L + + ++N+I + CGR R
Sbjct: 87 PLRNVVSWNSIIAACVQNDNLQDAFRYLAAAPEKNAASYNAIISGL--ARCGRMKDAQRL 144
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRL-GFMDEANKVFSMMSKRDAVSWNSLISG 243
E + +VS +++ Y R+ G + A +F M +R++VSW +I+G
Sbjct: 145 FEAMPCPNVVSY----------TAMVDGYARVEGGIGRARALFEAMPRRNSVSWVVMING 194
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
V NG EEA+ +F RMP K+ V+ T MITGF +G +E + +LF + +D V+W I+
Sbjct: 195 LVENGLCEEAWEVFVRMPQKNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIM 254
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
+G+ N + EEA F +M+R ++P+ LT SV A A+ A+L +GS+ HA ++K +
Sbjct: 255 TGYAQNGRGEEALNLFSQMIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIKHGFD 314
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
SD+S+ N+L++++SKCG +VD+ +F I ++VS+N++I+ FAQ+GL ++A + F +M
Sbjct: 315 SDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQM 374
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
+ P+ ITFLS+LSAC G V E F M Y I P EHYAC+VD++ RAG
Sbjct: 375 VTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYGIPPRSEHYACLVDVMSRAGQ 434
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
L A +IN M F+ +WGA+L A HLN++L +LAA+ ++ L+P ++ YV+LS++
Sbjct: 435 LQRACKIINEMPFKADSSIWGAVLAACSVHLNVELGELAARRILNLDPFNSGAYVMLSNI 494
Query: 544 YSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
Y+ GK +D +R+R+ K + ++K SW+ + +K H F+ G S ++ +I V L+ I
Sbjct: 495 YAAAGKWKDVHRIRVLMKEQGVKKQTAYSWLQIGNKTHYFVGGDPSHPNINDIHVALRRI 554
Query: 604 SKGTKEFDW 612
+ K D+
Sbjct: 555 TLHMKVKDF 563
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 175/325 (53%), Gaps = 35/325 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+N++I A + N+ ++ +AF A P +NA SY A+I+G R G +A+ L
Sbjct: 86 MPLRNVVSWNSIIAACVQND-NLQDAFRYLAAAPEKNAASYNAIISGLARCGRMKDAQRL 144
Query: 61 YVNMP-----------------------ARW-------RDSVCSNALISGYLKVGRCEEA 90
+ MP AR R+SV +I+G ++ G CEEA
Sbjct: 145 FEAMPCPNVVSYTAMVDGYARVEGGIGRARALFEAMPRRNSVSWVVMINGLVENGLCEEA 204
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+F M +K+ VA +M+ G+CK+GR+ +AR++F ++ +++V+W ++ GY + E
Sbjct: 205 WEVFVRMPQKNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGE 264
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ +LF M R GM + +T +F AC EG + H L+ + GFD D+ + N++I
Sbjct: 265 EALNLFSQMIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALI 324
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFV 266
T++ + G + ++ VF +S D VSWN++I+ + +G ++A F++M D +
Sbjct: 325 TVHSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPDGI 384
Query: 267 SWTTMITGFSSKGNLEKSIELFNMM 291
++ ++++ G + +S+ LF++M
Sbjct: 385 TFLSLLSACCRAGKVNESMNLFSLM 409
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 184/393 (46%), Gaps = 42/393 (10%)
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F+R R V L + F D+ N I R G +D A K+F M+ +D V+WNS+
Sbjct: 9 FWRQRHSFFV--LATLFSSTRDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSM 66
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+S Y NG ++ + LF MP ++ VSW ++I NL+ + PEK+ ++
Sbjct: 67 LSAYWQNGLLQRSKALFHSMPLRNVVSWNSIIAACVQNDNLQDAFRYLAAAPEKNAASYN 126
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDV----------------------------RPNQL 332
AIISG + ++A R F M +V R N +
Sbjct: 127 AIISGLARCGRMKDAQRLFEAMPCPNVVSYTAMVDGYARVEGGIGRARALFEAMPRRNSV 186
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
+ +++ + ++ V+M ++DV+ + ++++ + K G + DA +F I
Sbjct: 187 SWVVMINGLVENGLCEEAWEV---FVRMPQKNDVA-RTAMITGFCKEGRMEDARDLFQEI 242
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
R++VS+N +++G+AQNG GEEALNLF +M G+ P+ +TF+SV AC + +EEG
Sbjct: 243 RCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQPDDLTFVSVFIACASLASLEEG- 301
Query: 453 IYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
K+ L + C ++ + + G + ++ +L+ P W ++ A
Sbjct: 302 --SKAHALLIKHGFDSDLSVCNALITVHSKCGGIVDS-ELVFGQISHPDLVSWNTIIAAF 358
Query: 511 RTHLNLDLAKLAAQHL--MELEPDSATPYVVLS 541
H D A+ + + ++PD T +LS
Sbjct: 359 AQHGLYDKARSYFDQMVTVSVQPDGITFLSLLS 391
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 212/662 (32%), Positives = 356/662 (53%), Gaps = 58/662 (8%)
Query: 6 SASYNAMITALINNNCS-----IYEAFEIFATMP--MRNAVSYAAMITGFVRRGMFYEAE 58
+AS+ + +LI CS + AF +FA +P +R+ S+ +++ R
Sbjct: 45 AASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLLNPLSRHQPLAALS 104
Query: 59 ELYVNMPARWRDSVCSNALISGYLKVGRCEEAA----------RIFEAMVEKDVVAWGSM 108
M + ++ + + R A+ ++ + +V ++
Sbjct: 105 HFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTAL 164
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF-LSMRRGGMAFN 167
++ YCK G + +AR +FD+MP +N V+W AMV GY C E+ F+LF L ++ + N
Sbjct: 165 LNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKN 224
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + A GVQ+HGLV + G + + NS++TMY + MD A VF
Sbjct: 225 EFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFG 284
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNL-- 281
+R++++W+++I+GY NGE + A +F +M F ++ ++ S G L
Sbjct: 285 SSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVV 344
Query: 282 -------------EKSIEL--------------------FNMMPEKDDVT-WTAIISGFV 307
E+ + + F+ + + DDV WTA+I+G V
Sbjct: 345 GKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHV 404
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N ++EEA + M ++ V P+ LT++SVL A A A L G Q+HA ++K S
Sbjct: 405 QNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGS 464
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ +L ++YSKCGN+ D+ +F + +R+I+S+NS+ISGF+Q+G G +AL+LF +MK EG
Sbjct: 465 VGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEG 524
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ P+ ITF++VL AC+H+GLV+ G+ YF++M Y + P +HYAC+VDIL RAG L EA
Sbjct: 525 IAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEA 584
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
D I S+T + +W +LGA R+ + D+ A + LMEL + ++ Y++LS++Y+
Sbjct: 585 KDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQ 644
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGT 607
K D RVR +L+ + K PGCSW+ L ++V++F+ G + + ++I V L ++K
Sbjct: 645 RKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQQHPEAEKINVELIRLAKHM 704
Query: 608 KE 609
K+
Sbjct: 705 KD 706
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 180/399 (45%), Gaps = 55/399 (13%)
Query: 5 TSASYNAMI-TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+S S N + TAL+N C +I +A +F MP RNAVS+AAM++G+ EA EL
Sbjct: 152 SSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFEL 211
Query: 61 YVNM----PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKD-----VVAWGSMVDG 111
+ M P + V + L + + +G +V KD V S+V
Sbjct: 212 FRLMLQECPLEKNEFVATAVLSAVSVPLGLL--IGVQLHGLVLKDGLVGFVSVENSLVTM 269
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K + A +F E+N + W+AM+ GY + + +FL M G + T
Sbjct: 270 YAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTF 329
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM-S 230
+ A G Q HGL+ + GF+ + + ++++ MY + G +A F +
Sbjct: 330 VGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYD 389
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKD 264
D V W ++I+G+V NGE EEA L+ RM PGK
Sbjct: 390 VDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQ 449
Query: 265 FVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
+ T + T +S GNLE S+ +F MP++D ++W +IISGF + +
Sbjct: 450 LHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGR 509
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+A F EM + + P+ +T +VL A + +++G
Sbjct: 510 GRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRG 548
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 220/628 (35%), Positives = 327/628 (52%), Gaps = 79/628 (12%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+++A +F MP RN SY A+++ R G +A L+ +P D NA+++
Sbjct: 65 SLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDP--DQCSYNAVVAAL 122
Query: 82 LKVGRCEEAARIFEAMVEKDVV--------------------------------AWGS-- 107
+ GR +A R AM D V + GS
Sbjct: 123 AQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDV 182
Query: 108 -----MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
+VD Y K R EA+++FD MPE+N+V+W +++ Y + ++ LF+ M +
Sbjct: 183 YIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKD 242
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDE 221
G + +TL + AC REG QVH +V F D++L N+++ MY + G
Sbjct: 243 GFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGR--- 299
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNL 281
+W EA +F+RM + VS T+MITG++ N+
Sbjct: 300 --------------TW--------------EAKCVFDRMAIRSVVSETSMITGYAKSANV 331
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ +F M EK+ V W +I+ + +N + EEA R F+ + R+ V P T +VL+A
Sbjct: 332 GDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNAC 391
Query: 342 AATATLNQGSQIHAHVVKMNM------ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
A A L G Q H HV+K ESDV + NSLV +Y K G++ D ++F + R
Sbjct: 392 ANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAAR 451
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ VS+N+MI G+AQNG ++AL LF +M P+ +T + VLSAC H GLV+EG YF
Sbjct: 452 DNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYF 511
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
+SM + I P +HY CM+D+LGRAG L E +LI +M EP +W +LLGA R H N
Sbjct: 512 QSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKN 571
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+D+ + AA L EL+PD++ PYV+LS++Y+ +GK D RVR K + + K PGCSWI
Sbjct: 572 IDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIE 631
Query: 576 LKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ KV++FLA EI TL+ I
Sbjct: 632 IGRKVNVFLARDNIHPCRNEIHDTLRII 659
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 124/214 (57%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N+L+S Y G + +A R+F+ MP ++ S+ +++ + G + ++ LF +P+ D
Sbjct: 54 NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQC 113
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
++ A+++ + + +A R+ M D N + +S LSA A+ G Q+HA V
Sbjct: 114 SYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALV 173
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
K + SDV I +LV +Y+KC +A ++F + ERNIVS+NS+I+ + QNG +EAL
Sbjct: 174 TKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEAL 233
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
LF +M +G VP+++T SV+SAC + EG
Sbjct: 234 ALFVRMMKDGFVPDEVTLASVMSACAGLAAGREG 267
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N+L+S Y++ G++ DA R+F + RN SYN+++S A+ G ++AL LF + D
Sbjct: 54 NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPD---- 109
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
P+Q ++ +V++A G + + +M
Sbjct: 110 PDQCSYNAVVAALAQHGRGGDALRFLAAMHA 140
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/515 (36%), Positives = 297/515 (57%), Gaps = 32/515 (6%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
+++ SN LI Y+K G+ +A ++F+ M +++ +W +MV G+ K G ++ AR +FD MP
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMP 140
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E++VV+W MV GY + + F +RR G+ FN + L AC + + + Q
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQ 200
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
HG V GF +++L SII Y + G +
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCG-------------------------------Q 229
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+E A R F+ M KD WTT+I+G++ G++E + +LF MPEK+ V+WTA+I+G+V
Sbjct: 230 MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQ 289
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
+ A F +M+ V+P Q T SS L ASA+ A+L G QIH ++++ N+ + +
Sbjct: 290 GSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVT 349
Query: 370 NSLVSLYSKCGNVVDAYRIF-TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
+SL+ +YSK G++ + R+F D+++ V +N+MIS AQ+GLG +AL + M +
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRV 409
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
PN+ T + +L+AC+H GLVEEG +F+SM + I P EHYAC++D+LGRAG E +
Sbjct: 410 HPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELM 469
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
I M FEP +W A+LG R H N +L K AA+ L++L+P+S+ PY++LS +Y+ G
Sbjct: 470 SKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADHG 529
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
K ++R K +R+ K SWI +++KV F
Sbjct: 530 KWELVEKLRGIMKKRRVNKEKAVSWIEIENKVKAF 564
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 170/429 (39%), Gaps = 104/429 (24%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+A ++F M +RN S+ M++GFV+ GM A ++ +MP RD V N ++ GY +
Sbjct: 100 DACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMPE--RDVVSWNTMVIGYAQD 157
Query: 85 GRCEEA-------------------ARIFEAMVE--------------------KDVVAW 105
G EA A + A V+ +VV
Sbjct: 158 GNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLS 217
Query: 106 GSMVDGYCKKGRVIEAREIFD-------------------------------KMPEKNVV 134
S++D Y K G++ A+ FD +MPEKN V
Sbjct: 218 CSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPV 277
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WTA++ GY++ + DLF M + T + A R G Q+HG +
Sbjct: 278 SWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYM 337
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM-SKRDAVSWNSLISGYVHNGEIEEA 253
R + I+ +S+I MY + G ++ + +VF + K+D V WN++IS +G +A
Sbjct: 338 IRTNVRPNAIVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKA 397
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
++ + M F + P + T I++ ++ E
Sbjct: 398 LQMLDDMIK-------------------------FRVHPNR--TTLVVILNACSHSGLVE 430
Query: 314 EAFRWFIEM-LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
E RWF M ++ + P+Q + ++ ++ + + +M E D I N++
Sbjct: 431 EGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK---ELMSKIEEMPFEPDKHIWNAI 487
Query: 373 VSLYSKCGN 381
+ + GN
Sbjct: 488 LGVCRIHGN 496
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 32/174 (18%)
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV-VK 359
+++S + +A + ++ +R L+S+L T +L QG IH H+ +
Sbjct: 16 SLLSRHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-------------------------- 393
+ + N L+ +Y KCG +DA ++F +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVV 135
Query: 394 -----ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
ER++VS+N+M+ G+AQ+G EAL F++++ G+ N+ +F +L+AC
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTAC 189
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 188/516 (36%), Positives = 296/516 (57%), Gaps = 30/516 (5%)
Query: 74 SNALISGYLKVGRCE---EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
SNAL++ Y+K E +A ++ + M +KD + W +MV GY ++G V AR +F+++
Sbjct: 197 SNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDV 256
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K V W AM+ GY+ + F+LF M + + T T + AC + G V
Sbjct: 257 KFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSV 316
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG ++R + F+ EA + N+L++ Y G I
Sbjct: 317 HGQITRL-----------------QPNFVPEAALPVN----------NALVTLYSKCGNI 349
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
A R+F+ M KD VSW T+++G+ L+K++E+F MP K++++W ++SG+V+
Sbjct: 350 AVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGG 409
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
E+A + F M +DV+P T + +SA +L G Q+H H+V++ E S N
Sbjct: 410 FSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGN 469
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+++Y++CG V +A +F + + VS+N+MIS Q+G G EAL LF +M EG+ P
Sbjct: 470 ALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYP 529
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
++I+FL+VL+ACNH GLV+EGF YF+SMK + I PG +HY ++D+LGRAG + EA DL
Sbjct: 530 DRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDL 589
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I +M FEP P +W A+L RT +++L AA L ++ P Y++LS+ YS G+
Sbjct: 590 IKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRW 649
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
D RVR + + ++K PGCSWI +KVH+F+ G
Sbjct: 650 VDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVG 685
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 198/410 (48%), Gaps = 28/410 (6%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYVNM 64
+NAMI+ +++ + EAFE+F M + + ++ ++++ G F + ++ +
Sbjct: 262 WNAMISGYVHSG-MVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQI 320
Query: 65 PARWRDSV------CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
+ V +NAL++ Y K G A RIF+ M KDVV+W +++ GY + +
Sbjct: 321 TRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCL 380
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+A E+F++MP KN ++W MV GY+ ED LF MR + T AC
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISAC 440
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G + G Q+HG + + GF+ GN++ITMY R G + EAN +F +M D+VSWN
Sbjct: 441 GELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWN 500
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM--- 291
++IS +G EA LF+RM + D +S+ T++T + G +++ + F M
Sbjct: 501 AMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRD 560
Query: 292 ----PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
P +D +T +I + EA R I+ + P ++LS + +
Sbjct: 561 FGIIPGEDH--YTRLIDLLGRAGRIGEA-RDLIKTM--PFEPTPSIWEAILSGCRTSGDM 615
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
G+ + KM + D L + YS G VDA R+ + +R +
Sbjct: 616 ELGAHAADQLFKMTPQHD-GTYILLSNTYSAAGRWVDAARVRKLMRDRGV 664
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 197/426 (46%), Gaps = 50/426 (11%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE--KNVV 134
LI Y G AA +F A + VA S+V Y GR+ A FD +P+ ++ V
Sbjct: 65 LIHLYTLSGDLPAAATLFRA--DPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTV 122
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLS-MRRGGMAFNSITLTILFEACGRF--FRYREGVQVH 191
A++ Y + +F S + G + + + T L A G R Q+
Sbjct: 123 LHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQ 182
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMD---EANKVFSMMSKRDAVSWNSLISGYVHNG 248
V + G + + N+++ +Y + ++ +A KV M +DA++W +++ GYV G
Sbjct: 183 CSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRG 242
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
++ A +FE + K V W MI+G+ G + ++ ELF
Sbjct: 243 DVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFR------------------- 283
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN----MES 364
M+ + V ++ T +SVLSA A G +H + ++ E+
Sbjct: 284 ------------RMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEA 331
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
+ + N+LV+LYSKCGN+ A RIF N+ +++VS+N+++SG+ ++ ++A+ +F +M
Sbjct: 332 ALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
+ N+++++ ++S H G E+ F M+ +++P YA + G GSL
Sbjct: 392 YK----NELSWMVMVSGYVHGGFSEDALKLFNRMRA-EDVKPCDYTYAGAISACGELGSL 446
Query: 485 AEAIDL 490
L
Sbjct: 447 KHGKQL 452
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 214/627 (34%), Positives = 333/627 (53%), Gaps = 49/627 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVNMPARWRDSVCSNALI 78
A +F MP +N VS+ A++ G+ + G +F + +E +V
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+G L+ G+ A + + E D S+VD Y K G V +A ++F K+ +VVAW+A
Sbjct: 64 TGSLREGKVLHALAL-RSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ G + ++ +LF MRR G N TL+ L R G +HG + ++G
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
F+ D ++ N +I MY + +++ NKVF M+ D VSWN+L+SG+ + R+F
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242
Query: 259 RM------P--------------------GK--------------DFVSWTTMITGFSSK 278
+M P GK DFV T ++ ++
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVG-TALVDMYAKA 301
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
LE + F+ + +D +WT IISG+ +Q E+A ++F +M R+ ++PN+ TL+S L
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
S + ATL G Q+HA VK D+ + ++LV LY KCG + A IF + R+IV
Sbjct: 362 SGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIV 421
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N++ISG++Q+G GE+AL FR M EG++P++ TF+ VLSAC+ +GLVEEG F SM
Sbjct: 422 SWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSM 481
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+Y I P EHYACMVDILGRAG E I M P +W +LGA + H N+D
Sbjct: 482 SKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDF 541
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+ AA+ L E+EP + Y++LS++++ G+ D +R + I+K PGCSW+ +
Sbjct: 542 GEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDG 601
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISK 605
+VH+FL+ S ++EI L + +
Sbjct: 602 QVHVFLSQDGSHPKIREIYAKLDKLGQ 628
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 102/171 (59%)
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+E + LF MPEK+ V+W A+++G+ ++ + F +M + + ++ TLS+VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A T +L +G +HA ++ E D + SLV +YSKCG V DA ++FT I ++V++
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++MI+G Q G G+EA LF M+ +G PNQ T S++S ++G + G
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYG 171
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 170/378 (44%), Gaps = 29/378 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGF-----VRRG--MFYEA--EEL 60
N +I + + C + + ++F M + VS+ A+++GF RG +FY+ E
Sbjct: 191 NPLIMMYMKSRC-VEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGF 249
Query: 61 YVNM---PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
NM + R CS+ L + K + A I + + D ++VD Y K
Sbjct: 250 KPNMFTFISVLRS--CSSLLDPEFGK----QVHAHIIKNSSDDDDFVGTALVDMYAKARC 303
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ +A FD++ +++ +WT ++ GY + D E F M+R G+ N TL
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
C G Q+H + + G DI +G++++ +YG+ G M+ A +F + RD VSW
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSW 423
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
N++ISGY +G+ E+A F M + D ++ +++ S G +E+ + F+ M +
Sbjct: 424 NTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSK 483
Query: 294 ----KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+ A + + + FIE + ++ P L +VL A ++
Sbjct: 484 IYGINPSIEHYACMVDILGRAGKFNEVKIFIEEM--NLTPYSLIWETVLGACKLHGNVDF 541
Query: 350 GSQIHAHVVKMNMESDVS 367
G + + +M D S
Sbjct: 542 GEKAAKKLFEMEPMMDSS 559
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 352/639 (55%), Gaps = 64/639 (10%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N+ +++ + EA I TM ++ Y+ V RG+ E AR R
Sbjct: 64 NSGDVSILCKQGRLKEALGILNTMILQGTRVYSD-----VFRGLLQEC--------ARLR 110
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
L+ GR E A I ++ ++ + +++ Y K G + +AR +FD +
Sbjct: 111 S-----------LEQGR-EVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
++N+V+WTAM++ ++ + + + + +M+ G + +T L A + G +
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VH +++ G + + +G S++ MY + G + +A +F + +++ V+W LI+GY G+
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278
Query: 250 IEEAYRLFERMPGKDF----VSWTTMITGFSSK--------------------------- 278
++ A L E+M + +++T+++ G ++
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNA 338
Query: 279 --------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
G L+++ +LF +P +D VTWTA+++G+ ++EA F M ++ ++P+
Sbjct: 339 LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPD 398
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
++T +S L++ ++ A L +G IH +V DV +Q++LVS+Y+KCG++ DA +F
Sbjct: 399 KMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFN 458
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ ERN+V++ +MI+G AQ+G EAL F +MK +G+ P+++TF SVLSAC HVGLVEE
Sbjct: 459 QMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEE 518
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G +F+SM Y I+P EHY+C VD+LGRAG L EA ++I +M F+P P VWGALL A
Sbjct: 519 GRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSAC 578
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H +++ + AA+++++L+PD YV LS++Y+ G+ D +VR + + + K PG
Sbjct: 579 RIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPG 638
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
SWI + KVH+F KS + KEI L +++ KE
Sbjct: 639 QSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKE 677
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 228/457 (49%), Gaps = 60/457 (13%)
Query: 142 GYMKVDCFEDGFDLFLSMRRG---------------GMAFNSITLTILFEACGRFFRYRE 186
G+ KVD + D+ + ++G G S L + C R +
Sbjct: 55 GFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQ 114
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +VH + + G + L N++++MY + G + +A +VF + R+ VSW ++I +V
Sbjct: 115 GREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVA 174
Query: 247 NGEIEEAYRLFERM------PGK-DFVSW------------------------------- 268
+ EAY+ +E M P K FVS
Sbjct: 175 GNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRV 234
Query: 269 -TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T+++ ++ G++ K+ +F+ +PEK+ VTWT +I+G+ Q + A +M + +V
Sbjct: 235 GTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEV 294
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
PN++T +S+L L G ++H ++++ ++ + N+L+++Y KCG + +A +
Sbjct: 295 APNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARK 354
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F ++ R++V++ +M++G+AQ G +EA++LFR+M+ +G+ P+++TF S L++C+
Sbjct: 355 LFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAF 414
Query: 448 VEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
++EG I+ + + Y+++ + + +V + + GS+ +A + N M+ E W A+
Sbjct: 415 LQEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDDARLVFNQMS-ERNVVAWTAM 471
Query: 507 LGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
+ H A + + + ++PD T VLS
Sbjct: 472 ITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLS 508
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/531 (23%), Positives = 230/531 (43%), Gaps = 114/531 (21%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAE 58
DR S+ AMI A + N ++ EA++ + TM + + V++ +++ F + +
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNL-EAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQ 217
Query: 59 ELYVNMPARWRD--SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
++++ + + +L+ Y K G +A IF+ + EK+VV W ++ GY ++G
Sbjct: 218 KVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQG 277
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
+V A E+ +KM + V A N IT T + +
Sbjct: 278 QVDVALELLEKMQQAEV-------------------------------APNKITYTSILQ 306
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
C G +VH + + G+ +I + N++ITMY + G + EA K+F + RD V+
Sbjct: 307 GCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVT 366
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLE--KSIE---- 286
W ++++GY G +EA LF RM + D +++T+ +T SS L+ KSI
Sbjct: 367 WTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLV 426
Query: 287 -----------------------------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
+FN M E++ V WTA+I+G + + EA
Sbjct: 427 HAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALE 486
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
+F +M ++ ++P+++T +SVLSA + +G + H M ++ +
Sbjct: 487 YFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK---HFRSMYLDYGIK---------- 533
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
+V+ Y F ++ + G EEA N+ M P + +
Sbjct: 534 ---PMVEHYSCFVDL--------------LGRAGHLEEAENVILTMP---FQPGPSVWGA 573
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE-HYACMVDILGRAGSLAEA 487
+LSAC VE G ++ + + ++P + Y + +I AG +A
Sbjct: 574 LLSACRIHSDVERG---ERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDA 621
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 218/655 (33%), Positives = 349/655 (53%), Gaps = 62/655 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDS----VCSN 75
A ++F MP RN V++A +I+G+ + GM +A + M P R+ C
Sbjct: 54 ARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQE 113
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+++ + + GR I + + V +++ Y K G + AR +F M +K+ V+
Sbjct: 114 SML--WRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVS 171
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W +M+ G + CFED + SMR+ G+ ++ L +C G Q HG
Sbjct: 172 WNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGI 231
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG-EIEEAY 254
+ G D D+ + N+++ +Y + E KVFS M +RD VSWN++I +G + EA
Sbjct: 232 KLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAI 291
Query: 255 RLFERM------PGK-DFVSWTTMITGFSSK----------------------------- 278
+F M P + F++ ++ S+
Sbjct: 292 EVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACY 351
Query: 279 ---GNLEKSIELFNMMPEK-DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
G +E E+F+ M E+ D+V+W ++ISG+++NE +A M+++ R + T
Sbjct: 352 GKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTF 411
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
++VLSA A ATL G ++HA ++ +ESDV I ++LV +YSKCG + A R F +
Sbjct: 412 ATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPV 471
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
RN+ S+NSMISG+A++G G+ AL LF +MK G +P+ ITF+ VLSAC+H+GLV+EGF Y
Sbjct: 472 RNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEY 531
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA----- 509
FKSM +Y + P EHY+CMVD+LGRAG L + + IN M +P +W +LGA
Sbjct: 532 FKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGN 591
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
GR +L + AA+ L ++P +A YV+LS++Y+ GK D R R + ++K
Sbjct: 592 GR---KTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEA 648
Query: 570 GCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLE 623
GCSW+ +KD VH+F+AG S + I L+ + K ++ + P+ ++L LE
Sbjct: 649 GCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLE 703
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 193/396 (48%), Gaps = 43/396 (10%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ D+ ++++ Y + G + AR++FD+MP++N V W ++ GY + ED +
Sbjct: 32 DSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKE 91
Query: 159 MRRGGMAFNSITLTILFEACGRFFRY-REGVQVHGLVSRFGF-DYDIILGNSIITMYGRL 216
M G N AC + R+G QVHG R G D + +GN +I MY +
Sbjct: 92 MIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKC 151
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER------MPGK------- 263
G +D A VF +M +D+VSWNS+I+G N E+A + + MP
Sbjct: 152 GDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISAL 211
Query: 264 --------------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
D T++ ++ L + ++F+ M E+D V
Sbjct: 212 SSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQV 271
Query: 298 TWTAIISGFVNN-EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+W +I ++ EA F+EM+R PN++T ++L+ ++ +T QIHA
Sbjct: 272 SWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHAL 331
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEE 415
++K N++ D +I+N+L++ Y K G + + IF+ + E R+ VS+NSMISG+ N L +
Sbjct: 332 ILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCK 391
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
A++L M G + TF +VLSAC V +E G
Sbjct: 392 AMDLVWLMMQRGQRLDCFTFATVLSACATVATLECG 427
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 191/403 (47%), Gaps = 51/403 (12%)
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H V + GFD D+ L N++I +Y R+G A K+F M R+ V+W LISGY NG
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 251 EEAYRLFERMPGKDFVS-----------------W------------------------T 269
E+A + + M + F+ W
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+I ++ G+++ + +F +M +KD V+W ++I+G N+ +E+A + + M + + P
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ L S LS+ A+ + G Q H +K+ ++ DVS+ N+L++LY++ + + ++F
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVF 262
Query: 390 TNIDERNIVSYNSMISGFAQNGLG-EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
+ + ER+ VS+N++I A +G EA+ +F +M G PN++TF+++L+ + +
Sbjct: 263 SWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTS 322
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
+ ++ YN++ ++ G++G + ++ + M+ W +++
Sbjct: 323 KLSH-QIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI- 380
Query: 509 AGRTHLNL-----DLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
+G H L DL L Q L D T VLS +V
Sbjct: 381 SGYIHNELLCKAMDLVWLMMQRGQRL--DCFTFATVLSACATV 421
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/515 (21%), Positives = 211/515 (40%), Gaps = 117/515 (22%)
Query: 1 MADRTSASYNAMITALINNNC-----SIYEAFEIFATMP----MRNAVSYAAMITGFVRR 51
M D+ S S+N+MIT L N C Y + MP + +A+S A + G +
Sbjct: 164 MVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASL-GCILL 222
Query: 52 GMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
G E + + + D SN L++ Y + R E ++F M+E+D V+W +++
Sbjct: 223 GQQTHGEGIKLGLDM---DVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGA 279
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
G + + ++FL M R G + N +T
Sbjct: 280 LADSGASV------------------------------SEAIEVFLEMMRAGWSPNRVTF 309
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS- 230
L + Q+H L+ ++ D + N+++ YG+ G M+ ++FS MS
Sbjct: 310 INLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSE 369
Query: 231 KRDAVSWNSLISGYVHNGEIEEA----YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
+RD VSWNS+ISGY+HN + +A + + +R D ++ T+++ ++ LE +E
Sbjct: 370 RRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGME 429
Query: 287 L-----------------------------------FNMMPEKDDVTWTAIISGFVNNEQ 311
+ FN+MP ++ +W ++ISG+ +
Sbjct: 430 VHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGH 489
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
+ A R F M P+ +T VLSA + +++G +
Sbjct: 490 GDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFE------------------- 530
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
Y K ++ + Y + ++ Y+ M+ + G ++ N KM + PN
Sbjct: 531 ----YFK--SMTEVYGLVPRVEH-----YSCMVDLLGRAGELDKIENFINKMP---IKPN 576
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+ + +VL AC G + + ++ + L+N++P
Sbjct: 577 ILIWRTVLGACCR-GNGRKTELGRRAAEMLFNMDP 610
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 199/468 (42%), Gaps = 68/468 (14%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM------PMR-NAVSYAAMITGFVRRGM 53
M +R S+N +I AL ++ S+ EA E+F M P R ++ A ++ +
Sbjct: 265 MLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKL 324
Query: 54 FYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVE-KDVVAWGSMVDGY 112
++ L + + D+ NAL++ Y K G E IF M E +D V+W SM+ GY
Sbjct: 325 SHQIHALILKYNVK-DDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGY 383
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
+ +A ++ W M G ++DCF T
Sbjct: 384 IHNELLCKAMDL----------VWLMMQRG-QRLDCF--------------------TFA 412
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ AC G++VH R + D+++G++++ MY + G +D A++ F++M R
Sbjct: 413 TVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR 472
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM--PGK--DFVSWTTMITGFSSKGNLEKSIELF 288
+ SWNS+ISGY +G + A RLF RM G+ D +++ +++ S G +++ E F
Sbjct: 473 NLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYF 532
Query: 289 NMMPE----KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
M E V + + + + FI + ++PN L +VL A
Sbjct: 533 KSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFIN--KMPIKPNILIWRTVLGACCRG 590
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRIFTNIDERNI-----V 398
A + NM+ ++ L+S +Y+ G D R + E +
Sbjct: 591 NGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGC 650
Query: 399 SYNSMISGF-----AQNGLGEEAL------NLFRKMKDEGLVPNQITF 435
S+ +M G N E+ L L +K++D G VP QI F
Sbjct: 651 SWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVP-QIKF 697
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 222/643 (34%), Positives = 346/643 (53%), Gaps = 61/643 (9%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYE--AEELYVNMPARWRDSVCSNA------LISG 80
+F + +N VSY +I G G EL+ M A +++ +A +
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIA---NNILPDAHTFPGVFTAA 121
Query: 81 YLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
L +G C AR + K DV S+V+ YCK G V EAR++FD+MPE+N+V+
Sbjct: 122 ALNLG-CNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVS 180
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA--CGRFFRYREGVQVHGL 193
WT M+ GY ++ +F MR N T + A C F G QVH +
Sbjct: 181 WTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVD--SGKQVHCV 238
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V + G + + N+++TMY + G ++ + +F M S ++A++W++LI+GY G+ +A
Sbjct: 239 VVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKA 298
Query: 254 YRLFERMPGKDFVSWTTMITGF--------------SSKGNLEKS------------IEL 287
+LF +M FV + G + G L KS +++
Sbjct: 299 LKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDM 358
Query: 288 -------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
F+ + E D V WT+II+G+V N + EEA + M + + PN+LT+
Sbjct: 359 YAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTM 418
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+SVL A + A L QG QIHA +K + ++SI+++L ++Y+KCG++ + IF + +
Sbjct: 419 ASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQ 478
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
R+IVS+N+MISG +QNG G EAL LF +M+ EG P+ ITF++VLSAC+H+G+V+ G+ Y
Sbjct: 479 RDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAY 538
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F M + + P EHYACMVD+L RAG L EA + I S + +W LL A R H
Sbjct: 539 FNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHC 598
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
N +L A + LMEL ++ YV+LS +Y+ +G+ D RVR K++ +RK GCSWI
Sbjct: 599 NYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWI 658
Query: 575 ILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHD 616
LK VH+F+ G + ++EI+ + + K K+ + P H+
Sbjct: 659 ELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMKDDGYRPGHE 701
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 233/487 (47%), Gaps = 62/487 (12%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF--DLFLSMRRGGM 164
+++ Y K G + A+ +F+ + KNVV++ ++ G F +LF M +
Sbjct: 48 NLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNI 107
Query: 165 AFNSITLTILFEAC----GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
++ T +F A G F R QVH L + D+ +G+S++ Y ++G +
Sbjct: 108 LPDAHTFPGVFTAAALNLGCNFDAR---QVHVLGIKTASIDDVFVGSSLVNFYCKVGCVF 164
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------------------- 260
EA K+F M +R+ VSW ++ISGY +EA +F M
Sbjct: 165 EARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALV 224
Query: 261 ------PGK------------DFVS-WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
GK +FVS ++T ++ GNL S+ LF M +K+ +TW+A
Sbjct: 225 CPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSA 284
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+I+G+ +A + F +M P++ TL VL A + A + +G Q H +++K
Sbjct: 285 LITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSG 344
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
E+ + +LV +Y+K G DA + F + E ++V + S+I+G+ QNG EEAL+++
Sbjct: 345 YETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYG 404
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M+ ++PN++T SVL AC+++ +E+G I+ +++K Y + P + + + +
Sbjct: 405 RMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIK--YGLGPELSIRSALSTMYAK 462
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALL------GAGRTHLNLDLAKLAAQHLMELEPDSA 534
GSL E + + M + W A++ G GR L L L +PD
Sbjct: 463 CGSLEEGVLIFRRM-LQRDIVSWNAMISGLSQNGHGREALEL----FEEMRLEGTKPDHI 517
Query: 535 TPYVVLS 541
T VLS
Sbjct: 518 TFVTVLS 524
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 42/289 (14%)
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY--RLFERM-- 260
L N++I Y + G + A VF + ++ VS+N LI G HNG + LF RM
Sbjct: 45 LANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIA 104
Query: 261 ----------PG----------------------------KDFVSWTTMITGFSSKGNLE 282
PG D ++++ + G +
Sbjct: 105 NNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVF 164
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
++ +LF+ MPE++ V+WT +ISG+ + + +EA F M + N+ +SVLSA
Sbjct: 165 EARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALV 224
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
++ G Q+H VVK + VS+ N+LV++Y+KCGN+ + +F ++N +++++
Sbjct: 225 CPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSA 284
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+I+G++Q G +AL LF KM G VP++ T + VL AC+ V +EEG
Sbjct: 285 LITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEG 333
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS-IQNSLVSLYSKCGNVVDAYR 387
P + ++L A +L +G +HAH++K+ S + + N+L+ Y+KCG++ A
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEE--ALNLFRKMKDEGLVPNQITFLSVLSA 441
+F N+ +N+VSYN +I G + NG L LFR+M ++P+ TF V +A
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTA 120
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/616 (33%), Positives = 335/616 (54%), Gaps = 51/616 (8%)
Query: 11 AMITALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
A+ TALI + C I A E+F M RN VS+ A+I + EA ELY M
Sbjct: 193 AVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQM--- 249
Query: 68 WRDSVCSNAL-ISGYLKVGRCEEA--------ARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
+ + NA+ L EA + I E +E D++ +++ YCK V
Sbjct: 250 LQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSV 309
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKV-----DCFEDGFDLFLSMRRGGMAFNSITLTI 173
EAREIFD+M +++V++W+AM+ GY + + ++ F L MRR G+ N +T
Sbjct: 310 QEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMS 369
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ AC +G Q+H +S+ GF+ D L +I MY + G
Sbjct: 370 ILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCG---------------- 413
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
I EA ++F +M K+ V+WT+ ++ + G+L + ++F+ MP
Sbjct: 414 ---------------SIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPT 458
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
++ V+W +I+G+ N + F M + +P+++T+ ++L A A A L +G +
Sbjct: 459 RNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLV 518
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
HA VK+ +ESD + SL+ +YSKCG V +A +F + R+ V++N+M++G+ Q+G G
Sbjct: 519 HAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDG 578
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
EA++LF++M E + PN+IT +V+SAC+ GLV+EG F+ M+ + + P +HY C
Sbjct: 579 LEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGC 638
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDS 533
MVD+LGRAG L EA + I SM EP VW ALLGA ++H N+ LA+ AA H++ELEP
Sbjct: 639 MVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSY 698
Query: 534 ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDL 593
A+ Y+ LS++Y+ G+ D +VR + ++K G S I + ++H F+A + ++
Sbjct: 699 ASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEI 758
Query: 594 KEIEVTLQTISKGTKE 609
I L+T++K KE
Sbjct: 759 DAIHAELETLTKEMKE 774
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 250/525 (47%), Gaps = 81/525 (15%)
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
E VE D+ S+++ Y K V A ++F +M ++VV W++M+ Y + FD
Sbjct: 84 ELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFD 143
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
F M + N IT + +AC + +G ++H +V G + D+ + ++ITMY
Sbjct: 144 TFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYS 203
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG------ 262
+ G + A +VF M++R+ VSW ++I + ++ EA+ L+E+M P
Sbjct: 204 KCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVS 263
Query: 263 ---------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
D + +IT + +++++ E+F+ M ++D
Sbjct: 264 LLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRD 323
Query: 296 DVTWTAII-----SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
++W+A+I SG+ + E +E F+ M R+ V PN++T S+L A A L QG
Sbjct: 324 VISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQG 383
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD-------------------------- 384
QIHA + K+ E D S+Q ++ ++Y+KCG++ +
Sbjct: 384 RQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKC 443
Query: 385 -----AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
A ++F+ + RN+VS+N MI+G+AQNG + L MK EG P+++T +++L
Sbjct: 444 GDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITIL 503
Query: 440 SACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
AC + +E G ++ +++K +E ++ + + G +AEA + + M+
Sbjct: 504 EACGALAGLERGKLVHAEAVK--LGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRD 561
Query: 499 PPGVWGALL-GAGRTHLNLDLAKLAAQHLME-LEPDSATPYVVLS 541
W A+L G G+ L+ L + L E + P+ T V+S
Sbjct: 562 TVA-WNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVIS 605
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 203/391 (51%), Gaps = 47/391 (12%)
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
+ L +++ G+ NS T + E C + R+ +G VH + G + DI LGNS
Sbjct: 37 LREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNS 96
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG 262
+I Y + + A +VF M+ RD V+W+S+I+ Y N +A+ FERM P
Sbjct: 97 LINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPN 156
Query: 263 K---------------------------------DFVSWTTMITGFSSKGNLEKSIELFN 289
+ D T +IT +S G + + E+F+
Sbjct: 157 RITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFH 216
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
M E++ V+WTAII + + EAF + +ML+ + PN +T S+L++ LN+
Sbjct: 217 KMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G +IH+H+ + +E+D+ + N+L+++Y KC +V +A IF + +R+++S+++MI+G+AQ
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQ 336
Query: 410 NGLG-----EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYN 463
+G +E L +M+ EG+ PN++TF+S+L AC G +E+G I+ + K +
Sbjct: 337 SGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFE 396
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
++ + + ++ + GS+ EA + + M
Sbjct: 397 LDRSLQ--TAIFNMYAKCGSIYEAEQVFSKM 425
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N T V+ A G +H + ++ +E D+ + NSL++ YSK +V A ++F
Sbjct: 55 NSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVF 114
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ R++V+++SMI+ +A N +A + F +M D + PN+ITFLS+L ACN+ ++E
Sbjct: 115 RRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILE 174
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+G +K + +E ++ + + G ++ A ++ + MT E W A++ A
Sbjct: 175 KGRKIHTIVKAM-GMETDVAVATALITMYSKCGEISVACEVFHKMT-ERNVVSWTAIIQA 232
Query: 510 GRTHLNLDLAKLAAQHLME--LEPDSAT 535
H L+ A + +++ + P++ T
Sbjct: 233 NAQHRKLNEAFELYEQMLQAGISPNAVT 260
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/616 (33%), Positives = 335/616 (54%), Gaps = 51/616 (8%)
Query: 11 AMITALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
A+ TALI + C I A EIF M RN VS+ A+I + EA ELY M
Sbjct: 215 AVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKM--- 271
Query: 68 WRDSVCSNAL-ISGYLKVGRCEEA--------ARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
+ + NA+ L EA + I E +E DVV +++ YCK +
Sbjct: 272 LQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCI 331
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKV-----DCFEDGFDLFLSMRRGGMAFNSITLTI 173
+ARE FD+M +++V++W+AM+ GY + + ++ F L MRR G+ N +T
Sbjct: 332 QDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMS 391
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ +AC +G Q+H +S+ GF+ D L +I MY + G
Sbjct: 392 ILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCG---------------- 435
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
I EA ++F +M K+ V+W +++T + G+L + ++F+ M
Sbjct: 436 ---------------SIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMST 480
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
++ V+W +I+G+ + + F M + +P+++T+ S+L A A + L +G +
Sbjct: 481 RNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLV 540
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
HA VK+ +ESD + SL+ +YSKCG V +A +F I R+ V++N+M++G+ Q+G+G
Sbjct: 541 HAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIG 600
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
EA++LF++M E + PN+ITF +V+SAC GLV+EG F+ M+ + ++PG +HY C
Sbjct: 601 PEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGC 660
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDS 533
MVD+LGRAG L EA + I M EP VW ALLGA ++H N+ LA+ AA H++ LEP +
Sbjct: 661 MVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSN 720
Query: 534 ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDL 593
A+ YV LS++Y+ G+ D +VR K ++K G S I + ++H F+A + ++
Sbjct: 721 ASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEI 780
Query: 594 KEIEVTLQTISKGTKE 609
I L+ ++K KE
Sbjct: 781 DSIHAELEMLTKEMKE 796
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 201/403 (49%), Gaps = 46/403 (11%)
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
++ L +++ G+ NS T + E C + R+ +G VH + G DI LGNS
Sbjct: 59 LKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNS 118
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG 262
+I Y + G + +VF M+ RD V+W+S+I+ Y N +A+ FERM P
Sbjct: 119 LINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPN 178
Query: 263 K---------------------------------DFVSWTTMITGFSSKGNLEKSIELFN 289
+ D T +IT +S G + + E+F
Sbjct: 179 RITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQ 238
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
M E++ V+WTAII + + EAF + +ML+ + PN +T S+L++ LN+
Sbjct: 239 KMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNR 298
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G +IH+H+ + +E+DV + N+L+++Y KC + DA F + +R+++S+++MI+G+AQ
Sbjct: 299 GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ 358
Query: 410 NGLG-----EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
+G +E L +M+ EG+ PN++TF+S+L AC+ G +E+G + +
Sbjct: 359 SGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKV-GF 417
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
E + ++ + GS+ EA + + M + W +LL
Sbjct: 418 ESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVA-WASLL 459
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 244/533 (45%), Gaps = 80/533 (15%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D+ S+++ Y K G V ++F +M ++VV W++M+ Y + FD F M+
Sbjct: 112 DIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMK 171
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+ N IT + +AC + + ++H +V G + D+ + ++ITMY + G +
Sbjct: 172 DANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEIS 231
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG------------ 262
A ++F M +R+ VSW ++I + ++ EA+ L+E+M P
Sbjct: 232 LACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCN 291
Query: 263 ---------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
D V +IT + ++ + E F+ M ++D ++W+A
Sbjct: 292 TPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSA 351
Query: 302 II-----SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+I SG+ + E +E F+ M R+ V PN++T S+L A + L QG QIHA
Sbjct: 352 MIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAE 411
Query: 357 VVKMNMESDVSIQN-------------------------------SLVSLYSKCGNVVDA 385
+ K+ ESD S+Q SL+++Y KCG++ A
Sbjct: 412 ISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSA 471
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F+ + RN+VS+N MI+G+AQ+G + L MK EG P+++T +S+L AC +
Sbjct: 472 EKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGAL 531
Query: 446 GLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
+E G ++ +++K +E ++ + + G + EA + + ++ W
Sbjct: 532 SALERGKLVHAEAVK--LGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVA-WN 588
Query: 505 ALL-GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
A+L G G+ + + L + L E P + + + G ++G +
Sbjct: 589 AMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREI 641
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 2/209 (0%)
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+ +EA + + ++ + N T ++ A G +H + ++ + D+ + N
Sbjct: 58 RLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGN 117
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SL++ YSK G+V ++F + R++V+++SMI+ +A N +A + F +MKD + P
Sbjct: 118 SLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEP 177
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
N+ITFLS+L ACN+ ++E+ +K +E ++ + + G ++ A ++
Sbjct: 178 NRITFLSILKACNNYSMLEKAREIHTVVKA-SGMETDVAVATALITMYSKCGEISLACEI 236
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLA 519
M E W A++ A H L+ A
Sbjct: 237 FQKMK-ERNVVSWTAIIQANAQHRKLNEA 264
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 213/657 (32%), Positives = 350/657 (53%), Gaps = 48/657 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PAR 67
NA++T L + + A ++F M R+ VSY ++I+G ++G +A EL+ M
Sbjct: 310 NALVT-LYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCL 368
Query: 68 WRDSVCSNALIS-----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
D V +L+S G L VG+ + I +A + D++ G+++D Y K + A
Sbjct: 369 KPDCVTVASLLSACSSVGALLVGKQFHSYAI-KAGMSSDIILEGALLDLYVKCSDIKTAH 427
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
E F +NVV W M+ Y +D + F +F M+ G+ N T + C
Sbjct: 428 EFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLR 487
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G Q+H V + GF +++ + + +I MY +LG +D A K+F + ++D VSW ++I+
Sbjct: 488 AVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIA 547
Query: 243 GYVHNGEIEEAYRLFERMPGK--------------------------------------- 263
GY + + EA LF+ M +
Sbjct: 548 GYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSD 607
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
D +++ ++ G + + F+ + KD+++W ++ISGF + EEA F +M
Sbjct: 608 DLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMS 667
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ N T +SA+A A + G QIHA ++K +S+ + N L++LY+KCGN+
Sbjct: 668 KAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNID 727
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
DA R F + E+N +S+N+M++G++Q+G G +AL+LF MK G++PN +TF+ VLSAC+
Sbjct: 728 DAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACS 787
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
HVGLV+EG YF+SM+ ++ + P PEHYAC+VD+LGR+G L+ A + M +P V
Sbjct: 788 HVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVC 847
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
LL A H N+D+ + AA HL+ELEP + YV+LS++Y+V GK +R R K +
Sbjct: 848 RTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDR 907
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
++K PG SWI + + VH F AG + ++ +I L+ +++ E + SLL
Sbjct: 908 GVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLL 964
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 204/400 (51%), Gaps = 39/400 (9%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
AR E + ++D Y K G + A+++FD + +++ V+W AM+ G + C E
Sbjct: 194 ARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEE 253
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ LF M G+ + + AC + Y+ G Q+HGLV + GF + + N+++
Sbjct: 254 EAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALV 313
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFV 266
T+Y RLG A +VF+ M +RD VS+NSLISG G ++A LF++M D V
Sbjct: 314 TLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCV 373
Query: 267 SWTTMITGFSSKG-----------------------------------NLEKSIELFNMM 291
+ ++++ SS G +++ + E F
Sbjct: 374 TVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLST 433
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
++ V W ++ + + E+F+ F +M + + PNQ T S+L ++ ++ G
Sbjct: 434 ETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGE 493
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
QIH V+K + +V + + L+ +Y+K G + A +IF + E+++VS+ +MI+G+AQ+
Sbjct: 494 QIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHE 553
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
EALNLF++M+D+G+ + I F S +SAC + + +G
Sbjct: 554 KFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQG 593
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 220/475 (46%), Gaps = 60/475 (12%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
LK+G C E VV ++D Y G + A +FD+MP + + W ++
Sbjct: 95 LKMGFCAE------------VVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLH 142
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF---FRYREGVQVHGLVSRFG 198
++ LF M + + + T + CG F E ++H G
Sbjct: 143 RFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVE--KIHARTITHG 200
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF- 257
++ + + N +I +Y + GF++ A KVF + KRD+VSW +++SG +G EEA LF
Sbjct: 201 YENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFC 260
Query: 258 ------------------------------ERMPG---KDFVSWTT-----MITGFSSKG 279
E++ G K S T ++T +S G
Sbjct: 261 QMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLG 320
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
N + ++FN M ++D+V++ ++ISG ++A F +M ++P+ +T++S+LS
Sbjct: 321 NFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLS 380
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A ++ L G Q H++ +K M SD+ ++ +L+ LY KC ++ A+ F + + N+V
Sbjct: 381 ACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVL 440
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSM 458
+N M+ + E+ +F +M+ EG+ PNQ T+ S+L C+ + V+ G I+ + +
Sbjct: 441 WNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVL 500
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
KT + + ++D+ + G L A+ + + E W A++ H
Sbjct: 501 KTGFQFNVYVS--SVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQH 552
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 165/362 (45%), Gaps = 44/362 (12%)
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F K E N TA+ Y + +G + M G+ NS T L + C +
Sbjct: 29 FQKFLEHN----TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWF 84
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
+G ++HG + + GF +++L ++ +Y G +D A VF M R WN ++ +
Sbjct: 85 SDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRF 144
Query: 245 VHNGEIEEAYRLFERM-------------------PGKDF-------VSWTTMITGFSS- 277
V LF RM G D + T+ G+ +
Sbjct: 145 VAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENS 204
Query: 278 -------------KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
G L + ++F+ + ++D V+W A++SG + EEA F +M
Sbjct: 205 LFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHT 264
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
V P SSVLSA G Q+H V+K + + N+LV+LYS+ GN +
Sbjct: 265 SGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIP 324
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A ++F + +R+ VSYNS+ISG +Q G ++AL LF+KM + L P+ +T S+LSAC+
Sbjct: 325 AEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSS 384
Query: 445 VG 446
VG
Sbjct: 385 VG 386
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 163/349 (46%), Gaps = 23/349 (6%)
Query: 221 EANKV-FSMMSKRDAVSWNS-----LISGYVHNGEIEEAYRLFERMPGKDFVSWTTM--- 271
EAN + F + + V NS L+ G + +G + ++L ++ F + +
Sbjct: 49 EANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCER 108
Query: 272 -ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+ + + G+L+ ++ +F+ MP + W ++ FV + F ML++ V+P+
Sbjct: 109 LMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPD 168
Query: 331 QLTLSSVL-SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ T + VL + +IHA + E+ + + N L+ LY K G + A ++F
Sbjct: 169 ERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVF 228
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ +R+ VS+ +M+SG +Q+G EEA+ LF +M G+ P F SVLSAC V +
Sbjct: 229 DGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYK 288
Query: 450 EG-FIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
G ++ +K +++E Y C +V + R G+ A + N+M +
Sbjct: 289 VGEQLHGLVLKQGFSLET----YVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLI 344
Query: 507 LGAGRTHLNLDLAKLAAQHLME-LEPDSATPYVVLSDLYSV----IGKK 550
G + + +L + ++ L+PD T +LS SV +GK+
Sbjct: 345 SGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ 393
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 315/624 (50%), Gaps = 81/624 (12%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N LI Y K G E+ ++F+ M ++++ W S+V G K G + EA +F MPE++
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W +MV G+ + D E+ F M + G N + + AC +GVQVH L+
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 195 SRFGFDYDIILG-------------------------------NSIITMYGRLGFMDEAN 223
++ F D+ +G NS+IT + + G EA
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 224 KVFSMMS----------------------------------------KRDAVSWNSLISG 243
VF MM + D + N+ +
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
Y I+EA +F+ MP ++ ++ T+MI+G++ + + + +F M E++ V+W A+I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM- 362
+G+ N + EEA F + R+ V P + +++L A A A L+ G Q H HV+K
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 363 -----ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
E D+ + NSL+ +Y KCG V + Y +F + ER+ VS+N+MI GFAQNG G EAL
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
LFR+M + G P+ IT + VLSAC H G VEEG YF SM + + P +HY CMVD+
Sbjct: 479 ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL 538
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGRAG L EA +I M +P +WG+LL A + H N+ L K A+ L+E+EP ++ PY
Sbjct: 539 LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPY 598
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
V+LS++Y+ +GK D VR + + + K PGCSWI ++ H+F+ KS K+I
Sbjct: 599 VLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIH 658
Query: 598 VTLQTISKGTKEFDWPKHDWSLLG 621
L + + P+ D + +G
Sbjct: 659 SLLDILIAEMR----PEQDHTEIG 678
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 177/380 (46%), Gaps = 36/380 (9%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M DR S+N++IT N ++ EA ++F M + V+ A++I+
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAV-EALDVFQMMLESRVEPDEVTLASVISACASLSAIKV 271
Query: 57 AEELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+E++ V D + SNA + Y K R +EA IF++M ++V+A SM+ GY
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 331
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
AR +F KM E+NVV+W A++ GY + E+ LF ++R + +
Sbjct: 332 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 391
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDY------DIILGNSIITMYGRLGFMDEANKVFS 227
+ +AC G+Q H V + GF + DI +GNS+I MY + G ++E VF
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEK 283
M +RD VSWN++I G+ NG EA LF M D ++ +++ G +E+
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 284 SIELFNMM-------PEKDDVTWTAII---SGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
F+ M P +D T + +GF+ EEA EM ++P+ +
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFL-----EEAKSMIEEM---PMQPDSVI 563
Query: 334 LSSVLSASAATATLNQGSQI 353
S+L+A + G +
Sbjct: 564 WGSLLAACKVHRNITLGKYV 583
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 192/593 (32%), Positives = 334/593 (56%), Gaps = 48/593 (8%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCS-NALISGY 81
+ A +IF + R++ S+ M++ + R G A+ ++ MP RW S+ S AL+S +
Sbjct: 8 VERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMP-RW--SLGSWTALLSAF 64
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
G EEA +F+ M E+D++AW M+ + +A+ FD+MPE+++VAWTAM+
Sbjct: 65 ALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLA 124
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
+ E+ + F M +
Sbjct: 125 ANAERGQMENARETFDQMP---------------------------------------ER 145
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++ S+++ YGR G + A +VF M + + V+W ++++GY +G++ A R F+ MP
Sbjct: 146 NLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMP 205
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+D ++WT M++ ++ G+L + E+F MPE+D ++W +++ V N+ EE+ F
Sbjct: 206 ERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDR 265
Query: 322 MLR-----KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
M R K + PN++T ++L A + L +G +IHA V + ++D+ + N+LV+ Y
Sbjct: 266 MPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFY 325
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+CG + DA +F + R+++S++SMIS FAQ G +EA+ L+ +M EG +P+ I F+
Sbjct: 326 GRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFI 385
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
SVL AC++ G+VE +F+S+ +EP EHYACMVD+LGRAG L +A DL+ M F
Sbjct: 386 SVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPF 445
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
P P ++ +L A + + +++ + AA+ + EL+P++++PY+ L+++YS + +D R+
Sbjct: 446 HPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARI 505
Query: 557 RMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
R + + I+K PGCSWI + D+VH F+AG K EI +Q + + KE
Sbjct: 506 RKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKE 558
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 207/439 (47%), Gaps = 46/439 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R ++ M+T L + +I +A F MP R+ V++ AM+ RG A E
Sbjct: 80 MQERDLIAWTIMLTVLATFS-NIEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARET 138
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ +L+S Y + G + A R+F++M E ++VAW +M+ GY G V+
Sbjct: 139 FDQMPE--RNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVR 196
Query: 121 AREIFDKMPEKNVVAWTAMVDGY-------------------------------MKVDCF 149
A+ FD MPE++++AWTAM+ Y ++ D
Sbjct: 197 AKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLL 256
Query: 150 EDGFDLFLSMRR-----GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
E+ +LF M R GM N +T L +AC EG ++H V+ GFD D++
Sbjct: 257 EESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLV 316
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK- 263
+ N+++ YGR G + +A VF M +RD +SW+S+IS + G ++EA L+ RM +
Sbjct: 317 VSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEG 376
Query: 264 ---DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT-AIISGFVNNEQYEEAFRWF 319
D + + +++ S+ G +E S + F + V T + V+ R
Sbjct: 377 TLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDA 436
Query: 320 IEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
++LR P L ++LSA + +G V +++ E+ S +L ++YS
Sbjct: 437 EDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENS-SPYITLANIYSA 495
Query: 379 CGNVVDAYRIFTNIDERNI 397
DA RI ++ER I
Sbjct: 496 AKRPKDAARIRKLMEERGI 514
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 163/347 (46%), Gaps = 70/347 (20%)
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP---------- 261
M+GRLG ++ A ++F ++ RD+ SW ++S Y +G++ A +F+RMP
Sbjct: 1 MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTAL 60
Query: 262 ---------------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+D ++WT M+T ++ N+E + F+ MPE+D V WT
Sbjct: 61 LSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWT 120
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+++ Q E A F +M + N + +S+LSA + + ++ + +
Sbjct: 121 AMLAANAERGQMENARETFDQMPER----NLFSWTSLLSAYGRSGDVKAAGRVFDSMPEW 176
Query: 361 NM---------------------------ESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
N+ E D+ +++S Y+ G++ IF +
Sbjct: 177 NLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMP 236
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMK-----DEGLVPNQITFLSVLSACNHVGLV 448
ER+++S+ +M++ +N L EE+ LF +M +G+ PN++TF+++L AC+ +G +
Sbjct: 237 ERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGAL 296
Query: 449 EEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
EG I+ + ++ + + +V+ GR G+L +A + + M
Sbjct: 297 AEGRKIHAAVAERGFDTDLVVSN--ALVNFYGRCGALGDAKIVFDGM 341
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 209/613 (34%), Positives = 327/613 (53%), Gaps = 47/613 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ +A F M RN+VS+ A I G V+ + EL+V M R V A S +
Sbjct: 186 SLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQ-RLGLGVSQPAYASVF 244
Query: 82 LKVG--RCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
C AR A K D V ++VD Y K +++AR F +P V
Sbjct: 245 RSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQ 304
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
A AM+ G ++ + LF M R G+ F+ ++L+ +F AC Y +G+QVH L
Sbjct: 305 ACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLA 364
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ GFD D+ + N+I+ +YG+ + EA VF M +RD+VSWN++I+ N E+
Sbjct: 365 IKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTI 424
Query: 255 RLFERM------P---------------------------------GKDFVSWTTMITGF 275
M P G D +T++ +
Sbjct: 425 AYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMY 484
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
G + ++ +L + + ++ V+W +IISGF N+Q EEA ++F EML V+P+ T +
Sbjct: 485 CKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYA 544
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VL A AT+ G QIH ++K M D I ++LV +Y+KCGN+ D+ +F +
Sbjct: 545 TVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKL 604
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ VS+N+MI G+A +G G EAL +F +M+ +VPN TF++VL AC+HVGL+++G YF
Sbjct: 605 DFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYF 664
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
M + Y +EP EH+ACMVDILGR+ EA+ I SM E +W LL + +
Sbjct: 665 YLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQD 724
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+++A+ AA +++ L+PD ++ Y++LS++Y+ GK D +R R + R++K PGCSWI
Sbjct: 725 VEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIE 784
Query: 576 LKDKVHLFLAGRK 588
++ ++H FLAG K
Sbjct: 785 VQSEMHGFLAGDK 797
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 218/457 (47%), Gaps = 42/457 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN L+ Y + G A +F+ M +D V+W +M+ Y G A +F MP+ +V
Sbjct: 42 SNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDV 101
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W A++ GY + F D L + M R G+A + TL +L +ACG GVQ+H +
Sbjct: 102 VSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAV 161
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G + D+ G++++ MYG+ +++A + F M +R++VSW + I+G V N +
Sbjct: 162 AVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRG 221
Query: 254 YRLFERMP---------------------------------------GKDFVSWTTMITG 274
LF +M D V T ++
Sbjct: 222 LELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDV 281
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ +L + F +P A++ G V EA + F M R + + ++L
Sbjct: 282 YAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSL 341
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S V SA A QG Q+H +K + DV ++N+++ LY KC +V+AY +F +++
Sbjct: 342 SGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ 401
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FI 453
R+ VS+N++I+ QN E+ + +M G+ P+ T+ SVL AC + +E G +
Sbjct: 402 RDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVV 461
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+ K++K+ ++ + +VD+ + G + EA L
Sbjct: 462 HGKAIKSGLGLDAFVS--STVVDMYCKCGMITEAQKL 496
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 231/496 (46%), Gaps = 46/496 (9%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N M+TA + A +F MP + VS+ A+++G+ +RGMF ++ L
Sbjct: 65 MPHRDTVSWNTMLTAYAHAG-DTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123
Query: 61 YVNMPARW--RDSVCSNALISGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCK 114
V M R D L+ + +I V E DV A ++VD Y K
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
+ +A F M E+N V+W A + G ++ + + G +LF+ M+R G+ + +
Sbjct: 184 CRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASV 243
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
F +C Q+H + F D ++G +I+ +Y + + +A + F +
Sbjct: 244 FRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTV 303
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSS-KGNLE------- 282
+ N+++ G V G EA +LF+ M G D VS + + + + KG L+
Sbjct: 304 QACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCL 363
Query: 283 ---------------------------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
++ +F M ++D V+W AII+ NE YE+
Sbjct: 364 AIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDT 423
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+ EMLR + P+ T SVL A A +L GS +H +K + D + +++V +
Sbjct: 424 IAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDM 483
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y KCG + +A ++ I + +VS+NS+ISGF+ N EEA F +M D G+ P+ T+
Sbjct: 484 YCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTY 543
Query: 436 LSVLSACNHVGLVEEG 451
+VL C ++ +E G
Sbjct: 544 ATVLDTCANLATIELG 559
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 159/357 (44%), Gaps = 36/357 (10%)
Query: 168 SITLTILFEACGRFFR--YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ T + L++ C R G H + GF + N ++ MY R G A V
Sbjct: 2 TATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGV 61
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSI 285
F +M RD VSWN++++ Y H G+ A LF MP D VSW +++G+ +G S+
Sbjct: 62 FDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSV 121
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
L +EM R+ V P++ TL+ +L A
Sbjct: 122 GL-------------------------------SVEMARRGVAPDRTTLAVLLKACGGLE 150
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
L G QIHA VK +E DV ++LV +Y KC ++ DA R F + ERN VS+ + I+
Sbjct: 151 DLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIA 210
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNI 464
G QN L LF +M+ GL +Q + SV +C + + ++ ++K ++
Sbjct: 211 GCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSA 270
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
+ +VD+ +A SL +A S+ ++G RT L + +L
Sbjct: 271 DRVVG--TAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQL 325
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 189/542 (34%), Positives = 306/542 (56%), Gaps = 30/542 (5%)
Query: 74 SNALISGYLKV---GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
SNALI+ Y+K G +A ++ + M EKD + W ++V G+ +KG V AR F+++
Sbjct: 199 SNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDG 258
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
+ V W AM+ GY++ + F+LF M + + T T L AC + G V
Sbjct: 259 EFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSV 318
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG R D F+ EA + N+L++ Y +G+I
Sbjct: 319 HGQFIRLQPD-----------------FVPEAALPVN----------NALVTLYSKSGKI 351
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
A ++F+ M KD VSW T+++G+ G L+ + +F MP K +++W ++SG+V+
Sbjct: 352 AVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGG 411
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
E+A + F +M +DV+P T + ++A L G Q+HAH+V+ E+ S N
Sbjct: 412 LAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGN 471
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+++Y++CG V DA +F + + VS+N+MIS Q+G G EAL LF +M +G+ P
Sbjct: 472 ALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYP 531
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
++I+FL++L+ACNH GLV++GF YF+SM+ + I PG +HYA ++D+LGRAG + EA DL
Sbjct: 532 DRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDL 591
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I +M FEP P +W A+L R + +++L AA L ++ P+ Y++LS+ YS G+
Sbjct: 592 IKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRW 651
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEF 610
D RVR + + ++K PGCSWI + +KVH+FL G D E+ L+ + ++
Sbjct: 652 VDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKL 711
Query: 611 DW 612
+
Sbjct: 712 GY 713
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 189/398 (47%), Gaps = 43/398 (10%)
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMP--EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
VA S+V Y GR+ ++ FD +P ++ V AM+ + + +F S+
Sbjct: 90 VAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLL 149
Query: 161 RG--GMAFNSITLTILFEACGRF--FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
+ + + T L A G+ Q+H V + G + + N++I +Y
Sbjct: 150 ASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALY--- 206
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFS 276
K DA G +A ++ + MP KD ++WTT++ G
Sbjct: 207 -------------MKCDA------------PGVTRDARKVLDEMPEKDELTWTTIVVGHV 241
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
KG++ + F + + DV W A+ISG+V + EAF F M+ K + P++ T +S
Sbjct: 242 RKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTS 301
Query: 337 VLSASAATATLNQGSQIHAHVVKMN----MESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
+LSA A G +H +++ E+ + + N+LV+LYSK G + A +IF ++
Sbjct: 302 LLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSM 361
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+++VS+N+++SG+ ++G + A +F++M + ++++++ ++S H GL E+
Sbjct: 362 TLKDVVSWNTILSGYIESGCLDNAARIFKEMPYK----SELSWMVMVSGYVHGGLAEDAL 417
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
F M++ +++P YA V G G+L L
Sbjct: 418 KLFNQMRS-EDVKPCDYTYAGAVAACGELGALKHGKQL 454
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 193/418 (46%), Gaps = 44/418 (10%)
Query: 9 YNAMITALINNN-CSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYVN 63
+NAMI+ + + C+ EAFE+F M + + ++ ++++ G F + ++
Sbjct: 264 WNAMISGYVQSGMCA--EAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQ 321
Query: 64 MPARWRDSV------CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
D V +NAL++ Y K G+ A +IF++M KDVV+W +++ GY + G
Sbjct: 322 FIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGC 381
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ A IF +MP K+ ++W MV GY+ ED LF MR + T A
Sbjct: 382 LDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAA 441
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
CG + G Q+H + + GF+ GN+++TMY R G + +A VF +M D+VSW
Sbjct: 442 CGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSW 501
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
N++IS +G EA LF++M + D +S+ T++T + G ++ + F M E
Sbjct: 502 NAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESM-E 560
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR--------------PNQLTLSSVLS 339
+D I G E+ + I++L + R P ++LS
Sbjct: 561 RD----FGISPG-------EDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILS 609
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+ G+ + KM E D L + YS G VDA R+ + +R +
Sbjct: 610 GCRINGDMELGAYAADQLFKMVPEHD-GTYILLSNTYSAAGRWVDAARVRKLMRDRGV 666
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 212/653 (32%), Positives = 326/653 (49%), Gaps = 81/653 (12%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ + ++F MP RN ++ +++TG + G EA+ L+ +MP RD N+++SG+
Sbjct: 70 SLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPE--RDQCTWNSMVSGF 127
Query: 82 LKVGRCEEAARIFEAMVEK----------------------------------------D 101
+ RCEEA F AM+ K D
Sbjct: 128 AQHDRCEEALYYF-AMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSD 186
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
V ++VD Y K G V +A+++FD+M ++NVV+W +++ Y + + +F M
Sbjct: 187 VYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLE 246
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMD 220
+ + +TL + AC + G +VH V + DIIL N+ + MY + +
Sbjct: 247 SWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIK 306
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
EA +F M R+ ++ S++SGY + A +F +M ++ VSW +I G++ G
Sbjct: 307 EARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
E+++ LF ++ R+ V P T +++L A
Sbjct: 367 NEEALSLFCLLK-------------------------------RESVCPTHYTFANILKA 395
Query: 341 SAATATLNQGSQIHAHVVKMNM------ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
A A L+ G Q H HV+K E D+ + NSL+ +Y KCG V + Y +F + E
Sbjct: 396 CADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 455
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
R+ VS+N+MI GFAQNG G EAL LFR+M D G P+ IT + VLSAC H G VEEG Y
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F SM + + P +HY CMVD+LGRAG L EA +I M +P +WG+LL A + H
Sbjct: 516 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHR 575
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
N+ L K A+ L E+E ++ PYV+LS++Y+ +GK D VR + + + K PGCSWI
Sbjct: 576 NITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWI 635
Query: 575 ILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLERDWS 627
+ H+F+ KS K+I L + ++ SL E D+S
Sbjct: 636 KIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEMRQKQDHAETGSLSSEEMDYS 688
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 223/645 (34%), Positives = 343/645 (53%), Gaps = 49/645 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARW 68
NAM++ L+ + A+ +FA MP R+ S+ M+ G+ + G+ EA +LY M A
Sbjct: 133 NAMLSMLVRFG-ETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGV 191
Query: 69 RDSV----CSNALISGY--LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
R V C G ++GR E A + ++V +++ Y K G V+ AR
Sbjct: 192 RPDVYTFPCVLRSCGGVPDWRMGR-EVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR 250
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
++FD M + ++W AM+ G+ + G +LFL+M + + N +T+T + A G
Sbjct: 251 KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLS 310
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
++HGL + GF D+ NS+I MY LG M +A VFS M RDA+SW ++IS
Sbjct: 311 DITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMIS 370
Query: 243 GYVHNG-----------------------------------EIEEAYRLFERMPGKDFVS 267
GY NG ++ +L E K F+S
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMS 430
Query: 268 WTTMITG----FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ + ++ ++K+IE+F MPEKD V+W+++I+GF N + EA +F ML
Sbjct: 431 YVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHML 490
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
DV+PN +T + L+A AAT L G +IHAHV++ + + + N+L+ LY KCG
Sbjct: 491 -ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTG 549
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A+ F +++VS+N MI+GF +G GE AL+ F +M G P+++TF+++L AC+
Sbjct: 550 YAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACS 609
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
G+V EG+ F SM Y+I P +HYACMVD+L R G L EA + IN M P VW
Sbjct: 610 RGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVW 669
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
GALL R H +++L +LAA++++ELEP+ A +V+L DLY+ G RVR + K
Sbjct: 670 GALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREK 729
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+ GCSW+ +K VH FL +S ++EI L+ I + K
Sbjct: 730 GLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMK 774
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 136/274 (49%), Gaps = 39/274 (14%)
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ + LGN++++M R G A +VF+ M +RD SWN ++ GY G +EEA L+ RM
Sbjct: 127 FGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRM 186
Query: 261 ------P---------------------------------GKDFVSWTTMITGFSSKGNL 281
P ++ ++T ++ G++
Sbjct: 187 MWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDV 246
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ ++F+ M D ++W A+I+G N + F+ ML+ +V+PN +T++SV AS
Sbjct: 247 VAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVAS 306
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ + ++H VK +DV+ NSL+ +Y+ G + A +F+ +D R+ +S+
Sbjct: 307 GLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWT 366
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
+MISG+ +NG ++AL ++ M+ + P+ IT
Sbjct: 367 AMISGYEKNGFPDKALEVYALMEVNNVSPDDITI 400
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+ G + AH + + + N+++S+ + G A+R+F + ER++ S+N M+
Sbjct: 109 AVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVG 168
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
G+ + GL EEAL+L+ +M G+ P+ TF VL +C V
Sbjct: 169 GYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGV 208
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/539 (36%), Positives = 308/539 (57%), Gaps = 41/539 (7%)
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK-KGRVI 119
Y+ P+ N +I+ ++ G + A R+F M K+ + W S++ G K R++
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EA ++FD++PE + ++ M+ Y++ + FE
Sbjct: 111 EAHQLFDEIPEPDTFSYNIMLSCYVR--------------------------NVNFEKAQ 144
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
FF R F D N++IT Y R G M++A ++F M +++ VSWN+
Sbjct: 145 SFF------------DRMPFK-DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF-NMMPEKDDVT 298
+ISGY+ G++E+A F+ P + V+WT MITG+ +E + +F +M K+ VT
Sbjct: 192 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISG+V N + E+ + F ML + +RPN LSS L + + L G QIH V
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K + +DV+ SL+S+Y KCG + DA+++F + ++++V++N+MISG+AQ+G ++AL
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LFR+M D + P+ ITF++VL ACNH GLV G YF+SM Y +EP P+HY CMVD+L
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L EA+ LI SM F P V+G LLGA R H N++LA+ AA+ L++L +A YV
Sbjct: 432 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 491
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
L+++Y+ + D RVR + K + K PG SWI +++KVH F + + +L I
Sbjct: 492 QLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 202/441 (45%), Gaps = 51/441 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + + ++N+++ + + + EA ++F +P + SY M++ +VR F +A+
Sbjct: 87 MRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSF 146
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP ++D+ N +I+GY + G E+A +F +M+EK+ V+W +M+ GY + G + +
Sbjct: 147 FDRMP--FKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEK 204
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCF------------------------------- 149
A F P + VVAWTAM+ GYMK
Sbjct: 205 ASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSR 264
Query: 150 -EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
EDG LF +M G+ NS L+ C + G Q+H +VS+ D+ S
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS 324
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----D 264
+I+MY + G + +A K+F +M K+D V+WN++ISGY +G ++A LF M D
Sbjct: 325 LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 384
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMM-------PEKDDVTWTAIISGFVNNEQYEEAFR 317
++++ ++ + G + + F M P+ D +T ++ + EEA +
Sbjct: 385 WITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH--YTCMVDLLGRAGKLEEALK 442
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
M RP+ ++L A + ++++N ++ L ++Y+
Sbjct: 443 LIRSM---PFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQ-LANIYA 498
Query: 378 KCGNVVDAYRIFTNIDERNIV 398
D R+ + E N+V
Sbjct: 499 SKNRWEDVARVRKRMKESNVV 519
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 215/629 (34%), Positives = 338/629 (53%), Gaps = 63/629 (10%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY------------VNMPARWRDSVC 73
A+ +F M R+ S+ ++ G+ + G F EA LY P+ R
Sbjct: 88 AWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAG 147
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+ L+ G E A + + DV +++ Y K G V+ AR +FDKMP ++
Sbjct: 148 AMDLVRGR------EVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDR 201
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++W AM+ GY + D +G +LF MR + + +T+T + AC R G Q+H
Sbjct: 202 ISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSY 261
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN---GEI 250
V R +D +I + NS+I MY +G EA VFS M RD VSW ++ISG V N +
Sbjct: 262 VVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKA 321
Query: 251 EEAYRLFE---RMPGKDFVSWTTMITGFSSKGNL-------------------------- 281
E Y+ E MP D V+ ++++ +S G L
Sbjct: 322 LETYKTMEITGTMP--DEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLI 379
Query: 282 ---------EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
EK++E+F+ +P+KD ++WT++I+G N + EA +F +M+ K +PN +
Sbjct: 380 DMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSV 438
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
TL S LSA A L G +IHAH +K M D + N+++ LY +CG + A F N+
Sbjct: 439 TLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NL 497
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+E+++ ++N +++G+AQ G G + LF++M + + P+ +TF+S+L AC+ G+V EG
Sbjct: 498 NEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGL 557
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
YF+ MK Y+I P +HYAC+VD+LGRAG L EA + I M +P P +WGALL A R
Sbjct: 558 EYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRI 617
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H ++ L +LAAQH+ + + +S Y++L +LY+ GK + +VR K + + PGCS
Sbjct: 618 HRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCS 677
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
W+ +K KVH FL+G ++EI V L+
Sbjct: 678 WVEVKGKVHAFLSGDNFHPQMQEINVVLE 706
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 226/476 (47%), Gaps = 57/476 (11%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ + + G V A +F +M E+++ +W +V GY K F++ L+ + G+
Sbjct: 74 ALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRP 133
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T + +C G +VH V RF FD D+ + N++ITMY + G + A +F
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITG-------- 274
M RD +SWN++ISGY N E E LF RM D ++ T++I+
Sbjct: 194 DKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDER 253
Query: 275 ---------------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
+ S G+ +++ +F+ M +D V+WT IISG V
Sbjct: 254 LGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCV 313
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
+N ++A + M P+++T++SVLSA A+ L+ G ++H + V
Sbjct: 314 DNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVV 373
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ NSL+ +YSKC + A IF I +++++S+ S+I+G N EAL FRKM +
Sbjct: 374 VANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS 433
Query: 428 LVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIE---PGPEHYACMVDILGRAGS 483
PN +T +S LSAC VG + G I+ ++K + P ++D+ R G
Sbjct: 434 -KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNA-----ILDLYVRCGR 487
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPDSAT 535
+ A++ N E G W LL G+ + ++L K + E+ PD T
Sbjct: 488 MRTALNQFN--LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVES--EINPDDVT 539
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 162/343 (47%), Gaps = 40/343 (11%)
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV-HGLVSRFGFDYDIILGN 207
E SM+ + L C Y EG V ++S + LGN
Sbjct: 14 LEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGN 73
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------- 260
++++M+ R G + A VF M +RD SWN L+ GY G +EA L+ R+
Sbjct: 74 ALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRP 133
Query: 261 -------------PGKDFVSW-------------------TTMITGFSSKGNLEKSIELF 288
D V +IT + G++ + LF
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ MP +D ++W A+ISG+ N++ E F M + P+ +T++SV+SA
Sbjct: 194 DKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDER 253
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G+Q+H++VV+ + ++S+ NSL+ +Y G+ +A +F+ ++ R++VS+ ++ISG
Sbjct: 254 LGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCV 313
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
N L ++AL ++ M+ G +P+++T SVLSAC +G ++ G
Sbjct: 314 DNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMG 356
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 18/257 (7%)
Query: 1 MADRTSAS-YNAMITALIN--NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYE 56
+A+RT Y + +LI+ + C I +A EIF +P ++ +S+ ++I G +E
Sbjct: 362 LAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFE 421
Query: 57 AEELYVNMPARWR-DSVCSNALISGYLKVGR--C--EEAARIFEAMVEKDVVAWGSMVDG 111
A + M + + +SV + +S +VG C E A +A + D +++D
Sbjct: 422 ALIFFRKMILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDL 481
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y + GR+ A F+ + EK+V AW ++ GY + +LF M + + +T
Sbjct: 482 YVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTF 540
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG----NSIITMYGRLGFMDEANKVFS 227
L AC R EG++ R +Y I ++ + GR G ++EA++
Sbjct: 541 ISLLCACSRSGMVTEGLE---YFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIE 597
Query: 228 MMS-KRDAVSWNSLISG 243
M K D W +L++
Sbjct: 598 RMPIKPDPAIWGALLNA 614
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/568 (32%), Positives = 322/568 (56%), Gaps = 7/568 (1%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW---RDSVCSNALIS 79
+ ++ ++ + + +Y ++ VR +A+ L +M DS N L+
Sbjct: 7 LRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLH 66
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
Y K G+ +A +F+ M+++D +W +++ Y K G + + FD+MP ++ V++
Sbjct: 67 LYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTT 126
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ G+ C ++ +LF M+R G T+ + A + R G Q+HG + F
Sbjct: 127 IAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNF 186
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE- 258
++ + N++ MY + G +++A +F ++K++ VSWN +ISGY NG+ E+ L
Sbjct: 187 LGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQ 246
Query: 259 -RMPGK--DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
R+ G D V+ +T+I + G ++++ +F+ EKD V WTA++ G+ N + E+A
Sbjct: 247 MRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDA 306
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F EML + + P+ TLSSV+S+ A A+L+ G +H + + +++ + ++L+ +
Sbjct: 307 LLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDM 366
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
YSKCG + DA +F + RN+VS+N+MI G AQNG ++AL LF M + P+ +TF
Sbjct: 367 YSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTF 426
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+ +LSAC H +E+G YF S+ + + P +HYACMV++LGR G + +A+ LI +M
Sbjct: 427 IGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMA 486
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNR 555
+P +W LL T ++ A++AA+HL EL+P A PY++LS++Y+ +G+ +D
Sbjct: 487 HDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVAS 546
Query: 556 VRMKKKLKRIRKSPGCSWIILKDKVHLF 583
VR K K ++K G SWI + ++VH F
Sbjct: 547 VRNLMKSKNVKKFAGFSWIEIDNEVHRF 574
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 193/461 (41%), Gaps = 110/461 (23%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+NA+++A + SI F MP R++VSY I GF E+ EL
Sbjct: 84 MLKRDXFSWNALLSAYAKSG-SIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLEL 142
Query: 61 Y------------------VNMPARWRD---------SVCS----------NALISGYLK 83
+ +N A+ D S+ NAL Y K
Sbjct: 143 FKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAK 202
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDG-------------------------------- 111
G E+A +F+ + +K++V+W M+ G
Sbjct: 203 CGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI 262
Query: 112 ---YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
YC+ GRV EAR +F + EK++V WTAM+ GY K ED LF M + +S
Sbjct: 263 IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDS 322
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
TL+ + +C + G VHG G + ++++ +++I MY + GF+D+A VF++
Sbjct: 323 YTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNL 382
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
M R+ VSWN++I G NG ++A LFE M + F
Sbjct: 383 MPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKF----------------------- 419
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL- 347
+ D+VT+ I+S ++ E+ +F D NQ ++ L A L
Sbjct: 420 ----KPDNVTFIGILSACLHCNWIEQGQEYF------DSISNQHGMTPTLDHYACMVNLL 469
Query: 348 ---NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ Q A + M + D I ++L+S+ S G++V+A
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNA 510
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/568 (32%), Positives = 323/568 (56%), Gaps = 7/568 (1%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW---RDSVCSNALIS 79
+ ++ ++ + + +Y ++ VR +A+ L +M DS N L+
Sbjct: 7 LRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLH 66
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
Y K G+ +A +F+ M+++D+ +W +++ Y K G + + FD+MP ++ V++
Sbjct: 67 LYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTT 126
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ G+ C ++ +LF M+R G T+ + A + R G Q+HG + F
Sbjct: 127 IAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNF 186
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE- 258
++ + N++ MY + G +++A +F ++K++ VSWN +ISGY NG+ E+ L
Sbjct: 187 LGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQ 246
Query: 259 -RMPGK--DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
R+ G D V+ +T+I + G ++++ +F+ EKD V WTA++ G+ N + E+A
Sbjct: 247 MRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDA 306
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F EML + + P+ TLSSV+S+ A A+L+ G +H + + +++ + ++L+ +
Sbjct: 307 LLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDM 366
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
YSKCG + DA +F + RN+VS+N+MI G AQNG ++AL LF M + P+ +TF
Sbjct: 367 YSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTF 426
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+ +LSAC H +E+G YF S+ + + P +HYACMV++LGR G + +A+ LI +M
Sbjct: 427 IGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMA 486
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNR 555
+P +W LL T ++ A++AA+HL EL+P A PY++LS++Y+ +G+ +D
Sbjct: 487 HDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVAS 546
Query: 556 VRMKKKLKRIRKSPGCSWIILKDKVHLF 583
VR K K ++K G SWI + ++VH F
Sbjct: 547 VRNLMKSKNVKKFAGFSWIEIDNEVHRF 574
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 193/461 (41%), Gaps = 110/461 (23%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+NA+++A + SI F MP R++VSY I GF E+ EL
Sbjct: 84 MLKRDIFSWNALLSAYAKSG-SIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLEL 142
Query: 61 Y------------------VNMPARWRD---------SVCS----------NALISGYLK 83
+ +N A+ D S+ NAL Y K
Sbjct: 143 FKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAK 202
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDG-------------------------------- 111
G E+A +F+ + +K++V+W M+ G
Sbjct: 203 CGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI 262
Query: 112 ---YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
YC+ GRV EAR +F + EK++V WTAM+ GY K ED LF M + +S
Sbjct: 263 IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDS 322
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
TL+ + +C + G VHG G + ++++ +++I MY + GF+D+A VF++
Sbjct: 323 YTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNL 382
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
M R+ VSWN++I G NG ++A LFE M + F
Sbjct: 383 MPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKF----------------------- 419
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL- 347
+ D+VT+ I+S ++ E+ +F D NQ ++ L A L
Sbjct: 420 ----KPDNVTFIGILSACLHCNWIEQGQEYF------DSITNQHGMTPTLDHYACMVNLL 469
Query: 348 ---NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ Q A + M + D I ++L+S+ S G++V+A
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNA 510
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 218/651 (33%), Positives = 342/651 (52%), Gaps = 76/651 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM-----PMRNAVSYAAMITGFVRRGMFY 55
M +R S ++N++ITA N +YEA E M M N VS++A+I GF + G
Sbjct: 221 MPERDSVTWNSVITACAANG-MVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDE 279
Query: 56 EAEELYVNM----------------PARWR---------------------DSVCSNALI 78
EA E+ M PA R + V NAL+
Sbjct: 280 EAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALV 339
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP----EKNVV 134
Y + G AA+IF K+V++ +M+ GYC+ G V +A+E+FD M E+ ++
Sbjct: 340 DVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLI 399
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+W +++ GY++ F++ F +F +M G+ +S TL + AC R+G ++H
Sbjct: 400 SWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQ 459
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
G D +G +++ MY + + A F + ++D +WN+LISGY + +IE
Sbjct: 460 AIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERI 519
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
L E+M G + + TW +I++G V N Q +
Sbjct: 520 QYLLEKMKGDGY---------------------------HPNIYTWNSILAGLVENRQLD 552
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+ F EM +RP+ T+ +L A + ATL +G Q HAH +K ++DV I +LV
Sbjct: 553 LTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALV 612
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y+KCG++ A + I N+VS+N+M++ A +G GEE ++LF+ M G +P+ +
Sbjct: 613 DMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHV 672
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
TFLSVLS+C HVG VE G +F M YN++P +HY MVD+L R+G L EA +LI
Sbjct: 673 TFLSVLSSCVHVGSVETGCEFFDLMG-YYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKK 731
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
M E +WGALLG TH N++L ++AA+ L+ELEP+++ YV+L++L++ + D
Sbjct: 732 MPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDL 791
Query: 554 NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
RVR K + + KSPGCSWI K+++H FLA +S +EI TL ++
Sbjct: 792 ARVRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYLA 842
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 227/468 (48%), Gaps = 83/468 (17%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--------------------------- 61
+F TMPMRN S+ A+++ ++ G+F EA L+
Sbjct: 116 LFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGS 175
Query: 62 VNMPARWRDSV----------CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
V + + V SNALI Y K G ++A ++ M E+D V W S++
Sbjct: 176 VELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITA 235
Query: 112 YCKKGRVIEAREIFDKMPE-----KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
G V EA E +KM NVV+W+A++ G+ + E+ ++ M+ G+
Sbjct: 236 CAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVP 295
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
N+ TL + AC R R G Q+HG ++R F + ++ N+++ +Y R G M A K+F
Sbjct: 296 NAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIF 355
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLE 282
S ++ +S N++I GY +G++ +A LF+ M + +SW +
Sbjct: 356 LKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNS------------ 403
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSAS 341
IISG+V N ++EAF F ML ++ + P+ TL SVL+A
Sbjct: 404 -------------------IISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTAC 444
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
A T +L QG +IHA + ++SD + +LV +YSKC ++ A F + E+++ ++N
Sbjct: 445 ADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWN 504
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
++ISG+ ++ E L KMK +G PN T+ S+L+ GLVE
Sbjct: 505 ALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILA-----GLVE 547
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 211/427 (49%), Gaps = 43/427 (10%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y + G + +A +F+ MP +N+ +W A++ Y+ FE+ F LF ++ G+ +
Sbjct: 104 YARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVF 163
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
++F+AC G Q+HGLV +F F +I + N++I MYG+ G +D+A KV M +
Sbjct: 164 PLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPE 223
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF-----VSWTTMITGFSSKGNLEKSIE 286
RD+V+WNS+I+ NG + EA E+M D+ VSW+ +I GF+ G E++IE
Sbjct: 224 RDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIE 283
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+ FR +E L PN TL+ VL A A
Sbjct: 284 ML---------------------------FRMQVEGL----VPNAQTLAGVLPACARLQR 312
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L+ G Q+H ++ + + S+ + N+LV +Y +CG++ A +IF +N++S N+MI G
Sbjct: 313 LDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVG 372
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+ ++G +A LF M G+ I++ S++S + +E F F++M IEP
Sbjct: 373 YCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEP 432
Query: 467 -----GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
G AC I R G A ++ + + V GAL+ +L A++
Sbjct: 433 DSFTLGSVLTACADTISLRQGKEIHAQAIVKGL--QSDTFVGGALVEMYSKCQDLTAAQV 490
Query: 522 AAQHLME 528
A +ME
Sbjct: 491 AFDEVME 497
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 37/255 (14%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T ++ ++ G L+ + LF MP ++ +W AI+S ++++ +EEAF F + V
Sbjct: 98 TKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVE 157
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ V A + ++ G Q+H V+K ++ + N+L+ +Y KCG++ DA ++
Sbjct: 158 LDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKV 217
Query: 389 FTNIDER------------------------------------NIVSYNSMISGFAQNGL 412
+ ER N+VS++++I GFAQNG
Sbjct: 218 LVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGY 277
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
EEA+ + +M+ EGLVPN T VL AC + ++ G T ++ P
Sbjct: 278 DEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLG-KQLHGYITRHDFISNPVVVN 336
Query: 473 CMVDILGRAGSLAEA 487
+VD+ R G + A
Sbjct: 337 ALVDVYRRCGDMGGA 351
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G Q+HAH +K ++D I L+ +Y++CG + DA +F + RN+ S+ +++S +
Sbjct: 78 GKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLD 137
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG------FIYFKSMKTLYN 463
+GL EEA LF+ ++ +G+ + F V AC+ +G VE G I F+ +Y
Sbjct: 138 HGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYV 197
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
++D+ G+ GSL +A ++ M E W +++ A
Sbjct: 198 SNA-------LIDMYGKCGSLDDAKKVLVKMP-ERDSVTWNSVITA 235
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 348/619 (56%), Gaps = 26/619 (4%)
Query: 20 NCSIYEAFEIFATMPMRNAVSYAAMITG-----FVRRGMFYEAEELYVNMPARWRDSVCS 74
NC E ++ ++ +R +++ ++ + + G A + NM +RD V
Sbjct: 197 NCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENM--DYRDRVSW 254
Query: 75 NALISGYLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
N++I+GY + G E++ ++FE M +E +V W +++ Y + G+ +A E+ KM
Sbjct: 255 NSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMES 314
Query: 131 ----KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+V WT+M+ G+ + + +LF M G+ N +T+T AC ++
Sbjct: 315 FRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKK 374
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G+++H + + G D+++GNS+I MY + G +++A +VF M+ K+D +WNS+I GY
Sbjct: 375 GMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQ 434
Query: 247 NGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPE-----KDDV 297
G +AY LF +M D V+W MI+G+ G+ +++++LF+ M + +D
Sbjct: 435 AGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTA 494
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W ++I+G++ N +A F +M +RPN +T+ S+L A A + +IH +
Sbjct: 495 SWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCI 554
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
++ N+ S++S+ N L+ Y+K GN+V A IF I ++I+S+NS+I+G+ +G + AL
Sbjct: 555 LRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSAL 614
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
+LF +M G+ P++ TFLS++ A + G+V++G F SM Y I PG EH++ M+D+
Sbjct: 615 DLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDL 674
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGR+G L EAI+ I M EP +W ALL A + H N+ LA A + L+ELEP + + +
Sbjct: 675 LGRSGKLGEAIEFIEDMAIEPDSCIWAALLTASKIHGNIGLAIRAGECLLELEPSNFSIH 734
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
+ +Y++ GK D +++R +K ++ GCSWI K+ VH F+A +S +
Sbjct: 735 QQILQMYALSGKFEDVSKLRKSEKRSETKQPLGCSWIEAKNIVHTFVADDRSRPYFDFLH 794
Query: 598 VTLQTISKGTKEFDWPKHD 616
++ +++ K D +HD
Sbjct: 795 SWIENVARKVKAPD--QHD 811
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 203/362 (56%), Gaps = 12/362 (3%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+V Y K G + EAR++F +M E+N+ AW+AM+ Y + + + F M G+ +
Sbjct: 125 LVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPD 184
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
L + +ACG G +H LV R G +++I + NSI+ +Y + G + A + F
Sbjct: 185 EFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFE 244
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSWTTMITGFSSKGNL 281
M RD VSWNS+I+GY GE+E++++LFE+M PG V+W +I +S G
Sbjct: 245 NMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPG--LVTWNILINSYSQSGKC 302
Query: 282 EKSIELFNMMPE----KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
+ ++EL M D TWT++ISGF N + +A F EML + PN +T++S
Sbjct: 303 DDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSG 362
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+SA A+ L +G ++H+ VK+ D+ + NSL+ +YSK G + DA R+F I ++++
Sbjct: 363 ISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDV 422
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
++NSMI G+ Q G +A +LF KM + + PN +T+ +++S G ++ F
Sbjct: 423 YTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHR 482
Query: 458 MK 459
M+
Sbjct: 483 ME 484
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 124/226 (54%), Gaps = 1/226 (0%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T +++ ++ G+L ++ ++F M E++ W+A+I + + + E + F M+ +
Sbjct: 123 TKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIV 182
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P++ L +L A G IH+ V++ M ++ + NS++++Y+KCG + A R
Sbjct: 183 PDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRF 242
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F N+D R+ VS+NS+I+G+ Q G E++ LF KM++EG+ P +T+ ++++ + G
Sbjct: 243 FENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKC 302
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
++ K M++ + I P + M+ + ++A++L M
Sbjct: 303 DDAMELMKKMES-FRIVPDVFTWTSMISGFAQNNRRSQALELFREM 347
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+V+PN T +L + + G ++HA + + E + ++ LVS+Y+KCG++ +A
Sbjct: 82 NVKPN--TYMQLLQSCIDQGSAELGRKLHARIGLLE-EMNPFVETKLVSMYAKCGSLGEA 138
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F + ERN+ ++++MI +++ + E + F M ++G+VP++ +L AC +
Sbjct: 139 RKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNC 198
Query: 446 GLVEEG 451
G E G
Sbjct: 199 GDAETG 204
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 305/540 (56%), Gaps = 32/540 (5%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
++ +N LI Y + GR EA ++F+ M +++ +W M+ GY K G V AR++FD+M E
Sbjct: 98 TIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMME 157
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K+VV+W +V Y K CF + L+ RR M FN+ + + C + + QV
Sbjct: 158 KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQV 217
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG V GF +++L +SI+ Y + G M A +F M +D +W +++SGY G++
Sbjct: 218 HGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDM 277
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
A LF +MP K+ VSW+ + ISG+ N
Sbjct: 278 NSASELFHQMPEKNPVSWSAL-------------------------------ISGYARNS 306
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
EA +F +M++ + P Q T SS L A A+ A L G Q+H ++++ + + +
Sbjct: 307 LGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVS 366
Query: 371 SLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
SL+ +YSKCG + + +F + +++++V +N+MIS AQNG GE+A+ +F M + GL
Sbjct: 367 SLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLK 426
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
P++ITF+ +LSAC+H GLV+EG +FK+M + + P EHYAC++D+LGRAG E ++
Sbjct: 427 PDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVN 486
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
+ +M+ +P VW ALLG R H N++L + A+ ++EL+P S+ YV L+ LY+ +GK
Sbjct: 487 ELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGK 546
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+VR K IRK G SWI + +K H F+A + +EI + L+ +++ T+E
Sbjct: 547 WESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTEE 606
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 130/285 (45%), Gaps = 20/285 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALIS 79
A E+F MP +N VS++A+I+G+ R + +EA + + M P ++ S C A S
Sbjct: 280 ASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACAS 339
Query: 80 -GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAWT 137
LK G+ + + + + S++D Y K G + + +F M K +VV W
Sbjct: 340 IAALKHGK-QVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWN 398
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
M+ + E +F M G+ + IT ++ AC +EG++ ++
Sbjct: 399 TMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMT-- 456
Query: 198 GFDYDIILGN----SIITMYGRLG-FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+D+ + +I + GR G F++ N++ +M K D W++L+ + IE
Sbjct: 457 -YDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIEL 515
Query: 253 AYRLFER---MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
++ ER + + ++ ++ + ++ G E ++ +M EK
Sbjct: 516 GRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEK 560
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 214/715 (29%), Positives = 358/715 (50%), Gaps = 114/715 (15%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMR--NAVSYAAMITGFVRRGMFYEAEELY 61
R ++N MI AL++++ + +A ++F MP+R ++VS+ MI+G+ + G + E +
Sbjct: 72 RNIFTWNTMIRALVSSS-RMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETF 130
Query: 62 VNMPARWRD-----------------------------------------SVCSNALISG 80
M D + N+++
Sbjct: 131 SLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGM 190
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
Y+K G + A +F + + W SM+ GY + +A +IF++MPE++ V+W ++
Sbjct: 191 YVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLI 250
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
+ + +F+ M G + N +T + AC + G +H + R
Sbjct: 251 SIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHS 310
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
D++ GN +I MY + G +D A +VF + + D +SWNSLI+G VH G E+A LF +M
Sbjct: 311 LDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQM 370
Query: 261 -------------------PGKDFVSWTTMITGFSSK----------------------- 278
G D+ S ++ G++ K
Sbjct: 371 RRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDT 430
Query: 279 ----------------------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
G++ K+ F+MMPE++ VTW +++S +V N
Sbjct: 431 DKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNG 490
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
EE + ++ M V+P+ +T ++ + A A A + G Q+ H K + +VS+ N
Sbjct: 491 FSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVAN 550
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
S+V++YS+CG + +A F +ID+++++S+N+M++ FAQNGLG + ++ F M P
Sbjct: 551 SIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKP 610
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
N I+++SVLS C+H+GLV EG YF SM ++ I P EH++CMVD+LGRAG L +A DL
Sbjct: 611 NHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDL 670
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I M F+P VW ALLG+ R H +L LA+ AA+ LMEL+ + + YV+LS++YS G+
Sbjct: 671 IEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGEL 730
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
+ +R K+K IR S GCSWI + ++VH+F S +KE+ + L+ + K
Sbjct: 731 DNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMK 785
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 189/369 (51%), Gaps = 37/369 (10%)
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKNVVAWTA 138
Y G +A ++F+ +++ W +M+ R+ +A ++FD+MP K+ V+WT
Sbjct: 53 YSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTT 112
Query: 139 MVDGYMKVDCFEDGFDLFLSMRR----GGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
M+ GY + F+ F M R GG ++ + T + +ACG R +Q+H LV
Sbjct: 113 MISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALV 172
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
S+ GF + + NS++ MY + G +D A VF + + WNS+I GY +A
Sbjct: 173 SKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKAL 232
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
++F RMP +D VSW T+I+ FS G F + +
Sbjct: 233 QIFNRMPERDEVSWNTLISIFSQHG--------FGV-----------------------Q 261
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
F+EM + PN +T SVLSA A+T+ L G+ +HA +++M D+ N L+
Sbjct: 262 CLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLID 321
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+KCG + A R+F ++ E + +S+NS+I+G GLGE+AL LF +M+ +V ++
Sbjct: 322 MYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFI 381
Query: 435 FLSVLSACN 443
++L C+
Sbjct: 382 LPTILGVCS 390
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 135/287 (47%), Gaps = 60/287 (20%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++H + G D + L N+++ MY G +A +VF R+ +WN++I V +
Sbjct: 29 KLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSS 88
Query: 249 EIEEAYRLFERMP--GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+ +A +LF+ MP KD VSWTTMI+G+S G +S E F++M + G
Sbjct: 89 RMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTN-------DGG 141
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N + + + +SV+ A + Q+HA V K+ +
Sbjct: 142 KNYDPF--------------------SFTSVMKACGSLGDSRLAIQLHALVSKLGFGMET 181
Query: 367 SIQNSLVSLYSKCGNV-------------------------------VDAYRIFTNIDER 395
IQNS+V +Y KCG+V A +IF + ER
Sbjct: 182 CIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPER 241
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ VS+N++IS F+Q+G G + L +F +M ++G PN +T+ SVLSAC
Sbjct: 242 DEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSAC 288
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 37/132 (28%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI-------------- 397
++HA ++ ++S + + N+L+ +YS CG DA+++F RNI
Sbjct: 29 KLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSS 88
Query: 398 -------------------VSYNSMISGFAQNGLGEEALNLF----RKMKDEGLVPNQIT 434
VS+ +MISG++QNG + F R D G + +
Sbjct: 89 RMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFS 148
Query: 435 FLSVLSACNHVG 446
F SV+ AC +G
Sbjct: 149 FTSVMKACGSLG 160
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/557 (34%), Positives = 313/557 (56%), Gaps = 46/557 (8%)
Query: 115 KGRVI--EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
KG VI A ++FDKMPE+N+V WT M+ + ++ C D DLFL M G + T +
Sbjct: 1 KGSVIWAPAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYS 60
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL---GFMDEANKVFSMM 229
+ AC G Q+H V R G D+ +G S++ MY + G +D++ KVF M
Sbjct: 61 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 120
Query: 230 SKRDAVSWNSLISGYVHNGEIE-EAYRLFERM--------------------------PG 262
+ + +SW ++I+ Y +GE + EA LF +M G
Sbjct: 121 PEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTG 180
Query: 263 KDFVSWT-------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+ S+ ++I+ ++ G +E + + F+++ EK+ V++ AI+ G+ N
Sbjct: 181 EQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKN 240
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
+ EEAF F E+ + + T +S+LS +A+ + +G QIH ++K +S+ I
Sbjct: 241 LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCIC 300
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N+L+S+YS+CGN+ A+++F +++RN++S+ SMI+GFA++G AL +F KM + G
Sbjct: 301 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 360
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
PN+IT+++VLSAC+HVG++ EG +F SM + I P EHYACMVD+LGR+G L EA++
Sbjct: 361 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 420
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
INSM VW LLGA R H N +L + AA+ ++E EPD Y++LS+L++ G+
Sbjct: 421 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 480
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+D ++R K + + K GCSWI ++++VH F G S +I L ++ KE
Sbjct: 481 WKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKE 540
Query: 610 FDW-PKHDWSLLGLERD 625
+ P D+ L +E +
Sbjct: 541 MGYIPDTDFVLHDIEEE 557
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 242/520 (46%), Gaps = 88/520 (16%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALI 78
A+++F MP RN V++ MIT F + G +A +L+++M P R+ SV S
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK---KGRVIEAREIFDKMPEKNVVA 135
G L +G+ + +R+ + DV S+VD Y K G V ++R++F++MPE NV++
Sbjct: 69 LGLLALGK-QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127
Query: 136 WTAMVDGYMKV-DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
WTA++ Y + +C ++ +LF M G + N + + + +ACG G QV+
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G +GNS+I+MY R G M++A K F ++ +++ VS+N+++ GY N + EEA+
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247
Query: 255 RLFERMP----GKDFVSWTTMITG-----------------------------------F 275
LF + G ++ ++++G +
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
S GN+E + ++FN M +++ ++WT++I+GF + A F +ML +PN++T
Sbjct: 308 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 367
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VLSA + +++G Q S+Y + G V
Sbjct: 368 AVLSACSHVGMISEG------------------QKHFNSMYKEHGIV------------P 397
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ Y M+ ++GL EA+ M L+ + + + ++L AC G E G
Sbjct: 398 RMEHYACMVDLLGRSGLLVEAMEFINSMP---LMADALVWRTLLGACRVHGNTELG---R 451
Query: 456 KSMKTLYNIEP-GPEHYACMVDILGRAGSLAEAIDLINSM 494
+ + + EP P Y + ++ AG + + + SM
Sbjct: 452 HAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 491
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 179/414 (43%), Gaps = 52/414 (12%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM---PMR-NAVSYAAMITGFVRRGMFYE 56
M + S+ A+ITA + EA E+F M +R N S+++++ Y
Sbjct: 120 MPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 179
Query: 57 AEELYVNMPARWRDSV--CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
E++Y SV N+LIS Y + GR E+A + F+ + EK++V++ ++VDGY K
Sbjct: 180 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 239
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
+ E+ F LF + G+ ++ T L
Sbjct: 240 NLKS-------------------------------EEAFLLFNEIADTGIGISAFTFASL 268
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
+G Q+HG + + G+ + + N++I+MY R G ++ A +VF+ M R+
Sbjct: 269 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 328
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
+SW S+I+G+ +G A +F +M + +++ +++ S G + + + FN
Sbjct: 329 ISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNS 388
Query: 291 MPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
M ++ + + ++ + EA + M + + L ++L A
Sbjct: 389 MYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM---PLMADALVWRTLLGACRVHG 445
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRIFTNIDERNIV 398
G HA + + E D L+S L++ G D +I ++ ERN++
Sbjct: 446 NTELGR--HAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 497
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 182/471 (38%), Positives = 282/471 (59%), Gaps = 2/471 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACG 179
A +F P +V ++ G + D +D F+ MRR + +S + + +A
Sbjct: 58 ACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAA 117
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
R G+Q+H G D + +G ++I+MYG GF+ A KVF M + +A++WN+
Sbjct: 118 NLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNA 177
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+++ G+++ LF+ MP ++ +SW M+ G++ G LE + E+F MP KDDV+W
Sbjct: 178 MVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSW 237
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+ +I GF +N +EEAF +F E+ RK +RPN+ +L+ VLSA A L G +H + K
Sbjct: 238 STMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEK 297
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALN 418
+ VS+ N+L+ YSKCGNV+ A +F I +ERNIVS+ SM++ A +G GEEA+
Sbjct: 298 SGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIG 357
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
+F KM++ G+ P++I F+S+L AC+H GLVE+G YF MK +YNIEP EHY CMVD+
Sbjct: 358 IFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLY 417
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L +A + + M +W LLGA H ++ LA+ + L EL+P++++ +V
Sbjct: 418 GRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHV 477
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+LS+ Y+V GK +D VR +RI K+PG S I + ++ FLAG K
Sbjct: 478 LLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQ 528
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 192/428 (44%), Gaps = 63/428 (14%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP NA+++ AM+T R G +K G
Sbjct: 160 ARKVFDEMPEPNAIAWNAMVTACCR----------------------------GGDMKGG 191
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
R +F+ M +++++W M+ GY K G + ARE+F +MP K+ V+W+ M+ G+
Sbjct: 192 R-----ELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAH 246
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
FE+ F F ++R GM N +LT + AC + G +HG + + G + + +
Sbjct: 247 NGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSV 306
Query: 206 GNSIITMYGRLGFMDEANKVFS-MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK- 263
N+++ Y + G + A VF +M++R+ VSW S+++ +G EEA +F +M
Sbjct: 307 NNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESG 366
Query: 264 ---DFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDDVTWTAIISGFVNNEQYEEA 315
D +++ +++ S G +E+ E F+ M E + ++ + Q ++A
Sbjct: 367 IRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKA 426
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+ + +M + + ++L A + + Q+ + +++ ++ S L +
Sbjct: 427 YEFVCQM---PIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELD-PNNSSDHVLLSNA 482
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYN------------SMISGFAQNGLGEEALN----L 419
Y+ G DA + ++ E+ I + ++G Q + EEA +
Sbjct: 483 YAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEI 542
Query: 420 FRKMKDEG 427
R+++ EG
Sbjct: 543 IRRLRVEG 550
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 133/306 (43%), Gaps = 45/306 (14%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + + ++NAM+TA + E+F MP+RN +S+ M+ G+ + G A E+
Sbjct: 167 MPEPNAIAWNAMVTACCRGG-DMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREM 225
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEA------------------------------ 90
++ MP +D V + +I G+ G EEA
Sbjct: 226 FLEMPM--KDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAG 283
Query: 91 ----ARIFEAMVEKDVVAW-----GSMVDGYCKKGRVIEAREIFDK-MPEKNVVAWTAMV 140
+I +EK +AW +++D Y K G V+ A+ +F++ M E+N+V+WT+M+
Sbjct: 284 ALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMM 343
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ-VHGLVSRFGF 199
E+ +F M G+ + I L AC +G + + +
Sbjct: 344 AALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNI 403
Query: 200 DYDIILGNSIITMYGRLGFMDEANK-VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ I ++ +YGR G + +A + V M A+ W +L+ +G+++ A ++ E
Sbjct: 404 EPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKE 463
Query: 259 RMPGKD 264
R+ D
Sbjct: 464 RLSELD 469
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 107/267 (40%), Gaps = 68/267 (25%)
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
++ A RLF P D T+ I G +
Sbjct: 55 LDYACRLFRYTPNPDVFMHNTL-------------------------------IRGLYES 83
Query: 310 EQYEEAFRWFIEMLRKDVR-PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
++ +++ FIEM R P+ + + ++ A+A ++ G Q+H + +++ + +
Sbjct: 84 DRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLFV 143
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDE-------------------------------RNI 397
+L+S+Y +CG V A ++F + E RN+
Sbjct: 144 GTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNL 203
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
+S+N M++G+ + G L L R+M E + + +++ +++ H G EE F +F+
Sbjct: 204 MSWNVMLAGYTKAG----ELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRE 259
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSL 484
++ + P ++ +AG+L
Sbjct: 260 LQR-KGMRPNETSLTGVLSACAQAGAL 285
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 5/167 (2%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLV--SLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+L QIHA+V+K+ +ESD I L+ S ++ A R+F ++ +N++
Sbjct: 17 SLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTL 76
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
I G ++ +++L F +M+ P+ +F ++ A ++ V G I ++
Sbjct: 77 IRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVG-IQLHCQALVH 135
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
++ ++ + G G + A + + M EP W A++ A
Sbjct: 136 GLDTHLFVGTTLISMYGECGFVGFARKVFDEMP-EPNAIAWNAMVTA 181
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 220/645 (34%), Positives = 330/645 (51%), Gaps = 88/645 (13%)
Query: 14 TALINNNCSIY-------EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA 66
T L+N S Y +A +F +P+RN SY A+++ + R G EA L+ +P
Sbjct: 52 TFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPD 111
Query: 67 RWRDSVCSNALISGYLKVGR--CEEAARIFEAM--------------------VEKD--- 101
D NA+++ + GR +A R AM EKD
Sbjct: 112 P--DQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRT 169
Query: 102 ----------------VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
V ++VD Y K R +AR +FD MPE+NVV+W +++ Y +
Sbjct: 170 GEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQ 229
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LVSRFGFDYDII 204
+ LF+ M G + + +TL+ + AC REG QVH +V D++
Sbjct: 230 NGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMV 289
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
L N+++ MY + G +W EA +F+ MP +
Sbjct: 290 LNNALVDMYAKCGR-----------------TW--------------EARCIFDSMPSRS 318
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
VS T+++TG++ N+E + +F+ M EK+ + W +I+ + N + EEA R F+++ R
Sbjct: 319 IVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKR 378
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK------MNMESDVSIQNSLVSLYSK 378
+ P T +VL+A A L G Q H HV+K ESDV + NSLV +Y K
Sbjct: 379 DSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK 438
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
G++ D ++F + R+ VS+N+MI G+AQNG ++AL+LF +M P+ +T + V
Sbjct: 439 TGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGV 498
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSAC H GLV+EG YF SM + I P +HY CMVD+LGRAG L EA +LIN M EP
Sbjct: 499 LSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEP 558
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
+W +LLGA R H N++L + A L EL+P ++ PYV+LS++Y+ +GK + RVR
Sbjct: 559 DSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRR 618
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K + + K PGCSWI + K+++FLA K EI TL+ I
Sbjct: 619 SMKDRGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTLRII 663
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 167/363 (46%), Gaps = 35/363 (9%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+ L N++++ Y RLG + +A +VF + R+ S+N+L+S Y G +EA LFE +P
Sbjct: 51 ETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIP 110
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
D S+ ++ + G + +A R+
Sbjct: 111 DPDQCSYNAVVAALARHGRGHAA-----------------------------DALRFLAA 141
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M D N + +S LSA AA G Q+H V + DV I+++LV +Y+KC
Sbjct: 142 MHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCER 201
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
DA R+F + ERN+VS+NS+I+ + QNG EAL LF +M G P+++T SV+SA
Sbjct: 202 PEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSA 261
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C + EG M + +VD+ + G EA + +SM
Sbjct: 262 CAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVS 321
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
L G ++ N++ A++ ++E + + VL Y+ G++ + +R+ +
Sbjct: 322 ETSILTGYAKS-ANVEDAQVVFSQMVE---KNVIAWNVLIAAYAQNGEEEEA--IRLFVQ 375
Query: 562 LKR 564
LKR
Sbjct: 376 LKR 378
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ L+ HA ++K + + + N+LVS Y++ G + DA R+F I RN SYN+
Sbjct: 29 SAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNA 88
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
++S +A+ G +EA LF + D P+Q ++ +V++A
Sbjct: 89 LLSAYARLGRPDEARALFEAIPD----PDQCSYNAVVAA 123
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 225/705 (31%), Positives = 354/705 (50%), Gaps = 86/705 (12%)
Query: 5 TSASYNAM--ITALINN---NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
T+ASY ++ L+N + + +A ++F MP ++ S+ MI+ +V G EA E
Sbjct: 58 TAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARE 117
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM---------------------- 97
L+ + + +++ISGY K G EA +F +M
Sbjct: 118 LFDGCSCKSSIT--WSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSL 175
Query: 98 -----------------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKNVVAWTA 138
E +V +VD Y K V EA +F + KN V WTA
Sbjct: 176 GLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTA 235
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
MV GY + + F M G+ N T + AC G QVHG + + G
Sbjct: 236 MVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG 295
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
F ++ + ++++ MY + G + A + M D VSWNSL+ G+V +G EEA RLF+
Sbjct: 296 FGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFK 355
Query: 259 RMPGKDF-----------------------VSWTTMITGF--------------SSKGNL 281
M G++ V + TGF + G++
Sbjct: 356 NMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDM 415
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ + +F M EKD ++WT++++G+ N +EE+ + F +M V P+Q ++S+LSA
Sbjct: 416 DCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSAC 475
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
A L G Q+H +K + S+ NSLV++Y+KCG + DA IF ++ ++++++
Sbjct: 476 AELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWT 535
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
++I G+AQNG G +L + M G P+ ITF+ +L AC+H GLV+EG YF+ M +
Sbjct: 536 AIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKV 595
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I+PGPEHYACM+D+ GR+G L EA L++ M +P VW +LL A R H NL+LA+
Sbjct: 596 YGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAER 655
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA +L ELEP +A PYV+LS++YS K D ++R K K I K PGCSW+ + +V+
Sbjct: 656 AATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVN 715
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
F++ + EI + I KE + P +SL ++++
Sbjct: 716 TFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKE 760
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 248/505 (49%), Gaps = 53/505 (10%)
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
++ A + +N L++ K G+ +A ++F+ M +KD +W +M+ Y GR++
Sbjct: 54 IHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLV 113
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EARE+FD K+ + W++++ GY K C + FDLF SMR G + TL + C
Sbjct: 114 EARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCS 173
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM--SKRDAVSW 237
+ G +HG V + GF+ ++ + ++ MY + + EA +F + +++ V W
Sbjct: 174 SLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLW 233
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMIT-------------------- 273
++++GY NG+ +A F M + + ++ T++T
Sbjct: 234 TAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVK 293
Query: 274 -GFSSK--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
GF S G+L+ + + M + D V+W +++ GFV + EEA R
Sbjct: 294 SGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRL 353
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F M ++++ + T SVL+ ++N S +H ++K E+ + N+LV +Y+K
Sbjct: 354 FKNMHGRNMKIDDYTFPSVLNC-CVVGSINPKS-VHGLIIKTGFENYKLVSNALVDMYAK 411
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
G++ AY +F + E++++S+ S+++G+AQN EE+L +F M+ G+ P+Q S+
Sbjct: 412 TGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASI 471
Query: 439 LSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
LSAC + L+E G ++ +K+ + Y +V + + G L +A + SM +
Sbjct: 472 LSACAELTLLEFGKQVHLDFIKS--GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVK 529
Query: 498 PPPGVWGALL------GAGRTHLNL 516
W A++ G GR L
Sbjct: 530 DVI-TWTAIIVGYAQNGKGRNSLKF 553
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 191/545 (35%), Positives = 305/545 (55%), Gaps = 31/545 (5%)
Query: 71 SVCSNALISGYLKVGRCE---EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
SVC NAL++ Y+K E +A ++ + M KD + W +MV GY ++G V AR +F++
Sbjct: 195 SVC-NALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEE 253
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
+ K V W AM+ GY+ + F+LF M + + T T + AC + G
Sbjct: 254 VDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHG 313
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
VHG + R + F+ EA + N+L++ Y
Sbjct: 314 KSVHGQIIRL-----------------QPNFVPEAALPVN----------NALVTFYSKC 346
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
G I A R+F+ M KD VSW T+++G+ L+K++E+F MP K++++W ++SG+V
Sbjct: 347 GNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYV 406
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
+ E+A + F +M ++V+P T + ++A L G Q+H H+V++ E S
Sbjct: 407 HGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNS 466
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
N+L+++Y++CG V +A+ +F + + VS+N+MIS Q+G G EAL LF +M EG
Sbjct: 467 AGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEG 526
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ P++I+FL+VL+ACNH GLV+EGF YF+SMK + I PG +HY ++D+LGRAG + EA
Sbjct: 527 IYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEA 586
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
DLI +M FEP P +W A+L RT +++L AA L ++ P Y++LS+ YS
Sbjct: 587 RDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAA 646
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGT 607
G D RVR + + ++K PGCSWI +KVH+FL G + E+ L+ +
Sbjct: 647 GCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKM 706
Query: 608 KEFDW 612
++ +
Sbjct: 707 RKLGY 711
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 199/410 (48%), Gaps = 28/410 (6%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYVNM 64
+NAMI+ +++ ++ EAFE+F M + + ++ ++++ G+F + ++ +
Sbjct: 262 WNAMISGYVHSGMAV-EAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQI 320
Query: 65 PARWRDSV------CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
+ V +NAL++ Y K G A RIF+ M KDVV+W +++ GY + +
Sbjct: 321 IRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCL 380
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+A E+F++MP KN ++W MV GY+ ED LF MR + T AC
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAAC 440
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G + G Q+HG + + GF+ GN++ITMY R G + EA+ +F +M D+VSWN
Sbjct: 441 GELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWN 500
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM--- 291
++IS +G EA LF+RM + D +S+ T++T + G +++ F M
Sbjct: 501 AMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRD 560
Query: 292 ----PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
P +D +T +I + EA R I+ + P ++LS + +
Sbjct: 561 FGIIPGEDH--YTRLIDLLGRAGRIGEA-RDLIKTM--PFEPTPSIWEAILSGCRTSGDM 615
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
G+ + KM + D L + YS G VDA R+ + +R +
Sbjct: 616 ELGAHAADQLFKMTPQHD-GTYILLSNTYSAAGCWVDAARVRKLMRDRGV 664
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 139/301 (46%), Gaps = 46/301 (15%)
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP--EKDDV 297
LI Y + ++ A LF P VS T+++ +++ L ++ F+ +P +D V
Sbjct: 65 LIHLYTLSRDLPAAATLFCADPCP--VSATSLVAAYAAADRLPAAVSFFDAVPPARRDTV 122
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASA--ATATLNQGSQIH 354
A+IS + A F +L +RP+ + +++LSA ++ +Q+H
Sbjct: 123 LHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLH 182
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKC----------------------------------G 380
V+K +S+ N+LV+LY KC G
Sbjct: 183 CSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRG 242
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+V A +F +D + V +N+MISG+ +G+ EA LFR+M E + ++ TF SVLS
Sbjct: 243 DVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLS 302
Query: 441 ACNHVGLVEEG-FIYFKSMKTLYNIEPG---PEHYACMVDILGRAGSLAEAIDLINSMTF 496
AC +VGL G ++ + ++ N P P + A +V + G++A A + ++MT
Sbjct: 303 ACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNA-LVTFYSKCGNIAVARRIFDNMTL 361
Query: 497 E 497
+
Sbjct: 362 K 362
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 212/645 (32%), Positives = 351/645 (54%), Gaps = 58/645 (8%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDS----VCSNALISGYLKVG 85
R+ VS++A+I+ + +EA + +M P + + CSN + +G
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSN---KENISLG 61
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCK-KGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
+ + E DV +++D + K G + A ++FD+MP++NVV WT M+ +
Sbjct: 62 KIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQ 121
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
++ D DLFL M G + TL+ + AC G Q H LV + G D D+
Sbjct: 122 QLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVC 181
Query: 205 LGNSIITMYGRL---GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE-EAYRLF-ER 259
+G S++ MY + G +D+A KVF M + +SW ++I+GYV +G + EA LF E
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM 241
Query: 260 MPGK------DFVS-----------W---------------------TTMITGFSSKGNL 281
+ G+ F S W ++I+ +S GN+
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
E + + F+++ EK+ V++ I++ + + EEAF F E+ N T +S+LS +
Sbjct: 302 ENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGA 361
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
++ + +G QIH+ ++K +S++ I N+L+S+YS+CGN+ A+++F + + N++S+
Sbjct: 362 SSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWT 421
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
SMI+GFA++G AL F KM + G+ PN++T+++VLSAC+HVGL+ EG +FKSMK
Sbjct: 422 SMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVE 481
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
+ I P EHYAC+VD+LGR+G L EA++L+NSM F+ V LGA R H N+DL K
Sbjct: 482 HGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKH 541
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA+ ++E +P Y++LS+L++ G+ + +R K K + + K GCSWI +++KVH
Sbjct: 542 AAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVH 601
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
F G S +EI L ++ KE + P D+ L +E +
Sbjct: 602 KFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEE 646
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 205/406 (50%), Gaps = 54/406 (13%)
Query: 11 AMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------ 64
A+I + N + A+++F MP RN V++ MIT F + G +A +L+++M
Sbjct: 83 ALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYV 142
Query: 65 PARWRDS-VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK---KGRVIE 120
P R+ S V S G L +GR + + ++ ++ DV S+VD Y K G V +
Sbjct: 143 PDRFTLSGVVSACAEMGLLSLGR-QFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDD 201
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKV-DCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
AR++FD+MP NV++WTA++ GY++ C + +LFL M +G + N T + + +AC
Sbjct: 202 ARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACA 261
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
G QV+ LV + +GNS+I+MY R G M+ A K F ++ +++ VS+N+
Sbjct: 262 NLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNT 321
Query: 240 LISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITG--------------------- 274
+++ Y + EEA+ LF + G + ++ ++++G
Sbjct: 322 IVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSG 381
Query: 275 --------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
+S GN+E + ++FN M + + ++WT++I+GF + A F
Sbjct: 382 FKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFH 441
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+ML V PN++T +VLSA + +++G + H M +E +
Sbjct: 442 KMLEAGVSPNEVTYIAVLSACSHVGLISEGLK---HFKSMKVEHGI 484
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
M ++D V+W+A+IS + NNE+ EA F +ML PN+ + V A + ++
Sbjct: 1 MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60
Query: 350 GSQIHAHVVKMN-MESDVSIQNSLVSLYSKC-GNVVDAYRIFTNIDERNIVSYNSMISGF 407
G I ++K ESDV + +L+ ++ K G++ AY++F + +RN+V++ MI+ F
Sbjct: 61 GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
Q G +A++LF M G VP++ T V+SAC +GL+ G
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLG 164
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
++R++VS++++IS +A N EA++ F M + G PN+ F V AC++ + G
Sbjct: 3 NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62
Query: 453 IYF 455
I F
Sbjct: 63 IIF 65
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 205/659 (31%), Positives = 352/659 (53%), Gaps = 62/659 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR----DSVCSN 75
A E+F TMP R+ +S+ A+I G+ RR EA +LY M P R S C+N
Sbjct: 439 ARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTN 498
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG----YCKKGRVIEAREIFDKMPEK 131
+ S Y + I E ++ + + G + + Y + G ++EA+ +F+ +
Sbjct: 499 S--SAY------SDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR 550
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
++++W +M+ G+ + +E + LFL M++ G+ + IT + C G Q+H
Sbjct: 551 DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIH 610
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
L+ G D+ LGN++I MY R G + +A +VF + R+ +SW ++I G+ GE
Sbjct: 611 MLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDR 670
Query: 252 EAYRLFERMP--------------------------GKDFVSW-------------TTMI 272
+A+ LF +M GK ++ +I
Sbjct: 671 KAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALI 730
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
+ +S G++ + ++F+ MP +D ++W +I+G+ N A ++ +M + V N+
Sbjct: 731 SAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKF 790
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
+ S+L+A ++ + L +G ++HA +VK M+ DV + +L+S+Y+KCG++ +A +F N
Sbjct: 791 SFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNF 850
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
E+N+V++N+MI+ +AQ+GL +AL+ F M EG+ P+ TF S+LSACNH GLV EG
Sbjct: 851 TEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGN 910
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
F S+++ + + P EHY C+V +LGRAG EA LIN M F P VW LLGA R
Sbjct: 911 RIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRI 970
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H N+ LA+ AA + ++L + YV+LS++Y+ G+ D ++R + + IRK PG S
Sbjct: 971 HGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 1030
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERDWSYTA 630
WI + + +H F+A +S + EI L+ +S + + P + L L+++ T+
Sbjct: 1031 WIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETS 1089
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 156/620 (25%), Positives = 288/620 (46%), Gaps = 91/620 (14%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-----D 70
S+ +A ++F MP R+ +S+ ++I+ + ++G +A +L+ M P++
Sbjct: 132 SVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILT 191
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
+ CS A + K+ ++I EA ++D S+++ Y K + AR++F +
Sbjct: 192 ACCSPAELEYGKKI-----HSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYR 246
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
++VV++ M+ Y + E+ LF M G+ + +T L +A EG ++
Sbjct: 247 RDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRI 306
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H L G + DI +G ++ TM+ R G + A + + RD V +N+LI+ +G
Sbjct: 307 HKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHY 366
Query: 251 EEAYRLFERM---------------------------------------PGKDFVSWTTM 271
EEA+ + +M D ++
Sbjct: 367 EEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSL 426
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
I+ ++ G+L ++ ELFN MP++D ++W AII+G+ E EA + + +M + V+P +
Sbjct: 427 ISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGR 486
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+T +LSA ++ + G IH +++ ++S+ + N+L+++Y +CG++++A +F
Sbjct: 487 VTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEG 546
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-------- 443
R+I+S+NSMI+G AQ+G E A LF +MK EGL P++ITF SVL C
Sbjct: 547 TRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELG 606
Query: 444 ---HVGLVEEG--------------FIYFKSMKTLYNIEPGPEH-----YACMVDILGRA 481
H+ ++E G +I S++ Y + H + M+
Sbjct: 607 RQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQ 666
Query: 482 GSLAEAIDLINSMT---FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATP 536
G +A +L M F+P + ++L A + LD K H++ E D+
Sbjct: 667 GEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVG 726
Query: 537 YVVLSDLYSVIGKKRDGNRV 556
++S YS G D +V
Sbjct: 727 NALIS-AYSKSGSMTDARKV 745
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 252/548 (45%), Gaps = 78/548 (14%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGRCEEAARIF 94
N +Y ++ R+ EA+ ++ M D SN LI+ Y+K +A ++F
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
M +DV++W S++ Y ++G F K F
Sbjct: 141 LKMPRRDVISWNSLISCYAQQG--------FKK-----------------------KAFQ 169
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
LF M+ G + IT + AC G ++H + G+ D + NS++ MYG
Sbjct: 170 LFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYG 229
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTT 270
+ + A +VFS + +RD VS+N+++ Y +EE LF +M + D V++
Sbjct: 230 KCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYIN 289
Query: 271 MITGFSSK-----------------------------------GNLEKSIELFNMMPEKD 295
++ F++ G++ + + ++D
Sbjct: 290 LLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRD 349
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V + A+I+ + YEEAF + +M V N+ T SVL+A + + L G IH+
Sbjct: 350 VVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHS 409
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
H+ ++ SDV I NSL+S+Y++CG++ A +F + +R+++S+N++I+G+A+ E
Sbjct: 410 HISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGE 469
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACM 474
A+ L+++M+ EG+ P ++TFL +LSAC + +G I+ +++ I+ +
Sbjct: 470 AMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS--GIKSNGHLANAL 527
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA-KLAAQHLME-LEPD 532
+++ R GS+ EA ++ T W +++ H + + A KL + E LEPD
Sbjct: 528 MNMYRRCGSIMEAQNVFEG-TRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPD 586
Query: 533 SATPYVVL 540
T VL
Sbjct: 587 KITFASVL 594
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 129/236 (54%), Gaps = 4/236 (1%)
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGF 275
D +N ++ + ++ L+ + EA R+ +M G D +I +
Sbjct: 68 DLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMY 127
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
++ + ++F MP +D ++W ++IS + ++AF+ F EM P+++T
Sbjct: 128 VKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYI 187
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L+A + A L G +IH+ +++ + D +QNSL+++Y KC ++ A ++F+ I R
Sbjct: 188 SILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRR 247
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++VSYN+M+ +AQ EE + LF +M EG+ P+++T++++L A +++EG
Sbjct: 248 DVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEG 303
>gi|147861249|emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
Length = 932
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/544 (36%), Positives = 324/544 (59%), Gaps = 16/544 (2%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAAR 92
MP + VSY AMIT +++ +AE+L+ MP R V +A+I GY K G + A +
Sbjct: 1 MPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPDR--TIVAESAMIDGYAKAGLMDSAQK 58
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
+F+AM++ +V +W S++ GY + G+V +A ++FD+MP KNVV+WT MV GY + +
Sbjct: 59 VFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQA 118
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSIIT 211
+F M N+I+ T + ++ R E +++ H + R + ++ ++
Sbjct: 119 RSVFNQMPEK----NTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISG---C 171
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTM 271
+ G+ ++EA K+F +M R+AVSW ++SG NG + A F++MP KD +W M
Sbjct: 172 LDGKR--VNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAM 229
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
IT + + + ++ ELFN+M E++ VTW A+I G+ + EA + I MLR +RPN+
Sbjct: 230 ITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNE 289
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T++ +L++ L Q HA + + E + S+ N+L+++YS+ G++ + F +
Sbjct: 290 TTMTIILTSCWGMLELMQA---HALAIVVGCECETSLSNALITMYSRIGDISSSRIAFES 346
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ +++VS+ +M+ F +G G+ AL++F M G P++ITF+ VLSAC+H GLV++G
Sbjct: 347 LKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKG 406
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT-FEPPPGVWGALLGAG 510
F SM Y +EP EHY+C+VDILGRAG + EA+D++ M E V GALLGA
Sbjct: 407 QKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDGAVLGALLGAC 466
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H N+++A Q L+EL+P+S+ YV+L+++++ G + VR K K + +RK PG
Sbjct: 467 RLHGNVEMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAEVRKKMKDRNVRKVPG 526
Query: 571 CSWI 574
S I
Sbjct: 527 FSQI 530
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 157/357 (43%), Gaps = 72/357 (20%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M D S+ ++I+ + + +A ++F MP +N VS+ M+ G+ R G+ +A +
Sbjct: 63 MIDTNVFSWTSLISGYFRDG-QVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSV 121
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP ++++ A++ Y+ GR +EA ++F M ++++ +W +M+ G RV E
Sbjct: 122 FNQMPE--KNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNE 179
Query: 121 -------------------------------AREIFDKMP-------------------- 129
ARE FD+MP
Sbjct: 180 AFKLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLI 239
Query: 130 -----------EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
E+N+V W AM+DGY + + + M R + N T+TI+ +C
Sbjct: 240 VEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSC 299
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
E +Q H L G + + L N++ITMY R+G + + F + +D VSW
Sbjct: 300 WGML---ELMQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWT 356
Query: 239 SLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
+++ + ++G + A +F M D +++ +++ S G ++K +LF+ M
Sbjct: 357 AMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSM 413
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 186/515 (36%), Positives = 293/515 (56%), Gaps = 32/515 (6%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
+++ SN LI Y+K G+ +A ++F+ M +++ +W +MV GY K G ++ AR +FD MP
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP 140
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E++VV+W MV GY + + + RR G+ FN + L AC + + + Q
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQ 200
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
HG V GF +++L SII Y + G +
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCG-------------------------------Q 229
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+E A R F+ M KD WTT+I+G++ G++E + +LF MPEK+ V+WTA+I+G+V
Sbjct: 230 MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQ 289
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
A F +M+ V+P Q T SS L ASA+ A+L G +IH ++++ N+ + +
Sbjct: 290 GSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI 349
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDER-NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
+SL+ +YSK G++ + R+F D++ + V +N+MIS AQ+GLG +AL + M +
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
PN+ T + +L+AC+H GLVEEG +F+SM + I P EHYAC++D+LGRAG E +
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELM 469
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
I M FEP +W A+LG R H N +L K AA L++L+P+S+ PY++LS +Y+ G
Sbjct: 470 RKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHG 529
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
K ++R K +R+ K SWI ++ KV F
Sbjct: 530 KWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAF 564
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 178/420 (42%), Gaps = 70/420 (16%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA--- 57
M R S+N M++ + + + A +F +MP R+ VS+ M+ G+ + G +EA
Sbjct: 108 MHLRNLYSWNNMVSGYVKSG-MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWF 166
Query: 58 --------------------------EELYVNMPARWR--------DSVCSNALISGYLK 83
+L +N A + + V S ++I Y K
Sbjct: 167 YKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
G+ E A R F+ M KD+ W +++ GY K G + A ++F +MPEKN V+WTA++ GY
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
++ DLF M G+ T + A R G ++HG + R +
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNA 346
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMM-SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
I+ +S+I MY + G ++ + +VF + K D V WN++IS +G +A R+ + M
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
F + P + T I++ ++ EE RWF M
Sbjct: 407 -------------------------FRVQPNR--TTLVVILNACSHSGLVEEGLRWFESM 439
Query: 323 -LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
++ + P+Q + ++ ++ + +M E D I N+++ + GN
Sbjct: 440 TVQHGIVPDQEHYACLIDLLGRAGCFK---ELMRKIEEMPFEPDKHIWNAILGVCRIHGN 496
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 32/174 (18%)
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV-VK 359
+ +S + +A + ++ +R L+S+L T +L QG IH H+ +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-------------------------- 393
+ + N L+ +Y KCG +DA ++F +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 394 -----ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
ER++VS+N+M+ G+AQ+G EAL +++ + G+ N+ +F +L+AC
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTAC 189
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 305/540 (56%), Gaps = 32/540 (5%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
++ +N LI Y + GR EA ++F+ M +++ +W M+ GY K G V AR++FD+M E
Sbjct: 98 TIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMME 157
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K+VV+W +V Y K CF + L+ RR M FN+ + + C + + QV
Sbjct: 158 KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQV 217
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG V GF +++L +SI+ Y + G M A +F M +D +W +++SGY G++
Sbjct: 218 HGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDM 277
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
A LF +MP K+ VSW+ + ISG+ N
Sbjct: 278 NSASELFHQMPEKNPVSWSAL-------------------------------ISGYARNS 306
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
EA +F +M++ + P Q T SS L A A+ A L G Q+H ++++ + + +
Sbjct: 307 LGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVS 366
Query: 371 SLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
SL+ +YSKCG + + +F + +++++V +N+MIS AQNG GE+A+ +F M + GL
Sbjct: 367 SLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLK 426
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
P++ITF+ +LSAC+H GLV+EG +FK+M + + P EHY+C++D+LGRAG E ++
Sbjct: 427 PDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVN 486
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
+ +M+ +P VW ALLG R H N++L + A+ ++EL+P S+ YV L+ LY+ +GK
Sbjct: 487 ELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGK 546
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+VR K IRK G SWI + +K H F+A + +EI + L+ +++ T+E
Sbjct: 547 WESVEKVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTEE 606
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 128/282 (45%), Gaps = 14/282 (4%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALIS 79
A E+F MP +N VS++A+I+G+ R + +EA + + M P ++ S C A S
Sbjct: 280 ASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACAS 339
Query: 80 -GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAWT 137
LK G+ + + + + S++D Y K G + + +F M K +VV W
Sbjct: 340 IAALKHGK-QVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWN 398
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ-VHGLVSR 196
M+ + E +F M G+ + IT ++ AC +EG++ +
Sbjct: 399 TMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYD 458
Query: 197 FGFDYDIILGNSIITMYGRLG-FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
G D + +I + GR G F++ N++ +M K D W++L+ + IE +
Sbjct: 459 HGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRK 518
Query: 256 LFER---MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+ ER + + ++ ++ + ++ G E ++ +M EK
Sbjct: 519 VAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEK 560
>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 763
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 211/626 (33%), Positives = 342/626 (54%), Gaps = 46/626 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M RT +S+N MI+ + EA + + M N VS++A ++ R G +
Sbjct: 63 MPLRTVSSWNTMISGY-SQWGKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFL 121
Query: 57 AEELYVNM--PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
++++ + R +AL+ Y++ EA +FE + +++ V W M+ GY +
Sbjct: 122 GKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQ 181
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV-DCFEDGFDLFLSMRRGGMAF-NSITLT 172
+ + +A EIF+KMP ++VVAWT ++ GY K D E DLF MRR N TL
Sbjct: 182 RDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLD 241
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG------------------ 214
+ C R G VHGL + GFD+D + +++ Y
Sbjct: 242 CVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGE 301
Query: 215 --------------RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+G + EA +F + + +S N +I GY +G+ +++ +LFE+M
Sbjct: 302 ACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKM 361
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISGFVNNEQYEEAFRWF 319
K S TMIT +S G L+++++LF+ E++ VTW +++SG+++N ++ EA + +
Sbjct: 362 SLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLY 421
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+ M R V ++ T S + A A + QG +HAH+ K + +V + +LV YSKC
Sbjct: 422 VTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKC 481
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G++ DA R FT+I N+ ++ ++I+G+A +G G EA++ FR M D+G+VPN TF++VL
Sbjct: 482 GHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVL 541
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
SAC+H GLV+EG +F SM+ Y I P EHY C+VD+LGR+G + EA + I M +
Sbjct: 542 SACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKAD 601
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
+WGALL A N++L + AA L L+P+S + V LS++Y+ G R G + +++
Sbjct: 602 GVIWGALLNASCFWNNVELGERAAVKLFSLDPNSVSALVTLSNMYARRG--RWGKKTKIR 659
Query: 560 KKLK--RIRKSPGCSWIILKDKVHLF 583
K+L+ +RK G SWI L + VHLF
Sbjct: 660 KRLQSLELRKDQGFSWIELNNNVHLF 685
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 187/417 (44%), Gaps = 48/417 (11%)
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
V++ + + K G+++EAR +FD+MP + V +W M+ GY + + + L M
Sbjct: 37 VISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHS 96
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+ FN ++ + AC R G Q+H L+ + G+ +G++++ Y + + E
Sbjct: 97 SCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIRE 156
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN- 280
A VF + + V W+ +++GYV I +A +FE+MP +D V+WTT+I+G++ + +
Sbjct: 157 AEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDG 216
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
E++++LF M +V PN+ TL VL
Sbjct: 217 CERALDLFGCMRRSSEVL------------------------------PNEFTLDCVLRV 246
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN-IDERNIVS 399
A L G +H +K + D S+ ++L Y V DA R++ + + E
Sbjct: 247 CARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNV 306
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+S+I G G +EA +F ++D+ L+ N + G G FK K
Sbjct: 307 ADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMI---------KGYAMSG--QFKKSK 355
Query: 460 TLYNIEPGPEHYA---CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
L+ + +H M+ + + G L EA+ L + E W +++ +G H
Sbjct: 356 KLFE-KMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMM-SGYIH 410
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 345 ATLNQGSQIHA-HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
TL + SQ + HV+ N+ ++ ++K G +V+A +F + R + S+N+M
Sbjct: 24 TTLLEASQPYPPHVISTNIS---------IAHHAKTGKLVEARHMFDEMPLRTVSSWNTM 74
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
ISG++Q G EAL L M + N+++F + LSAC G
Sbjct: 75 ISGYSQWGKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGG 117
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 205/641 (31%), Positives = 347/641 (54%), Gaps = 70/641 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S++A+I+ L+ + E+ F P +N VS+ A I+GFVR G+ +EA +L
Sbjct: 113 MPERNEVSWSALISGLMKYG-RVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKL 171
Query: 61 YVNM---PARWRD-------SVC---------------------------SNALISGYLK 83
+ + R D C SN+LI+ L+
Sbjct: 172 FFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLR 231
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
+G + A R+F+ M ++DVV+W +++D Y + G + EAR IFD+MPE+N ++W+AM+ Y
Sbjct: 232 MGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARY 291
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
+ E+ LF M + G N A G+ +HG V++ G D D+
Sbjct: 292 SQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDV 351
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+G+S+I +Y + G D+ V F+ + K
Sbjct: 352 FIGSSLIDLYCKCGKPDDGRLV-------------------------------FDLILEK 380
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ V W +M+ G+S G LE++ ELF ++PEK+DV+W II+G++ NEQ E+ F +L
Sbjct: 381 NVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLL 440
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
PN+ T SSVL A A+ A+L++G +H ++K+ ++ D+ + +L +Y+KCG++
Sbjct: 441 VSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIG 500
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSAC 442
+ ++F + E+N +S+ MI G A++G E+L LF +M + + PN++ LSVL AC
Sbjct: 501 SSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFAC 560
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLV++G YF SM+ +Y I+P +HY C+VD+L R+G L EA + I ++ F+P
Sbjct: 561 SHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANA 620
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W ALL + + + +A+ A+ L +L +++ YV+LS++Y+ G+ D + +R +
Sbjct: 621 WAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMRE 680
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K ++KS GCSW+ ++++VH F + S EI TLQ +
Sbjct: 681 KGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLL 721
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 231/459 (50%), Gaps = 69/459 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V SN +IS Y++ G +A +F+ M E++ V+W +++ G K GRV E+ F++ P
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+NVV+WTA + G+++ + LF + G+ N +T T + ACG + G+
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+ GLV + GF++ + + NS+IT+ R+G +D A +VF M KRD VSW +++ YV G+
Sbjct: 206 ILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGD 265
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+ EA R+F+ MP ++ +SW+ MI +S G E++++LF+
Sbjct: 266 LREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFS-------------------- 305
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
+M+++ +PN + LSA A+ L+ G IH HV K+ ++ DV I
Sbjct: 306 -----------KMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIG 354
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG---------------- 413
+SL+ LY KCG D +F I E+N+V +NSM+ G++ NG
Sbjct: 355 SSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDV 414
Query: 414 ---------------EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKS 457
E+ L +F + G PN+ TF SVL AC + +++G ++ K
Sbjct: 415 SWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKI 474
Query: 458 MK--TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+K Y+I G + D+ + G + + + M
Sbjct: 475 IKLGIQYDIFVG----TALTDMYAKCGDIGSSKQVFERM 509
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 164/355 (46%), Gaps = 33/355 (9%)
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+G +H + + GF + ++ +Y E +++ D V N +IS YV
Sbjct: 39 QGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYV 98
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
G + +A LF+ MP ++ VSW+ +I+G G +E+S+ F P ++ V+WTA ISG
Sbjct: 99 QWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISG 158
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
FV N EA + F +L VRPN +T +SV+ A G I VVK E
Sbjct: 159 FVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHY 218
Query: 366 VSIQNSLVSL-------------------------------YSKCGNVVDAYRIFTNIDE 394
+S+ NSL++L Y + G++ +A RIF + E
Sbjct: 219 LSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
RN +S+++MI+ ++Q+G EEAL LF KM EG PN F LSA + + G I
Sbjct: 279 RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAG-IN 337
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
T I+ + ++D+ + G + L+ + E W +++G
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILEKNVVCWNSMVGG 391
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 207/662 (31%), Positives = 354/662 (53%), Gaps = 58/662 (8%)
Query: 6 SASYNAMITALINNNCSIYE-----AFEIFATMP--MRNAVSYAAMITGFVR-------- 50
+AS+ + +LI CS+ A+ +FA +P +R+ S+ +++ R
Sbjct: 45 AASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLNPLSRHHPVSALS 104
Query: 51 --RGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
R M E + + + + + S A ++ + +V ++
Sbjct: 105 HFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSSCGSNNVFVSTAL 164
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF-LSMRRGGMAFN 167
++ YCK G V +A+ +FD M +N V+W AMV GY C E+ F+LF L +++ + N
Sbjct: 165 LNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKN 224
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + A G Q+HGLV + G + + NS++TMY + MD A +VF
Sbjct: 225 EFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFG 284
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSW------------------- 268
+R++++W+++I+GY NGE A R+F +M F
Sbjct: 285 SSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVV 344
Query: 269 --------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVT-WTAIISGFV 307
+ ++ ++ G + + + F+ + + DDV WTA+I+G V
Sbjct: 345 GKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHV 404
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N ++EEA + M ++ + P+ LT++SVL A A A L+ G Q+HA ++K S
Sbjct: 405 QNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGS 464
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ +L ++YSKCGN+ D+ +F + +R+++S+NS+IS F+Q+G G +AL++F +MK EG
Sbjct: 465 VGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEG 524
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
P+ ITF+++LSAC+H+GLV+ G+ YF++M YN+ P +HYACMVDIL RAG L EA
Sbjct: 525 TAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEA 584
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
D I+S+T + +W +LGA R+ + D+ A + LMEL + ++ Y++LS++Y+
Sbjct: 585 KDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQ 644
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGT 607
K D RVR +L+ + K GCSW+ L ++VH+F+ G + + + I V L ++K
Sbjct: 645 RKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVHVFVVGEQQHPEAENINVELIRLAKHM 704
Query: 608 KE 609
K+
Sbjct: 705 KD 706
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 192/583 (32%), Positives = 324/583 (55%), Gaps = 39/583 (6%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW- 68
N+M+ ++ + A EIF +MP R+ VS+ +I+ + G EA ++ V+M +
Sbjct: 229 NSMLVGYAKSH-GVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGV 287
Query: 69 -RDSVCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEARE 123
DS + ++ ++ E ++ ++ D +MV+ Y K G EA+
Sbjct: 288 RPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKR 347
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F + ++N V+WT ++ G+++ CF + +LF MR MA + L L C
Sbjct: 348 VFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMD 407
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G Q+H L + G +++ NS+I+M
Sbjct: 408 ICLGSQLHSLCLKSGHTRAVVVSNSLISM------------------------------- 436
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
Y G ++ A +F M +D VSWT MIT +S GN+ K+ E F+ M ++ +TW A++
Sbjct: 437 YAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAML 496
Query: 304 SGFVNNEQYEEAFRWFIEML-RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
++ + E+ + + +ML KDV P+ +T ++ A G QI H VK+ +
Sbjct: 497 GAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGL 556
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
D S+ N+++++YSKCG + +A + F + +++VS+N+MI+G++Q+G+G++A+ +F
Sbjct: 557 ILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDD 616
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
+ ++G P+ I++++VLS C+H GLVEEG YF MK +NI PG EH++CMVD+LGRAG
Sbjct: 617 ILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAG 676
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L EA +LI+ M +P VWGALL A +TH N DLA+LAA+HL +L+ + Y++L+
Sbjct: 677 HLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAK 736
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+Y+ GK D +VR + K I+KSPG SW+ + ++VH+F A
Sbjct: 737 MYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKA 779
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 191/370 (51%), Gaps = 33/370 (8%)
Query: 75 NALISGYLKVGRCEEAARIF-EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N L+ YL G +A + + + E +V+ M++GY K G + +A E+F +MP ++V
Sbjct: 64 NTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDV 123
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHG 192
+W ++ GY + F + D+F+SMR+ G + N+ T + ++CG + +Q+ G
Sbjct: 124 ASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLG 183
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
L+S+F D + +++ M R G MD A+K FS
Sbjct: 184 LLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFS------------------------- 218
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
R+ + +M+ G++ ++ ++E+F MPE+D V+W +IS + +
Sbjct: 219 ------RIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRV 272
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA ++M K VRP+ T +S L+A A ++L G Q+H V++ D + +++
Sbjct: 273 REALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAM 332
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V LY+KCG +A R+F+++ +RN VS+ +I GF Q G E++ LF +M+ E + +Q
Sbjct: 333 VELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQ 392
Query: 433 ITFLSVLSAC 442
+++S C
Sbjct: 393 FALATLISGC 402
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 143/306 (46%), Gaps = 37/306 (12%)
Query: 238 NSLISGYVHNGEIEEAYRLF-ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
N+L+ Y+ G + +A L + + + ++ M+ G++ G+L ++ELF MP +D
Sbjct: 64 NTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDV 123
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHA 355
+W I+SG+ + Q+ A F+ M + D PN T V+ + A Q+
Sbjct: 124 ASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLG 183
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCG-------------------------------NVVD 384
+ K + + D +Q +LV + +CG V
Sbjct: 184 LLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDH 243
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A IF ++ ER++VS+N +IS +++G EAL++ M +G+ P+ T+ S L+AC
Sbjct: 244 ALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACAR 303
Query: 445 VGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
+ +E G ++ + ++ L +I+P + MV++ + G EA + +S+ + W
Sbjct: 304 LSSLEWGKQLHVQVIRNLPHIDPYVA--SAMVELYAKCGCFKEAKRVFSSLR-DRNSVSW 360
Query: 504 GALLGA 509
L+G
Sbjct: 361 TVLIGG 366
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 34/184 (18%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG------------- 380
L+ L + A + L +H+ ++ + + S V +QN+L+ Y CG
Sbjct: 28 LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87
Query: 381 ---NVV----------------DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
NV+ DA +F + R++ S+N+++SG+ Q+G AL++F
Sbjct: 88 TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147
Query: 422 KMKDEG-LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
M+ G +PN TF V+ +C +G E + + + ++ + P+ +VD+L R
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGW-HEVALQLLGLLSKFDSQDDPDVQTALVDMLVR 206
Query: 481 AGSL 484
G++
Sbjct: 207 CGAM 210
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 309/549 (56%), Gaps = 44/549 (8%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++FDKMPE+N+V WT M+ + ++ C D DLFL M G + T + + AC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL---GFMDEANKVFSMMSKRDAVSW 237
G Q+H V R G D+ +G S++ MY + G +D++ KVF M + + +SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 238 NSLISGYVHNGEIE-EAYRLFERM--------------------------PGKDFVSWT- 269
++I+ Y +GE + EA LF +M G+ S+
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 270 ------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
++I+ ++ G +E + + F+++ EK+ V++ AI+ G+ N + EEAF
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F E+ + + T +S+LS +A+ + +G QIH ++K +S+ I N+L+S+YS
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
+CGN+ A+++F +++RN++S+ SMI+GFA++G AL +F KM + G PN+IT+++
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
VLSAC+HVG++ EG +F SM + I P EHYACMVD+LGR+G L EA++ INSM
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 423
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
VW LLGA R H N +L + AA+ ++E EPD Y++LS+L++ G+ +D ++R
Sbjct: 424 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 483
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHD 616
K + + K GCSWI ++++VH F G S +I L ++ KE + P D
Sbjct: 484 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 543
Query: 617 WSLLGLERD 625
+ L +E +
Sbjct: 544 FVLHDIEEE 552
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 242/520 (46%), Gaps = 88/520 (16%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALI 78
A+++F MP RN V++ MIT F + G +A +L+++M P R+ SV S
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK---KGRVIEAREIFDKMPEKNVVA 135
G L +G+ + +R+ + DV S+VD Y K G V ++R++F++MPE NV++
Sbjct: 64 LGLLALGK-QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122
Query: 136 WTAMVDGYMKV-DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
WTA++ Y + +C ++ +LF M G + N + + + +ACG G QV+
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G +GNS+I+MY R G M++A K F ++ +++ VS+N+++ GY N + EEA+
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242
Query: 255 RLFERMP----GKDFVSWTTMITG-----------------------------------F 275
LF + G ++ ++++G +
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
S GN+E + ++FN M +++ ++WT++I+GF + A F +ML +PN++T
Sbjct: 303 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 362
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VLSA + +++G Q S+Y + G V
Sbjct: 363 AVLSACSHVGMISEG------------------QKHFNSMYKEHGIV------------P 392
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ Y M+ ++GL EA+ M L+ + + + ++L AC G E G
Sbjct: 393 RMEHYACMVDLLGRSGLLVEAMEFINSMP---LMADALVWRTLLGACRVHGNTELG---R 446
Query: 456 KSMKTLYNIEP-GPEHYACMVDILGRAGSLAEAIDLINSM 494
+ + + EP P Y + ++ AG + + + SM
Sbjct: 447 HAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 486
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 179/414 (43%), Gaps = 52/414 (12%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM---PMR-NAVSYAAMITGFVRRGMFYE 56
M + S+ A+ITA + EA E+F M +R N S+++++ Y
Sbjct: 115 MPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT 174
Query: 57 AEELYVNMPARWRDSV--CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
E++Y SV N+LIS Y + GR E+A + F+ + EK++V++ ++VDGY K
Sbjct: 175 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 234
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
+ E+ F LF + G+ ++ T L
Sbjct: 235 NLKS-------------------------------EEAFLLFNEIADTGIGISAFTFASL 263
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
+G Q+HG + + G+ + + N++I+MY R G ++ A +VF+ M R+
Sbjct: 264 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 323
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
+SW S+I+G+ +G A +F +M + +++ +++ S G + + + FN
Sbjct: 324 ISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNS 383
Query: 291 MPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
M ++ + + ++ + EA + M + + L ++L A
Sbjct: 384 MYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM---PLMADALVWRTLLGACRVHG 440
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRIFTNIDERNIV 398
G HA + + E D L+S L++ G D +I ++ ERN++
Sbjct: 441 NTELGR--HAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 492
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 212/649 (32%), Positives = 344/649 (53%), Gaps = 58/649 (8%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV---G 85
+F MP RN VS+ +I G+ + F EA EL+ + + + + + LK+
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHE--LNPFVFTTVLKLLVSM 59
Query: 86 RCEEAARIFEAMVEKDVVAWGS-------MVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
E RI V K V +GS ++D Y G V ARE+FD++ K++V+WT
Sbjct: 60 EWAELGRIVHGCVLK--VGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTG 117
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ Y + DCF + + F MR G N+ T + +AC + G VH V +
Sbjct: 118 MIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTN 177
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
++ D+ +G ++ +Y R G D+A + F M K D + W+ +IS + +G+ E+A +F
Sbjct: 178 YERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFC 237
Query: 259 RM------PGK---------------------------------DFVSWTTMITGFSSKG 279
+M P + D ++ ++ G
Sbjct: 238 QMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCG 297
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+E+S+ELF + +++DV+W II +V E A F MLR V+ ++T SS+L
Sbjct: 298 CIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILR 357
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A A A L G Q+H K DV++ N+L+ +Y+KCG++ DA +F +D R+ VS
Sbjct: 358 ACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVS 417
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+N++I G++ +GLG EA+ +F MK+ P+++TF+ VLSAC++ G ++EG YF SMK
Sbjct: 418 WNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMK 477
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
Y IEP EHY CMV ++GR+G+L +A+ I + FEP +W ALLGA H +++L
Sbjct: 478 QDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELG 537
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR--IRKSPGCSWIILK 577
+++AQ ++ELEP +V+LS++Y+ +R GN ++K +KR ++K PG SWI +
Sbjct: 538 RISAQRVLELEPRDEASHVLLSNIYA--RARRWGNVAYVRKHMKRKGVKKEPGLSWIENQ 595
Query: 578 DKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
VH F S DLK I L+ ++ T++ + P+ + LL +E D
Sbjct: 596 GNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDD 644
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/648 (31%), Positives = 349/648 (53%), Gaps = 70/648 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S++A+I+ L+ + E+ F P +N VS+ A I+GFVR G+ +EA +L
Sbjct: 113 MPERNEVSWSALISGLMKYG-RVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKL 171
Query: 61 YVNM---PARWRD-------SVC---------------------------SNALISGYLK 83
+ + R D C SN+LI+ L+
Sbjct: 172 FFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLR 231
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
+G + A R+F+ M ++DVV+W +++D Y + G + EAR IFD+MPE+N ++W+AM+ Y
Sbjct: 232 MGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARY 291
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
+ E+ LF M + G N A G+ +HG V++ G D D+
Sbjct: 292 SQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDV 351
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+G+S+I +Y + G D+ V F+ + K
Sbjct: 352 FIGSSLIDLYCKCGKPDDGRLV-------------------------------FDLILEK 380
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ V W +M+ G+S G LE++ ELF ++PEK+DV+W II+G++ NEQ E+ F +L
Sbjct: 381 NVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLL 440
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
PN+ T SSVL A A+ A+L++G +H ++K+ ++ D+ + +L +Y+KCG++
Sbjct: 441 VSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIG 500
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSAC 442
+ ++F + E+N +S+ MI G A++G E+L LF +M + + PN++ LSVL AC
Sbjct: 501 SSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFAC 560
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLV++G YF SM+ +Y I+P +HY C+VD+L R+G L EA + I ++ F+P
Sbjct: 561 SHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANA 620
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W ALL + + + +A+ A+ L +L +++ YV+LS++Y+ G+ D + +R +
Sbjct: 621 WAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMRE 680
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEF 610
K ++KS GCSW+ ++++VH F + S EI TLQ + K F
Sbjct: 681 KGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEMKCF 728
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 228/459 (49%), Gaps = 69/459 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V SN +IS Y++ G +A +F+ M E++ V+W +++ G K GRV E+ F++ P
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+NVV+WTA + G+++ + LF + G+ N +T T + ACG + G+
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+ GLV + GF++ + + NS+IT+ R+G +D A +VF M KRD VSW +++ YV G+
Sbjct: 206 ILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGD 265
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+ EA R+F+ MP ++ +SW+ MI +S G E
Sbjct: 266 LREARRIFDEMPERNEISWSAMIARYSQSGYAE--------------------------- 298
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
EA + F +M+++ +PN + LSA A+ L+ G IH HV K+ ++ DV I
Sbjct: 299 ----EALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIG 354
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG---------------- 413
+SL+ LY KCG D +F I E+N+V +NSM+ G++ NG
Sbjct: 355 SSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDV 414
Query: 414 ---------------EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKS 457
E+ L +F + G PN+ TF SVL AC + +++G ++ K
Sbjct: 415 SWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKI 474
Query: 458 MK--TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+K Y+I G + D+ + G + + + M
Sbjct: 475 IKLGIQYDIFVG----TALTDMYAKCGDIGSSKQVFERM 509
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 140/287 (48%), Gaps = 31/287 (10%)
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+G +H + + GF + ++ +Y E +++ D V N +IS YV
Sbjct: 39 QGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYV 98
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
G + +A LF+ MP ++ VSW+ +I+G G +E+S+ F P ++ V+WTA ISG
Sbjct: 99 QWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISG 158
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
FV N EA + F +L VRPN +T +SV+ A G I VVK E
Sbjct: 159 FVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHY 218
Query: 366 VSIQNSLVSL-------------------------------YSKCGNVVDAYRIFTNIDE 394
+S+ NSL++L Y + G++ +A RIF + E
Sbjct: 219 LSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
RN +S+++MI+ ++Q+G EEAL LF KM EG PN F LSA
Sbjct: 279 RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSA 325
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/631 (31%), Positives = 348/631 (55%), Gaps = 51/631 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--------PARWRDSVC 73
S+ +A + F TM +RN VS+ MI+G+ + G +A +Y+ M P + S+
Sbjct: 207 SLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTF-GSII 265
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
I+G + +GR + + ++ + ++A +++ Y + G+++ A ++F + K++
Sbjct: 266 KACCIAGDIDLGR-QLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDL 324
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
++W +M+ G+ ++ + LF M R+G N +F AC G Q+HG
Sbjct: 325 ISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHG 384
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ ++FG ++ G S+ MY + GF+ A + F + D VSWN++I+ + +G++ E
Sbjct: 385 MCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNE 444
Query: 253 AYRLFERM-------PGKDFVS--------------------------------WTTMIT 273
A F +M G F+S +++T
Sbjct: 445 AIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLT 504
Query: 274 GFSSKGNLEKSIELFNMMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++ NL + +F + E + V+W AI+S + ++Q E FR F ML + +P+ +
Sbjct: 505 MYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNI 564
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T++++L A A+L G+Q+H VK + DVS+ N L+ +Y+KCG++ A +F +
Sbjct: 565 TITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGST 624
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+IVS++S+I G+AQ GLG EALNLFR MK+ G+ PN++T+L VLSAC+H+GLVEEG+
Sbjct: 625 QNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGW 684
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
++ +M+ I P EH +CMVD+L RAG L EA + I M F P +W LL + +T
Sbjct: 685 HFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKT 744
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H N+D+A+ AA+++++L+P ++ V+LS++++ +G ++ R+R K ++K PG S
Sbjct: 745 HGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQS 804
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
WI +KD++H+F + S +I L+ +
Sbjct: 805 WIAVKDQIHVFFSEDNSHQQRGDIYTMLEDL 835
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 263/530 (49%), Gaps = 56/530 (10%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
I ++ + D+V +++ Y K G + +AR+ FD M +NVV+WT M+ GY + D
Sbjct: 182 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQEND 241
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
+++ M + G + +T + +AC G Q+HG V + G+D+ +I N++I+
Sbjct: 242 AIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALIS 301
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------P--- 261
MY R G + A+ VF+M+S +D +SW S+I+G+ G EA LF M P
Sbjct: 302 MYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEF 361
Query: 262 ------------------------------GKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
G++ + ++ ++ G L +I F +
Sbjct: 362 IFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQI 421
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
D V+W AII+ F ++ EA +F +M+ + P+ +T S+L A + T+NQG+
Sbjct: 422 ESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGT 481
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER-NIVSYNSMISGFAQN 410
QIH++++K+ ++ + ++ NSL+++Y+KC N+ DA+ +F ++ E N+VS+N+++S Q+
Sbjct: 482 QIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQH 541
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPE 469
E LF+ M P+ IT ++L C + +E G ++ S+K+ ++
Sbjct: 542 KQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVS 601
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQH 525
+ ++D+ + GSL A D+ S T P W +L+ G H L+L ++
Sbjct: 602 NR--LIDMYAKCGSLKHARDVFGS-TQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKN- 657
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDG----NRVRMKKKLKRIRKSPGC 571
+ ++P+ T VLS S IG +G N + ++ + R+ C
Sbjct: 658 -LGVQPNEVTYLGVLSAC-SHIGLVEEGWHFYNTMEIELGIPPTREHVSC 705
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 187/423 (44%), Gaps = 54/423 (12%)
Query: 140 VDGYMKVDC----FEDGFDLF-LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+ Y+ + C + + D F + + S T L AC + G ++H +
Sbjct: 124 TNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHI 183
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ D++L N I+ MYG+ G + +A K F M R+ VSW +ISGY NG+ +A
Sbjct: 184 LKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAI 243
Query: 255 RLFERM-------------------------------------PGKD--FVSWTTMITGF 275
++ +M G D ++ +I+ +
Sbjct: 244 IMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMY 303
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV-RPNQLTL 334
+ G + + ++F M+ KD ++W ++I+GF EA F +M R+ +PN+
Sbjct: 304 TRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIF 363
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
SV SA + G QIH K + +V SL +Y+K G + A R F I+
Sbjct: 364 GSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIES 423
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
++VS+N++I+ F+ +G EA+ F +M GL+P+ ITFLS+L AC + +G
Sbjct: 424 PDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQG--- 480
Query: 455 FKSMKTLYNIEPGPEHYACMVDIL----GRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
+ Y I+ G + A + + L + +L +A ++ ++ W A+L A
Sbjct: 481 --TQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSAC 538
Query: 511 RTH 513
H
Sbjct: 539 LQH 541
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 107/207 (51%), Gaps = 14/207 (6%)
Query: 296 DVTWTAIISGFVNNEQYEEAFRWF-IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
+++ + I+ Y EA F ++ T +++ A + +L G +IH
Sbjct: 121 ELSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIH 180
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
H++K N + D+ +QN ++++Y KCG++ DA + F + RN+VS+ MISG++QNG
Sbjct: 181 DHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQEN 240
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN--IEPGPEHYA 472
+A+ ++ +M G P+ +TF S++ AC G ++ G + L+ I+ G +H+
Sbjct: 241 DAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLG-------RQLHGHVIKSGYDHHL 293
Query: 473 ----CMVDILGRAGSLAEAIDLINSMT 495
++ + R G + A D+ ++
Sbjct: 294 IAQNALISMYTRFGQIVHASDVFTMIS 320
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 286/493 (58%), Gaps = 14/493 (2%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + AR++FD +PE +V +W M GY ++ C + G L+L M + + T LF
Sbjct: 62 GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLF 121
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+ R + G ++H V ++G D ++ N++I MY G +D A +F M K D V
Sbjct: 122 KGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVV 181
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
+WN++ISGY R+ KD +SWT ++TGF + G ++ + + F+ MPE+D
Sbjct: 182 TWNAMISGY-------------NRIK-KDVISWTAIVTGFVNTGQVDAARKYFHKMPERD 227
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V+WTA+I G++ Y+EA F EM ++P++ T+ SVL+A A L G I
Sbjct: 228 HVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRT 287
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
++ K +++D + N+L+ +Y KCGNV A IF + +R+ ++ +M+ G A NG GEE
Sbjct: 288 YIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEE 347
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
ALN+F +M + P+++T++ VLSAC H G+V+EG +F SM + IEP HY CMV
Sbjct: 348 ALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMV 407
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D+LG+AG L EA ++I +M +P VWGALLGA R H + ++A+ A + ++ELEP++
Sbjct: 408 DLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGA 467
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
YV+ ++Y+ K +R + I+K+PGCS I + VH F+AG +S KE
Sbjct: 468 VYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKE 527
Query: 596 IEVTLQTISKGTK 608
I L ++ K
Sbjct: 528 IYGKLNKMTSDLK 540
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 153/337 (45%), Gaps = 47/337 (13%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS--VCSNALISGYLKVGRCEEAARIF 94
+ +Y + GF R EL+ ++ DS NALI+ Y G + A IF
Sbjct: 113 DCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIF 172
Query: 95 E-----------AMV------EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ AM+ +KDV++W ++V G+ G+V AR+ F KMPE++ V+WT
Sbjct: 173 DMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWT 232
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
AM+DGY++++C+++ LF M+ + + T+ + AC + G + + +
Sbjct: 233 AMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKN 292
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
D +GN++I MY + G ++ A +F+ + +RD +W +++ G NG EEA +F
Sbjct: 293 KVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMF 352
Query: 258 ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
+M L+ S+ D+VT+ ++S + +E +
Sbjct: 353 SQM--------------------LKASV-------TPDEVTYVGVLSACTHTGMVDEGKK 385
Query: 318 WFIEML-RKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+F M R + PN ++ L + +I
Sbjct: 386 FFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEI 422
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 125/261 (47%), Gaps = 9/261 (3%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+ A++T +N + A + F MP R+ VS+ AMI G++R + EA L+ M
Sbjct: 199 SWTAIVTGFVNTG-QVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTS 257
Query: 68 --WRDSVCSNALISGYLKVGRCE--EAARIF--EAMVEKDVVAWGSMVDGYCKKGRVIEA 121
D ++++ ++G E E R + + V+ D +++D Y K G V A
Sbjct: 258 KIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMA 317
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
IF+ +P+++ WTAMV G C E+ ++F M + + + +T + AC
Sbjct: 318 LSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHT 377
Query: 182 FRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNS 239
EG + + +R G + +I ++ + G+ G + EA+++ M K +++ W +
Sbjct: 378 GMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGA 437
Query: 240 LISGYVHNGEIEEAYRLFERM 260
L+ + + E A R E++
Sbjct: 438 LLGACRIHKDAEMAERAIEQI 458
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS--KCGNVVDA 385
+ + +T + LS ++ QIH+ +K + + IQN ++S + G++ A
Sbjct: 8 QSSPVTENPPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYA 67
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
++F I E ++ S+N M G+++ + ++L+ +M + + P+ T+
Sbjct: 68 RQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTY 117
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/551 (34%), Positives = 305/551 (55%), Gaps = 39/551 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
+V ++VD YCK RV+ AR++FD MPE++ V W M++G +K CF+D LF M
Sbjct: 142 NVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMV 201
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G+ +S T+T + A + G+ + L + GF + + +I++Y + G ++
Sbjct: 202 ADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVN 261
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-------ERMPGKDFVSWTTM-- 271
A +F +++ D +++N++ISG+ NG E + +LF ER+ V +
Sbjct: 262 TARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHS 321
Query: 272 ----------ITGFSSKGNL--------------------EKSIELFNMMPEKDDVTWTA 301
I GF K + + + LF+ PEK V W A
Sbjct: 322 PFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNA 381
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+ISG+ N E A F EM++ + PN +T++++LSA A +L+ G +H + N
Sbjct: 382 MISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSEN 441
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+E ++ + +LV +Y+KCGN+ +A+++F ++ E+N V++N+MI G+ +G G EAL L+
Sbjct: 442 LEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYN 501
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
+M G P+ +TFLSVL AC+H GLV EG F +M Y IEP EHYACMVDILGR+
Sbjct: 502 EMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRS 561
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L +A++ I M EP P VWG LLGA H + D+A+LA++ L EL+P S YV+LS
Sbjct: 562 GQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLS 621
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
++YSV +R K +++ KSPGC+ I + H+F++G +S +I L+
Sbjct: 622 NIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLE 681
Query: 602 TISKGTKEFDW 612
++ +E +
Sbjct: 682 KLTGKMREMGY 692
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 194/416 (46%), Gaps = 44/416 (10%)
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEAC 178
AR +F +P+ ++ + +V G+ D L+ +RR ++ ++ T AC
Sbjct: 62 HARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAAC 121
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
++ + H ++ G+ ++ +G++++ +Y + + A KVF M +RD V WN
Sbjct: 122 SND-KHLMLLHAHSIID--GYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWN 178
Query: 239 SLISGYVHNGEIEEAYRLFERMP------------------------------------- 261
++I+G V N +++ +LF M
Sbjct: 179 TMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKI 238
Query: 262 GKDFVSW--TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
G F + T +I+ +S G++ + LF + D + + A+ISGF N E + + F
Sbjct: 239 GFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLF 298
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
E+L R + T+ ++ + L+ IH VK + + ++ + ++Y+K
Sbjct: 299 RELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKL 358
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ A +F E+ +V++N+MISG+ QNG E A++LF++M PN +T ++L
Sbjct: 359 NEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTIL 418
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
SAC +G + G +K+ N+EP +VD+ + G+++EA L +SM+
Sbjct: 419 SACAQLGSLSFGKWVHHLIKS-ENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS 473
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 192/481 (39%), Gaps = 98/481 (20%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R + +N MI L+ NC ++ ++F M ++ +T + E +EL
Sbjct: 169 MPERDTVLWNTMINGLV-KNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAA--ELQEL 225
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
V M + AL G+ G C D V G ++ Y K G V
Sbjct: 226 KVGMGIQCL------ALKIGF---GFC-------------DYVLTG-LISLYSKCGDVNT 262
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +F ++ +++A+ AM+ G+ E LF + G +S T+ L
Sbjct: 263 ARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSP 322
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F +HG + G + + + +Y +L +D A +F ++ V+WN++
Sbjct: 323 FGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAM 382
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITG---------------------- 274
ISGY NG E A LF+ M +F V+ TT+++
Sbjct: 383 ISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENL 442
Query: 275 -------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
++ GN+ ++ +LF+ M EK+ VTW +I G+ + EA + + E
Sbjct: 443 EPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNE 502
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
ML P+ +T SVL A + + +G +I N
Sbjct: 503 MLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFH-------------------------N 537
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+V+ YRI E I Y M+ ++G E+AL +KM E P + ++L A
Sbjct: 538 MVNKYRI-----EPLIEHYACMVDILGRSGQLEKALEFIKKMPVE---PGPAVWGTLLGA 589
Query: 442 C 442
C
Sbjct: 590 C 590
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 23/240 (9%)
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ILGNS G+L N +FS+++K A ++ L H I YR
Sbjct: 1 MILGNS----SGKL----SRNTLFSLINK--ASTFPHL--AQTHAQFILNGYRF------ 42
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
D + T + + LF +P+ D + ++ GF N+ + + +
Sbjct: 43 -DLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHL 101
Query: 323 LRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
R ++ P+ T + ++A + L +HAH + S+V + ++LV LY K
Sbjct: 102 RRNTNLSPDNFTYAFAVAACSNDKHL---MLLHAHSIIDGYGSNVFVGSALVDLYCKFSR 158
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
VV A ++F + ER+ V +N+MI+G +N ++++ LFR+M +G+ + T +VL A
Sbjct: 159 VVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPA 218
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 12/261 (4%)
Query: 14 TALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDS 71
TA+ N I A +F P + V++ AMI+G+ + G A L+ M ++
Sbjct: 352 TAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNA 411
Query: 72 VCSNALISGYLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
V ++S ++G + + +E ++ ++VD Y K G + EA ++FD
Sbjct: 412 VTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDS 471
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
M EKN V W M+ GY + L+ M G +++T + AC EG
Sbjct: 472 MSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEG 531
Query: 188 VQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLISGYV 245
++ H +V+++ + I ++ + GR G +++A + M + W +L+ +
Sbjct: 532 EEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACM 591
Query: 246 HNGEIEEAY----RLFERMPG 262
+ + + A RLFE PG
Sbjct: 592 IHKDTDIARLASERLFELDPG 612
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/471 (38%), Positives = 286/471 (60%), Gaps = 8/471 (1%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y + G++ AR++FDK+P N+ W + + +E+ F M++ G+ N L
Sbjct: 72 YTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVL 131
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ +ACG R G +H ++ + F+ D + +++I MY + G +++A +VF +
Sbjct: 132 PSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVD 191
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL 287
+D V N+++SGY +G + EA L ++M + VSW T+I GFS G+ E+
Sbjct: 192 KDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEV 251
Query: 288 FNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
F +M E D V+WT++ISGFV N E F F EML + P+ +T+SS+L A
Sbjct: 252 FRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTN 311
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
A L G +IH + + + +E DV ++++LV +Y+KCG + +A +F + ERN V++NS+
Sbjct: 312 VANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSL 371
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I G+A +G EA+ LF +M++ + +TF +VL+AC+H G+VE G F+ M+ Y
Sbjct: 372 IFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYR 431
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
IEP EHYACMVD+LGRAG L+EA DLI +M EP VWGALLGA R H N++LA++AA
Sbjct: 432 IEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAA 491
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+HL ELEP+S ++LS+LY+ G+ + +++ K ++ K PGCSWI
Sbjct: 492 EHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 542
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 130/268 (48%), Gaps = 43/268 (16%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+ +ALI Y K G E+A R+F+ +V+KD+V +MV GY + G V EA + KM
Sbjct: 162 DAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQ 221
Query: 130 ---------------------------------------EKNVVAWTAMVDGYMKVDCFE 150
E +VV+WT+++ G+++
Sbjct: 222 QAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNH 281
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+GFD F M G +S+T++ L AC R G ++HG G + D+ + ++++
Sbjct: 282 EGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALV 341
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFV 266
MY + G++ EA +F MM +R+ V+WNSLI GY ++G EA LF +M D +
Sbjct: 342 DMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHL 401
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEK 294
++T ++ S G +E LF M EK
Sbjct: 402 TFTAVLNACSHAGMVELGESLFRKMQEK 429
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 113/199 (56%), Gaps = 7/199 (3%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+++ ++ G L + +LF+ +P + W + YEEA F EM ++ +RPN
Sbjct: 68 LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPN 127
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
Q L S+L A + G +H ++K + ESD I ++L+ +YSKCG+V A R+F
Sbjct: 128 QFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD 187
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG---L 447
I ++++V N+M+SG+AQ+G EALNL +KM+ G+ PN +++ ++++ + VG +
Sbjct: 188 WIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSM 247
Query: 448 VEEGFIYFKSMKTLYNIEP 466
V E F + T +EP
Sbjct: 248 VSEVF----RLMTANGVEP 262
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T + + A L +G +HAH+V + + L+S Y++CG + +A ++F I
Sbjct: 29 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 88
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
NI + + A+ G EEAL+ F +M+ EGL PNQ S+L AC H+
Sbjct: 89 PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHL 141
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 33/278 (11%)
Query: 8 SYNAMITAL--INNNCSIYEAFEIFATMPMR-NAVSYAAMITGFVRRGMFYEAEELYVNM 64
S+N +I + + + E F + + + VS+ ++I+GFV+ +E + + M
Sbjct: 231 SWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEM 290
Query: 65 PAR--WRDSVCSNALISGYLKVGRCEEAARIFE-AMV---EKDVVAWGSMVDGYCKKGRV 118
+ SV ++L+ V I AMV EKDV ++VD Y K G +
Sbjct: 291 LDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYI 350
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EA+ +F MPE+N V W +++ GY + +LF M + +T T + AC
Sbjct: 351 SEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNAC 410
Query: 179 GR----------FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
F + +E ++ + + D++ GR G + EA +
Sbjct: 411 SHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLL---------GRAGKLSEAYDLIKA 461
Query: 229 MS-KRDAVSWNSLISGYVHNGEIE----EAYRLFERMP 261
M + D W +L+ ++G IE A LFE P
Sbjct: 462 MPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEP 499
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/648 (30%), Positives = 339/648 (52%), Gaps = 77/648 (11%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY------ 61
S N + L + + E ++F M R+ +S+ MI+ +V +GM+ EA +L+
Sbjct: 169 SLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVS 228
Query: 62 ------------VNMPARWRD-------------------SVCSNALISGYLKVGRCEEA 90
V+ A+ +D N L+ Y K G+ +EA
Sbjct: 229 GVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEA 288
Query: 91 ARIFEAMVEK--DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
+ E DVV W ++V GY K ++ +AR++FDKM E+++V+WT M+ GY++
Sbjct: 289 HGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGY 348
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
+ + +LF MR + + + L + AC + G VH + +G D LGN+
Sbjct: 349 YCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNA 408
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSW 268
++ +Y + G +D EA R FE++P K SW
Sbjct: 409 LLDLYAKCGKLD-------------------------------EALRTFEQLPCKSAASW 437
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+M+ GF G ++K+ + FN +PEKD V+W +++ +V ++ + E+F F +M +V+
Sbjct: 438 NSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVK 497
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P++ TL S+LS+ A LN G ++ ++ K + D + +L+ +Y KCG V AY I
Sbjct: 498 PDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEI 557
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
FT I E+N+ + +M++ +A G EA++L+ +M++ G+ P+ +TF+++L+AC+H GLV
Sbjct: 558 FTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLV 617
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
+EG+ YF +++ YNI P HY CMVD+LGR G L E + I M EP +W +L+
Sbjct: 618 DEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMR 677
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R+H N++LA+ A + L+E++P + +V+LS++Y+ G+ D ++VR K + K
Sbjct: 678 ACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQ 737
Query: 569 PGCSWIILKDKVHLFLAGRKSCLD----LKEIEVTL---QTISKGTKE 609
PG + I VH F+A D L++IE L Q +S T +
Sbjct: 738 PGFTMIEQNGVVHEFVASNLVSADILCMLQDIERRLLVKQELSDTTSQ 785
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 216/477 (45%), Gaps = 103/477 (21%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
R+ +N L+ Y K G+ +E ++FE M +DV++W +M+ Y KG EA ++FD+M
Sbjct: 166 RNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEM 225
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+V G + + IT+ L C + G
Sbjct: 226 ----------LVSGVLP---------------------DEITMVSLVSTCAKLKDLEMGK 254
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM--SKRDAVSWNSLISGYVH 246
++H + L N ++ MY + G MDEA+ + S S+ D V W +L+SGYV
Sbjct: 255 RLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVK 314
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+ +I++A +LF++M + VSWTTM++G+ G +S+ELF M
Sbjct: 315 SNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQM--------------- 359
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
++E +V P+++ L +VLSA + G +HA +V M D
Sbjct: 360 ----RFE------------NVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDG 403
Query: 367 SIQNSLVSLYSKCGNVVDAYR-------------------------------IFTNIDER 395
+ N+L+ LY+KCG + +A R F I E+
Sbjct: 404 FLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEK 463
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF--- 452
+IVS+N+M++ + ++ L E+ +F KM+ + P++ T +S+LS+C VG + G
Sbjct: 464 DIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVN 523
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+Y + + + G ++D+ G+ G + A ++ + E VW A++ A
Sbjct: 524 VYIEKNEIGIDAMLG----TALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAA 575
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 118/233 (50%), Gaps = 18/233 (7%)
Query: 269 TTMITGFS-SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T+ + F S NL+ + ++ + E + + W ++ + +E + M+ + V
Sbjct: 70 TSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGV 129
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+ T ++ A + GS++H ++K + S+ N+L+ LYSKCG + + +
Sbjct: 130 LLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQ 189
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + R+++S+N+MIS + G+ EAL+LF +M G++P++IT +S++S C +
Sbjct: 190 LFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKD 249
Query: 448 VEEG---FIYFKSMK-----TLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
+E G +Y K +L N C+VD+ + G + EA L++
Sbjct: 250 LEMGKRLHLYIVDNKLWIRGSLLN---------CLVDMYSKCGKMDEAHGLLS 293
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 51/100 (51%)
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ + + + S IHAH++ N+ D I + +++ N+ A++I + E + +N+
Sbjct: 44 SCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNT 103
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
++ + G +E L + M +G++ + TF ++ AC
Sbjct: 104 LLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHAC 143
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 211/646 (32%), Positives = 341/646 (52%), Gaps = 66/646 (10%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD------------SVC 73
A ++F MP RN VS+ ++I+G+ + G ++E L+ AR D SVC
Sbjct: 73 AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKE--ARMSDLRLDKFTFSNALSVC 130
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
L L++GR A I + + V+ S++D YCK GR+ AR +F+ E +
Sbjct: 131 GRTL---DLRLGRLIHAL-ITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDS 186
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR--YREGVQVH 191
V+W +++ GY+++ ++ L + M R G+ NS L +ACG F G +H
Sbjct: 187 VSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLH 246
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI- 250
G + G D D+++G +++ Y ++G +++A K+F +M + V +N++I+G++ +
Sbjct: 247 GCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMA 306
Query: 251 -----EEAYRLFE---------------------------------------RMPGKDFV 266
E Y FE + +F+
Sbjct: 307 DEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFI 366
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
++ +S G++E ++ F+ P+ D V+WT++I G V N Q+E F E+L
Sbjct: 367 G-NALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSG 425
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+P++ T+S +LSA A A + G QIHA+ +K + + IQNS + +Y+KCG++ A
Sbjct: 426 RKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSAN 485
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
F +IVS++ MIS AQ+G +EA++LF MK G+ PN ITFL VL AC+H G
Sbjct: 486 MTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGG 545
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
LVEEG YF+ MK + I P +H AC+VD+LGRAG LAEA I FE P +W +L
Sbjct: 546 LVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSL 605
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
L A R H D K A+ ++ELEP++A YV+L ++Y+ G + +R K + ++
Sbjct: 606 LSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVK 665
Query: 567 KSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
K PG SWI + + VH F+AG +S + + I V L+ + + K+ D+
Sbjct: 666 KEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDY 711
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 215/470 (45%), Gaps = 80/470 (17%)
Query: 30 FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVC--SNALISGYLKVGRC 87
+ +P+ ++V+Y ++ R G + +++M N L+ Y K G
Sbjct: 12 YLGLPL-DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGET 70
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
+ A ++F+ M +++VV+W S++ GY + G
Sbjct: 71 DVAKKLFDRMPKRNVVSWNSLISGYTQMGF------------------------------ 100
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
+ + +LF R + + T + CGR R G +H L++ G ++L N
Sbjct: 101 -YHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTN 159
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------- 260
S+I MY + G +D A VF + D+VSWNSLI+GYV G +E RL +M
Sbjct: 160 SLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNL 219
Query: 261 ---------------------PGK-------------DFVSWTTMITGFSSKGNLEKSIE 286
GK D V T ++ ++ G+LE + +
Sbjct: 220 NSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATK 279
Query: 287 LFNMMPEKDDVTWTAIISGFVN-----NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+F +MP+ + V + A+I+GF+ +E EA F EM + ++P++ T SS+L A
Sbjct: 280 IFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKAC 339
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ G QIHA + K N++SD I N+LV LYS G++ D + F + + ++VS+
Sbjct: 340 STIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWT 399
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
S+I G QNG E L LF ++ G P++ T +LSAC ++ V+ G
Sbjct: 400 SLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSG 449
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 179/406 (44%), Gaps = 25/406 (6%)
Query: 14 TALINNNCSI---YEAFEIFATMPMRNAVSYAAMITGFVRRGMF---YEAEELYVNMPAR 67
TAL++ I +A +IF MP N V Y AMI GF++ + E +Y+ +
Sbjct: 262 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 321
Query: 68 WRDSVCSNALISGYLKVGRCEEA--------ARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
R S S LK EA A+IF+ ++ D ++V+ Y G +
Sbjct: 322 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIE 381
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+ + F P+ +VV+WT+++ G+++ FE G LF + G + T++I+ AC
Sbjct: 382 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACA 441
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
+ G Q+H + G I+ NS I MY + G +D AN F D VSW+
Sbjct: 442 NLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSV 501
Query: 240 LISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
+IS +G +EA LFE M G + +++ ++ S G +E+ + F +M +
Sbjct: 502 MISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDH 561
Query: 296 DVT----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+T +A I + FI + + + S+LSA + G
Sbjct: 562 GITPNVKHSACIVDLLGRAGRLAEAESFI--MDSGFEGDPVMWRSLLSACRVHKATDTGK 619
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
++ V+++ E+ S L ++Y+ G + A I + +R +
Sbjct: 620 RVAERVIELEPEAAASYV-LLYNIYNDAGIQMPATEIRNLMKDRGV 664
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/471 (38%), Positives = 285/471 (60%), Gaps = 8/471 (1%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y + G++ AR++FDK+P N+ W + + +E+ F M++ G+ N L
Sbjct: 848 YTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVL 907
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ +ACG R G +H ++ + F+ D + +++I MY + G +++A +VF +
Sbjct: 908 PSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVD 967
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL 287
+D V N+++SGY +G + EA L ++M + VSW T+I GFS G+ E+
Sbjct: 968 KDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEV 1027
Query: 288 FNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
F +M E D V+WT++ISGFV N E F F EML + P+ +T+SS+L A
Sbjct: 1028 FRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTN 1087
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
A L G +IH + + + +E DV ++++LV +Y+KCG + +A +F + ERN V++NS+
Sbjct: 1088 VANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSL 1147
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I G+A +G EA+ LF +M++ + +TF +VL+AC+H G+VE G F M+ Y
Sbjct: 1148 IFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYR 1207
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
IEP EHYACMVD+LGRAG L+EA DLI +M EP VWGALLGA R H N++LA++AA
Sbjct: 1208 IEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAA 1267
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+HL ELEP+S ++LS+LY+ G+ + +++ K ++ K PGCSWI
Sbjct: 1268 EHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 1318
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 185/582 (31%), Positives = 316/582 (54%), Gaps = 45/582 (7%)
Query: 87 CEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
C E R + V K D S++D Y K G V A ++DKM + ++
Sbjct: 128 CVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLIS 187
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
Y + F F +F+ + G N T + + CG +EG Q+H V + +
Sbjct: 188 AYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLS 247
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM- 260
+ +GN+++T+Y + G M+EA VF + +R+ +SW + I+G+ +G+ ++A + F M
Sbjct: 248 ETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMR 307
Query: 261 -----PG--------------KDFVSW-------------------TTMITGFSSKGNLE 282
P KDF+ T +I +S G ++
Sbjct: 308 ESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMD 367
Query: 283 KSIELFNMMPEK-DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
++ + F M +V+W A+I+G+V NE+ E+A F M+++DV N+ T S++ A
Sbjct: 368 EAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKAC 427
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
++ +L QIH+ ++K N+ES++ + +SL+ Y++CG++ +A ++FT I + ++VS+N
Sbjct: 428 SSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWN 487
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
S+I ++QNG +A+ L RKM +EG P TFL+VLSAC+H GLV+EG +FKSM
Sbjct: 488 SIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQD 547
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y+I+P H +CMVDILGRAG L A+D I +T +P +W LL A R + NL +A+
Sbjct: 548 YSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEY 607
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
A+ +++LEP+ AT YV LS++Y+ +G+ D R + K I K PGCSWI + +K++
Sbjct: 608 VAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMY 667
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLE 623
F + K+ ++ ++ L+ + + ++ + ++L E
Sbjct: 668 KFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPE 709
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 131/268 (48%), Gaps = 43/268 (16%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+ +ALI Y K G E+A R+F+ +V+KD+V +MV GY + G V EA ++ KM
Sbjct: 938 DAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQ 997
Query: 130 ---------------------------------------EKNVVAWTAMVDGYMKVDCFE 150
E +VV+WT+++ G+++
Sbjct: 998 QAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNH 1057
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+GFD F M G +S+T++ L AC R G ++HG G + D+ + ++++
Sbjct: 1058 EGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALV 1117
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFV 266
MY + G++ EA +F MM +R+ V+WNSLI GY ++G EA LF +M D +
Sbjct: 1118 DMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHL 1177
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEK 294
++T ++ S G +E LF M EK
Sbjct: 1178 TFTAVLNACSHAGMVELGESLFXKMQEK 1205
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 113/199 (56%), Gaps = 7/199 (3%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+++ ++ G L + +LF+ +P + W + YEEA F EM ++ +RPN
Sbjct: 844 LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPN 903
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
Q L S+L A + G +H ++K + ESD I ++L+ +YSKCG+V A R+F
Sbjct: 904 QFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD 963
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG---L 447
I ++++V N+M+SG+AQ+G EALBL +KM+ G+ PN +++ ++++ + VG +
Sbjct: 964 WIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSM 1023
Query: 448 VEEGFIYFKSMKTLYNIEP 466
V E F + T +EP
Sbjct: 1024 VSEVF----RLMTANGVEP 1038
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 210/477 (44%), Gaps = 65/477 (13%)
Query: 6 SASYNAMITALINNNCSIYEAFEI-FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+A NA++T + + C + E EI F ++ RN +S+ A I GF + G F +A + + M
Sbjct: 249 TAVGNALLT--LYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMM 306
Query: 65 ------PARWRDSV------CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG-----S 107
P + S+ C I G R+F V K +A G +
Sbjct: 307 RESGIEPNEFTFSIVLASCGCVKDFIDG-----------RMFHTQVIKKGMASGVFVGTA 355
Query: 108 MVDGYCKKGRVIEAREIFDKMPE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
++D Y G + EA + F +M + V+W A++ GY+ + E + F M + +A
Sbjct: 356 IIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVAC 415
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
N T + +F+AC F VQ+H + + + ++ + +S+I Y + G ++ A +VF
Sbjct: 416 NEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVF 475
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--PGKDFVSWT--TMITGFSSKGNLE 282
+ +S D VSWNS+I Y NG+ +A L +M G S T T+++ S G ++
Sbjct: 476 TQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQ 535
Query: 283 KSIELFNMM-------PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ E F M PE+ + I G Q E A FI+ L ++P
Sbjct: 536 EGQEFFKSMVQDYSIQPEETHCSCMVDILGRAG--QLENALD-FIKKL--TMKPTASIWR 590
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+L+A + L + ++ + +D ++ +L ++Y++ G DA ++++
Sbjct: 591 PLLAACRYNSNLQMAEYVAEKILDLE-PNDATVYVTLSNMYAEVGRWADAENQRRLMEQK 649
Query: 396 NIVSY---------NSMISGFAQN-------GLGEEALNLFRKMKDEGLVPNQITFL 436
I N M F+ + + E+ L R+++D G P T L
Sbjct: 650 EISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVL 706
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 33/278 (11%)
Query: 8 SYNAMITAL--INNNCSIYEAFEIFATMPMR-NAVSYAAMITGFVRRGMFYEAEELYVNM 64
S+N +I + + + E F + + + VS+ ++I+GFV+ +E + + M
Sbjct: 1007 SWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEM 1066
Query: 65 PAR--WRDSVCSNALISGYLKVGRCEEAARIFE-AMV---EKDVVAWGSMVDGYCKKGRV 118
+ SV ++L+ V I AMV EKDV ++VD Y K G +
Sbjct: 1067 LDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYI 1126
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EA+ +F MPE+N V W +++ GY + +LF M + +T T + AC
Sbjct: 1127 SEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNAC 1186
Query: 179 GR----------FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
F + +E ++ + + D++ GR G + EA +
Sbjct: 1187 SHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLL---------GRAGKLSEAYDLIKA 1237
Query: 229 MS-KRDAVSWNSLISGYVHNGEIE----EAYRLFERMP 261
M + D W +L+ ++G IE A LFE P
Sbjct: 1238 MPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEP 1275
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T + + A L +G +HAH+V + + L+S Y++CG + +A ++F I
Sbjct: 805 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
NI + + A+ G EEAL+ F +M+ EGL PNQ S+L AC H+
Sbjct: 865 PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHL 917
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 204/623 (32%), Positives = 334/623 (53%), Gaps = 51/623 (8%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNA---LIS 79
+F + RN VS+ A+ + +V+ + EA L+ M P + S+ NA L
Sbjct: 139 LFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQE 198
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
G L GR + + + ++ D + ++VD Y K G + A +F + +VV+W A+
Sbjct: 199 GDL--GR-KIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAI 255
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ G + DC + L M+ G N TL+ +AC G Q+H + +
Sbjct: 256 IAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDA 315
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D+ ++ MY + MD+A + + M K+D ++WN+LISGY G+ +A LF +
Sbjct: 316 HSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSK 375
Query: 260 MPGKD---------------------------------------FVSWTTMITGFSSKGN 280
M +D F +++ + +
Sbjct: 376 MFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNH 435
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
++++ ++F +D V +T++I+ + EEA + +++M D++P+ SS+L+A
Sbjct: 436 IDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNA 495
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A + QG Q+H H +K D+ NSLV++Y+KCG++ DA R F+ I R IVS+
Sbjct: 496 CANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSW 555
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
++MI G+AQ+G G+EAL LF +M +G+ PN IT +SVL ACNH GLV EG YF+ M+
Sbjct: 556 SAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEV 615
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
++ I+P EHYACM+D+LGR+G L EA++L+NS+ FE VWGALLGA R H N++L +
Sbjct: 616 MFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQ 675
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
AA+ L +LEP+ + +V+L+++Y+ G + +VR K +++K PG SWI +KDKV
Sbjct: 676 KAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKV 735
Query: 581 HLFLAGRKSCLDLKEIEVTLQTI 603
+ F+ G +S EI L +
Sbjct: 736 YTFIVGDRSHSRSDEIYAKLDQL 758
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 249/526 (47%), Gaps = 55/526 (10%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALISGYLKVGRCEE 89
+ VS++++++G+V+ G EA ++ M SV + L +GR
Sbjct: 46 DVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVH 105
Query: 90 AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
+ E D ++V Y K G + ++R +F + E+NVV+W A+ Y++ +
Sbjct: 106 GMAVVTGF-ESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELC 164
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
+ LF M R G+ N +++I+ AC G ++HGL+ + G D D N++
Sbjct: 165 GEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANAL 224
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG------- 262
+ MY + G ++ A VF ++ D VSWN++I+G V + + A L + M G
Sbjct: 225 VDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNM 284
Query: 263 --------------------------------KDFVSWTTMITGFSSKGNLEKSIELFNM 290
D + ++ +S ++ + ++
Sbjct: 285 FTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDS 344
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP+KD + W A+ISG+ + +A F +M +D+ NQ TLS+VL + A+ +
Sbjct: 345 MPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVC 404
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
QIH +K + SD + NSL+ Y KC ++ +A +IF ++V+Y SMI+ ++Q
Sbjct: 405 KQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQY 464
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPE 469
G GEEAL L+ +M+D + P+ S+L+AC ++ E+G ++ ++K + +
Sbjct: 465 GDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFAS 524
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTH 513
+ +V++ + GS+ +A + + P G+ W A++G H
Sbjct: 525 N--SLVNMYAKCGSIEDADRAFSEI---PNRGIVSWSAMIGGYAQH 565
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 214/474 (45%), Gaps = 83/474 (17%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
RD N L++ Y K R A ++ + E DVV+W S++ GY + G V EA +F++M
Sbjct: 14 RDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEM 73
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
C G+ N T + +AC G
Sbjct: 74 -------------------CLL------------GVKCNEFTFPSVLKACSMKRDLNMGR 102
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+VHG+ GF+ D + N+++ MY + G +D++ ++F + +R+ VSWN+L S YV +
Sbjct: 103 KVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSE 162
Query: 249 EIEEAYRLFER------MPGK---------------------------------DFVSWT 269
EA LF+ MP + D S
Sbjct: 163 LCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSAN 222
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
++ +S G +E ++ +F + D V+W AII+G V ++ + A EM RP
Sbjct: 223 ALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRP 282
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N TLSS L A AA G Q+H+ ++KM+ SD+ LV +YSKC + DA R +
Sbjct: 283 NMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAY 342
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
++ +++I+++N++ISG++Q G +A++LF KM E + NQ T +VL + + +
Sbjct: 343 DSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAI- 401
Query: 450 EGFIYFKSMKTLYNIEPGPEHYA------CMVDILGRAGSLAEAIDLINSMTFE 497
K K ++ I Y+ ++D G+ + EA + T+E
Sbjct: 402 ------KVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWE 449
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 151/303 (49%), Gaps = 39/303 (12%)
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+++H + +FGF D L N ++T+Y + A K+ S+ D VSW+SL+SGYV N
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 248 GEIEEAYRLFERM------------PG--------KDF-----VSWTTMITGFSSKGN-- 280
G +EEA +F M P +D V ++TGF S G
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 281 ------------LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
L+ S LF + E++ V+W A+ S +V +E EA F EM+R +
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN+ ++S +L+A A + G +IH ++KM ++ D N+LV +YSK G + A +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F +I ++VS+N++I+G + + AL L +MK G PN T S L AC +G
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300
Query: 449 EEG 451
E G
Sbjct: 301 ELG 303
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 184/400 (46%), Gaps = 56/400 (14%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
D S NA++ + + I A +F + + VS+ A+I G V ++ +L +
Sbjct: 215 DLDQFSANALVD-MYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCV----LHDCNDLAL 269
Query: 63 NMPARWRDS-------VCSNALIS----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
+ + S S+AL + G+ ++GR + + + + D+ A +VD
Sbjct: 270 MLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGR-QLHSSLIKMDAHSDLFAAVGLVDM 328
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K + +AR +D MP+K+++AW A++ GY + D LF M + FN TL
Sbjct: 329 YSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTL 388
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ + ++ + Q+H + + G D + NS++ YG+ +DEA+K+F +
Sbjct: 389 STVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTW 448
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGK-- 263
D V++ S+I+ Y G+ EEA +L+ +M GK
Sbjct: 449 EDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQL 508
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D + +++ ++ G++E + F+ +P + V+W+A+I G+ +
Sbjct: 509 HVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHG 568
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+EA R F +MLR V PN +TL SVL A +N+G Q
Sbjct: 569 KEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQ 608
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 140/268 (52%), Gaps = 9/268 (3%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
++T +S + +L + E D V+W++++SG+V N EEA F EM V+ N
Sbjct: 22 LVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCN 81
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ T SVL A + LN G ++H V ESD + N+LV +Y+KCG + D+ R+F
Sbjct: 82 EFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFG 141
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
I ERN+VS+N++ S + Q+ L EA+ LF++M G++PN+ + +L+AC GL +E
Sbjct: 142 GIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNAC--AGL-QE 198
Query: 451 GFIYFKSMKTLYNIEPGPEHYA--CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
G + K + + + ++ +VD+ +AG + A+ + + P W A++
Sbjct: 199 GDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA-HPDVVSWNAIIA 257
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATP 536
H D LA L E++ P
Sbjct: 258 GCVLH---DCNDLALMLLDEMKGSGTRP 282
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 150/326 (46%), Gaps = 47/326 (14%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR---WRDSVCSNAL--IS 79
+A + +MP ++ +++ A+I+G+ + G +A L+ M + + + S L ++
Sbjct: 337 DARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVA 396
Query: 80 GYLKVGRCEEAARI-FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+ C++ I ++ + D S++D Y K + EA +IF++ +++VA+T+
Sbjct: 397 SLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTS 456
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ Y + E+ L+L M+ + + + L AC Y +G Q+H +FG
Sbjct: 457 MITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFG 516
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
F DI NS++ MY + G +++A++ FS + R VSW+++I GY +G +EA RLF
Sbjct: 517 FMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFN 576
Query: 259 RM--------------------------PGKDFVS--------------WTTMITGFSSK 278
+M GK + + MI
Sbjct: 577 QMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRS 636
Query: 279 GNLEKSIELFNMMP-EKDDVTWTAII 303
G L +++EL N +P E D W A++
Sbjct: 637 GKLNEAVELVNSIPFEADGFVWGALL 662
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/641 (31%), Positives = 345/641 (53%), Gaps = 70/641 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S++A+I+ L+ + E+ F P +N VS+ A I+GFVR G+ +EA +L
Sbjct: 113 MPERNEVSWSALISGLMKYG-RVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKL 171
Query: 61 YVNM---PARWRD-------SVC---------------------------SNALISGYLK 83
+ + R D C SN+LI+ L+
Sbjct: 172 FFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLR 231
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
+G + A R+F+ M ++DVV+W +++D Y + G + EAR IFD+MPE+N ++W+AM+ Y
Sbjct: 232 MGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARY 291
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
+ E+ LF M + G N A G+ +HG V++ G D D+
Sbjct: 292 SQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDV 351
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+G+S+I +Y + G D+ V F+ + K
Sbjct: 352 FIGSSLIDLYCKCGKPDDGRLV-------------------------------FDLILEK 380
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ V W +M+ G+S G LE+ ELF ++PEK+D +W IJ+G++ NEQ E+ F +L
Sbjct: 381 NVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLL 440
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
PN+ T SSVL A A+ A+L++G +H ++K+ ++ D+ + +L +Y+KCG++
Sbjct: 441 VSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIG 500
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSAC 442
+ ++F + E+N +S+ MI G A++G E+L LF +M + + PN++ LSVL AC
Sbjct: 501 SSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFAC 560
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLV++G YF SM+ +Y I+P +HY C+VD+L R+G L EA + I ++ F+P
Sbjct: 561 SHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANA 620
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W ALL + + + +A+ A+ L +L +++ YV+LS++Y+ G+ D + +R +
Sbjct: 621 WAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMRE 680
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K ++KS GCSW+ ++++VH F + S EI TLQ +
Sbjct: 681 KGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLL 721
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 231/459 (50%), Gaps = 69/459 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V SN +IS Y++ G +A +F+ M E++ V+W +++ G K GRV E+ F++ P
Sbjct: 86 DLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNP 145
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+NVV+WTA + G+++ + LF + G+ N +T T + ACG + G+
Sbjct: 146 FQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMS 205
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+ GLV + GF++ + + NS+IT+ R+G +D A +VF M KRD VSW +++ YV G+
Sbjct: 206 ILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGD 265
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+ EA R+F+ MP ++ +SW+ MI +S G E++++LF+
Sbjct: 266 LREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFS-------------------- 305
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
+M+++ +PN + LSA A+ L+ G IH HV K+ ++ DV I
Sbjct: 306 -----------KMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIG 354
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG---------------- 413
+SL+ LY KCG D +F I E+N+V +NSM+ G++ NG
Sbjct: 355 SSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDX 414
Query: 414 ---------------EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKS 457
E+ L +F + G PN+ TF SVL AC + +++G ++ K
Sbjct: 415 SWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKI 474
Query: 458 MK--TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+K Y+I G + D+ + G + + + M
Sbjct: 475 IKLGIQYDIFVG----TALTDMYAKCGDIGSSKQVFERM 509
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 164/355 (46%), Gaps = 33/355 (9%)
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+G +H + + GF + ++ +Y E +++ D V N +IS YV
Sbjct: 39 QGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYV 98
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
G + +A LF+ MP ++ VSW+ +I+G G +E+S+ F P ++ V+WTA ISG
Sbjct: 99 QWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISG 158
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
FV N EA + F +L VRPN +T +SV+ A G I VVK E
Sbjct: 159 FVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHY 218
Query: 366 VSIQNSLVSL-------------------------------YSKCGNVVDAYRIFTNIDE 394
+S+ NSL++L Y + G++ +A RIF + E
Sbjct: 219 LSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
RN +S+++MI+ ++Q+G EEAL LF KM EG PN F LSA + + G I
Sbjct: 279 RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAG-IN 337
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
T I+ + ++D+ + G + L+ + E W +++G
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDLILEKNVVCWNSMVGG 391
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 326/571 (57%), Gaps = 41/571 (7%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L+ GR E A I ++ ++ + +++ Y K G + +AR +FD + ++N+V+WTAM++
Sbjct: 63 LEQGR-EVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIE 121
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
++ + + F + +M+ G + +T L A + G +VH + G +
Sbjct: 122 AFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLEL 181
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+ +G S++ MY + G + +A +F + +++ V+W LI+GY G+++ A L E M
Sbjct: 182 EPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQ 241
Query: 262 ---------------------------------------GKDFVSWTTMITGFSSKGNLE 282
G++ ++IT + G LE
Sbjct: 242 QAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLE 301
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
++ +LF+ +P +D VTWTA+++G+ ++EA F M ++ ++P+++T +SVL++ +
Sbjct: 302 EARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCS 361
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ A L +G +IH +V DV +Q++LVS+Y+KCG++ DA +F + ERN+V++ +
Sbjct: 362 SPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTA 421
Query: 403 MISGF-AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+I+G AQ+G EAL F +MK +G+ P+++TF SVLSAC HVGLVEEG +F+SM
Sbjct: 422 IITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLD 481
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I+P EHY+C VD+LGRAG L EA ++I SM F P P VWGALL A R H +++ +
Sbjct: 482 YGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGER 541
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA+++++L+PD YV LS +Y+ G+ D +VR + + + K PG SWI + KVH
Sbjct: 542 AAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVH 601
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+F KS + ++I V L +++ KE +
Sbjct: 602 VFHVEDKSHPESEQIYVELGKLTEQIKEMGY 632
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 198/362 (54%), Gaps = 42/362 (11%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L + C R +G +VH + + G + L N++++MY + G + +A +VF + R+
Sbjct: 53 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRN 112
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM------PGK-DFVSW------------------ 268
VSW ++I +V + EA++ +E M P K FVS
Sbjct: 113 IVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHM 172
Query: 269 --------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
T+++ ++ G++ K+ +F+ +PEK+ VTWT +I+G+ Q +
Sbjct: 173 EIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDV 232
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A M + +V PN++T +S+L A L G ++H ++++ ++ + NSL++
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLIT 292
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y KCG + +A ++F+++ R++V++ +M++G+AQ G +EA+NLFR+M+ +G+ P+++T
Sbjct: 293 MYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMT 352
Query: 435 FLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
F SVL++C+ ++EG I+ + + YN++ + + +V + + GS+ +A + N
Sbjct: 353 FTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ--SALVSMYAKCGSMDDASLVFNQ 410
Query: 494 MT 495
M+
Sbjct: 411 MS 412
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/532 (23%), Positives = 231/532 (43%), Gaps = 115/532 (21%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAE 58
DR S+ AMI A + N ++ EAF+ + TM + + V++ +++ F + +
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNL-EAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQ 168
Query: 59 ELYVNM--PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
++++ + + +L+ Y K G +A IF+ + EK+VV W ++ GY ++G
Sbjct: 169 KVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQG 228
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
+V A E+ + M + V A N IT + +
Sbjct: 229 QVDVALELLETMQQAEV-------------------------------APNKITFASILQ 257
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
C G +VH + + G+ ++ + NS+ITMY + G ++EA K+FS + RD V+
Sbjct: 258 GCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVT 317
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSK-------------- 278
W ++++GY G +EA LF RM + D +++T+++T SS
Sbjct: 318 WTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLV 377
Query: 279 ---------------------GNLEKSIELFNMMPEKDDVTWTAIISG-FVNNEQYEEAF 316
G+++ + +FN M E++ V WTAII+G + + EA
Sbjct: 378 HAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREAL 437
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
+F +M ++ ++P+++T +SVLSA + +G + H M ++ +
Sbjct: 438 EYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK---HFRSMYLDYGIK--------- 485
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+V+ Y F ++ + G EEA N+ M +P +
Sbjct: 486 ----PMVEHYSCFVDL--------------LGRAGHLEEAENVILSMP---FIPGPSVWG 524
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE-HYACMVDILGRAGSLAEA 487
++LSAC VE G ++ + + ++P + Y + I AG +A
Sbjct: 525 ALLSACRVHSDVERG---ERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDA 573
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 180/390 (46%), Gaps = 53/390 (13%)
Query: 26 AFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEEL--YVNMPARWRDSVCSNALIS 79
A E+ TM N +++A+++ G +++ Y+ R+ N+LI+
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLIT 292
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
Y K G EEA ++F + +DVV W +MV GY + G
Sbjct: 293 MYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLG----------------------- 329
Query: 140 VDGYMKVDCFED-GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
F D +LF M++ G+ + +T T + +C +EG ++H + G
Sbjct: 330 ---------FHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAG 380
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG-YVHNGEIEEAYRLF 257
++ D+ L +++++MY + G MD+A+ VF+ MS+R+ V+W ++I+G +G EA F
Sbjct: 381 YNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYF 440
Query: 258 ERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVN 308
++M + D V++T++++ + G +E+ + F M + ++ +
Sbjct: 441 DQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGR 500
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
EEA + M P ++LSA + + +G + +V+K++ + D
Sbjct: 501 AGHLEEAENVILSM---PFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDD-GA 556
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+L S+Y+ G DA ++ +++R++V
Sbjct: 557 YVALSSIYAAAGRYEDAEKVRQVMEKRDVV 586
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 119/236 (50%), Gaps = 6/236 (2%)
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
+S + +EA M+ + R +L A +L QG ++HA ++K +
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+ + ++N+L+S+Y+KCG++ DA R+F +I +RNIVS+ +MI F EA +
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRA 481
MK G P+++TF+S+L+A + L++ G ++ + ++ +E P +V + +
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELE--PRVGTSLVGMYAKC 196
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLG--AGRTHLNLDLAKLAAQHLMELEPDSAT 535
G +++A + + + E W L+ A + +++ L L E+ P+ T
Sbjct: 197 GDISKARVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKIT 251
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 206/636 (32%), Positives = 347/636 (54%), Gaps = 53/636 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI--- 78
SI+EA E+F M ++ VS+ +I G+ G A E++ M ++ V N +
Sbjct: 294 SIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQ---QEGVVPNRITYIN 350
Query: 79 -------SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
LK G+ + I A E D+ ++V Y K G + R++F+K+ +
Sbjct: 351 VLNAFSGPAALKWGKTVHS-HILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNR 409
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+++AW M+ G + +E+ +++ M+R GM N IT IL AC G ++H
Sbjct: 410 DLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIH 469
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
V + GF +DI + N++I+MY R G + +A +F+ M ++D +SW ++I G +G
Sbjct: 470 SRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGA 529
Query: 252 EAYRLFERMPGKDF----VSWTTMITGFSSK----------------------------- 278
EA +F+ M V++T+++ SS
Sbjct: 530 EALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLV 589
Query: 279 ------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
G+++ + ++F+ M ++D V + A+I G+ + +EA + F + + ++P+++
Sbjct: 590 NMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKV 649
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T ++L+A A + +L +IH+ V+K SD S+ N+LVS Y+KCG+ DA +F +
Sbjct: 650 TYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM 709
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+RN++S+N++I G AQ+G G++ L LF +MK EG+ P+ +TF+S+LSAC+H GL+EEG
Sbjct: 710 MKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGR 769
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
YF SM + I P EHY CMVD+LGRAG L E LI +M F+ +WGALLGA R
Sbjct: 770 RYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRI 829
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H N+ +A+ AA+ ++L+PD+A YV LS +Y+ G ++R + + + K PG S
Sbjct: 830 HGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRS 889
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
WI + DK+H F+A +S + ++I L ++ K
Sbjct: 890 WIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMK 925
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 173/599 (28%), Positives = 303/599 (50%), Gaps = 57/599 (9%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATM--PMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
+ NA+I I SI EA +++ + R S+ AM+ G+V+ G EA +L M
Sbjct: 178 TVNALINMYIQCG-SIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQ 236
Query: 66 ----ARWRDS---VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
A R + + S+ L+ GR E +A + DV +++ Y K G +
Sbjct: 237 QHGLALGRATTMRLLSSCKSPSALECGR-EIHVEAMKARLLFDVNVANCILNMYAKCGSI 295
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EARE+FDKM K+VV+WT ++ GY E F++F M++ G+ N IT + A
Sbjct: 296 HEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAF 355
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ G VH + G + D+ +G +++ MY + G + +VF + RD ++WN
Sbjct: 356 SGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWN 415
Query: 239 SLISGYVHNGEIEEAYRLFER------MPGK----------------------------- 263
++I G G EEA ++ + MP K
Sbjct: 416 TMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKD 475
Query: 264 ----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
D +I+ ++ G+++ + LFN M KD ++WTA+I G + EA F
Sbjct: 476 GFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVF 535
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+M + ++PN++T +S+L+A ++ A L+ G +IH V++ + +D + N+LV++YS C
Sbjct: 536 QDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMC 595
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G+V DA ++F + +R+IV+YN+MI G+A + LG+EAL LF ++++EGL P+++T++++L
Sbjct: 596 GSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINML 655
Query: 440 SACNHVGLVE-EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
+AC + G +E I+ +K Y + + +V + GS ++A+ + + M +
Sbjct: 656 NACANSGSLEWAKEIHSLVLKDGYLSDTSLGN--ALVSTYAKCGSFSDALLVFDKM-MKR 712
Query: 499 PPGVWGALLGAGRTH-LNLDLAKLAAQHLME-LEPDSATPYVVLSDLYSVIGKKRDGNR 555
W A++G H D+ +L + ME ++PD T +V L S G +G R
Sbjct: 713 NVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVT-FVSLLSACSHAGLLEEGRR 770
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 235/512 (45%), Gaps = 85/512 (16%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAM--VEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
D NALI+ Y++ G EEA +++ + E+ V +W +MV GY + G +
Sbjct: 175 DQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYI--------- 225
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
E+ L M++ G+A T L +C G
Sbjct: 226 ----------------------EEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECG 263
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++H + +D+ + N I+ MY + G + EA +VF M + VSW +I GY
Sbjct: 264 REIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADC 323
Query: 248 GEIEEAYRLFERM------PGK---------------------------------DFVSW 268
G E A+ +F++M P + D
Sbjct: 324 GHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVG 383
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T ++ ++ G+ + ++F + +D + W +I G +EEA + +M R+ +
Sbjct: 384 TALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMM 443
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN++T +L+A L+ G +IH+ VVK D+S+QN+L+S+Y++CG++ DA +
Sbjct: 444 PNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLL 503
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + ++I+S+ +MI G A++GLG EAL +F+ M+ GL PN++T+ S+L+AC+ +
Sbjct: 504 FNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAAL 563
Query: 449 EEGFIYFKSMKTLYNIEPG---PEHYA-CMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
+ G + + IE G H A +V++ GS+ +A + + MT + +
Sbjct: 564 DWGRRIHQQV-----IEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMT-QRDIVAYN 617
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
A++G H +L K A + L+ + P
Sbjct: 618 AMIGGYAAH---NLGKEALKLFDRLQEEGLKP 646
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 231/488 (47%), Gaps = 79/488 (16%)
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
D+ +++ G NS + + C G +VH + + D N++I
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184
Query: 212 MYGRLGFMDEANKVFSMM--SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--GKDFVS 267
MY + G ++EA +V++ + ++R SWN+++ GYV G IEEA +L M G
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244
Query: 268 WTTM-------------------------------------ITGFSSKGNLEKSIELFNM 290
TTM + ++ G++ ++ E+F+
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M K V+WT II G+ + E AF F +M ++ V PN++T +VL+A + A L G
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
+H+H++ ESD+++ +LV +Y+KCG+ D ++F + R+++++N+MI G A+
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 424
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----------HVGLVEEGFIY----- 454
G EEA ++ +M+ EG++PN+IT++ +L+AC H +V++GF++
Sbjct: 425 GNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQ 484
Query: 455 ------------FKSMKTLYN--IEPGPEHYACMVDILGRAGSLAEAIDLINSMT---FE 497
K + L+N + + M+ L ++G AEA+ + M +
Sbjct: 485 NALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLK 544
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLSDLYSVIGKKRDGNR 555
P + ++L A + LD + Q ++E L D+ L ++YS+ G +D +
Sbjct: 545 PNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVAN-TLVNMYSMCGSVKDARQ 603
Query: 556 V--RMKKK 561
V RM ++
Sbjct: 604 VFDRMTQR 611
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 305/532 (57%), Gaps = 9/532 (1%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
LK + A + E+ V ++ Y + G A ++FD++ + N WT+++
Sbjct: 15 LKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIH 74
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD- 200
GY++ +++ F LF+ MRR ++ + T++ + +A R R++ G V+G F FD
Sbjct: 75 GYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYG----FAFDE 130
Query: 201 ---YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
DI+ N +I+ YG +D A K F M +R+ VSW S+I GYV G++ EA LF
Sbjct: 131 MCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLF 190
Query: 258 ERMPGKDFVSWTTMITGFSSKGNLEKSIE-LFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
+ MP KD SW M++G+ G+ LF+ MP K+ VTW+ +I G+ N Q +A
Sbjct: 191 DSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKAL 250
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
F +D++P++ + ++SA + ++ I + V ++ SD+ + SL+ +Y
Sbjct: 251 ELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMY 310
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+KCG++ A ++F ++++ Y++MI+ A +GLG +A+ LF KM+ + P+ +TFL
Sbjct: 311 AKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFL 370
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
VL+ACNH GLV+EG YFK M + I+P +HYAC+VD+LGR G L EA +LI +M
Sbjct: 371 GVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPI 430
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
P VWGALL A R H N+ LA++AA L ++EPD++ Y++LS++Y+ G+ +V
Sbjct: 431 APHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKV 490
Query: 557 RMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
R K + R+RK+ G SWI L VH F+ G S D I + L + + K
Sbjct: 491 RAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILYLLCEDMK 542
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 191/437 (43%), Gaps = 100/437 (22%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
+D V N +ISGY R + A + F+ M E++VV+W SM+ GY K G + EA+ +FD M
Sbjct: 134 KDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSM 193
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFD-LFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
P K++ +W MV GYM + + +G LF M N +T + + G + R +
Sbjct: 194 PVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMK----NLVTWSTMI---GGYARNGQP 246
Query: 188 VQVHGLVSRF-----GFDYDIILGNSIITMYGRLGFMDEANKVF------SMMSKRDAVS 236
++ L RF D ILG II+ +LG +D A + S++S D
Sbjct: 247 LKALELFERFKEQDIKPDETFILG--IISACSQLGIIDAAESIIHNYVGPSLLS--DLRV 302
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
+ SLI Y G IE+A ++FE KD + ++TMI ++ G +I LF+
Sbjct: 303 FTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFD------- 355
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+M R +++P+ +T VL+A +++G +
Sbjct: 356 ------------------------KMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQ 391
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
M + IQ S E++ Y ++ + G EEA
Sbjct: 392 -----MTEEFGIQPS----------------------EKH---YACVVDLLGRVGCLEEA 421
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACN---HVGLVEEGFIYFKSMKTLYNIEP-GPEHYA 472
NL R M + P+ + + ++L+AC +V L E + L+ IEP +Y
Sbjct: 422 YNLIRNMP---IAPHSVVWGALLAACRVHCNVQLAE------VAAAELFKIEPDNSGNYI 472
Query: 473 CMVDIL---GRAGSLAE 486
+ +I GR GS+A+
Sbjct: 473 LLSNIYAAAGRWGSVAK 489
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 146/301 (48%), Gaps = 43/301 (14%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M ++ S+N MI+ NN+ + A + F MP RN VS+ +MI G+V+ G EA+ L
Sbjct: 131 MCEKDIVSWNMMISGYGNND-RVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVL 189
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAAR-IFEAMVEKDVVAWGSMVDGYCKKGRVI 119
+ +MP +D N ++SGY+ +G AR +F+ M K++V W +M+ GY + G+ +
Sbjct: 190 FDSMPV--KDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPL 247
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+A E+F++ E+++ + G + AC
Sbjct: 248 KALELFERFKEQDIKPDETFILG-------------------------------IISACS 276
Query: 180 RF--FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
+ E + +H V D+ + S+I MY + G +++A ++F M +D + +
Sbjct: 277 QLGIIDAAESI-IHNYVGP-SLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCY 334
Query: 238 NSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
+++I+ ++G +A LF++M D V++ ++T + G +++ + F M E
Sbjct: 335 STMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTE 394
Query: 294 K 294
+
Sbjct: 395 E 395
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 226/647 (34%), Positives = 347/647 (53%), Gaps = 53/647 (8%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARW 68
NAM++ L+ + A+++FA MP R+ S+ M+ G+ + G EA +LY M A
Sbjct: 133 NAMLSMLVRFG-ETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGA 191
Query: 69 RDSV----CSNALISGY--LKVGRCEEAARI--FEAMVEKDVVAWGSMVDGYCKKGRVIE 120
R V C G L +GR E A + F VE DV+ ++V Y K G V
Sbjct: 192 RPDVYTFPCVLRSCGGVPDLTMGR-EVHAHVLRFGLGVEVDVL--NALVTMYAKCGDVEA 248
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD M + ++W AM+ G+ + E G +LFL M + N +T+T + A G
Sbjct: 249 ARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGL 308
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
++H L + GF D+ NS+I MY LG M EA VFS M RDA+SW ++
Sbjct: 309 LSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAM 368
Query: 241 ISGYVHNGEIEEAY-----------------------------------RLFERMPGKDF 265
ISGY NG ++A +L E K F
Sbjct: 369 ISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGF 428
Query: 266 VSW----TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+ + ++ ++ +EK+IE+F MP+KD ++W+++I+GF N + EA +F
Sbjct: 429 IRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRH 488
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
ML DV+PN +T + L+A AAT +L G +IHAHV++ + S+ + N+L+ LY KCG
Sbjct: 489 ML-ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQ 547
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
A+ F +++VS+N M++GF +G G+ AL+ F +M + G P+++TF+++L
Sbjct: 548 TGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCG 607
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C+ G+V +G+ F SM Y+I P +HYACMVD+L R G L E + IN M P
Sbjct: 608 CSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAA 667
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VWGALL R H N++L +LAA+ ++ELEP+ A +V+LSDLY+ G + ++VR +
Sbjct: 668 VWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMR 727
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+K + GCSW+ +K +H FL +S +KEI L I + K
Sbjct: 728 VKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMK 774
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 39/300 (13%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
LF C G++ G + + LGN++++M R G A KVF+ M +RD
Sbjct: 100 LFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERD 159
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM------P-------------------------- 261
SWN ++ GY G +EEA L+ RM P
Sbjct: 160 VFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHA 219
Query: 262 -------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
G + ++T ++ G++E + ++F+ M D ++W A+I+G N + E
Sbjct: 220 HVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEA 279
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
F+ ML +V PN +T++SV AS + L+ +IHA VK +DV+ NSL+
Sbjct: 280 GLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQ 339
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YS G + +A +F+ ++ R+ +S+ +MISG+ +NG ++AL ++ M+ + P+ +T
Sbjct: 340 MYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVT 399
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 213/584 (36%), Positives = 315/584 (53%), Gaps = 47/584 (8%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN ++ Y K G A F++ E +V ++ +V Y K ++ AR++FD+ P+ +
Sbjct: 46 SNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDT 105
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V++ ++ GY LF MR G + TL+ L AC R Q+H
Sbjct: 106 VSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCD--RVDLIKQLHCF 163
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEE 252
GFD + N+ +T Y + G + EA VF M RD VSWNS+I Y + E +
Sbjct: 164 AVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAK 223
Query: 253 AYRLFERMPGKDF--------------VSWTTMITGFSSKGNLEK--------------- 283
A L++ M K F S +I G G L K
Sbjct: 224 ALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLID 283
Query: 284 -------------SIELFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEMLRKDVRP 329
S ++F + D V W +ISG+ NE++ EEA + F +M R RP
Sbjct: 284 FYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRP 343
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRI 388
+ + V SA + ++ +QG QIH +K N+ S+ +S+ N+L+SLY K GN++DA R+
Sbjct: 344 DDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRV 403
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + E N VS+N MI G+AQ+G G EAL L+++M D G+ PN ITF+++LSAC H G V
Sbjct: 404 FDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKV 463
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
+EG YF +MK + IEP EHY+CM+D+LGRAG L EA I++M ++P W ALLG
Sbjct: 464 DEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG 523
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R H N+ LA+ AA+ LM ++P +ATPYV+L+++Y+ GK + VR + KRIRK
Sbjct: 524 ACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKK 583
Query: 569 PGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
PGCSWI +K K H+F+A S ++E+ L+ + K K+ +
Sbjct: 584 PGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGY 627
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 180/435 (41%), Gaps = 61/435 (14%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
SYN ++ A ++ I+ A ++F P + VSY +I+G+ A L+ M
Sbjct: 76 SYNVIVKAYAKDS-KIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMREL 134
Query: 68 W--RDSVCSNALISG------YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
D + LI+ +K C + F++ + + V Y K G +
Sbjct: 135 GFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVN----NAFVTYYSKGGLLR 190
Query: 120 EAREIFDKMPE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EA +F M ++ V+W +M+ Y + L+ M G + TL + A
Sbjct: 191 EAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG---FMDEANKVFSMMSKRDAV 235
G Q HG + + GF + +G+ +I Y + G M ++ KVF + D V
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLV 310
Query: 236 SWNSLISGYVHNGE-IEEAYRLFERM------PGK-DFVSWTTMITGFSS---------- 277
WN++ISGY N E EEA + F +M P FV T+ + SS
Sbjct: 311 LWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGL 370
Query: 278 -----------------------KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
GNL + +F+ MPE + V++ +I G+ + E
Sbjct: 371 AIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK--MNMESDVSIQNSL 372
A R + ML + PN +T ++LSA A +++G Q + + +K +E + + +
Sbjct: 431 ALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEG-QKYFNTMKETFKIEPEAEHYSCM 489
Query: 373 VSLYSKCGNVVDAYR 387
+ L + G + +A R
Sbjct: 490 IDLLGRAGKLEEAER 504
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 139/338 (41%), Gaps = 73/338 (21%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H L + L N + +Y + G + A F + + S+N ++ Y
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAK 86
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAI 302
+ +I A +LF+ P D VS+ T+I+G++ ++ LF M E D T + +
Sbjct: 87 DSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGL 146
Query: 303 IS-------------------GF-----VNNE---------QYEEAFRWFIEM--LRKDV 327
I+ GF VNN EA F M LR +V
Sbjct: 147 IAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEV 206
Query: 328 RPNQLTLS------------------------------SVLSASAATATLNQGSQIHAHV 357
N + ++ SVL+A + L G Q H +
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL 266
Query: 358 VKMNMESDVSIQNSLVSLYSKCG---NVVDAYRIFTNIDERNIVSYNSMISGFAQN-GLG 413
+K + + + L+ YSKCG + D+ ++F I ++V +N+MISG++ N
Sbjct: 267 IKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHS 326
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
EEA+ FR+M+ G P+ +F+ V SAC+++ +G
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQG 364
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
+ +L S A L G +HA VK + S + N V+LYSKCG + A F +
Sbjct: 10 SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+E N+ SYN ++ +A+ + +++ R++ DE P+ +++ +++S
Sbjct: 70 EEPNVFSYNVIVKAYAK----DSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAM 125
Query: 453 IYFKSMKTL 461
+ FK M+ L
Sbjct: 126 VLFKRMREL 134
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--P 65
S N + +L + ++ +A +F MP NAVS+ MI G+ + G EA LY M
Sbjct: 382 SVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDS 441
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIE 120
+++ A++S G+ +E + F M +E + + M+D + G++ E
Sbjct: 442 GIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501
Query: 121 AREIFDKMPEK-NVVAWTAMVDGYMK 145
A D MP K VAW A++ K
Sbjct: 502 AERFIDAMPYKPGSVAWAALLGACRK 527
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 218/683 (31%), Positives = 350/683 (51%), Gaps = 107/683 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N M+TA ++ I A +F MP + VS+ A+++G+ +RGMF E+ +L
Sbjct: 78 MPRRDTVSWNTMLTAY-SHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDL 136
Query: 61 YVNM------PARWRDSV----CS---------------------------NALISGYLK 83
+V M P R +V CS +AL+ Y K
Sbjct: 137 FVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGK 196
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK---------------------------- 115
++A F M E++ V+WGS + G +
Sbjct: 197 CRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASA 256
Query: 116 ------------GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF------- 156
GR + A I +K VV TA+VD Y K + D F
Sbjct: 257 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVG-TAIVDVYAKANSLTDARRAFFGLPNHT 315
Query: 157 ----------LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
L M R + F+ ++L+ +F AC Y G QVH L +
Sbjct: 316 VETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIK---------- 365
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
S++ +YG+ + EA +F M ++D+VSWN++I+ NG ++ F M D
Sbjct: 366 -SVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAF 424
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+T++ + G ++++ +L + + + V+W AI+SGF N++ E A ++F EML
Sbjct: 425 VASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMG 484
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
++P+ T ++VL A AT+ G QIH ++K M D I ++LV +Y+KCG++ D+
Sbjct: 485 LKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSL 544
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+F +++R+ VS+N+MI G+A +GLG EAL +F +M+ E +VPN TF++VL AC+HVG
Sbjct: 545 LVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVG 604
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
L ++G YF M T Y +EP EH+ACMVDILGR+ EA+ INSM F+ +W L
Sbjct: 605 LFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTL 664
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
L + ++++A+LAA +++ L+PD ++ Y++LS++Y+ GK D +R R K R++
Sbjct: 665 LSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLK 724
Query: 567 KSPGCSWIILKDKVHLFLAGRKS 589
K PGCSWI + ++H FL G K+
Sbjct: 725 KEPGCSWIEAQSEMHGFLVGDKA 747
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 201/454 (44%), Gaps = 76/454 (16%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN L+ Y + A R+F+AM +D V+W +M+ Y G + A +FD MP+ +V
Sbjct: 55 SNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDV 114
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W A+V GY + F++ DLF+ M R G++ + T +L ++C GVQVH L
Sbjct: 115 VSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHAL 174
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G + D+ G++++ MYG+ +D+A F M +R+ VSW S I+G V N +
Sbjct: 175 AVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRG 234
Query: 254 YRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVTWTAIISG 305
LF M G S+ + ++ L +L + D V TAI+
Sbjct: 235 LELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDV 294
Query: 306 FVNNEQYEEAFRWF-----------------IEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ +A R F + M+R +R + ++LS V SA A T
Sbjct: 295 YAKANSLTDARRAFFGLPNHTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYF 354
Query: 349 QGSQIHAHVVK---------------------MNMESDVS-------------------- 367
G Q+H +K M + VS
Sbjct: 355 PGQQVHCLAIKSVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 414
Query: 368 ----------IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+ +++V +Y KCG + +A ++ I + +VS+N+++SGF+ N E A
Sbjct: 415 FNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQ 474
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
F +M D GL P+ TF +VL C ++ +E G
Sbjct: 475 KFFSEMLDMGLKPDHFTFATVLDTCANLATIELG 508
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 139/251 (55%), Gaps = 3/251 (1%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N L+ Y A R+F+ MP +D VSW TM+T +S G++ ++ LF+ MP+ D V
Sbjct: 56 NCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVV 115
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W A++SG+ ++E+ F+EM R+ V P++ T + +L + +A L+ G Q+HA
Sbjct: 116 SWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALA 175
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
VK +E DV ++LV +Y KC ++ DA F + ERN VS+ S I+G QN L
Sbjct: 176 VKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGL 235
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVD 476
LF +M+ GL +Q ++ S +C + + G ++ ++K ++ + +VD
Sbjct: 236 ELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVG--TAIVD 293
Query: 477 ILGRAGSLAEA 487
+ +A SL +A
Sbjct: 294 VYAKANSLTDA 304
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 71/152 (46%), Gaps = 32/152 (21%)
Query: 368 IQNSLVSL-------------------------------YSKCGNVVDAYRIFTNIDERN 396
+ N L+ + YS G++ A +F + + +
Sbjct: 54 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 113
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+VS+N+++SG+ Q G+ +E+++LF +M G+ P++ TF +L +C+ + + G +
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG-VQVH 172
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
++ +E + +VD+ G+ SL +A+
Sbjct: 173 ALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 332/615 (53%), Gaps = 53/615 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGM--FYEAEELYVNMPARWRDSVCSNALIS 79
SI +A +F ++ ++ VS+ +I G+ ++G + EL+ M R +++ + S
Sbjct: 60 SIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRM--RAENTLPNGHTFS 117
Query: 80 GYLKV--------GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
G G + A + DV S+++ YCK G +++AR++FD +PE+
Sbjct: 118 GVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPER 177
Query: 132 NVVAWTAMVDGY-MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
N V+W ++ GY M+ FE ++LF MRR A + T + A G Q+
Sbjct: 178 NTVSWATIISGYAMERMAFE-AWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQI 236
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H L + G +GN+++TMYG+ G +D+A K F + +D ++W+++I+GY G+
Sbjct: 237 HCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDS 296
Query: 251 EEAYRLFERM--------------------------PGKDFVSW-------------TTM 271
EA LF M GK + T +
Sbjct: 297 HEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTAL 356
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
+ ++ G+L + + F+ + E D V WT++ISG+ N + E A + M + + P++
Sbjct: 357 VDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHE 416
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
LT++SVL A ++ A L QG QIHA +K +V I ++L ++Y+KCG++ D +F
Sbjct: 417 LTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRR 476
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ R+I+++N+MISG +QNG G +AL LF +++ P+ +TF++VLSAC+H+GLVE G
Sbjct: 477 MPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERG 536
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
+YF+ M + I P EHYACMVDIL RAG L E + I S T + +W LLGA R
Sbjct: 537 KVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACR 596
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
+ N +L A + LMEL ++ Y++LS +Y+ +G+ D RVR KL+ + K PGC
Sbjct: 597 NYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGC 656
Query: 572 SWIILKDKVHLFLAG 586
SWI LK +VH+F+ G
Sbjct: 657 SWIELKSQVHVFVVG 671
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 209/401 (52%), Gaps = 42/401 (10%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF--DLFLSMRRGGM 164
S+V+ Y K G +++A+ +F+ + K+VV+W +++GY + F +LF MR
Sbjct: 50 SLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENT 109
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
N T + +F A G+Q H L + YD+ +G+S+I MY ++G M +A K
Sbjct: 110 LPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARK 169
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-------------------DF 265
VF + +R+ VSW ++ISGY EA+ LF M + D
Sbjct: 170 VFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDL 229
Query: 266 VSW--------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
V + ++T + G L+ +++ F + +KDD+TW+A+I+G
Sbjct: 230 VHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITG 289
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+ EA F M +P++ T V++A + L +G QIH + +K E
Sbjct: 290 YAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQ 349
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ +LV +Y+KCG++VDA + F + E +IV + SMISG+AQNG E AL L+ +M+
Sbjct: 350 IYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQM 409
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIE 465
E ++P+++T SVL AC+ + +E+G I+ +++K +++E
Sbjct: 410 ERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLE 450
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 186/376 (49%), Gaps = 45/376 (11%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L C R ++G +H + R G + L NS++ +Y + G + +A VF ++ +D
Sbjct: 16 LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75
Query: 234 AVSWNSLISGYVHNGEIEEAY--RLFERMPGK---------------------------- 263
VSWN LI+GY G + ++ LF+RM +
Sbjct: 76 VVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D +++I + G + + ++F+ +PE++ V+W IISG+
Sbjct: 136 HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA+ F M R++ ++ +SVLSA ++ G QIH +K + S S+ N+L
Sbjct: 196 FEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNAL 255
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V++Y KCG + DA + F +++ +++++MI+G+AQ G EALNLF M G P++
Sbjct: 256 VTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSE 315
Query: 433 ITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
TF+ V++AC+ +G +EEG I+ S+K Y E +VD+ + GSL +A
Sbjct: 316 FTFVGVINACSDIGALEEGKQIHGYSLKAGY--ECQIYFMTALVDMYAKCGSLVDARKGF 373
Query: 492 NSMTFEPPPGVWGALL 507
+ + EP +W +++
Sbjct: 374 DYLK-EPDIVLWTSMI 388
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 180/399 (45%), Gaps = 49/399 (12%)
Query: 1 MADRTSASYNAMI-TALINNNCSI---YEAFEIFATMPMRNAVSYAAMITGFVRRGMFYE 56
+A +TS Y+ + ++LIN C I +A ++F T+P RN VS+A +I+G+ M +E
Sbjct: 138 LAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFE 197
Query: 57 AEELYVNMPAR--WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGS----MVD 110
A EL+ M D +++S +I ++ +++ S +V
Sbjct: 198 AWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVT 257
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K G + +A + F+ +K+ + W+AM+ GY + + +LF +M G + T
Sbjct: 258 MYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFT 317
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ AC EG Q+HG + G++ I +++ MY + G + +A K F +
Sbjct: 318 FVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLK 377
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKD 264
+ D V W S+ISGY NGE E A L+ RM GK
Sbjct: 378 EPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQ 437
Query: 265 FVSWT-------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
+ T + T ++ G+LE +F MP +D +TW A+ISG N +
Sbjct: 438 IHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGE 497
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+A F E+ +P+ +T +VLSA + + +G
Sbjct: 498 GLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERG 536
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 146/296 (49%), Gaps = 15/296 (5%)
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ--YEEAFRWFIEMLRKDV 327
+++ ++ G++ K+ +F + KD V+W +I+G+ Y F M ++
Sbjct: 50 SLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENT 109
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
PN T S V +A++++ G Q HA +K + DV + +SL+++Y K G ++DA +
Sbjct: 110 LPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARK 169
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F I ERN VS+ ++ISG+A + EA LF M+ E ++ + SVLSA L
Sbjct: 170 VFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDL 229
Query: 448 VEEG-FIYFKSMKT-LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
V G I+ ++K L +I +V + G+ G L +A+ ++ + W A
Sbjct: 230 VHYGKQIHCLALKNGLLSIASVGN---ALVTMYGKCGCLDDALKTFE-LSGDKDDITWSA 285
Query: 506 LLG----AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
++ AG +H L+L HL +P T +V + + S IG +G ++
Sbjct: 286 MITGYAQAGDSHEALNL--FYNMHLNGNKPSEFT-FVGVINACSDIGALEEGKQIH 338
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P + +L L +G IHA +++ S V + NSLV+LY+KCG++V A +
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 389 FTNIDERNIVSYNSMISGFAQNG-LGEE-ALNLFRKMKDEGLVPNQITFLSVLSA 441
F +I +++VS+N +I+G++Q G +G + LF++M+ E +PN TF V +A
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTA 122
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 224/654 (34%), Positives = 345/654 (52%), Gaps = 63/654 (9%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRC 87
++F P + ++ F R EA L++ + R S + +S LKV C
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGL--RRSGSPTDGSSLSCVLKVCGC 104
Query: 88 EEAARIFEAMVEK-------------DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+F+ +V K DV S+VD Y K V + +FD+M KNVV
Sbjct: 105 -----LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVV 159
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WT+++ GY + E LF M+ G+ N T + +GVQVH +V
Sbjct: 160 SWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMV 219
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G D I +GNS++ MY + + +A VF M R+AVSWNS+I+G+V NG EA+
Sbjct: 220 IKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAF 279
Query: 255 RLFERM-------------------------------------PGKDF--VSWTTMITGF 275
LF RM G DF T ++ +
Sbjct: 280 ELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAY 339
Query: 276 SSKGNLEKSIELFNMMPE-KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLT 333
S ++ + +LF MM ++ V+WTAIISG+V N + + A F +M R++ V PN+ T
Sbjct: 340 SKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFT 399
Query: 334 LSSVLSASAA-TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
SSVL+A AA TA++ QG Q H+ +K + + + ++LV++Y+K GN+ A +F
Sbjct: 400 FSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ 459
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+R++VS+NSMISG+AQ+G G+++L +F +M+ + L + ITF+ V+SAC H GLV EG
Sbjct: 460 VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQ 519
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
YF M Y+I P EHY+CMVD+ RAG L +A+DLIN M F +W LL A R
Sbjct: 520 RYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRV 579
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
HLN+ L +LAA+ L+ L+P + YV+LS++Y+ G ++ +VR +K+++K G S
Sbjct: 580 HLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYS 639
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD-WPKHDWSLLGLERD 625
WI +K+K F+AG S I + L+ +S K+ +P + L +E +
Sbjct: 640 WIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEE 693
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 193/364 (53%), Gaps = 41/364 (11%)
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
++++FD+ P++ + ++ + + D ++ +LFL +RR G + +L+ + + CG
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F G QVH + GF D+ +G S++ MY + +++ +VF M ++ VSW S
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIE--------- 286
L++GY NG E+A +LF +M + ++ ++ G ++ G +EK ++
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223
Query: 287 --------------------------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
+F+ M ++ V+W ++I+GFV N EAF F
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M + V+ Q ++V+ A ++ Q+H V+K + D++I+ +L+ YSKC
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343
Query: 381 NVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSV 438
+ DA+++F + +N+VS+ ++ISG+ QNG + A+NLF +M ++EG+ PN+ TF SV
Sbjct: 344 EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSV 403
Query: 439 LSAC 442
L+AC
Sbjct: 404 LNAC 407
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 153/306 (50%), Gaps = 22/306 (7%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
D T N+M+ + + + + +A +F +M RNAVS+ +MI GFV G+ EA EL+
Sbjct: 225 DSTIFVGNSMVN-MYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARI-FEAMVEKDVVAWGSMVD---------GY 112
M R + + + +K+ C + F + V+ GS D Y
Sbjct: 284 RM--RLEGVKLTQTIFATVIKL--CANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAY 339
Query: 113 CKKGRVIEAREIFDKMPE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSIT 170
K + +A ++F M +NVV+WTA++ GY++ + +LF MRR G+ N T
Sbjct: 340 SKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFT 399
Query: 171 LTILFEACGR-FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
+ + AC +G Q H + GF + + ++++TMY + G ++ AN+VF
Sbjct: 400 FSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ 459
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSI 285
RD VSWNS+ISGY +G +++ ++FE M K D +++ +I+ + G + +
Sbjct: 460 VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQ 519
Query: 286 ELFNMM 291
F++M
Sbjct: 520 RYFDLM 525
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 90/168 (53%)
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
S +LF+ P++ ++ F N+Q +EA F+ + R + +LS VL
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
G Q+H +K DVS+ SLV +Y K +V D R+F + +N+VS+ S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++G+ QNGL E+AL LF +M+ EG+ PN TF +VL G VE+G
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKG 212
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 200/579 (34%), Positives = 317/579 (54%), Gaps = 72/579 (12%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
V +NA I+ ++ G E A F+AM + ++ +++ GY + A +F +MP +
Sbjct: 18 VAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSR 77
Query: 132 N---------------------------------VVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ VV++T+++ GY++ D LF
Sbjct: 78 DLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQ 137
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M N +T T+L G F + L D D++ ++++ Y + G
Sbjct: 138 MPER----NHVTYTVLL---GGFLDAGRVNEARKLFDEMP-DKDVVARTAMLSGYCQAGR 189
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
+ EA +F M KR+ VSW ++ISGY NG++ A +LFE MP ++ VSWT M+ G+
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQA 249
Query: 279 GNLEKSIELFNMMPE-------------------------------KDDVTWTAIISGFV 307
G++E + +LFN MP+ +DD TW+A+I +
Sbjct: 250 GHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYE 309
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
NE EA F EML + +RPN + S+L+ AA AT + G ++HA +++ + ++DV
Sbjct: 310 QNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVF 369
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
++L+++Y KCGN+ A R+F + +++V +NSMI+G+AQ+GLGEEAL +F ++
Sbjct: 370 AVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLAR 429
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ P+ IT++ VL+AC++ G V+EG F SM +I G HY+CMVD+LGRAG + EA
Sbjct: 430 MAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEA 489
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+DLIN+M EP +WGAL+GA R H N ++A++AA+ L+ELEP SA PYV+LS +Y+
Sbjct: 490 LDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTST 549
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
G+ D + +R + + KSPGCSWI VHLF +G
Sbjct: 550 GRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSG 588
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 151/579 (26%), Positives = 240/579 (41%), Gaps = 127/579 (21%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMIT-------------- 46
M RT+ASYNA+I N+ A +F MP R+ SY A+I
Sbjct: 43 MPLRTTASYNALIAGYFRNHLP-DAALGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAA 101
Query: 47 -------------------GFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRC 87
G+VR G+ +A L+ MP R+ V L+ G+L GR
Sbjct: 102 ALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPE--RNHVTYTVLLGGFLDAGRV 159
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
EA ++F+ M +KDVVA +M+ GYC+ GR+ EAR +FD+MP++NVV+WTAM+ GY +
Sbjct: 160 NEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNG 219
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF--DYDIIL 205
LF M N ++ T + Y + V F D+ +
Sbjct: 220 KVILARKLFEVMPDR----NEVSWTAMLVG------YIQAGHVEDAEDLFNAMPDHPVAA 269
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-- 263
N+++ +G+ G +D A +F M RD +W+++I Y N + EA F M +
Sbjct: 270 CNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGI 329
Query: 264 -------------------------------------DFVSWTTMITGFSSKGNLEKSIE 286
D + + +IT + GNL+K+
Sbjct: 330 RPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKR 389
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+FNM KD V W ++I+G+ + EEA F ++ + P+ +T VL+A + T
Sbjct: 390 VFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGK 449
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
+ +G +I M M S + + Y+ M+
Sbjct: 450 VKEGREIFN---SMGMNSSIRL---------------------------GAAHYSCMVDL 479
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+ GL +EAL+L M E P+ I + +++ AC + + I + K L +EP
Sbjct: 480 LGRAGLVDEALDLINNMPVE---PDAIIWGALMGACR---MHKNAEIAEVAAKKLLELEP 533
Query: 467 GPE-HYACMVDILGRAGSLAEAIDL---INSMTFEPPPG 501
G Y + I G +A D+ I+S PG
Sbjct: 534 GSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPG 572
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 54/286 (18%)
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
++ N+ I R G ++ A F M R S+N+LI+GY N + A LF RMP
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76
Query: 263 KDF---------------------------------VSWTTMITGFSSKGNLEKSIELFN 289
+D VS+T+++ G+ G L +I LF+
Sbjct: 77 RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
MPE++ VT+T ++ GF++ + EA + F EM KDV + +++LS + +
Sbjct: 137 QMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDV----VARTAMLSGYCQAGRITE 192
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
+ + K N+ S +++S Y++ G V+ A ++F + +RN VS+ +M+ G+ Q
Sbjct: 193 ARALFDEMPKRNVVS----WTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQ 248
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH--VGLVEEGFI 453
G E+A +LF M D ++ACN VG + G +
Sbjct: 249 AGHVEDAEDLFNAMPDHP-----------VAACNAMMVGFGQHGMV 283
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 210/663 (31%), Positives = 349/663 (52%), Gaps = 49/663 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N ++ + +N S+ +A ++F MP N +S+ + G+ R F++A + +
Sbjct: 74 NILLNFYVQSN-SLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGH 132
Query: 70 D------SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
+ + L+S L A +++ D +++D Y +G V AR
Sbjct: 133 EVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARH 192
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD + K++V+WT MV Y + +E+ LF MR G N+ T++ ++C
Sbjct: 193 VFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEA 252
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+ G VHG + +D+D+ +G +++ +Y + G + +A ++F M K D + W+ +I+
Sbjct: 253 FNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIAR 312
Query: 244 YVHNGEIEEAYRLFERMP--------------------------GKD------------- 264
Y + +EA LF RM GK
Sbjct: 313 YAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSN 372
Query: 265 -FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
FVS ++ ++ G +E S++LF +P+++DVTW II G+V E A F ML
Sbjct: 373 VFVS-NAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHML 431
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
D++P ++T SSVL ASA+ A L G QIH+ +K D + NSL+ +Y+KCG +
Sbjct: 432 EHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRIN 491
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
DA F +++R+ VS+N+MI G++ +G+ EALNLF M+ PN++TF+ VLSAC+
Sbjct: 492 DARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACS 551
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
+ GL+ +G +F+SM Y+I+P EHY CMV +LGR G EA+ LI + ++P VW
Sbjct: 552 NAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVW 611
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
ALLGA H +DL ++ AQH++E+EP +V+LS++Y+ G+ + VR + K
Sbjct: 612 RALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKK 671
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGL 622
++RK PG SW+ + VH F G S D+K I L+ ++K T++ + P + LL +
Sbjct: 672 KVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDV 731
Query: 623 ERD 625
+ D
Sbjct: 732 QDD 734
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 208/427 (48%), Gaps = 42/427 (9%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D+ A +++ Y + + +A ++FD+MP+ N +++ + GY + F L +
Sbjct: 69 DLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIF 128
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+ G N T L + +H V + G D +G ++I Y G +D
Sbjct: 129 KEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVD 188
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------- 261
A VF + +D VSW +++ Y N EE+ +LF +M
Sbjct: 189 VARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCL 248
Query: 262 -------GK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
GK D ++ ++ G + + LF MP+ D + W+
Sbjct: 249 GLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSL 308
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+I+ + +++ +EA F+ M + V PN T +SVL A A++ +L+ G QIH+ V+K
Sbjct: 309 MIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFG 368
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ S+V + N+++ +Y+KCG + ++ ++F + +RN V++N++I G+ Q G GE A+NLF
Sbjct: 369 LNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFT 428
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGR 480
M + + P ++T+ SVL A + +E G I+ ++KT+YN + + ++D+ +
Sbjct: 429 HMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANS--LIDMYAK 486
Query: 481 AGSLAEA 487
G + +A
Sbjct: 487 CGRINDA 493
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 328/585 (56%), Gaps = 43/585 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-- 67
N+M+ + + A E+F +MP R+ VS+ M++ + G EA ++ V+M ++
Sbjct: 208 NSMLAGYVKTY-GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 68 ------WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
+ S+ + A +S L+ G+ + A++ + D ++V+ Y K G EA
Sbjct: 267 RLDSTTYTSSLTACARLSS-LRWGK-QLHAQVIRNLPHIDPYVASALVELYAKSGCFKEA 324
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
+ +F+ + ++N VAWT ++ G+++ CF + +LF MR M + L L C
Sbjct: 325 KGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSR 384
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
G Q+H L + G +++ NS+I+M
Sbjct: 385 MDLCLGRQLHSLCLKSGQIQAVVVSNSLISM----------------------------- 415
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
Y ++ A +F M KD VSWT+MIT +S GN+ K+ E F+ M EK+ +TW A
Sbjct: 416 --YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNA 473
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
++ ++ + E+ R + ML ++ VRP+ +T ++ A G QI VK+
Sbjct: 474 MLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV 533
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ D S+ N+++++YSKCG +++A ++F ++ ++IVS+N+MI+G++Q+G+G++A+ +F
Sbjct: 534 GLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIF 593
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+ G P+ I++++VLS C+H GLV+EG YF MK +NI PG EH++CMVD+LGR
Sbjct: 594 DDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGR 653
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA DLI+ M +P VWGALL A + H N +LA+LAA+H+ EL+ + Y+++
Sbjct: 654 AGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLM 713
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+ +Y+ GK D ++R + K I+K+PG SW+ + +KVH+F A
Sbjct: 714 AKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKA 758
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 189/370 (51%), Gaps = 33/370 (8%)
Query: 75 NALISGYLKVGRCEEAARIFEA-MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N L+ YL G +A R+ + +V+ M++GY K GR+ +A E+F +MP ++V
Sbjct: 43 NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDV 102
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHG 192
+W ++ GY + + + FLSM R G ++ N+ TL ++CG + +Q+
Sbjct: 103 ASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLA 162
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+V +F D + +++ M+ R G +D A+++F + + NS+++GYV ++
Sbjct: 163 MVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDH 222
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A LF+ MP +D VSW M++ S G + +++++
Sbjct: 223 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDM------------------------- 257
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
++M K VR + T +S L+A A ++L G Q+HA V++ D + ++L
Sbjct: 258 ------VVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASAL 311
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V LY+K G +A +F ++ +RN V++ +ISGF Q G E++ LF +M+ E + +Q
Sbjct: 312 VELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQ 371
Query: 433 ITFLSVLSAC 442
+++S C
Sbjct: 372 FALATLISGC 381
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 149/316 (47%), Gaps = 45/316 (14%)
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-ERMPGKDFVSWTTM 271
+GRL + A+ VF N+L+ Y+ G + +A RL + + ++ M
Sbjct: 27 HGRLVAVGLASAVFLQ---------NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVM 77
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPN 330
+ G++ G L ++ELF MP +D +W ++SG+ + QY + F+ M R D PN
Sbjct: 78 LNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPN 137
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
TL+ + + A + Q+ A V K + + D + +LV ++ +CG V A R+F
Sbjct: 138 AFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFV 197
Query: 391 NIDE-------------------------------RNIVSYNSMISGFAQNGLGEEALNL 419
I E R++VS+N M+S +Q+G EAL++
Sbjct: 198 RIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDM 257
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDIL 478
M+ +G+ + T+ S L+AC + + G ++ + ++ L +I+P + +V++
Sbjct: 258 VVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA--SALVELY 315
Query: 479 GRAGSLAEAIDLINSM 494
++G EA + NS+
Sbjct: 316 AKSGCFKEAKGVFNSL 331
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 201/586 (34%), Positives = 325/586 (55%), Gaps = 46/586 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM----PMRNAVSYAAMITGFVRRGMFYE 56
M + SY M+ L NNC + EA +F M + N V+ A++I+ + G
Sbjct: 144 MPIKGCVSYTTMVMGLAQNNCWL-EAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILN 202
Query: 57 AEELYV---NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
L+ + + V +N L+ Y A +F+ + E++VV W M++GY
Sbjct: 203 CRMLHALSFKLGLEALNIVATN-LVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYS 261
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G V AR++F+++P K+VV+W ++DGY++++ + ++ SM R G+ N + +
Sbjct: 262 KSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVD 321
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFD-YDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
L ACGR EG Q HG++ R GFD YD I
Sbjct: 322 LISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQA-------------------------- 355
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS-WTTMITGFSSKGNLEKSIELFNMM 291
++I Y GEI A+ FE + KD VS W +I+GF G +E++ +LF+ M
Sbjct: 356 ------TIIHFYAACGEINLAFLQFE-LGSKDHVSSWNALISGFVRNGMIEQARQLFDEM 408
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
PE+D +W+++ISG+ NEQ + A + F EM+ V+PN++T+ SV SA A TL +G
Sbjct: 409 PERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGR 468
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER--NIVSYNSMISGFAQ 409
H +++ ++ + ++ +L+ +Y+KCG++ A ++F I +R ++ +N++I G A
Sbjct: 469 WAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAM 528
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+G +L LF +++ + PN ITF+ VLSAC H GLV+ G YFK MK LYNIEP +
Sbjct: 529 HGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIK 588
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
HY CM+D+LGRAG L EA ++I M + +WG LL A RTH N+++ + AA++L +L
Sbjct: 589 HYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKL 648
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+ V+LS++Y+ G+ D VR + +R++KSPGCS ++
Sbjct: 649 DISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCSGVV 694
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 141/508 (27%), Positives = 233/508 (45%), Gaps = 80/508 (15%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+LIS Y+K A +F+ D V+ M+ GY K G + AR +F+KMP K V
Sbjct: 91 NSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCV 150
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
++T MV G + +C+ + +F MR G+ N +TL + A +H L
Sbjct: 151 SYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALS 210
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G + I+ +++ MY + A +F + +R+ V+WN +++GY +G ++ A
Sbjct: 211 FKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLAR 270
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
LFER+P KD VSW T II G+V E+ E
Sbjct: 271 DLFERIPAKDVVSWGT-------------------------------IIDGYVQIERLGE 299
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A R + MLR V PN++ + ++SA T +++G Q H +V+ + IQ +++
Sbjct: 300 ALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIH 359
Query: 375 LYSKCGNVVDAY-------------------------------RIFTNIDERNIVSYNSM 403
Y+ CG + A+ ++F + ER++ S++SM
Sbjct: 360 FYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSM 419
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-----FIYFKSM 458
ISG++QN + AL LF +M G+ PN+IT +SV SA +G + EG +I S+
Sbjct: 420 ISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSI 479
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDL---INSMTFEPPPGVWGALLG--AGRTH 513
N+ A ++D+ + GS+ A+ L I P W A++ A H
Sbjct: 480 PLNDNLN------AALIDMYAKCGSITIALQLFYEIQDRVSSVSP--WNAIICGLAMHGH 531
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLS 541
N+ L + + ++P+S T VLS
Sbjct: 532 ANVSLKLFSQLQRVRIKPNSITFIGVLS 559
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 146/314 (46%), Gaps = 62/314 (19%)
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
+TL ++C +G Q+H LV + G +I + NS+I+ Y + + A +F
Sbjct: 53 LTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDT 112
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
S D VS N +++GYV +G ++ A LFE+MP K VS+TTM+ G +
Sbjct: 113 CSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLA------------ 160
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
N + EA F +M V PN++TL+SV+SA + +
Sbjct: 161 -------------------QNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGIL 201
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+HA K+ +E+ + +LV +Y C ++ +A +F I ERN+V++N M++G++
Sbjct: 202 NCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYS 261
Query: 409 QNGLGE-------------------------------EALNLFRKMKDEGLVPNQITFLS 437
++GL + EAL ++R M G+ PN++ +
Sbjct: 262 KSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVD 321
Query: 438 VLSACNHVGLVEEG 451
++SAC V EG
Sbjct: 322 LISACGRTMAVSEG 335
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 302/549 (55%), Gaps = 40/549 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF-LSM 159
+V S+++ YCK G V +AR +FD MP++N +W+ MV GY C E+ FDLF L +
Sbjct: 46 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 105
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
+ T + A G Q+HGL+ + G + + NS++TMY + G M
Sbjct: 106 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 165
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSW----------- 268
A VF +R++++W+++I+GY NGE + A +F +M F
Sbjct: 166 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 225
Query: 269 ----------------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+ ++ ++ G + + E F+ + E D V WT
Sbjct: 226 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 285
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A++SG V N ++EEA + M ++ + P++ T++S L A A A L G Q+H +VK
Sbjct: 286 AMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKY 345
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ + ++L ++YSKCGN+ D +F I +R+++++NS+ISGF+QNG G AL+LF
Sbjct: 346 GLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLF 405
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+MK EG +P+ ITF+++L AC+H+GLV+ G+ YF M Y + P +HYACMVDIL R
Sbjct: 406 EEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSR 465
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA D I S+T + +W +LGA R+ + D+ A + LMEL ++ Y++L
Sbjct: 466 AGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILL 525
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S++Y+ K D RVR +L+ + K PGCSW+ L +VH+F+ G + + + I L
Sbjct: 526 SNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQL 585
Query: 601 QTISKGTKE 609
+ ++K K+
Sbjct: 586 RRLAKHMKD 594
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 171/390 (43%), Gaps = 53/390 (13%)
Query: 12 MITALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---- 64
+ T+L+N C + +A +F MP RN+ S++ M+ G+ EA +L+ M
Sbjct: 49 VCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEEC 108
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKD-----VVAWGSMVDGYCKKGRVI 119
P+ + V + L + + +G ++ KD V S+V Y K G +
Sbjct: 109 PSEKSEFVATAVLSAVSVPLGLL--MGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMG 166
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
A +F+ E+N + W+AM+ GY + + +F M G T + A
Sbjct: 167 AAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASS 226
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
G Q HGL+ + GF+ I + ++++ MY + G + +A + F + + D V W +
Sbjct: 227 DLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTA 286
Query: 240 LISGYVHNGEIEEAYRLFERM--------------------------PGKDFVSW----- 268
++SG+V NGE EEA L+ RM PGK +
Sbjct: 287 MVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYG 346
Query: 269 --------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
+ + T +S GNLE + +F +P++D + W +IISGF N A F
Sbjct: 347 LGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFE 406
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQG 350
EM + P+ +T ++L A + +++G
Sbjct: 407 EMKMEGTIPDNITFINILCACSHMGLVDRG 436
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 150/300 (50%), Gaps = 13/300 (4%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
N+++T C + AF +F + RN+++++AMITG+ + G A ++ M
Sbjct: 153 NSLVTMYAKAGC-MGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGF 211
Query: 65 -PARWRDSVCSNALIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
P + NA G L VG+ + + + E + ++VD Y K G + +A+
Sbjct: 212 TPTEFTFVGVLNASSDLGALAVGK-QAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAK 270
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
E FD++ E ++V WTAMV G+++ E+ L+ M + G+ + T+ AC
Sbjct: 271 EGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIA 330
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G Q+H + ++G +G+++ TMY + G +++ VF + RD ++WNS+IS
Sbjct: 331 ALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIIS 390
Query: 243 GYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
G+ NG A LFE M + D +++ ++ S G +++ E F++M + +T
Sbjct: 391 GFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLT 450
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 36/236 (15%)
Query: 354 HAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
HA K+ + S+V + SL+++Y K G V DA R+F + +RN S+++M++G+A
Sbjct: 34 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 93
Query: 413 GEEALNLFRKMKDEGLVP---NQITFLSVLSACN-----------HVGLVEEGFIYFKSM 458
EEA +LFR M +E P ++ +VLSA + H +V++G + F S+
Sbjct: 94 SEEAFDLFRLMLEE--CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSV 151
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD- 517
+ +V + +AG + A + S + E W A++ + D
Sbjct: 152 EN------------SLVTMYAKAGCMGAAFHVFES-SRERNSITWSAMITGYAQNGEADS 198
Query: 518 -LAKLAAQHLMELEPDSATPYVVL---SDLYSV-IGKKRDGNRVRMKKKLKRIRKS 568
++ + H P T VL SDL ++ +GK+ G V++ +++ KS
Sbjct: 199 AVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKS 254
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 302/549 (55%), Gaps = 40/549 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF-LSM 159
+V S+++ YCK G V +AR +FD MP++N +W+ MV GY C E+ FDLF L +
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 211
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
+ T + A G Q+HGL+ + G + + NS++TMY + G M
Sbjct: 212 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 271
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSW----------- 268
A VF +R++++W+++I+GY NGE + A +F +M F
Sbjct: 272 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331
Query: 269 ----------------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+ ++ ++ G + + E F+ + E D V WT
Sbjct: 332 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 391
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A++SG V N ++EEA + M ++ + P++ T++S L A A A L G Q+H +VK
Sbjct: 392 AMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKY 451
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ + ++L ++YSKCGN+ D +F I +R+++++NS+ISGF+QNG G AL+LF
Sbjct: 452 GLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLF 511
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+MK EG +P+ ITF+++L AC+H+GLV+ G+ YF M Y + P +HYACMVDIL R
Sbjct: 512 EEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSR 571
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA D I S+T + +W +LGA R+ + D+ A + LMEL ++ Y++L
Sbjct: 572 AGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILL 631
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S++Y+ K D RVR +L+ + K PGCSW+ L +VH+F+ G + + + I L
Sbjct: 632 SNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQL 691
Query: 601 QTISKGTKE 609
+ ++K K+
Sbjct: 692 RRLAKHMKD 700
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 150/300 (50%), Gaps = 13/300 (4%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
N+++T C + AF +F + RN+++++AMITG+ + G A ++ M
Sbjct: 259 NSLVTMYAKAGC-MGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGF 317
Query: 65 -PARWRDSVCSNALIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
P + NA G L VG+ + + + E + ++VD Y K G + +A+
Sbjct: 318 TPTEFTFVGVLNASSDLGALAVGK-QAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAK 376
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
E FD++ E ++V WTAMV G+++ E+ L+ M + G+ + T+ AC
Sbjct: 377 EGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIA 436
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G Q+H + ++G +G+++ TMY + G +++ VF + RD ++WNS+IS
Sbjct: 437 ALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIIS 496
Query: 243 GYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
G+ NG A LFE M + D +++ ++ S G +++ E F++M + +T
Sbjct: 497 GFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLT 556
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 145/311 (46%), Gaps = 38/311 (12%)
Query: 281 LEKSIELFNMMPE--KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
L + +F+ +P +D +W ++++ + + R+ + V P+ + ++
Sbjct: 65 LAAAFAVFDDIPPAARDVTSWNSLLNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAF 124
Query: 339 SASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+A+A A+ G+ HA K+ + S+V + SL+++Y K G V DA R+F + +RN
Sbjct: 125 TAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNS 184
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP---NQITFLSVLSACN----------- 443
S+++M++G+A EEA +LFR M +E P ++ +VLSA +
Sbjct: 185 FSWSTMVAGYAAEKCSEEAFDLFRLMLEE--CPSEKSEFVATAVLSAVSVPLGLLMGEQM 242
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H +V++G + F S++ +V + +AG + A + S + E W
Sbjct: 243 HGLIVKDGLLDFVSVEN------------SLVTMYAKAGCMGAAFHVFES-SRERNSITW 289
Query: 504 GALLGAGRTHLNLD--LAKLAAQHLMELEPDSATPYVVL---SDLYSV-IGKKRDGNRVR 557
A++ + D ++ + H P T VL SDL ++ +GK+ G V+
Sbjct: 290 SAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVK 349
Query: 558 MKKKLKRIRKS 568
+ +++ KS
Sbjct: 350 LGFEVQIYVKS 360
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 195/540 (36%), Positives = 302/540 (55%), Gaps = 40/540 (7%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK-KGRVIEAREIFDKM 128
D V N I+ +++ E A +FE M + V W +M+ GY K G+V EA E+FDK+
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
PE + V++ M+ Y++ E F M
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVK-------------------------- 165
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
DI N++I+ + + G M +A +FS+M +++ VSW+++ISGYV +G
Sbjct: 166 -------------DIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHG 212
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
++E A L++ + K V T M+TG+ G +E + +F M K+ VTW ++I+G+V
Sbjct: 213 DLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVE 272
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
N + E+ + F M+ VRPN L+LSSVL + + L G Q+H V K + D +
Sbjct: 273 NCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTA 332
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
SL+S+Y KCG++ A+++F + ++++S+N+MISG+AQ+G G +AL+LF KM++ +
Sbjct: 333 CTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTM 392
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
P+ ITF++V+ ACNH G V+ G YFKSMK + IE P HY C++D+LGRAG L EA+
Sbjct: 393 KPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAV 452
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
LI M F+P ++G LLGA R H NLDLA+ AA++L+ L+P SAT YV L+++Y+
Sbjct: 453 SLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATN 512
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K +VR K + K PG SWI +K H F + + +L I L + K
Sbjct: 513 KWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMK 572
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 175/344 (50%), Gaps = 15/344 (4%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
S SYN M+ + + + A F MP+++ S+ +I+GF + G +A +L+ MP
Sbjct: 136 SVSYNIMLVCYLRSY-GVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP 194
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
+ + V +A+ISGY++ G E A +++ + K VV +M+ GY K G+V A IF
Sbjct: 195 EK--NGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIF 252
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+M KN+V W +M+ GY++ EDG +F +M + N ++L+ + C
Sbjct: 253 QRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALP 312
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G Q+H LVS+ D S+I+MY + G +D A K+F M ++D +SWN++ISGY
Sbjct: 313 LGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYA 372
Query: 246 HNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDD 296
+G +A LF++M D++++ +I + G ++ ++ F M E
Sbjct: 373 QHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKP 432
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
V +T +I + +EA EM +P+ ++L A
Sbjct: 433 VHYTCVIDLLGRAGRLDEAVSLIKEM---PFKPHAAIYGTLLGA 473
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 214/500 (42%), Gaps = 120/500 (24%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVR-RGMFYEAEELYVNMPA 66
S N I + + C + A +F M +R V++ M++G+ + G EA EL+ +P
Sbjct: 75 SLNKTIASFVRA-CDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPE 133
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
DSV N ++ YL+ E A F M KD+ +W +++ G+ + G++ +A ++F
Sbjct: 134 P--DSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
MPEKN V+W+AM+ GY++ E +L+ + GM
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELY---KNVGMK--------------------- 227
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
+++ +++T Y + G ++ A ++F M+ ++ V+WNS+I+GYV
Sbjct: 228 ---------------SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVE 272
Query: 247 NGEIEEAYRLFERM------P---------------------------------GKDFVS 267
N E+ ++F+ M P KD +
Sbjct: 273 NCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTA 332
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T++I+ + G+L+ + +LF MP KD ++W A+ISG+ + +A F +M +
Sbjct: 333 CTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTM 392
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ +T +V+ A ++ G Q +M+ + I
Sbjct: 393 KPDWITFVAVILACNHAGFVDLGVQYFK-----SMKKEFGI------------------- 428
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-HVG 446
E V Y +I + G +EA++L ++M P+ + ++L AC H
Sbjct: 429 ------EAKPVHYTCVIDLLGRAGRLDEAVSLIKEMP---FKPHAAIYGTLLGACRIHKN 479
Query: 447 LVEEGFIYFKSMKTLYNIEP 466
L F + + L N++P
Sbjct: 480 LDLAEF----AARNLLNLDP 495
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ-NGLGEEA 416
+ ++ SDV N ++ + + ++ A +F + R V++N+M+SG+ + G +EA
Sbjct: 65 LHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEA 124
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
LF K+ + V I + L + VE +F M + ++
Sbjct: 125 HELFDKIPEPDSVSYNIMLVCYLRSYG----VEAALAFFNKMPV-----KDIASWNTLIS 175
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
+ G + +A DL + M E W A++ H +L+ A+
Sbjct: 176 GFAQNGQMQKAFDLFSVMP-EKNGVSWSAMISGYVEHGDLEAAE 218
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 328/585 (56%), Gaps = 43/585 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-- 67
N+M+ + + A E+F +MP R+ VS+ M++ + G EA ++ V+M ++
Sbjct: 228 NSMLAGYVKTY-GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 286
Query: 68 ------WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
+ S+ + A +S L+ G+ + A++ + D ++V+ Y K G EA
Sbjct: 287 RLDSTTYTSSLTACARLSS-LRWGK-QLHAQVIRNLPHIDPYVASALVELYAKSGCFKEA 344
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
+ +F+ + ++N VAWT ++ G+++ CF + +LF MR M + L L C
Sbjct: 345 KGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSR 404
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
G Q+H L + G +++ NS+I+M
Sbjct: 405 MDLCLGRQLHSLCLKSGQIQAVVVSNSLISM----------------------------- 435
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
Y ++ A +F M KD VSWT+MIT +S GN+ K+ E F+ M EK+ +TW A
Sbjct: 436 --YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNA 493
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
++ ++ + E+ R + ML ++ VRP+ +T ++ A G QI VK+
Sbjct: 494 MLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV 553
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ D S+ N+++++YSKCG +++A ++F ++ ++IVS+N+MI+G++Q+G+G++A+ +F
Sbjct: 554 GLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIF 613
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+ G P+ I++++VLS C+H GLV+EG YF MK +NI PG EH++CMVD+LGR
Sbjct: 614 DDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGR 673
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA DLI+ M +P VWGALL A + H N +LA+LAA+H+ EL+ + Y+++
Sbjct: 674 AGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLM 733
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+ +Y+ GK D ++R + K I+K+PG SW+ + +KVH+F A
Sbjct: 734 AKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKA 778
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 189/370 (51%), Gaps = 33/370 (8%)
Query: 75 NALISGYLKVGRCEEAARIFEA-MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N L+ YL G +A R+ + +V+ M++GY K GR+ +A E+F +MP ++V
Sbjct: 63 NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDV 122
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHG 192
+W ++ GY + + + FLSM R G ++ N+ TL ++CG + +Q+
Sbjct: 123 ASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLA 182
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+V +F D + +++ M+ R G +D A+++F + + NS+++GYV ++
Sbjct: 183 MVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDH 242
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A LF+ MP +D VSW M++ S G + +++++
Sbjct: 243 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDM------------------------- 277
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
++M K VR + T +S L+A A ++L G Q+HA V++ D + ++L
Sbjct: 278 ------VVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASAL 331
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V LY+K G +A +F ++ +RN V++ +ISGF Q G E++ LF +M+ E + +Q
Sbjct: 332 VELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQ 391
Query: 433 ITFLSVLSAC 442
+++S C
Sbjct: 392 FALATLISGC 401
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 149/316 (47%), Gaps = 45/316 (14%)
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-ERMPGKDFVSWTTM 271
+GRL + A+ VF N+L+ Y+ G + +A RL + + ++ M
Sbjct: 47 HGRLVAVGLASAVFLQ---------NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVM 97
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPN 330
+ G++ G L ++ELF MP +D +W ++SG+ + QY + F+ M R D PN
Sbjct: 98 LNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPN 157
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
TL+ + + A + Q+ A V K + + D + +LV ++ +CG V A R+F
Sbjct: 158 AFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFV 217
Query: 391 NIDE-------------------------------RNIVSYNSMISGFAQNGLGEEALNL 419
I E R++VS+N M+S +Q+G EAL++
Sbjct: 218 RIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDM 277
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDIL 478
M+ +G+ + T+ S L+AC + + G ++ + ++ L +I+P + +V++
Sbjct: 278 VVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA--SALVELY 335
Query: 479 GRAGSLAEAIDLINSM 494
++G EA + NS+
Sbjct: 336 AKSGCFKEAKGVFNSL 351
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 202/642 (31%), Positives = 346/642 (53%), Gaps = 58/642 (9%)
Query: 15 ALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR-- 69
ALI+ C + +A ++F MP+R+ VS+ ++I+G+ G + EA E+Y R+R
Sbjct: 214 ALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYY----RFRNL 269
Query: 70 ----DSVCSNALISGYLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIE 120
DS ++++ +G EE I ++EK DV+ ++ YCK +I+
Sbjct: 270 GVVPDSYTMSSVLRACGGLGSVEEG-DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLID 328
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
R IFDKM ++ V+W M+ GY +V +E+ LF+ M + +T+T + +ACG
Sbjct: 329 GRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTITSILQACGH 387
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G VH + G++ D N +I MY + G + + +VFS M +D+VSWNS+
Sbjct: 388 LGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSM 447
Query: 241 ISGYVHNGEIEEAYRLFERMP-------------------------GKDF---------- 265
I+ Y+ NG +EA +LF+ M GK+
Sbjct: 448 INVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFN 507
Query: 266 ---VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
V T++ ++ G + S+++F M +D +TW II+ V++E R M
Sbjct: 508 SNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRM 567
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ V P+ T+ S+L + A QG +IH + K+ +ESDV + N L+ +YSKCG++
Sbjct: 568 RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSL 627
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+++++F + +++V++ ++IS G G++A+ F +M+ G+VP+ + F++++ AC
Sbjct: 628 RNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFAC 687
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVEEG YF MK Y IEP EHYAC+VD+L R+ L +A D I SM +P +
Sbjct: 688 SHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSI 747
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WGALL A R + ++A+ ++ ++EL PD YV++S++Y+ +GK +R K
Sbjct: 748 WGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKA 807
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
+ ++K PGCSW+ +++KV++F G K +E+ L ++
Sbjct: 808 RGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLA 849
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 242/472 (51%), Gaps = 48/472 (10%)
Query: 26 AFEIF-ATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR---DSVCSNALISGY 81
+F +F P N + ++I G+F EA LY + R R D+ ++I+
Sbjct: 126 SFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLY-SETQRIRLQPDTYTFPSVINAC 184
Query: 82 LKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ E A I + ++ D+ +++D YC+ + +AR++F++MP ++VV+W
Sbjct: 185 AGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWN 244
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
+++ GY + + +++ R G+ +S T++ + ACG EG +HGL+ +
Sbjct: 245 SLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKI 304
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G D+I+ N +++MY + + + ++F M RDAVSWN++I GY G EE+ +LF
Sbjct: 305 GIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF 364
Query: 258 ERMPGK---DFVSWTT--------------------MITG---------------FSSKG 279
M + D ++ T+ MIT ++ G
Sbjct: 365 MEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCG 424
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
NL S E+F+ M KD V+W ++I+ ++ N ++EA + F +M++ DV+P+ +T +LS
Sbjct: 425 NLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLS 483
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
S L G ++H + KM S++ + N+LV +Y+KCG + D+ ++F N+ R+I++
Sbjct: 484 MSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIIT 543
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+N++I+ + L + +M+ EG+ P+ T LS+L C+ + +G
Sbjct: 544 WNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQG 595
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
Q SS+ A A+ AT Q ++H+ ++ + + V L++ Y+ + ++ +F
Sbjct: 72 QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 131
Query: 391 NID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
N+ +NS+I NGL EAL+L+ + + L P+ TF SV++AC
Sbjct: 132 LASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC------- 184
Query: 450 EGFIYFKSMKTLYN 463
G + F+ K++++
Sbjct: 185 AGLLDFEMAKSIHD 198
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 193/611 (31%), Positives = 331/611 (54%), Gaps = 49/611 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSN 75
S+ +A ++F MP RN VS+ ++I G+ + G A E Y M P ++
Sbjct: 113 SLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIK 172
Query: 76 ALIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
A S G + +GR + A + ++ ++A +++ Y K +I+A ++F +M ++++
Sbjct: 173 ACSSLGDIGLGR-QLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLI 231
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHGL 193
+W +M+ G+ ++ + F M G+ N +F AC + G Q+HG+
Sbjct: 232 SWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGM 291
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+FG D+ G S+ MY + G + A VF + + D V+WN++I+G+ + G+ +EA
Sbjct: 292 SIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEA 351
Query: 254 YRLFERMPGKDFVS---------------------------------------WTTMITG 274
F +M + + T++T
Sbjct: 352 IAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTM 411
Query: 275 FSSKGNLEKSIELFN-MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ L +I F M D V+W AI++ + ++Q EE FR M RP+ +T
Sbjct: 412 YAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYIT 471
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L++VL ASA T ++ G+Q+H + +K + D S+ N L+ LY+KCG++ A++IF ++
Sbjct: 472 LTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMI 531
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
++VS++S+I G+AQ G GEEAL LF+ M+ + PN +TF+ VL+AC+HVGLVEEG+
Sbjct: 532 NPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWK 591
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+ +M+ + I P EH +CMVD+L RAG L EA I+ M F+P VW LL A +TH
Sbjct: 592 LYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTH 651
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N+D+ K AA+++++++P ++ +V+L ++Y+ G D R+R K + +RK PG SW
Sbjct: 652 GNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSW 711
Query: 574 IILKDKVHLFL 584
I +KD++H+F
Sbjct: 712 IEVKDRIHVFF 722
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 143/573 (24%), Positives = 262/573 (45%), Gaps = 69/573 (12%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
LIS + E +I + M++ D+ +++ Y K + +A+++FD MPE+N
Sbjct: 69 LISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERN 128
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VV+WT+++ GY + + + + M + G+ + T + +AC G Q+H
Sbjct: 129 VVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHA 188
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V + F II N++I+MY + + +A VFS M+ RD +SW S+I+G+ G E
Sbjct: 189 HVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELE 248
Query: 253 AYRLFERM-------P---------------------------------GKDFVSWTTMI 272
A F+ M P G+D + ++
Sbjct: 249 ALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLC 308
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++ G L + +F + D V W AII+GF +EA +F +M + + P+++
Sbjct: 309 DMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEI 368
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T+ S+L A + + L QG Q+H ++ KM ++ DV + N+L+++Y+KC + DA F +
Sbjct: 369 TVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEM 428
Query: 393 D-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++VS+N++++ ++ EE L + M P+ IT +VL A +E G
Sbjct: 429 RCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIG 488
Query: 452 -FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL--- 507
++ ++KT N + + ++D+ + GSL A + +SM P W +L+
Sbjct: 489 NQVHCYALKTGLNCDTSVTNG--LIDLYAKCGSLKTAHKIFDSM-INPDVVSWSSLILGY 545
Query: 508 ---GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV--RMKKKL 562
G G L L ++++P+ T VL+ S +G +G ++ M+K+
Sbjct: 546 AQFGYGEEALKL----FKTMRRLDVKPNHVTFVGVLTAC-SHVGLVEEGWKLYGTMEKEF 600
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
CS ++ L R CL+ E
Sbjct: 601 GIAPTREHCSCMV-------DLLARAGCLNEAE 626
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 162/339 (47%), Gaps = 45/339 (13%)
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
++ G T L AC G ++H + + D+ L N I+ MYG+ +
Sbjct: 55 KKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSL 114
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGE----IEEAYRLFER--MP------------ 261
+A KVF M +R+ VSW S+I+GY NG+ +E +++ + MP
Sbjct: 115 KDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKAC 174
Query: 262 ---------------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
G ++ +I+ ++ + ++++F+ M +D ++W
Sbjct: 175 SSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWG 234
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVR-PNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
++I+GF EA +F EML + V PN+ SV SA ++ G Q+H +K
Sbjct: 235 SMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIK 294
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ DV SL +Y+KCG + A +F I ++V++N++I+GFA G +EA+
Sbjct: 295 FGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAF 354
Query: 420 FRKMKDEGLVPNQITFLSVLSACN-----HVGLVEEGFI 453
F +M+ +GL+P++IT S+L AC + G+ G+I
Sbjct: 355 FSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYI 393
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 140/255 (54%), Gaps = 10/255 (3%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAV-----SWNSLISGYVHNGEIEEAYRLFERM- 260
N IT + +EA K F + K+ ++ LIS + +E ++ + M
Sbjct: 31 NEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHML 90
Query: 261 ---PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
D ++ + +L+ + ++F+ MPE++ V+WT++I+G+ N Q A
Sbjct: 91 KSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALE 150
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
++ +ML+ V P+Q T S++ A ++ + G Q+HAHV+K + + QN+L+S+Y+
Sbjct: 151 FYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYT 210
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL-VPNQITFL 436
K ++DA +F+ + R+++S+ SMI+GF+Q G EAL F++M +G+ +PN+ F
Sbjct: 211 KSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFG 270
Query: 437 SVLSACNHVGLVEEG 451
SV SAC+ + E G
Sbjct: 271 SVFSACSSLLQPEYG 285
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 314/568 (55%), Gaps = 46/568 (8%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVA----WGSMVDGYCKKGRVIEAREIFDKMPE 130
N L++ ++ + A +I ++ + + + ++++ Y K G + +A +F
Sbjct: 146 NHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHH 205
Query: 131 --KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
K +V WT+++ + LF MR G N T + + A G
Sbjct: 206 HFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQ 265
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H L+ + GFD +I +G +++ MY + M A +VF M +R+ VSWNS+I G+ HN
Sbjct: 266 QLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNN 325
Query: 249 EIEEAYRLF-----ERMPGKDFVSWTTMITGFSSKGNL---------------------- 281
+ A +F E+ + VS +++++ ++ G L
Sbjct: 326 LYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVM 385
Query: 282 -------------EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
++ ++LF + ++D VTW ++ GFV N+++EEA +F M R+ +
Sbjct: 386 NSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGIL 445
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P++ + S+VL +SA+ A L+QG+ IH ++K+ ++ I SL+++Y+KCG++VDAY++
Sbjct: 446 PDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQV 505
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F I++ N++S+ +MIS + +G + + LF M EG+ P+ +TF+ VLSAC+H G V
Sbjct: 506 FEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRV 565
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
EEG +F SMK ++++ PGPEHYACMVD+LGRAG L EA I SM +P P VWGALLG
Sbjct: 566 EEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 625
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R + NL + + AA+ L E+EP + YV+L+++ + G+ + N VR + +RK
Sbjct: 626 ACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKE 685
Query: 569 PGCSWIILKDKVHLFLAGRKSCLDLKEI 596
PGCSWI +K+ +F A +S EI
Sbjct: 686 PGCSWIDVKNMTFVFTAHDRSHSSSDEI 713
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 166/360 (46%), Gaps = 26/360 (7%)
Query: 14 TALIN--NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TAL++ C+ ++ A +F MP RN VS+ +MI GF ++ A ++ ++ R +
Sbjct: 284 TALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDV-LREKT 342
Query: 71 SVCSNALISGYLKVGRCEEAARI-FEAMVEKDVVAWG---------SMVDGYCKKGRVIE 120
+ + +S L C + F V VV +G S++D Y K E
Sbjct: 343 VIPNEVSVSSVLSA--CANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDE 400
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
++F + +++VV W +V G+++ D FE+ + F MRR G+ + + + + +
Sbjct: 401 GVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSAS 460
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+G +H + + G+ ++ + S+ITMY + G + +A +VF + + +SW ++
Sbjct: 461 LAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAM 520
Query: 241 ISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
IS Y +G + LFE M + V++ +++ S G +E+ + FN M + D
Sbjct: 521 ISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHD 580
Query: 297 VT----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+ A + + + + + FIE + ++P ++L A L G +
Sbjct: 581 MNPGPEHYACMVDLLGRAGWLDEAKRFIESM--PMKPTPSVWGALLGACRKYGNLKMGRE 638
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF--TN 391
L+ +L+ + T +L +QIH ++ N S + N+L++LY+KCG + A +F T+
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ IV++ S+I+ + + +AL+LF +M+ G PNQ TF S+LSA +V G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 198/564 (35%), Positives = 312/564 (55%), Gaps = 49/564 (8%)
Query: 101 DVVAWGSMVDGYCKKGRVIE-AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM 159
DVV + +D Y K + + + ++F+ +P N+ ++ A++ GY + D + +F +
Sbjct: 245 DVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLL 304
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
++ G+ + ++L+ AC EG+QVHGL + +I + N+I+ MYG+ G +
Sbjct: 305 QKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGAL 364
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF---------------------- 257
EA VF M RDAVSWN++I+ + NG E+ LF
Sbjct: 365 VEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKAC 424
Query: 258 ------------------ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
RM FV +I +S G +EK+ +L + + E+ V+W
Sbjct: 425 AGWQALNCGMEIHNRIIKSRMGLDSFVG-IALIDMYSKCGMMEKAEKLHDRLAEQTVVSW 483
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
AIISGF +Q EEA + F +ML V P+ T +++L A T+ G QIHA ++K
Sbjct: 484 NAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK 543
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
++SD I ++LV +YSKCGN+ D IF R+ V++N+M+ G+AQ+GLGEEAL +
Sbjct: 544 KELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKI 603
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F M+ E + PN TFL+VL AC H+GLVE+G YF SM + Y ++P EHY+C+VDI+G
Sbjct: 604 FEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMG 663
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
R+G +++A++LI M FE +W LL + H N+++A+ AA +++LEP+ + YV+
Sbjct: 664 RSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVL 723
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
LS++Y+ G + ++R + ++K PGCSWI +K +VH FL G K+ KEI
Sbjct: 724 LSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYEN 783
Query: 600 LQTISKGTKEFDW----PKHDWSL 619
L + T E W P D+ L
Sbjct: 784 LDVL---TDEMKWVGYMPDTDFIL 804
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 188/374 (50%), Gaps = 34/374 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+N LI Y+K A ++F+ M ++D V+W +M+ GY +G + A+++FD MP
Sbjct: 80 TNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGT-- 137
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
G V+ F+ M R G F+ T ++ ++C + G+Q+HGL
Sbjct: 138 --------GCGVVELFD------FRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGL 183
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDE----ANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+ GFD D++ G++++ MY + ++ ++F M K + +H
Sbjct: 184 AVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQ------LHGHA 237
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNL-EKSIELFNMMPEKDDVTWTAIISGFVN 308
++ + G D V T + + NL + S +LFN +P + ++ AII G+
Sbjct: 238 LKTDF-------GTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYAR 290
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
+++ EA F + + + ++++LS A A +G Q+H +K +S++ +
Sbjct: 291 SDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICV 350
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
N+++ +Y KCG +V+A +F + R+ VS+N++I+ QNG E+ L+LF M G+
Sbjct: 351 ANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGM 410
Query: 429 VPNQITFLSVLSAC 442
P++ T+ SVL AC
Sbjct: 411 EPDEFTYGSVLKAC 424
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 164/375 (43%), Gaps = 53/375 (14%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + +F+ C G Q H + F + + N +I MY + + A KVF M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-------------------DFVSWTT 270
+RD VSWN+++ GY G+I A +LF+ MPG D ++
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 271 MITGFSSKGNLEKSIEL----FNMMPEKDDVTWTAIISGF----VNNEQYEEAFRWFIEM 322
++ SS + I++ M + D VT +A++ + V N+ F EM
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ V QL H H +K + +DV I + + +Y KC N+
Sbjct: 224 QKAGVGALQL---------------------HGHALKTDFGTDVVIGTATLDMYMKCNNL 262
Query: 383 VD-AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
D + ++F ++ N+ SYN++I G+A++ G EAL +FR ++ GL ++++ A
Sbjct: 263 SDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRA 322
Query: 442 CNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
C + EG ++ SMK+L + ++D+ G+ G+L EA + M
Sbjct: 323 CAVIKGDLEGLQVHGLSMKSLCQSNICVAN--AILDMYGKCGALVEACLVFEEMVSRDAV 380
Query: 501 GVWGALLGAGRTHLN 515
W A++ A + N
Sbjct: 381 S-WNAIIAAHEQNGN 394
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 178/419 (42%), Gaps = 44/419 (10%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCS 74
++ EA +F M R+AVS+ A+I + G + L+V M P + SV
Sbjct: 363 ALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLK 422
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
L G E RI ++ + D +++D Y K G + +A ++ D++ E+ VV
Sbjct: 423 ACAGWQALNCGM-EIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVV 481
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W A++ G+ E+ F M G+ ++ T + + C G Q+H +
Sbjct: 482 SWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQI 541
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ D + ++++ MY + G M + +F RD V+WN+++ GY +G EEA
Sbjct: 542 IKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEAL 601
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
++FE M +L N+ P + T+ A++ + E+
Sbjct: 602 KIFEYM-------------------------QLENVKP--NHATFLAVLRACGHMGLVEK 634
Query: 315 AFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+F ML + P S V+ + +++ ++ + M E+D I +L+
Sbjct: 635 GLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL---IEGMPFEADAVIWRTLL 691
Query: 374 SLYSKCGNV----VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
S GNV AY I ++ + +Y + + +A G+ E L + M+ GL
Sbjct: 692 SXCKIHGNVEVAEKAAYSIL-QLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGL 749
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 206/627 (32%), Positives = 342/627 (54%), Gaps = 55/627 (8%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N++I A + + +A IF MP + S+ +MI+GF + G F EA
Sbjct: 80 MLERNIFSWNSIICAFTKSG-FLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVY 138
Query: 61 YVNMPAR--------WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY 112
+ M + ++ + A + LK+G + + ++ + DV ++VD Y
Sbjct: 139 FAQMHGHGFLVNEYSFGSALSACAGLQD-LKLGS-QIHSLVYRSNYLSDVYMGSALVDMY 196
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
K GRV A+ +FD+M ++ V+W +++ Y + ++ +F+ M + G+ + +TL
Sbjct: 197 SKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLA 256
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ AC +EG Q+H V + F D+ILGN+++ MY + ++EA +F MM
Sbjct: 257 SVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPI 316
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
R VS S++SGY +++ A +F M KD ++W +I G + G E+++ LF ++
Sbjct: 317 RSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLL 376
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
R+ V P T ++L+A A A L G
Sbjct: 377 K-------------------------------RESVWPTHYTFGNLLNACANLADLQLGR 405
Query: 352 QIHAHVVKMNM------ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
Q H+HV+K +SDV + NSL+ +Y KCG+V + R+F ++ E++ VS+N+MI
Sbjct: 406 QAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIV 465
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G+AQNG G +AL +F KM + G P+ +T + VL AC+H GL++EG YF+SM + +
Sbjct: 466 GYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLM 525
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
P +HY CMVD+LGRAG L EA +LI M+ +P VWG+LL A + H N+ L + +
Sbjct: 526 PLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKK 585
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR---KSPGCSWIILKDKVHL 582
L+E++P+++ PYV+LS++Y+ + RD V +KL R R K PGCSWI ++ ++++
Sbjct: 586 LLEVDPENSGPYVLLSNMYA---ENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNV 642
Query: 583 FLAGRKSCLDLKEIEVTLQTISKGTKE 609
F+ K KEI + L+TI + K+
Sbjct: 643 FMVKDKRHARKKEIYMVLRTILQQMKQ 669
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 153/292 (52%), Gaps = 32/292 (10%)
Query: 161 RGGMAF-NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
+G + F +S + L C R R+ +VH + + F + + N +I +YG+ G +
Sbjct: 11 KGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCV 70
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG 279
D A K+F M +R+ SWNS+I + +G +++A +FE+MP D SW +MI+GF G
Sbjct: 71 DVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHG 130
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+++EA +F +M N+ + S LS
Sbjct: 131 -------------------------------RFDEALVYFAQMHGHGFLVNEYSFGSALS 159
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A A L GSQIH+ V + N SDV + ++LV +YSKCG V A +F + R+ VS
Sbjct: 160 ACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVS 219
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+NS+I+ + QNG +EAL +F +M G+ P+++T SV+SAC + ++EG
Sbjct: 220 WNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEG 271
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/626 (31%), Positives = 340/626 (54%), Gaps = 58/626 (9%)
Query: 15 ALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR-- 69
ALI+ C + +A ++F MP+R+ VS+ ++I+G+ G + EA E+Y R+R
Sbjct: 155 ALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYY----RFRNL 210
Query: 70 ----DSVCSNALISGYLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIE 120
DS ++++ +G EE I ++EK DV+ ++ YCK +I+
Sbjct: 211 GVVPDSYTMSSVLRACGGLGSVEEG-DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLID 269
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
R IFDKM ++ V+W M+ GY +V +E+ LF+ M + +T+T + +ACG
Sbjct: 270 GRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGH 328
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G VH + G++ D N +I MY + G + + +VFS M +D+VSWNS+
Sbjct: 329 LGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSM 388
Query: 241 ISGYVHNGEIEEAYRLFERMP-------------------------GKDF---------- 265
I+ Y+ NG +EA +LF+ M GK+
Sbjct: 389 INVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFN 448
Query: 266 ---VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
V T++ ++ G + S+++F M +D +TW II+ V++E R M
Sbjct: 449 SNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRM 508
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ V P+ T+ S+L + A QG +IH + K+ +ESDV + N L+ +YSKCG++
Sbjct: 509 RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSL 568
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+++++F + +++V++ ++IS G G++A+ F +M+ G+VP+ + F++++ AC
Sbjct: 569 RNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFAC 628
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVEEG YF MK Y IEP EHYAC+VD+L R+ L +A D I SM +P +
Sbjct: 629 SHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSI 688
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WGALL A R + ++A+ ++ ++EL PD YV++S++Y+ +GK +R K
Sbjct: 689 WGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKA 748
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRK 588
+ ++K PGCSW+ +++KV++F G K
Sbjct: 749 RGLKKDPGCSWMEIQNKVYVFGTGTK 774
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 244/472 (51%), Gaps = 48/472 (10%)
Query: 26 AFEIF-ATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR---DSVCSNALISGY 81
+F +F P N + ++I G+F EA LY + R R D+ ++I+
Sbjct: 67 SFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLY-SETQRIRLQPDTYTFPSVINAC 125
Query: 82 LKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ E A I + +++ D+ +++D YC+ + +AR++F++MP ++VV+W
Sbjct: 126 AGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWN 185
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
+++ GY + + +++ R G+ +S T++ + ACG EG +HGL+ +
Sbjct: 186 SLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKI 245
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G D+I+ N +++MY + + + ++F M RDAVSWN++I GY G EE+ +LF
Sbjct: 246 GIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLF 305
Query: 258 ERMPGK---DFVSWTT--------------------MITG---------------FSSKG 279
M + D ++ T+ MIT ++ G
Sbjct: 306 MEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCG 365
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
NL S E+F+ M KD V+W ++I+ ++ N ++EA + F +M++ DV+P+ +T +LS
Sbjct: 366 NLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLS 424
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
S L+ G ++H + KM S++ + N+LV +Y+KCG + D+ ++F N+ R+I++
Sbjct: 425 MSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIIT 484
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+N++I+ + L + +M+ EG+ P+ T LS+L C+ + +G
Sbjct: 485 WNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQG 536
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
Q SS+ A A+ AT Q ++H+ ++ + + V L++ Y+ + ++ +F
Sbjct: 13 QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72
Query: 391 NID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
N+ +NS+I NGL EAL+L+ + + L P+ TF SV++AC
Sbjct: 73 LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC------- 125
Query: 450 EGFIYFKSMKTLYN 463
G + F+ K++++
Sbjct: 126 AGLLDFEMAKSIHD 139
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 337/600 (56%), Gaps = 51/600 (8%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN + Y K R A R+F+ + +V ++ +++ Y K+ V A ++FD+MP+ +
Sbjct: 46 SNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDS 105
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV--QVH 191
V++ ++ Y + + F LFL MR + + TL+ + ACG G+ Q+H
Sbjct: 106 VSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACG----INVGLIRQLH 161
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDAVSWNSLISGYVHNGEI 250
L G D + +GN++IT Y + GF+ EA ++F +S+ RD VSWNS++ Y+ + E
Sbjct: 162 ALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREG 221
Query: 251 EEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIE-------------------- 286
+A L+ M + D + +++T F++ +L ++
Sbjct: 222 SKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGL 281
Query: 287 ----------------LFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEMLRKDVRP 329
+F+ + D V W +ISG+ E +EA F ++ RP
Sbjct: 282 IDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRP 341
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRI 388
+ +L V+SA + ++ +QG Q+H +K+++ S+ +S+ N+L+++YSKCGN+ DA +
Sbjct: 342 DDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTL 401
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + E N VSYNSMI+G+AQ+G+G ++L+LF++M + G P ITF+SVL+AC H G V
Sbjct: 402 FDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRV 461
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
E+G IYF MK + IEP H++CM+D+LGRAG L+EA LI ++ F+P W ALLG
Sbjct: 462 EDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLG 521
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R H N++LA AA L++L+P +A PYV+L+++YS G+ +D VR + + ++K
Sbjct: 522 ACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKK 581
Query: 569 PGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL--GLERDW 626
PGCSWI + ++H+F+A +K+I+ L+ + + K+ + S L G +R W
Sbjct: 582 PGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVW 641
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 190/434 (43%), Gaps = 51/434 (11%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+N +I+A + + A ++F MP ++VSY +I + RRG A +L++ M
Sbjct: 76 SFNTLISAYAKES-YVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134
Query: 68 WRDS---VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG-SMVDGYCKKGRVIEARE 123
+ D S + + + VG + + V+ G +++ Y K G + EAR
Sbjct: 135 FLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARR 194
Query: 124 IFDKMPE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
IF + E ++ V+W +MV YM+ +L+L M G+ + TL + A
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQ 254
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL-GFMDEANKVFSMMSKRDAVSWNSLI 241
G+Q H + + G+ + +G+ +I +Y + G M + KVF +S D V WN++I
Sbjct: 255 DLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMI 314
Query: 242 SGY-VHNGEIEEAYRLFERM---------------------------------------- 260
SGY ++ +EA F ++
Sbjct: 315 SGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDI 374
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
P +I +S GNL + LF+ MPE + V++ ++I+G+ + ++ F
Sbjct: 375 PSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQ 434
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN--MESDVSIQNSLVSLYSK 378
ML P +T SVL+A A T + G +I+ +++K +E + + ++ L +
Sbjct: 435 RMLEMGFTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDLLGR 493
Query: 379 CGNVVDAYRIFTNI 392
G + +A R+ I
Sbjct: 494 AGKLSEAERLIETI 507
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 34/262 (12%)
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R G +H L + L N + +Y + + A +VF + S+N+LIS Y
Sbjct: 25 RTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAY 84
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
+E A++LF+ MP D VS+ T+I ++ +G+ + + +LF M E
Sbjct: 85 AKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA---------- 134
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
F++M + TLS +++A L + Q+HA V ++S
Sbjct: 135 --------------FLDM-------DGFTLSGIITACGINVGLIR--QLHALSVVTGLDS 171
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALNLFRKM 423
VS+ N+L++ YSK G + +A RIF + E R+ VS+NSM+ + Q+ G +AL L+ +M
Sbjct: 172 YVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEM 231
Query: 424 KDEGLVPNQITFLSVLSACNHV 445
GL+ + T SVL+A +V
Sbjct: 232 TVRGLIVDIFTLASVLTAFTNV 253
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 201/438 (45%), Gaps = 55/438 (12%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPM-RNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
NA+IT+ + N + EA IF + R+ VS+ +M+ +++ +A ELY+ M R
Sbjct: 177 NALITSY-SKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRG 235
Query: 69 R--DSVCSNALISGYLKV----GRCEEAARIFEAMVEKDVVAWGSMVDGYCK-KGRVIEA 121
D ++++ + V G + A++ ++ ++ ++D Y K G +++
Sbjct: 236 LIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDC 295
Query: 122 REIFDKMPEKNVVAWTAMVDGY-MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
R++FD++ ++V W M+ GY + D ++ + F ++ G + +L + AC
Sbjct: 296 RKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSN 355
Query: 181 FFRYREGVQVHGLVSRFGFDYD-IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
+G QVHGL + + I + N++I MY + G + +A +F M + + VS+NS
Sbjct: 356 MSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNS 415
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
+I+GY +G ++ LF+RM F +++ +++ + G +E FNMM +K
Sbjct: 416 MIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKF 475
Query: 296 DVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+ ++ +I + EA R IE + D P S++L A
Sbjct: 476 GIEPEAGHFSCMIDLLGRAGKLSEAER-LIETIPFD--PGFFFWSALLGA---------- 522
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
+IH N+E + N L+ L D N Y + + ++ N
Sbjct: 523 CRIHG-----NVELAIKAANRLLQL-----------------DPLNAAPYVMLANIYSDN 560
Query: 411 GLGEEALNLFRKMKDEGL 428
G ++A ++ + M+D G+
Sbjct: 561 GRLQDAASVRKLMRDRGV 578
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L A L G +HA +K + + + N + LYSKC + A R+F + + N+
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
S+N++IS +A+ E A LF DE P+ +++ ++++A G + F F
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLF----DEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 458 MKTLY 462
M+ +
Sbjct: 131 MREAF 135
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 302/549 (55%), Gaps = 40/549 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF-LSM 159
+V S+++ YCK G V +AR +FD MP++N +W+ MV GY C E+ FDLF L +
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 211
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
+ T + A G Q+HGL+ + G + + NS++TMY + G M
Sbjct: 212 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 271
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSW----------- 268
A VF +R++++W+++I+GY NGE + A +F +M F
Sbjct: 272 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331
Query: 269 ----------------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+ ++ ++ G + + E F+ + E D V WT
Sbjct: 332 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 391
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A++SG V N ++EEA + M ++ + P++ T++S L A A A L G Q+H +VK
Sbjct: 392 AMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKY 451
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ + ++L ++YSKCGN+ D +F I +R+++++NS+ISGF+QNG G AL+LF
Sbjct: 452 GLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLF 511
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+MK EG +P+ ITF+++L AC+H+GLV+ G+ YF M Y + P +HYACMVDIL R
Sbjct: 512 EEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSR 571
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA D I S+T + +W +LGA R+ + D+ A + LMEL ++ Y++L
Sbjct: 572 AGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILL 631
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S++Y+ K D RVR +L+ + K PGCSW+ L +VH+F+ G + + + I L
Sbjct: 632 SNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQL 691
Query: 601 QTISKGTKE 609
+ ++K K+
Sbjct: 692 RRLAKHMKD 700
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 150/300 (50%), Gaps = 13/300 (4%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
N+++T C + AF +F + RN+++++AMITG+ + G A ++ M
Sbjct: 259 NSLVTMYAKAGC-MGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGF 317
Query: 65 -PARWRDSVCSNALIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
P + NA G L VG+ + + + E + ++VD Y K G + +A+
Sbjct: 318 TPTEFTFVGVLNASSDLGALAVGK-QAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAK 376
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
E FD++ E ++V WTAMV G+++ E+ L+ M + G+ + T+ AC
Sbjct: 377 EGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIA 436
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G Q+H + ++G +G+++ TMY + G +++ VF + RD ++WNS+IS
Sbjct: 437 ALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIIS 496
Query: 243 GYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
G+ NG A LFE M + D +++ ++ S G +++ E F++M + +T
Sbjct: 497 GFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLT 556
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 145/311 (46%), Gaps = 38/311 (12%)
Query: 281 LEKSIELFNMMPE--KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
L + +F+ +P +D +W ++++ + + R+ + V P+ + ++
Sbjct: 65 LAAAFAVFDDIPPAARDVASWNSLLNPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAF 124
Query: 339 SASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+A+A A+ G+ HA K+ + S+V + SL+++Y K G V DA R+F + +RN
Sbjct: 125 TAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNS 184
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP---NQITFLSVLSACN----------- 443
S+++M++G+A EEA +LFR M +E P ++ +VLSA +
Sbjct: 185 FSWSTMVAGYAAEKCSEEAFDLFRLMLEE--CPSEKSEFVATAVLSAVSVPLGLLMGEQM 242
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H +V++G + F S++ +V + +AG + A + S + E W
Sbjct: 243 HGLIVKDGLLDFVSVEN------------SLVTMYAKAGCMGAAFHVFES-SRERNSITW 289
Query: 504 GALLGAGRTHLNLD--LAKLAAQHLMELEPDSATPYVVL---SDLYSV-IGKKRDGNRVR 557
A++ + D ++ + H P T VL SDL ++ +GK+ G V+
Sbjct: 290 SAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVK 349
Query: 558 MKKKLKRIRKS 568
+ +++ KS
Sbjct: 350 LGFEVQIYVKS 360
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/639 (33%), Positives = 339/639 (53%), Gaps = 52/639 (8%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW- 68
NA+++ + + EA+ +F M R+ S+ ++ G+ + G F EA LY M W
Sbjct: 133 NALLSMFVRFG-DLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRM--LWV 189
Query: 69 --RDSV----CSNALISGYLKVGRCEEAA-RIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
R V C G + R E + E DV +++ Y K G + A
Sbjct: 190 GIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSA 249
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
R +FD+MP ++ ++W AM+ GY + D +G LF MR + + +T+T + AC
Sbjct: 250 RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEAL 309
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
R G +VHG V + GF ++ + NS+I M+ +G DEA VFS M +D VSW ++I
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMI 369
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVS---------------------------------- 267
SGY NG E+A + M + V
Sbjct: 370 SGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLT 429
Query: 268 -----WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
++I +S ++K++E+F+ +P K+ ++WT+II G N + EA +F +M
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM 489
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ ++PN +TL SVLSA A L+ G +IHAH ++ + D + N+L+ +Y +CG +
Sbjct: 490 ILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRM 548
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A+ F N E+++ S+N +++G+AQ G G A+ LF KM + + P++ITF S+L AC
Sbjct: 549 EPAWNQF-NSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCAC 607
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+ G+V +G YF+SM+ ++I P +HYA +VD+LGRAG L +A + I M +P P +
Sbjct: 608 SRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAI 667
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WGALL A R + N++L +LAAQH+ E++ S Y++L +LY+ GK + RVR +
Sbjct: 668 WGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRE 727
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
R+ PGCSW+ + +VH FL G +KEI L+
Sbjct: 728 NRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLE 766
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 209/427 (48%), Gaps = 48/427 (11%)
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
SM+ ++ T L C EG +VH VS+ + LGN++++M+ R G
Sbjct: 84 SMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFG 143
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG--------- 262
+ EA VF M++RD SWN L+ GY G +EA L+ RM P
Sbjct: 144 DLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLR 203
Query: 263 ------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
D +IT + G++ + +F+ MP +D ++
Sbjct: 204 TCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRIS 263
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISG+ N+ E R F M V P+ +T++SV+SA A G ++H +V+
Sbjct: 264 WNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVI 323
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K ++VS+ NSL+ ++S G +A +F+ ++ +++VS+ +MISG+ +NGL E+A+
Sbjct: 324 KTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVE 383
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF----KSMKTLYNIEPGPEHYACM 474
+ M+ EG+VP++IT SVLSAC +GL+++G + ++ T Y I +
Sbjct: 384 TYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANS-----L 438
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
+D+ + + +A+++ + + + +LG + + + Q ++ L+P+S
Sbjct: 439 IDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSV 498
Query: 535 TPYVVLS 541
T VLS
Sbjct: 499 TLVSVLS 505
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 337/639 (52%), Gaps = 66/639 (10%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD------------SVCSNALISG 80
MP RN VS+ ++I+G+ + G ++E L+ AR D SVC L
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLF--KEARMSDLRLDKFTFSNALSVCGRTL--- 55
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
L++GR A I + + V+ S++D YCK GR+ AR +F+ E + V+W +++
Sbjct: 56 DLRLGRLIHAL-ITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 114
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR--YREGVQVHGLVSRFG 198
GY+++ ++ L + M R G+ NS L +ACG F G +HG + G
Sbjct: 115 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLG 174
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI------EE 252
D D+++G +++ Y ++G +++A K+F +M + V +N++I+G++ + E
Sbjct: 175 LDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEA 234
Query: 253 AYRLFE---------------------------------------RMPGKDFVSWTTMIT 273
Y FE + +F+ ++
Sbjct: 235 MYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIG-NALVE 293
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+S G++E ++ F+ P+ D V+WT++I G V N Q+E F E+L +P++ T
Sbjct: 294 LYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFT 353
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+S +LSA A A + G QIHA+ +K + + IQNS + +Y+KCG++ A F
Sbjct: 354 ISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETK 413
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+IVS++ MIS AQ+G +EA++LF MK G+ PN ITFL VL AC+H GLVEEG
Sbjct: 414 NPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLR 473
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
YF+ MK + I P +H AC+VD+LGRAG LAEA I FE P +W +LL A R H
Sbjct: 474 YFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVH 533
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
D K A+ ++ELEP++A YV+L ++Y+ G + +R K + ++K PG SW
Sbjct: 534 KATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSW 593
Query: 574 IILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
I + + VH F+AG +S + + I V L+ + + K+ D+
Sbjct: 594 IEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDY 632
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 179/406 (44%), Gaps = 25/406 (6%)
Query: 14 TALINNNCSI---YEAFEIFATMPMRNAVSYAAMITGFVRRGMF---YEAEELYVNMPAR 67
TAL++ I +A +IF MP N V Y AMI GF++ + E +Y+ +
Sbjct: 183 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 242
Query: 68 WRDSVCSNALISGYLKVGRCEEA--------ARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
R S S LK EA A+IF+ ++ D ++V+ Y G +
Sbjct: 243 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIE 302
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+ + F P+ +VV+WT+++ G+++ FE G LF + G + T++I+ AC
Sbjct: 303 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACA 362
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
+ G Q+H + G I+ NS I MY + G +D AN F D VSW+
Sbjct: 363 NLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSV 422
Query: 240 LISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
+IS +G +EA LFE M G + +++ ++ S G +E+ + F +M +
Sbjct: 423 MISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDH 482
Query: 296 DVT----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+T +A I + FI + + + S+LSA + G
Sbjct: 483 GITPNVKHSACIVDLLGRAGRLAEAESFI--MDSGFEGDPVMWRSLLSACRVHKATDTGK 540
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
++ V+++ E+ S L ++Y+ G + A I + +R +
Sbjct: 541 RVAERVIELEPEAAASYV-LLYNIYNDAGIQMPATEIRNLMKDRGV 585
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/639 (33%), Positives = 339/639 (53%), Gaps = 52/639 (8%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW- 68
NA+++ + + EA+ +F M R+ S+ ++ G+ + G F EA LY M W
Sbjct: 133 NALLSMFVRFG-DLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRM--LWV 189
Query: 69 --RDSV----CSNALISGYLKVGRCEEAA-RIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
R V C G + R E + E DV +++ Y K G + A
Sbjct: 190 GIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSA 249
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
R +FD+MP ++ ++W AM+ GY + D +G LF MR + + +T+T + AC
Sbjct: 250 RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEAL 309
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
R G +VHG V + GF ++ + NS+I M+ +G DEA VFS M +D VSW ++I
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMI 369
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVS---------------------------------- 267
SGY NG E+A + M + V
Sbjct: 370 SGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLT 429
Query: 268 -----WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
++I +S ++K++E+F+ +P K+ ++WT+II G N + EA +F +M
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM 489
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ ++PN +TL SVLSA A L+ G +IHAH ++ + D + N+L+ +Y +CG +
Sbjct: 490 ILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRM 548
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A+ F N E+++ S+N +++G+AQ G G A+ LF KM + + P++ITF S+L AC
Sbjct: 549 EPAWNQF-NSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCAC 607
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+ G+V +G YF+SM+ ++I P +HYA +VD+LGRAG L +A + I M +P P +
Sbjct: 608 SRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAI 667
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WGALL A R + N++L +LAAQH+ E++ S Y++L +LY+ GK + RVR +
Sbjct: 668 WGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRE 727
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
R+ PGCSW+ + +VH FL G +KEI L+
Sbjct: 728 NRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLE 766
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 209/427 (48%), Gaps = 48/427 (11%)
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
SM+ ++ T L C EG +VH VS+ + LGN++++M+ R G
Sbjct: 84 SMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFG 143
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG--------- 262
+ EA VF M++RD SWN L+ GY G +EA L+ RM P
Sbjct: 144 DLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLR 203
Query: 263 ------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
D +IT + G++ + +F+ MP +D ++
Sbjct: 204 TCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRIS 263
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISG+ N+ E R F M V P+ +T++SV+SA A G ++H +V+
Sbjct: 264 WNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVI 323
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K ++VS+ NSL+ ++S G +A +F+ ++ +++VS+ +MISG+ +NGL E+A+
Sbjct: 324 KTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVE 383
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF----KSMKTLYNIEPGPEHYACM 474
+ M+ EG+VP++IT SVLSAC +GL+++G + ++ T Y I +
Sbjct: 384 TYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANS-----L 438
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
+D+ + + +A+++ + + + +LG + + + Q ++ L+P+S
Sbjct: 439 IDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSV 498
Query: 535 TPYVVLS 541
T VLS
Sbjct: 499 TLVSVLS 505
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/664 (31%), Positives = 340/664 (51%), Gaps = 90/664 (13%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVC-SNALISGYLKV 84
A ++F MP RN ++ MI + R + EA ++ M + VC N + L+V
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRM---LKIGVCPDNFTFASALRV 184
Query: 85 --------GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
G + +++ + D +++D Y K ++FD+M E+N V W
Sbjct: 185 CGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTW 244
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRG--GMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+++ + F D LFL M+ G+ + T T L C +G Q+H +
Sbjct: 245 NSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 304
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
R +II+ ++ MY G ++ A ++F+ M++R+A SWNS+I GY NGE +EA
Sbjct: 305 IRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEAL 364
Query: 255 RLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMM------------------- 291
RLF++M D S ++M++ S + +K EL N +
Sbjct: 365 RLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMY 424
Query: 292 ------------------PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+++ W +I++G+ N +E+F F+EML D+ + LT
Sbjct: 425 AKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLT 484
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ ++++ + ++ +LV +YSKCG + A +F N++
Sbjct: 485 MVTIVNL-------------------------LVLETALVDMYSKCGAITKARTVFDNMN 519
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+NIVS+N+MISG++++G +EAL L+ +M +G+ PN++TFL++LSAC+H GLVEEG
Sbjct: 520 GKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLR 579
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
F SM+ YNIE EHY CMVD+LGRAG L +A + + M EP WGALLGA R H
Sbjct: 580 IFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVH 639
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
++D+ +LAAQ L EL+P + PYV++S++Y+ G+ ++ +R K+K ++K PG SW
Sbjct: 640 KDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSW 699
Query: 574 IILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLERDWSYTADNI 633
I + ++ +F AG K+ +EI L+ ++ +K LG D S+ N+
Sbjct: 700 IEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKG----------LGYIPDTSFILQNV 749
Query: 634 KRIK 637
K IK
Sbjct: 750 KDIK 753
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 14 TALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--W 68
TAL++ + C +I +A +F M +N VS+ AMI+G+ + G EA LY MP + +
Sbjct: 496 TALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMY 555
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEARE 123
+ V A++S G EE RIF +M +E + MVD + GR+ +A+E
Sbjct: 556 PNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKE 615
Query: 124 IFDKMP-EKNVVAWTAMV 140
+KMP E V W A++
Sbjct: 616 FVEKMPIEPEVSTWGALL 633
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD- 384
DV P L SS++ + + +G IH ++ D + ++ LY++ G + D
Sbjct: 68 DVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125
Query: 385 --AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A ++F + ERN+ ++N+MI +A+ EA +F +M G+ P+ TF S L C
Sbjct: 126 CYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVC 185
>gi|356541211|ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 548
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/555 (36%), Positives = 318/555 (57%), Gaps = 27/555 (4%)
Query: 34 PMRNAVSYAAMITGFVRRGMFYEAEELY---VNMPARWRDSVCSNALISGYLKVGRCEEA 90
P+R + A G + R F E Y ++M AR R L G+ A
Sbjct: 4 PLRRNATLLA-TNGIISRHFFRSEPESYAELIDMYARDRA-----------LHAGKKLHA 51
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+ +VVA ++V Y G++ AR++FDK+P NV W A++ + ++
Sbjct: 52 HLVTNGFARFNVVA-SNLVSFYTCCGQLSHARKLFDKIPTTNVRRWIALIGSCARCGFYD 110
Query: 151 DGFDLFLSMRR-GGMAFNSI-TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
+F M+ G+ N + + + +ACG G ++HG + + F+ D + +S
Sbjct: 111 HALAVFSEMQAVQGLTPNYVFVIPSVLKACGHVGDRITGEKIHGFILKCSFELDSFVSSS 170
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKD 264
+I MY + +++A KVF M+ +D V+ N++++GYV G EA L E M +
Sbjct: 171 LIVMYSKCAKVEDARKVFDGMTVKDTVALNAVVAGYVQQGAANEALGLVESMKLMGLKPN 230
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMM----PEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
V+W ++I+GFS KG+ + E+F +M E D V+WT++ISGFV N + +EAF F
Sbjct: 231 VVTWNSLISGFSQKGDQGRVSEIFRLMIADGVEPDVVSWTSVISGFVQNFRNKEAFDTFK 290
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+ML P T+S++L A A A ++ G +IH + + +E D+ ++++LV +Y+KCG
Sbjct: 291 QMLSHGFHPTSATISALLPACATAARVSVGREIHGYALVTGVEGDIYVRSALVDMYAKCG 350
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP-NQITFLSVL 439
+ +A +F+ + E+N V++NS+I GFA +G EEA+ LF +M+ EG+ + +TF + L
Sbjct: 351 FISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAIELFNQMEKEGVAKLDHLTFTAAL 410
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
+AC+HVG E G FK M+ Y+IEP EHYACMVD+LGRAG L EA +I +M EP
Sbjct: 411 TACSHVGDFELGQRLFKIMQEKYSIEPRLEHYACMVDLLGRAGKLHEAYCMIKTMPIEPD 470
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
VWGALL A R H +++LA++AA HLMELEP+SA ++LS +Y+ GK RV+ +
Sbjct: 471 LFVWGALLAACRNHRHVELAEVAAMHLMELEPESAANPLLLSSVYADAGKWGKFERVKKR 530
Query: 560 KKLKRIRKSPGCSWI 574
K ++RK G SWI
Sbjct: 531 IKKGKLRKLQGLSWI 545
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW---RDSVCSNALIS 79
I EA +F+ MP +N V++ ++I GF G EA EL+ M D + A ++
Sbjct: 352 ISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAIELFNQMEKEGVAKLDHLTFTAALT 411
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVA-----WGSMVDGYCKKGRVIEAREIFDKMP-EKNV 133
VG E R+F+ M EK + + MVD + G++ EA + MP E ++
Sbjct: 412 ACSHVGDFELGQRLFKIMQEKYSIEPRLEHYACMVDLLGRAGKLHEAYCMIKTMPIEPDL 471
Query: 134 VAWTAMV 140
W A++
Sbjct: 472 FVWGALL 478
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/632 (31%), Positives = 341/632 (53%), Gaps = 53/632 (8%)
Query: 26 AFEIFATMPMRN-AVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI------ 78
A ++F M +RN VS+ ++I+ + GM EA L+ M + V +N
Sbjct: 112 ARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEM---LKAGVVTNTYTFAAALQ 168
Query: 79 ----SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
S ++K+G AA I ++ DV ++V Y + G++ EA IF + K++V
Sbjct: 169 ACEDSSFIKLGMQIHAA-ILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIV 227
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W +M+ G+++ + + + F ++ + + +++ + A GR G ++H
Sbjct: 228 TWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYA 287
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN------- 247
+ GFD +I++GN++I MY + M + F +M+ +D +SW + +GY N
Sbjct: 288 IKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQAL 347
Query: 248 -------------------------------GEIEEAYRLFERMPGKDFVSWTTMITGFS 276
G+I+E + R D V T+I +
Sbjct: 348 ELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYG 407
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G ++ ++ +F + KD V+WT++IS +V+N +A F M + P+ +TL S
Sbjct: 408 ECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVS 467
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+LSA + +TL +G +IH +++ + SI N+LV +Y++CG+V DAY+IFT RN
Sbjct: 468 ILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRN 527
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
++ + +MIS + +G GE A+ LF +MKDE ++P+ ITFL++L AC+H GLV EG + +
Sbjct: 528 LILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLE 587
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
MK Y +EP PEHY C+VD+LGR L EA ++ SM EP P VW ALLGA R H N
Sbjct: 588 IMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNK 647
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
++ ++AA+ L+EL+ D+ YV++S++++ G+ +D VRM+ K + K+PGCSWI +
Sbjct: 648 EIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEV 707
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+K+H FL+ K + +I L +++ K
Sbjct: 708 GNKIHAFLSRDKLHPECDKIYQKLAQVTEKLK 739
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 234/486 (48%), Gaps = 53/486 (10%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G V++A IFDKM E+++ W AM+ GY+ +++ MR G++F+S T
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+L +ACG G ++HGL ++G D + + NS++ +Y + ++ A K+F M
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121
Query: 232 R-DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT--------------------- 269
R D VSWNS+IS Y NG EA LF M V+ T
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQ 181
Query: 270 ------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
++ + G + ++ +F + KD VTW ++++GF+ N
Sbjct: 182 IHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGL 241
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
Y EA +F ++ D++P+Q+++ S++ AS L G +IHA+ +K +S++ + N+
Sbjct: 242 YSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNT 301
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
L+ +Y+KC + R F + ++++S+ + +G+AQN +AL L R+++ EG+ +
Sbjct: 302 LIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVD 361
Query: 432 QITFLSVLSAC---NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
S+L AC N +G ++E Y T+ P ++D+ G G + A+
Sbjct: 362 ATMIGSILLACRGLNCLGKIKEIHGY-----TIRGGLSDPVLQNTIIDVYGECGIIDYAV 416
Query: 489 DLINSMTFEPPPGVWGALLGAGRTH---LNLDLAKLAAQHLMELEPDSATPYVVLSDLYS 545
+ S+ + W +++ H N L ++ LEPD T +LS + S
Sbjct: 417 RIFESIECKDVVS-WTSMISC-YVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCS 474
Query: 546 VIGKKR 551
+ K+
Sbjct: 475 LSTLKK 480
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 167/332 (50%), Gaps = 48/332 (14%)
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--GKDFVSWT 269
MYG+ G + +A +F MS+R +WN+++ GYV NGE A ++ M G F S+T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 270 -------------------------------------TMITGFSSKGNLEKSIELFNMMP 292
+++ ++ ++ + +LF+ M
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 293 EKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
++D V+W +IIS + N EA F EML+ V N T ++ L A ++ + G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
QIHA ++K DV + N+LV++Y + G + +A IF N++ ++IV++NSM++GF QNG
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLY--NIEPGP 468
L EAL F +++ L P+Q++ +S++ A +G + G I+ ++K + NI G
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300
Query: 469 ---EHYA--CMVDILGRAGSLAEAIDLINSMT 495
+ YA C + GRA L DLI+ T
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTT 332
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 174/372 (46%), Gaps = 48/372 (12%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARWR-DSVCSNALIS--- 79
EA IF + ++ V++ +M+TGF++ G++ EA E + ++ A + D V ++I
Sbjct: 213 EAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASG 272
Query: 80 --GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
GYL G+ E A + + +++ +++D Y K + FD M K++++WT
Sbjct: 273 RLGYLLNGK-EIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWT 331
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
GY + C+ +L ++ GM ++ + + AC + ++HG R
Sbjct: 332 TAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRG 391
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G D +L N+II +YG G +D A ++F + +D VSW S+IS YVHNG +A +F
Sbjct: 392 GLS-DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVF 450
Query: 258 ERMPGK----DFVSWTTMITG-----------------------------------FSSK 278
M D+V+ ++++ ++
Sbjct: 451 SSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARC 510
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G++E + ++F ++ + WTA+IS + + E A F+ M + + P+ +T ++L
Sbjct: 511 GSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALL 570
Query: 339 SASAATATLNQG 350
A + + +N+G
Sbjct: 571 YACSHSGLVNEG 582
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 131/280 (46%), Gaps = 9/280 (3%)
Query: 21 CSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD---SVCSNAL 77
C + F M ++ +S+ G+ + + +A EL + D ++ + L
Sbjct: 310 CCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSIL 369
Query: 78 IS--GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
++ G +G+ +E D V +++D Y + G + A IF+ + K+VV+
Sbjct: 370 LACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVS 429
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT+M+ Y+ ++F SM+ G+ + +TL + A ++G ++HG +
Sbjct: 430 WTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFII 489
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R GF + + N+++ MY R G +++A K+F+ R+ + W ++IS Y +G E A
Sbjct: 490 RKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVE 549
Query: 256 LFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
LF RM + D +++ ++ S G + + +M
Sbjct: 550 LFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIM 589
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 202/603 (33%), Positives = 319/603 (52%), Gaps = 60/603 (9%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------------PARWRDSVCSNA 76
+F MP RN S+ A+++ V G F EA L+ + P + +C
Sbjct: 116 VFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLK--LCGGL 173
Query: 77 LISGYLKVGR---------CEE---AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
+ L++GR C + A +IF K+VV++ +M+ GYC+ G V +A+E+
Sbjct: 174 RV---LELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKEL 230
Query: 125 FDKMP--EKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRF 181
FD+M K+ ++W +M+ GY F++ +F + G+ +S TL + AC
Sbjct: 231 FDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADM 290
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
R G +VH G ++ +G +++ MY + + A F +++RD +WN LI
Sbjct: 291 ASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLI 350
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
SGY ++E L ++M G F E + TW
Sbjct: 351 SGYACCNQLENIQNLIQKMKGDGF---------------------------EPNVYTWNG 383
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
IISG V N E A R F EM +RP+ T+ +L A A AT+ +G Q+HAH ++
Sbjct: 384 IISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQG 443
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
E DV I +LV +Y+KCG++ A +++ I N+VS N+M++ +A +G G+E + LFR
Sbjct: 444 YELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFR 503
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
M G P+ +TFLSVLS+C H G VE G +F M T YN+ P +HY C+VD+L RA
Sbjct: 504 NMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRA 562
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L EA +L+ + +P +WGALLG N++L ++AA+ L+ELEP++ YV+L+
Sbjct: 563 GRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLA 622
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
+LY+ G+ D +R R K + + KSPGCSWI ++ +H+FL+ KS ++I TL
Sbjct: 623 NLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLD 682
Query: 602 TIS 604
++
Sbjct: 683 NLN 685
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 164/350 (46%), Gaps = 58/350 (16%)
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+S T L E+C G QVH + GF + ++ MYGR G +D+AN V
Sbjct: 60 IDSSTYASLLESCRTL---NLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLV 116
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF-------------------- 265
F M +R+ SW +++S +V +G EEA LFE++ D
Sbjct: 117 FVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVL 176
Query: 266 --------------------------------VSWTTMITGFSSKGNLEKSIELFNMMP- 292
VS+ TMI G+ GN+EK+ ELF+ M
Sbjct: 177 ELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMEL 236
Query: 293 -EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQG 350
KD ++W ++ISG+ +N ++EA F ++L ++ + + TL SVL+A A A+L +G
Sbjct: 237 VGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRG 296
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
++HA V + + + +LV +YSKC ++ A F + ER+ ++N +ISG+A
Sbjct: 297 KEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACC 356
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
E NL +KMK +G PN T+ ++S G E F M+T
Sbjct: 357 NQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQT 406
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 161/384 (41%), Gaps = 85/384 (22%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +IF+ ++N VSY MI G+ G +A+EL+ M +D++ N++ISGY
Sbjct: 196 ALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNL 255
Query: 86 RCEEAARIF-----EAMVEKDVVAWGSMVDGYC-----KKGRVIEAREI----------- 124
+EA +F E +E D GS++ ++G+ + A+ +
Sbjct: 256 LFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVG 315
Query: 125 -------------------FDKMPEKNVVAWTAMVDGYMKVDCFE-----------DGFD 154
FD + E++ W ++ GY + E DGF+
Sbjct: 316 GALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFE 375
Query: 155 ------------------------LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
LF M+ + + T+ I+ AC R G QV
Sbjct: 376 PNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQV 435
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H R G++ D+ +G +++ MY + G + A +V++ +S + VS N++++ Y +G
Sbjct: 436 HAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHG 495
Query: 251 EEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTA 301
+E LF M G D V++ ++++ G +E E F++M +VT +T
Sbjct: 496 DEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYY-NVTPSLKHYTC 554
Query: 302 IISGFVNNEQYEEAFRWFIEMLRK 325
I+ + +EA+ ++ RK
Sbjct: 555 IVDLLSRAGRLDEAYELVKKIPRK 578
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%)
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
Q+ S+ S + TLN G Q+HAH +K ++ L+ +Y + G + DA +F
Sbjct: 59 QIDSSTYASLLESCRTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFV 118
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ +RN+ S+ +++S +G EEAL+LF K++ + + F VL C + ++E
Sbjct: 119 KMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLEL 178
Query: 451 G 451
G
Sbjct: 179 G 179
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/617 (32%), Positives = 336/617 (54%), Gaps = 53/617 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVR-----RGM--FYEAEELYVNMPARWRDSV-- 72
S+ ++ ++F+ +P +N +S++A I G V+ RG+ F E + + + SV
Sbjct: 207 SLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFR 266
Query: 73 -CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
C+ S C F + DV+ + +D Y K + +A ++F +P+
Sbjct: 267 SCAGLSASRLGTQLHCHALKTDFGS----DVIVGTATLDMYAKCDNMSDAYKLFSLLPDH 322
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
N+ ++ AM+ GY + + F LFL +++ +F+ ++L+ A + EG+Q+H
Sbjct: 323 NLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLH 382
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN---- 247
GL + +I + N+I+ MYG+ G + EA+ +F M RD VSWN++I+ N
Sbjct: 383 GLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEG 442
Query: 248 ---------------------GEIEEAY--------------RLFERMPGKDFVSWTTMI 272
G + +A R+ + G + ++
Sbjct: 443 KTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALV 502
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
+S G +E++ ++ + E+ V+W AIISGF ++ E++ R+F ML V P+
Sbjct: 503 DMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNF 562
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T ++VL A AT+ G QIHA ++K+ + SDV I ++LV +YSKCGN+ D+ +F
Sbjct: 563 TYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKA 622
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+R+ V++N+MI GFA +GLGEEAL LF M E + PN TF+SVL AC+HVG ++G
Sbjct: 623 PKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGL 682
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
YF+ M ++Y +EP EHY+CMVDILGR+G + EA+ LI M FE +W LL +
Sbjct: 683 FYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKI 742
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
N+++A+ AA L++L+P+ ++ Y +LS++Y+ G + +++R + ++K PGCS
Sbjct: 743 QGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCS 802
Query: 573 WIILKDKVHLFLAGRKS 589
WI +KD+VH FL K+
Sbjct: 803 WIEVKDEVHTFLVCDKA 819
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 275/533 (51%), Gaps = 50/533 (9%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-N 132
+N LI Y+K E A ++FE M ++D+V+W +MV G GR+ A+ +F+ MP +
Sbjct: 62 TNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGD 121
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VV+W +++ GY++ + +FL MR G+ F+ TL + + C G+Q+HG
Sbjct: 122 VVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHG 181
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ + GFDYD++ G++++ MY + ++++ VFS + ++ +SW++ I+G V N ++
Sbjct: 182 IAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLR 241
Query: 253 AYRLFERMP---------------------------------------GKDFVSWTTMIT 273
+LF+ M G D + T +
Sbjct: 242 GLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLD 301
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ N+ + +LF+++P+ + ++ A+I G+ NEQ +AF+ F+++ + ++++
Sbjct: 302 MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 361
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
LS LSA+A ++G Q+H +K N+ S++ + N+++ +Y KCG +V+A +F ++
Sbjct: 362 LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 421
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF- 452
R+ VS+N++I+ QN + L+ F M + P++ T+ SVL AC G
Sbjct: 422 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 481
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
++ + +K+ ++ + +VD+ + G + EA + I+ E W A++
Sbjct: 482 VHGRIIKSGMGLKMFVG--SALVDMYSKCGMMEEA-EKIHYRLEEQTMVSWNAIISGFSL 538
Query: 513 HLNLDLAKLAAQHLMEL--EPDSATPYVVL---SDLYSV-IGKKRDGNRVRMK 559
+ ++ H++E+ EPD+ T VL ++L +V +GK+ ++++
Sbjct: 539 QKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLE 591
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 160/619 (25%), Positives = 284/619 (45%), Gaps = 96/619 (15%)
Query: 21 CSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISG 80
C++ A+++F MP R+ VS+ M+ G G A+ ++ +MP D V N+LISG
Sbjct: 73 CALEYAYKVFEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHG-DVVSWNSLISG 131
Query: 81 YLKVGRCEEAARIFEAM---------------------------------------VEKD 101
YL+ G +++ +F M + D
Sbjct: 132 YLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYD 191
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
VV ++VD Y K + ++ ++F ++P+KN ++W+A + G ++ D G LF M+R
Sbjct: 192 VVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQR 251
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
G+ + T +F +C R G Q+H + F D+I+G + + MY + M +
Sbjct: 252 KGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSD 311
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----------VSWTTM 271
A K+FS++ + S+N++I GY N + +A++LF ++ F +S +
Sbjct: 312 AYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAV 371
Query: 272 ITGFSS---------KGNLEKSI--------------------ELFNMMPEKDDVTWTAI 302
I G S K NL +I LF+ M +D V+W AI
Sbjct: 372 IKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAI 431
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
I+ NE + F MLR + P++ T SVL A A + G ++H ++K M
Sbjct: 432 ITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGM 491
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+ + ++LV +YSKCG + +A +I ++E+ +VS+N++ISGF+ E++ F
Sbjct: 492 GLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSH 551
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY--ACMVDILGR 480
M + G+ P+ T+ +VL C ++ V G M L E + Y + +VD+ +
Sbjct: 552 MLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKL---ELLSDVYITSTLVDMYSK 608
Query: 481 AGSLAEAIDLINSMTFEPPPG----VWGALLGAGRTH-LNLDLAKLAAQHLME-LEPDSA 534
G++ +++ + F P W A++ H L + +L L E ++P+ A
Sbjct: 609 CGNMHDSL-----LMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHA 663
Query: 535 TPYVVLSDLYSVIGKKRDG 553
T +V + S +G + G
Sbjct: 664 T-FVSVLRACSHVGNAKKG 681
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 203/449 (45%), Gaps = 85/449 (18%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + +F+ C + G + H + GF + + N +I MY + ++ A KVF M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 230 SKRD--------------------------------AVSWNSLISGYVHNGEIEEAYRLF 257
+RD VSWNSLISGY+ NG+I+++ +F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 258 ERMPG---------------------------------------KDFVSWTTMITGFSSK 278
+M D V+ + ++ ++
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+LE S+++F+ +P+K+ ++W+A I+G V N+Q + F EM RK + +Q T +SV
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+ A + G+Q+H H +K + SDV + + + +Y+KC N+ DAY++F+ + + N+
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
SYN+MI G+A+N G +A LF +++ ++++ LSA + EG + +
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEG-LQLHGL 384
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA-------GR 511
N+ ++D+ G+ G+L EA L + M P W A++ A G+
Sbjct: 385 AIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVS-WNAIITACEQNESEGK 443
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVL 540
T L+ A ++EPD T VL
Sbjct: 444 T-----LSHFGAMLRSKMEPDEFTYGSVL 467
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 220/647 (34%), Positives = 330/647 (51%), Gaps = 92/647 (14%)
Query: 14 TALINNNCSIY-------EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA 66
T L+N S Y EA +F +P+RN SY A+++ + R G EA L+ +P
Sbjct: 52 TFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPD 111
Query: 67 RWRDSVCSNALISGYLKVGRCE--EAARIFEAM--------------------VEKDV-- 102
D NA+++ + GR +A R AM EKD+
Sbjct: 112 P--DQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRT 169
Query: 103 ----------------VAWGS-MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
V G+ +VD Y K R ++AR +FD MPE+NVV+W +++ Y +
Sbjct: 170 GEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQ 229
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LVSRFGFDYDII 204
+ LF+ M G + +TL+ + AC REG QVH +V R D++
Sbjct: 230 NGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMV 289
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
L N+++ M Y G EA +F+ MP +
Sbjct: 290 LNNALVDM-------------------------------YAKCGRTWEARCIFDSMPSRS 318
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
VS T+++ G++ N+E + +F+ M EK+ + W +I+ + N + EEA R F+++ R
Sbjct: 319 VVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKR 378
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK------MNMESDVSIQNSLVSLYSK 378
+ P T +VL+A A L G Q H HV+K ESDV + NSLV +Y K
Sbjct: 379 DSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK 438
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
G++ D ++F + R+ VS+N+MI G+AQNG ++AL+LF +M P+ +T + V
Sbjct: 439 TGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGV 498
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSAC H GLV+EG +F M + I P +HY CMVD+LGRAG L EA +LI M EP
Sbjct: 499 LSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEP 558
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
+W +LLGA R H N++L + A L EL+P+++ PYV+LS++Y+ +GK D RVR
Sbjct: 559 DSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRR 618
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLA--GRKSCLDLKEIEVTLQTI 603
K + + K PGCSWI + K+++FLA R C + EI TL+ I
Sbjct: 619 SMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRN--EIHSTLRII 663
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 140/305 (45%), Gaps = 29/305 (9%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
HG V + + L N++++ Y RLG + EA +VF + R+ S+N+L+S Y G
Sbjct: 39 AHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGR 98
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+EA LFE +P D S+ ++ + G
Sbjct: 99 PDEARALFEAIPDPDQCSYNAVVAALARHGRGHAG------------------------- 133
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
+A R+ M D N + +S LSA AA L G Q+H V + DV I
Sbjct: 134 ----DALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIG 189
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+LV +Y+KC VDA R+F + ERN+VS+NS+I+ + QNG EAL LF +M G
Sbjct: 190 TALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFF 249
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
P+++T SV+SAC + EG M + +VD+ + G EA
Sbjct: 250 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARC 309
Query: 490 LINSM 494
+ +SM
Sbjct: 310 IFDSM 314
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/620 (31%), Positives = 323/620 (52%), Gaps = 76/620 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-------------------- 65
A ++F + NA + ++I G+V + EA L++ M
Sbjct: 54 AHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALAR 113
Query: 66 -ARWR----------------DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
R++ D + N+++ +++ + + A + F+ M EKD+V+W M
Sbjct: 114 LTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMM 173
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
+ GY RV AR+ FD+MPE+NVV+WT+M+ GY+K M + F+S
Sbjct: 174 ISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAG----------DMAEAQVLFDS 223
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
+ + D+ N +++ Y +G A +F
Sbjct: 224 MPVK-----------------------------DLASWNVMVSGYMDIGDCVNARIIFGK 254
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
M D SWN +ISG+ GE+E A F+RMP K+ +SW M+ G+ G+ + LF
Sbjct: 255 MPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLF 314
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ MP K+ VTW+ +I G+ N Q +A F +D++P++ + ++SA + ++
Sbjct: 315 DQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIID 374
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
I + V ++ SD+ + SL+ +Y+KCG++ A ++F ++++ Y++MI+ A
Sbjct: 375 AAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALA 434
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
+GLG +A+ LF KM+ + P+ +TFL VL+ACNH GLV+EG YFK M + I+P
Sbjct: 435 NHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSE 494
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
+HYAC+VD+LGR G L EA +LI +M P VWGALL A R H N+ LA++AA L +
Sbjct: 495 KHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFK 554
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
+EPD++ Y++LS++Y+ G+ +VR K + R+RK+ G SWI L VH F+ G
Sbjct: 555 IEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDM 614
Query: 589 SCLDLKEIEVTLQTISKGTK 608
S D I + L + + K
Sbjct: 615 SHTDSDSISLILYLLCEDMK 634
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 225/416 (54%), Gaps = 23/416 (5%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
LK + A + E+ V ++ Y + G A ++FD++ + N WT+++
Sbjct: 15 LKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIH 74
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY++ +++ F LF+ MRR ++ + T++ + +A R R++ G V+G V ++GF +
Sbjct: 75 GYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAF 134
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D+I+ NS++ ++ R +D A + F M ++D VSWN +ISGY +N ++ A + F+RMP
Sbjct: 135 DLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMP 194
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
++ VSWT+MI G+ G++ ++ LF+ MP KD +W ++SG+++ A F +
Sbjct: 195 ERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGK 254
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQI-HAHVVKMNMESDVSIQNSLVSLYSKCG 380
M D + +S A + + ++ + +V+ + D I+N G
Sbjct: 255 MPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKN---------G 305
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+ A +F + +N+V++++MI G+A+NG +AL LF + K++ + P++ L ++S
Sbjct: 306 DTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIIS 365
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEH------YACMVDILGRAGSLAEAIDL 490
AC+ +G+++ + +++ + GP + ++D+ + GS+ +A+ +
Sbjct: 366 ACSQLGIID-------AAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQM 414
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 225/504 (44%), Gaps = 102/504 (20%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M ++ S+N MI+ NN+ + A + F MP RN VS+ +MI G+V+ G EA+ L
Sbjct: 162 MCEKDIVSWNMMISGYGNND-RVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVL 220
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ +MP +D N ++SGY+ +G C A IF M D +W M+ G+CK G +
Sbjct: 221 FDSMPV--KDLASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELES 278
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A++ FD+MP KNV++W M+DGY+K LF M N +T + + G
Sbjct: 279 AKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMK----NLVTWSTMI---GG 331
Query: 181 FFRYREGVQVHGLVSRF-----GFDYDIILGNSIITMYGRLGFMDEANKVF------SMM 229
+ R + ++ L RF D ILG II+ +LG +D A + S++
Sbjct: 332 YARNGQPLKALELFERFKEQDIKPDETFILG--IISACSQLGIIDAAESIIHNYVGPSLL 389
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
S D + SLI Y G IE+A ++FE KD + ++TMI ++ G +I LF+
Sbjct: 390 S--DLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFD 447
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+M R +++P+ +T VL+A +++
Sbjct: 448 -------------------------------KMQRANIKPDSVTFLGVLTACNHGGLVDE 476
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G + M + IQ S E++ Y ++ +
Sbjct: 477 GRKYFKQ-----MTEEFGIQPS----------------------EKH---YACVVDLLGR 506
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN---HVGLVEEGFIYFKSMKTLYNIEP 466
G EEA NL R M + P+ + + ++L+AC +V L E + L+ IEP
Sbjct: 507 VGCLEEAYNLIRNMP---IAPHSVVWGALLAACRVHCNVQLAE------VAAAELFKIEP 557
Query: 467 -GPEHYACMVDIL---GRAGSLAE 486
+Y + +I GR GS+A+
Sbjct: 558 DNSGNYILLSNIYAAAGRWGSVAK 581
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/496 (35%), Positives = 284/496 (57%), Gaps = 32/496 (6%)
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
R+ AR++FDK+P+ N W AM GY++ D LF + R N T ++ +
Sbjct: 59 RIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIK 118
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM------- 229
+CG+ REG +VH ++ GF + + S+I MY + G +++A KVF M
Sbjct: 119 SCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVV 178
Query: 230 ------------------------SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
+RD V W+ LISGY+ + + A LF++MP +D
Sbjct: 179 WTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDT 238
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML-R 324
+SW M+ G++ G +E ++F+ MPE++ +W +I G+V N + E F ML
Sbjct: 239 MSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVE 298
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
V PN TL +VLSA + L+ G +H + + + ++ + N L+ +Y+KCG + +
Sbjct: 299 GHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIEN 358
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A +F +D ++I+S+N++I+G A +G +AL +F +MK EG P+ +TF+ +LSAC H
Sbjct: 359 AVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTH 418
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
+GLV++GF+YFKSM Y+I P EHY CMVD+LGRAG L +A++ I M EP +W
Sbjct: 419 MGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWA 478
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
ALLGA R + N+++A+LA Q L+ELEP++ +V++S++Y +G+ D R+++ +
Sbjct: 479 ALLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTG 538
Query: 565 IRKSPGCSWIILKDKV 580
RK PGCS I D V
Sbjct: 539 FRKLPGCSVIECNDSV 554
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 184/411 (44%), Gaps = 37/411 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+ +A+++F M RN V + A+I G++ G L+ P R D V + LISGY+
Sbjct: 161 VEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPER--DVVMWSVLISGYI 218
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ A +F+ M +D ++W +M++GY G V ++FD+MPE+NV +W ++ G
Sbjct: 219 ESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGG 278
Query: 143 YMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
Y+K F + + F M G + N TL + AC R G VH G+
Sbjct: 279 YVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKG 338
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++ +GN +I MY + G ++ A VF+ + ++D +SWN++I+G +G +A +F+RM
Sbjct: 339 NLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRM- 397
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
S+G E D VT+ I+S + ++ F +F
Sbjct: 398 --------------KSEGE------------EPDGVTFVGILSACTHMGLVKDGFLYFKS 431
Query: 322 ML-RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS---LYS 377
M+ + P ++ L+Q + KM +E D I +L+ LY
Sbjct: 432 MVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNF---IRKMPIEPDAVIWAALLGACRLYK 488
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
A + ++ N ++ + + + G E+ L M+D G
Sbjct: 489 NVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGF 539
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 132/549 (24%), Positives = 215/549 (39%), Gaps = 130/549 (23%)
Query: 5 TSASYNAMITALINN-----NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
+A++NAM + N ++ A MP N ++ +I + E EE
Sbjct: 74 NTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMP--NCFTFPMIIKSCGKLEGVREGEE 131
Query: 60 LYVNMPARW--RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
++ +S + +LI Y K G E+A ++F M E++VV W ++++GY G
Sbjct: 132 VHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGD 191
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFE 176
V+ R +FD PE++VV W+ ++ GY++ +LF M R M++N++
Sbjct: 192 VVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAML------ 245
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
G V+G V F KVF M +R+ S
Sbjct: 246 ---------NGYAVNGEVEMF-------------------------EKVFDEMPERNVFS 271
Query: 237 WNSLISGYVHNGEIEEAYRLFERM-------PGK----------------DFVSWT---- 269
WN LI GYV NG E F+RM P D W
Sbjct: 272 WNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYA 331
Query: 270 -------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
+I ++ G +E ++ +FN + KD ++W II+G + +A
Sbjct: 332 ESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDAL 391
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
F M + P+ +T +LSA + G LY
Sbjct: 392 GMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDG-----------------------FLY 428
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
K ++VD Y I I+ Y M+ + GL ++ALN RKM E P+ + +
Sbjct: 429 FK--SMVDHYSIVPQIEH-----YGCMVDLLGRAGLLDQALNFIRKMPIE---PDAVIWA 478
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GPEHYACMVDI---LGRAGSLAEAIDLIN 492
++L AC VE I +++ L +EP P ++ + +I LGR+ +A +
Sbjct: 479 ALLGACRLYKNVE---IAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMR 535
Query: 493 SMTFEPPPG 501
F PG
Sbjct: 536 DTGFRKLPG 544
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 160/365 (43%), Gaps = 60/365 (16%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L +C + R Q+ + G +++ + + IT R + A K+F + + +
Sbjct: 18 LLRSCKNYERLH---QIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPN 74
Query: 234 AVSWNSLISGYVHNGEIEEAYRLF---ERMPG---------------------------- 262
+WN++ GY+ NG + LF R+ G
Sbjct: 75 TATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHC 134
Query: 263 ---------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
FV+ T++I +S KG +E + ++F M E++ V WTAII+G++
Sbjct: 135 CATKHGFKSNSFVA-TSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVV 193
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
R F +DV + +S + + A ++ D N+++
Sbjct: 194 SGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMP--------NRDTMSWNAML 245
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG-LVPNQ 432
+ Y+ G V ++F + ERN+ S+N +I G+ +NGL E L F++M EG ++PN
Sbjct: 246 NGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPND 305
Query: 433 ITFLSVLSACNHVGLVEEG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
T ++VLSAC+ +G ++ G +Y +S+ N+ G ++D+ + G + A+
Sbjct: 306 FTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVG----NVLIDMYAKCGVIENAVV 361
Query: 490 LINSM 494
+ N +
Sbjct: 362 VFNCL 366
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
QI A +V +E + + + ++ S+ + A ++F I + N ++N+M G+ QNG
Sbjct: 30 QIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNG 89
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
+ + LF ++ +PN TF ++ +C + V EG T + +
Sbjct: 90 HHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGE-EVHCCATKHGFKSNSFVA 148
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
++D+ + G + +A + M E VW A++
Sbjct: 149 TSLIDMYSKKGCVEDAYKVFGEM-HERNVVVWTAII 183
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/490 (37%), Positives = 292/490 (59%), Gaps = 12/490 (2%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-----NSITLTILF 175
A ++F +P NV W ++ G C E+ LF ++ G N T LF
Sbjct: 86 ALKVFSSIPNPNVFIWNIVIKG-----CLENN-KLFKAIYFYGRMVIDARPNKFTYPTLF 139
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+AC +EG Q+HG V + G D+ + ++ I MY G +++A K+F + D V
Sbjct: 140 KACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF-YSGESDVV 198
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
WN++I GY+ G +E A LF +MP K+ SW MI G + GNL + +LF+ M E+D
Sbjct: 199 CWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERD 258
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
+++W++++ G+++ +Y+EA F +M R++ RP + LSSVL+A + ++QG +HA
Sbjct: 259 EISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHA 318
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
++ + +++ D + +L+ +Y+KCG + + +F + ER I ++N+MI G A +G E+
Sbjct: 319 YLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAED 378
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
AL LF K+++ + PN IT + VL+AC H G V++G F++M+ Y ++P EHY CMV
Sbjct: 379 ALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMV 438
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D+LGR+G +EA DLINSM +P VWGALLGA R H N DLA+ + L+ELEP ++
Sbjct: 439 DLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSG 498
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
YV+LS++Y+ +G+ D +++R K + I+ PG S + L VH F G S +KE
Sbjct: 499 RYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKE 558
Query: 596 IEVTLQTISK 605
I L+ I +
Sbjct: 559 IYRKLKIIKE 568
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 182/393 (46%), Gaps = 34/393 (8%)
Query: 51 RGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
R MFY E D VC N +I GYLK G E A +F M K++ +W M++
Sbjct: 187 RKMFYSGES----------DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMIN 236
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
G K G + +AR++FD+M E++ ++W++MVDGY+ +++ ++F M+R
Sbjct: 237 GLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFI 296
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L+ + AC +G VH + R D +LG +++ MY + G +D +VF M
Sbjct: 297 LSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK 356
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIE 286
+R+ +WN++I G +G E+A LF ++ + ++ ++T + G ++K +
Sbjct: 357 EREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLR 416
Query: 287 LFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+F M E V + ++ + + EA M ++PN ++L A
Sbjct: 417 IFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM---PMKPNAAVWGALLGAC 473
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRIFTNIDER----- 395
+ ++ + + +E S + L+S +Y+K G D +I + R
Sbjct: 474 RIHGNFDLAERVGK--ILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTV 531
Query: 396 ---NIVSYNSMISGFAQ-NGLGEEALNLFRKMK 424
+IV N + F +G + ++RK+K
Sbjct: 532 PGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLK 564
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 46/290 (15%)
Query: 9 YNAMITALINNNCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
+N MI + C + EA + +FA MP++N S+ MI G + G +A +L+ M
Sbjct: 200 WNTMIDGYLK--CGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSE- 256
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAM------------------------------ 97
RD + ++++ GY+ GR +EA IF+ M
Sbjct: 257 -RDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRW 315
Query: 98 ---------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
++ D V +++D Y K GR+ E+F++M E+ + W AM+ G
Sbjct: 316 VHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGR 375
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF-GFDYDIILGN 207
ED +LF ++ G M N ITL + AC +G+++ + F G D ++
Sbjct: 376 AEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYG 435
Query: 208 SIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
++ + GR G EA + SM K +A W +L+ +G + A R+
Sbjct: 436 CMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERV 485
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 187/502 (37%), Positives = 287/502 (57%), Gaps = 40/502 (7%)
Query: 97 MVEKDVVAWGSMVDGYCKK-GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
M K V W S++ G KK G++ EA+E+F K+PE + V++ M+ Y++
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNS-------- 52
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
+M R F + + D N++IT + +
Sbjct: 53 --NMERAQAFFEDMPIK-----------------------------DTPSWNTMITGFAQ 81
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGF 275
MD+A +F +M ++ V+WN++ISGYV G+++ A +LFE+ P K V+WT MITG+
Sbjct: 82 NQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGY 141
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
G + + LF MPEK+ VTW A+I+G++ N + E+ + F M+ ++PN TLS
Sbjct: 142 MKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLS 201
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S L + + L G Q+H V K + D + SL+S+Y KCG + D +++F + R
Sbjct: 202 SALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRR 261
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
++V++N+MISG+AQ+G G++AL LF +M ++G+ P+ ITF++VL ACNH G + G YF
Sbjct: 262 DVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYF 321
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
SM Y + P+HY CMVD+LGRAG L EA+DLI M F+P V+G LLGA R H N
Sbjct: 322 HSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKN 381
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
++A+ A+Q L+ L+P SAT YV L+++Y+ + RVR K ++ K+PG SWI
Sbjct: 382 TEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIE 441
Query: 576 LKDKVHLFLAGRKSCLDLKEIE 597
+K H F +G K +L I
Sbjct: 442 VKSMAHQFRSGDKFHPELASIH 463
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 167/290 (57%), Gaps = 7/290 (2%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
+ SYN M++ + N+ ++ A F MP+++ S+ MITGF + +A +L++ MP
Sbjct: 38 AVSYNTMLSCYVRNS-NMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMP 96
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
+ + V NA+ISGY++ G + A ++FE K VVAW +M+ GY K GR+ A +F
Sbjct: 97 TK--NVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLF 154
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+KMPEKN+V W AM+ GY++ EDG LF +M G+ NS TL+ C +
Sbjct: 155 EKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQ 214
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G QVH LV + D G S+I+MY + G +++ K+F + +RD V+WN++ISGY
Sbjct: 215 LGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYA 274
Query: 246 HNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
+GE ++A LF+ M K D++++ ++ + G + ++ F+ M
Sbjct: 275 QHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSM 324
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 15/145 (10%)
Query: 1 MADRTSASYNAMITALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA 57
+ D T+A T+LI+ C + + +++F +P R+ V++ AMI+G+ + G +A
Sbjct: 228 LCDDTTAG-----TSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKA 282
Query: 58 EELYVNMPARW--RDSVCSNALISGYLKVGRCEEAARIFEAMVEK-DVVA----WGSMVD 110
L+ M + D + A++ G + + F +M + +VA + MVD
Sbjct: 283 LGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVD 342
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVA 135
+ G+++EA ++ +KMP K A
Sbjct: 343 LLGRAGKLVEAVDLIEKMPFKPHAA 367
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 182/490 (37%), Positives = 292/490 (59%), Gaps = 12/490 (2%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-----NSITLTILF 175
A ++F +P NV W ++ G C E+ LF ++ G N T LF
Sbjct: 86 ALKVFSSIPNPNVFIWNIVIKG-----CLENN-KLFKAIYFYGRMVIDARPNKFTYPTLF 139
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+AC +EG Q+HG V + G D+ + ++ I MY G +++A K+F + D V
Sbjct: 140 KACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF-YSGESDVV 198
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
WN++I GY+ G +E A LF +MP K+ SW MI G + GNL + +LF+ M E+D
Sbjct: 199 CWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERD 258
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
+++W++++ G+++ +Y+EA F +M R++ RP + LSSVL+A + ++QG +HA
Sbjct: 259 EISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHA 318
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
++ + +++ D + +L+ +Y+KCG + + +F + ER I ++N+MI G A +G E+
Sbjct: 319 YLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAED 378
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
AL LF K+++ + PN IT + VL+AC H G V++G F++M+ Y ++P EHY CMV
Sbjct: 379 ALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMV 438
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D+LGR+G +EA DLINSM +P VWGALLGA R H N DLA+ + L+ELEP ++
Sbjct: 439 DLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSG 498
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
YV+LS++Y+ +G+ D +++R K + I+ PG S + L VH F G S +KE
Sbjct: 499 RYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKE 558
Query: 596 IEVTLQTISK 605
I L+ I +
Sbjct: 559 IYRKLKIIKE 568
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 183/393 (46%), Gaps = 34/393 (8%)
Query: 51 RGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
R MFY E D VC N +I GYLK G E A +F M K++ +W M++
Sbjct: 187 RKMFYSGES----------DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMIN 236
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
G K G + +AR++FD+M E++ ++W++MVDGY+ +++ ++F M+R
Sbjct: 237 GLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFI 296
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L+ + AC +G VH + R D +LG +++ MY + G +D +VF M
Sbjct: 297 LSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK 356
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIE 286
+R+ +WN++I G +G E+A LF ++ + ++ ++T + G ++K +
Sbjct: 357 EREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLR 416
Query: 287 LFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+F M E V + ++ + + EA M ++PN ++L A
Sbjct: 417 IFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM---PMKPNAAVWGALLGAC 473
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRIFTNIDER----- 395
+ ++ + + +E S + L+S +Y+K G D +I + +R
Sbjct: 474 RIHGNFDLAERVGK--ILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTV 531
Query: 396 ---NIVSYNSMISGFAQ-NGLGEEALNLFRKMK 424
+IV N + F +G + ++RK+K
Sbjct: 532 PGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLK 564
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 46/290 (15%)
Query: 9 YNAMITALINNNCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
+N MI + C + EA + +FA MP++N S+ MI G + G +A +L+ M
Sbjct: 200 WNTMIDGYLK--CGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSE- 256
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAM------------------------------ 97
RD + ++++ GY+ GR +EA IF+ M
Sbjct: 257 -RDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRW 315
Query: 98 ---------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
++ D V +++D Y K GR+ E+F++M E+ + W AM+ G
Sbjct: 316 VHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGR 375
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF-GFDYDIILGN 207
ED +LF ++ G M N ITL + AC +G+++ + F G D ++
Sbjct: 376 AEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYG 435
Query: 208 SIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
++ + GR G EA + SM K +A W +L+ +G + A R+
Sbjct: 436 CMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERV 485
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 217/627 (34%), Positives = 344/627 (54%), Gaps = 73/627 (11%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNA-----LIS 79
+A IF M +RN VS ++ G V++ A +++ M +D V N+ L+S
Sbjct: 335 DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM----KDLVGINSDSYVVLLS 390
Query: 80 GYLKVGRCEEA--------ARIFEAMVEKDVVAWGS-MVDGYCKKGRVIEAREIFDKMPE 130
+ + EE A + + + VA G+ +V+ Y K G + +A +F+ M E
Sbjct: 391 AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVE 450
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K+ V+W +++ G + +C ED + F MRR G ++ TL +C G Q+
Sbjct: 451 KDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQI 510
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE- 249
H + G D D+ + N+++ +Y G E KVFS+M + D VSWNS+I G + + E
Sbjct: 511 HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVI-GALSDSEA 569
Query: 250 -IEEAYRLFERMP----GKDFVSWTTMITGFSS--------------------------- 277
+ +A + F +M G V++ +++ SS
Sbjct: 570 SVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGN 629
Query: 278 --------KGNLEKSIELFNMMPE-KDDVTWTAIISGFVNNEQYEEAFR--WFIEMLRKD 326
G + + ++F M E +D+V+W ++ISG+++NE +A WF M++K
Sbjct: 630 ALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWF--MMQKG 687
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
R + T +++LSA A+ ATL +G ++HA ++ +ESDV + ++LV +YSKCG + A
Sbjct: 688 QRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYAS 747
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
R F + RN+ S+NSMISG+A++G GE+AL LF +M +G P+ +TF+ VLSAC+HVG
Sbjct: 748 RFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVG 807
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
VEEGF +FKSM +Y + P EH++CMVD+LGRAG L E D INSM +P +W +
Sbjct: 808 FVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTV 867
Query: 507 LGA-----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
LGA GR N +L + AA+ L+ELEP +A YV+L+++Y+ K D + R K
Sbjct: 868 LGACCRANGR---NTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMK 924
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRK 588
++K GCSW+ +KD VH+F+AG K
Sbjct: 925 EAAVKKEAGCSWVTMKDGVHVFVAGDK 951
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 236/488 (48%), Gaps = 59/488 (12%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-SVCSNALISG 80
S +A +F + +RN++S+ ++I+ + RRG A +L+ +M S N G
Sbjct: 225 SANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFG 284
Query: 81 YLKVGRCEEA-----------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
L C AR+ ++ +D+ ++V G+ + G +A+ IF++M
Sbjct: 285 SLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMG 344
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY----R 185
+NVV+ ++ G +K E +F M + + NS + +L A F R
Sbjct: 345 VRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRR 403
Query: 186 EGVQVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
+G +VH V R G D + +GN ++ MY + G + +A VF +M ++D+VSWNSLISG
Sbjct: 404 KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 463
Query: 245 VHNGEIEEAYRLFER------MPGK---------------------------------DF 265
N E+A F R MP D
Sbjct: 464 DQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 523
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE-QYEEAFRWFIEMLR 324
++ ++ G + +++F++MPE D V+W ++I ++E +A ++F++M+R
Sbjct: 524 SVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMR 583
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+++T ++LSA ++ + QIHA V+K + D +I N+L+S Y KCG + +
Sbjct: 584 GGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNE 643
Query: 385 AYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+IF + E R+ VS+NSMISG+ N L +A++L M +G + TF ++LSAC
Sbjct: 644 CEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACA 703
Query: 444 HVGLVEEG 451
V +E G
Sbjct: 704 SVATLERG 711
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 221/475 (46%), Gaps = 66/475 (13%)
Query: 31 ATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEA 90
T +++ V + T +F + E + ++ R++ S CS +L+ +
Sbjct: 45 CTKSLQDLVDHYKTSTSHCNTTLF-SSSETFESLINRYQGSCCSEEARELHLQSIKYGFV 103
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+F + ++++ Y + G + A+++FD+M +N+V W ++ GY + +
Sbjct: 104 GNLFLS---------NTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPD 154
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRF--FRYREGVQVHGLVSRFGFDYDIILGNS 208
+ F M R G N AC + GVQ+HGL+S+ + D+++ N
Sbjct: 155 EACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNV 214
Query: 209 IITMYGR-LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----- 262
+I+MYG L ++A VF + R+++SWNS+IS Y G+ AY LF M
Sbjct: 215 LISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGF 274
Query: 263 ----------------------------------------KDFVSWTTMITGFSSKGNLE 282
+D + +++GF+ G +
Sbjct: 275 SFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTD 334
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSAS 341
+ +F M ++ V+ ++ G V +Q E A + F EM KD V N + +LSA
Sbjct: 335 DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM--KDLVGINSDSYVVLLSAF 392
Query: 342 AATATLNQGS----QIHAHVVKMNM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+ + L +G ++HAHV++ + ++ V+I N LV++Y+K G + DA +F + E++
Sbjct: 393 SEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKD 452
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
VS+NS+ISG QN E+A F +M+ G +P+ T +S LS+C +G + G
Sbjct: 453 SVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLG 507
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 171/396 (43%), Gaps = 77/396 (19%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM----PMRNAVSYAAMITGFVRRGMFYE 56
M ++ S S+N++I+ L N CS +A E F M M + + + ++ G
Sbjct: 448 MVEKDSVSWNSLISGLDQNECS-EDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIML 506
Query: 57 AEELYVNMPARWRDS--VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
E+++ + D+ SNAL++ Y + G E ++F M E D V+W S++
Sbjct: 507 GEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIG---- 562
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
A+ D V FL M RGG + +T +
Sbjct: 563 -----------------------ALSDSEASV---SQAVKYFLQMMRGGWGLSRVTFINI 596
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RD 233
A + Q+H LV ++ D +GN++++ YG+ G M+E K+F+ MS+ RD
Sbjct: 597 LSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 656
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIEL-- 287
VSWNS+ISGY+HN + +A L M K D ++ T+++ +S LE+ +E+
Sbjct: 657 EVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHA 716
Query: 288 ---------------------------------FNMMPEKDDVTWTAIISGFVNNEQYEE 314
F +MP ++ +W ++ISG+ + E+
Sbjct: 717 CGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEK 776
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
A + F M+ P+ +T VLSA + + +G
Sbjct: 777 ALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEG 812
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGF-----VRRGMF 54
R S+N+MI+ I+N +++A ++ M + ++ ++A +++ + RGM
Sbjct: 655 RDEVSWNSMISGYIHNEL-LHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGME 713
Query: 55 YEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
A + + + D V +AL+ Y K GR + A+R FE M ++V +W SM+ GY +
Sbjct: 714 VHACGIRACLES---DVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYAR 770
Query: 115 KGRVIEAREIFDKM----PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM 159
G +A ++F +M + V + ++ V E+GF+ F SM
Sbjct: 771 HGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSM 819
>gi|242092520|ref|XP_002436750.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
gi|241914973|gb|EER88117.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
Length = 672
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 206/626 (32%), Positives = 343/626 (54%), Gaps = 36/626 (5%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRR---GMFYEAEEL 60
R+ ++N+ + AL + + A F MPMR+ +S+ ++ + R A L
Sbjct: 65 RSVVTWNSFLAAL-SRRRDVRAARSFFDAMPMRDIISWNTLLAAYARSLQPDHLAAARRL 123
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R D+V + L+ Y + G EEA R+F+ M ++ +W +MV G+ G++ +
Sbjct: 124 FDEMPQR--DAVSWSTLLGAYTRRGLMEEAQRLFDEMPHRNPASWNTMVTGFFAIGQMRK 181
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF------LSMRRGGMAFNSITLTIL 174
A +F+ MP K+ + +AMV G+++ + +L + M + AFN TL
Sbjct: 182 ALNVFEAMPVKDSASLSAMVSGFIRNGWLHEADELLTKRLRAMDMDKAVDAFN--TLIAA 239
Query: 175 FEACGRFFRYREGVQV-------HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ GR R + H R F+ +++ NS++ Y R G + A +F
Sbjct: 240 YGQTGRVTDARRLFSMIPKTQSQHKGHKRRVFERNVVSWNSMMMCYIRTGDVCSARALFD 299
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
M +D V+WN++I+GY ++EEA +LF +P D V+W MI GF+ KG++E +
Sbjct: 300 EMPFKDLVTWNTMIAGYTQASDMEEAEKLFGEVPAPDAVTWNLMIRGFTQKGDVEHARGF 359
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ MPE+ +TW +ISG+ NE Y+ + F ML VL+A A+ A L
Sbjct: 360 FDRMPEQSTITWNTMISGYEQNEDYDCTIKLFQRML-----------EVVLAACASLAML 408
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISG 406
G+Q+H +++ + D + N+L+++YS+CG + A IF+ + ++++VS+N++I G
Sbjct: 409 RLGAQLH-QLIEKSFLPDTATNNALMTMYSRCGELTSAKAIFSQMHTQKDLVSWNALIGG 467
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+ +G EAL LF++M+ ++P ITF+S+LSAC + GLV EG + F +M Y + P
Sbjct: 468 YEHHGNATEALRLFQEMRSAKVMPTHITFISLLSACGNAGLVSEGQVVFHTMVHEYGLAP 527
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL 526
EHYA +V+++GR G L +A+++I SM P VWGA LGA N LA +AA L
Sbjct: 528 RVEHYAALVNLIGRHGQLEDALEVIKSMPIAPDRAVWGAFLGACTAKKNEVLAAVAANAL 587
Query: 527 MELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+++P+S+ PYV++ +L++ G+ + VR + I K PG SWI L DKVH+F++G
Sbjct: 588 SKIDPESSAPYVLMHNLHAHEGRWGSASVVREDMERLGIHKHPGYSWIDLHDKVHVFISG 647
Query: 587 RKSCLDLKEIEVTLQTISKGTKEFDW 612
S +EI L+ + + DW
Sbjct: 648 DTSHPLTQEIFSVLECFYRSCR--DW 671
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 45/260 (17%)
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
R G A ++F + R V+WNS ++ ++ A F+ MP +D +SW T++
Sbjct: 48 RRGRFSAARRLFDALPARSVVTWNSFLAALSRRRDVRAARSFFDAMPMRDIISWNTLLAA 107
Query: 275 FS---SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM--------- 322
++ +L + LF+ MP++D V+W+ ++ + EEA R F EM
Sbjct: 108 YARSLQPDHLAAARRLFDEMPQRDAVSWSTLLGAYTRRGLMEEAQRLFDEMPHRNPASWN 167
Query: 323 -----------LRKDVR-------PNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNME 363
+RK + + +LS+++S L++ ++ ++ M+M+
Sbjct: 168 TMVTGFFAIGQMRKALNVFEAMPVKDSASLSAMVSGFIRNGWLHEADELLTKRLRAMDMD 227
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNID--------------ERNIVSYNSMISGFAQ 409
V N+L++ Y + G V DA R+F+ I ERN+VS+NSM+ + +
Sbjct: 228 KAVDAFNTLIAAYGQTGRVTDARRLFSMIPKTQSQHKGHKRRVFERNVVSWNSMMMCYIR 287
Query: 410 NGLGEEALNLFRKMKDEGLV 429
G A LF +M + LV
Sbjct: 288 TGDVCSARALFDEMPFKDLV 307
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N + G + G A RLF+ +P + V+W + + S + ++ + F+ MP +D +
Sbjct: 40 NRSLMGLLRRGRFSAARRLFDALPARSVVTWNSFLAALSRRRDVRAARSFFDAMPMRDII 99
Query: 298 TWTAIISGFVNNEQYEE---AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
+W +++ + + Q + A R F EM ++D ++ S++L A + + ++
Sbjct: 100 SWNTLLAAYARSLQPDHLAAARRLFDEMPQRDA----VSWSTLLGAYTRRGLMEEAQRLF 155
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+ N S N++V+ + G + A +F + ++ S ++M+SGF +NG
Sbjct: 156 DEMPHRNPAS----WNTMVTGFFAIGQMRKALNVFEAMPVKDSASLSAMVSGFIRNGWLH 211
Query: 415 EALNLFRK 422
EA L K
Sbjct: 212 EADELLTK 219
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 214/638 (33%), Positives = 334/638 (52%), Gaps = 56/638 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
SI +A +F M R+ S+ MI G + G EA L++ M R N ++ Y
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQME---RGGCLPN--LTTY 235
Query: 82 LKV---------GRCEEAARIFE----AMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
L + G E + + A D+ +++ Y K G + +AR +FD M
Sbjct: 236 LSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM 295
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+++V++W AM+ G + C + F +FL M++ G +S T L +
Sbjct: 296 CDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVK 355
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+VH G D+ +G++ + MY R G +D+A +F ++ R+ +WN++I G
Sbjct: 356 EVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQK 415
Query: 249 EIEEAYRLFERMP-------------------GKDFVSWT-------------------T 270
EA LF +M G++ + W
Sbjct: 416 CGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNA 475
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
++ ++ GN + ++F+ M E++ TWT +ISG + EAF F++MLR+ + P+
Sbjct: 476 LVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPD 535
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T S+LSA A+T L ++H+H V + SD+ + N+LV +Y+KCG+V DA R+F
Sbjct: 536 ATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFD 595
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
++ ER++ S+ MI G AQ+G G +AL+LF KMK EG PN +F++VLSAC+H GLV+E
Sbjct: 596 DMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDE 655
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G F S+ Y IEP EHY CMVD+LGRAG L EA I +M EP WGALLGA
Sbjct: 656 GRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGAC 715
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
T+ NL++A+ AA+ ++L+P SA+ YV+LS++Y+ G VR + + IRK PG
Sbjct: 716 VTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPG 775
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
SWI + +++H F+ G S + KEI L+ + K K
Sbjct: 776 RSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLK 813
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 232/517 (44%), Gaps = 113/517 (21%)
Query: 14 TALINN--NC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------ 64
TAL+N C SI +A IF M RN +S+ MI G G EA ++ M
Sbjct: 69 TALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFI 128
Query: 65 -----------------PARWRDSVCS--------------NALISGYLKVGRCEEAARI 93
W V S NAL+ Y K G ++A +
Sbjct: 129 PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV 188
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
F+ MVE+D+ +W M+ G + GR EA F
Sbjct: 189 FDGMVERDIFSWTVMIGGLAQHGRGQEA-------------------------------F 217
Query: 154 DLFLSMRRGGMAFNSIT-LTILFEACGRFFRYREGV-QVHGLVSRFGFDYDIILGNSIIT 211
LFL M RGG N T L+IL + E V +VH + GF D+ +GN++I
Sbjct: 218 SLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIH 277
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV----- 266
MY + G +D+A VF M RD +SWN++I G NG EA+ +F +M + FV
Sbjct: 278 MYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTT 337
Query: 267 ------------SW----------------------TTMITGFSSKGNLEKSIELFNMMP 292
+W + + + G+++ + +F+ +
Sbjct: 338 YLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLA 397
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
++ TW A+I G + EA F++M R+ P+ T ++LSA+ L +
Sbjct: 398 VRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKE 457
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H++ + + D+ + N+LV +Y+KCGN + A ++F ++ ERN+ ++ MISG AQ+G
Sbjct: 458 VHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGC 516
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
G EA +LF +M EG+VP+ T++S+LSAC G +E
Sbjct: 517 GHEAFSLFLQMLREGIVPDATTYVSILSACASTGALE 553
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 208/418 (49%), Gaps = 46/418 (11%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A I ++ + DV ++V+ Y K G + +A+ IFDKM E+NV++WT M+ G +
Sbjct: 54 AHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQ 113
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ F FL M+R G NS T + A +VH G D+ +GN+++
Sbjct: 114 EAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALV 173
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM---------- 260
MY + G +D+A VF M +RD SW +I G +G +EA+ LF +M
Sbjct: 174 HMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLT 233
Query: 261 --------------------------PGK-----DFVSWTTMITGFSSKGNLEKSIELFN 289
GK D +I ++ G+++ + +F+
Sbjct: 234 TYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFD 293
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
M ++D ++W A+I G N EAF F++M ++ P+ T S+L+ +T
Sbjct: 294 GMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEW 353
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
++H H V++ + SD+ + ++ V +Y +CG++ DA IF + RN+ ++N+MI G AQ
Sbjct: 354 VKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQ 413
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
G EAL+LF +M+ EG P+ TF+++LSA +VG EE + K + + Y I+ G
Sbjct: 414 QKCGREALSLFLQMRREGFFPDATTFVNILSA--NVG--EEALEWVKEVHS-YAIDAG 466
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 180/343 (52%), Gaps = 41/343 (11%)
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY + ED ++ MRR G N IT + +AC + G ++H + + G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
F D+ + +++ MY + G +D+A +F M +R+ +SW +I G H G +EA+ F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 259 RMPGKDFV----SWTTMITGFSSKGNLE-------------------------------K 283
+M + F+ ++ +++ +S G LE
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 284 SIE----LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
SI+ +F+ M E+D +WT +I G + + +EAF F++M R PN T S+L+
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 340 ASAATAT--LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
ASA T+T L ++H H K SD+ + N+L+ +Y+KCG++ DA +F + +R++
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+S+N+MI G AQNG G EA +F KM+ EG VP+ T+LS+L+
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLN 343
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 136/241 (56%), Gaps = 8/241 (3%)
Query: 209 IITMYGRLGFMDEANKVFSMMSKR----DAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
+I Y G+ ++A KV+S M + + +++ S++ ++ ++ +
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 265 FVS----WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
F S T ++ + G+++ + +F+ M E++ ++WT +I G + + +EAF F+
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+M R+ PN T S+L+A+A+ L ++H+H V + D+ + N+LV +Y+K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
++ DA +F + ER+I S+ MI G AQ+G G+EA +LF +M+ G +PN T+LS+L+
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 441 A 441
A
Sbjct: 241 A 241
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 94/148 (63%)
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+I G+ E+A + + +M R+ +PN++T S+L A + +L G +IHAH+++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+SDV ++ +LV++Y KCG++ DA IF + ERN++S+ MI G A G G+EA + F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVE 449
+M+ EG +PN T++S+L+A G +E
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALE 148
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 210/633 (33%), Positives = 343/633 (54%), Gaps = 47/633 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSN 75
SI EA E+F M ++ VS+ I G+ G A E++ M P R N
Sbjct: 176 SIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLN 235
Query: 76 ALIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
A S LK G+ + RI A E D ++V Y K G + R++F+K+ ++++
Sbjct: 236 AFSSPAALKWGKAVHS-RILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLI 294
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
AW M+ G + +E+ +++ M+R G+ N IT IL AC G ++H V
Sbjct: 295 AWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRV 354
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
++ GF DI + N++I+MY R G + +A VF M ++D +SW ++I G +G EA
Sbjct: 355 AKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEAL 414
Query: 255 RLFERMPGK----DFVSWTTMITGFSSK-------------------------------- 278
+++ M + V++T+++ SS
Sbjct: 415 TVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMY 474
Query: 279 ---GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
G+++ + ++F+ M ++D V + A+I G+ + +EA + F + + ++P+++T
Sbjct: 475 SMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYI 534
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
++L+A A + +L +IH V K SD S+ N+LVS Y+KCG+ DA +F + +R
Sbjct: 535 NMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKR 594
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
N++S+N++I G AQ+G G++AL LF +MK EG+ P+ +TF+S+LSAC+H GL+EEG YF
Sbjct: 595 NVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYF 654
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
SM + I P EHY CMVD+LGRAG L EA LI +M F+ +WGALLGA R H N
Sbjct: 655 CSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGN 714
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+ +A+ AA+ ++L+ D+A YV LS +Y+ G ++R + + + K PG SWI
Sbjct: 715 VPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQ 774
Query: 576 LKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+ DK+H F+A +S ++I L ++ K
Sbjct: 775 VGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMK 807
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 175/603 (29%), Positives = 297/603 (49%), Gaps = 65/603 (10%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPM--RNAVSYAAMITGFVRRGMFYEAEELYVNM- 64
+ NA+I I SI EA +++ + R S+ AM+ G+++ G +A +L M
Sbjct: 60 TVNALINMYIQCG-SIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQ 118
Query: 65 -----PARWRD-SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
P R S S+ G L+ GR E + +A + DV +++ Y K G +
Sbjct: 119 QHGLAPDRTTIMSFLSSCKSPGALEWGR-EIHFQAMQAGLLFDVKVANCILNMYAKCGSI 177
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EARE+FDKM +K+VV+WT + GY E F++F M + G+ N IT + A
Sbjct: 178 EEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAF 237
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ G VH + G + D +G +++ MY + G + +VF + RD ++WN
Sbjct: 238 SSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWN 297
Query: 239 SLISGYVHNGEIEEAYRLFER------MPGK----------------------------- 263
++I G G EEA ++ + MP K
Sbjct: 298 TMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKA 357
Query: 264 ----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
D +I+ +S G+++ + +F+ M KD ++WTA+I G + EA +
Sbjct: 358 GFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVY 417
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
EM + V PN++T +S+L+A ++ A L G +IH VV+ + +D + N+LV++YS C
Sbjct: 418 QEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMC 477
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G+V DA ++F + +R+IV+YN+MI G+A + LG+EAL LF ++++EGL P+++T++++L
Sbjct: 478 GSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINML 537
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPG-----PEHYACMVDILGRAGSLAEAIDLINSM 494
+AC + G +E + + + TL + G +V + GS ++A + M
Sbjct: 538 NACANSGSLE----WAREIHTL--VRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKM 591
Query: 495 TFEPPPGVWGALLGAGRTH-LNLDLAKLAAQHLME-LEPDSATPYVVLSDLYSVIGKKRD 552
T W A++G H D +L + ME ++PD T +V L S G +
Sbjct: 592 TKRNVIS-WNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVT-FVSLLSACSHAGLLEE 649
Query: 553 GNR 555
G R
Sbjct: 650 GRR 652
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 206/423 (48%), Gaps = 72/423 (17%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAM--VEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
D NALI+ Y++ G EEA ++++ + +E+ V +W +MV GY + G +
Sbjct: 57 DQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYI--------- 107
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
E L M++ G+A + T+ +C G
Sbjct: 108 ----------------------EKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWG 145
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++H + G +D+ + N I+ MY + G ++EA +VF M K+ VSW I GY
Sbjct: 146 REIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADC 205
Query: 248 GEIEEAYRLFERMPGKDFV----SWTTMITGFSSK------------------------- 278
G E A+ +F++M + V ++ +++ FSS
Sbjct: 206 GRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVG 265
Query: 279 ----------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
G+ + ++F + +D + W +I G +EEA + +M R+ V
Sbjct: 266 TALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVM 325
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN++T +L+A +A L+ G +IH+ V K SD+ +QN+L+S+YS+CG++ DA +
Sbjct: 326 PNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLV 385
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + ++++S+ +MI G A++G G EAL ++++M+ G+ PN++T+ S+L+AC+ +
Sbjct: 386 FDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAAL 445
Query: 449 EEG 451
E G
Sbjct: 446 EWG 448
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 200/403 (49%), Gaps = 46/403 (11%)
Query: 150 EDG-FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
+DG D+ +++ G NS + + C G QVH + + D N+
Sbjct: 4 KDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA 63
Query: 209 IITMYGRLGFMDEANKVFSMMS--KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
+I MY + G ++EA +V+ +S +R SWN+++ GY+ G IE+A +L +M
Sbjct: 64 LINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLA 123
Query: 267 SWTTMITGFSSK---------------------------------------GNLEKSIEL 287
T I F S G++E++ E+
Sbjct: 124 PDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREV 183
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ M +K V+WT I G+ + + E AF F +M ++ V PN++T SVL+A ++ A L
Sbjct: 184 FDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAAL 243
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
G +H+ ++ ESD ++ +LV +Y+KCG+ D ++F + R+++++N+MI G
Sbjct: 244 KWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 303
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC-NHVGLVEEGFIYFKSMKTLYNIEP 466
A+ G EEA ++ +M+ EG++PN+IT++ +L+AC N L I+ + K + +
Sbjct: 304 AEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDI 363
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G ++ ++ + R GS+ +A + + M + W A++G
Sbjct: 364 GVQN--ALISMYSRCGSIKDARLVFDKMVRKDVIS-WTAMIGG 403
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 195/540 (36%), Positives = 305/540 (56%), Gaps = 40/540 (7%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK-KGRVIEAREIFDKM 128
D V N I+ +++ E A +FE M + V W +M+ GY K G+V EA E+FDK+
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
PE + V++ M+ Y++ G L+ FN + +
Sbjct: 132 PEPDSVSYNIMLVCYLR----SYGVKAALAF------FNKMPVK---------------- 165
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
DI N++I+ + + G M +A +FS+M +++ VSW+++ISGYV +G
Sbjct: 166 -------------DIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHG 212
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
++E A L++ + K V T M+TG+ G +E + +F M K+ VTW ++I+G+V
Sbjct: 213 DLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVE 272
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
N + E+ + F M+ VRPN L+LSSVL + + L G Q+H V K + D +
Sbjct: 273 NCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTA 332
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
SL+S+Y KCG++ A+++F + ++++++N+MISG+AQ+G G +AL+LF KM++ +
Sbjct: 333 CTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTM 392
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
P+ ITF++V+ ACNH G V+ G YFKSMK + IE P HY C++D+LGRAG L EA+
Sbjct: 393 KPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAV 452
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
LI M F P ++G LLGA R H NLDLA+ AA++L+ L+P SAT YV L+++Y+
Sbjct: 453 SLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATN 512
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K +VR K + K PG SWI +K H F + + +L I L + K
Sbjct: 513 KWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMK 572
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 168/326 (51%), Gaps = 12/326 (3%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
S SYN M+ + + + A F MP+++ S+ +I+GF + G +A +L+ MP
Sbjct: 136 SVSYNIMLVCYLRSY-GVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP 194
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
+ + V +A+ISGY++ G E A +++ + K VV +M+ GY K G+V A IF
Sbjct: 195 EK--NGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIF 252
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+M KN+V W +M+ GY++ EDG +F +M + N ++L+ + C
Sbjct: 253 QRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALP 312
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G Q+H LVS+ D S+I+MY + G +D A K+F M ++D ++WN++ISGY
Sbjct: 313 LGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYA 372
Query: 246 HNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDD 296
+G +A LF++M D++++ +I + G ++ ++ F M E
Sbjct: 373 QHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKP 432
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEM 322
V +T +I + +EA EM
Sbjct: 433 VHYTCVIDLLGRAGRLDEAVSLIKEM 458
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 214/500 (42%), Gaps = 120/500 (24%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVR-RGMFYEAEELYVNMPA 66
S N I + + C + A +F M +R V++ M++G+ + G EA EL+ +P
Sbjct: 75 SLNKTIASFVRA-CDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPE 133
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
DSV N ++ YL+ + A F M KD+ +W +++ G+ + G++ +A ++F
Sbjct: 134 P--DSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
MPEKN V+W+AM+ GY++ E +L+ + GM
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELY---KNVGMK--------------------- 227
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
+++ +++T Y + G ++ A ++F M+ ++ V+WNS+I+GYV
Sbjct: 228 ---------------SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVE 272
Query: 247 NGEIEEAYRLFERM------P---------------------------------GKDFVS 267
N E+ ++F+ M P KD +
Sbjct: 273 NCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTA 332
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T++I+ + G+L+ + +LF MP KD +TW A+ISG+ + +A F +M +
Sbjct: 333 CTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTM 392
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ +T +V+ A ++ G Q +M+ + I
Sbjct: 393 KPDWITFVAVILACNHAGFVDLGVQYFK-----SMKKEFGI------------------- 428
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-HVG 446
E V Y +I + G +EA++L ++M P+ + ++L AC H
Sbjct: 429 ------EAKPVHYTCVIDLLGRAGRLDEAVSLIKEMP---FTPHAAIYGTLLGACRIHKN 479
Query: 447 LVEEGFIYFKSMKTLYNIEP 466
L F + + L N++P
Sbjct: 480 LDLAEF----AARNLLNLDP 495
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/568 (32%), Positives = 316/568 (55%), Gaps = 38/568 (6%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYL 82
A E+F +MP R+ VS+ M++ + G EA + V+M R DS + ++
Sbjct: 246 HALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACA 305
Query: 83 KVGRC----EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
K+ + A++ ++ D +MV+ Y K G EAR +F + ++N V+WT
Sbjct: 306 KLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTV 365
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ G+++ CF + +LF MR M + L + C Q+H L + G
Sbjct: 366 LIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSG 425
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+++ NS+I+M Y G ++ A +F
Sbjct: 426 HTRAVVISNSLISM-------------------------------YAKCGNLQNAESIFS 454
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
M +D VSWT M+T +S GN+ K+ E F+ M ++ +TW A++ ++ + E+ +
Sbjct: 455 SMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKM 514
Query: 319 FIEML-RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
+ ML KDV P+ +T ++ A G QI H VK+ + D S+ N+++++YS
Sbjct: 515 YSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYS 574
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
KCG + +A +IF + +++VS+N+MI+G++Q+G+G++A+ +F M +G P+ I++++
Sbjct: 575 KCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVA 634
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
VLS+C+H GLV+EG YF +K +N+ PG EH++CMVD+L RAG+L EA +LI+ M +
Sbjct: 635 VLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMK 694
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
P VWGALL A +TH N +LA+LAA+HL +L+ + Y++L+ +Y+ GK D +VR
Sbjct: 695 PTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVR 754
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+ K I+K+PG SW+ +K+KVH+F A
Sbjct: 755 KLMRDKGIKKNPGYSWMEVKNKVHVFKA 782
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 193/372 (51%), Gaps = 33/372 (8%)
Query: 75 NALISGYLKVGRCEEAARIFEA-MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N L+ YL G +A + + E +V+ M++GY K G + +A E+F +MP ++V
Sbjct: 67 NTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDV 126
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHG 192
+W ++ GY + F D + F+SMRR G + N+ T ++CG + +Q+ G
Sbjct: 127 TSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLG 186
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
L+++FGF D + I+ M+ R G +D A+K FS + + NS+++GY + ++
Sbjct: 187 LLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDH 246
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A +ELF MPE+D V+W ++S + +
Sbjct: 247 A-------------------------------LELFESMPERDVVSWNMMVSALSQSGRA 275
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA ++M + VR + T +S L+A A ++L G Q+HA V++ D + +++
Sbjct: 276 REALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAM 335
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V LY+KCG +A R+F+++ +RN VS+ +I GF Q G E+L LF +M+ E + +Q
Sbjct: 336 VELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQ 395
Query: 433 ITFLSVLSACNH 444
+++S C++
Sbjct: 396 FALATIISGCSN 407
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 34/164 (20%)
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCG----------------NVV-------------- 383
H +V + + S V +QN+L+ Y CG NV+
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 384 --DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG-LVPNQITFLSVLS 440
DA +F + R++ S+N+++SG+ Q+G +A+ F M+ G +PN TF +
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
+C +G E + + T + + P+ +VD+ R G++
Sbjct: 171 SCGALGW-HEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAV 213
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 10 NAMITALINNNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
NA+IT + + C I EA +IF + ++ VS+ AMITG+ + GM +A E++ +M +
Sbjct: 567 NAVIT--MYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKG 624
Query: 69 R--DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG-----SMVDGYCKKGRVIEA 121
D + A++S G +E F+ + V+ G MVD + G +IEA
Sbjct: 625 AKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEA 684
Query: 122 REIFDKMPEKNVV-AWTAMV 140
+ + D+MP K W A++
Sbjct: 685 KNLIDEMPMKPTAEVWGALL 704
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/648 (31%), Positives = 351/648 (54%), Gaps = 44/648 (6%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALIS 79
S+ + +F M ++N VS+ +++ G+ + G+ +A +L+ M + A++
Sbjct: 142 SVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLG 201
Query: 80 GYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G G E+ ++ ++ + + SMV+ Y K V +A+ +FD M +N V+
Sbjct: 202 GLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVS 261
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W +M+ G++ + F+LF MR G+ + + C Q+H V
Sbjct: 262 WNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVI 321
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDAVSWNSLISGYVHNGEIEEAY 254
+ G D+D+ + +++ Y + +D+A K+F MM ++ VSW ++ISGYV NG + A
Sbjct: 322 KNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAM 381
Query: 255 RLFERMPGK----DFVSWTTMITG-------------------------------FSSKG 279
LF +M + + +++T++T +S G
Sbjct: 382 NLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIG 441
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+ ++ ++F ++ EKD V W+A++SG+ E A + F+++ ++ V PN+ T SSVL+
Sbjct: 442 DANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLN 501
Query: 340 ASAA-TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A AA TA++ QG Q H+ +K + + + ++LV++Y+K GN+ A +F +R++V
Sbjct: 502 ACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLV 561
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+NSMISG+AQ+G G+++L +F +M+ + L + ITF+ V+SAC H GLV EG YF M
Sbjct: 562 SWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLM 621
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
Y+I P EHY+CMVD+ RAG L +A+DLIN M F +W LL A R HLN+ L
Sbjct: 622 VKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQL 681
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+LAA+ L+ L+P + YV+LS++Y+ G ++ +VR +K+++K G SWI +K+
Sbjct: 682 GELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKN 741
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD-WPKHDWSLLGLERD 625
K F+AG S I + L+ +S K+ +P + L +E +
Sbjct: 742 KTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEE 789
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 236/468 (50%), Gaps = 64/468 (13%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRC 87
++F P + ++ F R EA L++ + R S + +S LKV C
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGL--RRSGSPTDGSSLSCVLKVCGC 104
Query: 88 EEAARIFEAMVEK-------------DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+F+ +V K DV S+VD Y K V + +FD+M KNVV
Sbjct: 105 -----LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVV 159
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WT+++ GY + E LF M+ G+ N T + +GVQVH +V
Sbjct: 160 SWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMV 219
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G D I +GNS++ MY + + +A VF M R+AVSWNS+I+G+V NG EA+
Sbjct: 220 IKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAF 279
Query: 255 RLFERM-------------------------------------PGKDF--VSWTTMITGF 275
LF RM G DF T ++ +
Sbjct: 280 ELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAY 339
Query: 276 SSKGNLEKSIELFNMMPE-KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
S ++ + +LF MM ++ V+WTAIISG+V N + + A F +M R+ VRPN T
Sbjct: 340 SKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTY 399
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S++L+A+AA + SQIHA VVK N E+ S+ +L YSK G+ +A +IF IDE
Sbjct: 400 STILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDE 455
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
++IV++++M+SG+AQ G E A+ +F ++ EG+ PN+ TF SVL+AC
Sbjct: 456 KDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNAC 503
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 218/449 (48%), Gaps = 54/449 (12%)
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
++++FD+ P++ + ++ + + D ++ +LFL +RR G + +L+ + + CG
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F G QVH + GF D+ +G S++ MY + +++ +VF M ++ VSW S
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 240 LISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIE--------- 286
L++GY NG E+A +LF +M + ++ ++ G ++ G +EK ++
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223
Query: 287 --------------------------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
+F+ M ++ V+W ++I+GFV N EAF F
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M + V+ Q ++V+ A ++ Q+H V+K + D++I+ +L+ YSKC
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343
Query: 381 NVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ DA+++F + +N+VS+ ++ISG+ QNG + A+NLF +M+ EG+ PN T+ ++L
Sbjct: 344 EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTIL 403
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
+A V I+ +KT N E P + D + G EA + + E
Sbjct: 404 TA---NAAVSPSQIHALVVKT--NYENSPSVGTALSDSYSKIGDANEAAKIF-ELIDEKD 457
Query: 500 PGVWGALLGA--------GRTHLNLDLAK 520
W A+L G + L LAK
Sbjct: 458 IVAWSAMLSGYAQMGDIEGAVKIFLQLAK 486
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 202/423 (47%), Gaps = 61/423 (14%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N+M+ + + + + +A +F +M RNAVS+ +MI GFV G+ EA EL+ M R
Sbjct: 232 NSMVN-MYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM--RLE 288
Query: 70 DSVCSNALISGYLKVGRCEEAARI-FEAMVEKDVVAWGSMVD---------GYCKKGRVI 119
+ + + +K+ C + F + V+ GS D Y K +
Sbjct: 289 GVKLTQTIFATVIKL--CANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346
Query: 120 EAREIFDKMPE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+A ++F M +NVV+WTA++ GY++ + +LF MRR G+ N T + + A
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTAN 406
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
Q+H LV + ++ +G ++ Y ++G +EA K+F ++ ++D V+W+
Sbjct: 407 AAV----SPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWS 462
Query: 239 SLISGYVHNGEIEEAYRLFERMP---------------------------GKDFVSW--- 268
+++SGY G+IE A ++F ++ GK F S
Sbjct: 463 AMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIK 522
Query: 269 ----------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+ ++T ++ +GN+E + E+F ++D V+W ++ISG+ + +++ +
Sbjct: 523 SGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKI 582
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYS 377
F EM K++ + +T V+SA +N+G + +VK ++ + + +V LYS
Sbjct: 583 FEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYS 642
Query: 378 KCG 380
+ G
Sbjct: 643 RAG 645
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 195/568 (34%), Positives = 305/568 (53%), Gaps = 40/568 (7%)
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
+G C A + + + ++ ++VD YCK RV AR++FDKMP+++ V W M+ G
Sbjct: 121 LGMCLHAHAVVDGF-DSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGL 179
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
++ C++D +F M G+ +S T+ + A + G+ + L + GF +D
Sbjct: 180 VRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDD 239
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-ERMPG 262
+ +I+++ + +D A +F M+ K D VS+N+LISG+ NGE E A + F E +
Sbjct: 240 YVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVS 299
Query: 263 KDFVSWTTM------------------ITGFSSKGN--LEKSI----------------- 285
VS +TM I GF K L+ S+
Sbjct: 300 GQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLA 359
Query: 286 -ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+LF+ EK W A+ISG+ + E A F EM+ + PN +T++S+LSA A
Sbjct: 360 RQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQL 419
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L+ G +H + N+E ++ + +L+ +Y+KCGN+ +A ++F E+N V++N+MI
Sbjct: 420 GALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMI 479
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
G+ +G G+EAL LF +M G P+ +TFLSVL AC+H GLV EG F +M Y I
Sbjct: 480 FGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRI 539
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
EP EHYACMVDILGRAG L +A++ I M EP P VWG LLGA H + +LA++A++
Sbjct: 540 EPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASE 599
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
L EL+P + YV+LS++YSV VR K + + K+PGC+ I + H+F+
Sbjct: 600 RLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFV 659
Query: 585 AGRKSCLDLKEIEVTLQTISKGTKEFDW 612
G +S I L+ ++ +E +
Sbjct: 660 CGDRSHSQTTSIYAKLEELTGKMREMGY 687
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 232/514 (45%), Gaps = 55/514 (10%)
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY-MKV 146
E A++ + D+ + G AR +F +P+ ++ + ++ G+
Sbjct: 26 ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSP 85
Query: 147 DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
D F L ++ ++ ++ T A G+ +H GFD ++ +
Sbjct: 86 DASSISFYTHL-LKNTTLSPDNFTYAFAISASPD---DNLGMCLHAHAVVDGFDSNLFVA 141
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK--- 263
++++ +Y + + A KVF M RD V WN++I+G V N +++ ++F+ M +
Sbjct: 142 SALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVR 201
Query: 264 -------------------------------------DFVSWTTMITGFSSKGNLEKSIE 286
D+V T +I+ FS +++ +
Sbjct: 202 LDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV-LTGLISVFSKCEDVDTARL 260
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
LF M+ + D V++ A+ISGF N + E A ++F E+L R + T+ ++ S+
Sbjct: 261 LFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGH 320
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L+ I VK S+ +L ++YS+ + A ++F E+ + ++N+MISG
Sbjct: 321 LHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISG 380
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+AQ+GL E A++LF++M PN +T S+LSAC +G + G + +K+ N+E
Sbjct: 381 YAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKS-KNLEQ 439
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAGRTHLNLDLAKLAAQH 525
++D+ + G+++EA L + +T E W ++ G G + KL +
Sbjct: 440 NIYVSTALIDMYAKCGNISEASQLFD-LTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEM 498
Query: 526 L-MELEPDSATPYVVLSDLY--SVIGKKRDGNRV 556
L + +P S T LS LY S G R+G+ +
Sbjct: 499 LHLGFQPSSVT---FLSVLYACSHAGLVREGDEI 529
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 195/479 (40%), Gaps = 85/479 (17%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW-- 68
+AL++ C + A ++F MP R+ V + MITG VR + ++ +++ +M A+
Sbjct: 142 SALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVR 201
Query: 69 RDSVCSNALISGY-----LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
DS ++ +KVG + + D V G ++ + K V AR
Sbjct: 202 LDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTG-LISVFSKCEDVDTARL 260
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F + + ++V++ A++ G+ E F + G +S T+ L F
Sbjct: 261 LFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGH 320
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+ G + G + ++ T+Y RL +D A ++F S++ +WN++ISG
Sbjct: 321 LHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISG 380
Query: 244 YVHNGEIEEAYRLFERMPGKDFVS------------------------------------ 267
Y +G E A LF+ M +F
Sbjct: 381 YAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQN 440
Query: 268 ---WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
T +I ++ GN+ ++ +LF++ EK+ VTW +I G+ + +EA + F EML
Sbjct: 441 IYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLH 500
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQI-HAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+P+ +T SVL A + + +G +I HA +V
Sbjct: 501 LGFQPSSVTFLSVLYACSHAGLVREGDEIFHA--------------------------MV 534
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ YRI E Y M+ + G E+AL RKM E P + ++L AC
Sbjct: 535 NKYRI-----EPLAEHYACMVDILGRAGQLEKALEFIRKMPVE---PGPAVWGTLLGAC 585
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 161/375 (42%), Gaps = 83/375 (22%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGF-----VRR 51
M DR + +N MIT L+ NC ++ ++F M + ++ + A ++ V+
Sbjct: 164 MPDRDTVLWNTMITGLV-RNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKV 222
Query: 52 GM------------------------FYEAEE-----LYVNMPARWRDSVCSNALISGYL 82
GM F + E+ L M R D V NALISG+
Sbjct: 223 GMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGM-IRKPDLVSYNALISGFS 281
Query: 83 KVGRCEEAARIF-EAMVEKDVVAWGSMV------------------DGYC-KKGRVIE-- 120
G E A + F E +V V+ +MV G+C K G +++
Sbjct: 282 CNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPS 341
Query: 121 -----------------AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
AR++FD+ EK V AW AM+ GY + E LF M
Sbjct: 342 VSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTE 401
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
N +T+T + AC + G VH L+ + +I + ++I MY + G + EA+
Sbjct: 402 FTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEAS 461
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKG 279
++F + S+++ V+WN++I GY +G +EA +LF M F V++ +++ S G
Sbjct: 462 QLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAG 521
Query: 280 NLEKSIELFNMMPEK 294
+ + E+F+ M K
Sbjct: 522 LVREGDEIFHAMVNK 536
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 192/585 (32%), Positives = 327/585 (55%), Gaps = 43/585 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-- 67
N+M+ + + A E+F +MP R+ VS+ M++ + G EA ++ V+M ++
Sbjct: 208 NSMLVGYVKTY-GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 68 ------WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
+ S+ + A +S L+ G+ + A++ + D ++V+ Y K G EA
Sbjct: 267 RLDSTTYTSSLTACARLSS-LRWGK-QLHAQVIRNLPCIDPYVASALVELYAKCGCFKEA 324
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
+ +F+ + ++N VAWT ++ G+++ CF + +LF MR M + L L C
Sbjct: 325 KGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSR 384
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
G Q+H L + G +++ NS+I+M
Sbjct: 385 MDLCLGRQLHSLCLKSGQIQAVVVSNSLISM----------------------------- 415
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
Y ++ A +F M KD VSWT+MIT S GN+ K+ E F+ M K+ +TW A
Sbjct: 416 --YAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNA 473
Query: 302 IISGFVNNEQYEEAFRWFIEML-RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
++ ++ + E+ R + ML KDVRP+ +T ++ A G QI VK+
Sbjct: 474 MLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV 533
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ D S+ N+++++YSKCG +++A ++F ++ ++IVS+N+MI+G++Q+G+G++A+ +F
Sbjct: 534 GLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIF 593
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+ G P+ I++++VLS C+H GLV+EG YF MK ++NI PG EH++CMVD+LGR
Sbjct: 594 DDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGR 653
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA DLI+ M +P VWGALL A + H N +LA+LAA+H+ EL+ + Y+++
Sbjct: 654 AGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLM 713
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+ +Y+ GK D ++R + K I+K+PG SW+ + +KVH+F A
Sbjct: 714 AKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKA 758
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 186/370 (50%), Gaps = 33/370 (8%)
Query: 75 NALISGYLKVGRCEEAARIF-EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N L+ YL G +A R+ + +V+ M++GY K GR+ +A E+F +MP ++V
Sbjct: 43 NTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDV 102
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGG-MAFNSITLTILFEACGRFFRYREGVQVHG 192
+W ++ GY + + + F+SM R G + N+ T ++CG +Q+ G
Sbjct: 103 ASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLG 162
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+V +FG D + +++ M+ R G +D A+
Sbjct: 163 MVQKFGSQDDSDVAAALVDMFVRCGTVDLAS----------------------------- 193
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
RLF R+ +M+ G+ ++ ++ELF+ MPE+D V+W ++S + +
Sbjct: 194 --RLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRV 251
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA ++M K VR + T +S L+A A ++L G Q+HA V++ D + ++L
Sbjct: 252 REALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASAL 311
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V LY+KCG +A +F ++ +RN V++ +I+GF Q+G E++ LF +M+ E + +Q
Sbjct: 312 VELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQ 371
Query: 433 ITFLSVLSAC 442
+++S C
Sbjct: 372 FALATLISGC 381
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 45/316 (14%)
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-ERMPGKDFVSWTTM 271
+GRL + A+ VF N+L+ Y+ G + +A RL + + ++ M
Sbjct: 27 HGRLVAVGLASAVFLQ---------NTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVM 77
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPN 330
+ G+ G L ++ELF MP +D +W ++SG+ ++QY + F+ M R D PN
Sbjct: 78 LNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPN 137
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T + + + A + Q+ V K + D + +LV ++ +CG V A R+F
Sbjct: 138 AFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFV 197
Query: 391 NIDE-------------------------------RNIVSYNSMISGFAQNGLGEEALNL 419
I E R++VS+N M+S +Q+G EAL++
Sbjct: 198 RIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDM 257
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDIL 478
M+ +G+ + T+ S L+AC + + G ++ + ++ L I+P + +V++
Sbjct: 258 VVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVA--SALVELY 315
Query: 479 GRAGSLAEAIDLINSM 494
+ G EA + NS+
Sbjct: 316 AKCGCFKEAKGVFNSL 331
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 192/575 (33%), Positives = 317/575 (55%), Gaps = 34/575 (5%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A + F M RN +++ +I + G +A +Y P + S S +++G + G
Sbjct: 278 AVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTS--MLTGLARYG 335
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
R ++A +F+ + E +VV+W +M+ GY + V EA ++F++MP +N ++W M+ GY +
Sbjct: 336 RIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYAR 395
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
E ++ R GM + +LT F AC G QVH L + G ++ +
Sbjct: 396 NGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYV 455
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
N++IT+YG+ Y G + + +F+RM KD
Sbjct: 456 CNALITLYGK----------------------------YRSIGSVRQ---IFDRMTVKDT 484
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
VS+ + ++ +++ ++FN MP D V+WT IIS +Q EA F ML +
Sbjct: 485 VSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHE 544
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
PN L+ +L S G QIH +K+ M+S + + N+LVS+Y KC + D+
Sbjct: 545 RELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSA-DS 603
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F +++ER+I ++N++I+G+AQ+GLG EA+ +++ M G++PN++TF+ +L AC+H
Sbjct: 604 LKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHS 663
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GLV+EG +FKSM + Y + P EHYACMVD+LGRAG + A I M EP +W A
Sbjct: 664 GLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSA 723
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA + H N+++ + AA+ L +EP +A YV+LS++YS G + +VR K + +
Sbjct: 724 LLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGV 783
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
K PGCSW+ +K+K+H F+ G + ++ I TL
Sbjct: 784 NKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATL 818
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 259/525 (49%), Gaps = 72/525 (13%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMI-------------------------------TGFVRR 51
++EA E+F +MP R+ +++ +MI +G+ R
Sbjct: 49 LHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARA 108
Query: 52 GMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
G +A ++ M R ++V NA+++ Y++ G A ++F+AM +DV +W +M+ G
Sbjct: 109 GRVRDARRVFDGMGVR--NTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTG 166
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
YC + EAR +F++MPE+N V+WT M+ GY+ ++ +D+F +M GM L
Sbjct: 167 YCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNL 226
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR-LGFMDEANKVFSMMS 230
+ A + +H LV + GF+ D+++G +I+ Y + + +D A K F M+
Sbjct: 227 VSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMA 286
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK--------------------------- 263
R+ +W+++I+ G I++A+ +++R P K
Sbjct: 287 ARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQ 346
Query: 264 ----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
+ VSW MITG+ ++++ +LFN MP ++ ++W +I+G+ N + E+A
Sbjct: 347 IHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSL 406
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+ RK + P+ +L+S A + L G Q+H+ VK + + + N+L++LY K
Sbjct: 407 QALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKY 466
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
++ +IF + ++ VSYNS +S QN L +EA ++F M P+ +++ +++
Sbjct: 467 RSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPS----PDVVSWTTII 522
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIE-PGPEHYACMVDILGRAGS 483
SAC E F+SM L+ E P P ++ + G G+
Sbjct: 523 SACAQADQGNEAVEIFRSM--LHERELPNPPILTILLGLSGNLGA 565
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 193/397 (48%), Gaps = 49/397 (12%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
GR+ EARE+FD MP ++++AW +M+ Y + G L ++ G + +I
Sbjct: 47 GRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTI------ 100
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+++ Y R G + +A +VF M R+ V
Sbjct: 101 ---------------------------------LLSGYARAGRVRDARRVFDGMGVRNTV 127
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
+WN++++ YV NG+I A +LF+ MP +D SW TM+TG+ +E++ LF MPE++
Sbjct: 128 AWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERN 187
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V+WT +ISG+V EQ+ A+ F ML + + P Q L SVLSA IH
Sbjct: 188 GVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHV 247
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVD-AYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
V K E DV + ++++ Y+K N++D A + F + RN +++++I+ +Q G +
Sbjct: 248 LVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRID 307
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
+A ++++ + VP++ + L+ L+ G +++ I F + EP + M
Sbjct: 308 DAFAVYQRDPLKS-VPSRTSMLTGLA---RYGRIDDAKILFDQIH-----EPNVVSWNAM 358
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
+ + + EA DL N M F G + G R
Sbjct: 359 ITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYAR 395
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 221/645 (34%), Positives = 342/645 (53%), Gaps = 49/645 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARW 68
NAM++ L+ + A+ +FA MP R+ S+ M+ G+ + G+ EA +LY M A
Sbjct: 127 NAMLSMLVRFG-ETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGV 185
Query: 69 RDSV----CSNALISGY--LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
R V C G ++GR E A + ++V +++ Y K G V+ AR
Sbjct: 186 RPDVYTFPCVLRSCGGVPDWRMGR-EVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAAR 244
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
++FD M + ++W AM+ G+ + G +LFL+M + N +T+T + A G
Sbjct: 245 KVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLS 304
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
++HGL + GF D+ NS+I MY LG M +A VFS M RDA++W ++IS
Sbjct: 305 DVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMIS 364
Query: 243 GYVHNGEIEEAY-----------------------------------RLFERMPGKDFVS 267
GY NG ++A +L E K F+S
Sbjct: 365 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFIS 424
Query: 268 WTTMITG----FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ + ++ ++K+IE+F M EKD V+W+++I+GF N + EA +F ML
Sbjct: 425 YIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHML 484
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
DV+PN +T + L+A AAT L G +IHAHV++ +E + + N+L+ LY KCG
Sbjct: 485 -ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTG 543
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A+ F +++VS+N MI+GF +G G+ AL+ F +M G P+++TF+++L AC+
Sbjct: 544 YAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACS 603
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
G+V EG+ F SM Y+I P +HYACMVD+L RAG L EA + IN M P VW
Sbjct: 604 RGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVW 663
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
GALL R H +++L +LAA++++ LEP+ A +V+L DLY+ RVR + K
Sbjct: 664 GALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREK 723
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+ GCSW+ +K VH FL +S ++EI L+ I + K
Sbjct: 724 GLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMK 768
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 136/274 (49%), Gaps = 39/274 (14%)
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ + LGN++++M R G A +VF+ M +RD SWN ++ GY +G ++EA L+ RM
Sbjct: 121 FGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRM 180
Query: 261 ------P---------------------------------GKDFVSWTTMITGFSSKGNL 281
P G++ ++T ++ G++
Sbjct: 181 MWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDV 240
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ ++F+ M D ++W A+I+G N + F+ ML +V+PN +T++SV AS
Sbjct: 241 MAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVAS 300
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ + ++H VK DV+ NSL+ +Y+ G + A +F+ +D R+ +++
Sbjct: 301 GLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWT 360
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
+MISG+ +NG ++AL ++ M+ + P+ IT
Sbjct: 361 AMISGYEKNGFPDKALEVYALMEVNNVSPDDITI 394
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+ G + AH + + + N+++S+ + G A+R+F + ER++ S+N M+
Sbjct: 103 AVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVG 162
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
G+ ++GL +EAL+L+ +M G+ P+ TF VL +C V
Sbjct: 163 GYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGV 202
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 192/542 (35%), Positives = 300/542 (55%), Gaps = 72/542 (13%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV 103
MIT + R G +A L+ +P +W + VC NA
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKW-NPVCCNA--------------------------- 32
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
MV GY K + EAR +FD MP K++V+W +M+ G+ MR G
Sbjct: 33 ----MVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLT----------GYTRNGEMRLGL 78
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
F + + D++ N ++ + +G ++ +
Sbjct: 79 QFFEEMA-----------------------------ERDVVSWNLMVDGFVEVGDLNSSW 109
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEK 283
+ F + + VSW +++ G+ G+I EA RLF++MP ++ V+W MI + ++++
Sbjct: 110 EFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDE 169
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+I LF MPEK+ ++WT +I+G+V + +EA + +M ++ +P+Q T + LS+ A
Sbjct: 170 AISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN-KPDQSTFACGLSSCAH 228
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
A L G Q+H V+K +D+ + N+L+++Y+KCG++ A +F +ID ++VS+NS+
Sbjct: 229 LAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSL 288
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I+ +A NG G EAL LF KM+ EG+ P+++TF+ +LSAC+HVGL+++G FK M YN
Sbjct: 289 IAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYN 348
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
IEP EHYACMVD+LGRAG L EA L+ M G+WGALLGA R H NL+LAK AA
Sbjct: 349 IEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAA 408
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ L+E EP + YV+LS++ + G+ + RVR K K K PG SWI L+++VH F
Sbjct: 409 EKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAF 468
Query: 584 LA 585
L+
Sbjct: 469 LS 470
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 158/322 (49%), Gaps = 37/322 (11%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NAM+ N EA +F MP ++ VS+ +M+TG+ R G + + M R
Sbjct: 31 NAMVAGYAKNR-QFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAE--R 87
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V N ++ G+++VG + FE + + V+W +M+ G+ + G++ EAR +FD+MP
Sbjct: 88 DVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMP 147
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSI------------------- 169
+NVVAW AM+ Y++ ++ LF+ M + +++ ++
Sbjct: 148 IRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQ 207
Query: 170 ----------TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
T +C + G Q+H LV + G+ D+ + N++ITMY + G +
Sbjct: 208 MPYRNKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSI 267
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGF 275
A +F + D VSWNSLI+ Y NG EA +LF +M D V++ +++
Sbjct: 268 SSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSAC 327
Query: 276 SSKGNLEKSIELFNMMPEKDDV 297
S G +++ ++LF M + ++
Sbjct: 328 SHVGLIDQGLKLFKCMVQAYNI 349
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 14/275 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R ++NAMI A + N C + EA +F MP +N++S+ +I G+VR G EA +L
Sbjct: 146 MPIRNVVAWNAMIAAYVQN-CHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQL 204
Query: 61 YVNMPARWRDS----VC--SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
MP R + C S+ L+VG+ + + ++ D+ +++ Y K
Sbjct: 205 LNQMPYRNKPDQSTFACGLSSCAHLAALQVGK-QLHQLVMKSGYATDLFVSNALITMYAK 263
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + A +F + +VV+W +++ Y + LF M G+A + +T +
Sbjct: 264 CGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGI 323
Query: 175 FEACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK-VFSMMSKR 232
AC +G+++ +V + + ++ + GR G ++EA + V M
Sbjct: 324 LSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINA 383
Query: 233 DAVSWNSLISGYVHNGEIE----EAYRLFERMPGK 263
+A W +L+ +G +E A +L E P K
Sbjct: 384 NAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHK 418
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 190/539 (35%), Positives = 307/539 (56%), Gaps = 31/539 (5%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V N++++GY+ VG EEA +++ M E++V+A SM+ + KKG V EA ++F++M
Sbjct: 191 DMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMK 250
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+K++V+W+A++ Y + + +E+ LF M G+ + + + + AC R G
Sbjct: 251 QKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKL 310
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHGLV + G + + L N++I MY E
Sbjct: 311 VHGLVVKVGIETYVNLQNALIHMYSSCE-------------------------------E 339
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+ A +LF D +SW +MI+G+ G +EK+ LF+ MP+KD+V+W+A+ISG+
Sbjct: 340 VVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQ 399
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
+++ E F EM + +P++ L SV+SA A L+QG IHA++ K ++ ++ +
Sbjct: 400 DRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILG 459
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+L+++Y K G V DA +F ++E+ + ++N++I G A NGL +++L F +MK+ G+
Sbjct: 460 TTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVT 519
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
PN+ITF++VL AC H+GLV+EG +F SM + I P +HY CMVD+LGRAG L EA +
Sbjct: 520 PNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEE 579
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
LI SM P WGALLGA + + + + + + L+EL PD V+LS++Y+ G
Sbjct: 580 LIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGN 639
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
D VR + + K+PGCS I +VH FLAG K+ + IE L ++K K
Sbjct: 640 WVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLK 698
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 224/422 (53%), Gaps = 39/422 (9%)
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
++ +IF + N M+ GYM+ + ++ M +A ++ T ILF++C
Sbjct: 78 QSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCS 137
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
+G + V + GFD D+ + N++I MY G + +A KVF S D VSWNS
Sbjct: 138 IRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNS 197
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+++GYV G +EEA +++RMP ++ ++ +MI F KGN+E++ +LFN M +KD V+W
Sbjct: 198 MLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSW 257
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+A+IS + NE YEEA F EM + +++ + SVLSA + + G +H VVK
Sbjct: 258 SALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVK 317
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFT----------------------------- 390
+ +E+ V++QN+L+ +YS C VV A ++F+
Sbjct: 318 VGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARAL 377
Query: 391 --NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
++ +++ VS+++MISG+AQ E L LF++M+ EG P++ +SV+SAC H+ +
Sbjct: 378 FDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAAL 437
Query: 449 EEG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
++G Y + NI G ++++ + G + +A+++ + E W A
Sbjct: 438 DQGKWIHAYIRKNGLKINIILG----TTLINMYMKLGCVEDALEVFKGLE-EKGVSTWNA 492
Query: 506 LL 507
L+
Sbjct: 493 LI 494
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 134/297 (45%), Gaps = 16/297 (5%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+N+MI+ + I +A +F +MP ++ VS++AMI+G+ ++ F E L+ M
Sbjct: 357 SWNSMISGYVKCG-EIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIE 415
Query: 68 WR--DSVCSNALISGYLKVGRCEEA----ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
D ++IS + ++ A I + ++ +++ ++++ Y K G V +A
Sbjct: 416 GTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDA 475
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
E+F + EK V W A++ G + F M+ G+ N IT + AC
Sbjct: 476 LEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHM 535
Query: 182 FRYREG-VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNS 239
EG + ++ +I ++ + GR G + EA ++ SM D +W +
Sbjct: 536 GLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGA 595
Query: 240 LISGYVHNGEIEEAYR----LFERMPGKDFVSWTTMITG-FSSKGNLEKSIELFNMM 291
L+ G+ E R L E P D + +++ ++SKGN +E+ MM
Sbjct: 596 LLGACKKYGDNETGERIGRKLVELHPDHD--GFNVLLSNIYASKGNWVDVLEVRGMM 650
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
N+ +S ++F+ + + ++ G++ +A + ML +V + T +
Sbjct: 75 NINQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQ 134
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
+ + G I HV+K+ +SDV IQN+L+++Y+ CGN+ DA ++F ++VS
Sbjct: 135 SCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVS 194
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+NSM++G+ G EEA +++ +M + ++ + S++ G VEE F MK
Sbjct: 195 WNSMLAGYVLVGNVEEAKDVYDRMPERNVIASN----SMIVLFGKKGNVEEACKLFNEMK 250
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 312/550 (56%), Gaps = 34/550 (6%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
++ +N LI+ Y K G A ++F+ M +++ +W M+ GY K G++ AR++FDKMP
Sbjct: 85 NTFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMP 144
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
EK+VV+W MV Y K D + +RR G+ +N + L C + Q
Sbjct: 145 EKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQ 204
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
HG V GF ++++ +S++ Y + E
Sbjct: 205 AHGQVLVAGFLSNLVISSSVLDAYAKCS-------------------------------E 233
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+ +A RLF+ M +D ++WTTM++G++ G++E + ELF++MPEK+ V WT++I+G+ +
Sbjct: 234 MGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARH 293
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
+ +A F +M+ ++RP+Q T SS L ASA+ A+LN G QIH ++++ N+ + +
Sbjct: 294 DLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVV 353
Query: 370 NSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
+SL+ +YSKCG + +F + D+ ++V +N++IS AQ+G G+EA+ +F M G+
Sbjct: 354 SSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGM 413
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
P++IT + +L+AC+H GLV+EG ++S+ + + + P EHYAC++D+LGRAG +
Sbjct: 414 KPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLM 473
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
+ + M +P +W ALLG R H N++ + A+ ++EL+P S+ YV+LS +++ +G
Sbjct: 474 NQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVG 533
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE-IEVTLQTISKGT 607
+ VR + +RK SWI +++KVH F A + LKE I + L+ ++
Sbjct: 534 RWELVENVRQLMNERHVRKDRAISWIEIENKVHSFTASDR-LHPLKEVIYLALKQLAGHM 592
Query: 608 KEFDWPKHDW 617
+E +W
Sbjct: 593 EEVLSTNREW 602
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 167/332 (50%), Gaps = 12/332 (3%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY-DIILGNSIITMYGRLG 217
+ R G+ S TL L + C + G VH + G + L N +I MY + G
Sbjct: 41 LSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCG 100
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSS 277
A KVF MS R+ SWN ++SGY G+I+ A +LF++MP KD VSW TM+ ++
Sbjct: 101 DYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAK 160
Query: 278 KGNLEKSI----ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
G ++ EL + ++ ++ +++ V ++ E + + ++L N +
Sbjct: 161 SGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVI 220
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
SSVL A A + + ++ ++ DV ++VS Y++ G+V A +F +
Sbjct: 221 SSSVLDAYAKCSEMGDARRLFDEMII----RDVLAWTTMVSGYAQWGDVEAARELFDLMP 276
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-F 452
E+N V++ S+I+G+A++ LG +AL LF KM + P+Q TF S L A + + G
Sbjct: 277 EKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQ 336
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
I+ ++T NI P + ++D+ + G L
Sbjct: 337 IHGYLIRT--NIRPNTIVVSSLIDMYSKCGCL 366
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 142/351 (40%), Gaps = 80/351 (22%)
Query: 16 LIN--NNCSIY-EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSV 72
LIN + C Y A+++F M RN S+ M++G+ + G A +L+ MP + D V
Sbjct: 92 LINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEK--DVV 149
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVE--------------------------------- 99
N ++ Y K G C +A R + +
Sbjct: 150 SWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQV 209
Query: 100 ------KDVVAWGSMVDGYCKKGRVIEAREIFDK-------------------------- 127
++V S++D Y K + +AR +FD+
Sbjct: 210 LVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAAR 269
Query: 128 -----MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
MPEKN VAWT+++ GY + D +LF M + + T + A
Sbjct: 270 ELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIA 329
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLI 241
G Q+HG + R + I+ +S+I MY + G ++ VF +M K D V WN++I
Sbjct: 330 SLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTII 389
Query: 242 SGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELF 288
S +G +EA ++F+ M D ++ ++ S G +++ + L+
Sbjct: 390 SSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLY 440
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 117/246 (47%), Gaps = 13/246 (5%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA--------RWRDSVCSNAL 77
A E+F MP +N V++ ++I G+ R + ++A EL+ M A + +C++A
Sbjct: 268 ARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASAS 327
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAW 136
I+ L G+ + + + + + S++D Y K G + R +FD M +K +VV W
Sbjct: 328 IAS-LNHGK-QIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLW 385
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH-GLVS 195
++ + ++ +F M R GM + ITL +L AC +EG++++ + S
Sbjct: 386 NTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITS 445
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDE-ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
G + +I + GR G D N++ M K + WN+L+ +G IE
Sbjct: 446 CHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGR 505
Query: 255 RLFERM 260
+ E++
Sbjct: 506 EVAEKI 511
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 285/483 (59%), Gaps = 32/483 (6%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F+ + + V W + GY + LF+ M+R + T L +AC +
Sbjct: 79 VFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCG 138
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG-------------------------- 217
+EGV HG R G D+ + S+I +YG+ G
Sbjct: 139 VKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAG 198
Query: 218 ---FMD--EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMI 272
F D EA K+F M +++AVSWN++ISGYV G++ A ++F+ MP ++ VS+TTMI
Sbjct: 199 YASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMI 258
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
G++ G++ + +F PE+D V W+A+ISG+V N Q EA + F+EM ++V+P++
Sbjct: 259 DGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEF 318
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ S++SA + +L + +V K +++ + +L+ + +KCG++ A ++F
Sbjct: 319 IMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEE 378
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ +R+++SY SM+ G + +G G +A++LF +M +EGL P+ + F +L+AC+ GLV+EG
Sbjct: 379 MPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEG 438
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
YF+SMKT Y+I P P+HYACMVD+LGRAG L EA +L+ SM EP G WGALLGA +
Sbjct: 439 CYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACK 498
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
H +++L ++ A L ELEP +A YV+LS++Y+ + D + +R K + + IRK PGC
Sbjct: 499 LHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGC 558
Query: 572 SWI 574
SWI
Sbjct: 559 SWI 561
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 153/288 (53%), Gaps = 10/288 (3%)
Query: 12 MITALIN--NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
++T+LI+ C I A ++F M RN VS+ AMI G+ EA +L+ MP +
Sbjct: 160 VMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEK- 218
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
++V NA+ISGY+K G A ++F+ M ++VV++ +M+DGY K G + AR +F++
Sbjct: 219 -NAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEA 277
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
PE++VVAW+A++ GY++ + +FL M + + + L AC +
Sbjct: 278 PERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAK 337
Query: 189 QVHGLVSRFGFD-YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
V V + D + + ++I M + G MD A K+F M KRD +S+ S++ G +
Sbjct: 338 WVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIH 397
Query: 248 GEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
G +A LF RM + D V++T ++T S G +++ F M
Sbjct: 398 GCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESM 445
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 157/364 (43%), Gaps = 90/364 (24%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+LI Y K G A ++F+ M E++VV+W +M+ GY ++EAR++FD+MPEKN V
Sbjct: 162 TSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAV 221
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W A++ GY+K +F M N ++ T + +
Sbjct: 222 SWNAIISGYVKCGDLRSARKMFDEMPHR----NVVSFTTMIDG----------------- 260
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
Y + G M A VF +RD V+W++LISGYV NG+ EA
Sbjct: 261 ------------------YAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAV 302
Query: 255 RLFERMPGK----DFVSWTTMITGFSSKGNLE---------------------------- 282
++F M + D ++++ S G+LE
Sbjct: 303 KIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDM 362
Query: 283 --------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ +LF MP++D +++ +++ G + +A F ML + + P+ +
Sbjct: 363 NAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAF 422
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS------LVSLYSKCGNVVDAYRI 388
+ +L+A + +++G +M++D SI S +V L + G + +AY +
Sbjct: 423 TVILTACSRAGLVDEGCYYFE-----SMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYEL 477
Query: 389 FTNI 392
++
Sbjct: 478 LKSM 481
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 151/346 (43%), Gaps = 49/346 (14%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
QVH + R G D + + +T+ L VF+ +S V WN+ I GY N
Sbjct: 43 QVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENY 102
Query: 249 EIEEAYRLFERMP---------------------------------------GKDFVSWT 269
+ LF RM G D T
Sbjct: 103 SVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMT 162
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
++I + G + + ++F+ M E++ V+WTA+I+G+ + EA + F EM K
Sbjct: 163 SLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEK---- 218
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N ++ ++++S L ++ + N+ S +++ Y+K G++ A +F
Sbjct: 219 NAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVS----FTTMIDGYAKSGDMASARFVF 274
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
ER++V+++++ISG+ QNG EA+ +F +M + P++ +S++SAC+ +G +E
Sbjct: 275 EEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLE 334
Query: 450 EGFIYFKSMKTLYNIEPGPEHY-ACMVDILGRAGSLAEAIDLINSM 494
+ +I+ H A ++D+ + GS+ A L M
Sbjct: 335 LA-KWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEM 379
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 23/279 (8%)
Query: 236 SWNSLISGYVHNGEIEEAY-RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
S ++L+ +E+ + R+ + +D + +T +S N + +FN +
Sbjct: 27 SISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSP 86
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
V W I G+ N FI M R D P++ T S++ A + + +G H
Sbjct: 87 STVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFH 146
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
V+ + DV + SL+ LY KCG ++ A ++F + ERN+VS+ +MI+G+A
Sbjct: 147 GSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLV 206
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE--HYA 472
EA LF +M ++ N +++ +++S G V+ G + +S + +++ P +
Sbjct: 207 EARKLFDEMPEK----NAVSWNAIIS-----GYVKCGDL--RSARKMFDEMPHRNVVSFT 255
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPG----VWGALL 507
M+D ++G +A A FE P W AL+
Sbjct: 256 TMIDGYAKSGDMASA-----RFVFEEAPERDVVAWSALI 289
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 12 MITALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PA 66
+I ALI+ N S+ A ++F MP R+ +SY +M+ G G +A L+ M
Sbjct: 355 VIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEG 414
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARIFEAM-VEKDVVA----WGSMVDGYCKKGRVIEA 121
D V +++ + G +E FE+M + +V + MVD + GR+ EA
Sbjct: 415 LTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEA 474
Query: 122 REIFDKMP-EKNVVAWTAMVDGYMKVDC 148
E+ MP E + AW A++ G K+ C
Sbjct: 475 YELLKSMPVEPHAGAWGALL-GACKLHC 501
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 208/648 (32%), Positives = 334/648 (51%), Gaps = 49/648 (7%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
D +SA N +I L + + A +F M ++ VS+ M+ G+ G F E EL+
Sbjct: 260 DFSSAVSNGLID-LYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFD 318
Query: 63 NMP---ARWRDSVCSNALISGY----LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
M R +A ++ L+ G+ E + ++ D++ ++ Y K
Sbjct: 319 KMKLGNVRINKVSAVSAFLAAAETIDLEKGK-EIHGCALQQRIDSDILVATPLMVMYAKC 377
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G +A+++F + +++VAW+A++ ++ E+ LF M+ M N +TL +
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSIL 437
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
AC + G +H + D D+ G ++++MY + GF A F+ MS RD V
Sbjct: 438 PACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIV 497
Query: 236 SWNSLISGYVHNGEIEEAYRLFERM----------------PG----------------- 262
+WNSLI+GY G+ A +F ++ P
Sbjct: 498 TWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI 557
Query: 263 ------KDFVSWTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISGFVNNEQYEEA 315
D +I ++ G+L + LFN KD+VTW II+ ++ N +EA
Sbjct: 558 VKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA 617
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F +M ++ PN +T SVL A+A A +G HA +++M S+ + NSL+ +
Sbjct: 618 ISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDM 677
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y+KCG + + ++F +D ++ VS+N+M+SG+A +G G+ A+ LF M++ + + ++F
Sbjct: 678 YAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSF 737
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+SVLSAC H GLVEEG F SM Y+I+P EHYACMVD+LGRAG E + I M
Sbjct: 738 VSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMP 797
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNR 555
EP GVWGALLG+ R H N+ L ++A HL++LEP + +VVLS +Y+ G+ D +
Sbjct: 798 VEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGK 857
Query: 556 VRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
R K ++K+PGCSW+ LK+KVH F G KS L+ + + T+
Sbjct: 858 ARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTL 905
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 168/588 (28%), Positives = 273/588 (46%), Gaps = 65/588 (11%)
Query: 9 YNAMITALIN-----NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
++ IT LIN + C + A +F + P + + + +MI + R + EA E+Y
Sbjct: 62 HHHSITHLINLYSLFHKCDL--ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYC 119
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAM----------VEKDVVAWGSMVDGYC 113
M + + + LK C A + E + +E+DV +VD Y
Sbjct: 120 MVEKGLEP--DKYTFTFVLKA--CTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYS 175
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G + ARE+FDKMP+++VVAW AM+ G + + + D F SM+ G+ +S++L
Sbjct: 176 KMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLN 235
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
LF + +HG V F D+ + N +I +Y + G +D A +VF M +D
Sbjct: 236 LFPGICKLSNIELCRSIHGYV--FRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQD 293
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGK---- 263
VSW ++++GY HNG E LF++M GK
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHG 353
Query: 264 ---------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
D + T ++ ++ G EK+ +LF + +D V W+AII+ V EE
Sbjct: 354 CALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEE 413
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F EM + ++PN++TL S+L A A + L G IH VK +M+SD+S +LVS
Sbjct: 414 ALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVS 473
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+KCG A F + R+IV++NS+I+G+AQ G A+++F K++ + P+ T
Sbjct: 474 MYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGT 533
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ V+ AC + +++G + L E ++D+ + GSL A L N
Sbjct: 534 MVGVVPACALLNDLDQGTCIHGLIVKL-GFESDCHVKNALIDMYAKCGSLPSAEFLFNKT 592
Query: 495 TFEPPPGVWGALLGA--GRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
F W ++ A H ++ L P+S T VL
Sbjct: 593 DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 185/463 (39%), Gaps = 82/463 (17%)
Query: 14 TALIN--NNCSIYEA-FEIFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVN 63
TAL++ C + A F M R+ V++ ++I G+ + G MFY+ +N
Sbjct: 469 TALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAIN 528
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
A V + L G C I + E D +++D Y K G + A
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGL-IVKLGFESDCHVKNALIDMYAKCGSLPSAEF 587
Query: 124 IFDKMP-EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+F+K K+ V W ++ YM+ ++ F MR NS+T + A
Sbjct: 588 LFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLA 647
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+REG+ H + + GF + ++GNS+I MY + G + + K+F+ M +D VSWN+++S
Sbjct: 648 AFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLS 707
Query: 243 GYV-----------------------------------HNGEIEEAYRLFERMPGK---- 263
GY H G +EE ++F M K
Sbjct: 708 GYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIK 767
Query: 264 -DFVSWTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISG---FVNNEQYEEAFRW 318
D + M+ G ++++ +MP E D W A++ N + E A
Sbjct: 768 PDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDH 827
Query: 319 FIEMLRKDVRPNQLTLSSVLSASA-------ATATLNQ--------------GSQIHAHV 357
+++ ++ + + LSS+ + S A + +N +++HA
Sbjct: 828 LVKLEPRN-PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFR 886
Query: 358 V----KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
V +ES + N+L+ K G V D + N++E +
Sbjct: 887 VGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEED 929
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 317/570 (55%), Gaps = 9/570 (1%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW---RDSVCSNALIS 79
+++A ++ + + + Y ++ R F +A+ L +M +DS N L+
Sbjct: 7 LHQAIDLLYSHGLASFDDYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLH 66
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
Y K G+ +A +F+ M ++DV +W +++ Y K G V +FD+MP ++ V++ +
Sbjct: 67 LYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTL 126
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ + + + M+ G + +AC + R G Q+HG +
Sbjct: 127 IACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADL 186
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ + N++ MY + G +D+A +F M ++ VSWN +ISGYV G E LF
Sbjct: 187 GENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNE 246
Query: 260 MP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
M D V+ + ++ + G ++ + LF +P+KD++ WT +I G+ N + E+A
Sbjct: 247 MQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDA 306
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+ F +MLR++V+P+ T+SS++S+ A A+L G +H VV M +++ + + ++LV +
Sbjct: 307 WMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDM 366
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y KCG +DA IF + RN++++N+MI G+AQNG EAL L+ +M+ E P+ ITF
Sbjct: 367 YCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITF 426
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+ VLSAC + +V+EG YF S+ + I P +HYACM+ +LGR+GS+ +A+DLI M
Sbjct: 427 VGVLSACINADMVKEGQKYFDSISE-HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMP 485
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNR 555
EP +W LL +L A+LAA HL EL+P +A PY++LS+LY+ G+ +D
Sbjct: 486 HEPNYRIWSTLLSVCAKG-DLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAV 544
Query: 556 VRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
VR K K +K SW+ + +KVH F++
Sbjct: 545 VRSLMKEKNAKKFAAYSWVEVGNKVHRFVS 574
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 299/528 (56%), Gaps = 31/528 (5%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
DSV N++++GY+++G EEA I+ M E+ ++A SM+ + +G V+EA ++FD+M
Sbjct: 278 DSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEML 337
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
EK++V W+A++ + + + +E+ F+ M + G+ + + AC G
Sbjct: 338 EKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKL 397
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H L + G + I L N++I MY + G + A K+F
Sbjct: 398 IHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLF----------------------- 434
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+EAY L D +SW +MI+G+ ++ + +F+ MPEKD V+W+++ISG+ N
Sbjct: 435 -DEAYLL-------DLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQN 486
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
+ ++E F EM +P++ TL SV+SA A A L QG +HA++ + + +V +
Sbjct: 487 DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILG 546
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+L+ +Y KCG V A +F + E+ I ++N++I G A NGL E +L++F MK +
Sbjct: 547 TTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVT 606
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
PN+ITF+ VL AC H+GLV+EG +F SM + I+P +HY CMVD+LGRAG L EA +
Sbjct: 607 PNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEE 666
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
L+N M P WGALLGA + H + ++ + + L+EL+PD +V+LS++Y+ GK
Sbjct: 667 LLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGK 726
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
D +R R+ K PGCS I +H FLAG K+ D+ IE
Sbjct: 727 WDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIE 774
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 220/415 (53%), Gaps = 45/415 (10%)
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
KMP K A Y++ + F L+ SM + ++ T +L +AC E
Sbjct: 178 KMPAK------ASRRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWE 231
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
QVH V + GFD D+ + N++I + M +A +VF+ S D+VSWNS+++GY+
Sbjct: 232 AKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIE 291
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
G +EEA ++ +MP + ++ +MI F +G + ++ +LF+ M EKD VTW+A+I+ F
Sbjct: 292 IGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACF 351
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
NE YEEA R F+ M + V +++ S LSA A +N G IH+ +K+ ES +
Sbjct: 352 QQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYI 411
Query: 367 SIQNSLVSLYSKCG------------------------------NVVD-AYRIFTNIDER 395
++QN+L+ +YSKCG N+VD A IF ++ E+
Sbjct: 412 NLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEK 471
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---F 452
++VS++SMISG+AQN L +E L LF++M+ G P++ T +SV+SAC + +E+G
Sbjct: 472 DVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVH 531
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
Y K N+ G ++D+ + G + A+++ M E W AL+
Sbjct: 532 AYIKRNGLTINVILG----TTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 581
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 166/411 (40%), Gaps = 114/411 (27%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
S S+N+++ I ++ EA I+ MP R+ ++ +MI F RG+ EA +L+ M
Sbjct: 279 SVSWNSILAGYIEIG-NVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEML 337
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAM----VEKD---------------VVAWG 106
+D V +ALI+ + + EEA R F M V D VV G
Sbjct: 338 E--KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 395
Query: 107 SMVDG--------------------YCKKGRVIEAREIFDK------------------- 127
++ Y K G ++ AR++FD+
Sbjct: 396 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 455
Query: 128 ------------MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
MPEK+VV+W++M+ GY + D F++ LF M+ G + TL +
Sbjct: 456 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVI 515
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
AC R +G VH + R G ++ILG ++I MY + G ++ A +VF M ++
Sbjct: 516 SACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIS 575
Query: 236 SWNSLISGYVHNGEIEEAYRLFERM------PGK-------------------------- 263
+WN+LI G NG +E + +F M P +
Sbjct: 576 TWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSM 635
Query: 264 --------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV-TWTAIISG 305
+ + M+ G L+++ EL N MP DV TW A++
Sbjct: 636 IHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGA 686
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 137/297 (46%), Gaps = 16/297 (5%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--VNMP 65
S+N+MI+ + N + A IF +MP ++ VS+++MI+G+ + +F E L+ + M
Sbjct: 444 SWNSMISGYLKCNL-VDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMS 502
Query: 66 ARWRDSVCSNALISGYLKVGRCEEA----ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
D ++IS ++ E+ A I + +V+ +++D Y K G V A
Sbjct: 503 GFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETA 562
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
E+F M EK + W A++ G E D+F +M++ + N IT + AC
Sbjct: 563 LEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHM 622
Query: 182 FRYREGV-QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNS 239
EG + ++ ++ ++ + GR G + EA ++ + M D +W +
Sbjct: 623 GLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGA 682
Query: 240 LISGYVHNGEIEEAYR----LFERMPGKDFVSWTTMITG-FSSKGNLEKSIELFNMM 291
L+ +G+ E R L E P D + +++ ++SKG + +E+ MM
Sbjct: 683 LLGACKKHGDSEMGRRVGRKLIELQPDHD--GFHVLLSNIYASKGKWDDVLEIRGMM 737
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/600 (33%), Positives = 336/600 (56%), Gaps = 51/600 (8%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN + Y K R A R+F+ + +V ++ +++ Y K+ V A ++FD+MP+ +
Sbjct: 46 SNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDS 105
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV--QVH 191
V++ ++ Y + + F LFL MR + + TL+ + ACG G+ Q+H
Sbjct: 106 VSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACG----INVGLIRQLH 161
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDAVSWNSLISGYVHNGEI 250
L G D + +GN++IT Y + GF+ EA ++F +S+ RD VSWNS++ Y+ + E
Sbjct: 162 ALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREG 221
Query: 251 EEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIE-------------------- 286
+A L+ M + D + +++T F++ +L ++
Sbjct: 222 SKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGL 281
Query: 287 ----------------LFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEMLRKDVRP 329
+F+ + D V W +ISG+ E +EA F ++ RP
Sbjct: 282 IDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRP 341
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRI 388
+ +L V+SA + ++ +QG Q+H +K+++ S+ +S+ N+L+++YSKCGN+ DA +
Sbjct: 342 DDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTL 401
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + E N VSYNSMI+G+AQ+G+G ++L+LF++M + P ITF+SVL+AC H G V
Sbjct: 402 FDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRV 461
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
E+G IYF MK + IEP H++CM+D+LGRAG L+EA LI ++ F+P W ALLG
Sbjct: 462 EDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLG 521
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R H N++LA AA L++L+P +A PYV+L+++YS G+ +D VR + + ++K
Sbjct: 522 ACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKK 581
Query: 569 PGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPK--HDWSLLGLERDW 626
PGCSWI + ++H+F+A +K+I+ L+ + + K+ + S+ G +R W
Sbjct: 582 PGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVW 641
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 194/434 (44%), Gaps = 51/434 (11%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+N +I+A + + A ++F MP ++VSY +I + RRG A +L++ M
Sbjct: 76 SFNTLISAYAKES-YVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134
Query: 68 WRDS---VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG-SMVDGYCKKGRVIEARE 123
+ D S + + + VG + + V+ G +++ Y K G + EAR
Sbjct: 135 FLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARR 194
Query: 124 IFDKMPE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
IF + E ++ V+W +MV YM+ +L+L M G+ + TL + A
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQ 254
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL-GFMDEANKVFSMMSKRDAVSWNSLI 241
G+Q H + + G+ + +G+ +I +Y + G M + KVF +S D V WN++I
Sbjct: 255 DLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMI 314
Query: 242 SGY-VHNGEIEEAYRLFERMPG----KDFVSWTTMITG---------------------- 274
SGY ++ +EA F ++ G D S +I+
Sbjct: 315 SGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDI 374
Query: 275 --------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
+S GNL + LF+ MPE + V++ ++I+G+ + ++ F
Sbjct: 375 PSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQ 434
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN--MESDVSIQNSLVSLYSK 378
ML D P +T SVL+A A T + G +I+ +++K +E + + ++ L +
Sbjct: 435 RMLEMDFTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDLLGR 493
Query: 379 CGNVVDAYRIFTNI 392
G + +A R+ I
Sbjct: 494 AGKLSEAERLIETI 507
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 34/262 (12%)
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R G +H L + L N + +Y + + A +VF + S+N+LIS Y
Sbjct: 25 RTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAY 84
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
+E A++LF+ MP D VS+ T+I ++ +G+ + + +LF M E
Sbjct: 85 AKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA---------- 134
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
F++M + TLS +++A L + Q+HA V ++S
Sbjct: 135 --------------FLDM-------DGFTLSGIITACGINVGLIR--QLHALSVVTGLDS 171
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALNLFRKM 423
VS+ N+L++ YSK G + +A RIF + E R+ VS+NSM+ + Q+ G +AL L+ +M
Sbjct: 172 YVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEM 231
Query: 424 KDEGLVPNQITFLSVLSACNHV 445
GL+ + T SVL+A +V
Sbjct: 232 TVRGLIVDIFTLASVLTAFTNV 253
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L A L G +HA +K + + + N + LYSKC + A R+F + + N+
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
S+N++IS +A+ E A LF DE P+ +++ ++++A G + F F
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLF----DEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 458 MKTLY 462
M+ +
Sbjct: 131 MREAF 135
>gi|358346115|ref|XP_003637117.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503052|gb|AES84255.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 592
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 306/555 (55%), Gaps = 50/555 (9%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N I+ LI + A +F + RN V++ +MITG+V+R +A +L+ MP R
Sbjct: 42 NKKISHLIRTG-RLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLR-- 98
Query: 70 DSVCSNALISGYLKVGR---CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
D V N +ISGY EE ++F+ M ++D V+W +++ GY K GR+ +A EIF+
Sbjct: 99 DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 158
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM----------------RRGGM------ 164
MPE+NVV+ A+V+G++ + F M R G +
Sbjct: 159 SMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEI 218
Query: 165 ----------------AFNSITLTI----LFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
A+N++ + E F Q G + +++
Sbjct: 219 LVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVV 278
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
NS++ Y + G + A ++F M +RDA SWN++I GYV G++EEA +LF MP D
Sbjct: 279 SWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPD 338
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+SW ++I+GFS G+L++ E F MP K+ ++W ++I+G+ NE Y+ A F +M
Sbjct: 339 VLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQL 398
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
K RP++ TLSS+LS S L G QIH V K + D+ I NSL+++YS+CG + D
Sbjct: 399 KGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTK-TVVPDLPINNSLITMYSRCGEIGD 457
Query: 385 AYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A +F + ++++++N+MI G+A +G +AL LF +MK + P ITF+SVL+AC
Sbjct: 458 ARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACA 517
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H GLVEEG F SM Y IEP EH+A +VDILGR G L EA+DLI +M +P VW
Sbjct: 518 HAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVW 577
Query: 504 GALLGAGRTHLNLDL 518
GALLGA R H N+DL
Sbjct: 578 GALLGACRVHSNVDL 592
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 206/650 (31%), Positives = 336/650 (51%), Gaps = 74/650 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M + S+N++ITA + N +YEA ++ M + N V+++A+I GF E
Sbjct: 195 MTQKDCVSWNSIITACVANGV-VYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVE 253
Query: 57 AEELYVNM----------------PA----RW-----------------RDSVCSNALIS 79
+ EL+ M PA +W + +NAL+
Sbjct: 254 SVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVG 313
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV----VA 135
Y + G + A +IF K ++ +M+ GY + G V +A+E+F +M ++ V ++
Sbjct: 314 MYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRIS 373
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W M+ G++ F+D LF + G+ +S TL + R+G ++H +
Sbjct: 374 WNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAI 433
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
G + +G +++ MY + + A F +S+RD +WN+LISGY +I +
Sbjct: 434 VKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRE 493
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
L ERM F E + TW +I++G V N+QY+ A
Sbjct: 494 LVERMKSDGF---------------------------EPNVYTWNSILAGLVENKQYDLA 526
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+ F EM +RP+ T+ +L+A + AT+++G Q+HA+ ++ +SD I +LV +
Sbjct: 527 MQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDM 586
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y+KCG++ Y+++ I N+V +N+M++ +A +G GEE + +FR+M D + P+ +TF
Sbjct: 587 YAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTF 646
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
LSVLS+C H G ++ G+ F M+T YNI P +HY CMVD+L RAG L EA LI +M
Sbjct: 647 LSVLSSCVHAGSIKIGYECFYLMET-YNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMP 705
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNR 555
E W ALLG H + L ++AA+ L+ELEP + YV+L++LY+ G+ D +
Sbjct: 706 MEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAK 765
Query: 556 VRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
R K ++KSPGCSWI +D VH+FLA KS ++EI L ++K
Sbjct: 766 TRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFMLDNLTK 815
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 226/473 (47%), Gaps = 75/473 (15%)
Query: 20 NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA----EELYVNMPARWRD----- 70
N S +A+ +F M ++N S+ A++ + G+FY+ EE + D
Sbjct: 79 NSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFP 138
Query: 71 ---SVCS---------------------------NALISGYLKVGRCEEAARIFEAMVEK 100
++C NALI Y K G +EA ++ E M +K
Sbjct: 139 VVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQK 198
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKM----PEKNVVAWTAMVDGYMKVDCFEDGFDLF 156
D V+W S++ G V EA ++ + M E NVV W+A++ G+ + +LF
Sbjct: 199 DCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELF 258
Query: 157 LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
M G+A ++ TL + AC R G ++HG + R + + N+++ MY R
Sbjct: 259 ARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRC 318
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFS 276
G M A K+FS +++ A S+N++I GY+ NG + +A LF +M
Sbjct: 319 GDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQME--------------- 363
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
++ +E +D ++W +ISG V+N +++A F ++L + + P+ TL S
Sbjct: 364 -----QEGVE-------RDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGS 411
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L+ A + QG +IH+ + ++S+ + +LV +Y KC +++ A F I ER+
Sbjct: 412 ILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERD 471
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
++N++ISG+A+ + L +MK +G PN T+ S+L+ GLVE
Sbjct: 472 TSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILA-----GLVE 519
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 153/356 (42%), Gaps = 77/356 (21%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G Q+H + GF + ++ MY ++A +F M+ ++ SW +++ +++
Sbjct: 50 GKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLN 109
Query: 247 NGEIEEAYRLFERM------PGKDFVSWTTMIT---------------------GFSSK- 278
G + + LFE DF + ++ GF +
Sbjct: 110 MGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNV 169
Query: 279 -------------GNLEKSIELFNMMPEKDDVTW-------------------------- 299
G+L+++ ++ M +KD V+W
Sbjct: 170 YVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLS 229
Query: 300 ---------TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+A+I GF +N E+ F M+ V P+ TL+SVL A + L G
Sbjct: 230 ELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVG 289
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
++H ++V+ + S+ + N+LV +Y +CG++ A++IF+ + SYN+MI G+ +N
Sbjct: 290 KELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLEN 349
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
G +A LF +M+ EG+ ++I++ ++S + ++ + F+ + + IEP
Sbjct: 350 GNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDL-LMEGIEP 404
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 10/207 (4%)
Query: 236 SWNSLISG-YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
S NSL G +H+ I+ + +FV T ++ +S + E + +F+ M K
Sbjct: 43 SSNSLTLGKQLHSHSIKTGFY------NHNFVQ-TKLLQMYSINSSFEDAWHMFDKMTLK 95
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV--RPNQLTLSSVLSASAATATLNQGSQ 352
+ +WTA++ +N + + F F E L + + + VL+ L G Q
Sbjct: 96 NLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQ 155
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H V+K ++V + N+L+ +Y KCG++ +A ++ + +++ VS+NS+I+ NG+
Sbjct: 156 VHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGV 215
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVL 439
EAL+L M L PN +T+ +V+
Sbjct: 216 VYEALDLLENMLLSELEPNVVTWSAVI 242
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 19/212 (8%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S++L +S +L G Q+H+H +K + +Q L+ +YS + DA+ +F +
Sbjct: 36 TYSTILQSSN---SLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKM 92
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP--NQITFLSVLSACNHVGLVEE 450
+N+ S+ +++ GL + LF + +GL + F VL+ C +G +E
Sbjct: 93 TLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLEL 152
Query: 451 GF-IYFKSMKT--LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
G ++ +K + N+ G ++D+ G+ GSL EA ++ MT + W +++
Sbjct: 153 GRQVHGMVLKHGFVTNVYVG----NALIDMYGKCGSLDEAKKVLEGMT-QKDCVSWNSII 207
Query: 508 GA----GRTHLNLDLAKLAAQHLMELEPDSAT 535
A G + LDL L L ELEP+ T
Sbjct: 208 TACVANGVVYEALDL--LENMLLSELEPNVVT 237
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 299/528 (56%), Gaps = 31/528 (5%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
DSV N++++GY+++G EEA I+ M E+ ++A SM+ + +G V+EA ++FD+M
Sbjct: 143 DSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEML 202
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
EK++V W+A++ + + + +E+ F+ M + G+ + + AC G
Sbjct: 203 EKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKL 262
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H L + G + I L N++I MY + G + A K+F
Sbjct: 263 IHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLF----------------------- 299
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+EAY L D +SW +MI+G+ ++ + +F+ MPEKD V+W+++ISG+ N
Sbjct: 300 -DEAYLL-------DLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQN 351
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
+ ++E F EM +P++ TL SV+SA A A L QG +HA++ + + +V +
Sbjct: 352 DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILG 411
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+L+ +Y KCG V A +F + E+ I ++N++I G A NGL E +L++F MK +
Sbjct: 412 TTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVT 471
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
PN+ITF+ VL AC H+GLV+EG +F SM + I+P +HY CMVD+LGRAG L EA +
Sbjct: 472 PNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEE 531
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
L+N M P WGALLGA + H + ++ + + L+EL+PD +V+LS++Y+ GK
Sbjct: 532 LLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGK 591
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
D +R R+ K PGCS I +H FLAG K+ D+ IE
Sbjct: 592 WDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIE 639
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 224/421 (53%), Gaps = 39/421 (9%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
R IF+ + N W M+ Y++ + F L+ SM + ++ T +L +AC
Sbjct: 31 TRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSI 90
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
E QVH V + GFD D+ + N++I + M +A +VF+ S D+VSWNS+
Sbjct: 91 RRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSI 150
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
++GY+ G +EEA ++ +MP + ++ +MI F +G + ++ +LF+ M EKD VTW+
Sbjct: 151 LAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWS 210
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+I+ F NE YEEA R F+ M + V +++ S LSA A +N G IH+ +K+
Sbjct: 211 ALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKI 270
Query: 361 NMESDVSIQNSLVSLYSKCG------------------------------NVVD-AYRIF 389
ES +++QN+L+ +YSKCG N+VD A IF
Sbjct: 271 GTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIF 330
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
++ E+++VS++SMISG+AQN L +E L LF++M+ G P++ T +SV+SAC + +E
Sbjct: 331 DSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALE 390
Query: 450 EG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
+G Y K N+ G ++D+ + G + A+++ M E W AL
Sbjct: 391 QGKWVHAYIKRNGLTINVILGTT----LIDMYMKCGCVETALEVFYGM-IEKGISTWNAL 445
Query: 507 L 507
+
Sbjct: 446 I 446
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+++ + +FN + + W +I ++ AF + ML + + T ++
Sbjct: 27 HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQ 86
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A + + + Q+H HV+K+ +SDV ++N+L++ +S C N+ DA R+F + VS
Sbjct: 87 ACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVS 146
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
+NS+++G+ + G EEA +++ +M + ++ + S++ GLV E F M
Sbjct: 147 WNSILAGYIEIGNVEEAKHIYHQMPERSIIASN----SMIVLFGMRGLVVEACKLFDEM 201
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/648 (32%), Positives = 334/648 (51%), Gaps = 49/648 (7%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
D +SA N +I L + + A +F M ++ VS+ M+ G+ G F E EL+
Sbjct: 260 DFSSAVSNGLID-LYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFD 318
Query: 63 NMP---ARWRDSVCSNALISGY----LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
M R +A ++ L+ G+ E + ++ D++ ++ Y K
Sbjct: 319 KMKLGNVRINKVSAVSAFLAAAETIDLEKGK-EIHGCALQQRIDSDILVATPLMVMYAKC 377
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G +A+++F + +++VAW+A++ ++ E+ LF M+ M N +TL +
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSIL 437
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
AC + G +H + D D+ G ++++MY + GF A F+ MS RD V
Sbjct: 438 PACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIV 497
Query: 236 SWNSLISGYVHNGEIEEAYRLFERM----------------PG----------------- 262
+WNSLI+GY G+ A +F ++ P
Sbjct: 498 TWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI 557
Query: 263 ------KDFVSWTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISGFVNNEQYEEA 315
D +I ++ G+L + LFN KD+VTW II+ ++ N +EA
Sbjct: 558 VKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA 617
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F +M ++ PN +T SVL A+A A +G HA +++M S+ + NSL+ +
Sbjct: 618 ISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDM 677
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y+KCG + + ++F +D ++ VS+N+M+SG+A +G G+ A+ LF M++ + + ++F
Sbjct: 678 YAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSF 737
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+SVLSAC H GLVEEG F SM Y+I+P EHYACMVD+LGRAG E + I M
Sbjct: 738 VSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMP 797
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNR 555
EP GVWGALLG+ R H N+ L ++A HL++LEP + +VVLS +Y+ G+ D +
Sbjct: 798 VEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGK 857
Query: 556 VRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
R K ++K+PGCSW+ LK+KVH F G KS L+ + + T+
Sbjct: 858 ARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTL 905
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 168/588 (28%), Positives = 273/588 (46%), Gaps = 65/588 (11%)
Query: 9 YNAMITALIN-----NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
++ IT LIN + C + A +F + P + + + +MI + R + EA E+Y
Sbjct: 62 HHHSITHLINLYSLFHKCDL--ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYC 119
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAM----------VEKDVVAWGSMVDGYC 113
M + + + LK C A + E + +E+DV +VD Y
Sbjct: 120 MVEKGLEP--DKYTFTFVLKA--CTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYS 175
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G + ARE+FDKMP+++VVAW AM+ G + + + D F SM+ G+ +S++L
Sbjct: 176 KMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLN 235
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
LF + +HG V F D+ + N +I +Y + G +D A +VF M +D
Sbjct: 236 LFPGICKLSNIELCRSIHGYV--FRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQD 293
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGK---- 263
VSW ++++GY HNG E LF++M GK
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHG 353
Query: 264 ---------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
D + T ++ ++ G EK+ +LF + +D V W+AII+ V EE
Sbjct: 354 CALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEE 413
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F EM + ++PN++TL S+L A A + L G IH VK +M+SD+S +LVS
Sbjct: 414 ALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVS 473
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+KCG A F + R+IV++NS+I+G+AQ G A+++F K++ + P+ T
Sbjct: 474 MYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGT 533
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ V+ AC + +++G + L E ++D+ + GSL A L N
Sbjct: 534 MVGVVPACALLNDLDQGTCIHGLIVKL-GFESDCHVKNALIDMYAKCGSLPSAEFLFNKT 592
Query: 495 TFEPPPGVWGALLGA--GRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
F W ++ A H ++ L P+S T VL
Sbjct: 593 DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 186/463 (40%), Gaps = 82/463 (17%)
Query: 14 TALIN--NNCSIYEA-FEIFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVN 63
TAL++ C + A F M R+ V++ ++I G+ + G MFY+ +N
Sbjct: 469 TALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAIN 528
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
A V + L G C I + E D +++D Y K G + A
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGL-IVKLGFESDCHVKNALIDMYAKCGSLPSAEF 587
Query: 124 IFDKMP-EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+F+K K+ V W ++ YM+ ++ F MR NS+T + A
Sbjct: 588 LFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLA 647
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+REG+ H + + GF + ++GNS+I MY + G +D + K+F+ M +D VSWN+++S
Sbjct: 648 AFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLS 707
Query: 243 GYV-----------------------------------HNGEIEEAYRLFERMPGK---- 263
GY H G +EE ++F M K
Sbjct: 708 GYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIK 767
Query: 264 -DFVSWTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISG---FVNNEQYEEAFRW 318
D + M+ G ++++ +MP E D W A++ N + E A
Sbjct: 768 PDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDH 827
Query: 319 FIEMLRKDVRPNQLTLSSVLSASA-------ATATLNQ--------------GSQIHAHV 357
+++ ++ + + LSS+ + S A + +N +++HA
Sbjct: 828 LVKLEPRN-PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFR 886
Query: 358 V----KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
V +ES + N+L+ K G V D + N++E +
Sbjct: 887 VGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEED 929
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 213/633 (33%), Positives = 327/633 (51%), Gaps = 56/633 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
SI +A +F M R+ S+ MI G + G EA L++ M R+ N ++ Y
Sbjct: 370 SIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQ---RNGCLPN--LTTY 424
Query: 82 LKVGRCEEAARIF-------------EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
L + A EA D+ +++ Y K G + +AR +FD M
Sbjct: 425 LSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM 484
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+++V++W AM+ G + C + F +FL M++ G+ +S T L G
Sbjct: 485 CDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVN 544
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+VH G D +G++ I MY R G +D+A +F +S R +WN++I G
Sbjct: 545 EVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQR 604
Query: 249 EIEEAYRLFERMPGKDFVSWTT-------------------------------------- 270
EA LF +M + F+ T
Sbjct: 605 CGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNA 664
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
++ +S GN++ + ++F+ M E++ TWT +I G + +AF F++MLR+ + P+
Sbjct: 665 LVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPD 724
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T S+LSA A+T L ++H H V + SD+ + N+LV +Y+KCG++ DA +F
Sbjct: 725 ATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFD 784
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
++ ER++ S+ MI G AQ+G G EAL+ F KMK EG PN ++++VL+AC+H GLV+E
Sbjct: 785 DMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDE 844
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G F SM Y IEP EHY CMVD+LGRAG L EA I +M EP WGALLGA
Sbjct: 845 GRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGAC 904
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
T+ NL++A+ AA+ ++L+P SA+ YV+LS++Y+ GK VR + K IRK PG
Sbjct: 905 VTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPG 964
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
SWI + +++H F+ G S + KEI L +
Sbjct: 965 RSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDL 997
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 209/389 (53%), Gaps = 41/389 (10%)
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
I ++ +E+++ ++ Y + GR+ AR++FDK+ +KN+ WT M+ GY + ED
Sbjct: 144 IIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDA 203
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
++ MR+ N IT + +AC + G ++H + + GF D+ + +++ M
Sbjct: 204 MRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNM 263
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV----SW 268
Y + G +++A +F M +R+ +SW +I G H G +EA+ LF +M + F+ ++
Sbjct: 264 YVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTY 323
Query: 269 TTMITGFSSKGNLE-------------------------------KSIE----LFNMMPE 293
+++ +S G LE SI+ +F+ M E
Sbjct: 324 VSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTE 383
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS--AATATLNQGS 351
+D +WT +I G + + +EAF F++M R PN T S+L+AS A+T+ L
Sbjct: 384 RDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVK 443
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
+H H + SD+ I N+L+ +Y+KCG++ DA +F + +R+++S+N+M+ G AQNG
Sbjct: 444 VVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNG 503
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLS 440
G EA +F +M+ EGLVP+ T+LS+L+
Sbjct: 504 CGHEAFTVFLQMQQEGLVPDSTTYLSLLN 532
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 150/572 (26%), Positives = 263/572 (45%), Gaps = 66/572 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALI 78
A ++F + +N + MI G+ G +A +Y M S+
Sbjct: 172 ARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCC 231
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
LK G+ + A I ++ + DV ++V+ Y K G + +A+ IFDKM E+NV++WT
Sbjct: 232 PVNLKWGK-KIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ G ++ F LFL M+R G NS T + A +VH G
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG 350
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
D+ +GN+++ MY + G +D+A VF M++RD SW +I G +G +EA+ LF
Sbjct: 351 LALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFL 410
Query: 259 RM---------------------PGKDFVSWTTMI------TGFSSK------------- 278
+M + W ++ GF S
Sbjct: 411 QMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAK 470
Query: 279 -GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
G+++ + +F+ M ++D ++W A++ G N EAF F++M ++ + P+ T S+
Sbjct: 471 CGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSL 530
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L+ +T L +++H H V+ + SD + ++ + +Y +CG++ DA +F + R++
Sbjct: 531 LNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHV 590
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
++N+MI G AQ G EAL+LF +M+ EG +P+ TF+++LSA + EE + K
Sbjct: 591 TTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSA----NVDEEALEWVKE 646
Query: 458 MKT------LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
+ + L ++ G +V + G++ A + + M E W ++G
Sbjct: 647 VHSHATDAGLVDLRVGN----ALVHTYSKCGNVKYAKQVFDDMV-ERNVTTWTMMIGGLA 701
Query: 512 TH-LNLDLAKLAAQHLME-LEPDSATPYVVLS 541
H D Q L E + PD+ T +LS
Sbjct: 702 QHGCGHDAFSHFLQMLREGIVPDATTYVSILS 733
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 198/417 (47%), Gaps = 49/417 (11%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV--IEAREIFDKMPEK 131
S+ LI G G + R+ EA V++ +V + + R+ + F K
Sbjct: 14 SSELIDGQCGRGVISSSFRMNEAQVQRILVGSTLLSGRQMRHSRLYFLSISGCFKSEKHK 73
Query: 132 NV----VAWTAMVDGYMK----VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+ V A VDG + V +D + + G+A +S + + + C +
Sbjct: 74 YLPSVLVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQED 133
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
QVH + + G + ++ + N ++ +Y R G + A +VF + K++ W ++I G
Sbjct: 134 ILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGG 193
Query: 244 YVHNGEIEEAYRLFERMP--------------------------GK-------------D 264
Y G E+A R++++M GK D
Sbjct: 194 YAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSD 253
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
T ++ + G++E + +F+ M E++ ++WT +I G + + +EAF F++M R
Sbjct: 254 VRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQR 313
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ PN T S+L+A+A+ L ++H+H V + D+ + N+LV +Y+K G++ D
Sbjct: 314 EGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDD 373
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
A +F + ER+I S+ MI G AQ+G G+EA +LF +M+ G +PN T+LS+L+A
Sbjct: 374 ARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNA 430
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 133/238 (55%), Gaps = 8/238 (3%)
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G L+ + ++F+ + +K+ WT +I G+ E+A R + +M ++ +PN++T S+L
Sbjct: 167 GRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSIL 226
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A L G +IHAH+++ +SDV ++ +LV++Y KCG++ DA IF + ERN++
Sbjct: 227 KACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVI 286
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE---EGFIYF 455
S+ MI G A G G+EA +LF +M+ EG +PN T++S+L+A G +E E +
Sbjct: 287 SWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHA 346
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+ ++ G +V + ++GS+ +A + + MT E W ++G H
Sbjct: 347 VNAGLALDLRVGN----ALVHMYAKSGSIDDARVVFDGMT-ERDIFSWTVMIGGLAQH 399
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 66/112 (58%), Gaps = 11/112 (9%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
Q+H ++K ME ++ + N L+ +Y +CG + A ++F + ++NI + +MI G+A+ G
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYG 198
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----------HVGLVEEGF 452
E+A+ ++ KM+ E PN+IT+LS+L AC H +++ GF
Sbjct: 199 HAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGF 250
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 287/473 (60%), Gaps = 1/473 (0%)
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
+ +M NV + AM+ G+++ +L++ M R ++ S T L +ACG +
Sbjct: 37 YTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQL 96
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R VHG V R GFD + + S++ Y +G ++E+ +VF M +RD +W +++SG
Sbjct: 97 RFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGL 156
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
V G++ A RLF+ MP ++ +W T+I G++ ++ + LFN MP +D ++WT +I+
Sbjct: 157 VRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMIN 216
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
+ N+++ EA F EM + + P+++T+++V+SA A L+ G +IH ++++
Sbjct: 217 CYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNL 276
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
DV I ++L+ +Y+KCG++ + +F + E+N+ +NS+I G A +G EEAL +F KM+
Sbjct: 277 DVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKME 336
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
E + PN +TF+SVLSACNH GL+EEG F SM ++I PG EHY CMVD+L +AG L
Sbjct: 337 REKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLL 396
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA+ LI +M EP +WGALL + H NL++A++AA LM LEP ++ Y +L ++
Sbjct: 397 EEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMN 456
Query: 545 SVIGKKRDGNRVRMKKKLKRIRK-SPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
+ + + + ++R+ K + + K PG SWI ++ +VH F A KS EI
Sbjct: 457 AEVNRWGEAAKIRLTMKEQGVEKRCPGSSWIEMESQVHQFAASDKSHAASDEI 509
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 169/405 (41%), Gaps = 110/405 (27%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
N I+AL N Y A + M + N Y AMI GFV+ +A ELYV M
Sbjct: 18 NQFISALSTFNRMDY-AVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANV 76
Query: 65 -PAR--------------------------WRDSVCSN-----ALISGYLKVGRCEEAAR 92
P WR+ S+ +L+ Y +GR EE+ R
Sbjct: 77 SPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVR 136
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK------- 145
+F+ M E+DV AW +MV G + G + A +FD MP++N+ W ++DGY +
Sbjct: 137 VFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVA 196
Query: 146 ------------------VDC------FEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
++C F + +F M + G++ + +T+ + AC
Sbjct: 197 ELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHL 256
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
G ++H + + GF+ D+ +G+++I MY + G +D + +F + +++ WNS+I
Sbjct: 257 GALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVI 316
Query: 242 SGYVHNGEIEEAYRLFERMP-------GKDFVS--------------------------- 267
G +G EEA +F++M G FVS
Sbjct: 317 EGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSI 376
Query: 268 ------WTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISG 305
+ M+ S G LE++++L M E + V W A++SG
Sbjct: 377 PPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSG 421
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 12/260 (4%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
I+ S+ ++ ++ + M + + A+I GFV + Q +A +++MLR +V P
Sbjct: 21 ISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVSPTS 80
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T S++ A + L +H HV + +S V +Q SLV YS G + ++ R+F
Sbjct: 81 YTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDE 140
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ ER++ ++ +M+SG + G A LF M D L T+ +++ + V+
Sbjct: 141 MPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLA----TWNTLIDGYARLREVDVA 196
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE--PPPGVWGALLGA 509
+ F M I + M++ + EA+ + N M P V A + +
Sbjct: 197 ELLFNQMPARDIIS-----WTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVIS 251
Query: 510 GRTHLN-LDLAKLAAQHLME 528
HL LDL K ++M+
Sbjct: 252 ACAHLGALDLGKEIHYYIMQ 271
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 50/287 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R ++ M++ L+ + A +F MP RN ++ +I G+ R AE L
Sbjct: 141 MPERDVFAWTTMVSGLVRVG-DMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELL 199
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK-------------------- 100
+ MPA RD + +I+ Y + R EA +F M +
Sbjct: 200 FNQMPA--RDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLG 257
Query: 101 -------------------DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
DV +++D Y K G + + +F K+ EKN+ W ++++
Sbjct: 258 ALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIE 317
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G E+ +F M R + N +T + AC EG + ++R D+
Sbjct: 318 GLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTR---DH 374
Query: 202 DIILG----NSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISG 243
I G ++ + + G ++EA ++ M + +AV W +L+SG
Sbjct: 375 SIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSG 421
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
++A +VK N D + N +S S + A +T ++ N+ YN+MI GF Q+
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+AL L+ +M + P TF S++ AC GLV +
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKAC---GLVSQ 95
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 296/528 (56%), Gaps = 32/528 (6%)
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
R+ AR++FD++P+ N+ W +M GY + + + + LF M+ + N T ++ +
Sbjct: 85 RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 144
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM------- 229
+CG+ EG QVH + + GF + +G ++I MY G + +A K+F M
Sbjct: 145 SCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVA 204
Query: 230 ------------------------SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
+RD V WN ++SGY+ G++ EA +LF MP +D
Sbjct: 205 WTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDV 264
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ W T++ G+++ GN+E LF MPE++ +W A+I G+ +N + E F ML +
Sbjct: 265 MFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSE 324
Query: 326 -DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
DV PN TL +VLSA A L+ G +H + ++ +V + N+L+ +Y+KCG + +
Sbjct: 325 SDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIEN 384
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A +F +D ++++S+N++I G A + G +ALNLF +MK+ G P+ ITF+ +L AC H
Sbjct: 385 AISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTH 444
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
+GLVE+GF YF+SM Y I P EHY CMVD+L RAG L +A+ + M E +W
Sbjct: 445 MGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWA 504
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LLGA R + N++LA+LA Q L+ELEP + YV+LS++Y G+ D R+++ +
Sbjct: 505 GLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTG 564
Query: 565 IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+K PGCS I + D V F + + ++EI L+ + K + F +
Sbjct: 565 FKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGY 612
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 54/364 (14%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
++ +A++IF M RN V++ +MI G++ A L+ P R D V N ++SGY
Sbjct: 186 TVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPER--DVVLWNIMVSGY 243
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
++ G EA ++F M +DV+ W +++ GY G V +F++MPE+N+ +W A++
Sbjct: 244 IEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIG 303
Query: 142 GYMKVDCFEDGFDLFLSMRR----GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
GY F F++ S +R + N TL + AC R G VH
Sbjct: 304 GYAHNGLF---FEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESS 360
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY------------- 244
G ++ +GN+++ MY + G ++ A VF M +D +SWN+LI G
Sbjct: 361 GLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLF 420
Query: 245 ----------------------VHNGEIEEAYRLFERMPGKDFV-----SWTTMITGFSS 277
H G +E+ + F+ M + + M+ +
Sbjct: 421 FQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLAR 480
Query: 278 KGNLEKSIELFNMMP-EKDDVTWTAIISG---FVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
G LE+++ MP E D V W ++ + N E E A + IE+ K+ N +
Sbjct: 481 AGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKN-PANYVM 539
Query: 334 LSSV 337
LS++
Sbjct: 540 LSNI 543
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 132/579 (22%), Positives = 218/579 (37%), Gaps = 160/579 (27%)
Query: 8 SYNAMITALINNNCSIYE----AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
YN IT + C+ + A ++F +P N + +M G+ + + E L+
Sbjct: 67 QYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQ 126
Query: 64 M------------PARWRDSVCSNALISG-------------------------YLKVGR 86
M P + NALI G Y G
Sbjct: 127 MKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGT 186
Query: 87 CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV 146
+A +IF M E++VVAW SM++GY ++ AR +FD PE++VV W MV GY+
Sbjct: 187 VGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYI-- 244
Query: 147 DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
+G D+ + + LF H + +R D++
Sbjct: 245 ----EGGDMVEARK-------------LF---------------HEMPNR-----DVMFW 267
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
N+++ Y G ++ +F M +R+ SWN+LI GY HNG E F+RM + V
Sbjct: 268 NTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDV 327
Query: 267 SW--TTMITGFSS----------------------KGN----------------LEKSIE 286
T++T S+ KGN +E +I
Sbjct: 328 PPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAIS 387
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+F M KD ++W +I G + + +A F +M +P+ +T +L A
Sbjct: 388 VFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGL 447
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
+ G ++ ++ D Y I I+ Y M+
Sbjct: 448 VEDG-------------------------FAYFQSMADDYLIMPQIEH-----YGCMVDM 477
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
A+ G E+A+ RKM E + + + +L AC VE + +++ L +EP
Sbjct: 478 LARAGRLEQAMAFVRKMPVEA---DGVIWAGLLGACRIYKNVELAEL---ALQRLIELEP 531
Query: 467 -GPEHYACMVDILGRAGSLAEAIDLINSMT---FEPPPG 501
P +Y + +I G AG + L +M F+ PG
Sbjct: 532 KNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPG 570
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 160/373 (42%), Gaps = 63/373 (16%)
Query: 189 QVHGLVSRF---GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
QVH + ++ GF Y+ + ++T+ L M A ++F + + WNS+ GY
Sbjct: 53 QVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYA 112
Query: 246 HNGEIEEAYRLFERMPGKD----------------------------------------F 265
+ E LF +M G D F
Sbjct: 113 QSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPF 172
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
V TT+I +S+ G + + ++F M E++ V WT++I+G++ + A R F +
Sbjct: 173 VG-TTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPER 231
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES-DVSIQNSLVSLYSKCGNVVD 384
DV VL + + G + A + M + DV N+++ Y+ GNV
Sbjct: 232 DV---------VLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEA 282
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACN 443
+F + ERNI S+N++I G+A NGL E L F++M E V PN T ++VLSAC
Sbjct: 283 LEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACA 342
Query: 444 HVGLVEEG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
+G ++ G +Y +S N+ G ++D+ + G + AI + M +
Sbjct: 343 RLGALDLGKWVHVYAESSGLKGNVYVG----NALMDMYAKCGIIENAISVFRGMDTKDLI 398
Query: 501 GVWGALLGAGRTH 513
W L+G H
Sbjct: 399 S-WNTLIGGLAMH 410
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P++L +S + T Q QI A ++ + + I LV++ + + A ++
Sbjct: 33 PHRLLEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQL 92
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV-GL 447
F I + NI +NSM G+AQ+ E + LF +MK + PN TF VL +C + L
Sbjct: 93 FDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINAL 152
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+E ++ +K P ++D+ G++ +A + M FE W +++
Sbjct: 153 IEGEQVHCFLIKC--GFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMI 209
Query: 508 GAGRTHLNLDLAKLAAQHLMELEPD 532
L+ DL ++A+ L +L P+
Sbjct: 210 NG--YILSADL--VSARRLFDLAPE 230
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 205/631 (32%), Positives = 339/631 (53%), Gaps = 43/631 (6%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNALIS 79
S+ + ++F MP RN V++ +++TG+++ G + EL+ M A W +SV +++S
Sbjct: 154 SVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLS 213
Query: 80 GYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G + R+ V+ V S+++ Y K G V EAR +F M +++V+
Sbjct: 214 VVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVS 273
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W ++ G + + LF R T + + C + Q+H V
Sbjct: 274 WNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVL 333
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAY 254
+ GF + +++ Y + G + A +F +MS ++ VSW ++I+G + NG++ A
Sbjct: 334 KRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAA 393
Query: 255 RLFERM-----PGKDF------------------------------VSWTTMITGFSSKG 279
LF RM DF + T ++ +S
Sbjct: 394 ALFSRMREDGVAPNDFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLC 453
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
N E+++ +F M+ +KD V+W+A+++ + + A FI+M ++PN+ T+SSV+
Sbjct: 454 NTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVID 513
Query: 340 ASAA-TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A A+ TA ++ G Q HA +K + + ++LVS+Y++ G++ A IF +R++V
Sbjct: 514 ACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLV 573
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+NSM+SG+AQ+G ++AL++FR+M+ EG+ + +TFLSV+ C H GLVEEG YF SM
Sbjct: 574 SWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSM 633
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
Y I P EHYACMVD+ RAG L EA+ LI M+F P VW LLGA + H N++L
Sbjct: 634 ARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVEL 693
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
KLAA+ L+ LEP + YV+LS++YS GK ++ + VR K+++K GCSWI +K+
Sbjct: 694 GKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKN 753
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
KVH F+A KS ++I L+ ++ K+
Sbjct: 754 KVHSFIASDKSHPLSEQIYAKLRAMTTKLKQ 784
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 227/466 (48%), Gaps = 56/466 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV- 84
A + F +P RN + +A + RRG ++A + ++++ V AL+ G LKV
Sbjct: 57 ARQAFDEIPHRNTLDHA--LFDHARRGSVHQALDHFLDVHRCHGGRVGGGALV-GVLKVC 113
Query: 85 --------GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
G+ I DV S+VD Y K V++ R++F+ MP++NVV W
Sbjct: 114 GSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTW 173
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
T+++ GY++ D +LF MR G+ NS+T + G +VH +
Sbjct: 174 TSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVK 233
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
FG + + NS++ MY + G ++EA VF M RD VSWN+L++G V NG EA +L
Sbjct: 234 FGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQL 293
Query: 257 FE-----------------------------------RMPGKDFVSW----TTMITGFSS 277
F + + F S+ T ++ +S
Sbjct: 294 FHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSK 353
Query: 278 KGNLEKSIELFNMMP-EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G L ++++F +M ++ V+WTA+I+G + N A F M V PN T S+
Sbjct: 354 AGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYST 413
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L+AS A+ QIHA V+K N E + +L++ YSK N +A IF ID+++
Sbjct: 414 ILTASVASLP----PQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKD 469
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+VS+++M++ +AQ G + A N+F KM GL PN+ T SV+ AC
Sbjct: 470 VVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDAC 515
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 148/307 (48%), Gaps = 17/307 (5%)
Query: 8 SYNAMITALIN---NNCSIYEAFEIFATMP-MRNAVSYAAMITGFVRRGMFYEAEELYVN 63
SY ++TAL++ + A +IF M +N VS+ AMI G ++ G A L+
Sbjct: 339 SYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSR 398
Query: 64 MPARWRDSVCSN-----ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
M D V N +++ + + A++ + E + +++ Y K
Sbjct: 399 MR---EDGVAPNDFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNT 455
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EA IF + +K+VV+W+AM+ Y + + ++F+ M G+ N T++ + +AC
Sbjct: 456 EEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDAC 515
Query: 179 GRFFRYRE-GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
+ G Q H + + + + +++++MY R G ++ A +F + RD VSW
Sbjct: 516 ASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSW 575
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
NS++SGY +G ++A +F +M + D V++ ++I G + G +E+ F+ M
Sbjct: 576 NSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMAR 635
Query: 294 KDDVTWT 300
+T T
Sbjct: 636 DYGITPT 642
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 350 GSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G Q+H ++ + DV + SLV +Y K +VVD ++F + +RN+V++ S+++G+
Sbjct: 122 GKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYI 181
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMK 459
Q+G + + LF +M+ EG+ PN +TF SVLS G+V+ G ++ +S+K
Sbjct: 182 QDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVK 233
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/614 (33%), Positives = 319/614 (51%), Gaps = 88/614 (14%)
Query: 26 AFEIFATMP--MRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD---------SVCS 74
A EIF P MR+ V Y AMITG+ + A EL+ M RW + SV S
Sbjct: 98 AREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAM--RWANFQPDDFTFASVLS 155
Query: 75 -------------------------------NALISGYLKVGR---------CEEAARIF 94
NAL+S Y+K A ++F
Sbjct: 156 ASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLF 215
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
+ M +++ W +++ GY + G + AREI D M E+ +AW AM+ GY+ FED
Sbjct: 216 DEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALT 275
Query: 155 LFLSMRRGGMAFNSITLTILFEAC--GRFFRYREGVQVHGLVSRFGFDYDIIL--GNSII 210
LF MR G+ + T T + AC G FF + V + L + D D +L GN++I
Sbjct: 276 LFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLI 335
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTT 270
T+Y + G +++ A ++F MP KD ++W T
Sbjct: 336 TLYWKYG-------------------------------KVDGARKIFYEMPVKDIITWNT 364
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+++G+ + G +E++ F MPEK+ +TWT +ISG N E+A + F +M PN
Sbjct: 365 LLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPN 424
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ ++A + L G Q+HA +V + +S +S+ N+++++Y++CG V A +F
Sbjct: 425 DYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFL 484
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ + VS+NSMI+ Q+G G +A+ L+ +M EG++P++ TFL+VLSAC+H GLVEE
Sbjct: 485 TMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEE 544
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G YF SM Y I PG +HYA M+D+ RAG ++A ++I+SM FE +W ALL
Sbjct: 545 GNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGC 604
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
RTH N+DL AA+ L +L P YV+LS++Y+ +G+ D R R + + ++K P
Sbjct: 605 RTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPA 664
Query: 571 CSWIILKDKVHLFL 584
CSW +++KVH+FL
Sbjct: 665 CSWTEVENKVHVFL 678
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 242/500 (48%), Gaps = 23/500 (4%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKN 132
N LI Y K A ++F+ + + DV+A +++ Y G + AREIF++ P ++
Sbjct: 52 NRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRD 111
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL-TILFEACGRFFRYREGVQVH 191
V + AM+ GY ++ +LF +MR + T ++L + F+ R+ Q+H
Sbjct: 112 TVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMH 171
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLG---------FMDEANKVFSMMSKRDAVSWNSLIS 242
G V +FG + + N+++++Y + M A K+F M KR+ W +LI+
Sbjct: 172 GTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLIT 231
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVT 298
GYV NG++ A + + M + ++W MI+G+ G E ++ LF M + D+ T
Sbjct: 232 GYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDEST 291
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
+T++IS + + + +L+ ++ P++ L SV + T G A +
Sbjct: 292 YTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSV-GNTLITLYWKYGKVDGARKI 350
Query: 359 KMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
M D+ N+L+S Y G + +A F + E+N++++ MISG AQNG GE+AL
Sbjct: 351 FYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQAL 410
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
LF +MK +G PN F ++AC+ +G +E G + L + A M+ +
Sbjct: 411 KLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNA-MITM 469
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGA-GRTHLNLDLAKLAAQHLME-LEPDSAT 535
R G + A + +M F P W +++ A G+ + +L Q L E + PD T
Sbjct: 470 YARCGIVEAARTMFLTMPFVDPVS-WNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRT 528
Query: 536 PYVVLSDLYSVIGKKRDGNR 555
VLS S G +GNR
Sbjct: 529 FLTVLSAC-SHAGLVEEGNR 547
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 74/302 (24%)
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
Y VHG V GF + N +I +Y + A K+F + + D ++ +LI+
Sbjct: 29 YSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITA 88
Query: 244 YVHNGEIEEAYRLFERMP--GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
Y G ++ A +F P +D V + MITG+S + +IELF
Sbjct: 89 YSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELF------------- 135
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT-ATLNQGSQIHAHVVKM 360
A RW + +P+ T +SVLSAS Q Q+H VVK
Sbjct: 136 ------------RAMRW------ANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKF 177
Query: 361 NMESDVSIQNSLVSLYSKC----------------------------------------G 380
+E ++ N+L+S+Y KC G
Sbjct: 178 GIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNG 237
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
++ A I + E+ +++N+MISG+ +GL E+AL LFRKM+ G+ ++ T+ SV+S
Sbjct: 238 DLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVIS 297
Query: 441 AC 442
AC
Sbjct: 298 AC 299
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 21/273 (7%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
++N +++ +N + EA FA MP +N +++ MI+G + G +A +L+ M
Sbjct: 361 TWNTLLSGYVNAG-RMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLD 419
Query: 68 WRD----------SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
+ + CS + G L+ GR + A+I + + +M+ Y + G
Sbjct: 420 GYEPNDYAFAGAITACS---VLGALENGR-QLHAQIVHLGHDSTLSVGNAMITMYARCGI 475
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
V AR +F MP + V+W +M+ + +L+ M + G+ + T + A
Sbjct: 476 VEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSA 535
Query: 178 CGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLG-FMDEANKVFSMMSKRDAV 235
C EG + + ++ +G +I ++ R G F D N + SM + A
Sbjct: 536 CSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAP 595
Query: 236 SWNSLISGYVHNGE----IEEAYRLFERMPGKD 264
W +L++G +G IE A +LF+ +P D
Sbjct: 596 IWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHD 628
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 306/543 (56%), Gaps = 39/543 (7%)
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
I ++ +E++ +++ Y + GR+ EAR +FD + +K+ +W AM+ GY++ ED
Sbjct: 54 IIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDA 113
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
LF M G+ N+ T I+ +AC + G +VH + G + D+ +G +++ M
Sbjct: 114 MRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRM 173
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF------- 265
YG+ G ++EA ++F + D +SW +I Y +G +EAYRL +M + F
Sbjct: 174 YGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITY 233
Query: 266 ------------VSW--------------------TTMITGFSSKGNLEKSIELFNMMPE 293
+ W T ++ ++ G+++ + +F+ M
Sbjct: 234 VSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKV 293
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+D V+W +I F + + EA+ F++M + +P+ + S+L+A A+ L +I
Sbjct: 294 RDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKI 353
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H H + +E DV + +LV +YSK G++ DA +F + RN+VS+N+MISG AQ+GLG
Sbjct: 354 HRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLG 413
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
++AL +FR+M G+ P+++TF++VLSAC+H GLV+EG + +M +Y IEP H C
Sbjct: 414 QDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNC 473
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDS 533
MVD+LGRAG L EA I++M +P WGALLG+ RT+ N++L +L A+ ++L+P +
Sbjct: 474 MVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKN 533
Query: 534 ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDL 593
A YV+LS++Y+ GK + VR + + IRK PG SWI + +K+H FL S +
Sbjct: 534 AATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPEC 593
Query: 594 KEI 596
KEI
Sbjct: 594 KEI 596
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 161/326 (49%), Gaps = 39/326 (11%)
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G+ +S + + C + QVH + + + + + N+++ +Y G + EA
Sbjct: 23 GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEA 82
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--------------------- 261
VF + K+ SWN++I+GYV + E+A RLF M
Sbjct: 83 RCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASL 142
Query: 262 -----GK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
GK D T ++ + G++ ++ +F+ + D ++WT +I
Sbjct: 143 SALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMI 202
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
+ + +EA+R ++M ++ +PN +T S+L+A A+ L ++H H + +E
Sbjct: 203 GAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLE 262
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
DV + +LV +Y+K G++ DA +F + R++VS+N MI FA++G G EA +LF +M
Sbjct: 263 LDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQM 322
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVE 449
+ EG P+ I FLS+L+AC G +E
Sbjct: 323 QTEGCKPDAIMFLSILNACASAGALE 348
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 186/417 (44%), Gaps = 48/417 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNA 76
+ EA +F + ++ S+ AMI G+V +A L+ M P + A
Sbjct: 79 LQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKA 138
Query: 77 LIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
S LK G+ E A I +E DV +++ Y K G + EAR IFD + ++++
Sbjct: 139 CASLSALKWGK-EVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIIS 197
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT M+ Y + ++ + L L M + G N+IT + AC + +VH
Sbjct: 198 WTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHAL 257
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
G + D+ +G +++ MY + G +D+A VF M RD VSWN +I + +G EAY
Sbjct: 258 DAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYD 317
Query: 256 LFERMPGK---------------------------------------DFVSWTTMITGFS 276
LF +M + D T ++ +S
Sbjct: 318 LFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYS 377
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G+++ + +F+ M ++ V+W A+ISG + ++A F M V+P+++T +
Sbjct: 378 KSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVA 437
Query: 337 VLSASAATATLNQG-SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
VLSA + +++G SQ A +E DVS N +V L + G +++A N+
Sbjct: 438 VLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNM 494
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 110/226 (48%), Gaps = 5/226 (2%)
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EA + L++ + + VL L Q+H ++K ME + + N+L+
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y +CG + +A +F + +++ S+N+MI+G+ ++ E+A+ LFR+M EG+ PN
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
T++ +L AC + ++ G ++ +E ++ + G+ GS+ EA + ++
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRH-GGLESDVRVGTALLRMYGKCGSINEARRIFDN 189
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
+ W ++GA N K A + ++++E + P +
Sbjct: 190 LMNHDIIS-WTVMIGAYAQSGN---GKEAYRLMLQMEQEGFKPNAI 231
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW-- 68
TAL++ + SI +A +F M +RN VS+ AMI+G + G+ +A E++ M A
Sbjct: 370 TALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVK 429
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEARE 123
D V A++S G +E + AM +E DV MVD + GR++EA+
Sbjct: 430 PDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKL 489
Query: 124 IFDKMP-EKNVVAWTAMV 140
D M + + W A++
Sbjct: 490 FIDNMAVDPDEATWGALL 507
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 192/548 (35%), Positives = 299/548 (54%), Gaps = 39/548 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D+ ++V Y K RV AR++FD M E++ V W MV G +K CF++ +F M
Sbjct: 140 DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMV 199
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+GG+ F+S T+ + G+ + L + GF + + +Y + G ++
Sbjct: 200 KGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIE 259
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-------ERMPGKDFVSW----- 268
A +F + + D VS+N++ISGY N E E + RLF E++ V
Sbjct: 260 TARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFF 319
Query: 269 -------TTMITGFSSK--------------------GNLEKSIELFNMMPEKDDVTWTA 301
T I GF +K +E + LF+ EK +W A
Sbjct: 320 PFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNA 379
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+ISG+ N E+A F EM + +VRPN +T++S+LSA A L+ G +H + + +
Sbjct: 380 MISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRES 439
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
ES++ + +L+ +Y+KCG++ +A R+F+ + E+N V++N+MISG+ +G G EALNLF
Sbjct: 440 FESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFN 499
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
+M + P +TFLSVL AC+H GLV EG F+SM + EP PEHYACMVD+LGRA
Sbjct: 500 EMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRA 559
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G+L +A+D I M EP P VWGALLGA H + +LA+LA+ L EL+P + YV+LS
Sbjct: 560 GNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLS 619
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
++YS + VR K +++ K+PGC+ I + + +H+F +G +S I L+
Sbjct: 620 NIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLE 679
Query: 602 TISKGTKE 609
++ +E
Sbjct: 680 KLTGKMRE 687
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 166/401 (41%), Gaps = 83/401 (20%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R + +N M++ L+ N+C EA IF M ++ + + + V G+ E ++L
Sbjct: 167 MLERDTVLWNTMVSGLVKNSC-FDEAILIFGDM-VKGGIGFDSTTVAAVLPGV-AELQDL 223
Query: 61 YVNMPAR---WRDSVCSNA-LISG----YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY 112
+ M + + S+A +I+G Y K G E A +F + + D+V++ +M+ GY
Sbjct: 224 ALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGY 283
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
E LF + G NS ++
Sbjct: 284 TCNNET-------------------------------ESSVRLFKELLVSGEKVNSSSIV 312
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
L F +HG ++ G + + ++ T+Y RL ++ A +F S++
Sbjct: 313 GLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEK 372
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKD---------------------------- 264
SWN++ISGY NG E+A LF+ M +
Sbjct: 373 SLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVH 432
Query: 265 ------------FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
FVS T +I ++ G++ ++ LF+MMPEK+ VTW A+ISG+ +
Sbjct: 433 DLINRESFESNIFVS-TALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYG 491
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
EA F EML V P +T SVL A + + +G +I
Sbjct: 492 HEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEI 532
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 289/537 (53%), Gaps = 33/537 (6%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +FD + E +V+W ++ Y++ D LF + +S TL + + C R
Sbjct: 68 AHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCAR 126
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+EG Q+HGLV + GF D + +S+++MY + G ++ KVF M +D VSWNSL
Sbjct: 127 LGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSL 186
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE------------------ 282
I GY GEIE A +FE MP KD SWT +I G S G LE
Sbjct: 187 IDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWN 246
Query: 283 -------------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+ ELF+ MPE+ VTW ++I+G+ N+Q+ +A + F MLR+D+ P
Sbjct: 247 AMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISP 306
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N T+ +SA++ +L G +H+++VK ++D + L+ +YSKCG+V A R+F
Sbjct: 307 NYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVF 366
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+I ++ + + S+I G +GL E+ L LF +M GL P+ ITF+ VL+AC+H G E
Sbjct: 367 RSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAE 426
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+ YFK M Y I+P EHY C++D+L RAG L EA D I M + +W +LL
Sbjct: 427 DAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSG 486
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
R H N+ + + AAQHL++L PD+ YV+LS++Y+ G +VR K K ++K P
Sbjct: 487 SRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDP 546
Query: 570 GCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK-EFDWPKHDWSLLGLERD 625
GCS I + +H F+ G KS +EI + L + K P LL LE D
Sbjct: 547 GCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEED 603
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 161/342 (47%), Gaps = 14/342 (4%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRC 87
++F M ++ VS+ ++I G+ R G A E++ MP + DS LI G K G+
Sbjct: 170 KVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEK--DSFSWTILIDGLSKSGKL 227
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
E A +F+ M ++ V+W +M++GY K G A+E+FD+MPE+++V W +M+ GY +
Sbjct: 228 EAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNK 287
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
F LF M R ++ N T+ A G VH + + GF D +LG
Sbjct: 288 QFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGT 347
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF-- 265
+I MY + G + A +VF + K+ W S+I G +G +E+ LF+ M
Sbjct: 348 LLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKP 407
Query: 266 --VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRW 318
+++ ++ S G E + F MM + + +I EEA +
Sbjct: 408 HAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEA-KD 466
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
IE R ++ N++ +S+LS S + G H++ +
Sbjct: 467 TIE--RMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDL 506
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 202/470 (42%), Gaps = 99/470 (21%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMP---MRNAVSYAAMITGFVRRGMFYEA 57
+ + T S+N +I I N S +A +F + + ++ + ++ G R G E
Sbjct: 75 IQEPTLVSWNLLIKCYIENQRS-NDAIALFCKLLCDFVPDSFTLPCVLKGCARLGALQEG 133
Query: 58 EELY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
++++ V D ++L+S Y K G E ++F+ M +KDVV+W S++DGY +
Sbjct: 134 KQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARC 193
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + A E+F++MPEK+ +WT ++DG K E D+F M NS++
Sbjct: 194 GEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMP----IRNSVSW---- 245
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
N++I Y + G + A ++F M +R V
Sbjct: 246 -------------------------------NAMINGYMKAGDSNTAKELFDQMPERSLV 274
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG--------------------- 274
+WNS+I+GY N + +A +LFE M +D T I G
Sbjct: 275 TWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYI 334
Query: 275 ------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
+S G+++ ++ +F +P+K WT++I G + E+
Sbjct: 335 VKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTL 394
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS----- 371
F EM R ++P+ +T VL+A + + G AH M D I+ S
Sbjct: 395 ELFDEMCRTGLKPHAITFIGVLNACS-----HAGFAEDAHRYFKMMTYDYGIKPSIEHYG 449
Query: 372 -LVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISGFAQNG---LGEEA 416
L+ + + G++ +A + + N V + S++SG ++G +GE A
Sbjct: 450 CLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYA 499
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS--KCGNVVDAYRIFTNIDERNIVSYNS 402
T + +Q+HA +K + S+ + L++LY+ + N+ A+ +F I E +VS+N
Sbjct: 26 GTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNL 85
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+I + +N +A+ LF K+ + VP+ T VL C +G ++EG
Sbjct: 86 LIKCYIENQRSNDAIALFCKLLCD-FVPDSFTLPCVLKGCARLGALQEG 133
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 295/528 (55%), Gaps = 32/528 (6%)
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
R+ AR++FD++P+ N+ W +M GY + + + + LF M+ + N T ++ +
Sbjct: 148 RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 207
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM------- 229
+CG+ EG QVH + + GF + +G ++I MY G + +A K+F M
Sbjct: 208 SCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVA 267
Query: 230 ------------------------SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
+RD V WN ++SGY+ G++ EA +LF MP +D
Sbjct: 268 WTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDV 327
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ W T++ G+++ GN+E LF MPE++ +W A+I G+ +N + E F ML +
Sbjct: 328 MFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSE 387
Query: 326 -DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
DV PN TL +VLSA A L+ G +H + ++ +V + N+L+ +Y+KCG + +
Sbjct: 388 SDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIEN 447
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A +F +D ++++S+N++I G A + G +ALNLF +MK+ G P+ ITF+ +L AC H
Sbjct: 448 AISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTH 507
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
+GLVE+GF YF+SM Y I P EHY CMVD+L RAG L +A + M E +W
Sbjct: 508 MGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWA 567
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LLGA R + N++LA+LA Q L+ELEP + YV+LS++Y G+ D R+++ +
Sbjct: 568 GLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTG 627
Query: 565 IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+K PGCS I + D V F + + ++EI L+ + K + F +
Sbjct: 628 FKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGY 675
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 162/364 (44%), Gaps = 54/364 (14%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
++ +A++IF M RN V++ +MI G++ A L+ P R D V N ++SGY
Sbjct: 249 TVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPER--DVVLWNIMVSGY 306
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
++ G EA ++F M +DV+ W +++ GY G V +F++MPE+N+ +W A++
Sbjct: 307 IEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIG 366
Query: 142 GYMKVDCFEDGFDLFLSMRR----GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
GY F F++ S +R + N TL + AC R G VH
Sbjct: 367 GYAHNGLF---FEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESS 423
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY------------- 244
G ++ +GN+++ MY + G ++ A VF M +D +SWN+LI G
Sbjct: 424 GLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLF 483
Query: 245 ----------------------VHNGEIEEAYRLFERMPGKDFV-----SWTTMITGFSS 277
H G +E+ + F+ M + + M+ +
Sbjct: 484 FQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLAR 543
Query: 278 KGNLEKSIELFNMMP-EKDDVTWTAIISG---FVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
G LE++ MP E D V W ++ + N E E A + IE+ K+ N +
Sbjct: 544 AGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKN-PANYVM 602
Query: 334 LSSV 337
LS++
Sbjct: 603 LSNI 606
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 129/579 (22%), Positives = 211/579 (36%), Gaps = 160/579 (27%)
Query: 8 SYNAMITALINNNCSIYE----AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
YN IT + C+ + A ++F +P N + +M G+ + + E L+
Sbjct: 130 QYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQ 189
Query: 64 M------------PARWRDSVCSNALISG-------------------------YLKVGR 86
M P + NALI G Y G
Sbjct: 190 MKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGT 249
Query: 87 CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV 146
+A +IF M E++VVAW SM++GY ++ AR +FD PE++VV W MV GY++
Sbjct: 250 VGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEG 309
Query: 147 DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
+ LF M + D++
Sbjct: 310 GDMVEARKLFXEMP---------------------------------------NRDVMFW 330
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
N+++ Y G ++ +F M +R+ SWN+LI GY HNG E F+RM + V
Sbjct: 331 NTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDV 390
Query: 267 SW--TTMITGFSS----------------------KGN----------------LEKSIE 286
T++T S+ KGN +E +I
Sbjct: 391 PPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAIS 450
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+F M KD ++W +I G + + +A F +M +P+ +T +L A
Sbjct: 451 VFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGL 510
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
+ G ++ ++ D Y I I+ Y M+
Sbjct: 511 VEDG-------------------------FAYFQSMADDYLIMPQIEH-----YGCMVDM 540
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
A+ G E+A RKM E + + + +L AC VE + +++ L +EP
Sbjct: 541 LARAGRLEQAXAFVRKMPVEA---DGVIWAGLLGACRIYKNVELAEL---ALQRLIELEP 594
Query: 467 -GPEHYACMVDILGRAGSLAEAIDLINSMT---FEPPPG 501
P +Y + +I G AG + L +M F+ PG
Sbjct: 595 KNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPG 633
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 160/373 (42%), Gaps = 63/373 (16%)
Query: 189 QVHGLVSRF---GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
QVH + ++ GF Y+ + ++T+ L M A ++F + + WNS+ GY
Sbjct: 116 QVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYA 175
Query: 246 HNGEIEEAYRLFERMPGKD----------------------------------------F 265
+ E LF +M G D F
Sbjct: 176 QSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPF 235
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
V TT+I +S+ G + + ++F M E++ V WT++I+G++ + A R F +
Sbjct: 236 VG-TTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPER 294
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES-DVSIQNSLVSLYSKCGNVVD 384
DV VL + + G + A + M + DV N+++ Y+ GNV
Sbjct: 295 DV---------VLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEA 345
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACN 443
+F + ERNI S+N++I G+A NGL E L F++M E V PN T ++VLSAC
Sbjct: 346 LEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACA 405
Query: 444 HVGLVEEG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
+G ++ G +Y +S N+ G ++D+ + G + AI + M +
Sbjct: 406 RLGALDLGKWVHVYAESSGLKGNVYVG----NALMDMYAKCGIIENAISVFRGMDTKDLI 461
Query: 501 GVWGALLGAGRTH 513
W L+G H
Sbjct: 462 S-WNTLIGGLAMH 473
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 8/191 (4%)
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ T Q QI A ++ + + I LV++ + + A ++F I + NI +NS
Sbjct: 110 SCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNS 169
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV-GLVEEGFIYFKSMKTL 461
M G+AQ+ E + LF +MK + PN TF VL +C + L+E ++ +K
Sbjct: 170 MFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKC- 228
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
P ++D+ G++ +A + M FE W +++ L+ DL +
Sbjct: 229 -GFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMING--YILSADL--V 282
Query: 522 AAQHLMELEPD 532
+A+ L +L P+
Sbjct: 283 SARRLFDLAPE 293
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/502 (36%), Positives = 286/502 (56%), Gaps = 44/502 (8%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
M+ GY + + AR++FDKMPE+++ +W M+ GY++ + LF M
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMP------- 53
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ DI+ N++++ Y + GF+DEA ++F
Sbjct: 54 --------------------------------ERDIVSWNAMLSGYAQNGFVDEAREIFY 81
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
M ++ +SWN L++ YV NG IE+A RLFE VSW ++ GF + K L
Sbjct: 82 KMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGF-----VRKRRNL 136
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ MP++D ++W+A+I+G+ N EEA +F+EM R R N+ + + LS + A L
Sbjct: 137 FDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAAL 196
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
G Q+H +VK ++ + N+L+++Y KCG++ +A F I E+++VS+N+MI G+
Sbjct: 197 ELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGY 256
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
A++G GEEAL +F MK G+ P+ T +SVL+AC+H GLV++G YF SM Y I
Sbjct: 257 ARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAK 316
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
HY CMVD+LGRAG L EA +L+ +M FEP WGALLGA R H N +L + AAQ +
Sbjct: 317 LVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIF 376
Query: 528 ELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGR 587
E+EP ++ Y++LS LY+ G+ D ++R++ + K ++K PG SW+ +++K+H F G
Sbjct: 377 EMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGD 436
Query: 588 KSCLDLKEIEVTLQTISKGTKE 609
S +I L+ + K+
Sbjct: 437 TSHPHTDKIYTFLEEMDLKLKQ 458
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 193/395 (48%), Gaps = 23/395 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N M+T + N + A +F MP R+ VS+ AM++G+ + G EA E+
Sbjct: 21 MPERDLFSWNVMLTGYVRNR-DLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREI 79
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP + + + N L++ Y++ GR E+A R+FE+ ++ +V+W ++ G+ +K
Sbjct: 80 FYKMPLK--NGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRK----- 132
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
R +FD MP+++ ++W+AM+ GY + C E+ F+ M+R N + T C
Sbjct: 133 RRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSN 192
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G Q+H + + G+ +GN+++ MY + G +DEA F + ++D VSWN++
Sbjct: 193 IAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTM 252
Query: 241 ISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I GY +G EEA +FE M D + +++ S G +++ E F M
Sbjct: 253 IHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYG 312
Query: 297 VT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+T +T ++ Q EEA M P+ T ++L AS G
Sbjct: 313 ITAKLVHYTCMVDLLGRAGQLEEAQNLMKNM---PFEPDAATWGALLGASRIHGNTELGE 369
Query: 352 QIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDA 385
+ A + ME S L+S LY+ G DA
Sbjct: 370 K--AAQIIFEMEPHNSGMYILLSKLYAASGRWSDA 402
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 195/462 (42%), Gaps = 121/462 (26%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV 103
MI+G++R F A +L+ MP RD N +++GY++ + A +FE M E+D+V
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPE--RDLFSWNVMLTGYVRNRDLKTARALFERMPERDIV 58
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
+W +M+ GY + G V EAREIF KMP KN ++W ++ Y++ ED LF S
Sbjct: 59 SWNAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESK---- 114
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
D+ ++ N ++ GF+ +
Sbjct: 115 -----------------------------------MDWTLVSWNCLMG-----GFVRKRR 134
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-------ERMPGKDF----------- 265
+F M +RD++SW+++I+GY NG EEA F ER+ F
Sbjct: 135 NLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIA 194
Query: 266 ------------------VSW---TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
W ++ + G+++++ + F + EKD V+W +I
Sbjct: 195 ALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIH 254
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G+ + EEA F M +RP+ T+ SVL+A + ++QGS+ + MN +
Sbjct: 255 GYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSE---YFYSMNRDY 311
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
++ + +V Y M+ + G EEA NL + M
Sbjct: 312 GITAK---------------------------LVHYTCMVDLLGRAGQLEEAQNLMKNMP 344
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
E P+ T+ ++L A G E G K+ + ++ +EP
Sbjct: 345 FE---PDAATWGALLGASRIHGNTELG---EKAAQIIFEMEP 380
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 208/647 (32%), Positives = 337/647 (52%), Gaps = 56/647 (8%)
Query: 14 TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------ 64
T L++ C S++EA +F + + Y M+ G+ R +A + M
Sbjct: 113 TKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVR 172
Query: 65 PARWRDS----VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
P + + VC + + L+ G+ E ++ +V A +V+ Y K V E
Sbjct: 173 PVVYNFTYLLKVCGD---NADLRKGK-EIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEE 228
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++FD+MPE+++V W ++ GY + + +L L M+ G +SIT+ + A
Sbjct: 229 AYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVAD 288
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
R G +HG R GF+ + + +++ MY + G + A +F M+ + VSWNS+
Sbjct: 289 VGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSM 348
Query: 241 ISGYVHNGEIEEAYRLFERMP--------------------------------------- 261
I GYV NG+ A +F++M
Sbjct: 349 IDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLEL 408
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G D ++I+ +S ++ + E+F + K V+W A+I G+ N + EA +F +
Sbjct: 409 GSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCK 468
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M ++++P+ T+ SV+ A A + L Q IH V++ ++ +V + +LV +Y+KCG
Sbjct: 469 MQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGA 528
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
V A ++F +DER++ ++N+MI G+ +GLG+ AL LF KMK E + PN++TFL VLSA
Sbjct: 529 VHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSA 588
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C+H GLVEEGF YF SMK Y +EP +HY MVD+LGRA L EA D I M EP
Sbjct: 589 CSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAIS 648
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
V+GA+LGA R H N++L + AA + +L+PD +V+L+++Y+ RVR +
Sbjct: 649 VFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTME 708
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K I+K+PG S + L+++VH F +G S K+I L+T+ K
Sbjct: 709 KKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIK 755
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
++K + S+ Q LVSL+ K G++ +A R+F I+++ Y++M+ G+A+N ++A
Sbjct: 100 IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDA 159
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACN-----------HVGLVEEGF 452
++ F +M+ +G+ P F +L C H L+ GF
Sbjct: 160 VSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGF 206
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 222/665 (33%), Positives = 355/665 (53%), Gaps = 66/665 (9%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNA-LISG 80
S+ A ++F M RNAV+ ++ G VR+ EA +L+++M + S S L+S
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 81 Y----------LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
+ LK GR I +V+ V +V+ Y K G + +AR +F M +
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K+ V+W +M+ G + CF + + + SMRR + S TL +C + G Q+
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE- 249
HG + G D ++ + N+++T+Y G+++E K+FS M + D VSWNS+I +
Sbjct: 438 HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERS 497
Query: 250 IEEAYRLF---ERMPGK------------------------------------DFVSWTT 270
+ EA F +R K + +
Sbjct: 498 LPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENA 557
Query: 271 MITGFSSKGNLEKSIELFNMMPEK-DDVTWTAIISGFVNNEQYEEAFR--WFIEMLRKDV 327
+I + G ++ ++F+ M E+ D+VTW ++ISG+++NE +A WF ML+
Sbjct: 558 LIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWF--MLQTGQ 615
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
R + ++VLSA A+ ATL +G ++HA V+ +ESDV + ++LV +YSKCG + A R
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHVG 446
F + RN S+NSMISG+A++G GEEAL LF MK +G P+ +TF+ VLSAC+H G
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
L+EEGF +F+SM Y + P EH++CM D+LGRAG L + D I M +P +W +
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795
Query: 507 LGA-----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
LGA GR +L K AA+ L +LEP++A YV+L ++Y+ G+ D + R K K
Sbjct: 796 LGACCRANGR---KAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMK 852
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
++K G SW+ +KD VH+F+AG KS D I L+ +++ ++ + P+ ++L
Sbjct: 853 DADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALY 912
Query: 621 GLERD 625
LE++
Sbjct: 913 DLEQE 917
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 230/473 (48%), Gaps = 61/473 (12%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+R+++ ++KDV ++++ Y + G + AR++FD+MP +N V+W +V GY + +
Sbjct: 25 SRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHK 84
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEAC------GRFFRYREGVQVHGLVSRFGFDYDII 204
+ M + G+ N + AC G F G Q+HGL+ + + D +
Sbjct: 85 EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF----GRQIHGLMFKLSYAVDAV 140
Query: 205 LGNSIITMYGR-LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--- 260
+ N +I+MY + +G + A F + +++VSWNS+IS Y G+ A+R+F M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 261 ---PGK-----------------------------------DFVSWTTMITGFSSKGNLE 282
P + D + +++ F+ G+L
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQ--LTLSSVLS 339
+ ++FN M ++ VT ++ G V + EEA + F++M DV P + LSS
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE 320
Query: 340 ASAATAT-LNQGSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
S A L +G ++H HV+ + + V I N LV++Y+KCG++ DA R+F + +++
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFK 456
VS+NSMI+G QNG EA+ ++ M+ ++P T +S LS+C + + G I+ +
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
S+K ++ + ++ + G L E + +SM E W +++GA
Sbjct: 441 SLKLGIDLNVSVSN--ALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 222/490 (45%), Gaps = 73/490 (14%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N +I A + S+ A ++F MP+RN VS+A +++G+ R G E +E V + +
Sbjct: 40 NNLINAYLETGDSV-SARKVFDEMPLRNCVSWACIVSGYSRNG---EHKEALVFLRDMVK 95
Query: 70 DSVCSNALISGYLKVGR-CEEAARI------------FEAMVEKDVVAWGSMVDGYCKK- 115
+ + SN ++ V R C+E + F+ D V ++ Y K
Sbjct: 96 EGIFSNQY--AFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL-TIL 174
G V A F + KN V+W +++ Y + F +F SM+ G T +++
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 175 FEACGRF---FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
AC R E Q+ + + G D+ +G+ +++ + + G + A KVF+ M
Sbjct: 214 TTACSLTEPDVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET 271
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM------------------------------P 261
R+AV+ N L+ G V EEA +LF M
Sbjct: 272 RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKK 331
Query: 262 GKDFVSWTTMITG---------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
G++ V + TG ++ G++ + +F M +KD V+W ++I+G
Sbjct: 332 GRE-VHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL 390
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N + EA + M R D+ P TL S LS+ A+ G QIH +K+ ++ +V
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 450
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG-EEALNLFRKMKD 425
S+ N+L++LY++ G + + +IF+++ E + VS+NS+I A++ EA+ F +
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR 510
Query: 426 EGLVPNQITF 435
G N+ITF
Sbjct: 511 AGQKLNRITF 520
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 174/401 (43%), Gaps = 86/401 (21%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM----------PMRNAVSYAAMITGFVR 50
M D+ S S+N+MIT L N C I EA E + +M + +++S A + + +
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFI-EAVERYKSMRRHDILPGSFTLISSLSSCASLK-WAK 432
Query: 51 RGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
G E L + + + SNAL++ Y + G E +IF +M E D V+W S++
Sbjct: 433 LGQQIHGESLKLGIDL---NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIG 489
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
+ R +PE V FL+ +R G N IT
Sbjct: 490 ALARSER---------SLPEAVVC---------------------FLNAQRAGQKLNRIT 519
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ + A G Q+HGL + + N++I YG+ G MD K+FS M+
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMA 579
Query: 231 -KRDAVSWNSLISGYVHNGEIEEAYRL--FERMPGK--DFVSWTTMITGFSSKGNLEKSI 285
+RD V+WNS+ISGY+HN + +A L F G+ D + T+++ F+S LE+ +
Sbjct: 580 ERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGM 639
Query: 286 EL-----------------------------------FNMMPEKDDVTWTAIISGFVNNE 310
E+ FN MP ++ +W ++ISG+ +
Sbjct: 640 EVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHG 699
Query: 311 QYEEAFRWFIEM-LRKDVRPNQLTLSSVLSASAATATLNQG 350
Q EEA + F M L P+ +T VLSA + L +G
Sbjct: 700 QGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 129/304 (42%), Gaps = 45/304 (14%)
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + + D D+ L N++I Y G A KVF M R+ VSW ++SGY NGE
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 251 EEAYRLFERMPGKD-------FVS--------------WTTMITGFSSK----------- 278
+EA M + FVS + I G K
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 279 ----------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
G++ ++ F + K+ V+W +IIS + AFR F M R
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 329 PNQLTLSSVLSASAATAT--LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
P + T S+++ + + + QI + K + +D+ + + LVS ++K G++ A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
++F ++ RN V+ N ++ G + GEEA LF M V + +++ +LS+
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE-SYVILLSSFPEYS 322
Query: 447 LVEE 450
L EE
Sbjct: 323 LAEE 326
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H+ + K ++ DV + N+L++ Y + G+ V A ++F + RN VS+ ++SG+++NG
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+EAL R M EG+ NQ F+SVL AC +G V G ++ + + L
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV--GILFGRQIHGL 129
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 327/603 (54%), Gaps = 56/603 (9%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMP----MRNAVSYAAMITGFVR-RGMFYEAE 58
R S YNAMIT +N + A E+F M + ++ ++++ V G +
Sbjct: 110 RDSVFYNAMITGYAHNG-DGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCG 168
Query: 59 ELYVNMPARWRDSVCS---NALISGYLKVGRCEE----------AARIFEAMVEKDVVAW 105
+++ + V S NAL+S Y+K R E A ++F+ M ++D + W
Sbjct: 169 QMHCAVVKTGMGCVSSSVLNALLSVYVK--RASELGIPCSAMVSARKLFDEMPKRDELTW 226
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+M+ GY + + ARE+F+ M E AW AM+ GY+ CF++ L MR G+
Sbjct: 227 TTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQ 286
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD----YDIILGNSIITMYGRLGFMDE 221
F+ IT T + AC ++ G Q+H + + + + + + N++IT+Y + +DE
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNL 281
A K+F M R+ ++WN+++SGYV+ G +EEA FE MP K+ ++ T MI+G + G
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
++ ++LF M + GF P + L+A
Sbjct: 407 DEGLKLFKQMR----------LDGF---------------------EPCDFAFAGALTAC 435
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ L G Q+HA +V + ES +S+ N+++S+Y+KCG V A +F + ++VS+N
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWN 495
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
SMI+ Q+G G +A+ LF +M EG+ P++ITFL+VL+AC+H GLVE+G YF SM
Sbjct: 496 SMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLES 555
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I P +HYA MVD+ RAG + A +I+SM +P VW ALL R H N+DL
Sbjct: 556 YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIE 615
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA+ L +L P + YV+LS++Y+ +G+ D +VR + + +RK P CSWI +++KVH
Sbjct: 616 AAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVH 675
Query: 582 LFL 584
+F+
Sbjct: 676 VFM 678
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 204/441 (46%), Gaps = 43/441 (9%)
Query: 31 ATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEA 90
A+ + AV + +GF RG F N L+ Y K A
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFL-------------------NRLLEMYCKSSNVVYA 67
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKNVVAWTAMVDGYMKVDC 148
++FE + D +A +++ YC G + REIF+ P ++ V + AM+ GY
Sbjct: 68 RQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGD 127
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV-QVHGLVSRFGFD-YDIILG 206
+LF +MRR + T T + A F + Q+H V + G +
Sbjct: 128 GHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVL 187
Query: 207 NSIITMY----GRLGF----MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
N+++++Y LG M A K+F M KRD ++W ++I+GYV N ++ A +FE
Sbjct: 188 NALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE 247
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAIISGFVNNEQYEE 314
M +W MI+G+ G ++++ L M + DD+T+T IIS N ++
Sbjct: 248 AMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQM 307
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATL----NQGSQIHAHVVKMNMESDVSIQN 370
+ +L+ ++ PN S LS S A TL N+ + M + + ++ N
Sbjct: 308 GKQMHAYILKNELNPNH---SFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIIT-WN 363
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+++S Y G + +A F + +N+++ MISG AQNG G+E L LF++M+ +G P
Sbjct: 364 AILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEP 423
Query: 431 NQITFLSVLSACNHVGLVEEG 451
F L+AC+ +G +E G
Sbjct: 424 CDFAFAGALTACSVLGALENG 444
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 133/281 (47%), Gaps = 48/281 (17%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP--EKD 295
N L+ Y + + A +LFE +P D ++ TT+IT + + GNLE E+FN P +D
Sbjct: 52 NRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRD 111
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA-TATLNQGSQIH 354
V + A+I+G+ +N A F M R D RP+ T +SVLSA Q Q+H
Sbjct: 112 SVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMH 171
Query: 355 AHVVKMNMES-DVSIQNSLVSLYSK--------CGNVVDAYRIFTNIDERNIVS------ 399
VVK M S+ N+L+S+Y K C +V A ++F + +R+ ++
Sbjct: 172 CAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMIT 231
Query: 400 -------------------------YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+N+MISG+ G +EAL L RKM+ G+ + IT
Sbjct: 232 GYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDIT 291
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKT-LYNIEPGPEHYACM 474
+ +++SAC +VG + G K M + E P H C+
Sbjct: 292 YTTIISACANVGSFQMG----KQMHAYILKNELNPNHSFCL 328
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 327/603 (54%), Gaps = 56/603 (9%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMP----MRNAVSYAAMITGFVR-RGMFYEAE 58
R S YNAMIT +N + A E+F M + ++ ++++ V G +
Sbjct: 110 RDSVFYNAMITGYAHNG-DGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCG 168
Query: 59 ELYVNMPARWRDSVCS---NALISGYLKVGRCEE----------AARIFEAMVEKDVVAW 105
+++ + V S NAL+S Y+K R E A ++F+ M ++D + W
Sbjct: 169 QMHCAVVKTGMGCVSSSVLNALLSVYVK--RASELGISCSAMVSARKLFDEMPKRDELTW 226
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+M+ GY + + ARE+F+ M E AW AM+ GY+ CF++ L MR G+
Sbjct: 227 TTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQ 286
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD----YDIILGNSIITMYGRLGFMDE 221
F+ IT T + AC ++ G QVH + + + + + + N++IT+Y + +DE
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNL 281
A K+F M R+ ++WN+++SGYV+ G +EEA FE MP K+ ++ T MI+G + G
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
++ ++LF M + GF P + L+A
Sbjct: 407 DEGLKLFKQMR----------LDGF---------------------EPCDFAFAGALTAC 435
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ L G Q+HA +V + ES +S+ N+++S+Y+KCG V A +F + ++VS+N
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWN 495
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
SMI+ Q+G G +A+ LF +M EG+ P++ITFL+VL+AC+H GLVE+G YF SM
Sbjct: 496 SMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLES 555
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I P +HYA MVD+ RAG + A +I+SM +P VW ALL R H N+DL
Sbjct: 556 YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIE 615
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA+ L +L P + YV+LS++Y+ +G+ + +VR + + +RK P CSWI +++KVH
Sbjct: 616 AAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVH 675
Query: 582 LFL 584
+F+
Sbjct: 676 VFM 678
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 204/441 (46%), Gaps = 43/441 (9%)
Query: 31 ATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEA 90
A+ + AV + +GF RG F N L+ Y K A
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFL-------------------NRLLEMYCKSSNLVYA 67
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKNVVAWTAMVDGYMKVDC 148
++FE + D +A +++ YC G + REIF+ P ++ V + AM+ GY
Sbjct: 68 RQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGD 127
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV-QVHGLVSRFGFD-YDIILG 206
+LF +MRR + T T + A F + Q+H V + G +
Sbjct: 128 GHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVL 187
Query: 207 NSIITMY----GRLGF----MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
N+++++Y LG M A K+F M KRD ++W ++I+GYV N ++ A +FE
Sbjct: 188 NALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE 247
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAIISGFVNNEQYEE 314
M +W MI+G+ G ++++ L M + DD+T+T IIS N ++
Sbjct: 248 AMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQM 307
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATL----NQGSQIHAHVVKMNMESDVSIQN 370
+ +L+ ++ PN S LS S A TL N+ + M + + ++ N
Sbjct: 308 GKQVHAYILKNELNPNH---SFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIIT-WN 363
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+++S Y G + +A F + +N+++ MISG AQNG G+E L LF++M+ +G P
Sbjct: 364 AILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEP 423
Query: 431 NQITFLSVLSACNHVGLVEEG 451
F L+AC+ +G +E G
Sbjct: 424 CDFAFAGALTACSVLGALENG 444
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 132/280 (47%), Gaps = 46/280 (16%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP--EKD 295
N L+ Y + + A +LFE +P D ++ TT+IT + + GNLE E+FN P +D
Sbjct: 52 NRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRD 111
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA-TATLNQGSQIH 354
V + A+I+G+ +N A F M R D RP+ T +SVLSA Q Q+H
Sbjct: 112 SVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMH 171
Query: 355 AHVVKMNMES-DVSIQNSLVSLYSK--------CGNVVDAYRIFTNIDERNIVS------ 399
VVK M S+ N+L+S+Y K C +V A ++F + +R+ ++
Sbjct: 172 CAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMIT 231
Query: 400 -------------------------YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+N+MISG+ G +EAL L RKM+ G+ + IT
Sbjct: 232 GYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDIT 291
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
+ +++SAC +VG + G + + E P H C+
Sbjct: 292 YTTIISACANVGSFQMG---KQVHAYILKNELNPNHSFCL 328
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 196/620 (31%), Positives = 328/620 (52%), Gaps = 51/620 (8%)
Query: 19 NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSN 75
+ CS I A +F M RN S+ +I G G+F + E + M ++ + D +
Sbjct: 116 SKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYS 175
Query: 76 ALIS-----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
++ +++G A + V+ ++++ Y K + ++ ++F+ M E
Sbjct: 176 GILQICIGLDSIELGNMVHAQIVIRGFTSHTFVS-TALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
NVV+W AM+ G+ D + D FDLFL M G+ ++ T + +A G + +V
Sbjct: 235 VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS--MMSKRDAVSWNSLISGYVHNG 248
G G D + ++G ++I M + G + EA +F+ ++ R WN++ISGY+ +G
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 249 EIEEAYRLFERMPGKD---------------------------------------FVSWT 269
E+A LF +M D +VS +
Sbjct: 355 FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSIS 414
Query: 270 TMIT-GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+ ++ G+LE ++FN M ++D ++WT++++ + ++++A F M + +
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIA 474
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PNQ T SSVL + A L G Q+H + K+ ++ D I+++LV +Y+KCG + DA ++
Sbjct: 475 PNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKV 534
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F I + VS+ ++I+G AQ+G+ ++AL LFR+M G+ PN +TFL VL AC+H GLV
Sbjct: 535 FNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLV 594
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
EEG YFK MK Y + P EHYAC+VD+L R G L +A++ I+ M EP VW LLG
Sbjct: 595 EEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLG 654
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R H N++L +LAAQ ++ + +++ YV+LS+ Y G +DG +R K + ++K
Sbjct: 655 ACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKE 714
Query: 569 PGCSWIILKDKVHLFLAGRK 588
PGCSWI + +H F AG +
Sbjct: 715 PGCSWISVNGTLHKFYAGDQ 734
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 241/484 (49%), Gaps = 48/484 (9%)
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
+V + Y K + A +FD+M ++N +WT ++ G + F DGF+ F M+
Sbjct: 105 LVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQS 164
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
G+ + + + + C G VH + GF + +++ MY +L +++
Sbjct: 165 QGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIED 224
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK------------------ 263
+ KVF+ M++ + VSWN++I+G+ N +A+ LF RM G+
Sbjct: 225 SYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGM 284
Query: 264 ---------------------DFVSWTTMITGFSSKGNLEKSIELFN--MMPEKDDVTWT 300
+ + T +I S G+L+++ +FN + + + W
Sbjct: 285 LRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWN 344
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+ISG++ + E+A F +M + D+ + T SV +A AA L+ G ++HA +K
Sbjct: 345 AMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKS 404
Query: 361 NMESD-VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+E + VSI N++ + Y+KCG++ D ++F +++R+++S+ S+++ ++Q ++A+ +
Sbjct: 405 GLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEI 464
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDIL 478
F M+ EG+ PNQ TF SVL +C ++ L+E G ++ K +++ E + +VD+
Sbjct: 465 FSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIE--SALVDMY 522
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL--EPDSATP 536
+ G L +A + N ++ W A++ H +D A + +++L EP++ T
Sbjct: 523 AKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTF 581
Query: 537 YVVL 540
VL
Sbjct: 582 LCVL 585
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 41/304 (13%)
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
RF + + V L S+F + ++L N + Y + +D A ++F MS+R+ SW
Sbjct: 81 ARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWT 140
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK-------------------------DFVSWTTMIT 273
LI+G NG + + F M + + V +I
Sbjct: 141 VLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIR 200
Query: 274 GFSSKG--------------NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
GF+S +E S ++FN M E + V+W A+I+GF +N+ Y +AF F
Sbjct: 201 GFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLF 260
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+ M+ + V P+ T V A +N+ ++ + +++ ++S+ + +L+ + SKC
Sbjct: 261 LRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKC 320
Query: 380 GNVVDAYRIFTN--IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
G++ +A IF + I R +N+MISG+ ++G E+AL LF KM + + T+ S
Sbjct: 321 GSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCS 380
Query: 438 VLSA 441
V +A
Sbjct: 381 VFNA 384
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 16/218 (7%)
Query: 347 LNQGSQIHAHVVKMNMESDVSI--QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L Q +H ++K + S+ N + YSKC ++ A R+F + +RN S+ +I
Sbjct: 84 LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
+G A+NGL + F +M+ +G+ P+Q + +L C + +E G + + I
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIV----I 199
Query: 465 EPGPEHYACMVDILGRAGSLAEAID---LINSMTFEPPPGVWGALL-GAGRTHLNLDLAK 520
H +L L E D + N+MT E W A++ G L LD
Sbjct: 200 RGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT-EVNVVSWNAMITGFTSNDLYLDAFD 258
Query: 521 LAAQHLME-LEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
L + + E + PD+ T + IG RD N+ +
Sbjct: 259 LFLRMMGEGVTPDAQT----FIGVAKAIGMLRDVNKAK 292
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 196/620 (31%), Positives = 328/620 (52%), Gaps = 51/620 (8%)
Query: 19 NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSN 75
+ CS I A +F M RN S+ +I G G+F + E + M ++ + D +
Sbjct: 116 SKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYS 175
Query: 76 ALIS-----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
++ +++G A + V+ ++++ Y K + ++ ++F+ M E
Sbjct: 176 GILQICIGLDSIELGNMVHAQIVIRGFTSHTFVS-TALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
NVV+W AM+ G+ D + D FDLFL M G+ ++ T + +A G + +V
Sbjct: 235 VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS--MMSKRDAVSWNSLISGYVHNG 248
G G D + ++G ++I M + G + EA +F+ ++ R WN++ISGY+ +G
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 249 EIEEAYRLFERMPGKD---------------------------------------FVSWT 269
E+A LF +M D +VS +
Sbjct: 355 FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSIS 414
Query: 270 TMIT-GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+ ++ G+LE ++FN M ++D ++WT++++ + ++++A F M + +
Sbjct: 415 NAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIA 474
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PNQ T SSVL + A L G Q+H + K+ ++ D I+++LV +Y+KCG + DA ++
Sbjct: 475 PNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKV 534
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F I + VS+ ++I+G AQ+G+ ++AL LFR+M G+ PN +TFL VL AC+H GLV
Sbjct: 535 FNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLV 594
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
EEG YFK MK Y + P EHYAC+VD+L R G L +A++ I+ M EP VW LLG
Sbjct: 595 EEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLG 654
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R H N++L +LAAQ ++ + +++ YV+LS+ Y G +DG +R K + ++K
Sbjct: 655 ACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKE 714
Query: 569 PGCSWIILKDKVHLFLAGRK 588
PGCSWI + +H F AG +
Sbjct: 715 PGCSWISVNGTLHKFYAGDQ 734
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 241/484 (49%), Gaps = 48/484 (9%)
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
+V + Y K + A +FD+M ++N +WT ++ G + F DGF+ F M+
Sbjct: 105 LVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQS 164
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
G+ + + + + C G VH + GF + +++ MY +L +++
Sbjct: 165 QGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIED 224
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK------------------ 263
+ KVF+ M++ + VSWN++I+G+ N +A+ LF RM G+
Sbjct: 225 SYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGM 284
Query: 264 ---------------------DFVSWTTMITGFSSKGNLEKSIELFN--MMPEKDDVTWT 300
+ + T +I S G+L+++ +FN + + + W
Sbjct: 285 LRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWN 344
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+ISG++ + E+A F +M + D+ + T SV +A AA L+ G ++HA +K
Sbjct: 345 AMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKS 404
Query: 361 NMESD-VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+E + VSI N++ + Y+KCG++ D ++F +++R+++S+ S+++ ++Q ++A+ +
Sbjct: 405 GLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEI 464
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDIL 478
F M+ EG+ PNQ TF SVL +C ++ L+E G ++ K +++ E + +VD+
Sbjct: 465 FSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIE--SALVDMY 522
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL--EPDSATP 536
+ G L +A + N ++ W A++ H +D A + +++L EP++ T
Sbjct: 523 AKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTF 581
Query: 537 YVVL 540
VL
Sbjct: 582 LCVL 585
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 41/304 (13%)
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
RF + + V L S+F + ++L N + Y + +D A ++F MS+R+ SW
Sbjct: 81 ARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWT 140
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK-------------------------DFVSWTTMIT 273
LI+G NG + + F M + + V +I
Sbjct: 141 VLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIR 200
Query: 274 GFSSKG--------------NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
GF+S +E S ++FN M E + V+W A+I+GF +N+ Y +AF F
Sbjct: 201 GFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLF 260
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+ M+ + V P+ T V A +N+ ++ + +++ ++S+ + +L+ + SKC
Sbjct: 261 LRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKC 320
Query: 380 GNVVDAYRIFTN--IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
G++ +A IF + I R +N+MISG+ ++G E+AL LF KM + + T+ S
Sbjct: 321 GSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCS 380
Query: 438 VLSA 441
V +A
Sbjct: 381 VFNA 384
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 16/218 (7%)
Query: 347 LNQGSQIHAHVVKMNMESDVSI--QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L Q +H ++K + S+ N + YSKC ++ A R+F + +RN S+ +I
Sbjct: 84 LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
+G A+NGL + F +M+ +G+ P+Q + +L C + +E G + + I
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIV----I 199
Query: 465 EPGPEHYACMVDILGRAGSLAEAID---LINSMTFEPPPGVWGALL-GAGRTHLNLDLAK 520
H +L L E D + N+MT E W A++ G L LD
Sbjct: 200 RGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT-EVNVVSWNAMITGFTSNDLYLDAFD 258
Query: 521 LAAQHLME-LEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
L + + E + PD+ T + IG RD N+ +
Sbjct: 259 LFLRMMGEGVTPDAQT----FIGVAKAIGMLRDVNKAK 292
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 202/649 (31%), Positives = 335/649 (51%), Gaps = 51/649 (7%)
Query: 14 TALINNNCSIYEA-FEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PA 66
A + + CS + A +F MP RN S+ MI G G+F++ + + M P
Sbjct: 161 AAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPD 220
Query: 67 RWRDSVCSNALIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
++ S + I L++G+ A + V+ S+++ Y K G + ++ +F
Sbjct: 221 KFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVS-TSLLNMYAKLGSIEDSYWVF 279
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+ M E N V+W AM+ G + FDLF+ M+ G N TL + +A G+
Sbjct: 280 NMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVN 339
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS--WNSLISG 243
G +V S G + ++++G ++I MY + G + +A VF V+ WN++ISG
Sbjct: 340 MGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISG 399
Query: 244 YVHNGEIEEAYRLFERMP----GKDFVSWTTMITG------------------------- 274
Y +G +EA L+ +M D ++ ++
Sbjct: 400 YSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLM 459
Query: 275 -----------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+S G LE ++F+ M E+D V+WT +++ + + EEA F M
Sbjct: 460 VVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMR 519
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ PNQ T SSVL + A+ L G Q+H + K ++++ I+++L+ +Y+KCG++
Sbjct: 520 EEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSIT 579
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+A ++F I +IVS+ ++ISG+AQ+GL E+AL LFR+M+ G+ N +T L VL AC+
Sbjct: 580 EAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS 639
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H G+VEEG YF+ M+ Y + P EHYAC++D+LGR G L +A++ I M EP VW
Sbjct: 640 HGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVW 699
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
LLG R H N++L ++AA+ ++ + P+ + YV+LS+ Y G DG +R K +
Sbjct: 700 QTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQ 759
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
++K PG SWI +K +VH F +G + KEI V L+ + + K +
Sbjct: 760 GVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMGY 808
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 124/277 (44%), Gaps = 38/277 (13%)
Query: 217 GFMDEANKVFSMMSKRD------AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTT 270
G + EA V ++ K + V +N Y E A +F+ MP ++ SWT
Sbjct: 132 GSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTV 191
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
MI G + G + + F++F EML + P+
Sbjct: 192 MIVGSTEHG-------------------------------LFFDGFKFFCEMLNSGILPD 220
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ S+++ + +L G +HA +V + + + SL+++Y+K G++ D+Y +F
Sbjct: 221 KFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFN 280
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ E N VS+N+MISG NGL EA +LF +MK+ PN T +SV A + V
Sbjct: 281 MMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNM 340
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
G ++ + IE ++D+ + GSL +A
Sbjct: 341 G-KEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDA 376
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 109/244 (44%), Gaps = 19/244 (7%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESD--VSIQNSLVSLYSKCGNVVDAYRIFTN 391
L VL A ++ + +H V+K N E + + N +YSKC A +F
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ +RN+ S+ MI G ++GL + F +M + G++P++ + +++ +C + +E G
Sbjct: 181 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 240
Query: 452 FIYFKSMKTLYNIEPGPEHY---ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL- 507
K + + H ++++ + GS+ ++ + N MT E W A++
Sbjct: 241 ----KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT-EHNQVSWNAMIS 295
Query: 508 GAGRTHLNLDLAKLAAQHLMELEPDSATPYV-VLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
G L+L+ L + ++ + TP + L + +GK D V M K+++
Sbjct: 296 GCTSNGLHLEAFDL----FVRMKNGACTPNMYTLVSVSKAVGKLVD---VNMGKEVQNCA 348
Query: 567 KSPG 570
G
Sbjct: 349 SELG 352
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 331/614 (53%), Gaps = 33/614 (5%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY---VNMPARWRDSVCSNALIS 79
+ +A +F M RN S+ A++ + G + E +L+ VN R D +
Sbjct: 61 VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVR-PDHFVFPKVFK 119
Query: 80 GYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
++ +++ M+ E + GS++D + K GR+ AR F+++ K+V
Sbjct: 120 ACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFM 179
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W MV GY F+ ++F M G+ NSIT+ AC R G ++HG
Sbjct: 180 WNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI 239
Query: 196 RFG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL--ISGYVHNGEIEE 252
+ D D+++GNS++ Y + ++ A + F M+ + D VSWN++ ++G+ G+ +
Sbjct: 240 KVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKA 299
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A F+R + + +F+ + +D V W +IIS + +
Sbjct: 300 ALEFFQR---------------------MHIACSVFSELSTRDVVVWNSIISACAQSGRS 338
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
A EM +V N +T+ S L A + A L QG +IH +++ +++ I NSL
Sbjct: 339 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSL 398
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ +Y +CG++ + RIF + +R++VS+N MIS + +G G +A+NLF++ + GL PN
Sbjct: 399 IDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNH 458
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
ITF ++LSAC+H GL+EEG+ YFK MKT Y ++P E YACMVD+L RAG E ++ I
Sbjct: 459 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 518
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
M FEP VWG+LLGA R H N DLA+ AA++L ELEP S+ YV+++++YS G+ D
Sbjct: 519 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 578
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
++R K + + K PGCSWI +K K+H F+ G S +++I ++++ KE +
Sbjct: 579 AAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGY 638
Query: 613 -PKHDWSLLGLERD 625
P ++ L ++ D
Sbjct: 639 VPDTNFVLQDVDED 652
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 162/341 (47%), Gaps = 51/341 (14%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C + + R G QVH + G D LG+ ++ +Y + G +++A ++F MS+R+
Sbjct: 16 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 75
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDFVS 267
SW +++ Y G+ EE +LF M GKD
Sbjct: 76 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 135
Query: 268 WTTMITGFSSKGNLEKSI--------------ELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+ I GF ++ SI F + KD W ++SG+ + +++
Sbjct: 136 YMLSI-GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFK 194
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM-NMESDVSIQNSL 372
+A F +M+ + V+PN +T++S +SA + L G +IH + +K+ ++SD+ + NSL
Sbjct: 195 KALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSL 254
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSM--ISGFAQNGLGEEALNLFRKMK------ 424
V Y+KC +V A R F I + ++VS+N+M ++GF Q G G+ AL F++M
Sbjct: 255 VDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVF 314
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
E + + + S++SAC G + M L N+E
Sbjct: 315 SELSTRDVVVWNSIISACAQSGRSVNALDLLREM-NLSNVE 354
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+S+L L G Q+HA +V ++ + + L+ +Y + G V DA R+F + E
Sbjct: 14 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 73
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
RN+ S+ +++ + G EE + LF M +EG+ P+ F V AC+ +
Sbjct: 74 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 124
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 219/628 (34%), Positives = 342/628 (54%), Gaps = 74/628 (11%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNA-----LIS 79
+A IF M +RN VS ++ G V++ A +++ M +D V N+ L+S
Sbjct: 808 DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM----KDLVGINSDSYVVLLS 863
Query: 80 GYLKVGRCEEA--------ARIFEAMVEKDVVAWGS-MVDGYCKKGRVIEAREIFDKMPE 130
+ + EE A + + + VA G+ +V+ Y K G + +A +F+ M E
Sbjct: 864 AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVE 923
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K+ V+W +++ G + +C ED + FL MRR G ++ TL +C G Q+
Sbjct: 924 KDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQI 983
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE- 249
H + G D D+ + N+++ +Y G E KVFS+M + D VSWNS+I G + + E
Sbjct: 984 HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVI-GALSDSEA 1042
Query: 250 -IEEAYRLFERMP----GKDFVSWTTMITGFSS--------------------------- 277
+ +A + F M G V++ +++ SS
Sbjct: 1043 SVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGN 1102
Query: 278 --------KGNLEKSIELFNMMPE-KDDVTWTAIISGFVNNEQYEEAFR--WFIEMLRKD 326
G + + ++F M E +D+V+W ++ISG+++NE +A WF M++K
Sbjct: 1103 ALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWF--MMQKG 1160
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
R + T ++VLSA A+ ATL +G ++HA ++ MESDV + ++LV +YSKCG + A
Sbjct: 1161 QRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYAS 1220
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT-FLSVLSACNHV 445
R F + RN+ S+NSMISG+A++G GE+AL LF +M +G P+ + L VLSAC+HV
Sbjct: 1221 RFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHV 1280
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
G VEEGF +FKSM +Y + P EH++CMVD+LGRAG L E D INSM +P +W
Sbjct: 1281 GFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRT 1340
Query: 506 LLGA-----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
+LGA GR N +L + AA+ L+ELEP +A YV+L+++Y+ K D + R
Sbjct: 1341 VLGACCRANGR---NTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAM 1397
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRK 588
K ++K GCSW+ +KD VH+F+AG K
Sbjct: 1398 KEAAVKKEAGCSWVTMKDGVHVFVAGDK 1425
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 236/488 (48%), Gaps = 59/488 (12%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-SVCSNALISG 80
S +A +F + +RN++S+ ++I+ + RRG A +L+ +M S N G
Sbjct: 698 SANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFG 757
Query: 81 YLKVGRCEEA-----------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
L C AR+ ++ +D+ ++V G+ + G +A+ IF++M
Sbjct: 758 SLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMG 817
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY----R 185
+NVV+ ++ G +K E +F M + + NS + +L A F R
Sbjct: 818 VRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRR 876
Query: 186 EGVQVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
+G +VH V R G D + +GN ++ MY + G + +A VF +M ++D+VSWNSLISG
Sbjct: 877 KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 936
Query: 245 VHNGEIEEAYRLFER------MPGK---------------------------------DF 265
N E+A F R MP D
Sbjct: 937 DQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 996
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE-QYEEAFRWFIEMLR 324
++ ++ G + +++F++MPE D V+W ++I ++E +A ++F+EM+R
Sbjct: 997 SVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMR 1056
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+++T ++LSA ++ + QIHA V+K + D +I N+L+S Y KCG + +
Sbjct: 1057 GGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNE 1116
Query: 385 AYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+IF + E R+ VS+NSMISG+ N L +A++L M +G + TF +VLSAC
Sbjct: 1117 CEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACA 1176
Query: 444 HVGLVEEG 451
V +E G
Sbjct: 1177 SVATLERG 1184
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 150/601 (24%), Positives = 265/601 (44%), Gaps = 90/601 (14%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL--- 82
A ++F M RN V++A +I+G+ + G EA AR+RD V + + + Y
Sbjct: 598 AQKLFDEMSNRNLVTWACLISGYTQNGKPDEA-------CARFRDMVRAGFIPNHYAFGS 650
Query: 83 KVGRCEEAAR------------IFEAMVEKDVVAWGSMVDGYCKKGRVIE----AREIFD 126
+ C+E+ I + DVV ++ Y G ++ AR +FD
Sbjct: 651 ALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMY---GSCLDSANDARSVFD 707
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF----NSITLTILFEACGRFF 182
++ +N ++W +++ Y + +DLF SM++ G+ F N T L A
Sbjct: 708 RIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSV 767
Query: 183 RYREGV--QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ V Q+ V + GF D+ +G+++++ + R G D+A +F M R+ VS N L
Sbjct: 768 DFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGL 827
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFV-----SWTTMITGFS------------------- 276
+ G V + E A ++F M KD V S+ +++ FS
Sbjct: 828 MVGLVKQKQGEAAAKVFHEM--KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHV 885
Query: 277 ---------------------SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
G + + +F +M EKD V+W ++ISG NE E+A
Sbjct: 886 IRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDA 945
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F+ M R P+ TL S LS+ A+ + G QIH +K+ +++DVS+ N+L++L
Sbjct: 946 AESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLAL 1005
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG-EEALNLFRKMKDEGLVPNQIT 434
Y++ G + ++F+ + E + VS+NS+I + + +A+ F +M G +++T
Sbjct: 1006 YAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVT 1065
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F+++LSA + + L E ++ Y + ++ G+ G + E + M
Sbjct: 1066 FINILSAVSSLSLHEVSH-QIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 1124
Query: 495 TFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
+ W +++ H +DL Q L DS T VLS SV +
Sbjct: 1125 SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRL--DSFTFATVLSACASVATLE 1182
Query: 551 R 551
R
Sbjct: 1183 R 1183
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 221/475 (46%), Gaps = 66/475 (13%)
Query: 31 ATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEA 90
T +++ V + T +F + E + ++ R++ S CS +L+ +
Sbjct: 518 CTKSLQDLVDHYKTSTSHCNTTLF-SSSETFESLINRYQGSCCSEEARELHLQSIKYGFV 576
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+F + ++++ Y + G + A+++FD+M +N+V W ++ GY + +
Sbjct: 577 GNLFLS---------NTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPD 627
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRF--FRYREGVQVHGLVSRFGFDYDIILGNS 208
+ F M R G N AC + GVQ+HGL+S+ + D+++ N
Sbjct: 628 EACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNV 687
Query: 209 IITMYGR-LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----- 262
+I+MYG L ++A VF + R+++SWNS+IS Y G+ AY LF M
Sbjct: 688 LISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGF 747
Query: 263 ----------------------------------------KDFVSWTTMITGFSSKGNLE 282
+D + +++GF+ G +
Sbjct: 748 SFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTD 807
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSAS 341
+ +F M ++ V+ ++ G V +Q E A + F EM KD V N + +LSA
Sbjct: 808 DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM--KDLVGINSDSYVVLLSAF 865
Query: 342 AATATLNQ----GSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+ + L + G ++HAHV++ + ++ V+I N LV++Y+K G + DA +F + E++
Sbjct: 866 SEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKD 925
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
VS+NS+ISG QN E+A F +M+ G +P+ T +S LS+C +G + G
Sbjct: 926 SVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLG 980
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 171/397 (43%), Gaps = 78/397 (19%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM----PMRNAVSYAAMITGFVRRGMFYE 56
M ++ S S+N++I+ L N CS +A E F M M + + + ++ G
Sbjct: 921 MVEKDSVSWNSLISGLDQNECS-EDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIML 979
Query: 57 AEELYVNMPARWRDS--VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
E+++ + D+ SNAL++ Y + G E ++F M E D V+W S++
Sbjct: 980 GEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIG---- 1035
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
A+ D V FL M RGG + +T +
Sbjct: 1036 -----------------------ALSDSEASV---SQAVKYFLEMMRGGWGLSRVTFINI 1069
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RD 233
A + Q+H LV ++ D +GN++++ YG+ G M+E K+F+ MS+ RD
Sbjct: 1070 LSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 1129
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIEL-- 287
VSWNS+ISGY+HN + +A L M K D ++ T+++ +S LE+ +E+
Sbjct: 1130 EVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHA 1189
Query: 288 ---------------------------------FNMMPEKDDVTWTAIISGFVNNEQYEE 314
F +MP ++ +W ++ISG+ + E+
Sbjct: 1190 CGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEK 1249
Query: 315 AFRWFIEMLRKDVRPNQLT-LSSVLSASAATATLNQG 350
A + F M+ P+ + L VLSA + + +G
Sbjct: 1250 ALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEG 1286
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 157/336 (46%), Gaps = 21/336 (6%)
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVS----WTTMITGFSSKGNLEKSIELFNMM 291
++ SLI+ Y + EEA L + FV T+I + G+L + +LF+ M
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS--AATATLNQ 349
++ VTW +ISG+ N + +EA F +M+R PN S L A + +
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKC-GNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G QIH + K SDV + N L+S+Y C + DA +F I RN +S+NS+IS ++
Sbjct: 666 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725
Query: 409 QNGLGEEALNLFRKMKDEGL----VPNQITFLSVLS-ACNHVG----LVEEGFIYFKSMK 459
+ G A +LF M+ EGL PN+ TF S+++ AC+ V ++E+ +
Sbjct: 726 RRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSG 785
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
L ++ G + +V R G +A ++ M + G ++G + A
Sbjct: 786 FLQDLYVG----SALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAA 841
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNR 555
K+ + + +L ++ YVVL +S +G R
Sbjct: 842 KVFHE-MKDLVGINSDSYVVLLSAFSEFSVLEEGRR 876
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 202/644 (31%), Positives = 334/644 (51%), Gaps = 51/644 (7%)
Query: 15 ALINNNCSIYEA-FEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PAR 67
A + + CS + A +F MP RN S+ MI G G+F++ + + M P +
Sbjct: 108 AHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDK 167
Query: 68 WRDSVCSNALIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
+ S + I L++G+ A + V+ S+++ Y K G + ++ +F+
Sbjct: 168 FAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVS-TSLLNMYAKLGSIEDSYWVFN 226
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
M E N V+W AM+ G + FDLF+ M+ G N TL + +A G+
Sbjct: 227 MMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNM 286
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS--WNSLISGY 244
G +V S G + ++++G ++I MY + G + +A VF V+ WN++ISGY
Sbjct: 287 GKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGY 346
Query: 245 VHNGEIEEAYRLFERMP----GKDFVSWTTMITG-------------------------- 274
+G +EA L+ +M D ++ ++
Sbjct: 347 SQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMV 406
Query: 275 ----------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+S G LE ++F+ M E+D V+WT +++ + + EEA F M
Sbjct: 407 VSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMRE 466
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ PNQ T SSVL + A+ L G Q+H + K ++++ I+++L+ +Y+KCG++ +
Sbjct: 467 EGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITE 526
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A ++F I +IVS+ ++ISG+AQ+GL E+AL LFR+M+ G+ N +T L VL AC+H
Sbjct: 527 AGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSH 586
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
G+VEEG YF+ M+ Y + P EHYAC++D+LGR G L +A++ I M EP VW
Sbjct: 587 GGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQ 646
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LLG R H N++L ++AA+ ++ + P+ + YV+LS+ Y G DG +R K +
Sbjct: 647 TLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQG 706
Query: 565 IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
++K PG SWI +K +VH F +G + KEI V L+ + + K
Sbjct: 707 VKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 202/445 (45%), Gaps = 74/445 (16%)
Query: 14 TALIN--NNC-SIYEAFEIFATMPMRNAVS--YAAMITGFVRRGMFYEAEELYVNMPARW 68
TALI+ + C S+++A +F T + V+ + AMI+G+ + G EA ELYV M
Sbjct: 307 TALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQM---- 362
Query: 69 RDSVCSNALIS---------GYLKVGRCEEAARIFEAMVEKD------VVAWGSMVDGYC 113
C N + S + + + R+ MV K V ++ D Y
Sbjct: 363 ----CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYS 418
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G + + R++FD+M E+++V+WT +V Y + E+ F MR G A N T +
Sbjct: 419 KCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSS 478
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ +C G QVHGL+ + G D + + +++I MY + G + EA KVF +S D
Sbjct: 479 VLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPD 538
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFN 289
VSW ++ISGY +G +E+A +LF RM + V+ ++ S G +E+ + F
Sbjct: 539 IVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQ 598
Query: 290 MMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAA 343
M + V + II + ++A +E +RK + PN++ ++L
Sbjct: 599 QMEDGYGVVPEMEHYACIIDLLGRVGRLDDA----MEFIRKMPMEPNEMVWQTLLG---- 650
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
G ++H +V + G + A R +I +Y +
Sbjct: 651 ------GCRVHGNV--------------------ELGEI--AARKILSIRPEYSATYVLL 682
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGL 428
+ + + G E+ L+L MKD+G+
Sbjct: 683 SNTYIETGSYEDGLSLRNVMKDQGV 707
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 132/311 (42%), Gaps = 63/311 (20%)
Query: 178 CGRFFRYREGVQVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
C RE VHGLV + F D D+++ + A V+S S
Sbjct: 74 CAEKGSIREAKAVHGLVLKSNFEDKDLMV------------LFNHAAHVYSKCS------ 115
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
E A +F+ MP ++ SWT MI G + G
Sbjct: 116 ------------EFRAACGVFDEMPQRNVFSWTVMIVGSTEHG----------------- 146
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+ + F++F EML + P++ S+++ + +L G +HA
Sbjct: 147 --------------LFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQ 192
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+V + + + SL+++Y+K G++ D+Y +F + E N VS+N+MISG NGL EA
Sbjct: 193 IVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEA 252
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
+LF +MK+ PN T +SV A + V G ++ + IE ++D
Sbjct: 253 FDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMG-KEVQNCASELGIEGNVLVGTALID 311
Query: 477 ILGRAGSLAEA 487
+ + GSL +A
Sbjct: 312 MYSKCGSLHDA 322
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESD--VSIQNSLVSLYSKCGNVVDAYRIFTN 391
L VL A ++ + +H V+K N E + + N +YSKC A +F
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ +RN+ S+ MI G ++GL + F +M + G++P++ + +++ +C + +E G
Sbjct: 127 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 186
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/571 (32%), Positives = 317/571 (55%), Gaps = 40/571 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISG 80
I A E F M R+ VS+ MI + G EA L V M + DS + ++
Sbjct: 210 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTA 269
Query: 81 YLKV-----GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
++ G+ + A++ ++ + D ++++ Y K G EA+ +F+ + ++N V+
Sbjct: 270 CARLFSLGWGK-QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 328
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT ++ G ++ +CF +LF MR MA + L L C G Q+H L
Sbjct: 329 WTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCL 388
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ G + I++ NS+I++ Y G+++ A
Sbjct: 389 KSGHNRAIVVSNSLISL-------------------------------YAKCGDLQNAEF 417
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+F M +D VSWT+MIT +S GN+ K+ E F+ M ++ +TW A++ ++ + E+
Sbjct: 418 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG 477
Query: 316 FRWFIEML-RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
+ + ML +KDV P+ +T ++ A G QI H VK + +VS+ N+ ++
Sbjct: 478 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAIT 537
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSKCG + +A ++F ++ +++VS+N+MI+G++Q+G+G++A F M +G P+ I+
Sbjct: 538 MYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYIS 597
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+++VLS C+H GLV+EG +YF M ++ I PG EH++CMVD+LGRAG L EA DLI+ M
Sbjct: 598 YVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKM 657
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
+P VWGALL A + H N +LA+LAA+H+ EL+ + Y++L+ +YS GK D
Sbjct: 658 PMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSA 717
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+VR + K I+K+PG SW+ +++KVH+F A
Sbjct: 718 QVRKLMRDKGIKKNPGYSWMEVENKVHVFKA 748
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 173/369 (46%), Gaps = 57/369 (15%)
Query: 75 NALISGYLKVGRCEEAARIFEAMV-EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N L+ YL G +A R+ A + E +V+ M++GY K+G + +A E+FD+MP ++V
Sbjct: 59 NTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 118
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+W ++ + R G + +CG Q+ GL
Sbjct: 119 ASWNTLMSD---------------TSRPAGS----------WMSCGALGCRELAPQLLGL 153
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+F F D + +++ M+ R G++D A+++FS + + NS+++GY I+ A
Sbjct: 154 FWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHA 213
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
FE M +D VSW MI S G +
Sbjct: 214 IEYFEDMAERDVVSWNMMIAALSQSGRV-------------------------------R 242
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EA +EM RK VR + T +S L+A A +L G Q+HA V++ + D + ++L+
Sbjct: 243 EALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALI 302
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
LY+KCG+ +A R+F ++ +RN VS+ +I G Q +++ LF +M+ E + +Q
Sbjct: 303 ELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQF 362
Query: 434 TFLSVLSAC 442
+++S C
Sbjct: 363 ALATLISGC 371
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 324 RKDVRPNQLT--LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
R + P+ +T L+ L + + L +H +V + + S V +QN+L+ Y CG
Sbjct: 11 RCRLLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGA 70
Query: 382 VVDAYRIF-TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ DA R+ +I E N++++N M++G+A+ G +A LF +M
Sbjct: 71 LSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRM 113
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/571 (32%), Positives = 317/571 (55%), Gaps = 40/571 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISG 80
I A E F M R+ VS+ MI + G EA L V M + DS + ++
Sbjct: 220 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTA 279
Query: 81 YLKV-----GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
++ G+ + A++ ++ + D ++++ Y K G EA+ +F+ + ++N V+
Sbjct: 280 CARLFSLGWGK-QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 338
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT ++ G ++ +CF +LF MR MA + L L C G Q+H L
Sbjct: 339 WTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCL 398
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ G + I++ NS+I++ Y G+++ A
Sbjct: 399 KSGHNRAIVVSNSLISL-------------------------------YAKCGDLQNAEF 427
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+F M +D VSWT+MIT +S GN+ K+ E F+ M ++ +TW A++ ++ + E+
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG 487
Query: 316 FRWFIEML-RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
+ + ML +KDV P+ +T ++ A G QI H VK + +VS+ N+ ++
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAIT 547
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSKCG + +A ++F ++ +++VS+N+MI+G++Q+G+G++A F M +G P+ I+
Sbjct: 548 MYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYIS 607
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+++VLS C+H GLV+EG +YF M ++ I PG EH++CMVD+LGRAG L EA DLI+ M
Sbjct: 608 YVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKM 667
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
+P VWGALL A + H N +LA+LAA+H+ EL+ + Y++L+ +YS GK D
Sbjct: 668 PMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSA 727
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+VR + K I+K+PG SW+ +++KVH+F A
Sbjct: 728 QVRKLMRDKGIKKNPGYSWMEVENKVHVFKA 758
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 188/370 (50%), Gaps = 33/370 (8%)
Query: 75 NALISGYLKVGRCEEAARIFEAMV-EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N L+ YL G +A R+ A + E +V+ M++GY K+G + +A E+FD+MP ++V
Sbjct: 43 NTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 102
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHG 192
+W ++ GY + F DG + F+SM R G + N+ T + ++CG Q+ G
Sbjct: 103 ASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLG 162
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
L +F F D + +++ M+ R G++D A+++FS + + NS+++GY I+
Sbjct: 163 LFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDH 222
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A FE M +D VSW MI S G +
Sbjct: 223 AIEYFEDMAERDVVSWNMMIAALSQSGRV------------------------------- 251
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA +EM RK VR + T +S L+A A +L G Q+HA V++ + D + ++L
Sbjct: 252 REALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASAL 311
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ LY+KCG+ +A R+F ++ +RN VS+ +I G Q +++ LF +M+ E + +Q
Sbjct: 312 IELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ 371
Query: 433 ITFLSVLSAC 442
+++S C
Sbjct: 372 FALATLISGC 381
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 33/150 (22%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF-TN 391
L+ L + + L +H +V + + S V +QN+L+ Y CG + DA R+ +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD--------------------EGL--- 428
I E N++++N M++G+A+ G +A LF +M +GL
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 429 ---------VPNQITFLSVLSACNHVGLVE 449
+PN TF V+ +C +G E
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRE 155
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/571 (32%), Positives = 317/571 (55%), Gaps = 40/571 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISG 80
I A E F M R+ VS+ MI + G EA L V M + DS + ++
Sbjct: 220 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTA 279
Query: 81 YLKV-----GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
++ G+ + A++ ++ + D ++++ Y K G EA+ +F+ + ++N V+
Sbjct: 280 CARLFSLGWGK-QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVS 338
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT ++ G ++ +CF +LF MR MA + L L C G Q+H L
Sbjct: 339 WTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCL 398
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ G + I++ NS+I++ Y G+++ A
Sbjct: 399 KSGHNRAIVVSNSLISL-------------------------------YAKCGDLQNAEF 427
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+F M +D VSWT+MIT +S GN+ K+ E F+ M ++ +TW A++ ++ + E+
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDG 487
Query: 316 FRWFIEML-RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
+ + ML +KDV P+ +T ++ A G QI H VK + +VS+ N+ ++
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAIT 547
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSKCG + +A ++F ++ +++VS+N+MI+G++Q+G+G++A F M +G P+ I+
Sbjct: 548 MYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYIS 607
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+++VLS C+H GLV+EG +YF M ++ I PG EH++CMVD+LGRAG L EA DLI+ M
Sbjct: 608 YVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKM 667
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
+P VWGALL A + H N +LA+LAA+H+ EL+ + Y++L+ +YS GK D
Sbjct: 668 PMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSA 727
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+VR + K I+K+PG SW+ +++KVH+F A
Sbjct: 728 QVRKLMRDKGIKKNPGYSWMEVENKVHVFKA 758
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 187/370 (50%), Gaps = 33/370 (8%)
Query: 75 NALISGYLKVGRCEEAARIFEAMV-EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N L+ Y G +A R+ A + E +V+ M++GY K+G + +A E+FD+MP ++V
Sbjct: 43 NTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 102
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHG 192
+W ++ GY + F DG + F+SM R G + N+ T + ++CG Q+ G
Sbjct: 103 ASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLG 162
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
L +F F D + +++ M+ R G++D A+++FS + + NS+++GY I+
Sbjct: 163 LFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDH 222
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A FE M +D VSW MI S G +
Sbjct: 223 AIEYFEDMAERDVVSWNMMIAALSQSGRV------------------------------- 251
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA +EM RK VR + T +S L+A A +L G Q+HA V++ + D + ++L
Sbjct: 252 REALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASAL 311
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ LY+KCG+ +A R+F ++ +RN VS+ +I G Q +++ LF +M+ E + +Q
Sbjct: 312 IELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ 371
Query: 433 ITFLSVLSAC 442
+++S C
Sbjct: 372 FALATLISGC 381
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 33/150 (22%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF-TN 391
L+ L + + L +H +V + + S V +QN+L+ Y CG + DA R+ +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD--------------------EGL--- 428
I E N++++N M++G+A+ G +A LF +M +GL
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 429 ---------VPNQITFLSVLSACNHVGLVE 449
+PN TF V+ +C +G E
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRE 155
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 194/601 (32%), Positives = 328/601 (54%), Gaps = 43/601 (7%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGYL 82
IF M ++N VS+ ++++G+ R G+ E L M P + + AL +
Sbjct: 161 IFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESI 220
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
G + A I + E +++ Y K V +A +FD M ++ V W M+ G
Sbjct: 221 IEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGG 280
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
Y + + +GF +F MR G+ + + C + Q+H V + G+++
Sbjct: 281 YAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFA 340
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMM-SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+ +++ Y + +DEA K+FSM + + V+W ++I G+V N E+A LF +M
Sbjct: 341 QDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMS 400
Query: 262 GK----DFVSWTTMITG-------------------------------FSSKGNLEKSIE 286
+ + +++T++ G + GN+ +S
Sbjct: 401 REGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESAR 460
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA-SAATA 345
+F +P KD V W+A+++G E+A FI+++++ V+PN+ T SSV++A S++ A
Sbjct: 461 VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAA 520
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
T+ G QIHA VK + + + ++L+++YSK GN+ A ++FT +ER+IVS+NSMI+
Sbjct: 521 TVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMIT 580
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G+ Q+G ++AL +F+ M+++GL + +TF+ VL+AC H GLVEEG YF M Y+I+
Sbjct: 581 GYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHID 640
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
EHY+CMVD+ RAG +A+D+IN M F P +W LL A R H NL+L KLAA+
Sbjct: 641 KKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEK 700
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
L+ L+P+ A YV+LS++++V G + VR ++++K GCSWI +K+++ FLA
Sbjct: 701 LVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLA 760
Query: 586 G 586
G
Sbjct: 761 G 761
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 141/474 (29%), Positives = 233/474 (49%), Gaps = 53/474 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS---VCSNAL-ISGY 81
A ++F P+++ Y ++ F R EA L+ ++ + S AL + G
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 82 L---KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
L VGR + +E DV S+VD Y K + R IFD+M KNVV+WT+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLE-DVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ GY + ++ L M+ G+ N T + A GVQVH ++ + G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
F++ + N++I MY + + +A VF M RD+V+WN +I GY G E +++F
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295
Query: 259 RM-------------------------------------PGKDFVS--WTTMITGFSSKG 279
RM G +F T ++ +S
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 280 NLEKSIELFNMMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+++++ +LF+M + VTWTA+I GFV N E+A F +M R+ VRPN T S+VL
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL 415
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+ ++ SQ+HA ++K E S+ +L+ Y K GNVV++ R+F +I ++IV
Sbjct: 416 AGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIV 471
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC-NHVGLVEEG 451
++++M++G AQ E+A+ +F ++ EG+ PN+ TF SV++AC + VE G
Sbjct: 472 AWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHG 525
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 149/281 (53%), Gaps = 14/281 (4%)
Query: 22 SIYEAFEIFATM-PMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISG 80
S+ EAF++F+ N V++ AMI GFV+ +A +L+ M R+ V N
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMS---REGVRPNHFTYS 412
Query: 81 YLKVGR-----CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+ G+ + A+I +A EK +++D Y K G V+E+ +F +P K++VA
Sbjct: 413 TVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVA 472
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE-GVQVHGLV 194
W+AM+ G + E ++F+ + + G+ N T + + AC E G Q+H
Sbjct: 473 WSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATA 532
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G + + ++++TMY + G ++ A KVF+ +RD VSWNS+I+GY +G+ ++A
Sbjct: 533 VKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKAL 592
Query: 255 RLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
+F+ M + D V++ ++T + G +E+ + FN+M
Sbjct: 593 EVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 167/400 (41%), Gaps = 85/400 (21%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++FD+ P K++ + ++ + + + + LF + G+ + +TL+ + CG
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F G QVH + GF D+ +G S++ MY M D
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMY---------------MKTED------- 154
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
E+ +F+ M K+ VSWT++++G++ G ++ I L N
Sbjct: 155 ---------FEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLIN----------- 194
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+M + V PN T ++VL A A + + G Q+HA +VK
Sbjct: 195 --------------------QMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
E + N+L+ +Y K V DA +F ++ R+ V++N MI G+A G E +F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294
Query: 421 RKMKDEGLVPNQITFLSVLSACN-----------HVGLVEEGFIYFKSMKTLYNIEPGPE 469
+M+ G+ ++ F + L C+ H G+V+ G+ + + ++T
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRT--------- 345
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
A MV + S+ EA L + W A++G
Sbjct: 346 --ALMV-TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 139/308 (45%), Gaps = 21/308 (6%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
++ + A++ A + ++ E+ +F ++P ++ V+++AM+TG + +A E+++
Sbjct: 436 EKVPSVATALLDAYVKTG-NVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFI 494
Query: 63 NM------PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKD----VVAWGSMVDGY 112
+ P + S NA S V E +I V+ + +++ Y
Sbjct: 495 QLVKEGVKPNEYTFSSVINACSSSAATV---EHGKQIHATAVKSGKSNALCVSSALLTMY 551
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
KKG + A ++F + E+++V+W +M+ GY + + ++F M+ G+ + +T
Sbjct: 552 SKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFI 611
Query: 173 ILFEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS- 230
+ AC EG + ++ + D I + ++ +Y R G D+A + + M
Sbjct: 612 GVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPF 671
Query: 231 KRDAVSWNSLISG-YVH-NGEIEE--AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
W +L++ VH N E+ + A +L P D V + + + GN E+
Sbjct: 672 PASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQP-NDAVGYVLLSNIHAVAGNWEEKAH 730
Query: 287 LFNMMPEK 294
+ +M E+
Sbjct: 731 VRKLMDER 738
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/543 (36%), Positives = 307/543 (56%), Gaps = 36/543 (6%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD--K 127
D V N L++GY++ G EEA R+FE M E++ +A SM+ + +KG V +AR IF+ +
Sbjct: 170 DLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVR 229
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
E+++V+W+AMV Y + + E+ LF+ M+ G+A + + + AC R G
Sbjct: 230 GRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMG 289
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
VHGL + G + + L N++I +Y G
Sbjct: 290 RWVHGLAVKVGVEDYVSLKNALIHLYSSCG------------------------------ 319
Query: 248 GEIEEAYRLFERMPGK--DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
EI +A R+F+ G+ D +SW +MI+G+ G+++ + LF MPEKD V+W+A+ISG
Sbjct: 320 -EIVDARRIFDD-GGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISG 377
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+ +E + EA F EM VRP++ L S +SA ATL+ G IHA++ + ++ +
Sbjct: 378 YAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVN 437
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
V + +L+ +Y KCG V +A +F ++E+ + ++N++I G A NG E++LN+F MK
Sbjct: 438 VILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKK 497
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
G VPN+ITF+ VL AC H+GLV +G YF SM + IE +HY CMVD+LGRAG L
Sbjct: 498 TGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLK 557
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYS 545
EA +LI+SM P WGALLGA R H + ++ + + L++L+PD +V+LS++Y+
Sbjct: 558 EAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYA 617
Query: 546 VIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
G + +R + K+PGCS I VH FLAG K+ + +IE L ++
Sbjct: 618 SKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAA 677
Query: 606 GTK 608
K
Sbjct: 678 KLK 680
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 214/425 (50%), Gaps = 49/425 (11%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFED----GFDLFLSMRRGGMAFNSITLTILFEACG 179
IF+ + N W ++ ++ + + LFL+ +S T IL + C
Sbjct: 60 IFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKP---DSYTYPILLQCCA 116
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
EG Q+H GFD D+ + N+++ +Y G + A +VF D VSWN+
Sbjct: 117 ARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNT 176
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM--PEKDDV 297
L++GYV GE+EEA R+FE MP ++ ++ +MI F KG +EK+ +FN + E+D V
Sbjct: 177 LLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMV 236
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W+A++S + NE EEA F+EM V +++ + S LSA + + G +H
Sbjct: 237 SWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLA 296
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN-------------------------- 391
VK+ +E VS++N+L+ LYS CG +VDA RIF +
Sbjct: 297 VKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDA 356
Query: 392 ------IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+ E+++VS+++MISG+AQ+ EAL LF++M+ G+ P++ +S +SAC H+
Sbjct: 357 EMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHL 416
Query: 446 GLVEEG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
++ G Y K N+ ++D+ + G + A+++ +M E
Sbjct: 417 ATLDLGKWIHAYISRNKLQVNVILS----TTLIDMYMKCGCVENALEVFYAME-EKGVST 471
Query: 503 WGALL 507
W A++
Sbjct: 472 WNAVI 476
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 134/324 (41%), Gaps = 72/324 (22%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+N ++ + + EA +F MP RN ++ +MI F R+G +A ++ + R
Sbjct: 173 SWNTLLAGYVQAG-EVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGR 231
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAM------------------------------ 97
RD V +A++S Y + EEA +F M
Sbjct: 232 ERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRW 291
Query: 98 ---------VEKDVVAWGSMVDGYCKKGRVIEAREIFD---------------------- 126
VE V +++ Y G +++AR IFD
Sbjct: 292 VHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCG 351
Query: 127 ----------KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
MPEK+VV+W+AM+ GY + +CF + LF M+ G+ + L
Sbjct: 352 SIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAIS 411
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
AC G +H +SR ++IL ++I MY + G ++ A +VF M ++ +
Sbjct: 412 ACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVST 471
Query: 237 WNSLISGYVHNGEIEEAYRLFERM 260
WN++I G NG +E++ +F M
Sbjct: 472 WNAVILGLAMNGSVEQSLNMFADM 495
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 141/300 (47%), Gaps = 18/300 (6%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-- 65
S+N+MI+ + SI +A +F +MP ++ VS++AMI+G+ + F EA L+ M
Sbjct: 339 SWNSMISGYLRCG-SIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLH 397
Query: 66 -ARWRDSVCSNALIS----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
R ++ +A+ + L +G+ A I ++ +V+ +++D Y K G V
Sbjct: 398 GVRPDETALVSAISACTHLATLDLGKWIH-AYISRNKLQVNVILSTTLIDMYMKCGCVEN 456
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A E+F M EK V W A++ G E ++F M++ G N IT + AC
Sbjct: 457 ALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRH 516
Query: 181 FFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWN 238
+G + ++ + +I ++ + GR G + EA ++ SM D +W
Sbjct: 517 MGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWG 576
Query: 239 SLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITG-FSSKGNLEKSIELFNMMPE 293
+L+ + + E RL ++ P D + +++ ++SKGN +E+ +M +
Sbjct: 577 ALLGACRKHRDNEMGERLGRKLIQLQPDHD--GFHVLLSNIYASKGNWGNVLEIRGIMAQ 634
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/609 (31%), Positives = 326/609 (53%), Gaps = 59/609 (9%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG------------- 116
D V + L+ Y+ G E RIF+ + + V W +++GY K G
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR 194
Query: 117 -----RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
RV AR++FD++ +++V++W +M+ GY+ E G DLF M G+ + T+
Sbjct: 195 ELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATM 254
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ C G +HG + F ++ L N ++ MY + G ++ A +VF M +
Sbjct: 255 VSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGE 314
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIEL 287
R VSW S+I+GY G + + RLF M + D + TT++ + G LE ++
Sbjct: 315 RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDV 374
Query: 288 FNMMPE-----------------------------------KDDVTWTAIISGFVNNEQY 312
N + E KD V+W +I G+ N
Sbjct: 375 HNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLP 434
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA F+EM + + +PN +T++ +L A A+ A L +G +IH H+++ D + N+L
Sbjct: 435 NEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANAL 493
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V +Y KCG + A +F I E+++VS+ MI+G+ +G G EA+ F +M++ G+ P++
Sbjct: 494 VDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDE 553
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
++F+S+L AC+H GL++EG+ +F M+ IEP EHYAC+VD+L RAG+L++A I
Sbjct: 554 VSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIK 613
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
M EP +WGALL R + ++ LA+ A+H+ ELEP++ YV+L+++Y+ K +
Sbjct: 614 MMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEE 673
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL-QTISKGTKEFD 611
++R + + +RK+PGCSWI +K KVH+F+ G S +IE+ L +T ++ +E
Sbjct: 674 VKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGH 733
Query: 612 WPKHDWSLL 620
+PK ++L+
Sbjct: 734 FPKMRYALI 742
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 185/404 (45%), Gaps = 58/404 (14%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + + C ++G ++H ++ + D +LG+ ++ MY G + E ++F +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 230 SKRDAVSWNSLISGYVHNG------------------EIEEAYRLFERMPGKDFVSWTTM 271
+ WN L++GY G +E A +LF+ + +D +SW +M
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
I+G+ S G EK ++LF +ML + +
Sbjct: 223 ISGYVSNGLSEKGLDLFE-------------------------------QMLLLGINTDL 251
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T+ SV++ + T L G +H + +K + ++++ N L+ +YSK GN+ A ++F
Sbjct: 252 ATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFET 311
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ ER++VS+ SMI+G+A+ GL + ++ LF +M+ EG+ P+ T ++L AC GL+E G
Sbjct: 312 MGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENG 371
Query: 452 ---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
Y K K ++ ++D+ + GS+ +A + + M + W ++G
Sbjct: 372 KDVHNYIKENKMQSDLFVS----NALMDMYAKCGSMGDAHSVFSEMQVKDIVS-WNTMIG 426
Query: 509 A-GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
+ L + L + +P+S T +L S+ +R
Sbjct: 427 GYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALER 470
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 185/433 (42%), Gaps = 79/433 (18%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPM----RNAVSYAAMITGFVRRGMFYE 56
+ DR S+N+MI+ ++N S + ++F M + + + +++ G GM
Sbjct: 211 LGDRDVISWNSMISGYVSNGLS-EKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLL 269
Query: 57 AEEL--YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
L Y + ++ +N L+ Y K G A ++FE M E+ VV+W SM+ GY
Sbjct: 270 GRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGY-- 327
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
ARE M + LF M + G++ + T+T +
Sbjct: 328 ------AREGLSDMSVR-----------------------LFHEMEKEGISPDIFTITTI 358
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
AC G VH + D+ + N+++ MY + G M +A+ VFS M +D
Sbjct: 359 LHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDI 418
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERM---PGKDFVSWTTMITGFSSKGNLEKSIE----- 286
VSWN++I GY N EA LF M + ++ ++ +S LE+ E
Sbjct: 419 VSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHI 478
Query: 287 ------------------------------LFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
LF+M+PEKD V+WT +I+G+ + EA
Sbjct: 479 LRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAI 538
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN--MESDVSIQNSLVS 374
F EM + P++++ S+L A + + L++G ++++ N +E +V
Sbjct: 539 AAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFF-NMMRNNCCIEPKSEHYACIVD 597
Query: 375 LYSKCGNVVDAYR 387
L ++ GN+ AY+
Sbjct: 598 LLARAGNLSKAYK 610
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 172/371 (46%), Gaps = 30/371 (8%)
Query: 19 NNC---------SIYEAFEIFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYV 62
NNC ++ A ++F TM R+ VS+ +MI G+ R G +F+E E+ +
Sbjct: 289 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGI 348
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
+ ++ +G L+ G+ + I E ++ D+ +++D Y K G + +A
Sbjct: 349 SPDIFTITTILHACACTGLLENGK-DVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAH 407
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+F +M K++V+W M+ GY K + +LF+ M+ NSIT+ + AC
Sbjct: 408 SVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKP-NSITMACILPACASLA 466
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G ++HG + R GF D + N+++ MY + G + A +F M+ ++D VSW +I+
Sbjct: 467 ALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIA 526
Query: 243 GYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP-----E 293
GY +G EA F M D VS+ +++ S G L++ FNMM E
Sbjct: 527 GYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIE 586
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+ I+ +A++ FI+M+ + P+ ++L + ++
Sbjct: 587 PKSEHYACIVDLLARAGNLSKAYK-FIKMM--PIEPDATIWGALLCGCRIYHDVKLAEKV 643
Query: 354 HAHVVKMNMES 364
HV ++ E+
Sbjct: 644 AEHVFELEPEN 654
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 124/281 (44%), Gaps = 52/281 (18%)
Query: 316 FRWFIEMLRKDVRPNQ--LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
R +E++ + +P+ T SVL A ++ G +IH+ + ++E D + + LV
Sbjct: 84 LRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLV 143
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV---- 429
+Y CG++ + RIF + + +N +++G+A+ G E+L+LF++M++ G+
Sbjct: 144 FMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVES 203
Query: 430 ----------PNQITFLSVLSACNHVGLVEEGFIYFKSM---------KTLYNIEPGPEH 470
+ I++ S++S GL E+G F+ M T+ ++ G +
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263
Query: 471 ------------YA-------------CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
YA C++D+ ++G+L AI + +M E W +
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTS 322
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
++ AG L + H ME E S + + + L++
Sbjct: 323 MI-AGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHAC 362
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 209/649 (32%), Positives = 346/649 (53%), Gaps = 62/649 (9%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNA-----LISGYLK 83
IF M RNAV+ ++ G R+ EA +++ M +D V NA L+S + +
Sbjct: 307 IFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM----KDLVEINASSYAVLLSAFTE 362
Query: 84 VGRCEEAAR---------IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+E R I A+V+ ++ ++V+ Y K + AR IF MP K+ V
Sbjct: 363 FSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTV 422
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W +++ G + FE+ F +MRR GM + ++ +C G Q+HG
Sbjct: 423 SWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEG 482
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN-GEIEEA 253
+ G D D+ + N+++T+Y M+E KVF +M + D VSWNS I + + +A
Sbjct: 483 IKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQA 542
Query: 254 YRLFERM------PGK---------------------------------DFVSWTTMITG 274
+ F M P + D T++
Sbjct: 543 IKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAF 602
Query: 275 FSSKGNLEKSIELFNMMPEK-DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+ +E +F+ M E+ D+V+W A+ISG+++N +A M++K R + T
Sbjct: 603 YGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFT 662
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L++VLSA A+ ATL +G ++HA ++ +E++V + ++LV +Y+KCG + A R F +
Sbjct: 663 LATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMP 722
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
RNI S+NSMISG+A++G G +AL LF +MK G +P+ +TF+ VLSAC+HVGLV+EGF
Sbjct: 723 VRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFE 782
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG--R 511
+FKSM +Y + P EH++CMVD+LGRAG + + + I +M P +W +LGA
Sbjct: 783 HFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRA 842
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
N +L + AA+ L+ELEP +A YV+LS++++ GK D R+ + ++K GC
Sbjct: 843 NSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGC 902
Query: 572 SWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSL 619
SW+ +KD VH+F+AG ++ + ++I L+ I ++ + P+ ++L
Sbjct: 903 SWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYAL 951
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 245/501 (48%), Gaps = 59/501 (11%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N +++ + + SI +A +F + M+ + S+ ++I+ + RRG A +L+ +M
Sbjct: 181 NVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREAT 240
Query: 70 DSVCSN------ALISGYLKVGRC------EEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
+ C +L++ + C + ARI ++ KD+ ++V G+ + G
Sbjct: 241 ELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGL 300
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ A+ IF++M ++N V ++ G + E+ +F M + + N+ + +L A
Sbjct: 301 IDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSA 359
Query: 178 CGRFFRYRE----GVQVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
F +E G +VH + R D I++GN+++ +Y + +D A +F +M +
Sbjct: 360 FTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSK 419
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM------PGK----------------------- 263
D VSWNS+ISG HN EEA F M P K
Sbjct: 420 DTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIH 479
Query: 264 ----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE-QY 312
D ++T ++ +E+ ++F +MPE D V+W + I +E
Sbjct: 480 GEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASV 539
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
+A ++F+EM++ +PN++T ++LSA ++ + L G QIHA ++K ++ D +I+N+L
Sbjct: 540 LQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTL 599
Query: 373 VSLYSKCGNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
++ Y KC + D IF+ + E R+ VS+N+MISG+ NG+ +A+ L M +G +
Sbjct: 600 LAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLD 659
Query: 432 QITFLSVLSACNHVGLVEEGF 452
T +VLSAC V +E G
Sbjct: 660 DFTLATVLSACASVATLERGM 680
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 208/415 (50%), Gaps = 58/415 (13%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
+I++ + DV ++V+ + + G ++ A+++FD+MP+KN+V+W+ +V GY + ++
Sbjct: 64 QIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDE 123
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRF--FRYREGVQVHGLVSRFGFDYDIILGNSI 209
LF + G+ N + AC + G+++HGL+S+ + D++L N +
Sbjct: 124 ACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVL 183
Query: 210 ITMYGRL-GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------- 260
++MY +D+A +VF + + + SWNS+IS Y G+ A++LF M
Sbjct: 184 MSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELN 243
Query: 261 --PG-----------------------------------KDFVSWTTMITGFSSKGNLEK 283
P KD + +++GF+ G ++
Sbjct: 244 CRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDS 303
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASA 342
+ +F M +++ VT ++ G Q EEA + F EM KD V N + + +LSA
Sbjct: 304 AKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM--KDLVEINASSYAVLLSAFT 361
Query: 343 ATATLNQ----GSQIHAHVVKMNMESDV--SIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+ L + G ++HA++++ N DV I N+LV+LY+KC + +A IF + ++
Sbjct: 362 EFSNLKEGKRKGQEVHAYLIR-NALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKD 420
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
VS+NS+ISG N EEA+ F M+ G+VP++ + +S LS+C +G + G
Sbjct: 421 TVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLG 475
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 225/503 (44%), Gaps = 113/503 (22%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA------------------------ 57
++ A ++F MP +N VS++ +++G+ + GM EA
Sbjct: 89 NLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALR 148
Query: 58 --EELYVNM-------------PARWRDSVCSNALISGYLKV-GRCEEAARIFEAMVEKD 101
+EL NM D V SN L+S Y ++A R+FE + K
Sbjct: 149 ACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKT 208
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
+W S++ YC++G I A ++F M + +++C + + F S+
Sbjct: 209 SASWNSIISVYCRRGDAISAFKLFSSMQREAT-----------ELNCRPNEYT-FCSLVT 256
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+ LT+L + R + + F D+ +G+++++ + R G +D
Sbjct: 257 VACSLVDCGLTLLEQMLAR-------------IEKSSFVKDLYVGSALVSGFARYGLIDS 303
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV-----SWTTMITGFS 276
A +F M R+AV+ N L+ G + EEA ++F+ M KD V S+ +++ F+
Sbjct: 304 AKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM--KDLVEINASSYAVLLSAFT 361
Query: 277 SKGNLEK----------------------------------------SIELFNMMPEKDD 296
NL++ + +F +MP KD
Sbjct: 362 EFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDT 421
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+W +IISG +NE++EEA F M R + P++ ++ S LS+ A+ + G QIH
Sbjct: 422 VSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGE 481
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE-E 415
+K ++ DVS+ N+L++LY++ + + ++F + E + VS+NS I A + +
Sbjct: 482 GIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQ 541
Query: 416 ALNLFRKMKDEGLVPNQITFLSV 438
A+ F +M G PN++TF+++
Sbjct: 542 AIKYFLEMMQAGWKPNRVTFINI 564
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 148/326 (45%), Gaps = 57/326 (17%)
Query: 181 FFRYREGV------QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
+ RYR+ Q+H + + G D+ N+++ ++ R G + A K+F M +++
Sbjct: 46 YNRYRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNL 105
Query: 235 VSWNSLISGYVHNGEIEEAYRLFE------RMP---------------GKDFVSWTTMIT 273
VSW+ L+SGY NG +EA LF +P G + + I
Sbjct: 106 VSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIH 165
Query: 274 GFSSK---------------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
G SK +++ + +F + K +W +IIS +
Sbjct: 166 GLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDA 225
Query: 313 EEAFRWFIEMLRK----DVRPNQLTLSSVLS--ASAATATLNQGSQIHAHVVKMNMESDV 366
AF+ F M R+ + RPN+ T S+++ S L Q+ A + K + D+
Sbjct: 226 ISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDL 285
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ ++LVS +++ G + A IF +D+RN V+ N ++ G A+ GEEA +F++MKD
Sbjct: 286 YVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKD- 344
Query: 427 GLVP-NQITFLSVLSACNHVGLVEEG 451
LV N ++ +LSA ++EG
Sbjct: 345 -LVEINASSYAVLLSAFTEFSNLKEG 369
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR--DSVCSNALISGYLK 83
A F MP+RN S+ +MI+G+ R G +A +L+ M + D V ++S
Sbjct: 714 ASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSH 773
Query: 84 VGRCEEAARIFEAMVEKDVVA-----WGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAWT 137
VG +E F++M E +A + MVD + G V + E MP N + W
Sbjct: 774 VGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWR 833
Query: 138 AMVDGYMKVD 147
++ + +
Sbjct: 834 TILGACCRAN 843
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/623 (32%), Positives = 332/623 (53%), Gaps = 48/623 (7%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---PARWRDS-VCSNALISGYLKV 84
+F M R+ +S+ +I G+V YEA L+ NM P RD + S AL + L V
Sbjct: 79 MFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGV 138
Query: 85 GRC-EEAARIF--EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
C E F ++ + V +++D Y K G++ + +F+KM +NVV+WTA++
Sbjct: 139 NICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIA 198
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G + +G F M R + ++S T I +A G +H + GFD
Sbjct: 199 GLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDE 258
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+ N++ TMY + G D ++F M D VSW +LIS YV GE E A F+RM
Sbjct: 259 SSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMR 318
Query: 262 GKDFVS--------------------W--------------------TTMITGFSSKGNL 281
K +VS W ++IT +S G L
Sbjct: 319 -KSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLL 377
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ + +F+ + KD ++W+ IIS + +EAF + M R+ +PN+ LSSVLS
Sbjct: 378 KSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVC 437
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ A L QG Q+HAH++ + ++ + + ++++S+YSKCG+V +A +IF + +I+S+
Sbjct: 438 GSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWT 497
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MI+G+A++G +EA+NLF K+ GL P+ + F+ VL+ACNH G+V+ GF YF M +
Sbjct: 498 AMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNV 557
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I P EHY C++D+L RAG L+EA +I SM F VW LL A R H ++D +
Sbjct: 558 YRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRW 617
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
A+ L++L+P+SA ++ L+++Y+ G+ ++ +R K K + K G SW+ + D+++
Sbjct: 618 TAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLN 677
Query: 582 LFLAGRKSCLDLKEIEVTLQTIS 604
F+AG ++ + I L+ +S
Sbjct: 678 AFVAGDQAHPQSEHITTVLKLLS 700
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 207/421 (49%), Gaps = 41/421 (9%)
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLT 172
K+G++ +AR +FDKM ++ ++WT ++ GY+ + LF +M G + ++
Sbjct: 69 KQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMIS 128
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ +AC G +HG + G + + + +++I MY ++G +++ +VF M R
Sbjct: 129 VALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTR 188
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDFV 266
+ VSW ++I+G VH G E F M GK
Sbjct: 189 NVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIH 248
Query: 267 SWT-------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+ T T+ T ++ G + + LF M D V+WT +IS +V + E
Sbjct: 249 TQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEE 308
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A F M + V PN+ T ++V+S+ A A G QIH HV+++ + + +S+ NS++
Sbjct: 309 HAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSII 368
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+LYSKCG + A +F I ++I+S++++IS ++Q G +EA + M+ EG PN+
Sbjct: 369 TLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEF 428
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
SVLS C + L+E+G + + I+ ++ ++ + + GS+ EA + N
Sbjct: 429 ALSSVLSVCGSMALLEQGKQVHAHLLCI-GIDHEAMVHSAIISMYSKCGSVQEASKIFNG 487
Query: 494 M 494
M
Sbjct: 488 M 488
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 40/285 (14%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-----P 261
NS + + G + +A +F M+ RD +SW +LI+GYV+ + EA LF M P
Sbjct: 61 NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGP 120
Query: 262 GKDF---------------VSWTTMITGFSSK--------------------GNLEKSIE 286
+D + + ++ GFS K G +E+
Sbjct: 121 QRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCR 180
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+F M ++ V+WTAII+G V+ E +F EM R V + T + L ASA ++
Sbjct: 181 VFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSL 240
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L+ G IH +K + + N+L ++Y+KCG R+F + ++VS+ ++IS
Sbjct: 241 LHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLIST 300
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ Q G E A+ F++M+ + PN+ TF +V+S+C ++ + G
Sbjct: 301 YVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWG 345
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 217/657 (33%), Positives = 336/657 (51%), Gaps = 65/657 (9%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMF--------------YEAEELYVNMPARWRD 70
+A ++F MP+ N VS+ + GF R F YE + +
Sbjct: 56 DASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKL-- 113
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
L+S L A +++ + D +++D Y G V AR++FD +
Sbjct: 114 ------LVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYF 167
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K++V+WT MV Y + C ED LF MR G N+ T++ ++C ++ G V
Sbjct: 168 KDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSV 227
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG + +D D+ +G +++ +Y + G + EA + F M K D + W+ +IS Y + +
Sbjct: 228 HGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKS 287
Query: 251 EEAYRLFERM--------------------------------------PGKD---FVSWT 269
+EA LF RM G D FVS
Sbjct: 288 KEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVS-N 346
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
++ ++ G +E S++LF EK++V W II G+V E+A F ML D++P
Sbjct: 347 ALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQP 406
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
++T SSVL ASA+ L G QIH+ +K D + NSL+ +Y+KCG + DA F
Sbjct: 407 TEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTF 466
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+D+++ VS+N++I G++ +GLG EALNLF M+ PN++TF+ VLSAC++ GL++
Sbjct: 467 DKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLD 526
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+G +FKSM Y IEP EHY CMV +LGR+G EA+ LI + F+P VW ALLGA
Sbjct: 527 KGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGA 586
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
H NLDL K+ AQ ++E+EP +V+LS++Y+ + + VR K K+++K P
Sbjct: 587 CVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEP 646
Query: 570 GCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
G SW+ + VH F G S ++K I L+ + K T++ + P LL +E D
Sbjct: 647 GLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDD 703
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 223/463 (48%), Gaps = 50/463 (10%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D+ A +++ Y G + +A ++FD+MP N V++ + G+ + F+ L L +
Sbjct: 37 DLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLF 96
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
R G N T L + + VH V + G D +G ++I Y G +D
Sbjct: 97 REGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVD 156
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG------------ 262
A +VF + +D VSW +++ Y N E++ LF +M P
Sbjct: 157 AARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCN 216
Query: 263 ---------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
+D ++ ++ G + ++ + F MP+ D + W+
Sbjct: 217 GLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSL 276
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVR-PNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+IS + +++ +EA F M + V PN T +SVL A A+ LN G+QIH+ V+K+
Sbjct: 277 MISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKV 336
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
++S+V + N+L+ +Y+KCG + ++ ++FT E+N V++N++I G+ Q G GE+ALNLF
Sbjct: 337 GLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLF 396
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILG 479
M + P ++T+ SVL A + +E G I+ ++KT+YN + + ++D+
Sbjct: 397 SNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVAN--SLIDMYA 454
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALL------GAGRTHLNL 516
+ G + +A + M + W AL+ G G LNL
Sbjct: 455 KCGRIDDARLTFDKMDKQDEVS-WNALICGYSIHGLGMEALNL 496
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 180/409 (44%), Gaps = 54/409 (13%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H + + G D+ N ++ Y GF+++A+K+F M + VS+ +L G+
Sbjct: 22 GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81
Query: 247 NGEIE-----------EAY-----------RLFERMPGKD------------------FV 266
+ + + E Y +L M D FV
Sbjct: 82 SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
T +I +S GN++ + ++F+ + KD V+WT +++ + N +E++ F +M
Sbjct: 142 G-TALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMG 200
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
RPN T+S+ L + G +H +K+ + D+ + +L+ LY+K G + +A
Sbjct: 201 YRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQ 260
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG-LVPNQITFLSVLSACNHV 445
+ F + + +++ ++ MIS +AQ+ +EAL LF +M+ +VPN TF SVL AC +
Sbjct: 261 QFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASL 320
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
L+ G S ++ ++D+ + G + ++ L T E W
Sbjct: 321 VLLNLGN-QIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGST-EKNEVAWNT 378
Query: 506 L------LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
+ LG G LNL L ++++P T VL S++
Sbjct: 379 IIVGYVQLGDGEKALNLFSNMLG----LDIQPTEVTYSSVLRASASLVA 423
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 167/363 (46%), Gaps = 23/363 (6%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-------PARWRDSVCSN 75
I EA + F MP + + ++ MI+ + + EA EL+ M P + +
Sbjct: 256 IAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQ 315
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
A S L + + + + ++ +V +++D Y K G + + ++F EKN VA
Sbjct: 316 ACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVA 375
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W ++ GY+++ E +LF +M + +T + + A G Q+H L
Sbjct: 376 WNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTI 435
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ ++ D ++ NS+I MY + G +D+A F M K+D VSWN+LI GY +G EA
Sbjct: 436 KTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALN 495
Query: 256 LFERM------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIIS 304
LF+ M P K +++ +++ S+ G L+K F M + + +T ++
Sbjct: 496 LFDMMQQSNSKPNK--LTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVW 553
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
+ Q++EA + E+ +P+ + ++L A L+ G V++M +
Sbjct: 554 LLGRSGQFDEAVKLIGEI---PFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQD 610
Query: 365 DVS 367
D +
Sbjct: 611 DAT 613
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
N G +H H++K D+ QN L++ Y G + DA ++F + N VS+ ++ GF
Sbjct: 20 NAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGF 79
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+++ + A L ++ EG NQ F ++L
Sbjct: 80 SRSHQFQRARRLLLRLFREGYEVNQFVFTTLL 111
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 213/646 (32%), Positives = 334/646 (51%), Gaps = 58/646 (8%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMP---MRNAVSYAAMITGFVRRGMFYEAEELYV 62
S YN++I+ L + + + +A ++F TM R+ VS++AM+ F G ++A +L+V
Sbjct: 97 SVLYNSLIS-LYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFV 155
Query: 63 NM--PARWRDSVCSNALI-----SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
+ C A+I S ++ VGR + E DV S++D + K
Sbjct: 156 EFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 116 GRVIE-AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
E A ++FDKM E NVV WT M+ M++ + FL M G + TL+ +
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL---GFMDEANKVFSMMSK 231
F AC G Q+H R G D+ S++ MY + G +D+ KVF M
Sbjct: 276 FSACAELENLSLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQD 333
Query: 232 RDAVSWNSLISGYVHNGEI-EEAYRLFERMPGKDFVSWT--TMITGFSSKGN-------- 280
+SW +LI+GY+ N + EA LF M + V T + F + GN
Sbjct: 334 HSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGK 393
Query: 281 ------------------------------LEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+E + F + EK+ V++ + G N
Sbjct: 394 QVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+E AF E+ +++ + T +S+LS A +L +G QIH+ V+K+ + + + N
Sbjct: 454 DFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCN 513
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+S+YSKCG++ A R+F+ +D RN++S+ SMI+GFA++G E L F +M EG+ P
Sbjct: 514 ALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKP 573
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
N++T++++LSAC+HVGLV EG+ +F SM + I+P EHYACMVD+L RAG L +A +
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
IN+M F+ VW LGA R H N +L KLAA+ ++E +P+ Y+ LS++Y+ GK
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKW 693
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
+ +R K K + + K GCSWI + DKVH F G S + +I
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQI 739
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 169/340 (49%), Gaps = 51/340 (15%)
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
L L R G +S+T + L ++C R +R G VH + F + D +L NS+I++Y
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYS 108
Query: 215 RLGFMDEANKVFSMM---SKRDAVSWNSLISGYVHNGEIEEAYRLF-------------- 257
+ G + +A VF M KRD VSW+++++ + +NG +A +LF
Sbjct: 109 KSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYC 168
Query: 258 -----ERMPGKDFVSWTTMITGFSSK----------------------GNLEKSIELFNM 290
DFV +I GF K + E + ++F+
Sbjct: 169 YTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M E + VTWT +I+ + EA R+F++M+ ++ TLSSV SA A L+ G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKC---GNVVDAYRIFTNIDERNIVSYNSMISGF 407
Q+H+ ++ + DV + SLV +Y+KC G+V D ++F + + +++S+ ++I+G+
Sbjct: 289 RQLHSWAIRSGLADDV--ECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGY 346
Query: 408 AQN-GLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHV 445
QN L EA+NLF +M +G V PN TF S AC +V
Sbjct: 347 MQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNV 386
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 203/438 (46%), Gaps = 55/438 (12%)
Query: 67 RWRDSVCSNALISG-----YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
R DSV ++L+ + ++G+ A R+ E +E D V + S++ Y K G + +A
Sbjct: 58 RPMDSVTFSSLLKSCIRARHFRLGKLVHA-RLIEFEIEPDSVLYNSLISLYSKSGDLTKA 116
Query: 122 REIFDKM---PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+++F+ M +++VV+W+AM+ + D LF+ G+ N T + AC
Sbjct: 117 KDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRAC 176
Query: 179 GRFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMY--GRLGFMDEANKVFSMMSKRDAV 235
G + G + + G F+ D+ +G S+I M+ G F + A KVF MS+ + V
Sbjct: 177 SNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSF-ENAYKVFDKMSELNVV 235
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMP--------------------------GKDFVSWT 269
+W +I+ + G EA R F M G+ SW
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWA 295
Query: 270 T--------------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY-EE 314
M S+ G+++ ++F+ M + ++WTA+I+G++ N E
Sbjct: 296 IRSGLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATE 355
Query: 315 AFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A F EM+ + V PN T SS A + G Q+ H K + S+ S+ NS++
Sbjct: 356 AINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVI 415
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
S++ KC + DA F ++ E+N+VSYN+ + G +N E A L ++ + L +
Sbjct: 416 SMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAF 475
Query: 434 TFLSVLSACNHVGLVEEG 451
TF S+LS +VG + +G
Sbjct: 476 TFASLLSGVANVGSLRKG 493
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Query: 322 MLRKDVRP-NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M R +RP + +T SS+L + G +HA +++ +E D + NSL+SLYSK G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSG 111
Query: 381 NVVDAYRIFTNID---ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
++ A +F + +R++VS+++M++ F NG +A+ LF + + GLVPN + +
Sbjct: 112 DLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTA 171
Query: 438 VLSACNH-----VGLVEEGFI 453
V+ AC++ VG V GF+
Sbjct: 172 VIRACSNSDFVGVGRVILGFL 192
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/601 (32%), Positives = 328/601 (54%), Gaps = 43/601 (7%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGYL 82
IF M ++N VS+ ++++G+ R G+ E L M P + + AL +
Sbjct: 161 IFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESI 220
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
G + A I + E +++ Y K V +A +FD M ++ V W M+ G
Sbjct: 221 IEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGG 280
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
Y + + +GF +F MR G+ + + C + Q+H V + G+++
Sbjct: 281 YAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFA 340
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMM-SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+ +++ Y + +DEA K+FSM + + V+W ++I G+V N ++A LF +M
Sbjct: 341 QDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMS 400
Query: 262 GK----DFVSWTTMITG-------------------------------FSSKGNLEKSIE 286
+ + +++T++ G + GN+ +S
Sbjct: 401 REGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESAR 460
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA-SAATA 345
+F +P KD V W+A+++G E+A FI+++++ V+PN+ T SSV++A S++ A
Sbjct: 461 VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAA 520
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
T+ G QIHA VK + + + ++L+++YSK GN+ A ++FT +ER+IVS+NSMI+
Sbjct: 521 TVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMIT 580
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G+ Q+G ++AL +F+ M+++GL + +TF+ VL+AC H GLVEEG YF M Y+I+
Sbjct: 581 GYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHID 640
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
EHY+CMVD+ RAG +A+D+IN M F P +W LL A R H NL+L KLAA+
Sbjct: 641 KKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEK 700
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
L+ L+P+ A YV+LS++++V G + VR ++++K GCSWI +K+++ FLA
Sbjct: 701 LVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLA 760
Query: 586 G 586
G
Sbjct: 761 G 761
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 233/474 (49%), Gaps = 53/474 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS---VCSNAL-ISGY 81
A ++F P+++ Y ++ F R EA L+ ++ + S AL + G
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 82 L---KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
L VGR + +E DV S+VD Y K + R IFD+M KNVV+WT+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLE-DVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ GY + ++ L M+ G+ N T + A GVQVH ++ + G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
F++ + N++I MY + + +A VF M RD+V+WN +I GY G E +++F
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295
Query: 259 RM-------------------------------------PGKDFVS--WTTMITGFSSKG 279
RM G +F T ++ +S
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 280 NLEKSIELFNMMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+++++ +LF+M + VTWTA+I GFV N ++A F +M R+ VRPN T S+VL
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL 415
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+ ++ SQ+HA ++K E S+ +L+ Y K GNVV++ R+F +I ++IV
Sbjct: 416 AGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIV 471
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC-NHVGLVEEG 451
++++M++G AQ E+A+ +F ++ EG+ PN+ TF SV++AC + VE G
Sbjct: 472 AWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHG 525
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 149/281 (53%), Gaps = 14/281 (4%)
Query: 22 SIYEAFEIFATM-PMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISG 80
S+ EAF++F+ N V++ AMI GFV+ +A +L+ M R+ V N
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMS---REGVRPNHFTYS 412
Query: 81 YLKVGR-----CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+ G+ + A+I +A EK +++D Y K G V+E+ +F +P K++VA
Sbjct: 413 TVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVA 472
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE-GVQVHGLV 194
W+AM+ G + E ++F+ + + G+ N T + + AC E G Q+H
Sbjct: 473 WSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATA 532
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G + + ++++TMY + G ++ A KVF+ +RD VSWNS+I+GY +G+ ++A
Sbjct: 533 VKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKAL 592
Query: 255 RLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
+F+ M + D V++ ++T + G +E+ + FN+M
Sbjct: 593 EVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 167/400 (41%), Gaps = 85/400 (21%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++FD+ P K++ + ++ + + + + LF + G+ + +TL+ + CG
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F G QVH + GF D+ +G S++ MY M D
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMY---------------MKTED------- 154
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
E+ +F+ M K+ VSWT++++G++ G ++ I L N
Sbjct: 155 ---------FEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLIN----------- 194
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+M + V PN T ++VL A A + + G Q+HA +VK
Sbjct: 195 --------------------QMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
E + N+L+ +Y K V DA +F ++ R+ V++N MI G+A G E +F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294
Query: 421 RKMKDEGLVPNQITFLSVLSACN-----------HVGLVEEGFIYFKSMKTLYNIEPGPE 469
+M+ G+ ++ F + L C+ H G+V+ G+ + + ++T
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRT--------- 345
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
A MV + S+ EA L + W A++G
Sbjct: 346 --ALMV-TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 138/308 (44%), Gaps = 21/308 (6%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
++ + A++ A + ++ E+ +F ++P ++ V+++AM+TG + +A E+++
Sbjct: 436 EKVPSVATALLDAYVKTG-NVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFI 494
Query: 63 NM------PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKD----VVAWGSMVDGY 112
+ P + S NA S V E +I V+ + +++ Y
Sbjct: 495 QLVKEGVKPNEYTFSSVINACSSSAATV---EHGKQIHATAVKSGKSNALCVSSALLTMY 551
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
KKG + A ++F + E+++V+W +M+ GY + + ++F M+ G+ + +T
Sbjct: 552 SKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFI 611
Query: 173 ILFEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS- 230
+ AC EG + ++ + D + ++ +Y R G D+A + + M
Sbjct: 612 GVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPF 671
Query: 231 KRDAVSWNSLISG-YVH-NGEIEE--AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
W +L++ VH N E+ + A +L P D V + + + GN E+
Sbjct: 672 PASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQP-NDAVGYVLLSNIHAVAGNWEEKAH 730
Query: 287 LFNMMPEK 294
+ +M E+
Sbjct: 731 VRKLMDER 738
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 213/651 (32%), Positives = 342/651 (52%), Gaps = 60/651 (9%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
NA+++ + ++ +A+ +F M RN S+ ++ G+ + G+F EA +LY M
Sbjct: 145 NALLSMFVRFG-NLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGV 203
Query: 65 -------PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
P R L+ G E + E DV +++ Y K G
Sbjct: 204 KPDVYTFPCVLRTCGGMPNLVRGR------EIHVHVIRYGFESDVDVVNALITMYVKCGD 257
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
V AR +FDKMP ++ ++W AM+ GY + +G LF M + + + +T+T + A
Sbjct: 258 VNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITA 317
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
C R G Q+HG V R F D + NS+I MY +G ++EA VFS RD VSW
Sbjct: 318 CELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSW 377
Query: 238 NSLISGY---VHNGEIEEAYRLFER---MPG----------------------------- 262
++ISGY + + E Y++ E MP
Sbjct: 378 TAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQ 437
Query: 263 KDFVSWT----TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
K VS++ ++I ++ ++K++E+F+ EK+ V+WT+II G N + EA +
Sbjct: 438 KGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFF 497
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F EM+R+ ++PN +TL VLSA A L G +IHAH ++ + D + N+++ +Y +
Sbjct: 498 FREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVR 556
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG + A++ F ++D + S+N +++G+A+ G G A LF++M + + PN++TF+S+
Sbjct: 557 CGRMEYAWKQFFSVDHE-VTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISI 615
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
L AC+ G+V EG YF SMK Y+I P +HYAC+VD+LGR+G L EA + I M +P
Sbjct: 616 LCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKP 675
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
P VWGALL + R H +++L +LAA+++ + + S Y++LS+LY+ GK VR
Sbjct: 676 DPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRK 735
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+ + PGCSW+ +K VH FL+ +KEI L+ K KE
Sbjct: 736 MMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKE 786
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 203/407 (49%), Gaps = 44/407 (10%)
Query: 88 EEAARIFE----AMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
+E +R++ +M + +++ + + G +++A +F +M ++N+ +W +V GY
Sbjct: 123 KEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGY 182
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
K F++ DL+ M G+ + T + CG G ++H V R+GF+ D+
Sbjct: 183 AKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDV 242
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--- 260
+ N++ITMY + G ++ A VF M RD +SWN++ISGY NG E RLF M
Sbjct: 243 DVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKY 302
Query: 261 -PGKDFVSWTTMITG-----------------------------------FSSKGNLEKS 284
D ++ T++IT +SS G +E++
Sbjct: 303 PVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEA 362
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+F+ +D V+WTA+ISG+ N ++A + M + + P+++T++ VLSA +
Sbjct: 363 ETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCL 422
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L+ G +H + + S + NSL+ +Y+KC + A IF + E+NIVS+ S+I
Sbjct: 423 CNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSII 482
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
G N EAL FR+M L PN +T + VLSAC +G + G
Sbjct: 483 LGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCG 528
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/467 (37%), Positives = 271/467 (58%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A IF ++P N W ++ Y E +F M + + T T ++CG
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F EG Q+HG V + G D+ + N++I +Y G +++A + M +RD VSWN+L
Sbjct: 121 FSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNAL 180
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+S Y G +E A LF+ M ++ SW MI+G+ G LE++ +F P K+ V+W
Sbjct: 181 LSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWN 240
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+I+G+ + ++ E F +M V+P+ TL SVLSA A L+QG +HA++ K
Sbjct: 241 AMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKN 300
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ D + +LV +YSKCG++ A +F + ++I ++NS+ISG + +G G+ AL +F
Sbjct: 301 GISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIF 360
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M EG PN++TF+ VLSAC+ GL++EG F M ++ I+P EHY CMVD+LGR
Sbjct: 361 SEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGR 420
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
G L EA +L+ M + VW +LLGA R H N++LA+ AQ L+EL P ++ +V L
Sbjct: 421 VGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQL 480
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGR 587
S++Y+ +G+ +D VR K + + +RK PGCS I + V+ FLAG
Sbjct: 481 SNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFLAGE 527
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 124/227 (54%), Gaps = 4/227 (1%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
RD V NAL+S Y + G E A +F+ M E++V +W M+ GY G + EAR +F +
Sbjct: 172 RDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGET 231
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P KNVV+W AM+ GY F + LF M+ G+ ++ TL + AC +G
Sbjct: 232 PVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGE 291
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
VH + + G D + +++ MY + G +++A +VF+ ++D +WNS+ISG +G
Sbjct: 292 WVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHG 351
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
+ A ++F M + F V++ +++ S G L++ E+FN+M
Sbjct: 352 SGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLM 398
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 151/364 (41%), Gaps = 95/364 (26%)
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+S H I A+ +F R+P + W T+I ++
Sbjct: 49 VSTNSHAQAIPYAHSIFSRIPNPNSYMWNTIIRAYA------------------------ 84
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
N+ E A F +ML V P++ T + L + + + + +G QIH HV+K
Sbjct: 85 -------NSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKT 137
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ D+ IQN+L+ LY+ CG + DA + + ER++VS+N+++S +A+ GL E A +LF
Sbjct: 138 GLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLF 197
Query: 421 RKMKD---------------------------EGLVPNQITFLSVLSACNHVGLVEEGFI 453
+M + E V N +++ ++++ +H G E +
Sbjct: 198 DEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLV 257
Query: 454 YFKSMK---------TLYNIEPGPEHYA-------------------------CMVDILG 479
F+ M+ TL ++ H +VD+
Sbjct: 258 LFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYS 317
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA-KLAAQHLME-LEPDSATPY 537
+ GS+ +A+++ NS W +++ TH + A ++ ++ L+E +P+ T
Sbjct: 318 KCGSIEKALEVFNS-CLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFV 376
Query: 538 VVLS 541
VLS
Sbjct: 377 CVLS 380
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 9/268 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N MI+ + + EA +F P++N VS+ AMITG+ G F E L
Sbjct: 200 MTERNVESWNFMISGYVGVGL-LEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVL 258
Query: 61 YVNMP-ARWRDSVCS-NALISGYLKVGRCEEA----ARIFEAMVEKDVVAWGSMVDGYCK 114
+ +M A + C+ +++S VG + A I + + D ++VD Y K
Sbjct: 259 FEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSK 318
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + +A E+F+ K++ W +++ G + +F M G N +T +
Sbjct: 319 CGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCV 378
Query: 175 FEACGRFFRYREGVQVHGL-VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
AC R EG ++ L V G I ++ + GR+G ++EA ++ M +++
Sbjct: 379 LSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKE 438
Query: 234 A-VSWNSLISGYVHNGEIEEAYRLFERM 260
A V W SL+ ++G +E A R+ +++
Sbjct: 439 ASVVWESLLGACRNHGNVELAERVAQKL 466
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 10/233 (4%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL---VSLYSKCGNVVDAYRIFTNID 393
+LS + ++++ Q HAH++K + + L VS S + A+ IF+ I
Sbjct: 10 ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIP 69
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF- 452
N +N++I +A + E AL +F +M ++P++ TF L +C VEEG
Sbjct: 70 NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQ 129
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
I+ +KT + ++ ++ + G + +A L++ M E W ALL A
Sbjct: 130 IHGHVLKTGLGDDLFIQN--TLIHLYASCGCIEDARHLLDRM-LERDVVSWNALLSA--- 183
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
+ L +LA E+ + + + Y +G + RV + +K +
Sbjct: 184 YAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNV 236
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 286/518 (55%), Gaps = 40/518 (7%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+V+ Y K G + A ++FD MP++N+V+WTAM+ G + F + F MR G
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ AC G Q+H L +FG ++ +G+++ MY + G M +A KVF
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK------------------------ 263
M +D VSW ++I GY GE EEA F++M +
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF 225
Query: 264 ---------------DFVSWTTMITGFSSKGNLEKSIELFNMMPE-KDDVTWTAIISGFV 307
D + +S G++E + +F + E ++ V++T +I G+V
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYV 285
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
EQ E+ F+E+ R+ + PN+ T SS++ A A A L QG+Q+HA V+K+N + D
Sbjct: 286 ETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPF 345
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ + LV +Y KCG + A + F I + +++NS++S F Q+GLG++A+ +F +M D G
Sbjct: 346 VSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRG 405
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ PN ITF+S+L+ C+H GLVEEG YF SM Y + PG EHY+C++D+LGRAG L EA
Sbjct: 406 VKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEA 465
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ IN M FEP W + LGA R H + ++ KLAA+ L++LEP ++ V+LS++Y+
Sbjct: 466 KEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANE 525
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+ D VRM+ + ++K PG SW+ + K H+F A
Sbjct: 526 RQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGA 563
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 194/382 (50%), Gaps = 47/382 (12%)
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
R R G Q+H L+ G+ L N ++ MY + G +D A K+F M +R+ VSW ++IS
Sbjct: 20 RLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMIS 79
Query: 243 GYVHNGEIEEAYRLF--ERMPGK--DFVSWTTMITGFSSKGNLE---------------- 282
G N + EA R F R+ G+ ++++ I +S G++E
Sbjct: 80 GLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGS 139
Query: 283 -------------------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ ++F MP KD+V+WTA+I G+ ++EEA F +M+
Sbjct: 140 ELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMI 199
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
++V +Q L S L A A G +H+ VVK+ ESD+ + N+L +YSK G++
Sbjct: 200 DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDME 259
Query: 384 DAYRIFTNIDE--RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
A +F ID RN+VSY +I G+ + E+ L++F +++ +G+ PN+ TF S++ A
Sbjct: 260 SASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKA 318
Query: 442 CNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
C + +E+G ++ + MK N + P + +VD+ G+ G L +AI + + +P
Sbjct: 319 CANQAALEQGTQLHAQVMKI--NFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG-DPTE 375
Query: 501 GVWGALLGA-GRTHLNLDLAKL 521
W +L+ G+ L D K+
Sbjct: 376 IAWNSLVSVFGQHGLGKDAIKI 397
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 178/374 (47%), Gaps = 50/374 (13%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
A ++F TMP RN VS+ AMI+G + F EA + M P ++ S A
Sbjct: 58 HALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACA 117
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
S G +++G+ + + + ++ ++ D Y K G + +A ++F++MP K+ V+WT
Sbjct: 118 SLGSIEMGK-QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWT 176
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
AM+DGY K+ FE+ F M + + L ACG + G VH V +
Sbjct: 177 AMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL 236
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDAVSWNSLISGYVHNGEIEEAYRL 256
GF+ DI +GN++ MY + G M+ A+ VF + S+ R+ VS+ LI GYV +IE+ +
Sbjct: 237 GFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSV 296
Query: 257 FERM------PGK----------------------------------DFVSWTTMITGFS 276
F + P + FVS + ++ +
Sbjct: 297 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS-SILVDMYG 355
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G LE++I+ F+ + + ++ W +++S F + ++A + F M+ + V+PN +T S
Sbjct: 356 KCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFIS 415
Query: 337 VLSASAATATLNQG 350
+L+ + + +G
Sbjct: 416 LLTGCSHAGLVEEG 429
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 178/362 (49%), Gaps = 33/362 (9%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA---------EELYVNMPARWRDSV 72
++++A ++F MP ++ VS+ AMI G+ + G F EA EE+ ++ + +
Sbjct: 156 AMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTID-----QHVL 210
Query: 73 CSNALISGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
CS G LK C+ + ++V E D+ ++ D Y K G + A +F
Sbjct: 211 CSTLGACGALKA--CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGID 268
Query: 129 PE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
E +NVV++T ++DGY++ + E G +F+ +RR G+ N T + L +AC +G
Sbjct: 269 SECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQG 328
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
Q+H V + FD D + + ++ MYG+ G +++A + F + ++WNSL+S + +
Sbjct: 329 TQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQH 388
Query: 248 GEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT----- 298
G ++A ++FERM + + +++ +++TG S G +E+ ++ F M + V
Sbjct: 389 GLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEH 448
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
++ +I + +EA + FI R PN S L A G +V
Sbjct: 449 YSCVIDLLGRAGRLKEA-KEFIN--RMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLV 505
Query: 359 KM 360
K+
Sbjct: 506 KL 507
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
L+ V+ A T L +G Q+HA ++ + N LV++YSKCG + A ++F +
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+RN+VS+ +MISG +QN EA+ F M+ G VP Q F S + AC +G +E G
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEE 59
R SY +I + I + +F + + N +++++I + + +
Sbjct: 272 RNVVSYTCLIDGYVETE-QIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQ 330
Query: 60 LYVN-MPARW-RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
L+ M + D S+ L+ Y K G E+A + F+ + + +AW S+V + + G
Sbjct: 331 LHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGL 390
Query: 118 VIEAREIFDKMPEK----NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLT 172
+A +IF++M ++ N + + +++ G E+G D F SM + G+ +
Sbjct: 391 GKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYS 450
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFD 200
+ + GR R +E + ++R F+
Sbjct: 451 CVIDLLGRAGRLKEAKE---FINRMPFE 475
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 191/546 (34%), Positives = 308/546 (56%), Gaps = 28/546 (5%)
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
V M +W V N L+ Y K+GR ++A ++FE M + V+W +MV GY A
Sbjct: 162 VEMGFQWNLHV-GNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGA 220
Query: 122 REIFDKMP----EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
E+F M E N+V WT+++ + + + +LF MR G+ + L ++
Sbjct: 221 SEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSV 280
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
+ EG +HG V + GF+ + + NS+I +YG+ G ++ A +F + ++ VSW
Sbjct: 281 SVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSW 340
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N+LIS Y G +EA+ +F + LEK+ E + P + V
Sbjct: 341 NALISSYADLGWCDEAFAIFLQ---------------------LEKTDEYPMVRP--NVV 377
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W+A+I GF + Q EEA F M V+ N +T++SVLS A A L+ G +IH HV
Sbjct: 378 SWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV 437
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
V+ M+ ++ + N L+++Y+K G+ + +F I+ ++++S+N+M++G+ +GLGE A+
Sbjct: 438 VRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAI 497
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
F +M +G P+ +TF++VLSAC+H GLV EG F M + +EP EHYACMVD+
Sbjct: 498 RTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL 557
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGRAG L EA ++ SM EP VWGALL + R H N ++A+ A + L + A Y
Sbjct: 558 LGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSY 617
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
++LS++Y+ G+ D +VR+ K K ++K+PG SWI +K KV++F AG +L+E+
Sbjct: 618 MLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVY 677
Query: 598 VTLQTI 603
L+ +
Sbjct: 678 RILKDL 683
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
S R A ++S Y G + +A R+FE P IE F+
Sbjct: 62 SHRSAFLAARVVSVYAGFGLVSDAQRVFEVSP-----------------------IECFS 98
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+ + W +I+ V + EEA + M + V + T V+ A A +
Sbjct: 99 NL-----LLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKL 153
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
+H HVV+M + ++ + N L+ +Y K G + DA ++F + R+ VS+N+M+SG+A
Sbjct: 154 CRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 213
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
N A +FR M GL PN +T+ S+LS+ G E F M+
Sbjct: 214 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 263
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF--TNIDE-RNIVSYNSMISGFA 408
QIH+ ++ + +VS+Y+ G V DA R+F + I+ N++ +NS++
Sbjct: 52 QIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANV 111
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG---LVEEGFIYFKSMKTLYNIE 465
+G EEAL ++ +M+ G+ + TF V+ AC +G L + M +N+
Sbjct: 112 AHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLH 171
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMT 495
G E ++ + G+ G + +A + M
Sbjct: 172 VGNE----LMGMYGKIGRMDDARKVFERMA 197
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 196/625 (31%), Positives = 321/625 (51%), Gaps = 74/625 (11%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--VNMPAR 67
NA++T L + + ++ A +IF M R+ VSY ++I+G ++G A L+ +N+ +
Sbjct: 290 NALVT-LYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQ 348
Query: 68 WRDSVCSNALISGYLKVGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
D V +L+S VG + +A + D+V GS++D Y K + A E
Sbjct: 349 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 408
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
F Y ++D F +F M+ G+ N T + + C
Sbjct: 409 FFL---------------CYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGA 453
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G Q+H V + GF +++ + + +I MY + G +D A K+F + + D VSW ++I+G
Sbjct: 454 TDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAG 513
Query: 244 YVHNGEIEEAYRLFERMPGK---------------------------------------D 264
Y + + EA LF+ M + D
Sbjct: 514 YTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDD 573
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+++ ++ G + ++ F+ + KD+V+W +++SGF + +EEA F +M +
Sbjct: 574 LSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNK 633
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ N T S +SA+A A + G QIH + K +S+ + N+L++LY+KCG + D
Sbjct: 634 AGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD 693
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
+S+NSMI+G++Q+G G EAL LF MK ++PN +TF+ VLSAC+H
Sbjct: 694 -------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSH 740
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
VGLV+EG YF+SM +N+ P PEHYAC+VD+LGR+G L+ A + M +P VW
Sbjct: 741 VGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWR 800
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LL A H N+D+ + AA HL+ELEP + YV++S++Y+V GK +R R K +
Sbjct: 801 TLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRG 860
Query: 565 IRKSPGCSWIILKDKVHLFLAGRKS 589
++K PG SW+ + + VH F AG ++
Sbjct: 861 VKKEPGRSWVEVDNSVHAFFAGDQN 885
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 239/508 (47%), Gaps = 68/508 (13%)
Query: 20 NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN---- 75
NC++ +F MP+R+ + + F+ AE L +P +R + N
Sbjct: 114 NCAV----NVFDEMPIRSLSCWNRIFNTFI-------AERLMGRVPGLFRRMLTKNVEFD 162
Query: 76 ----ALI----SGYLKVGRCEEA--ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
A++ SG R E A+ + E ++D Y K G + A+++F
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+ + ++ V+W AM+ G + E+ LF I+ AC + +
Sbjct: 223 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQ--------------IVLSACTKVEFFE 268
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G Q+HGLV + GF + + N+++T+Y R G + A ++F MS+RD VS+NSLISG
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLA 328
Query: 246 HNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
G I A LF++M D V+ ++++ +S G L + F+ K +T
Sbjct: 329 QQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQ-FHSYAIKAGMTSDI 387
Query: 302 IISG---------------------FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
++ G + + ++F+ F +M + + PNQ T S+L
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKT 447
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+ G QIH V+K + +V + + L+ +Y+K G + A +IF + E ++VS+
Sbjct: 448 CTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSW 507
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMK 459
+MI+G+ Q+ EALNLF++M+D+G+ + I F S +SAC + +++G I+ +S
Sbjct: 508 TAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCL 567
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ Y+ + + +V + R G + EA
Sbjct: 568 SGYSDDLSIGN--ALVSLYARCGKVREA 593
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 201/436 (46%), Gaps = 51/436 (11%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++D Y G + A +FD+MP +++ W + + ++ LF M + F+
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162
Query: 168 SITLTILFEAC-GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
++ C G +R Q+H GF+ + N +I +Y + GF+ A KVF
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-----------------ERMPG----KDF 265
+ RD+VSW ++ISG NG EEA LF +++ G + F
Sbjct: 223 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGF 282
Query: 266 VSWT----TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
S T ++T +S GNL + ++F+ M ++D V++ ++ISG A F +
Sbjct: 283 SSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKK 342
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M +P+ +T++S+LSA A+ L G Q H++ +K M SD+ ++ SL+ LY KC +
Sbjct: 343 MNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSD 402
Query: 382 VVDAYRIFT---NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
+ A+ F +D N ++ +F +M+ EG+VPNQ T+ S+
Sbjct: 403 IKTAHEFFLCYGQLDNLN------------------KSFQIFTQMQIEGIVPNQFTYPSI 444
Query: 439 LSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
L C +G + G I+ + +KT + + ++D+ + G L A+ + + E
Sbjct: 445 LKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS--SVLIDMYAKHGKLDHALKIFRRLK-E 501
Query: 498 PPPGVWGALLGAGRTH 513
W A++ H
Sbjct: 502 NDVVSWTAMIAGYTQH 517
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 152/367 (41%), Gaps = 86/367 (23%)
Query: 126 DKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
D++PEK N + A GY+ + M + G+ NS T L E C
Sbjct: 50 DEIPEKENEMDGNASGIGYLHL------------MEQHGVRANSQTFLWLLEGC------ 91
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
L SR +D G +I Y G ++ A VF M R WN + + +
Sbjct: 92 --------LNSRSFYD-----GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTF 138
Query: 245 VHNGEIEEAYRLFERMPGKDF--------------------------VSWTTMITGFSS- 277
+ + LF RM K+ + T+ +GF S
Sbjct: 139 IAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESS 198
Query: 278 -------------KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
G L + ++F + +D V+W A+ISG N EEA F ++
Sbjct: 199 TFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI-- 256
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
VLSA G Q+H V+K S+ + N+LV+LYS+ GN+
Sbjct: 257 ------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSS 304
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A +IF + +R+ VSYNS+ISG AQ G AL LF+KM + P+ +T S+LSAC
Sbjct: 305 AEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACAS 364
Query: 445 VGLVEEG 451
VG + G
Sbjct: 365 VGALPNG 371
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 185/517 (35%), Positives = 290/517 (56%), Gaps = 32/517 (6%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++FD++PE N W AM GY + + +D LF M+ + N T ++ ++C +
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVK 63
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM----------- 229
+EG +VH V + GF + + ++I MY G + A +VF M
Sbjct: 64 INALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAM 123
Query: 230 --------------------SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
+RD V WN++ISGY+ ++ A LF++MP KD +SW
Sbjct: 124 INGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWN 183
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML-RKDVR 328
T++ G++S G++ LF MPE++ +W A+I G+ N + E F ML V
Sbjct: 184 TVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVV 243
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN TL +VLSA A L+ G +H + + +V ++N+L+ +Y+KCG V A +
Sbjct: 244 PNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDV 303
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F ++D ++++S+N++I G A +G G +ALNLF MK G P+ ITF+ +L AC H+GLV
Sbjct: 304 FKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLV 363
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
E+GF YFKSM Y+I P EHY C+VD+LGRAG LA A+D I M E +W ALLG
Sbjct: 364 EDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLG 423
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R + N++LA+LA + L+E EP + YV+LS++Y G+ +D R+++ + +K
Sbjct: 424 ACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKKL 483
Query: 569 PGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
PGCS I + D + F + + + ++I TL+T++K
Sbjct: 484 PGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTK 520
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 137/277 (49%), Gaps = 7/277 (2%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
+I+ A+ +F M RN +++ AMI G++ A L+ P R D V N +ISGY
Sbjct: 101 AIHAAYRVFGEMIERNVIAWTAMINGYITCCDLVTARRLFDLAPER--DIVLWNTMISGY 158
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
++ A +F+ M KDV++W ++++GY G V+ +F++MPE+NV +W A++
Sbjct: 159 IEAKDVIRARELFDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIG 218
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY + CF + F M G N TL + AC R G VH G+
Sbjct: 219 GYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYK 278
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
++ + N+++ MY + G ++ A VF M +D +SWN++I G +G +A LF M
Sbjct: 279 GNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHM 338
Query: 261 P----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
D +++ ++ + G +E F M +
Sbjct: 339 KIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMTD 375
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 60/340 (17%)
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD-------------- 264
M+ A+KVF + + +A WN++ GY N ++ LF +M G D
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 265 --------------------------FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
FV+ TT+I ++S G + + +F M E++ +
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVA-TTLIDMYASGGAIHAAYRVFGEMIERNVIA 119
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA+I+G++ A R F D+ P + VL + + + I A +
Sbjct: 120 WTAMINGYITCCDLVTARRLF------DLAPER---DIVLWNTMISGYIEAKDVIRAREL 170
Query: 359 KMNMES-DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
M + DV N++++ Y+ G+V+ R+F + ERN+ S+N++I G+ +NG E L
Sbjct: 171 FDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVL 230
Query: 418 NLFRKMKDEG-LVPNQITFLSVLSACNHVGLVEEG---FIYFKSMKTLYNIEPGPEHYAC 473
+ F++M +G +VPN T ++VLSAC +G ++ G +Y +S N+
Sbjct: 231 SAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYV----RNA 286
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
++D+ + G + A+D+ SM + W ++G H
Sbjct: 287 LMDMYAKCGVVETALDVFKSMDNKDLIS-WNTIIGGLAVH 325
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 211/584 (36%), Positives = 313/584 (53%), Gaps = 47/584 (8%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN ++ Y K GR A F + E +V ++ +V Y K ++ AR++FD++P+ +
Sbjct: 46 SNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDT 105
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V++ ++ GY LF MR+ G + TL+ L AC R Q+H
Sbjct: 106 VSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCF 163
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDAVSWNSLISGYVHNGEIEE 252
GFD + N+ +T Y + G + EA VF M + RD VSWNS+I Y + E +
Sbjct: 164 SVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAK 223
Query: 253 AYRLFERMPGKDF--------------VSWTTMITGFSSKGNLEK--------------- 283
A L++ M K F S +I G G L K
Sbjct: 224 ALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLID 283
Query: 284 -------------SIELFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEMLRKDVRP 329
S ++F + D V W +ISG+ NE+ EEA + F +M R RP
Sbjct: 284 FYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP 343
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRI 388
+ + V SA + ++ +Q QIH +K ++ S+ +S+ N+L+SLY K GN+ DA +
Sbjct: 344 DDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWV 403
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + E N VS+N MI G+AQ+G G EAL L+++M D G+ PN+ITF++VLSAC H G V
Sbjct: 404 FDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKV 463
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
+EG YF +MK + IEP EHY+CM+D+LGRAG L EA I++M ++P W ALLG
Sbjct: 464 DEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG 523
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R H N+ LA+ AA LM ++P +ATPYV+L+++Y+ K + VR + KRIRK
Sbjct: 524 ACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKK 583
Query: 569 PGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
PGCSWI +K K H+F+A S ++E+ L+ + K K+ +
Sbjct: 584 PGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGY 627
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 185/435 (42%), Gaps = 61/435 (14%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
SYN ++ A ++ I+ A ++F +P + VSY +I+G+ + A L+ M
Sbjct: 76 SYNVIVKAYAKDS-KIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKL 134
Query: 68 W--RDSVCSNALISG------YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
D + LI+ +K C + F++ + + V Y K G +
Sbjct: 135 GFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVN----NAFVTYYSKGGLLR 190
Query: 120 EAREIFDKMPE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EA +F M E ++ V+W +M+ Y + L+ M G + TL + A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD---EANKVFSMMSKRDAV 235
G Q HG + + GF + +G+ +I Y + G D ++ KVF + D V
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 236 SWNSLISGYVHNGEI-EEAYRLFERM------PGK-DFVSWTTMITGFSS---------- 277
WN++ISGY N E+ EEA + F +M P FV T+ + SS
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 278 -----------------------KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
GNL+ + +F+ MPE + V++ +I G+ + E
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK--MNMESDVSIQNSL 372
A + ML + PN++T +VLSA A +++G Q + + +K +E + + +
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG-QEYFNTMKETFKIEPEAEHYSCM 489
Query: 373 VSLYSKCGNVVDAYR 387
+ L + G + +A R
Sbjct: 490 IDLLGRAGKLEEAER 504
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 139/332 (41%), Gaps = 73/332 (21%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H L + L N + +Y + G + A F + + S+N ++ Y
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAI 302
+ +I A +LF+ +P D VS+ T+I+G++ ++ LF M E D T + +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 303 IS-------------------GF-----VNNE---------QYEEAFRWFIEM--LRKDV 327
I+ GF VNN EA F M LR +V
Sbjct: 147 IAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV 206
Query: 328 RPNQLTLS------------------------------SVLSASAATATLNQGSQIHAHV 357
N + ++ SVL+A + L G Q H +
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL 266
Query: 358 VKMNMESDVSIQNSLVSLYSKCG---NVVDAYRIFTNIDERNIVSYNSMISGFAQN-GLG 413
+K + + + L+ YSKCG + D+ ++F I ++V +N+MISG++ N L
Sbjct: 267 IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELS 326
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
EEA+ FR+M+ G P+ +F+ V SAC+++
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T +L S A L G +HA VK + S + N V+LYSKCG + A F +
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+E N+ SYN ++ +A+ + +++ R++ DE P+ +++ +++S
Sbjct: 70 EEPNVFSYNVIVKAYAK----DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAM 125
Query: 453 IYFKSMKTL 461
+ FK M+ L
Sbjct: 126 VLFKRMRKL 134
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--P 65
S N + +L + ++ +A +F MP NAVS+ MI G+ + G EA LY M
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIE 120
+ + A++S G+ +E F M +E + + M+D + G++ E
Sbjct: 442 GIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501
Query: 121 AREIFDKMPEK-NVVAWTAMVDGYMK 145
A D MP K VAW A++ K
Sbjct: 502 AERFIDAMPYKPGSVAWAALLGACRK 527
>gi|357114699|ref|XP_003559133.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 640
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/536 (35%), Positives = 302/536 (56%), Gaps = 23/536 (4%)
Query: 57 AEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
AE LY P R +++GY K GR A R+F+ M+ + VVAW MVD YC+ G
Sbjct: 86 AEALYRAAPEAARGPALDAVMLAGYAKAGRVHRARRLFDGMLTRGVVAWTCMVDAYCRAG 145
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
RV EARE+FD MPE++VV+WTAM+ GY + + ++F M N ++ T++ +
Sbjct: 146 RVSEARELFDAMPERSVVSWTAMMHGYARAGMPREAREMFDRMPE----RNVVSWTVMVK 201
Query: 177 AC--GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
A G +F+ G+ + R + ++ ++ S R G +DEA ++F M R+
Sbjct: 202 AYADGGYFQDAMGL-FDRMPQRNSYSWNAVISGSF-----RAGRVDEAVRLFERMPHRNV 255
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
VSW ++++G NG + A F+ MP KD +W MIT +++ G + ++ LF+ MP K
Sbjct: 256 VSWTAMVTGLAQNGRVSMAREFFDVMPCKDITAWNAMITAYANNGEMNEARRLFDSMPAK 315
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D V+W +I G+ E +EA F++MLR PN TL SVL S ++ + QIH
Sbjct: 316 DLVSWNTVIDGYAKKELKDEASGLFLDMLRSAASPNSTTLISVLVISE---SMVEVVQIH 372
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+ + S+ S+ N+L+++YS+ G++ A+ F ++E++ +++ SMI FA +G
Sbjct: 373 GLATTLGLLSETSLGNALLTMYSRIGDLPSAWLAFKRLEEKDAITWTSMIQAFANHGHAS 432
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
AL F +M + G P+ TF +VLSAC+H GLVEEG F+S++ +Y +E EHY C+
Sbjct: 433 YALQAFAQMLEHGKNPSSTTFTAVLSACSHAGLVEEGKSVFRSIRHVYGLERTIEHYTCL 492
Query: 475 VDILGRAGSLAEAIDLINSMTFEPP----PGVWGALLGAGRTHLNLDLAKLAAQHLMELE 530
+DILGRAG++ EA+D++N+M PP + LLGA H +D A+ + L + +
Sbjct: 493 IDILGRAGNMREAMDVVNAM---PPDICDDAILRTLLGACMMHKEVDAAREVGEVLAKSD 549
Query: 531 PD-SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
P S Y+VL+++ + G + V K +RK+PG S I + + H F +
Sbjct: 550 PSGSGGYYMVLANVLASGGLWDEMADVWKAMKGSNVRKTPGVSQITVDARNHAFFS 605
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 163/342 (47%), Gaps = 70/342 (20%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--- 67
T +++ C + EA E+F MP R+ VS+ AM+ G+ R GM EA E++ MP R
Sbjct: 135 TCMVDAYCRAGRVSEARELFDAMPERSVVSWTAMMHGYARAGMPREAREMFDRMPERNVV 194
Query: 68 -W-------------------------RDSVCSNALISGYLKVGRCEEAARIFEAMVEKD 101
W R+S NA+ISG + GR +EA R+FE M ++
Sbjct: 195 SWTVMVKAYADGGYFQDAMGLFDRMPQRNSYSWNAVISGSFRAGRVDEAVRLFERMPHRN 254
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM---------------------- 139
VV+W +MV G + GRV ARE FD MP K++ AW AM
Sbjct: 255 VVSWTAMVTGLAQNGRVSMAREFFDVMPCKDITAWNAMITAYANNGEMNEARRLFDSMPA 314
Query: 140 ---------VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
+DGY K + ++ LFL M R + NS TL + E VQ+
Sbjct: 315 KDLVSWNTVIDGYAKKELKDEASGLFLDMLRSAASPNSTTLISVLVISESMV---EVVQI 371
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HGL + G + LGN+++TMY R+G + A F + ++DA++W S+I + ++G
Sbjct: 372 HGLATTLGLLSETSLGNALLTMYSRIGDLPSAWLAFKRLEEKDAITWTSMIQAFANHGHA 431
Query: 251 EEAYRLFERM--PGKDFVS--WTTMITGFSSKGNLEKSIELF 288
A + F +M GK+ S +T +++ S G +E+ +F
Sbjct: 432 SYALQAFAQMLEHGKNPSSTTFTAVLSACSHAGLVEEGKSVF 473
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 182/404 (45%), Gaps = 49/404 (12%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCS-NALISGY 81
++ A +F M R V++ M+ + R G EA EL+ MP R SV S A++ GY
Sbjct: 116 VHRARRLFDGMLTRGVVAWTCMVDAYCRAGRVSEARELFDAMPER---SVVSWTAMMHGY 172
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+ G EA +F+ M E++VV+W MV Y G +A +FD+MP++N +W A++
Sbjct: 173 ARAGMPREAREMFDRMPERNVVSWTVMVKAYADGGYFQDAMGLFDRMPQRNSYSWNAVIS 232
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G + ++ LF M + + +T L + GR RE V
Sbjct: 233 GSFRAGRVDEAVRLFERMPHRNVVSWTAMVTGLAQN-GRVSMAREFFDVMPC-------K 284
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM- 260
DI N++IT Y G M+EA ++F M +D VSWN++I GY +EA LF M
Sbjct: 285 DITAWNAMITAYANNGEMNEARRLFDSMPAKDLVSWNTVIDGYAKKELKDEASGLFLDML 344
Query: 261 -----PGKD--------------------------FVSWTT----MITGFSSKGNLEKSI 285
P +S T+ ++T +S G+L +
Sbjct: 345 RSAASPNSTTLISVLVISESMVEVVQIHGLATTLGLLSETSLGNALLTMYSRIGDLPSAW 404
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
F + EKD +TWT++I F N+ A + F +ML P+ T ++VLSA +
Sbjct: 405 LAFKRLEEKDAITWTSMIQAFANHGHASYALQAFAQMLEHGKNPSSTTFTAVLSACSHAG 464
Query: 346 TLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ +G + + + +E + L+ + + GN+ +A +
Sbjct: 465 LVEEGKSVFRSIRHVYGLERTIEHYTCLIDILGRAGNMREAMDV 508
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 285/518 (55%), Gaps = 40/518 (7%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+V+ Y K G + A ++FD MP++N+V+WTAM+ G + F + F MR G
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ AC G Q+H L +FG ++ +G+++ MY + G M +A KVF
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK------------------------ 263
M +D VSW ++I GY GE EEA F++M +
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF 225
Query: 264 ---------------DFVSWTTMITGFSSKGNLEKSIELFNMMPE-KDDVTWTAIISGFV 307
D + +S G++E + +F + E ++ V++T +I G+V
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYV 285
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
EQ E+ F+E+ R+ + PN+ T SS++ A A A L QG+Q+HA V+K+N + D
Sbjct: 286 ETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPF 345
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ + LV +Y KCG + A + F I + +++NS++S F Q+GLG++A+ F +M D G
Sbjct: 346 VSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRG 405
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ PN ITF+S+L+ C+H GLVEEG YF SM Y + PG EHY+C++D+LGRAG L EA
Sbjct: 406 VKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEA 465
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ IN M FEP W + LGA R H + ++ KLAA+ L++LEP ++ V+LS++Y+
Sbjct: 466 KEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANE 525
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+ D VRM+ + ++K PG SW+ + K H+F A
Sbjct: 526 RQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGA 563
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 188/373 (50%), Gaps = 46/373 (12%)
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
R R G Q+H L+ G+ L N ++ MY + G +D A K+F M +R+ VSW ++IS
Sbjct: 20 RLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMIS 79
Query: 243 GYVHNGEIEEAYRLF--ERMPGK--DFVSWTTMITGFSSKGNLE---------------- 282
G N + EA R F R+ G+ ++++ I +S G++E
Sbjct: 80 GLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGS 139
Query: 283 -------------------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ ++F MP KD+V+WTA+I G+ ++EEA F +M+
Sbjct: 140 ELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMI 199
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
++V +Q L S L A A G +H+ VVK+ ESD+ + N+L +YSK G++
Sbjct: 200 DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDME 259
Query: 384 DAYRIFTNIDE--RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
A +F ID RN+VSY +I G+ + E+ L++F +++ +G+ PN+ TF S++ A
Sbjct: 260 SASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKA 318
Query: 442 CNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
C + +E+G ++ + MK N + P + +VD+ G+ G L AI + + +P
Sbjct: 319 CANQAALEQGTQLHAQVMKI--NFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIG-DPTE 375
Query: 501 GVWGALLGAGRTH 513
W +L+ H
Sbjct: 376 IAWNSLVSVFGQH 388
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 178/374 (47%), Gaps = 50/374 (13%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
A ++F TMP RN VS+ AMI+G + F EA + M P ++ S A
Sbjct: 58 HALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACA 117
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
S G +++G+ + + + ++ ++ D Y K G + +A ++F++MP K+ V+WT
Sbjct: 118 SLGSIEMGK-QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWT 176
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
AM+DGY K+ FE+ F M + + L ACG + G VH V +
Sbjct: 177 AMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL 236
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDAVSWNSLISGYVHNGEIEEAYRL 256
GF+ DI +GN++ MY + G M+ A+ VF + S+ R+ VS+ LI GYV +IE+ +
Sbjct: 237 GFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSV 296
Query: 257 FERM------PGK----------------------------------DFVSWTTMITGFS 276
F + P + FVS + ++ +
Sbjct: 297 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS-SILVDMYG 355
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G LE +I+ F+ + + ++ W +++S F + ++A ++F M+ + V+PN +T S
Sbjct: 356 KCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFIS 415
Query: 337 VLSASAATATLNQG 350
+L+ + + +G
Sbjct: 416 LLTGCSHAGLVEEG 429
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 176/362 (48%), Gaps = 33/362 (9%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA---------EELYVNMPARWRDSV 72
++++A ++F MP ++ VS+ AMI G+ + G F EA EE+ ++ + +
Sbjct: 156 AMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTID-----QHVL 210
Query: 73 CSNALISGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
CS G LK C+ + ++V E D+ ++ D Y K G + A +F
Sbjct: 211 CSTLGACGALKA--CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGID 268
Query: 129 PE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
E +NVV++T ++DGY++ + E G +F+ +RR G+ N T + L +AC +G
Sbjct: 269 SECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQG 328
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
Q+H V + FD D + + ++ MYG+ G ++ A + F + ++WNSL+S + +
Sbjct: 329 TQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQH 388
Query: 248 GEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT----- 298
G ++A + FERM + + +++ +++TG S G +E+ ++ F M + V
Sbjct: 389 GLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEH 448
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
++ +I + +EA + FI R PN S L A G +V
Sbjct: 449 YSCVIDLLGRAGRLKEA-KEFIN--RMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLV 505
Query: 359 KM 360
K+
Sbjct: 506 KL 507
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
L+ V+ A T L +G Q+HA ++ + N LV++YSKCG + A ++F +
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+RN+VS+ +MISG +QN EA+ F M+ G VP Q F S + AC +G +E G
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 204/634 (32%), Positives = 328/634 (51%), Gaps = 98/634 (15%)
Query: 29 IFATMPMRNAVSYAAMITGFVRR-------GMFYE-----------AEELYVNMPARWRD 70
+F +P RN VS+ A+ + +V+ G+FYE + VN RD
Sbjct: 214 LFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRD 273
Query: 71 SVCSNALISGYL-KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
S +I GYL K+G + D + ++VD Y K G + +A +F+K+
Sbjct: 274 S-SRGKIIHGYLIKLG------------YDWDPFSANALVDMYAKVGDLADAISVFEKIK 320
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ ++V+W A++ G + + E +L M+R Q
Sbjct: 321 QPDIVSWNAVIAGCVLHEHHEQALELLGQMKR---------------------------Q 353
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + + + D+ + ++ MY + +++A F+++ ++D ++WN++ISGY E
Sbjct: 354 LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWE 413
Query: 250 IEEAYRLFERM-------------------PGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
EA LF M G V + G S K I + N
Sbjct: 414 DMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNS 473
Query: 291 MPEK--------------------DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+ + D V++T++I+ + Q EEA + F+EM +++P+
Sbjct: 474 LIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPD 533
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ SS+L+A A + QG Q+H H++K D+ NSLV++Y+KCG++ DA R F+
Sbjct: 534 RFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFS 593
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ ER IVS+++MI G AQ+G G +AL LF +M EG+ PN IT +SVL ACNH GLV E
Sbjct: 594 ELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTE 653
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
+YF+SM+ L+ +P EHYACM+D+LGRAG + EA++L+N M FE VWGALLGA
Sbjct: 654 AKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAA 713
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H +++L + AA+ L LEP+ + +V+L+++Y+ GK + VR + +++K PG
Sbjct: 714 RIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPG 773
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
SWI +KDKV+ FL G +S +EI L +S
Sbjct: 774 MSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELS 807
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 253/499 (50%), Gaps = 28/499 (5%)
Query: 37 NAVSYAAMITGFVRRGM-------FYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEE 89
+ VS++A+I+G+ + G+ F+E L V SV I L++G+
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVH 180
Query: 90 AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
+ E DV ++V Y K ++++ +FD++PE+NVV+W A+ Y++ D
Sbjct: 181 GVVVVSGF-EGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFC 239
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
+ LF M G+ N +L+ + AC G +HG + + G+D+D N++
Sbjct: 240 GEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANAL 299
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK------ 263
+ MY ++G + +A VF + + D VSWN++I+G V + E+A L +M +
Sbjct: 300 VDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLM 359
Query: 264 ------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
D ++ +S LE + FN++PEKD + W AIISG+ + EA
Sbjct: 360 KMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALS 419
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F+EM ++ + NQ TLS++L ++A ++ Q+H VK SD+ + NSL+ Y
Sbjct: 420 LFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYG 479
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
KC +V DA RIF ++VS+ SMI+ +AQ G GEEAL LF +M+D L P++ S
Sbjct: 480 KCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSS 539
Query: 438 VLSACNHVGLVEEG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+L+AC ++ E+G ++ + +I G +V++ + GS+ +A + +
Sbjct: 540 LLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS----LVNMYAKCGSIDDAGRAFSEL 595
Query: 495 TFEPPPGVWGALLGAGRTH 513
T E W A++G H
Sbjct: 596 T-ERGIVSWSAMIGGLAQH 613
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 204/455 (44%), Gaps = 75/455 (16%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++ T+P + I + +G F Y + ++ C+ + L++
Sbjct: 24 APKLIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQ----CCTTKSLRPGLQI- 78
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
A I ++ + D +++ Y K AR++ D+ E ++V+W+A++ GY +
Sbjct: 79 ----HAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQ 134
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
F M G+ N T + + +AC R G QVHG+V GF+ D+ +
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----- 260
N+++ MY + ++ ++F + +R+ VSWN+L S YV EA LF M
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGI 254
Query: 261 ---------------------PGK-------------DFVSWTTMITGFSSKGNLEKSIE 286
GK D S ++ ++ G+L +I
Sbjct: 255 KPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAIS 314
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+F + + D V+W A+I+G V +E +E+A +M R
Sbjct: 315 VFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR---------------------- 352
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
Q+H+ ++KM+MESD+ + LV +YSKC + DA F + E++++++N++ISG
Sbjct: 353 -----QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISG 407
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
++Q EAL+LF +M EG+ NQ T ++L +
Sbjct: 408 YSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKS 442
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 121/229 (52%), Gaps = 4/229 (1%)
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+L + E D V+W+A+ISG+ N A F EM V+ N+ T SSVL A +
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
L G Q+H VV E DV + N+LV +Y+KC +D+ R+F I ERN+VS+N++ S
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS 231
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNI 464
+ Q EA+ LF +M G+ PN+ + S+++AC + G I+ +K Y+
Sbjct: 232 CYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW 291
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+P + +VD+ + G LA+AI + + +P W A++ H
Sbjct: 292 DPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLH 337
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%)
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ + P ++ S +LS T +L G QIHAH+ K + D SI+N L++LYSKC
Sbjct: 49 KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFG 108
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A ++ E ++VS++++ISG+AQNGLG AL F +M G+ N+ TF SVL AC+
Sbjct: 109 YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
Query: 444 HV 445
V
Sbjct: 169 IV 170
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 127/264 (48%), Gaps = 19/264 (7%)
Query: 12 MITALINN--NCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---- 64
++ +LI++ CS + +A IF + + VS+ +MIT + + G EA +L++ M
Sbjct: 470 VVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME 529
Query: 65 --PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRV 118
P R+ VCS +L++ + E+ ++ +++ D+ A S+V+ Y K G +
Sbjct: 530 LKPDRF---VCS-SLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSI 585
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+A F ++ E+ +V+W+AM+ G + LF M + G++ N ITL + AC
Sbjct: 586 DDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGAC 645
Query: 179 GRFFRYREG-VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVS 236
E + + FGF +I + GR G ++EA ++ + M + +A
Sbjct: 646 NHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASV 705
Query: 237 WNSLISGYVHNGEIEEAYRLFERM 260
W +L+ + ++E R E +
Sbjct: 706 WGALLGAARIHKDVELGRRAAEML 729
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 186/568 (32%), Positives = 309/568 (54%), Gaps = 48/568 (8%)
Query: 59 ELYVNMPARWRDSVCSNALISGYLKVGRC----EEAARIFEAMVEKDVVAWGSMVDGYCK 114
+L VN ++ V + IS G C + A+I +E + S + +
Sbjct: 7 KLAVNQTSKPLHRVVEDKFISLLRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSFITACAR 66
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + AR +FDK + N W AM GY + +C D LF M R G + N T ++
Sbjct: 67 LGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMV 126
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG--FMDEANKVFSMM--- 229
++C +EG +VH +V++ GF + +G ++I MY G F+ +A KVF+ M
Sbjct: 127 VKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDK 186
Query: 230 ----------------------------SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+RD V WN ++SGY+ G++ A LF+RMP
Sbjct: 187 NVFAWTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMP 246
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+D +SW T+++G+++ G +E ++LF MP ++ +W +I G+V N ++EA F
Sbjct: 247 DRDVMSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKR 306
Query: 322 ML-----------RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
ML V PN T+ +VL+A + L G +H + + + ++ + N
Sbjct: 307 MLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGN 366
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+ +Y+KCG + A +F +D ++I+++N++I+G A +G +AL+LF +MK G P
Sbjct: 367 ALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERP 426
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+ +TF+ +LSAC H+GLV G ++F+SM Y+I P EHY CMVD+LGRAG + +A+D+
Sbjct: 427 DGVTFVGILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDI 486
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
+ M EP +W ALLGA R + N+++A+LA Q L+ELEP++ +V++S++Y +G+
Sbjct: 487 VRKMPMEPDAVIWAALLGACRMYKNVEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRS 546
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+D R+++ + RK PGCS I D
Sbjct: 547 QDVARLKVAMRDTGFRKVPGCSVIGCND 574
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 163/355 (45%), Gaps = 57/355 (16%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+ +A+++FA M +N ++ A++ V A L+ P R D V N ++SGY+
Sbjct: 173 VADAYKVFAEMRDKNVFAWTAIVAAHVACRDMVSARRLFDLAPQR--DVVLWNVVVSGYI 230
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
++G A +F+ M ++DV++W +++ GY G V ++F++MP +NV +W ++ G
Sbjct: 231 ELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGG 290
Query: 143 YMKVDCFEDGFDLFLSM-----------RRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
Y++ F++ + F M G + N T+ + AC R G VH
Sbjct: 291 YVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVH 350
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
G+ ++ +GN++I MY + G +++A VF + +D ++WN++I+G +G +
Sbjct: 351 VYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVA 410
Query: 252 EAYRLFERMP-------GKDFVS---------------------------------WTTM 271
+A LFERM G FV + M
Sbjct: 411 DALSLFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCM 470
Query: 272 ITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISG---FVNNEQYEEAFRWFIEM 322
+ G ++K++++ MP E D V W A++ + N E E A + IE+
Sbjct: 471 VDLLGRAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKNVEMAELALQRLIEL 525
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 212/643 (32%), Positives = 318/643 (49%), Gaps = 86/643 (13%)
Query: 14 TALINNNCSIY-------EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA 66
T L+N S Y +A +F +P N SY A+++ R G +A L+ +P
Sbjct: 795 TFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPD 854
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARIFEAMVE--------------------------- 99
D NA+I+ + R +A AM
Sbjct: 855 P--DQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGV 912
Query: 100 ------------KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
KDV +++D Y K EAR +F+ MPE+N+V+W +++ Y +
Sbjct: 913 QVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNG 972
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILG 206
+ LF+SM + G + +TL + AC REG QVH V + F D++L
Sbjct: 973 PVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLS 1032
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
N+++ MY + G A +F+RM + V
Sbjct: 1033 NALVDMYAKC-------------------------------GRTRAARCVFDRMASRSVV 1061
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
S T++ITG++ N+E + +F+ M EK+ + W +I+ + N + EEA R F+ + R+
Sbjct: 1062 SETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRES 1121
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVK------MNMESDVSIQNSLVSLYSKCG 380
V P T +VL+A A L G Q H HV+K ESDV + NSLV +Y K G
Sbjct: 1122 VWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTG 1181
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
++ D ++F + R+ VS+N+MI G AQNG ++AL+LF +M P+ +T + VLS
Sbjct: 1182 SIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLS 1241
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC H GLVEEG YF+SM + I P +HY CM+D+LGRAG L E +LI M+ EP
Sbjct: 1242 ACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDA 1301
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
+W +LLG+ R H N+++ + AA L EL+P ++ PYV+LS++Y+ +GK D RVR
Sbjct: 1302 VLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSM 1361
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K + + K PGCSWI + KV +FLA EI L+ I
Sbjct: 1362 KHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAILRII 1404
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 170/609 (27%), Positives = 279/609 (45%), Gaps = 84/609 (13%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA---RWRDSVCSNALI 78
S+ +A E+F MP+R+ S+ A+IT R G EA L+ NM + R +D+ ++ L
Sbjct: 100 SVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLS 159
Query: 79 SGYLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+ C AR + K +V+ ++VD Y + +AR FD + E N
Sbjct: 160 CCAECLDLC--GARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNA 217
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++W +V Y + D+F M G+ T++ AC EG +H
Sbjct: 218 ISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAF 277
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMD-------------------------------EA 222
V R G+++ + + +S++ MY + G MD +A
Sbjct: 278 VLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADA 337
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM---------------------- 260
+VF M +R+ VSWN++++GY+ + ++ A LF++M
Sbjct: 338 KRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGI 397
Query: 261 ----PGKDFVSWTTMITGFSS------------KGNLEKSIE---LFNMMPEKDDVTWTA 301
G++ ++ FSS K +S E LF M E+D +W +
Sbjct: 398 LDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNS 457
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+ISG+ + E A +M + +V PNQ T SS L+A A L QG QIHA++++
Sbjct: 458 LISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKG 516
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
E D +++ L+ +Y KC + RIF R+++ +NSMI G A +G GE L+LF
Sbjct: 517 YEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFD 576
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
+M+ +G+ + +TFL L +C G V G YF M +I P EHY CM+++LG+
Sbjct: 577 EMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMD-ESIIPRIEHYECMIELLGKH 635
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G + E D + M FEP +W + R + N L + AA+ + + P + +V
Sbjct: 636 GCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQFVATV 695
Query: 542 DLYSVIGKK 550
D S G +
Sbjct: 696 DYESNDGGR 704
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 194/423 (45%), Gaps = 74/423 (17%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G V +ARE+FD MP ++ +W A++ + + LF +M G+ T+ +
Sbjct: 99 GSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVL 158
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
C Q+HG +++ F ++ILG +++ +YG + +A + F + + +A+
Sbjct: 159 SCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAI 218
Query: 236 SWNSLISGYVHNGEIEEAYRLFERM--PGKDFVSWT------------------------ 269
SWN ++ Y G + A +F RM G + +T
Sbjct: 219 SWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFV 278
Query: 270 -------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
+++ ++ G ++ + LFN+ P KD V T+I+SG + + +A
Sbjct: 279 LRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAK 338
Query: 317 RWF------------------------------IEMLRKDVRP-NQLTLSSVLSASAATA 345
R F + +R++ R + +TL SVLSA
Sbjct: 339 RVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGIL 398
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR--IFTNIDERNIVSYNSM 403
+ +G ++HA +K S ++N+LV +YSKCG + A R +F ER+ S+NS+
Sbjct: 399 DIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSL 458
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLY 462
ISG+ ++ + E AL KM+ E + PNQ TF S L+AC ++ L+++G I+ ++ Y
Sbjct: 459 ISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGY 517
Query: 463 NIE 465
I+
Sbjct: 518 EID 520
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 31/253 (12%)
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
F + L N++++ Y RLG + +A +VF + + S+N+L+S + G +A LF
Sbjct: 791 FVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFH 850
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+P + D ++ A+I+ + + +A +
Sbjct: 851 AIP-------------------------------DPDQCSYNAVIAALAQHSRGADALLF 879
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
M D N + +S LSA AA G Q+HA V K DV I ++L+ +Y+K
Sbjct: 880 LAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAK 939
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
C +A R+F + ERNIVS+NS+I+ + QNG EAL LF M G VP+++T SV
Sbjct: 940 CEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASV 999
Query: 439 LSACNHVGLVEEG 451
+SAC + EG
Sbjct: 1000 MSACAGLAADREG 1012
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 9/225 (4%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
I ++ G++ + ELF++MP +D +W AII+ EA F M +RP
Sbjct: 92 IESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKD 151
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T++SVLS A L Q+H H+ K + +S+V + +LV +Y C + DA R F +
Sbjct: 152 ATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDD 211
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
I E N +S+N ++ + G+G+ A+++F +M G+ P T + AC +EEG
Sbjct: 212 ILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEG 271
Query: 452 FIYFKSMKTLYNIEPGPEHY----ACMVDILGRAGSLAEAIDLIN 492
+ + G EH+ + +VD+ + G++ A L N
Sbjct: 272 RCIHA-----FVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFN 311
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 47/304 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMI---TGFVRRGM 53
M +R S+NAM+T I + + A +F M +A++ +++ TG + G
Sbjct: 344 MKERNLVSWNAMLTGYIRSM-DLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGK 402
Query: 54 FYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAAR--IFEAMVEKDVVAWGSMVDG 111
E + + + NAL+ Y K G A R +FE E+D +W S++ G
Sbjct: 403 GEEVHAFAIKC-GFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISG 461
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y + M E + A T M + + N T
Sbjct: 462 YERH-----------SMSEAALYALTKM---------------------QSEVTPNQSTF 489
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ AC F ++G+Q+H + R G++ D IL + +I MY + D + ++F
Sbjct: 490 SSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPS 549
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIEL 287
RD + WNS+I G ++G+ E LF+ M + D V++ + S+G++
Sbjct: 550 RDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSY 609
Query: 288 FNMM 291
F +M
Sbjct: 610 FTLM 613
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N + + CG+V DA +F + R+ S+N++I+ ++ G EAL+LF M G+
Sbjct: 89 NRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIR 148
Query: 430 PNQITFLSVLSAC 442
P T SVLS C
Sbjct: 149 PKDATMASVLSCC 161
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 191/546 (34%), Positives = 308/546 (56%), Gaps = 28/546 (5%)
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
V M +W V N L+ Y K+GR ++A ++FE M + V+W +MV GY A
Sbjct: 162 VEMGFQWNLHV-GNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGA 220
Query: 122 REIFDKMP----EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
E+F M E N+V WT+++ + + + +LF MR G+ + L ++
Sbjct: 221 SEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSV 280
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
+ EG +HG V + GF+ + + NS+I +YG+ G ++ A +F + ++ VSW
Sbjct: 281 SVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSW 340
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N+LIS Y G +EA+ +F + LEK+ E + P + V
Sbjct: 341 NALISSYADLGWCDEAFAIFLQ---------------------LEKTDEYPMVRP--NVV 377
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W+A+I GF + Q EEA F M V+ N +T++SVLS A A L+ G +IH HV
Sbjct: 378 SWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV 437
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
V+ M+ ++ + N L+++Y+K G+ + +F I+ ++++S+N+M++G+ +GLGE A+
Sbjct: 438 VRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAI 497
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
F +M +G P+ +TF++VLSAC+H GLV EG F M + +EP EHYACMVD+
Sbjct: 498 RTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL 557
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGRAG L EA ++ SM EP VWGALL + R H N ++A+ A + L + A Y
Sbjct: 558 LGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSY 617
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
++LS++Y+ G+ D +VR+ K K ++K+PG SWI +K KV++F AG +L+E+
Sbjct: 618 MLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVY 677
Query: 598 VTLQTI 603
L+ +
Sbjct: 678 RILKDL 683
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
S R A ++S Y G + +A R+FE P IE F+
Sbjct: 62 SHRSAFLAARVVSVYAGFGLVSDAQRVFEVSP-----------------------IECFS 98
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+ + W +I+ V + EEA + M + V + T V+ A A +
Sbjct: 99 NL-----LLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKL 153
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
+H HVV+M + ++ + N L+ +Y K G + DA ++F + R+ VS+N+M+SG+A
Sbjct: 154 CRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 213
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
N A +FR M GL PN +T+ S+LS+ G E F M+
Sbjct: 214 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 263
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF--TNIDE-RNIVSYNSMISGFA 408
QIH+ ++ + +VS+Y+ G V DA R+F + I+ N++ +NS++
Sbjct: 52 QIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANV 111
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG---LVEEGFIYFKSMKTLYNIE 465
+G EEAL ++ +M+ G+ + TF V+ AC +G L + M +N+
Sbjct: 112 AHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLH 171
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMT 495
G E ++ + G+ G + +A + M
Sbjct: 172 VGNE----LMGMYGKIGRMDDARKVFERMA 197
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 302/534 (56%), Gaps = 25/534 (4%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP----E 130
N L+ Y K+GR E+A ++F+ M + +V+W +MV GY + A +F +M +
Sbjct: 171 NELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQ 230
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
N V WT+++ + + +++ +LF MR G+ + L ++ C G ++
Sbjct: 231 PNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEI 290
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG V + G++ + + N++I YG+ M +A+KVF + ++ VSWN+LIS Y +G
Sbjct: 291 HGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLC 350
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+EAY F M EKS + + + ++W+A+ISGF
Sbjct: 351 DEAYAAFLHM---------------------EKSDSDDHSLVRPNVISWSAVISGFAYKG 389
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+ E++ F +M V N +T+SSVLS A A LN G ++H + ++ M ++ + N
Sbjct: 390 RGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGN 449
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
L+++Y KCG+ + + +F NI+ R+++S+NS+I G+ +GLGE AL F +M + P
Sbjct: 450 GLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKP 509
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+ ITF+++LSAC+H GLV G F M T + IEP EHYACMVD+LGRAG L EA D+
Sbjct: 510 DNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDI 569
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
+ +M EP VWGALL + R + ++D+ + A ++ L+ +++LS++Y+ G+
Sbjct: 570 VRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRW 629
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
D RVR+ + K ++K PG SWI ++ KV+ F AG L++I V L+ ++
Sbjct: 630 DDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHFGLEDIYVILEELN 683
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI---DERNIVSYNS 402
TL Q Q+H+ +V + L+++Y++ + A ++F I +++ +NS
Sbjct: 43 TLQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNS 102
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
+I +G + AL L+ +M+ G +P+ T V+ AC+ +G Y + +
Sbjct: 103 IIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSS-----YLCRIVHCH 157
Query: 463 NIEPGPEHYACMVDIL----GRAGSLAEAIDLINSMTFEPPPGVWGAL----------LG 508
++ G ++ +V+ L G+ G + +A L + M F W + LG
Sbjct: 158 ALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGM-FVRSIVSWNTMVSGYALNRDSLG 216
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
A R ++L L+P+S T +LS
Sbjct: 217 ASRVFKRMELEG--------LQPNSVTWTSLLS 241
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 190/539 (35%), Positives = 305/539 (56%), Gaps = 28/539 (5%)
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
V M +W V N L+ Y K+GR ++A ++FE M + V+W +MV GY A
Sbjct: 1000 VEMGFQWNLHV-GNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGA 1058
Query: 122 REIFDKMP----EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
E+F M E N+V WT+++ + + + +LF MR G+ + L ++
Sbjct: 1059 SEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSV 1118
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
+ EG +HG V + GF+ + + NS+I +YG+ G ++ A +F + ++ VSW
Sbjct: 1119 SVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSW 1178
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N+LIS Y G +EA+ +F + LEK+ E + P + V
Sbjct: 1179 NALISSYADLGWCDEAFAIFLQ---------------------LEKTDEYPMVRP--NVV 1215
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W+A+I GF + Q EEA F M V+ N +T++SVLS A A L+ G +IH HV
Sbjct: 1216 SWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV 1275
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
V+ M+ ++ + N L+++Y+K G+ + +F I+ ++++S+N+M++G+ +GLGE A+
Sbjct: 1276 VRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAI 1335
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
F +M +G P+ +TF++VLSAC+H GLV EG F M + +EP EHYACMVD+
Sbjct: 1336 RTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL 1395
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGRAG L EA ++ SM EP VWGALL + R H N ++A+ A + L + A Y
Sbjct: 1396 LGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSY 1455
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
++LS++Y+ G+ D +VR+ K K ++K+PG SWI +K KV++F AG +L+E+
Sbjct: 1456 MLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEV 1514
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
S R A ++S Y G + +A R+FE P IE F+
Sbjct: 900 SHRSAFLAARVVSVYAGFGLVSDAQRVFEVSP-----------------------IECFS 936
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+ + W +I+ V + EEA + M + V + T V+ A A +
Sbjct: 937 NL-----LLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKL 991
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
+H HVV+M + ++ + N L+ +Y K G + DA ++F + R+ VS+N+M+SG+A
Sbjct: 992 CRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 1051
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
N A +FR M GL PN +T+ S+LS+ G E F M+
Sbjct: 1052 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMR 1101
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF--TNIDE-RNIVSYNSMISGFA 408
QIH+ ++ + +VS+Y+ G V DA R+F + I+ N++ +NS++
Sbjct: 890 QIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANV 949
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+G EEAL ++ +M+ G+ + TF V+ AC +G
Sbjct: 950 AHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMG 987
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 190/536 (35%), Positives = 288/536 (53%), Gaps = 39/536 (7%)
Query: 112 YCKKGRVIEAREIFDKMPEK--NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI 169
Y K G + +F+ P NVV WT +++ + + F MR G+ N
Sbjct: 142 YAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHF 201
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + + AC EG Q+H L+ + F D + +++ MY + G M A VF M
Sbjct: 202 TFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEM 261
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--GKDFVSWTTMITG------------- 274
R+ VSWNS+I G+V N A +F + G D VS +++++
Sbjct: 262 PHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLSACAGLVELDFGKQV 321
Query: 275 ----------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
+ G E + +LF ++D VTW +I G +
Sbjct: 322 HGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNF 381
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
E+A +F M+R+ V P++ + SS+ ASA+ A L QG+ IH+HV+K + I +SL
Sbjct: 382 EQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSL 441
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V++Y KCG+++DAY++F E N+V + +MI+ F Q+G EA+ LF +M +EG+VP
Sbjct: 442 VTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEY 501
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
ITF+SVLSAC+H G +++GF YF SM ++NI+PG EHYACMVD+LGR G L EA I
Sbjct: 502 ITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIE 561
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
SM FEP VWGALLGA H N+++ + A+ L +LEPD+ Y++LS++Y G +
Sbjct: 562 SMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEE 621
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+ VR + +RK GCSWI +K++ +F A +S +EI LQ + + K
Sbjct: 622 ADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIK 677
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 171/352 (48%), Gaps = 16/352 (4%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ A +F MP RN VS+ +MI GFV+ ++ A ++ + + D V ++++S
Sbjct: 250 SMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLSAC 309
Query: 82 LKVGRCEEAARIFEAMVEKDVVAW----GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ + ++ ++V++ +V S+VD YCK G +A ++F +++VV W
Sbjct: 310 AGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWN 369
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
M+ G + FE F +M R G+ + + + LF A +G +H V +
Sbjct: 370 VMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKT 429
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G + + +S++TMYG+ G M +A +VF + + V W ++I+ + +G EA +LF
Sbjct: 430 GHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLF 489
Query: 258 ERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVN 308
E M + +++++ ++++ S G ++ + FN M ++ + ++
Sbjct: 490 EEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGR 549
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+ EEA R FIE + P+ L ++L A A + G ++ + K+
Sbjct: 550 VGRLEEACR-FIESM--PFEPDSLVWGALLGACGKHANVEMGREVAERLFKL 598
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/520 (22%), Positives = 211/520 (40%), Gaps = 98/520 (18%)
Query: 22 SIYEAFEIFATMPM--RNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNAL 77
SI+ +F T P N V++ +I R ++A + M + + +A+
Sbjct: 147 SIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAI 206
Query: 78 ISGYLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
+ E +I A++ K D +++D Y K G ++ A +FD+MP +N
Sbjct: 207 LPACAHAALLSEGQQI-HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRN 265
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+V+W +M+ G++K + +F + G + ++++ + AC G QVHG
Sbjct: 266 LVSWNSMIVGFVKNKLYGRAIGVFREVLSLGP--DQVSISSVLSACAGLVELDFGKQVHG 323
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ + G + + NS++ MY + G ++A K+F RD V+WN +I G E+
Sbjct: 324 SIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQ 383
Query: 253 AYRLFERMPGK----DFVSW-----------------------------------TTMIT 273
A F+ M + D S+ ++++T
Sbjct: 384 ACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVT 443
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+ G++ + ++F E + V WTA+I+ F + EA + F EML + V P +T
Sbjct: 444 MYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYIT 503
Query: 334 LSSVLSASAATATLNQG-----SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
SVLSA + T ++ G S + H +K +E
Sbjct: 504 FVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLE------------------------- 538
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
Y M+ + G EEA M E P+ + + ++L AC V
Sbjct: 539 ----------HYACMVDLLGRVGRLEEACRFIESMPFE---PDSLVWGALLGACGKHANV 585
Query: 449 EEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAGSLAEA 487
E G + + L+ +EP P +Y + +I R G L EA
Sbjct: 586 EMG---REVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEA 622
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 107/185 (57%), Gaps = 6/185 (3%)
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDD--VTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T++ ++ G++ ++ LFN P VTWT +I+ + + +A +F M +
Sbjct: 137 TLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGI 196
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
PN T S++L A A A L++G QIHA + K +D + +L+ +Y+KCG+++ A
Sbjct: 197 YPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAEN 256
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + RN+VS+NSMI GF +N L A+ +FR++ G P+Q++ SVLSAC GL
Sbjct: 257 VFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSAC--AGL 312
Query: 448 VEEGF 452
VE F
Sbjct: 313 VELDF 317
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L +L+ +A +L +QIH+ +V N + ++ N+L+ LY+KCG++ +F
Sbjct: 100 LKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYP 159
Query: 394 E--RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
N+V++ ++I+ +++ +AL F +M+ G+ PN TF ++L AC H L+ EG
Sbjct: 160 HPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEG 219
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
++ + P ++D+ + GS+ A ++ + M
Sbjct: 220 -QQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEM 261
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 197/558 (35%), Positives = 311/558 (55%), Gaps = 43/558 (7%)
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK-KGRVIEAREI 124
AR R S A ++ ++ G A F + K + ++ GY + GR+ +AR +
Sbjct: 12 ARSRARSLSTAAVAAAVRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHL 71
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD++P +VV++ ++ + + LF SM
Sbjct: 72 FDRIPTPDVVSYNTLLLCHFASGDADGARRLFASMPV----------------------- 108
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
D+ N++++ + G ++EA VF M R++VSWN+++SG+
Sbjct: 109 ----------------RDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGF 152
Query: 245 VHNGEIEEAYRLFERMPGK-DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
+G++ A F P K D V WT M++G+ GN+ K+I+ F MP ++ V+W A++
Sbjct: 153 ACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVV 212
Query: 304 SGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
+G+V N ++A R F M+R+ +V+PN TLSSVL + + L G QIH +K+ +
Sbjct: 213 AGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLL 272
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
++++ SLVS+Y KCG++ A +F + R++V++N+MISG+AQ+G G+EA+NLF +
Sbjct: 273 SRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFER 332
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
MKDEG+ PN ITF+ VL+AC H GL + G F+ M+ LY IEP +HY+CMVD+L RAG
Sbjct: 333 MKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAG 392
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L A+D I SM FEP P +G LL A R + NL+ A+LAA L+E +P SA YV L++
Sbjct: 393 KLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLAN 452
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQT 602
+Y+V + D +RVR K + K+PG SWI +K +H F + + L I L
Sbjct: 453 IYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQ 512
Query: 603 ISKGTKEFDW-PKHDWSL 619
+++ KE + P D+ L
Sbjct: 513 LAERMKEMGYVPDLDFVL 530
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 149/274 (54%), Gaps = 8/274 (2%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +FA+MP+R+ S+ M++G + G EA+ +++ MP R +SV NA++SG+ G
Sbjct: 99 ARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVR--NSVSWNAMVSGFACSG 156
Query: 86 RCEEAARIFEAMVEK-DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
A F EK D V W +MV GY G V++A + F+ MP +N+V+W A+V GY+
Sbjct: 157 DMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYV 216
Query: 145 KVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
K +D LF +M R + N+ TL+ + C G Q+H + ++
Sbjct: 217 KNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNL 276
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+G S+++MY + G + A +F M RD V+WN++ISGY +G+ +EA LFERM +
Sbjct: 277 TVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDE 336
Query: 264 ----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
+++++ ++T G + I+ F M E
Sbjct: 337 GVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQE 370
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 181/458 (39%), Gaps = 114/458 (24%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRR-GMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
A E F + P + +Y ++ G+ R G +A L+ +P D V N L+ +
Sbjct: 36 AEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTP--DVVSYNTLLLCHFAS 93
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
G + A R+F +M +DV +W +MV G K G V EA+ +F MP +N V+W AMV G+
Sbjct: 94 GDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFA 153
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
C D +FR + D +
Sbjct: 154 ---CSGD-----------------------MSTAEEWFRNAPEKE------------DAV 175
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--- 261
L ++++ Y +G + +A K F M R+ VSWN++++GYV N ++A RLF M
Sbjct: 176 LWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREA 235
Query: 262 ------------------------GKDFVSW-------------TTMITGFSSKGNLEKS 284
GK W T++++ + G+L +
Sbjct: 236 NVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSA 295
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
LF M +D V W A+ISG+ + +EA F M + V PN +T VL+A T
Sbjct: 296 CILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHT 355
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+ G Q + ++ Y I +D Y+ M+
Sbjct: 356 GLCDFGIQCFEGMQEL-------------------------YGIEPRVDH-----YSCMV 385
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ G E A++ R M E P+ + ++L+AC
Sbjct: 386 DLLCRAGKLERAVDFIRSMPFE---PHPSAYGTLLAAC 420
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 16/129 (12%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP----- 65
T+L++ C + A +F M R+ V++ AMI+G+ + G EA L+ M
Sbjct: 280 TSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVE 339
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIE 120
W V +++ + G C+ + FE M +E V + MVD C+ G++
Sbjct: 340 PNWITFV---VVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLER 396
Query: 121 AREIFDKMP 129
A + MP
Sbjct: 397 AVDFIRSMP 405
>gi|224071603|ref|XP_002303536.1| predicted protein [Populus trichocarpa]
gi|222840968|gb|EEE78515.1| predicted protein [Populus trichocarpa]
Length = 596
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 199/554 (35%), Positives = 313/554 (56%), Gaps = 48/554 (8%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGY 81
I +P ++ S+ I F ++G F EA LYV M P+ + S A
Sbjct: 79 SILYHLPHPDSFSWGWAIRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRAYARTT 138
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
K+G A ++ V ++VD Y K G + A+++FD++ EKNVV+W +++
Sbjct: 139 YKMGGMSIHAESYKYGFSNCVYVQTALVDLYSKLGDMNTAQKVFDELAEKNVVSWNSILS 198
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G++K G E +V +S+
Sbjct: 199 GHLK--------------------------------SGNLL---EAQRVFDQISK----K 219
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D+I NS+I+ Y ++G MD A +F M +++ SWN+LISGYV+ G+I+ A+R F+ MP
Sbjct: 220 DVISWNSMISGYAKIGDMDRACVLFQQMPEKNYSSWNALISGYVNCGDIKSAWRFFDAMP 279
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
++ VSW TMI G+S G+++ + +LF+ + +KD +T+ A+IS F N Q +A F E
Sbjct: 280 ERNSVSWITMIAGYSKCGDVDSASKLFDQIAKKDLLTFNAMISCFAQNSQPRKALWLFSE 339
Query: 322 MLRK--DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
ML+ +++P+Q+TL+SV+SA + L S I ++V + E D + +L+ LY+KC
Sbjct: 340 MLKAYANIQPDQMTLASVVSACSQLGDLRFASWIESYVNDLGTEIDDQLVTALLDLYAKC 399
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G+V AY +F ++++++V+Y++MISG NG +A+ LF M D + PN TF +L
Sbjct: 400 GSVDKAYELFHGLNKKDVVAYSAMISGCGINGKVADAIKLFDMMVDAQIHPNLATFTGLL 459
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
+ACNH GLV+EG+ +F SMK + + P +HYA MVD+LGRAG L +A +LI SM +P
Sbjct: 460 TACNHAGLVKEGYRFFSSMKD-HGLVPSTDHYAIMVDLLGRAGRLQDAYELIKSMPMQPH 518
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
GVWGALL A H N++L ++AAQH LE ++ Y +L+++YS G+ D R+R
Sbjct: 519 SGVWGALLLACNVHNNVELGEIAAQHCFNLETNATAYYSLLANIYSSAGRWDDVGRLRKL 578
Query: 560 KKLKRIRKSPGCSW 573
K K++ K GCSW
Sbjct: 579 WKEKKLAKLSGCSW 592
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 204/399 (51%), Gaps = 19/399 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+A++ S+N++++ + + ++ EA +F + ++ +S+ +MI+G+ + G A L
Sbjct: 185 LAEKNVVSWNSILSGHLKSG-NLLEAQRVFDQISKKDVISWNSMISGYAKIGDMDRACVL 243
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP + S NALISGY+ G + A R F+AM E++ V+W +M+ GY K G V
Sbjct: 244 FQQMPEKNYSSW--NALISGYVNCGDIKSAWRFFDAMPERNSVSWITMIAGYSKCGDVDS 301
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR--GGMAFNSITLTILFEAC 178
A ++FD++ +K+++ + AM+ + + LF M + + + +TL + AC
Sbjct: 302 ASKLFDQIAKKDLLTFNAMISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLASVVSAC 361
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ R + V+ G + D L +++ +Y + G +D+A ++F ++K+D V+++
Sbjct: 362 SQLGDLRFASWIESYVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKKDVVAYS 421
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
++ISG NG++ +A +LF+ M + ++T ++T + G +++ F+ M +
Sbjct: 422 AMISGCGINGKVADAIKLFDMMVDAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSMKDH 481
Query: 295 DDVTWT---AIISGFVNNE-QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
V T AI+ + + ++A+ M ++P+ ++L A + G
Sbjct: 482 GLVPSTDHYAIMVDLLGRAGRLQDAYELIKSM---PMQPHSGVWGALLLACNVHNNVELG 538
Query: 351 SQIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRI 388
H N+E++ + SL++ +YS G D R+
Sbjct: 539 EIAAQHC--FNLETNATAYYSLLANIYSSAGRWDDVGRL 575
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/629 (31%), Positives = 337/629 (53%), Gaps = 59/629 (9%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
N I ++ S+ +A E+F MP RN VSY ++ITG+ + G EA LY+ M
Sbjct: 102 NNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADL 161
Query: 65 -PARWR-DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
P ++ S+ +G + +G+ + A++ + ++A +++ Y + ++ +A
Sbjct: 162 VPDQFAFGSIIKACACAGDVVLGK-QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDAS 220
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL-FLSMRRGGMAF-----NSITLTILFE 176
++F +P K++++W++++ G+ ++ GF+ LS + ++F N +
Sbjct: 221 KVFYGIPAKDLISWSSIIAGFSQL-----GFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 275
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
AC R G Q+HGL + + I G S+ MY R GF+D A +VF+ + + D S
Sbjct: 276 ACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTAS 335
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVS----------------------------- 267
WN +I+G +NG +EA +F M F+
Sbjct: 336 WNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFII 395
Query: 268 ----------WTTMITGFSSKGNLEKSIELFNMMPEK-DDVTWTAIISGFVNNEQYEEAF 316
+++T ++ +L LF K D V+W AI++ + +EQ E
Sbjct: 396 KCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEML 455
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
R F ML + P+ +T+ ++L ++L GSQ+H + K + + I+N L+ +Y
Sbjct: 456 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMY 515
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+KCG++ A RIF ++D ++VS++++I G+AQ+G GEEAL LFR+MK G+ PN +TF+
Sbjct: 516 AKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFV 575
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
VL+AC+HVGLVEEG + M+T + I P EH +C+VD+L RAG L EA I+ M
Sbjct: 576 GVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKL 635
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
EP VW LL A +T N+DLA+ AA+++++++P ++T +V+L +++ G D +
Sbjct: 636 EPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDAALL 695
Query: 557 RMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
R K ++K PG SWI ++DK+H+F A
Sbjct: 696 RSSMKKHDVKKIPGQSWIDVEDKIHIFFA 724
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 213/445 (47%), Gaps = 44/445 (9%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
I + + D + ++ Y K G + +ARE+FD MPE+N+V++T+++ GY + +
Sbjct: 89 HILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAE 148
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
L+L M + + + + +AC G Q+H V + +I N++I
Sbjct: 149 AITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIA 208
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG-EIEEAYRLFERMP--------- 261
MY R M +A+KVF + +D +SW+S+I+G+ G E E L E +
Sbjct: 209 MYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 268
Query: 262 --GKDFVSWTTM-----------------ITG-----------FSSKGNLEKSIELFNMM 291
G + +++ +TG ++ G L+ + +FN +
Sbjct: 269 IFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQI 328
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
D +W II+G NN +EA F EM P+ ++L S+L A L QG
Sbjct: 329 ERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGM 388
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQN 410
QIH+ ++K +D+S+ NSL+++Y+ C ++ + +F + ++ + VS+N++++ Q+
Sbjct: 389 QIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQH 448
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPE 469
E L LF+ M P+ IT ++L C + ++ G ++ S KT +E +
Sbjct: 449 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIK 508
Query: 470 HYACMVDILGRAGSLAEAIDLINSM 494
+ ++D+ + GSL +A + +SM
Sbjct: 509 NG--LIDMYAKCGSLRQARRIFDSM 531
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 40/312 (12%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T L AC +G ++H + YD IL N I++MYG+ G + +A +VF M
Sbjct: 66 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 125
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGN----- 280
+R+ VS+ S+I+GY NG+ EA L+ +M D V ++ ++I + G+
Sbjct: 126 PERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGK 185
Query: 281 --------LEKSIEL------------FNMM----------PEKDDVTWTAIISGFVNNE 310
LE S L FN M P KD ++W++II+GF
Sbjct: 186 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLG 245
Query: 311 QYEEAFRWFIEMLRKDV-RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
EA EML V PN+ S L A ++ + GSQIH +K+ + +
Sbjct: 246 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAG 305
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
SL +Y++CG + A R+F I+ + S+N +I+G A NG +EA+++F +M++ G +
Sbjct: 306 CSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFI 365
Query: 430 PNQITFLSVLSA 441
P+ I+ S+L A
Sbjct: 366 PDAISLRSLLCA 377
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 134/249 (53%), Gaps = 10/249 (4%)
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAV-----SWNSLISGYVHNGEIEEAYRLFER 259
L N I R F EA + F K + ++ SLI + + + ++ +
Sbjct: 30 LMNDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDH 89
Query: 260 MPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+ D + +++ + G+L + E+F+ MPE++ V++T++I+G+ N Q EA
Sbjct: 90 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEA 149
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+++ML+ D+ P+Q S++ A A + G Q+HA V+K+ S + QN+L+++
Sbjct: 150 ITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAM 209
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQIT 434
Y + + DA ++F I ++++S++S+I+GF+Q G EAL+ ++M G+ PN+
Sbjct: 210 YVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 269
Query: 435 FLSVLSACN 443
F S L AC+
Sbjct: 270 FGSSLKACS 278
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Query: 303 ISGFVNNEQYEEAFRWF-IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
I+ N Y EA F + T S++ A +++ +L QG +IH H++ N
Sbjct: 35 INSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 94
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ D + N ++S+Y KCG++ DA +F + ERN+VSY S+I+G++QNG EA+ L+
Sbjct: 95 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYL 154
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
KM LVP+Q F S++ AC G V G
Sbjct: 155 KMLQADLVPDQFAFGSIIKACACAGDVVLG 184
>gi|449450760|ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/472 (38%), Positives = 280/472 (59%), Gaps = 9/472 (1%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y G++ +AR +FDK+P N W ++ Y + + + +F ++RGG+ + +
Sbjct: 73 YAACGKIKDARILFDKIPRTNPRRWIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYII 132
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ +ACG G ++H L+ + + D + +++I MY + G +++A +VF M+
Sbjct: 133 PSVLKACGHLSEKTTGRKLHTLILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAG 192
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL 287
+D V+ N+++SGY H+G EEA L E M + V+W T++TGFS G E EL
Sbjct: 193 KDLVALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMVREL 252
Query: 288 FNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
F M E D V+WT++ISGFV N + EEAF F ML P T+SS+L A A+
Sbjct: 253 FKEMEANGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTSATISSLLPACAS 312
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
G +IH H + + +E DV ++ +LV +Y+KCG +A +F + ERN ++NSM
Sbjct: 313 VGNGRCGKEIHGHSLALGVEKDVYVRTALVDMYAKCGYFYEAKILFWRMSERNSATWNSM 372
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVP-NQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
I G+A +G EA+ LF +MKD+ + +TF ++L+AC H GLV+ G F+ M++ Y
Sbjct: 373 IFGYANHGYCNEAIELFHQMKDDDEKKLDHLTFTAILTACAHAGLVDLGRSLFQLMQSKY 432
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
I P EHYACMVD+ GRAG LAEA DLI +M +P VWGALLGA R H ++LA+ A
Sbjct: 433 GIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPVKPDLYVWGALLGACRKHGEIELAEEA 492
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
A+HL ELEP S ++LSD+Y+ G +++ K ++++K PGCSWI
Sbjct: 493 AKHLSELEPGSVGNSLLLSDIYANAGSWGHVVKLKKMMKKRKMKKFPGCSWI 544
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 163/361 (45%), Gaps = 58/361 (16%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA---------- 121
VCS ALI Y K G E+A R+FE+M KD+VA +MV GY G EA
Sbjct: 166 VCS-ALIDMYAKSGEVEKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVL 224
Query: 122 -------------------------REIFDKMP----EKNVVAWTAMVDGYMKVDCFEDG 152
RE+F +M E +VV+WT+++ G+++ E+
Sbjct: 225 GIKPNLVTWNTLVTGFSQIGEEEMVRELFKEMEANGIEPDVVSWTSVISGFVQNFRNEEA 284
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
FD F M G S T++ L AC R G ++HG G + D+ + +++ M
Sbjct: 285 FDTFRRMLNAGFHPTSATISSLLPACASVGNGRCGKEIHGHSLALGVEKDVYVRTALVDM 344
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVS 267
Y + G+ EA +F MS+R++ +WNS+I GY ++G EA LF +M D ++
Sbjct: 345 YAKCGYFYEAKILFWRMSERNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDHLT 404
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEM 322
+T ++T + G ++ LF +M K + + ++ F + EA+ M
Sbjct: 405 FTAILTACAHAGLVDLGRSLFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTM 464
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV--SLYSKCG 380
V+P+ ++L A + + H+ ++ S+ NSL+ +Y+ G
Sbjct: 465 ---PVKPDLYVWGALLGACRKHGEIELAEEAAKHLSELE---PGSVGNSLLLSDIYANAG 518
Query: 381 N 381
+
Sbjct: 519 S 519
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 141/282 (50%), Gaps = 7/282 (2%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
I +++ G ++ + LF+ +P + W +I + Y EA F E+ R +RP++
Sbjct: 70 IAFYAACGKIKDARILFDKIPRTNPRRWIVLIGAYSRCGYYPEALSVFCELQRGGLRPSE 129
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ SVL A + G ++H ++K ++ESD + ++L+ +Y+K G V A R+F +
Sbjct: 130 YIIPSVLKACGHLSEKTTGRKLHTLILKNSLESDAYVCSALIDMYAKSGEVEKARRVFES 189
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ +++V+ N+M+SG+A +GL EEALNL +M+ G+ PN +T+ ++++ + +G E
Sbjct: 190 MAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMV 249
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT---FEPPPGVWGALLG 508
FK M+ IEP + ++ + EA D M F P +LL
Sbjct: 250 RELFKEMEA-NGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTSATISSLLP 308
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYV--VLSDLYSVIG 548
A + N K H + L + YV L D+Y+ G
Sbjct: 309 ACASVGNGRCGKEIHGHSLALGVEKDV-YVRTALVDMYAKCG 349
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 207/518 (39%), Gaps = 124/518 (23%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP---ARWRDSVCSNAL-I 78
I +A +F +P N + +I + R G + EA ++ + R + + + L
Sbjct: 79 IKDARILFDKIPRTNPRRWIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYIIPSVLKA 138
Query: 79 SGYLK---VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G+L GR + I + +E D +++D Y K G V +AR +F+ M K++VA
Sbjct: 139 CGHLSEKTTGR-KLHTLILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLVA 197
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
AMV GY E+ +L M+ G+ N +T
Sbjct: 198 LNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTW------------------------ 233
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS----KRDAVSWNSLISGYVHNGEIE 251
N+++T + ++G + ++F M + D VSW S+ISG+V N E
Sbjct: 234 -----------NTLVTGFSQIGEEEMVRELFKEMEANGIEPDVVSWTSVISGFVQNFRNE 282
Query: 252 EAYRLFERMPGKDF----VSWTTMITGFSSKGN---------------LEKSIE------ 286
EA+ F RM F + ++++ +S GN +EK +
Sbjct: 283 EAFDTFRRMLNAGFHPTSATISSLLPACASVGNGRCGKEIHGHSLALGVEKDVYVRTALV 342
Query: 287 --------------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP-NQ 331
LF M E++ TW ++I G+ N+ EA F +M D + +
Sbjct: 343 DMYAKCGYFYEAKILFWRMSERNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDH 402
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
LT +++L+A A HA +V + SL L + Y I
Sbjct: 403 LTFTAILTACA-----------HAGLVDLG--------RSLFQL------MQSKYGIVPR 437
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++ Y M+ F + G EA +L + M + P+ + ++L AC G +E
Sbjct: 438 VEH-----YACMVDVFGRAGKLAEAYDLIKTMP---VKPDLYVWGALLGACRKHGEIE-- 487
Query: 452 FIYFKSMKTLYNIEPGPEHYACMV-DILGRAGSLAEAI 488
+ ++ K L +EPG + ++ DI AGS +
Sbjct: 488 -LAEEAAKHLSELEPGSVGNSLLLSDIYANAGSWGHVV 524
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/554 (34%), Positives = 308/554 (55%), Gaps = 59/554 (10%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK-KGRVIEAREIFDKMPEKNV 133
N +I+ ++ G + A +F M K+ V+W S++ G K R++EA ++FD++PE +
Sbjct: 65 NKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++ M+ Y++ FE F
Sbjct: 125 FSYNIMLSCYVRNGNFEKAQSFF------------------------------------- 147
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+R F D N++IT Y R G M++A +F M +++ VSWN++ISGY+ G++E+A
Sbjct: 148 -NRMPFK-DAASWNTMITGYARRGEMEKARVLFYSMMEKNEVSWNAMISGYIECGDLEKA 205
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF-NMMPEKDDVTWTAIISGFVNNEQY 312
F+ P + V+WT MITG+ +E + +F +M +K+ VTW A+ISG+V N +
Sbjct: 206 AHFFKAAPFRGVVAWTAMITGYMKAKKVELAEAMFKDMTVKKNLVTWNAMISGYVENSRP 265
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
E+ + F ML + +RPN LSS L + + L G QIH
Sbjct: 266 EDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALCLGRQIHQ----------------- 308
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ +Y KCG + DA+++F + ++++V++N+MISG+AQ+G E+AL LF +M+D P+
Sbjct: 309 IVMYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQHGNAEKALCLFHEMRDSKTKPDW 368
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
ITF++VL ACNH GLV+ G YF SM Y +EP P+HY CMVD+LGRAG + EA+ LI
Sbjct: 369 ITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPDHYTCMVDLLGRAGKVEEALKLIR 428
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
SM F P V+G LLGA R H N++LA+ AA+ L+EL+P +A YV L+++Y+ D
Sbjct: 429 SMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLELDPRNAAGYVQLANIYASKNLWED 488
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
RVR + K + K PG SWI +++K+H F + + +L I L+ + + K +
Sbjct: 489 VARVRKRMKESNVVKVPGYSWIEIRNKIHHFRSSDRIHPELDSIHKKLKELERKMKLAGY 548
Query: 613 -PKHDWSLLGLERD 625
P+ +++L +E +
Sbjct: 549 KPELEFALHNVEEE 562
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 202/472 (42%), Gaps = 99/472 (20%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + + S+N+++ + + + EA ++F +P + SY M++ +VR G F +A+
Sbjct: 87 MRAKNTVSWNSLLVGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNGNFEKAQSF 146
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP ++D+ N +I+GY + G E+A +F +M+EK+ V+W +M+ GY + G + +
Sbjct: 147 FNRMP--FKDAASWNTMITGYARRGEMEKARVLFYSMMEKNEVSWNAMISGYIECGDLEK 204
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCF------------------------------- 149
A F P + VVAWTAM+ GYMK
Sbjct: 205 AAHFFKAAPFRGVVAWTAMITGYMKAKKVELAEAMFKDMTVKKNLVTWNAMISGYVENSR 264
Query: 150 -EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
EDG LF +M G+ NS L+ C G Q+H +V
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALCLGRQIHQIV-------------- 310
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKD 264
MY + G + +A K+F M K+D V+WN++ISGY +G E+A LF M D
Sbjct: 311 ---MYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQHGNAEKALCLFHEMRDSKTKPD 367
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMM-------PEKDDVTWTAIISGFVNNEQYEEAFR 317
++++ ++ + G ++ + F+ M P D +T ++ + EEA +
Sbjct: 368 WITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPDH--YTCMVDLLGRAGKVEEALK 425
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
M RP+ ++L A ++H +V ++ ++
Sbjct: 426 LIRSM---PFRPHAAVFGTLLGA----------CRVHKNVELAEFAAEKLLE-------- 464
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+D RN Y + + +A L E+ + ++MK+ +V
Sbjct: 465 --------------LDPRNAAGYVQLANIYASKNLWEDVARVRKRMKESNVV 502
>gi|449527015|ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 199/650 (30%), Positives = 344/650 (52%), Gaps = 73/650 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEA---------------EELYVNMPARWRD 70
A +F MP+R+ VS+ MI+G+ + G + EA E + ++ +
Sbjct: 56 AQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFSSLLSICAH 115
Query: 71 SVCSN----------------------ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
S CS+ AL+ Y + A ++F+ + +K+ + W +
Sbjct: 116 SGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKNDLLWDLL 175
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD--CFEDGFDLFLSMRRGG-MA 165
+ GY K + +A ++F K+P ++VVAWT M+ Y + + C + G +LF SMR G +
Sbjct: 176 LVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHNC-KRGLELFCSMRMNGEVE 234
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL--------- 216
N T + ACGR G VHG+++++GF +D + +++I Y +
Sbjct: 235 PNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDSAKAV 294
Query: 217 ----------------------GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
G +++A ++F + +++ VS+N ++ GY +G IE +
Sbjct: 295 YDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSK 354
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF-NMMPEKDDVTWTAIISGFVNNEQYE 313
RLFERM K S TMI+ +S G ++K+ +LF ++ E D VTW ++ISG++ N Q+E
Sbjct: 355 RLFERMTHKTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGYIQNHQHE 414
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A + +I M R V ++ T S++ A + G +H H ++ +S+V + SL+
Sbjct: 415 GALKLYITMCRTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLI 474
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y+KCG++ DA F ++ N+ ++ ++I+G+ +GLG EA ++F +M + PN
Sbjct: 475 DMYAKCGSIYDAQTSFASVCLPNVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGA 534
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
T L +LSAC+ G+V+EG F SM+ Y + P EHYAC+VD+LGR+G L EA I
Sbjct: 535 TLLGILSACSCAGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRC 594
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
M E +WGALL A ++L+L + A+ ++ L+P + + Y++LS++Y+ +GK +
Sbjct: 595 MPIEADRVIWGALLNACWFWMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEK 654
Query: 554 NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
VR K +++K GCSWI + +K +F AG +S + I TL+ +
Sbjct: 655 INVRRKLMSLKVKKIRGCSWIDVNNKTCVFSAGDRSHPNCNAIYSTLEHL 704
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 183/419 (43%), Gaps = 72/419 (17%)
Query: 80 GYLKVGRCEEAARIFEAMVE------KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
G K R + +F + E ++++ + + + G + A+ +F++MP ++V
Sbjct: 9 GTWKHNRWKACLELFSTLCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSV 68
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W M+ GY K + + +L M + N T + L C EG Q H L
Sbjct: 69 VSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCL 128
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V + G +G++++ Y + + A +VF + ++ + W+ L+ GYV +++A
Sbjct: 129 VLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDA 188
Query: 254 YRLFERMPGKDFVSWTTMITGFS-SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
LF ++P +D V+WTTMI+ ++ S+ N ++ +ELF M
Sbjct: 189 LDLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSMR-------------------- 228
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
+ +V PN+ T SV+ A L+ G +H + K D S+ ++L
Sbjct: 229 ----------MNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSAL 278
Query: 373 VSLYSKC-------------------------------GNVVDAYRIFTNIDERNIVSYN 401
+ Y +C G + DA IF + E+N VSYN
Sbjct: 279 ILFYCQCEAIDSAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYN 338
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
M+ G+A +G E + LF +M + + T +SV S G +++ F F+S+K+
Sbjct: 339 LMLKGYATSGRIEGSKRLFERMTHK-TTSSLNTMISVYS---RNGEIDKAFKLFESVKS 393
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 165/414 (39%), Gaps = 130/414 (31%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVR------RGMFYEAEELYVNM-------------- 64
+A ++F +P R+ V++ MI+ + R RG+ EL+ +M
Sbjct: 187 DALDLFMKIPTRDVVAWTTMISAYARSEHNCKRGL-----ELFCSMRMNGEVEPNEFTFD 241
Query: 65 -----PARWR--------------------DSVCSNALISGYLKVGRCEEAARIFEAMVE 99
R R SVCS ALI Y + + A ++++M
Sbjct: 242 SVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCS-ALILFYCQCEAIDSAKAVYDSMER 300
Query: 100 KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM 159
+ A S+++G GR+ +A EIF K+ EKN V++ M+ GY E LF M
Sbjct: 301 PCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERM 360
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
H S N++I++Y R G +
Sbjct: 361 ------------------------------THKTTSSL---------NTMISVYSRNGEI 381
Query: 220 DEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEEAYR-------------------LFER 259
D+A K+F S+ S+ D V+WNS+ISGY+ N + E A + LF+
Sbjct: 382 DKAFKLFESVKSEGDPVTWNSMISGYIQNHQHEGALKLYITMCRTSVERSRSTFSALFQA 441
Query: 260 MPGKDFVSW--------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+++ T++I ++ G++ + F + + +
Sbjct: 442 CTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCLPNVAAF 501
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
TA+I+G+V++ EAF F EML+ V PN TL +LSA + + +G +
Sbjct: 502 TALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTV 555
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ +S I+ G+L+ + LFN MP + V+W +ISG+ +Y EA EM
Sbjct: 36 NIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEMH 95
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+V+ N+ T SS+LS A + ++G Q H V+K ++ + ++LV Y+ ++
Sbjct: 96 CNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDIS 155
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A ++F + ++N + ++ ++ G+ + L ++AL+LF K+ +V T +S +
Sbjct: 156 GAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVA-WTTMISAYARSE 214
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
H + G F SM+ +EP + +V GR
Sbjct: 215 HN--CKRGLELFCSMRMNGEVEPNEFTFDSVVRACGR 249
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 202/627 (32%), Positives = 345/627 (55%), Gaps = 51/627 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALI 78
A ++F + RN V + AMI G+ G ++ EL+++M + + S+ S +
Sbjct: 381 AAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAV 440
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
S L++G + + I + + K++ ++VD Y K G + +AR+IF+ M +++ V+W
Sbjct: 441 SHDLEMGS-QFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNT 499
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ GY++ + + FDLF+ M G+ + L +AC +G QVH L + G
Sbjct: 500 IIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCG 559
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
D + G+S+I MY + G +++A KVFS M + VS N+LI+GY N +EEA LF+
Sbjct: 560 LDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQ 618
Query: 259 RMPGKDF----VSWTTMIT---------------------GFSSKGN------------- 280
M K +++ T++ GFSS+G
Sbjct: 619 EMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNS 678
Query: 281 --LEKSIELFNMMPE-KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
+ ++ LF+ + K V WT ++SG N YEEA +++ EM P+Q T +V
Sbjct: 679 RRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTV 738
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER-N 396
L + ++L +G IH+ + + + D N+L+ +Y+KCG++ + ++F + R N
Sbjct: 739 LRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSN 798
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+VS+NS+I+G+A+NG E+AL +F M+ ++P++ITFL VL+AC+H G V +G F+
Sbjct: 799 VVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFE 858
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
M Y IE +H ACMVD+LGR G L EA D I + +P +W +LLGA R H +
Sbjct: 859 MMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDD 918
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
++AA+ L+ELEP +++ YV+LS++Y+ G+ + N +R + + ++K PG SWI +
Sbjct: 919 MRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDV 978
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ H+F AG +S D+ +IE+ L+ +
Sbjct: 979 GQRRHIFAAGDQSHSDIGKIEMFLEDL 1005
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 149/581 (25%), Positives = 266/581 (45%), Gaps = 86/581 (14%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR--DSVCSNALISGYL 82
+A +F + N V + + +G+V+ G+ EA ++ M D + +I+ Y+
Sbjct: 213 DAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYI 272
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+G+ ++A +F M DVVAW M+ G+ K+G I A E
Sbjct: 273 SLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIE------------------- 313
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
FL+MR+ + TL + A G G+ VH + G +
Sbjct: 314 ------------YFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
I +G+S+++MY + M+ A KVF + +R+ V WN++I GY HNGE + LF M
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 263 K----DFVSWTTMITG-----------------------------------FSSKGNLEK 283
D ++T++++ ++ G LE
Sbjct: 422 SGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALED 481
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ ++F M ++D+V+W II G+V +E EAF F+ M + + L+S L A
Sbjct: 482 ARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTN 541
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
L QG Q+H VK ++ + +SL+ +YSKCG + DA ++F+++ E ++VS N++
Sbjct: 542 VHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNAL 601
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I+G++QN L EEA+ LF++M +G+ P++ITF +++ AC+ + G F +
Sbjct: 602 IAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLG-TQFHGQIIKWG 659
Query: 464 IEPGPEHYACMVDILG---RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
E+ + +LG + +AEA L + ++ +W ++ H +
Sbjct: 660 FSSEGEYLG--ISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSG---HSQNGFYE 714
Query: 521 LAAQHLMELEPDSATP----YVVLSDLYSVIGKKRDGNRVR 557
A + E+ D A P +V + + SV+ R+G +
Sbjct: 715 EALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIH 755
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 232/497 (46%), Gaps = 55/497 (11%)
Query: 20 NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS 79
C ++++ ++F MP R A++ +R G ++ L + + + R NA++
Sbjct: 55 QCKLFKSRKVFDEMPHRLALA--------LRIGKAVHSKSLILGIDSEGR---LGNAIVD 103
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
Y K + A + F ++ EKDV AW SM+ Y G+ P K + +
Sbjct: 104 LYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQ-----------PGKVLRS---- 147
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
F+S+ + N T +I+ R G Q+H + + G
Sbjct: 148 ----------------FVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGL 191
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ + G +++ MY + + +A +VF + + V W L SGYV G EEA +FER
Sbjct: 192 ERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFER 251
Query: 260 MPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
M G+ D +++ T+I + S G L+ + LF MP D V W +ISG A
Sbjct: 252 MRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVA 311
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+F+ M + V+ + TL SVLSA A L+ G +HA +K+ + S++ + +SLVS+
Sbjct: 312 IEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
YSKC + A ++F ++ERN V +N+MI G+A NG + + LF MK G + TF
Sbjct: 372 YSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 436 LSVLSACNHVGLVEEGFIYFKSM---KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
S+LS C +E G + + K N+ G +VD+ + G+L +A +
Sbjct: 432 TSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGN----ALVDMYAKCGALEDARQIFE 487
Query: 493 SMTFEPPPGVWGALLGA 509
M + W ++G
Sbjct: 488 HMC-DRDNVSWNTIIGG 503
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 203/407 (49%), Gaps = 17/407 (4%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
+E++ G++VD Y K R+ +A+ +FD + + N V WT + GY+K E+ +F
Sbjct: 191 LERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFE 250
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
MR G + + + + ++ + G + D++ N +I+ +G+ G
Sbjct: 251 RMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMP----SPDVVAWNVMISGHGKRG 306
Query: 218 FMDEANKVFSMMSKRDAVSWNSLIS------GYVHN---GEIEEAYRLFERMPGKDFVSW 268
A + F M K S S + G V N G + A + + +V
Sbjct: 307 CEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVG- 365
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+++++ +S +E + ++F + E++DV W A+I G+ +N + + F++M
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ T +S+LS A + L GSQ H+ ++K + ++ + N+LV +Y+KCG + DA +I
Sbjct: 426 IDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQI 485
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV-GL 447
F ++ +R+ VS+N++I G+ Q+ EA +LF +M G+V + S L AC +V GL
Sbjct: 486 FEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGL 545
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ ++ S+K ++ + ++D+ + G + +A + +SM
Sbjct: 546 YQGKQVHCLSVKC--GLDRVLHTGSSLIDMYSKCGIIEDARKVFSSM 590
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 44/311 (14%)
Query: 245 VHNGEIE---------EAYRLFERMPGK--------DFVSWTTMITGFSSKGNLEKSI-- 285
+H G +E ++ ++F+ MP + V ++I G S+G L +I
Sbjct: 44 IHQGLLEICLEQCKLFKSRKVFDEMPHRLALALRIGKAVHSKSLILGIDSEGRLGNAIVD 103
Query: 286 ------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+ FN + EKD W +++S + + Q + R F+ + + PN+ T
Sbjct: 104 LYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFT 162
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
S VLS SA + G QIH ++KM +E + +LV +Y+KC + DA R+F I
Sbjct: 163 FSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIV 222
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+ N V + + SG+ + GL EEA+ +F +M+ EG P+ + F++V++ +G +++ +
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARL 282
Query: 454 YFKSMKTLYNIEPGPEHYA--CMVDILGRAGSLAEAIDLINSM---TFEPPPGVWGALLG 508
F M P P+ A M+ G+ G AI+ +M + + G++L
Sbjct: 283 LFGEM-------PSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLS 335
Query: 509 AGRTHLNLDLA 519
A NLDL
Sbjct: 336 AIGIVANLDLG 346
>gi|255559020|ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540375|gb|EEF41946.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 547
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/548 (35%), Positives = 312/548 (56%), Gaps = 23/548 (4%)
Query: 48 FVRRGMFYEAEELYVNMPARWRDSVCS-----NALISGY-----LKVGRCEEAARIFEAM 97
FV RG+ + + +P +R S + LI Y L G+ A I +
Sbjct: 3 FVIRGITFHGP--HFKIPIIYRSFQSSSLHTFDELIKTYTRDHALNQGKHLHARLIVSGL 60
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
+ A ++ Y + ++ R++FD++P+ N T ++ Y + ++D D+F
Sbjct: 61 ASSNNFA-SKLISFYTETRQLSIVRKLFDRIPKPNFYQRTVLIGAYSRHGFYQDVLDVFS 119
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
M+ + N + + ACG F + G +H ++ R F+ D+++ ++I MY R
Sbjct: 120 EMQNERLRPNKFVIPSVLRACGHVFDLQTGKILHSVILRHLFESDVVVNTALIDMYSRCR 179
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD----FVSWTTMIT 273
+++A KVF M ++D V+ N+++ GY NG +E + L E+M D V+W T+I+
Sbjct: 180 HVEKARKVFDGMQEKDLVALNAMVLGYAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTLIS 239
Query: 274 GFSSKGNLEKSIELFNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
GF+ G+ ELF +M E D ++WT++IS FV N E AF F +ML+ P
Sbjct: 240 GFAQAGDKVMVQELFGLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYP 299
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N T+SS+L A A+ A + G ++H + + +E D+ +++++V +YSKCG + +A +F
Sbjct: 300 NSATISSLLPACASLANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLF 359
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACNHVGLV 448
+ + ER+ V++NSMI G+A +G +EA+ LF +M K E + ++F +VL+AC+H LV
Sbjct: 360 SKMPERHTVTWNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTACSHGRLV 419
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
E G F M Y I P EHYACM+D+LGRAG L+EA D+I +M EP VWGALLG
Sbjct: 420 ELGQSLFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFVWGALLG 479
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R H +DLA++AA+HL ELEP +A ++LS+LY+ G + +++M K+ KR+RK
Sbjct: 480 ACRQHGEIDLAEIAARHLAELEPRNAGNNMLLSNLYADAGSWENVAKLKMGKR-KRLRKF 538
Query: 569 PGCSWIIL 576
SWI L
Sbjct: 539 SAYSWIQL 546
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 150/349 (42%), Gaps = 52/349 (14%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARWRDS---VCSNALISGY-- 81
++F +P N +I + R G + + +++ M R R + + S G+
Sbjct: 85 KLFDRIPKPNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNERLRPNKFVIPSVLRACGHVF 144
Query: 82 -LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
L+ G+ + I + E DVV +++D Y + V +AR++FD M EK++VA AMV
Sbjct: 145 DLQTGKILHSV-ILRHLFESDVVVNTALIDMYSRCRHVEKARKVFDGMQEKDLVALNAMV 203
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY + ++GF L M+ + N +T L + ++ GL+S GF+
Sbjct: 204 LGYAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTLISGFAQAGDKVMVQELFGLMSMHGFE 263
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG----------------- 243
D+I S+I+ + + + A F M + A ++ IS
Sbjct: 264 PDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISSLLPACASLANVRHGREL 323
Query: 244 ----------------------YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNL 281
Y G I EA LF +MP + V+W +MI G+++ G
Sbjct: 324 HGYAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLFSKMPERHTVTWNSMIFGYANHGYC 383
Query: 282 EKSIELFNMMPEK-----DDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+++IELFN M + D +++TA+++ + E F+ M K
Sbjct: 384 DEAIELFNQMEKTEAKKIDHLSFTAVLTACSHGRLVELGQSLFLLMHEK 432
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 124/312 (39%), Gaps = 71/312 (22%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPM----RNAVSYAAMITGFVRRGMFYE 56
M ++ + NAM+ N + E F + M M N V++ +I+GF + G
Sbjct: 191 MQEKDLVALNAMVLGYAQNGFA-KEGFLLVEQMQMLDIKPNLVTWNTLISGFAQAGDKVM 249
Query: 57 AEELY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM----------------- 97
+EL+ ++M D + ++IS +++ E A F+ M
Sbjct: 250 VQELFGLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISSLLP 309
Query: 98 ----------------------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
VE+D+ ++VD Y K G + EAR +F KMPE++ V
Sbjct: 310 ACASLANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLFSKMPERHTVT 369
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W +M+ GY ++ +LF M + + ++ T + AC HG +
Sbjct: 370 WNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTACS-----------HGRL 418
Query: 195 SRFGFDYDIILGNS------------IITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLI 241
G +++ +I + GR G + EA + + +M + D W +L+
Sbjct: 419 VELGQSLFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFVWGALL 478
Query: 242 SGYVHNGEIEEA 253
+GEI+ A
Sbjct: 479 GACRQHGEIDLA 490
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 216/652 (33%), Positives = 344/652 (52%), Gaps = 54/652 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD------SVCSN 75
S+ +A ++F MP RN VS+ +I G+ + F EA L+ + + S
Sbjct: 94 SLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLK 153
Query: 76 ALISG-YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
L+S + K+G A +++ + D +++D Y G AR++FD + K++V
Sbjct: 154 LLVSAEWAKLGFSVHAC-VYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMV 212
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WT MV Y++ +CFE+ LF MR G N+ T + +AC + G VHG
Sbjct: 213 SWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCA 272
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ + ++ +G +I +Y + G +D+A +VF M K D + W+ +I+ Y + + EEA
Sbjct: 273 FKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAI 332
Query: 255 RLFERMP-------------------------------------GKD---FVSWTTMITG 274
+F RM G D FVS ++
Sbjct: 333 EMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVS-NALMDM 391
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ G +E S++LF+ P DV+W +I G+V E+A F +ML V+ ++T
Sbjct: 392 YAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTY 451
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
SSVL A A A L GSQIH+ VK + + + N+L+ +Y+KCGN+ DA +F + E
Sbjct: 452 SSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLRE 511
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+ VS+N+MISG++ +GL EAL F M + P+++TF+ +LSAC++ GL++ G Y
Sbjct: 512 HDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAY 571
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
FKSM Y+IEP EHY CMV +LGR+G L +A L++ + FEP VW ALL A H
Sbjct: 572 FKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHN 631
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR--IRKSPGCS 572
+++L +++AQ ++E+EP+ +V+LS++Y+ +R GN ++ +KR IRK PG S
Sbjct: 632 DVELGRISAQRVLEIEPEDEATHVLLSNIYA--NARRWGNVASIRTSMKRKGIRKEPGLS 689
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS-KGTKEFDWPKHDWSLLGLE 623
WI + +VH F G S D K I L+ ++ K E P LL +E
Sbjct: 690 WIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVE 741
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/554 (25%), Positives = 255/554 (46%), Gaps = 82/554 (14%)
Query: 34 PMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR--DSVCSNALISGYLKVGRCEEAA 91
P N Y +++ +R G + L+ + + D +N L++ Y+K +AA
Sbjct: 40 PEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAA 99
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
++F+ M +++ V++ +++ GY + R F +
Sbjct: 100 KLFDEMPDRNTVSFVTLIQGYSQCLR-------------------------------FSE 128
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
LF ++ G N + + + + G VH V + GFD D +G ++I
Sbjct: 129 AIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALID 188
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG--- 262
Y G+ + A +VF + +D VSW +++ YV N EE+ +LF RM P
Sbjct: 189 CYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFT 248
Query: 263 ------------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
++ +I + G+++ ++++F MP
Sbjct: 249 FASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMP 308
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+ D + W+ +I+ + +EQ EEA F M R V PNQ TL+S+L A A+ L G+Q
Sbjct: 309 KDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQ 368
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
IH HVVK+ ++ +V + N+L+ +Y+KCG + ++ ++F+ VS+N++I G+ Q G
Sbjct: 369 IHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGN 428
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLY--NIEPGPE 469
GE+AL LF+ M + + ++T+ SVL AC + +E G I+ S+KT+Y N G
Sbjct: 429 GEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNA 488
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
++D+ + G++ +A L+ M E W A++ H A + ++E
Sbjct: 489 ----LIDMYAKCGNIKDA-RLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLET 543
Query: 530 E--PDSATPYVVLS 541
E PD T +LS
Sbjct: 544 ECKPDKVTFVGILS 557
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 295/521 (56%), Gaps = 42/521 (8%)
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK-GRVIEAREI 124
AR S ++ ++ G A F + K + ++ GY + GR+ +AR +
Sbjct: 12 ARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHL 71
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD++P + V++ ++ + + LF SM
Sbjct: 72 FDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPV----------------------- 108
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
D++ N++++ + G ++EA VF M R++VSWN+++SG+
Sbjct: 109 ----------------RDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGF 152
Query: 245 VHNGEIEEAYRLFERMPGK-DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
+ ++ A F P K D V WT M++G+ GN+ K+IE F MP ++ V+W A++
Sbjct: 153 ACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVV 212
Query: 304 SGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
+G+V N ++A R F M+R+ +V+PN TLSSVL + + L G QIH +K+ +
Sbjct: 213 AGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPL 272
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
++++ SLVS+Y KCG++ A ++F + R++V++N+MISG+AQ+G G+EA+NLF +
Sbjct: 273 SRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFER 332
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
MKDEG+ PN ITF++VL+AC H GL + G F+ M+ LY IEP +HY+CMVD+L RAG
Sbjct: 333 MKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAG 392
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L A+DLI SM FEP P +G LL A R + NL+ A+LAA L+E +P SA YV L++
Sbjct: 393 KLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLAN 452
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+Y+ + D +RVR K + K+PG SWI +K +H F
Sbjct: 453 IYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEF 493
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 149/274 (54%), Gaps = 8/274 (2%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +FA+MP+R+ VS+ M++G + G EA+ +++ MP R +SV NA++SG+
Sbjct: 99 ARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR--NSVSWNAMVSGFACSR 156
Query: 86 RCEEAARIFEAMVEK-DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
A F EK D V W +MV GY G V++A E F+ MP +N+V+W A+V GY+
Sbjct: 157 DMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYV 216
Query: 145 KVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
K +D LF +M R + N+ TL+ + C G Q+H + ++
Sbjct: 217 KNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNL 276
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+G S+++MY + G + A K+F M RD V+WN++ISGY +G+ +EA LFERM +
Sbjct: 277 TVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDE 336
Query: 264 ----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
+++++ ++T G + I F M E
Sbjct: 337 GVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQE 370
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 189/458 (41%), Gaps = 114/458 (24%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRR-GMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
A E FA+ P + +Y ++ G+ R G +A L+ +P D+V N L+S +
Sbjct: 36 AEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTP--DAVSYNTLLSCHFAS 93
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
G + A R+F +M +DVV+W +MV G K G V EA+ +F MP +N V+W AMV G+
Sbjct: 94 GDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFA 153
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
C D A +FR G D +
Sbjct: 154 ---CSRD-----------------------MSAAEEWFR---NAPEKG---------DAV 175
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--- 261
L ++++ Y +G + +A + F M R+ VSWN++++GYV N ++A RLF M
Sbjct: 176 LWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREA 235
Query: 262 ------------------------GKDFVSW-------------TTMITGFSSKGNLEKS 284
GK W T++++ + G+L +
Sbjct: 236 NVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSA 295
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+LF M +D V W A+ISG+ + +EA F M + V PN +T +VL+A
Sbjct: 296 CKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTAC--- 352
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
IH + + +Q + Y I +D Y+ M+
Sbjct: 353 --------IHTGLCDFGIRCFEGMQ--------------ELYGIEPRVDH-----YSCMV 385
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ G E A++L R M E P+ + ++L+AC
Sbjct: 386 DLLCRAGKLERAVDLIRSMPFE---PHPSAYGTLLAAC 420
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP----- 65
T+L++ C + A ++F M R+ V++ AMI+G+ + G EA L+ M
Sbjct: 280 TSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVE 339
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIE 120
W V A+++ + G C+ R FE M +E V + MVD C+ G++
Sbjct: 340 PNWITFV---AVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLER 396
Query: 121 AREIFDKMP 129
A ++ MP
Sbjct: 397 AVDLIRSMP 405
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 196/623 (31%), Positives = 315/623 (50%), Gaps = 71/623 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M DRT SY M+ AL+ + EA E++ P + + A I+GFVR + + A +
Sbjct: 175 MPDRTVVSYTTMVDALMKRG-RVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGV 233
Query: 61 YVNM-PARWRDS----VC---------------------------------SNALISGYL 82
+ M R R + VC N+LI+ YL
Sbjct: 234 FRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIVGLAIKSNFFESSIEVQNSLITLYL 293
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
++G A ++F+ M KDVV+W +++D Y + G + AR + D MPE+N V+W ++
Sbjct: 294 RMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIAR 353
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + + L+ M G N + + AC R G ++H + G +
Sbjct: 354 HEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACASLEDLRGGARIHARSLKMGSSTN 413
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ + S+I MY + +A +F + +++ V WNSL+SGY +NG++ EA LF++MP
Sbjct: 414 VFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIVCWNSLVSGYSYNGKMVEAMYLFKKMPA 473
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
++ SW T+I+G++ N Q+ +A + F M
Sbjct: 474 RNLASWNTIISGYA-------------------------------QNRQFVDALKSFNAM 502
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L P ++T SSVL A A +L G HA +K+ +E + I +L +Y+K G++
Sbjct: 503 LASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDL 562
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ R+F + ERN V++ +MI G A+NG EE++ LF M G+ PN+ TFL++L AC
Sbjct: 563 QSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFAC 622
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVE+ YF M+ L I P +HY CMVD+L RAG LAEA L+ +
Sbjct: 623 SHGGLVEQAIHYFDKMQAL-GISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANS 681
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W ALL A T+ N ++A+ AA+ L EL D+ YV+LS++Y+ G+ +D R+R+ K
Sbjct: 682 WAALLSACNTYRNEEIAERAAKRLHELAKDNTAGYVLLSNMYASCGRWKDAARIRVLMKG 741
Query: 563 KRIRKSPGCSWIILKDKVHLFLA 585
++K GCSW+ ++ + H F +
Sbjct: 742 TTLKKDGGCSWVQVRGQYHAFFS 764
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 208/417 (49%), Gaps = 66/417 (15%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
++S ++K G A R+F+ M ++ VV++ +MVD K+GRV EA E++++ P +V +
Sbjct: 155 MVSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 214
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV-- 194
TA + G+++ + + +F M + N IT+ + +AC + + + GL
Sbjct: 215 TATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIVGLAIK 274
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
S F F+ I + NS+IT+Y R+G A KVF M +D VSW +L+ Y +G+++ A
Sbjct: 275 SNF-FESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGAR 333
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
R+ + MP ++ VSW T+I +GN ++++L++
Sbjct: 334 RVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYS------------------------- 368
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
+ML RPN SSVLSA A+ L G++IHA +KM ++V + SL+
Sbjct: 369 ------QMLADGCRPNISCFSSVLSACASLEDLRGGARIHARSLKMGSSTNVFVSCSLID 422
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE-------- 426
+Y KC DA IF + ++NIV +NS++SG++ NG EA+ LF+KM
Sbjct: 423 MYCKCNKCGDAQTIFDTLPQKNIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTI 482
Query: 427 -----------------------GLVPNQITFLSVLSAC-NHVGLVEEGFIYFKSMK 459
G VP +ITF SVL AC N LV + K++K
Sbjct: 483 ISGYAQNRQFVDALKSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIK 539
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 145/313 (46%), Gaps = 36/313 (11%)
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS---WNS 239
R + +H R G D + + ++T Y E ++ F DA S ++
Sbjct: 95 RLPLALSLHAHAVRSGVAADRSVASHLLTTYAAFARAAERDRAFGDCVAADAASPFAYDF 154
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
++S +V G+I A RLF+ MP + VS+TTM+ +G + +++EL+ P +
Sbjct: 155 MVSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 214
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TA ISGFV NE + A F +ML VRPN +T+ ++ A I +K
Sbjct: 215 TATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIVGLAIK 274
Query: 360 MN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNID------------------------- 393
N ES + +QNSL++LY + G+ A ++F +D
Sbjct: 275 SNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARR 334
Query: 394 ------ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
ERN VS+ ++I+ Q G EA+ L+ +M +G PN F SVLSAC +
Sbjct: 335 VLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACASLED 394
Query: 448 VEEGF-IYFKSMK 459
+ G I+ +S+K
Sbjct: 395 LRGGARIHARSLK 407
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/551 (34%), Positives = 315/551 (57%), Gaps = 14/551 (2%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP- 129
S+C N LIS Y K G+ E A R+F++M ++ +W SM+ Y G + +A +F ++
Sbjct: 270 SLC-NPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELES 328
Query: 130 ---EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+ ++V W ++ G+ E+ ++ M+ G NS ++T + +A
Sbjct: 329 SDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNM 388
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G + HG V R GFD D+ +G S+I MY + + A VF M R+ +WNSL+SGY
Sbjct: 389 GKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSF 448
Query: 247 NGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVT 298
G E+A RL +M + D V+W MI+G++ G ++++ + + + V+
Sbjct: 449 KGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVS 508
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA+ISG ++ ++F +M ++ V PN +++ +L A A+ + L +G +IH +
Sbjct: 509 WTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSI 568
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ DV + +L+ +YSK ++ +A+++F I + + S+N MI GFA GLG+EA++
Sbjct: 569 RNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAIS 628
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
+F +M+ G+ P+ ITF ++LSAC + GL+ EG+ YF SM T Y I P EHY CMVD+L
Sbjct: 629 VFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLL 688
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L EA DLI++M +P +WGALLG+ R H NL A+ AA++L +LEP+++ Y+
Sbjct: 689 GRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYI 748
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
++ +LYS+ + D + +R +R SWI + +VH+F + K D +I
Sbjct: 749 LMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYF 808
Query: 599 TL-QTISKGTK 608
L Q +S+ K
Sbjct: 809 ELYQLVSEMKK 819
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 192/397 (48%), Gaps = 28/397 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV ++++ Y + + +A ++F +MP + W + ++ + + G +LF M+
Sbjct: 167 DVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQ 226
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+ + T+ + +ACG+ Q+HG V RFG D D+ L N +I+MY + G ++
Sbjct: 227 FSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLE 286
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
A +VF M R+ SWNS+IS Y G + +A+ LF + D
Sbjct: 287 LARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSD---------------- 330
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
M P D VTW ++SG + EE M + +PN +++SVL A
Sbjct: 331 ---------MKP--DIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQA 379
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+ LN G + H +V++ + DV + SL+ +Y K ++ A +F N+ RNI ++
Sbjct: 380 ISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAW 439
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
NS++SG++ G+ E+AL L +M+ EG+ P+ +T+ ++S G +E K+
Sbjct: 440 NSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKS 499
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
L + P + ++ +AG+ +++ M E
Sbjct: 500 L-GLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQE 535
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 43/265 (16%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D +LI Y+K A +F+ M +++ AW S+V GY KG +A + ++M
Sbjct: 404 DVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQME 463
Query: 130 EK---------------------------------------NVVAWTAMVDGYMKVDCFE 150
++ NVV+WTA++ G +
Sbjct: 464 KEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNR 523
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
D F M++ G+ NS ++T L AC ++G ++H L R GF D+ + ++I
Sbjct: 524 DSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALI 583
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFV 266
MY + + A+KVF + + SWN +I G+ G +EA +F M G D +
Sbjct: 584 DMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAI 643
Query: 267 SWTTMITGFSSKGNLEKSIELFNMM 291
++T +++ + G + + + F+ M
Sbjct: 644 TFTALLSACKNSGLIGEGWKYFDSM 668
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/534 (35%), Positives = 299/534 (55%), Gaps = 44/534 (8%)
Query: 55 YEAEELYVNMPARWRDSVCS--NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY 112
Y + L A R CS ++ ++ G A F + K + ++ GY
Sbjct: 48 YPSRLLAPTPLASARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGY 107
Query: 113 CKK-GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
+ GR+ +AR +FD++P + V++ ++ + + LF SM
Sbjct: 108 ARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPV---------- 157
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
D++ N++++ + G ++EA VF M
Sbjct: 158 -----------------------------RDVVSWNTMVSGLSKSGAVEEAKAVFLAMPV 188
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-DFVSWTTMITGFSSKGNLEKSIELFNM 290
R++VSWN+++SG+ + ++ A F P K D V WT M++G+ GN+ K+IE F
Sbjct: 189 RNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEA 248
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQ 349
MP ++ V+W A+++G+V N ++A R F M+R+ +V+PN TLSSVL + + L
Sbjct: 249 MPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 308
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G QIH +K+ + ++++ SLVS+Y KCG++ A ++F + R++V++N+MISG+AQ
Sbjct: 309 GKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQ 368
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+G G+EA+NLF +MKDEG+ PN ITF++VL+AC H GL + G F+ M+ LY IEP +
Sbjct: 369 HGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVD 428
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
HY+CMVD+L RAG L A+DLI SM FEP P +G LL A R + NL+ A+LAA L+E
Sbjct: 429 HYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEK 488
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+P SA YV L+++Y+ + D +RVR K + K+PG SWI +K +H F
Sbjct: 489 DPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEF 542
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 157/294 (53%), Gaps = 9/294 (3%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
+ SYN +++ + A +FA+MP+R+ VS+ M++G + G EA+ +++ MP
Sbjct: 129 AVSYNTLLSCHFASG-DADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 187
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK-DVVAWGSMVDGYCKKGRVIEAREI 124
R +SV NA++SG+ A F EK D V W +MV GY G V++A E
Sbjct: 188 VR--NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEY 245
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFR 183
F+ MP +N+V+W A+V GY+K +D LF +M R + N+ TL+ + C
Sbjct: 246 FEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSA 305
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G Q+H + ++ +G S+++MY + G + A K+F M RD V+WN++ISG
Sbjct: 306 LGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISG 365
Query: 244 YVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
Y +G+ +EA LFERM + +++++ ++T G + I F M E
Sbjct: 366 YAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQE 419
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 189/458 (41%), Gaps = 114/458 (24%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRR-GMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
A E FA+ P + +Y ++ G+ R G +A L+ +P D+V N L+S +
Sbjct: 85 AEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTP--DAVSYNTLLSCHFAS 142
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
G + A R+F +M +DVV+W +MV G K G V EA+ +F MP +N V+W AMV G+
Sbjct: 143 GDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFA 202
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
C D A +FR G D +
Sbjct: 203 ---CSRD-----------------------MSAAEEWFR---NAPEKG---------DAV 224
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--- 261
L ++++ Y +G + +A + F M R+ VSWN++++GYV N ++A RLF M
Sbjct: 225 LWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREA 284
Query: 262 ------------------------GKDFVSW-------------TTMITGFSSKGNLEKS 284
GK W T++++ + G+L +
Sbjct: 285 NVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSA 344
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+LF M +D V W A+ISG+ + +EA F M + V PN +T +VL+A
Sbjct: 345 CKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTAC--- 401
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
IH + + +Q + Y I +D Y+ M+
Sbjct: 402 --------IHTGLCDFGIRCFEGMQ--------------ELYGIEPRVDH-----YSCMV 434
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ G E A++L R M E P+ + ++L+AC
Sbjct: 435 DLLCRAGKLERAVDLIRSMPFE---PHPSAYGTLLAAC 469
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP----- 65
T+L++ C + A ++F M R+ V++ AMI+G+ + G EA L+ M
Sbjct: 329 TSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVE 388
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIE 120
W V A+++ + G C+ R FE M +E V + MVD C+ G++
Sbjct: 389 PNWITFV---AVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLER 445
Query: 121 AREIFDKMP 129
A ++ MP
Sbjct: 446 AVDLIRSMP 454
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 295/521 (56%), Gaps = 42/521 (8%)
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK-GRVIEAREI 124
AR S ++ ++ G A F + K + ++ GY + GR+ +AR +
Sbjct: 12 ARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHL 71
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD++P + V++ ++ + + LF SM
Sbjct: 72 FDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPV----------------------- 108
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
D++ N++++ + G ++EA VF M R++VSWN+++SG+
Sbjct: 109 ----------------RDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGF 152
Query: 245 VHNGEIEEAYRLFERMPGK-DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
+ ++ A F P K D V WT M++G+ GN+ K+IE F MP ++ V+W A++
Sbjct: 153 ACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVV 212
Query: 304 SGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
+G+V N ++A R F M+R+ +V+PN TLSSVL + + L G QIH +K+ +
Sbjct: 213 AGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPL 272
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
++++ SLVS+Y KCG++ A ++F + R++V++N+MISG+AQ+G G+EA+NLF +
Sbjct: 273 SRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFER 332
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
MKDEG+ PN ITF++VL+AC H GL + G F+ M+ LY IEP +HY+CMVD+L RAG
Sbjct: 333 MKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAG 392
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L A+DLI SM FEP P +G LL A R + NL+ A+LAA L+E +P SA YV L++
Sbjct: 393 KLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLAN 452
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+Y+ + D +RVR K + K+PG SWI +K +H F
Sbjct: 453 IYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEF 493
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 157/294 (53%), Gaps = 9/294 (3%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
+ SYN +++ + A +FA+MP+R+ VS+ M++G + G EA+ +++ MP
Sbjct: 80 AVSYNTLLSCHFASG-DADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 138
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK-DVVAWGSMVDGYCKKGRVIEAREI 124
R +SV NA++SG+ A F EK D V W +MV GY G V++A E
Sbjct: 139 VR--NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEY 196
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFR 183
F+ MP +N+V+W A+V GY+K +D LF +M R + N+ TL+ + C
Sbjct: 197 FEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSA 256
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G Q+H + ++ +G S+++MY + G + A K+F M RD V+WN++ISG
Sbjct: 257 LGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISG 316
Query: 244 YVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
Y +G+ +EA LFERM + +++++ ++T G + I F M E
Sbjct: 317 YAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQE 370
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 189/458 (41%), Gaps = 114/458 (24%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRR-GMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
A E FA+ P + +Y ++ G+ R G +A L+ +P D+V N L+S +
Sbjct: 36 AEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTP--DAVSYNTLLSCHFAS 93
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
G + A R+F +M +DVV+W +MV G K G V EA+ +F MP +N V+W AMV G+
Sbjct: 94 GDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFA 153
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
C D A +FR G D +
Sbjct: 154 ---CSRD-----------------------MSAAEEWFR---NAPEKG---------DAV 175
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--- 261
L ++++ Y +G + +A + F M R+ VSWN++++GYV N ++A RLF M
Sbjct: 176 LWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREA 235
Query: 262 ------------------------GKDFVSW-------------TTMITGFSSKGNLEKS 284
GK W T++++ + G+L +
Sbjct: 236 NVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSA 295
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+LF M +D V W A+ISG+ + +EA F M + V PN +T +VL+A
Sbjct: 296 CKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTAC--- 352
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
IH + + +Q + Y I +D Y+ M+
Sbjct: 353 --------IHTGLCDFGIRCFEGMQ--------------ELYGIEPRVDH-----YSCMV 385
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ G E A++L R M E P+ + ++L+AC
Sbjct: 386 DLLCRAGKLERAVDLIRSMPFE---PHPSAYGTLLAAC 420
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP----- 65
T+L++ C + A ++F M R+ V++ AMI+G+ + G EA L+ M
Sbjct: 280 TSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVE 339
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIE 120
W V A+++ + G C+ R FE M +E V + MVD C+ G++
Sbjct: 340 PNWITFV---AVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLER 396
Query: 121 AREIFDKMP 129
A ++ MP
Sbjct: 397 AVDLIRSMP 405
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 329/629 (52%), Gaps = 84/629 (13%)
Query: 28 EIFATMP--MRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARW----------- 68
+IF+ P MR++V Y AMIT + + A EL+ +M P +
Sbjct: 100 KIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALAL 159
Query: 69 ---RDSVCS------------------NALISGYLKVGR---------CEEAARIFEAMV 98
++ C NALIS Y+K EA ++F+ M
Sbjct: 160 VAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMP 219
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+D ++W +++ GY K + A+E + +K VAW AM+ GY + + F++F
Sbjct: 220 NRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRK 279
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHG----LVSRFGFDYDIILGNSIITMYG 214
M + + T T + C +R G ++H V+ D + + N++IT Y
Sbjct: 280 MIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYW 339
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
+ G +D A ++F+ M +RD VSWN ++SGYV+ ++EA F MP K+ +SW MI+G
Sbjct: 340 KCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISG 399
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ G E++++ FN M + GF P
Sbjct: 400 LAQIGFAEEALKFFNRMK----------LQGF---------------------EPCDYAF 428
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+ + + + +L G Q+HA VV+ ES +S N+L+++Y++CG V A+ +F N+
Sbjct: 429 AGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPC 488
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+ +S+N+MI+ Q+G G +A+ LF +M EG++P++I+FL+V+SAC+H GLV+EG Y
Sbjct: 489 VDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKY 548
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F SM +Y + P EHYA ++D+L RAG +EA +++ SM FEP +W ALL R H
Sbjct: 549 FDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHG 608
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
N+DL AA+ L EL+P YV+LS++Y+V G+ D +VR + + ++K PGCSWI
Sbjct: 609 NIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWI 668
Query: 575 ILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+++KVH FL G + ++++I L+ +
Sbjct: 669 EVENKVHSFLVGDANHPEVRQIYNYLEQL 697
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 195/432 (45%), Gaps = 52/432 (12%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKN 132
N LI Y K + A +F+ + + D+VA +++ Y G + +R+IF P ++
Sbjct: 52 NRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRD 111
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF-RYREGVQVH 191
V + AM+ Y +LF M+R ++ T T + A + + Q+H
Sbjct: 112 SVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLH 171
Query: 192 GLVSRFGFDYDIILGNSIITMYGRL---------GFMDEANKVFSMMSKRDAVSWNSLIS 242
V + G + + N++I+ Y + M EA K+F M RD +SW ++I+
Sbjct: 172 CAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIIT 231
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
GYV N +++ A K V+W MI+G++ +G ++ E+F
Sbjct: 232 GYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFR------------- 278
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM-- 360
+M+ ++ ++ T +SV+S A G ++HA+ +K
Sbjct: 279 ------------------KMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVA 320
Query: 361 NMESDVS--IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
N DV+ + N+L++ Y KCG V A IF + ER++VS+N ++SG+ +EA +
Sbjct: 321 NPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKS 380
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F +M ++ N ++++ ++S +G EE +F MK L EP +A +
Sbjct: 381 FFNEMPEK----NILSWIIMISGLAQIGFAEEALKFFNRMK-LQGFEPCDYAFAGAIISC 435
Query: 479 GRAGSLAEAIDL 490
GSL L
Sbjct: 436 SVLGSLKHGRQL 447
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 162/372 (43%), Gaps = 81/372 (21%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVR-------------------------------RGM 53
EA ++F MP R+ +S+ +ITG+V+ RG+
Sbjct: 210 EARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGL 269
Query: 54 FYEAEELYVNMPARWRD----------SVCSN---------------------------- 75
+ EA E++ M SVC+N
Sbjct: 270 YLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMP 329
Query: 76 ---ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
ALI+ Y K G+ + A IF M E+D+V+W ++ GY + EA+ F++MPEKN
Sbjct: 330 VNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKN 389
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+++W M+ G ++ E+ F M+ G +C + G Q+H
Sbjct: 390 ILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHA 449
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V R+G++ + GN++ITMY R G +D A+ +F M DA+SWN++I+ +G+ +
Sbjct: 450 QVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQ 509
Query: 253 AYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDDVTWTAII 303
A LFE M + D +S+ T+I+ S G +++ + F+ M D+ + II
Sbjct: 510 AIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARII 569
Query: 304 SGFVNNEQYEEA 315
++ EA
Sbjct: 570 DLLCRAGKFSEA 581
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 137/326 (42%), Gaps = 81/326 (24%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VH + GF + N +I +Y + ++ A +F + + D V+ +LI+ Y G+
Sbjct: 35 VHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGD 94
Query: 250 IEEAYRLFERMP--GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
++ + ++F P +D V + MIT +S + +IEL
Sbjct: 95 LKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIEL-------------------- 134
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG-SQIHAHVVKMNMESDV 366
F +M R + RP+ T +SVL A A A + Q+H VVK
Sbjct: 135 -----------FCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVT 183
Query: 367 SIQNSLVSLYSKC---------------------------------------GNVVDAYR 387
S+ N+L+S Y KC N +DA +
Sbjct: 184 SVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAK 243
Query: 388 IFTNIDERNI-VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
F N + + V++N+MISG+A GL EA +FRKM + ++ TF SV+S C + G
Sbjct: 244 EFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAG 303
Query: 447 ---LVEEGFIYFKSMKTLYNIEPGPE 469
L +E YF +KT+ N P P+
Sbjct: 304 CFRLGKEMHAYF--LKTVAN--PAPD 325
>gi|357511423|ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 607
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/498 (36%), Positives = 293/498 (58%), Gaps = 3/498 (0%)
Query: 75 NALISGYLKVGRCEEAARIF-EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N +I+ Y+ ++A ++ E ++ ++V+W ++ Y + ++ ++FDKMP K+
Sbjct: 12 NYMINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDA 71
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W M+ G+ + E + FL M R G+ N T++ L A QVH L
Sbjct: 72 VSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHAL 131
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
G ++ +G+S+I Y L + + F+ +S +D SWN+L+S Y+ G+ +A
Sbjct: 132 AFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDA 191
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
F++MP ++ +SWTT++ G+ + K+ +F+ M E++ V+WTA+ISG+V N+++
Sbjct: 192 QTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFV 251
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+A + F+ M + + RPN T SSVL A A +++L G Q+H ++K + +DV SLV
Sbjct: 252 DALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLV 311
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y+KCG++ A+ +F +I ++N+VS+N++I G+A +GL AL F +MK G P+++
Sbjct: 312 DMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVG-TPDEV 370
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
TF++VLSAC H GLVEEG +F M T Y I+ EHY+CMVD+ GRAG EA +LI +
Sbjct: 371 TFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKN 430
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
M FEP +WGALL A H NL+L + AA+ + LE Y VLS + G
Sbjct: 431 MPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSV 490
Query: 554 NRVRMKKKLKRIRK-SPG 570
N +R K + I+K +PG
Sbjct: 491 NELRDTMKERGIKKQTPG 508
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 210/479 (43%), Gaps = 68/479 (14%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
+D NAL+S Y+++G+ +A F+ M ++++++W ++V+GY K +V +AR +FD M
Sbjct: 170 KDVTSWNALVSSYMELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDM 229
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
E+NVV+WTAM+ GY++ F D LF+ M + N T + + +AC G+
Sbjct: 230 SERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGL 289
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + + G D+I S++ MY + G MD A VF + ++ VSWN++I GY +G
Sbjct: 290 QLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHG 349
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
A F+RM ++ D+VT+ ++S V+
Sbjct: 350 LATRALEEFDRM----------------------------KVVGTPDEVTFVNVLSACVH 381
Query: 309 NEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
EE + F +ML K ++ S ++ ++ + + M E DV
Sbjct: 382 AGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENL---IKNMPFEPDVV 438
Query: 368 IQNSLVSLYSKCGNV----VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ +L++ N+ A RI ++ + VSY+ + + G+ L M
Sbjct: 439 LWGALLAACGLHSNLELGEYAAERI-RRLESSHPVSYSVLSKIQGEKGVWSSVNELRDTM 497
Query: 424 KDEGL---VP---NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH------- 470
K+ G+ P N F + S + + FK+ P H
Sbjct: 498 KERGIKKQTPGDKNCAQFSKLDSIKTKIEFILIASNPFKN---------SPLHGNDYIKA 548
Query: 471 YACMVDIL---------GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
Y C ++ G +A + LI +M+FEP +W ALL H NL L +
Sbjct: 549 YMCKGNLFLSYIWTYIDGILEVVATSFVLIKNMSFEPDVPLWDALLSTCGLHSNLKLGE 607
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 25/311 (8%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+ ++ + N + +A +F M RN VS+ AMI+G+V+ F +A +L
Sbjct: 198 MPQRNIISWTTLVNGYVKNK-QVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKL 256
Query: 61 YVNM------PARWRDS----VC--SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
+V M P + S C S++LI G L++ C I ++ + DV+ S+
Sbjct: 257 FVLMFKTETRPNHFTFSSVLDACAGSSSLIMG-LQLHPC-----IIKSGIANDVIWLTSL 310
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
VD Y K G + A +F+ + +KN+V+W A++ GY + F M+ G +
Sbjct: 311 VDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGTP-DE 369
Query: 169 ITLTILFEACGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA-NKVF 226
+T + AC EG + +++++G ++ + ++ +YGR G DEA N +
Sbjct: 370 VTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIK 429
Query: 227 SMMSKRDAVSWNSLIS--GYVHNGEIEE-AYRLFERMPGKDFVSWTTMITGFSSKGNLEK 283
+M + D V W +L++ G N E+ E A R+ VS++ + KG
Sbjct: 430 NMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSS 489
Query: 284 SIELFNMMPEK 294
EL + M E+
Sbjct: 490 VNELRDTMKER 500
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 211/659 (32%), Positives = 342/659 (51%), Gaps = 54/659 (8%)
Query: 14 TALIN--NNCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--W 68
++LIN C EA + +F + RN V + AM+ G+ + G + +L+ M W
Sbjct: 388 SSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFW 447
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEARE 123
D +++S + C E R + + E ++ ++VD Y K G + EAR+
Sbjct: 448 PDEFTYTSILSACACL-ECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQ 506
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
F+ + ++ V+W A++ GY++ + ++ F++F M G+A + ++L + C
Sbjct: 507 QFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQA 566
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+G QVH + + G + G+S+I MY + G ++ A VFS M R VS N++I+G
Sbjct: 567 LEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAG 626
Query: 244 YVHNGEIEEAYRLFERMPGK---------------------------------------- 263
Y N ++ EA LF+ M +
Sbjct: 627 YAQN-DLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYD 685
Query: 264 -DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
DF+ + ++ +S+ + I K + WTAIISG N EEA + + EM
Sbjct: 686 GDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEM 745
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
R + RP+Q T +SVL A + A+L G IH+ + + ++SD +++V +Y+KCG++
Sbjct: 746 HRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDM 805
Query: 383 VDAYRIFTNIDERN-IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ ++F + +N ++S+NSMI GFA+NG E AL +F +MK + P+ +TFL VL+A
Sbjct: 806 KSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTA 865
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C+H G V EG F M Y I P +H ACM+D+LGR G L EA + I+ + FEP
Sbjct: 866 CSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAM 925
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
+W LLGA R H + + AA+ L+ELEP++++PYV+LS++Y+ G + N VR +
Sbjct: 926 IWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMR 985
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
K +RK PGCSWI++ K +LF+AG K EI L+ + KE + SLL
Sbjct: 986 EKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKEDGYIAETDSLL 1044
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 243/451 (53%), Gaps = 50/451 (11%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIF 94
N+ ++I + + G +A +++ V P D+V A+I+GY++VG EEA ++F
Sbjct: 216 NSFCEGSLIDMYSKCGSLVDARKIFDAVVDP----DTVSWTAMIAGYVQVGLPEEALKVF 271
Query: 95 EAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
E M + D VA+ +++ GR+ +A ++F +MP NVVAW M+ G++K C
Sbjct: 272 EDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDI 331
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ D F +M + G+ TL + A G+ VH + G + ++ +G+S+I
Sbjct: 332 EAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLI 391
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----V 266
MY + M+ A KVF + +R+ V WN+++ GY NG + +LF M G F
Sbjct: 392 NMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEF 451
Query: 267 SWTTMITG-----------------------------------FSSKGNLEKSIELFNMM 291
++T++++ ++ G LE++ + F +
Sbjct: 452 TYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFI 511
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+D+V+W AII G+V E +EAF F M+ + P++++L+S+LS A L QG
Sbjct: 512 RNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGE 571
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
Q+H +VK +++ + +SL+ +Y KCG + A +F+ + R++VS N++I+G+AQN
Sbjct: 572 QVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQND 631
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
L EA++LF++M++EGL P++ITF S+L AC
Sbjct: 632 L-VEAIDLFQEMQNEGLNPSEITFASLLDAC 661
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 212/385 (55%), Gaps = 5/385 (1%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
++VD Y K G V A + F+++ +++++AW +++ Y + E F S++ G++
Sbjct: 121 AIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSP 180
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
N T I+ +C R G QVH V + GF+++ S+I MY + G + +A K+F
Sbjct: 181 NQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIF 240
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLE 282
+ D VSW ++I+GYV G EEA ++FE M D V++ T+IT G L+
Sbjct: 241 DAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLD 300
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+ +LF MP + V W +ISG V EA +F M + V+ + TL SVLSA A
Sbjct: 301 DACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIA 360
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ LN G +HA +K + S+V + +SL+++Y+KC + A ++F +DERN+V +N+
Sbjct: 361 SLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNA 420
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
M+ G+AQNG + + LF +M+ G P++ T+ S+LSAC + +E G S +
Sbjct: 421 MLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGR-QLHSFIIKH 479
Query: 463 NIEPGPEHYACMVDILGRAGSLAEA 487
N E +VD+ + G+L EA
Sbjct: 480 NFEYNLFVENTLVDMYAKCGALEEA 504
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 221/486 (45%), Gaps = 106/486 (21%)
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
GS++D Y K G +++AR+IFD + + + V+WTAM+ GY++V E+ +F M++ G+
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV 280
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ + + AC +G LG +D+A +
Sbjct: 281 PDQVAFVTVITAC--------------------------VG---------LGRLDDACDL 305
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------------------- 260
F M + V+WN +ISG+V G EA F+ M
Sbjct: 306 FVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEAL 365
Query: 261 --------------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+ +++I ++ +E + ++F+ + E++ V W A++ G+
Sbjct: 366 NYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGY 425
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N + + F EM P++ T +S+LSA A L G Q+H+ ++K N E ++
Sbjct: 426 AQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNL 485
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
++N+LV +Y+KCG + +A + F I R+ VS+N++I G+ Q +EA N+FR+M +
Sbjct: 486 FVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILD 545
Query: 427 GLVPNQITFLSVLSACNHVGLVEEG-----FIYFKSMKT-LY-------------NIEPG 467
G+ P++++ S+LS C ++ +E+G F+ ++T LY IE
Sbjct: 546 GIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAA 605
Query: 468 PEHYACMVD---------ILGRA-GSLAEAIDLINSMTFE---PPPGVWGALLGAGRTHL 514
++CM I G A L EAIDL M E P + +LL A
Sbjct: 606 RYVFSCMPSRSVVSMNAIIAGYAQNDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPY 665
Query: 515 NLDLAK 520
L+L +
Sbjct: 666 KLNLGR 671
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 127/296 (42%), Gaps = 74/296 (25%)
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R +H +FGF LG++I+ +Y + G ++ A K F+ + KRD ++WNS++S Y
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157
Query: 245 VHNGEIEEAYRLFERMP-------------------------------------GKDFVS 267
G +E+ F + G +F S
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217
Query: 268 WT--TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ ++I +S G+L + ++F+ + + D V+WTA+I+G+V EEA + F +M +
Sbjct: 218 FCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKL 277
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ P+Q+ +V++A L+ DA
Sbjct: 278 GLVPDQVAFVTVITACVGLGRLD-----------------------------------DA 302
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+F + N+V++N MISG + G EA++ F+ M G+ + T SVLSA
Sbjct: 303 CDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSA 358
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 28/203 (13%)
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
IHA +K S + +++V LY+KCGNV A + F +++R+I+++NS++S +++ G
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGS 162
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACN-----------HVGLVEEGFIYFKSMKTL 461
E+ + F +++ G+ PNQ T+ VLS+C H G+++ GF F S
Sbjct: 163 LEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGF-EFNSFCE- 220
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
++D+ + GSL +A + +++ +P W A++ AG + L L
Sbjct: 221 ----------GSLIDMYSKCGSLVDARKIFDAVV-DPDTVSWTAMI-AGYVQVGLPEEAL 268
Query: 522 AAQHLME---LEPDSATPYVVLS 541
M+ L PD V++
Sbjct: 269 KVFEDMQKLGLVPDQVAFVTVIT 291
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 213/661 (32%), Positives = 342/661 (51%), Gaps = 60/661 (9%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFV-----RRGMFYEAEELYVNMPARWRDS----- 71
S+ A ++F T P R+ V++ A++ + G E L+ + A +
Sbjct: 127 SLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTL 186
Query: 72 --VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
V L SG L I + +E DV G++V+ Y K GR+ +AR +FD M
Sbjct: 187 APVLKLCLNSGCLWAAEGVHGYAI-KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR 245
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC--GRFFRYREG 187
E++VV W M+ GY+++ ++ F LF R G+ + ++ ++ C G
Sbjct: 246 ERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELG 305
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
QVHG+ + G D D+ + NS++ MY ++G A +VF+ M D +SWNS+IS +
Sbjct: 306 KQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQS 365
Query: 248 GEIEEAYRLFERM------PGKDFVSWTTMIT------------------------GFSS 277
EE+ LF + P ++ T+ T GF S
Sbjct: 366 SLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS 425
Query: 278 K--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
G++ + +FN + DDV WT++ISG V+N ++A R + M
Sbjct: 426 DLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMR 485
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ V P++ T ++++ AS+ L QG Q+HA+V+K++ SD + SLV +Y+KCGN+
Sbjct: 486 QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIE 545
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
DAYR+F ++ RNI +N+M+ G AQ+G EEA+NLF+ MK G+ P++++F+ +LSAC+
Sbjct: 546 DAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 605
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H GL E + Y SM Y IEP EHY+C+VD LGRAG + EA +I +M F+ +
Sbjct: 606 HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 665
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
ALLGA R +++ K A L LEP + YV+LS++Y+ + D R K K
Sbjct: 666 RALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRK 725
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGL 622
++K PG SWI +K+ +HLF+ +S I ++ + K +E + P ++ LL +
Sbjct: 726 NVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDV 785
Query: 623 E 623
E
Sbjct: 786 E 786
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 248/521 (47%), Gaps = 60/521 (11%)
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
A+ + L +G+C A RI + D +++ Y K G + AR++FD PE+++V
Sbjct: 87 AISTHNLLLGKCTHA-RIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVT 145
Query: 136 WTAMVDGY-MKVDC----FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
W A++ Y VD ++G LF +R + +TL + + C V
Sbjct: 146 WNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGV 205
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG + G ++D+ + +++ +Y + G M +A +F M +RD V WN ++ GYV G
Sbjct: 206 HGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLE 265
Query: 251 EEAYRLFERM---------------------PGKDFVSWTTMITGFSSKGNLEKSI---- 285
+EA++LF G D + + G + K L+ +
Sbjct: 266 KEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVAN 325
Query: 286 ----------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
E+FN M D ++W ++IS + EE+ FI++L + ++P
Sbjct: 326 SLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKP 385
Query: 330 NQLTLSSVLSASAATAT-----LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ TL+S+ A+AA A L+QG QIHAH +K +SD+ + + ++ +Y KCG++V+
Sbjct: 386 DHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVN 445
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A +F I + V++ SMISG NG ++AL ++ +M+ ++P++ TF +++ A +
Sbjct: 446 AGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSC 505
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
V +E+G ++ L + P +VD+ + G++ +A L M +W
Sbjct: 506 VTALEQGRQLHANVIKL-DCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWN 563
Query: 505 ALLGAGRTHLN----LDLAKLAAQHLMELEPDSATPYVVLS 541
A+L H N ++L K H +EPD + +LS
Sbjct: 564 AMLVGLAQHGNAEEAVNLFKSMKSH--GIEPDRVSFIGILS 602
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 202/449 (44%), Gaps = 58/449 (12%)
Query: 15 ALIN--NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------P 65
AL+N + C + +A +F M R+ V + M+ G+V+ G+ EA +L+ P
Sbjct: 223 ALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRP 282
Query: 66 ARWRDSVCSNALI---SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
+ + N + + L++G+ + ++ ++ DV S+V+ Y K G AR
Sbjct: 283 DEFSVQLILNGCLWAGTDDLELGKQVHGIAV-KSGLDSDVSVANSLVNMYSKMGCAYFAR 341
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM-----AFNSITLTILFEA 177
E+F+ M ++++W +M+ + E+ +LF+ + G+ SITL +A
Sbjct: 342 EVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKA 401
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
CG +G Q+H + GFD D+ + + I+ MY + G M A VF+ +S D V+W
Sbjct: 402 CGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAW 461
Query: 238 NSLISGYVHNGEIEEAYRLFERM------PGK---------------------------- 263
S+ISG V NG ++A R++ RM P +
Sbjct: 462 TSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIK 521
Query: 264 -DFVS----WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
D VS T+++ ++ GN+E + LF M ++ W A++ G + EEA
Sbjct: 522 LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNL 581
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ-IHAHVVKMNMESDVSIQNSLVSLYS 377
F M + P++++ +LSA + ++ + +H+ +E ++ + LV
Sbjct: 582 FKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALG 641
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISG 406
+ G V +A ++ + + S N + G
Sbjct: 642 RAGLVQEADKVIETMPFKASASINRALLG 670
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 23/219 (10%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L + +T L G HA +V D + N+L+++YSKCG++ A ++F ER+
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 397 IVSYNSMISGFA-----QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+V++N+++ +A +G +E L+LFR ++ ++T VL C + G
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLC-----LNSG 197
Query: 452 FIYFKSMKTLYNIEPGPE----HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
++ Y I+ G E +V+I + G + +A L + M E +W +L
Sbjct: 198 CLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMML 256
Query: 508 GAGRTHLNLDLAKLAAQ-----HLMELEPDSATPYVVLS 541
+ ++ L L K A Q H L PD + ++L+
Sbjct: 257 ---KGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILN 292
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 197/628 (31%), Positives = 329/628 (52%), Gaps = 98/628 (15%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+A ++F MP RN ++ ++I+ + G EA L+ +MP D N+++SG+ +
Sbjct: 68 DARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEP--DQCSWNSMVSGFAQH 125
Query: 85 GRCEEAARIF----------------------------------EAMVEK-----DVVAW 105
R EE+ F A+V K DV
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+++D Y K G V A E+F M E+N+V W +++ Y + + ++F+ M G+
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMDEANK 224
+ +TL + AC +EG+Q+H V + F D++LGN+++ MY +
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCS------- 298
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKS 284
++ EA R+F+RM ++ VS T+M++G++ +++ +
Sbjct: 299 ------------------------KVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAA 334
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+F+ M +++ V+W A+I+G+ N + EEA R F + R+ + P T ++L
Sbjct: 335 RFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLL------ 388
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+SD+ + NSL+ +Y KCG++ D R+F + ER+ VS+N++I
Sbjct: 389 ------------------KSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAII 430
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
G+AQNG G EAL +FRKM G P+ +T + VL AC+H GLVEEG YF SM+ + +
Sbjct: 431 VGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGL 489
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
P +HY CMVD+LGRAG L EA +LI +M P VWG+LL A + H N+++ K AA+
Sbjct: 490 IPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAE 549
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
L+E++P ++ PYV+LS++Y+ +G+ D RVR + + + K PGCSWI ++ +VH+FL
Sbjct: 550 KLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFL 609
Query: 585 AGRKSCLDLKEIEVTLQTISKGTKEFDW 612
KS K+I L+ +++ K +
Sbjct: 610 VKDKSHPHRKQIYSVLKMLTEQMKRVGY 637
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 163/295 (55%), Gaps = 32/295 (10%)
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
NS L ++C R R VH + F +I + N +I +YG+ +D+A K
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK-- 71
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
LF+RMP ++ +W ++I+ + G L+++
Sbjct: 72 -----------------------------LFDRMPQRNTFTWNSLISVLTKSGFLDEAAR 102
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
LF MPE D +W +++SGF ++++EE+ +F++M R+D N+ + S LSA A
Sbjct: 103 LFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMD 162
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
LN G+Q+HA V K +DV + ++L+ +YSKCG+V A +F+ + ERN+V++NS+I+
Sbjct: 163 LNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITC 222
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT 460
+ QNG EAL +F +M D GL P+++T SV+SAC + ++EG I+ + +KT
Sbjct: 223 YEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKT 277
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 181/403 (44%), Gaps = 84/403 (20%)
Query: 12 MITALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---- 64
M +ALI+ + C S+ A E+F+ M RN V++ ++IT + + G EA E++V M
Sbjct: 184 MGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSG 243
Query: 65 ---------------------------------PARWRDS-VCSNALISGYLKVGRCEEA 90
++RD V NAL+ Y K + EA
Sbjct: 244 LEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEA 303
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
R+F+ M ++VV+ SMV GY + V AR +F KM ++NVV+W A++ GY + E
Sbjct: 304 RRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENE 363
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ LF ++R + T L ++ DI +GNS+I
Sbjct: 364 EALRLFRLLKRESIWPTHYTFGNLLKS------------------------DIFVGNSLI 399
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFV 266
MY + G +++ ++VF M +RD VSWN++I GY NG EA ++F +M D V
Sbjct: 400 DMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHV 459
Query: 267 SWTTMITGFSSKGNLEK------SIELFNMMPEKDDVTWTAIISGFVN--NEQYEEAFRW 318
+ ++ S G +E+ S+E ++P KD T + G NE +
Sbjct: 460 TMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEA-----KN 514
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
IE + V P+ + S+L+A + G +++++
Sbjct: 515 LIEAM--PVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEID 555
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 41/265 (15%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
++R PN + +L + + + +HA ++ ++ IQN L+ +Y KC
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 382 VVDAYRIFTNIDERNI-------------------------------VSYNSMISGFAQN 410
+ DA ++F + +RN S+NSM+SGFAQ+
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF---IYFKSMKTLYNIEPG 467
EE+L F KM E + N+ +F S LSAC GL++ ++ K+ Y+ +
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSAC--AGLMDLNMGTQVHALVSKSRYSTD-- 181
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
+ ++D+ + GS+A A ++ + M E W +L+ + A +M
Sbjct: 182 VYMGSALIDMYSKCGSVACAEEVFSGM-IERNLVTWNSLITCYEQNGPASEALEVFVRMM 240
Query: 528 E--LEPDSATPYVVLSDLYSVIGKK 550
+ LEPD T V+S S+ K
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALK 265
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 206/674 (30%), Positives = 339/674 (50%), Gaps = 87/674 (12%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA 96
N+ +++ F++ G A + + ++D N ++SGY G ++A +
Sbjct: 224 NSCVKGSILDMFIKCGRMDIARRFFEEI--EFKDVFMWNIMVSGYTSKGEFKKALKCISD 281
Query: 97 M----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-----EKNVVAWTAMVDGYMKVD 147
M V+ D V W +++ GY + G+ EA + F +M + NVV+WTA++ G +
Sbjct: 282 MKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNG 341
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILG 206
+ +F M G+ NSIT+ AC R G ++HG + D D+++G
Sbjct: 342 YDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 401
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS--------------------------- 239
NS++ Y + ++ A + F M+ + D VSWN+
Sbjct: 402 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIE 461
Query: 240 --------LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG----------------- 274
L++G+ G+ + A F+RM TT I+G
Sbjct: 462 PDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEI 521
Query: 275 ----------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
+S +LE + +F+ + +D V W +IIS + +
Sbjct: 522 HGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRS 581
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
A EM +V N +T+ S L A + A L QG +IH +++ +++ I NSL
Sbjct: 582 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSL 641
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ +Y +CG++ + RIF + +R++VS+N MIS + +G G +A+NLF++ + GL PN
Sbjct: 642 IDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNH 701
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
ITF ++LSAC+H GL+EEG+ YFK MKT Y ++P E YACMVD+L RAG E ++ I
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
M FEP VWG+LLGA R H N DLA+ AA++L ELEP S+ YV+++++YS G+ D
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 821
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
++R K + + K PGCSWI +K K+H F+ G S +++I ++++ KE +
Sbjct: 822 AAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGY 881
Query: 613 -PKHDWSLLGLERD 625
P ++ L ++ D
Sbjct: 882 VPDTNFVLQDVDED 895
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 202/364 (55%), Gaps = 10/364 (2%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+++ YC+ G V +AR +FDKM E+NV +WTA+++ Y + +E+ LF M G+ +
Sbjct: 130 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPD 189
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+F+AC YR G V+ + GF+ + + SI+ M+ + G MD A + F
Sbjct: 190 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFE 249
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEK 283
+ +D WN ++SGY GE ++A + M D V+W +I+G++ G E+
Sbjct: 250 EIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEE 309
Query: 284 SIELFNMMPEKDD-----VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+ + F M D V+WTA+I+G N EA F +M+ + V+PN +T++S +
Sbjct: 310 ASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAV 369
Query: 339 SASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
SA + L G +IH + +K+ ++SD+ + NSLV Y+KC +V A R F I + ++
Sbjct: 370 SACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDL 429
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
VS+N+M++G+A G EEA+ L +MK +G+ P+ IT+ +++ G + +F+
Sbjct: 430 VSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQR 489
Query: 458 MKTL 461
M ++
Sbjct: 490 MHSM 493
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 17/291 (5%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C + + R G QVH + G D LG+ ++ +Y + G +++A ++F MS+R+
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFN 289
SW +++ Y G+ EE +LF M + D + + S N ++++
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214
Query: 290 MMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
M E + +I+ F+ + + A R+F E+ KDV + +S S
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-----ERNIVSY 400
L S + VK D N+++S Y++ G +A + F + + N+VS+
Sbjct: 275 ALKCISDMKLSGVK----PDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++I+G QNG EAL++FRKM EG+ PN IT S +SAC ++ L+ G
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 381
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 109/223 (48%)
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ G +E + +F+ M E++ +WTAI+ + YEE + F M+ + VRP+
Sbjct: 134 YCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVF 193
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
V A + G ++ +++ + E + ++ S++ ++ KCG + A R F I+
Sbjct: 194 PKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF 253
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+++ +N M+SG+ G ++AL MK G+ P+Q+T+ +++S G EE Y
Sbjct: 254 KDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKY 313
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
F M L + +P + ++ + G EA+ + M E
Sbjct: 314 FLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+S+L L G Q+HA +V ++ + + L+ +Y + G V DA R+F + E
Sbjct: 93 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
RN+ S+ +++ + G EE + LF M +EG+ P+ F V AC+ +
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 203
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 203/552 (36%), Positives = 309/552 (55%), Gaps = 57/552 (10%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA 96
++ S+A I + G F EA LYV M RW + AL S R A R+
Sbjct: 69 DSFSWACAIRFSTQHGQFKEAFALYVQM-QRWGLWPTTFALSSALKACARI--AYRMGGL 125
Query: 97 MVEKDVVAWG------------SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
+ V +G ++VD YCK G + AR++FD+M E+NVV+W +M+ GY+
Sbjct: 126 SIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 185
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
K DL ++ R F+ I D+I
Sbjct: 186 KSG------DLVVAQR----VFDEIP-----------------------------QKDVI 206
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
NS+I+ Y R G M++A +F M +R+ SWN++ISGYV G+I+ A F+ MP ++
Sbjct: 207 SWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMPQRN 266
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
VSW TMI+G+S G+++ + ELF+ + KD + + A+I+ + N + +EA + F ML
Sbjct: 267 NVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLN 326
Query: 325 KDV--RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
DV +P+++TL+SV+SA + L G I +++ ++ +E D + +L+ LY+KCG++
Sbjct: 327 PDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSI 386
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
AY +F + ++++V+Y +MI G NG +A+ LF +M D + PN ITF+ +L+A
Sbjct: 387 DKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAY 446
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
NH GLVEEG+ F SMK YN+ P +HY MVD+ GRAG L EA++LI SM +P GV
Sbjct: 447 NHAGLVEEGYHCFTSMKK-YNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGV 505
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WGALL A R H N++ ++AAQH ELEPD+ +LS++Y+ + D R+R K
Sbjct: 506 WGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYCSLLSNIYASGERWDDVKRLRKVTKE 565
Query: 563 KRIRKSPGCSWI 574
K K PGCSW+
Sbjct: 566 KGFSKIPGCSWM 577
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 166/307 (54%), Gaps = 15/307 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
MA+R S+N+M+ + + + A +F +P ++ +S+ +MI+G+ R G +A L
Sbjct: 169 MAERNVVSWNSMLAGYLKSG-DLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSL 227
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ NA+ISGY++ G + A F+AM +++ V+W +M+ GY K G V
Sbjct: 228 FQQMPE--RNFASWNAMISGYVEFGDIDSARSFFDAMPQRNNVSWMTMISGYSKCGDVDS 285
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF--NSITLTILFEAC 178
A E+FD++ K+++ + AM+ Y + ++ LF +M + + +TL + AC
Sbjct: 286 ACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISAC 345
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ R G + + R G + D L +++ +Y + G +D+A ++F + K+D V++
Sbjct: 346 SQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYT 405
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK------SIELF 288
++I G NG+ +A +LF+ M +++ ++T ++ G +E+ S++ +
Sbjct: 406 AMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMKKY 465
Query: 289 NMMPEKD 295
N++P D
Sbjct: 466 NLVPSVD 472
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 187/444 (42%), Gaps = 81/444 (18%)
Query: 185 REGVQVHGLVSRFGFDY-DIILGNSIITMYGRLG--FMDEANKVFSMMSKRDAVSWNSLI 241
++ QVH L+ G + + IL I+ + V D+ SW I
Sbjct: 18 KQAKQVHALILIHGLSHLEPILARQILLSASNYSATVAQYVHSVLHHSKSPDSFSWACAI 77
Query: 242 SGYVHNGEIEEAYRLFERMP---------------------------------------- 261
+G+ +EA+ L+ +M
Sbjct: 78 RFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIHGQVQKFGFS 137
Query: 262 -GKDFVSWTTMITGFSSK-GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
G D + T + F K G++E + ++F+ M E++ V+W ++++G++ + A R F
Sbjct: 138 GGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVF 197
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES------------DVS 367
E+ +KDV ++ +S++S A + + + + + N S D+
Sbjct: 198 DEIPQKDV----ISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDID 253
Query: 368 IQNS---------------LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
S ++S YSKCG+V A +F + ++++ +N+MI+ +AQN
Sbjct: 254 SARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSR 313
Query: 413 GEEALNLFRKM--KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
+EAL LF M D + P+++T SV+SAC+ +G + G M+ L IE
Sbjct: 314 PKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRL-GIEMDGHL 372
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL-MEL 529
++D+ + GS+ +A +L + + + +LG G +D KL + + ++
Sbjct: 373 ATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQI 432
Query: 530 EPDSATPYVVLSDLYSVIGKKRDG 553
P+S T ++ L Y+ G +G
Sbjct: 433 FPNSIT-FIGLLTAYNHAGLVEEG 455
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 299/545 (54%), Gaps = 40/545 (7%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
R +F ++ + N+ W M+ G + DCF+D + + MR G N+ T + +AC R
Sbjct: 65 TRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACAR 124
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ GV++H LV + GFD D+ + S++ +Y + G++++A+KVF + ++ VSW ++
Sbjct: 125 LLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAI 184
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFV----------------------SW---------- 268
ISGY+ G+ EA +F R+ + W
Sbjct: 185 ISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGM 244
Query: 269 -------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
T+++ ++ GN+EK+ +F+ MPEKD V+W A+I G+ N +EA F++
Sbjct: 245 VRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQ 304
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M R++V+P+ T+ VLSA A L G + V + + + +L+ LY+KCG+
Sbjct: 305 MQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGS 364
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ A+ +F + E++ V +N++ISG A NG + + LF +++ G+ P+ TF+ +L
Sbjct: 365 MSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCG 424
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C H GLV+EG YF SM +++ P EHY CMVD+LGRAG L EA LI +M E
Sbjct: 425 CTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAI 484
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VWGALLGA R H + LA+LA + L+ELEP ++ YV+LS++YS K + +VR+
Sbjct: 485 VWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMN 544
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
KRI+K PGCSWI + VH FL G K ++I L ++K K + P D+ L
Sbjct: 545 EKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLF 604
Query: 621 GLERD 625
+E +
Sbjct: 605 DIEEE 609
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 152/280 (54%), Gaps = 16/280 (5%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY-----VNMPARWRDSVCSNALIS 79
+A ++F +P +N VS+ A+I+G++ G F EA +++ +N+ DS ++S
Sbjct: 165 DAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAP---DSFTIVRVLS 221
Query: 80 GYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
++G I + ++E ++V S+VD Y K G + +AR +FD MPEK++V+
Sbjct: 222 ACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVS 281
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W AM+ GY ++ DLFL M+R + + T+ + AC R G V GLV
Sbjct: 282 WGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVD 341
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R F Y+ +LG ++I +Y + G M A +VF M ++D V WN++ISG NG ++ ++
Sbjct: 342 RNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFG 401
Query: 256 LF---ERMPGK-DFVSWTTMITGFSSKGNLEKSIELFNMM 291
LF E++ K D ++ ++ G + G +++ FN M
Sbjct: 402 LFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSM 441
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/542 (22%), Positives = 217/542 (40%), Gaps = 117/542 (21%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMP----MRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+N MI L++N+C +A E + M + N ++ ++ R +++ +
Sbjct: 80 WNTMIRGLVSNDC-FDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLV 138
Query: 65 PARWRDS--VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
D +L+ Y K G E+A ++F+ + +K+VV+W +++ GY G+ EA
Sbjct: 139 VKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAI 198
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
++F ++ E N +A +S T+ + AC +
Sbjct: 199 DMFRRLLEMN-------------------------------LAPDSFTIVRVLSACTQLG 227
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G +H + G ++ +G S++ MY + G M++A VF M ++D VSW ++I
Sbjct: 228 DLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQ 287
Query: 243 GYVHNGEIEEAYRLF----------------------ERMPGKDFVSW------------ 268
GY NG +EA LF R+ + W
Sbjct: 288 GYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLY 347
Query: 269 -----TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
T +I ++ G++ ++ E+F M EKD V W AIISG N + +F F ++
Sbjct: 348 NPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVE 407
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ ++P+ T +L +++G + NS+
Sbjct: 408 KLGIKPDGNTFIGLLCGCTHAGLVDEGRRYF---------------NSM----------- 441
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
YR F+ +I Y M+ + GL +EA L R M E N I + ++L AC
Sbjct: 442 --YRFFSLTP--SIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEA---NAIVWGALLGACR 494
Query: 444 HVGLVEEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAGSLAEAIDL---INSMTFEPP 499
+ + + ++K L +EP +Y + +I EA + +N + P
Sbjct: 495 ---IHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKP 551
Query: 500 PG 501
PG
Sbjct: 552 PG 553
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 1 MADRTSASYNAMI-TALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGF-------V 49
+ DR YN ++ TALI+ C S+ A+E+F M ++ V + A+I+G +
Sbjct: 339 LVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKI 398
Query: 50 RRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVA 104
G+F + E+L + D L+ G G +E R F +M + +
Sbjct: 399 SFGLFGQVEKLGIK-----PDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEH 453
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAWTAMV 140
+G MVD + G + EA ++ MP E N + W A++
Sbjct: 454 YGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 198/625 (31%), Positives = 324/625 (51%), Gaps = 51/625 (8%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------ 64
TALIN I A +F +P++N V++ A+ITG+ + G A EL+ M
Sbjct: 153 TALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVR 212
Query: 65 PARW-RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
P R+ S S G+L+ GR + + VE D +++D YCK R+ AR+
Sbjct: 213 PDRFVLASAVSACSALGFLEGGR-QTHGYAYRIAVETDASVINALIDLYCKCSRLSLARK 271
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD M +N+V+WT M+ GYM+ C + +F + + G + + +CG
Sbjct: 272 LFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAA 331
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+G QVH + + D + NS+I MY + + EA VF +++ DA+S+N++I G
Sbjct: 332 IWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEG 391
Query: 244 YVHNGEIEEAYRLFERM------PGK---------------------------------D 264
Y G++ A +F +M P D
Sbjct: 392 YSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLD 451
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+ +++I +S +E + +FN+M +D V W A+I G NEQ EEA + F ++
Sbjct: 452 LYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQV 511
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ PN+ T ++++ ++ ++ G Q HA ++K +SD + N+L+ +Y+KCG + +
Sbjct: 512 SGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKE 571
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
+F + ++++ +NSMIS +AQ+G EEAL +FR M G+ PN +TF+ VLSAC H
Sbjct: 572 GRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAH 631
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
GLV+EG +F MKT Y IEPG EHYA +V++ GR+G L A + I M EP VW
Sbjct: 632 AGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWR 691
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
+LL A N+++ + A + + +P + P V++S++Y+ G D ++R
Sbjct: 692 SLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAG 751
Query: 565 IRKSPGCSWIILKDKVHLFLA-GRK 588
+ K PG SWI + +VH F+A GR+
Sbjct: 752 VVKEPGYSWIEVMKEVHTFIARGRE 776
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 202/384 (52%), Gaps = 43/384 (11%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR--GGMA 165
++ Y K GRV +AR +FD+MP KN+V+W + + + + C ED LF + +R GG A
Sbjct: 52 LLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEA 111
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
N L AC + G QVHG+ R G D ++ +G ++I +Y ++G +D A V
Sbjct: 112 PNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLV 171
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS-----WTTMITGFSSKGN 280
F + ++ V+W ++I+GY G+ A LF +M G D V + ++ S+ G
Sbjct: 172 FDALPVKNPVTWTAVITGYSQIGQGGVALELFGKM-GLDGVRPDRFVLASAVSACSALGF 230
Query: 281 LEKSIE-----------------------------------LFNMMPEKDDVTWTAIISG 305
LE + LF+ M ++ V+WT +I+G
Sbjct: 231 LEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAG 290
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
++ N EA F ++ ++ +P+ +S+L++ + A + QG Q+HAH +K N+ESD
Sbjct: 291 YMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESD 350
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
++NSL+ +Y+KC ++ +A +F + E + +SYN+MI G+++ G A+++F KM+
Sbjct: 351 EYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRY 410
Query: 426 EGLVPNQITFLSVLSACNHVGLVE 449
L P+ +TF+S+L + +E
Sbjct: 411 CSLKPSPLTFVSLLGVSSSQSAIE 434
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 211/465 (45%), Gaps = 47/465 (10%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+ +A +F MP +N VS+ + I+ + G +A L+ + L++ L
Sbjct: 62 VRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASAL 121
Query: 83 KVGRCEEAARIFEAM--------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+ A + + ++ +V ++++ Y K G + A +FD +P KN V
Sbjct: 122 RACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPV 181
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
WTA++ GY ++ +LF M G+ + L AC G Q HG
Sbjct: 182 TWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYA 241
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
R + D + N++I +Y + + A K+F M R+ VSW ++I+GY+ N EA
Sbjct: 242 YRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAM 301
Query: 255 RLFERMPGK----DFVSWTTMITGFSS---------------KGNLE------------- 282
+F ++ + D + +++ S K NLE
Sbjct: 302 AMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMY 361
Query: 283 -------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
++ +F + E D +++ A+I G+ A F +M ++P+ LT
Sbjct: 362 AKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFV 421
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L S++ + + QIH +VK D+ +SL+ +YSK V DA +F + R
Sbjct: 422 SLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNR 481
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
++V +N+MI G AQN GEEA+ LF +++ GL PN+ TF+++++
Sbjct: 482 DMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVT 526
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 188/393 (47%), Gaps = 74/393 (18%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL---FE 258
D+ L N ++ Y +LG + +A ++F M ++ VSW S IS + +G E+A L F+
Sbjct: 45 DLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQ 104
Query: 259 RMPGKD------------------FVSW--------------------TTMITGFSSKGN 280
R G + VS+ T +I ++ G
Sbjct: 105 RASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGC 164
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
++ ++ +F+ +P K+ VTWTA+I+G+ Q A F +M VRP++ L+S +SA
Sbjct: 165 IDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSA 224
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+A L G Q H + ++ +E+D S+ N+L+ LY KC + A ++F ++ RN+VS+
Sbjct: 225 CSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSW 284
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMK 459
+MI+G+ QN EA+ +F ++ EG P+ S+L++C + + +G ++ ++K
Sbjct: 285 TTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIK 344
Query: 460 -----------TLYNIEPGPEH------------------YACMVDILGRAGSLAEAIDL 490
+L ++ EH Y M++ R G LA AID+
Sbjct: 345 ANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDV 404
Query: 491 INSM---TFEPPPGVWGALLGAGRTHLNLDLAK 520
+ M + +P P + +LLG + ++L+K
Sbjct: 405 FSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSK 437
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
HA V D+ + N L+ YSK G V DA R+F + +N+VS+ S IS AQ+G
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93
Query: 414 EEALNLFRKMK--DEGLVPNQITFLSVLSAC 442
E+A+ LF + G PN+ S L AC
Sbjct: 94 EDAVALFAAFQRASGGEAPNEFLLASALRAC 124
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 206/654 (31%), Positives = 347/654 (53%), Gaps = 50/654 (7%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM- 64
S+S+ + + + N S+ AF F +P + +++ A++ G V G F +A Y +M
Sbjct: 66 SSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSML 125
Query: 65 -----PARWRDSVCSNALISGY-LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
P + + A S + L++GR + +V +++D + K G V
Sbjct: 126 QHGVTPDNYTYPLVLKACSSLHALQLGR--WVHETMHGKTKANVYVQCAVIDMFAKCGSV 183
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYM-KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+AR +F++MP++++ +WTA++ G M +C E LF MR G+ +S+ + + A
Sbjct: 184 EDARRMFEEMPDRDLASWTALICGTMWNGECLE-ALLLFRKMRSEGLMPDSVIVASILPA 242
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
CGR + G+ + R GF+ D+ + N++I MY + G EA++VFS M D VSW
Sbjct: 243 CGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSW 302
Query: 238 NSLISGYVHNGEIEEAYRLFERM--------------------------PGK-------- 263
++LI+GY N +E+Y+L+ M GK
Sbjct: 303 STLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLK 362
Query: 264 -----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
D V + +I +++ G+++++ +F +KD + W ++I G+ +E AF
Sbjct: 363 EGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFT 422
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F + + RPN +T+ S+L L QG +IH +V K + +VS+ NSL+ +YSK
Sbjct: 423 FRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSK 482
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG + ++F + RN+ +YN+MIS +G GE+ L + +MK+EG PN++TF+S+
Sbjct: 483 CGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISL 542
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSAC+H GL++ G++ + SM Y IEP EHY+CMVD++GRAG L A I M P
Sbjct: 543 LSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTP 602
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
V+G+LLGA R H ++L +L A+ +++L+ D + YV+LS+LY+ + D ++VR
Sbjct: 603 DANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRS 662
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
K K + K PG SWI + +++F A +IE TL ++ K D+
Sbjct: 663 MIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKIEETLNSLLLVMKSEDY 716
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 200/630 (31%), Positives = 334/630 (53%), Gaps = 60/630 (9%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---PA 66
N + T +NN A ++F M R+ +S+ +I+G+V EA L+ M P
Sbjct: 10 NLVKTGHLNN------ARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPG 63
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARIFEAM----VEKDVV----AWGSMVDGYCKKGRV 118
D ++S LK + E++ V+ D V ++VD Y K G+V
Sbjct: 64 LHMDPF----ILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKV 119
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
E +F +MP +NVV+WTA++ G ++ ++ F M + ++ T + +AC
Sbjct: 120 DEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKAC 179
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G ++H + GF + N++ TMY + G +D ++F M++RD VSW
Sbjct: 180 ADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWT 239
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIEL------- 287
++I V G+ E A + F RM D ++ +I+G ++ G +E +L
Sbjct: 240 TIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRR 299
Query: 288 ----------------------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
F + +D ++W+ +ISG+ EEAF +
Sbjct: 300 GLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYL 359
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
M R+ RPN+ +SVLS A L QG Q+HAHV+ + +E + +Q++L+++YSKC
Sbjct: 360 SWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKC 419
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G++ +A +IF + NIVS+ +MI+G+A++G +EA++LF+K+ GL P+ +TF++VL
Sbjct: 420 GSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVL 479
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
+AC+H GLV+ GF YF S+ ++ I P +HY CM+D+L RAG L +A +I SM F+
Sbjct: 480 AACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRD 539
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
VW LL A R H ++D K AA+ +++L+P+ A ++ L+++Y+ GK ++ VR
Sbjct: 540 DVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKM 599
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
K K + K PG SWI KD+V F++G +S
Sbjct: 600 MKSKGVVKEPGWSWIKFKDRVSAFVSGDRS 629
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 40/285 (14%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM---PGK 263
N ++ + G ++ A ++F M +RD +SW ++ISGYV+ EA LF +M PG
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 264 DF-----------------VSWTTMITGFSSK--------------------GNLEKSIE 286
VS+ + G+S K G +++
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+F MP ++ V+WTAII+G V +EA +F +M + V + T SS L A A +
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
LN G +IH +K + + N+L ++Y+KCG + R+F ++ +R++VS+ ++I
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
Q G E A+ FR+M++ + PN+ TF +V+S C +G +E G
Sbjct: 245 NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWG 289
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 298/544 (54%), Gaps = 39/544 (7%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ D + +++D Y K G A +F ++P+ ++V+W A++ G + + + L
Sbjct: 220 DSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGK 279
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M +A + TL+ +AC + G Q+H + + + D +G +I MY + G
Sbjct: 280 MGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGL 339
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--PGKDF----------- 265
+ +A VF +M +D + WNS+ISGY + G EA LF M G +F
Sbjct: 340 LQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKS 399
Query: 266 ------------VSWTTMITGFSSKGN--------------LEKSIELFNMMPEKDDVTW 299
V ++ +G+ G LE + ++F + P +D V +
Sbjct: 400 TAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAY 459
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
T++I+ + EEA + ++ M +D++P+ SS+ +A A + QG QIH HV+K
Sbjct: 460 TSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLK 519
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ SDV NSLV++Y+KCG++ DA IF I R IVS+++MI G AQ+G G +AL L
Sbjct: 520 CGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQL 579
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F +M G++PN IT +SVLSACNH GLV E +F M+ L+ I P EHYACMVDILG
Sbjct: 580 FYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILG 639
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
R G L EA+ L+ M F+ VWGALLGA R H N++L + AA+ L+ LEP+ + +++
Sbjct: 640 RVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHIL 699
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
L+++Y+ G + +VR K ++K PG SWI LKDKV+ F+ G +S KEI V
Sbjct: 700 LANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVK 759
Query: 600 LQTI 603
L +
Sbjct: 760 LDDL 763
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 220/468 (47%), Gaps = 60/468 (12%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKM----PEKNVVAWTAMVDGYMKVDCFEDG-- 152
E D+V+W +++ GY + GR EA + +M + N +++++ G E G
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 153 ---FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
L M G++ N +L+ + AC G++VHG + + G+D D N++
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG------- 262
+ MY + G + A VF + K D VSWN++I+G V + + + A +L +M
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 263 --------------------------------KDFVSWTTMITGFSSKGNLEKSIELFNM 290
D +I +S G L+ + +F++
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDL 349
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP KD + W +IISG+ N EA F M ++ + NQ TLS++L ++A +
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q+H +K + D + NSL+ Y KC + DA ++F ++V+Y SMI+ ++Q
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---FIYFKSMKTLYNIEPG 467
GLGEEAL ++ +M+D + P+ F S+ +AC ++ E+G ++ L ++ G
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAG 529
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTH 513
+V++ + GS+ +A + N +++ G+ W A++G H
Sbjct: 530 NS----LVNMYAKCGSIDDASCIFNEISWR---GIVSWSAMIGGLAQH 570
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 147/288 (51%), Gaps = 10/288 (3%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---PARWRDSVCSNALIS 79
+ +A +F MP ++ + + ++I+G+ G EA L+ NM + + S L S
Sbjct: 340 LQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKS 399
Query: 80 --GYLKVGRCEEAARI-FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
G G CE+ I ++ + D S++D Y K + +A ++F+ P +++VA+
Sbjct: 400 TAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAY 459
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
T+M+ Y + E+ ++L M+ + ++ + LF AC Y +G Q+H V +
Sbjct: 460 TSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLK 519
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
G D+ GNS++ MY + G +D+A+ +F+ +S R VSW+++I G +G +A +L
Sbjct: 520 CGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQL 579
Query: 257 FERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
F +M + ++ ++++ + G + ++ F +M + +T T
Sbjct: 580 FYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPT 627
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 149/354 (42%), Gaps = 73/354 (20%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
++ + +M ++ A G V+ G + + ++M DS LI Y K G
Sbjct: 282 SYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEP---DSFVGVGLIDMYSKCG 338
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
++A +F+ M KDV+ W S++ GY G IEA
Sbjct: 339 LLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEA------------------------ 374
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
LF +M + G+ FN TL+ + ++ QVH + + G+ YD +
Sbjct: 375 -------MSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYV 427
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
NS++ YG+ +++A KVF + D V++ S+I+ Y G EEA +++ RM +D
Sbjct: 428 ANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDI 487
Query: 266 ---------------------------------------VSWTTMITGFSSKGNLEKSIE 286
+ +++ ++ G+++ +
Sbjct: 488 KPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASC 547
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+FN + + V+W+A+I G + +A + F +ML+ + PN +TL SVLSA
Sbjct: 548 IFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSA 601
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 142/272 (52%), Gaps = 20/272 (7%)
Query: 264 DFVSWTTMITGFSSKGNLEKSI----ELFNMMPEKDDVTWTAIISGFV---NNEQYEEAF 316
D VSW+ +I+G+ G E+++ E++ + + ++ T+++++ G N E ++
Sbjct: 112 DLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIH 171
Query: 317 R--WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
R EM+ + PN+ +LS+VL+A A N G ++H +++K+ +SD N+L+
Sbjct: 172 RVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLD 231
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+K G A +F I + +IVS+N++I+G + + AL L KM + P+ T
Sbjct: 232 MYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFT 291
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
S L AC +GLV+ G ++ + ++EP ++D+ + G L +A M
Sbjct: 292 LSSALKACAAIGLVKLGRQLHSALMKM-DMEPDSFVGVGLIDMYSKCGLLQDA-----RM 345
Query: 495 TFEPPPG----VWGALLGAGRTHLNLDLAKLA 522
F+ P VW +++ +G ++ D+ ++
Sbjct: 346 VFDLMPXKDVIVWNSII-SGYSNCGYDIEAMS 376
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 114/239 (47%), Gaps = 8/239 (3%)
Query: 21 CSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNALI 78
C + +A ++F P + V+Y +MIT + + G+ EA ++Y+ M R D+ ++L
Sbjct: 439 CLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLF 498
Query: 79 SGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+ + E+ +I +++ DV A S+V+ Y K G + +A IF+++ + +V
Sbjct: 499 NACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIV 558
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W+AM+ G + LF M + G+ N ITL + AC E + GL+
Sbjct: 559 SWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLM 618
Query: 195 SR-FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIE 251
+ FG ++ + GR+G +DEA + M + A W +L+ + IE
Sbjct: 619 EKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIE 677
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 195/571 (34%), Positives = 306/571 (53%), Gaps = 46/571 (8%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN I Y K A F E +V ++ +++ Y K+ + A +FD++P+ ++
Sbjct: 46 SNHFILLYSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDL 105
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V++ +++ Y LF MR G+ + T + + AC Q+H L
Sbjct: 106 VSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIR--QLHSL 163
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK--RDAVSWNSLISGYVHNGEIE 251
GFD + + NS++T Y + G ++EA VF+ M + RD VSWNS+I Y +
Sbjct: 164 AFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGL 223
Query: 252 EAYRLFERMPGK----DFVSWTTMITGFSS----KGNLE--------------------- 282
+A L+ M + D + +++T FS G L+
Sbjct: 224 KALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLI 283
Query: 283 -----------KSIELFNMMPEKDDVTWTAIISGFVNNEQYE-EAFRWFIEMLRKDVRPN 330
+S ++F + D V W +ISG+ N++ EA F +M R P+
Sbjct: 284 DMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPD 343
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRIF 389
+ +SA + ++ +QG Q HA +K + S+ +S+ N+LV++YSKCGN+ DA ++F
Sbjct: 344 DCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLF 403
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ + N V+ NS+I+G+AQ+G+G E+LNLF +M + P IT +S+LSAC H G VE
Sbjct: 404 QRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVE 463
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
EG YF MK ++ IEP EHY+CM+D+LGRAG L+EA LI++M F P W ALLGA
Sbjct: 464 EGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGA 523
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
R + N++LA+ AA ++LEP +A PY++L+ +YS K + R+R + + IRK P
Sbjct: 524 CRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKP 583
Query: 570 GCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
GCSWI L +VH+F+A S +KEI + L
Sbjct: 584 GCSWIELNKRVHVFVAEDNSHPRIKEIHMYL 614
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 174/418 (41%), Gaps = 89/418 (21%)
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
L N I +Y + + A+ F+ + + S+N+LI+ Y I A+ LF+++P D
Sbjct: 45 LSNHFILLYSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPD 104
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVTWTAIISGFVNN----------- 309
VS+ T+I ++ +G+ ++ LF M E D T++ +I+ N+
Sbjct: 105 LVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLA 164
Query: 310 -------------------------EQYEEAFRWFIEMLRKDVRPNQL------------ 332
E+ E F E +R +V N +
Sbjct: 165 FSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLK 224
Query: 333 ------------------TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
TL+SVL+ + L+ G Q HA +K + + + L+
Sbjct: 225 ALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLID 284
Query: 375 LYSKCG-NVVDAYRIFTNIDERNIVSYNSMISGFAQNG-LGEEALNLFRKMKDEGLVPNQ 432
+Y+KCG + ++ ++F I ++V +N+MISG++QN L EAL FR+M+ G P+
Sbjct: 285 MYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDD 344
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA----CMVDILGRAGSLAEAI 488
+F+ +SAC+++ +G K L P + +V + + G+L +A
Sbjct: 345 CSFVCAISACSNLSSPSQG----KQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDAR 400
Query: 489 DLINSM----TFEPPPGVWG-ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
L M T + G A G G LNL LAA + P S T +LS
Sbjct: 401 KLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAAS----IAPTSITLVSILS 454
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 43/167 (25%)
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F W ++ R+ +L + A L G +H +K + S + N + L
Sbjct: 4 FSWTLQSFRQ-----------ILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILL 52
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL----------------------- 412
YSKC + A+ F E N+ S+N++I+ +A+ L
Sbjct: 53 YSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLI 112
Query: 413 ------GE--EALNLFRKMKDEGLVPNQITFLSVLSA-CNHVGLVEE 450
G+ AL+LF +M++ GLV + TF V++A CNHVGL+ +
Sbjct: 113 NAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQ 159
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 124/300 (41%), Gaps = 47/300 (15%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVR-----RGMFYEAEE 59
+N MI+ N EA E F M + S+ I+ +G + A
Sbjct: 311 WNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALA 370
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
+ +P+ + SV +NAL++ Y K G ++A ++F+ M + + V S++ GY + G
Sbjct: 371 MKSEIPSN-QISV-NNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGT 428
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
E+ +F++M ++ A SITL + AC
Sbjct: 429 ESLNLFEQMLAASI-------------------------------APTSITLVSILSACA 457
Query: 180 RFFRYREGVQVHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSW 237
R EG + ++ FG + + + +I + GR G + EA ++ M + +W
Sbjct: 458 HTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAW 517
Query: 238 NSLISGYVHNGEI---EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+L+ G + E+A F ++ + V + + + +S+ E++ + +M ++
Sbjct: 518 AALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDR 577
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 334/661 (50%), Gaps = 73/661 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M RT+ S+N +++A + + E F +P R++VS+ MI G+ G +++A +
Sbjct: 75 MPLRTAFSWNTVLSAYAKRG-DMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRI 133
Query: 61 YVNM------PARW------------------------------RDSV-CSNALISGYLK 83
M P+++ R +V SN+L++ Y K
Sbjct: 134 MGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
G A +F+ MV KD+ +W +M+ + + G++ A F++M E+++V W +M+ GY
Sbjct: 194 CGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGY 253
Query: 144 MKVDCFEDGFDLFLSMRRGGM-AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ D+F M R M + + TL + AC + G Q+H + GFD
Sbjct: 254 NQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDIS 313
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAV--SWNSLISGYVHNGEIEEAYRLFERM 260
I+ N++I+MY R G ++ A ++ +D + +L+ GY+ G++ EA +F+ +
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSL 373
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
+D V+WT MI G+ G Y EA F
Sbjct: 374 KDRDVVAWTAMIVGYEQHG-------------------------------LYGEAINLFR 402
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M+ ++ RPN TL+++LS +++ A+L G QIH VK VS+ N+L+++Y+K G
Sbjct: 403 SMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 381 NVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
++ A R F I ER+ VS+ SMI AQ+G EEAL LF M EGL P+ IT++ V
Sbjct: 463 SITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
SAC H GLV +G YF MK + I P HYACMVD+ GRAG L EA + I M EP
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
WG+LL A R + N+DL K+AA+ L+ LEP+++ Y L++LYS GK + ++R
Sbjct: 583 VVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSL 619
K R++K G SWI +K KVH F EI +T++ I K+ + S+
Sbjct: 643 MKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASV 702
Query: 620 L 620
L
Sbjct: 703 L 703
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 242/506 (47%), Gaps = 74/506 (14%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N L++ Y K G A ++F+ M + +W +++ Y K+G + + E FD++P+++ V
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSV 112
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WT M+ GY + + + M R G+ + TLT + + G +VH +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFI 172
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G ++ + NS++ MY + G A VF M +D SWN++I+ ++ G+++ A
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAM 232
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
FE+M +D V+W +MI+G++ +G +++++F+
Sbjct: 233 AQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFS------------------------- 267
Query: 315 AFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+MLR + P++ TL+SVLSA A L G QIH+H+V + + N+L+
Sbjct: 268 ------KMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALI 321
Query: 374 SLYSKCGNVVDAYR---------------------------------IFTNIDERNIVSY 400
S+YS+CG V A R IF ++ +R++V++
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAW 381
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMK 459
+MI G+ Q+GL EA+NLFR M E PN T ++LS + + + G I+ ++K
Sbjct: 382 TAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVK 441
Query: 460 T--LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
+ +Y++ ++ + +AGS+ A + + E W +++ A H + +
Sbjct: 442 SGEIYSVSVSN----ALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 518 LA-KLAAQHLME-LEPDSATPYVVLS 541
A +L LME L PD T V S
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFS 523
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 158/318 (49%), Gaps = 79/318 (24%)
Query: 169 ITLTILFEAC------------GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
++L+ L E C GRF VH V + G + + L N+++ +Y +
Sbjct: 7 LSLSTLLELCTNLLQKSVNKSNGRF----TAQLVHCRVIKSGLVFSVYLMNNLMNVYSKT 62
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFS 276
G+ A K+F M R A SWN+++S Y G+++ + F+R+P +D VSWTTMI G+
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYK 122
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
+ G QY +A R EM+R+ + P+Q TL++
Sbjct: 123 NIG-------------------------------QYHKAIRIMGEMMREGIEPSQFTLTN 151
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI-------- 388
VL++ AAT L G ++H+ +VK+ + +VS+ NSL+++Y+KCG+ + A +
Sbjct: 152 VLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKD 211
Query: 389 -----------------------FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-K 424
F + ER+IV++NSMISG+ Q G AL++F KM +
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLR 271
Query: 425 DEGLVPNQITFLSVLSAC 442
D L P++ T SVLSAC
Sbjct: 272 DSMLSPDRFTLASVLSAC 289
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 186/546 (34%), Positives = 298/546 (54%), Gaps = 41/546 (7%)
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+VG A I + V ++ ++VD Y K R AR++FD MPE++ V W M+ G
Sbjct: 130 RVGVLLHAHSIVDG-VASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + FED +F+ M G++F+S TL + A YR G+ + L S+ G D
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSD 248
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF----- 257
+ + +I++Y + G + +F + + D +S+N++ISGY N E E A LF
Sbjct: 249 VYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLA 308
Query: 258 --ERMPGKDFVSW--------------------------------TTMITGFSSKGNLEK 283
+R+ V T + T + ++
Sbjct: 309 SGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQF 368
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ +LF+ PEK +W A+ISG+ N + A F EM+ + + PN +T++S+LSA A
Sbjct: 369 ARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQ 427
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
L+ G +H + +ES+V + +LV +Y+KCG++V+A ++F + ++N+V++N+M
Sbjct: 428 LGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAM 487
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I+G+ +G G+EAL LF +M G+ P +TFLS+L AC+H GLV EG F SM Y
Sbjct: 488 ITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG 547
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
+P EHYACMVDILGRAG L A++ I M EP P VWGALLGA H N ++A +A+
Sbjct: 548 FQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVAS 607
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ L +L+P++ YV+LS++YS VR K +++ K+PGC+ I + D+ ++F
Sbjct: 608 KRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVF 667
Query: 584 LAGRKS 589
+G +S
Sbjct: 668 TSGDRS 673
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 219/500 (43%), Gaps = 44/500 (8%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
+ D+ + + + G V R++F+K+ + ++ + ++ G+ + L+
Sbjct: 42 IHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYT 101
Query: 158 SMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
+R+ + ++ T A R R GV +H G ++ +G++I+ +Y +
Sbjct: 102 HLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKF 161
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG-------------- 262
+ A KVF +M +RD V WN++ISG+ N E++ R+F M
Sbjct: 162 TRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVL 221
Query: 263 -------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
D T +I+ +S G K LF+ + + D +
Sbjct: 222 TAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLI 281
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
++ A+ISG+ N + E A F E+L R N TL ++ L I
Sbjct: 282 SYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLS 341
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+K+ + S+ +L ++Y + V A ++F E+++ S+N+MISG+ QNGL + A+
Sbjct: 342 LKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAI 401
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
+LF++M + L PN +T S+LSAC +G + G +K+ +E +VD+
Sbjct: 402 SLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKS-ERLESNVYVSTALVDM 459
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+ GS+ EA L + M + W A++ G G + KL + L P +
Sbjct: 460 YAKCGSIVEARQLFDLMV-DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVT 518
Query: 537 YVVLSDLYSVIGKKRDGNRV 556
++ + S G +GN +
Sbjct: 519 FLSILYACSHSGLVSEGNEI 538
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 166/374 (44%), Gaps = 48/374 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP R+ V + MI+GF R F ++ ++V+M S S L + V
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDM-LDVGLSFDSTTLATVLTAVA 225
Query: 86 RCEE-------AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+E + + DV ++ Y K G+ + R +FD++ + +++++ A
Sbjct: 226 ELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNA 285
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY E LF + G NS TL L F + + L + G
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF- 257
+ ++ T+Y RL + A ++F ++ SWN++ISGY NG + A LF
Sbjct: 346 IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405
Query: 258 --------------------------------------ERMPGKDFVSWTTMITGFSSKG 279
ER+ +VS T ++ ++ G
Sbjct: 406 EMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVS-TALVDMYAKCG 464
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
++ ++ +LF++M +K+ VTW A+I+G+ + +EA + F EML+ + P +T S+L
Sbjct: 465 SIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILY 524
Query: 340 ASAATATLNQGSQI 353
A + + +++G++I
Sbjct: 525 ACSHSGLVSEGNEI 538
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 134/273 (49%), Gaps = 11/273 (4%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR--DSVCSNALISGYLKVGR 86
+F + + +SY AMI+G+ A L+ + A + +S LI YL
Sbjct: 271 LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNH 330
Query: 87 CEEAARIFEAMVEKDVVAWGSMVDG----YCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ + I ++ ++ S+ YC+ V AR++FD+ PEK++ +W AM+ G
Sbjct: 331 LQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISG 390
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
Y + + LF M ++ N +T+T + AC + G VHGL+ + +
Sbjct: 391 YTQNGLTDRAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ + +++ MY + G + EA ++F +M ++ V+WN++I+GY +G +EA +LF M
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509
Query: 263 KDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
V++ +++ S G + + E+F+ M
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSM 542
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
TL+Q QI A ++ + D+S L + G V ++F + + ++ +N +I
Sbjct: 25 TTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLI 84
Query: 405 SGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACNHV 445
GF+ NGL + ++ L+ + K L P+ T+ +SA + +
Sbjct: 85 RGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRL 126
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 277/468 (59%), Gaps = 2/468 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA-FNSITLTILFEACG 179
AR +F P +V ++ G + D ++ F+ MRR A +S + L +A
Sbjct: 58 ARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAA 117
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
+ G+Q+H G D + +G ++++MY GF+ A KVF M + + V+WN+
Sbjct: 118 SYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNA 177
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+++ G+++ A +F RMP ++ SW M+ G++ G LE + +LF MP KDDV+W
Sbjct: 178 VVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSW 237
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+ +I GF +N + EAF +F E+ + +RPN+++L+ LSA A + G +H + K
Sbjct: 238 STMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEK 297
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALN 418
VS+ N+L+ YSKCGNV A +F + E R+IVS+ SMI+G A +G GEEA+
Sbjct: 298 SGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQ 357
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M++ G+ P+ I F+S+L AC+H GL+E+G+ YF MK +YNIEP EHY CMVD+
Sbjct: 358 LFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLY 417
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L +A + I M P +W LLGA H N+ LA+ + L EL+P+++ +V
Sbjct: 418 GRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHV 477
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+LS++Y+V GK +D VR +R+ K+PG S I + ++ F+AG
Sbjct: 478 LLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAG 525
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 178/373 (47%), Gaps = 29/373 (7%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NA+++ + G + A +F M +++ +W M+ GY K G + AR++F +MP K+ V
Sbjct: 176 NAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDV 235
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W+ M+ G+ F + F F +++ GM N ++LT AC G +HG +
Sbjct: 236 SWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFI 295
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM-SKRDAVSWNSLISGYVHNGEIEEA 253
+ GF + + + N+++ Y + G + A VF M KR VSW S+I+G +G EEA
Sbjct: 296 EKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEA 355
Query: 254 YRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIIS 304
+LF M D +++ +++ S G +EK E F M + ++ + ++
Sbjct: 356 IQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVD 415
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM--NM 362
+ Q ++A+ + I M V P + ++L A + + ++ + ++ N
Sbjct: 416 LYGRAGQLDKAYEFIIHM---PVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNN 472
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTN----------IDERNIVSYNSMISGFAQNGL 412
D + +++ ++ K +V R T+ + E + + Y S ++G QN +
Sbjct: 473 SGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMY-SFVAGEVQNSI 531
Query: 413 GEEALNLFRKMKD 425
EEA + K+K+
Sbjct: 532 TEEA---YEKLKE 541
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 119/328 (36%), Gaps = 123/328 (37%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
QVH V + G D D I+ ++ + S +S DA+ +
Sbjct: 23 QVHAYVCKTGLDTDPIIAGKLL--------------LHSAVSVPDALDY----------- 57
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
A RLF P D T+I G + + D ++I+
Sbjct: 58 ----ARRLFLHFPNPDVFMHNTLIRGLA-----------------ESDTPQNSLIT---- 92
Query: 309 NEQYEEAFRWFIEMLRKDVRP-NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
F+EM R+ P + + + +L A+A+ +L G Q+H + +++ +
Sbjct: 93 ----------FVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHLF 142
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDE-------------------------------RN 396
+ +LVS+YS+CG V A ++F + E RN
Sbjct: 143 VGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRN 202
Query: 397 IVSYNSMISGFAQNGLGEEALNL-------------------------------FRKMKD 425
+ S+N M++G+ + G E A L FR+++
Sbjct: 203 LTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQ 262
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFI 453
G+ PN+++ LSAC G +E G I
Sbjct: 263 VGMRPNEVSLTGALSACADAGAIEFGKI 290
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 210/646 (32%), Positives = 338/646 (52%), Gaps = 50/646 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARW 68
NA+++ + ++ +A+ +F M R+ S+ ++ G+ + G F EA LY M A
Sbjct: 136 NALLSMFVRFG-NLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194
Query: 69 RDSVCSNALI----SGYLKVGRCEE-AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
R +V + + +G + R +E A + E DV +++ Y K G + AR
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FDKMP+++ ++W AM+ GY + +G +LF MR + + IT+T + AC
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
R G VHG V + F DI + NS+I MY LG ++EA VFS M +D VSW ++I+
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374
Query: 244 YVHN-----------------------------------GEIEEAYRLFERMPGKDFVSW 268
V + G ++ RL E VS
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSH 434
Query: 269 T----TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF-VNNEQYEEAFRWFIEML 323
++I +S ++ ++E+F + K+ V+WT++I G +NN +E F +
Sbjct: 435 VIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALL--FFRQM 492
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
++ ++PN +TL SVLSA A L +G +IHAH ++ + D + N+++ +Y +CG V
Sbjct: 493 KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKV 552
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A F N ++++ ++N +++G+AQ G + A+ LF KM + + P++ITF+S+L AC+
Sbjct: 553 PALNQF-NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACS 611
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
G+V EG YF MK YN+ P +HYAC+VDILGRAG L +A D I M P +W
Sbjct: 612 KSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIW 671
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
GALL A R H N++L ++AA+ + E + S Y++L +LY+ G ++VR + +
Sbjct: 672 GALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRER 731
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+ PGCSW+ +K KVH FL+G S KEI L KE
Sbjct: 732 GLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKE 777
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 156/306 (50%), Gaps = 39/306 (12%)
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
EG +V+ LVS + LGN++++M+ R G + +A VF MS+RD SWN L+ GY
Sbjct: 115 EGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYA 174
Query: 246 HNGEIEEAYRLFERM--------------------------PGKDFVSWT---------- 269
G +EA L+ RM GK+ +
Sbjct: 175 KAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVD 234
Query: 270 ---TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+IT + G++ + LF+ MP++D ++W A+ISG+ N E F M
Sbjct: 235 VGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELS 294
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
V P+ +T+++V SA G +H +VVK D+S+ NSL+ +YS G + +A
Sbjct: 295 VDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAE 354
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+F+ ++ +++VS+ +MI+ + L +A+ ++ M+ EG++P++IT +SVLSAC +G
Sbjct: 355 TVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIG 414
Query: 447 LVEEGF 452
++ G
Sbjct: 415 HLDLGI 420
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 74/139 (53%)
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
E+A + ML + + ++L ++GS+++ V V + N+L
Sbjct: 79 EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNAL 138
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+S++ + GN++DA+ +F + ER++ S+N ++ G+A+ G +EALNL+ +M + PN
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV 198
Query: 433 ITFLSVLSACNHVGLVEEG 451
TF SVL C V + G
Sbjct: 199 YTFPSVLKTCAGVSDIARG 217
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 186/546 (34%), Positives = 298/546 (54%), Gaps = 41/546 (7%)
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+VG A I + V ++ ++VD Y K R AR++FD MPE++ V W M+ G
Sbjct: 130 RVGVLLHAHSIVDG-VASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + FED +F+ M G++F+S TL + A YR G+ + L S+ G D
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSD 248
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF----- 257
+ + +I++Y + G + +F + + D +S+N++ISGY N E E A LF
Sbjct: 249 VYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLA 308
Query: 258 --ERMPGKDFVSW--------------------------------TTMITGFSSKGNLEK 283
+R+ V T + T + ++
Sbjct: 309 SGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQF 368
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ +LF+ PEK +W A+ISG+ N + A F EM+ + + PN +T++S+LSA A
Sbjct: 369 ARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQ 427
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
L+ G +H + +ES+V + +LV +Y+KCG++V+A ++F + ++N+V++N+M
Sbjct: 428 LGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAM 487
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I+G+ +G G+EAL LF +M G+ P +TFLS+L AC+H GLV EG F SM Y
Sbjct: 488 ITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG 547
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
+P EHYACMVDILGRAG L A++ I M EP P VWGALLGA H N ++A +A+
Sbjct: 548 FQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVAS 607
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ L +L+P++ YV+LS++YS VR K +++ K+PGC+ I + D+ ++F
Sbjct: 608 KRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVF 667
Query: 584 LAGRKS 589
+G +S
Sbjct: 668 TSGDRS 673
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 219/500 (43%), Gaps = 44/500 (8%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
+ D+ + + + G V R++F+K+ + ++ + ++ G+ + L+
Sbjct: 42 IHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYT 101
Query: 158 SMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
+R+ + ++ T A R R GV +H G ++ +G++I+ +Y +
Sbjct: 102 HLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKF 161
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG-------------- 262
+ A KVF +M +RD V WN++ISG+ N E++ R+F M
Sbjct: 162 TRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVL 221
Query: 263 -------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
D T +I+ +S G K LF+ + + D +
Sbjct: 222 TAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLI 281
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
++ A+ISG+ N + E A F E+L R N TL ++ L I
Sbjct: 282 SYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLS 341
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+K+ + S+ +L ++Y + V A ++F E+++ S+N+MISG+ QNGL + A+
Sbjct: 342 LKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAI 401
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
+LF++M + L PN +T S+LSAC +G + G +K+ +E +VD+
Sbjct: 402 SLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKS-ERLESNVYVSTALVDM 459
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+ GS+ EA L + M + W A++ G G + KL + L P +
Sbjct: 460 YAKCGSIVEARQLFDLMV-DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVT 518
Query: 537 YVVLSDLYSVIGKKRDGNRV 556
++ + S G +GN +
Sbjct: 519 FLSILYACSHSGLVSEGNEI 538
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 166/374 (44%), Gaps = 48/374 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP R+ V + MI+GF R F ++ ++V+M S S L + V
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDM-LDVGLSFDSTTLATVLTAVA 225
Query: 86 RCEE-------AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+E + + DV ++ Y K G+ + R +FD++ + +++++ A
Sbjct: 226 ELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNA 285
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY E LF + G NS TL L F + + L + G
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF- 257
+ ++ T+Y RL + A ++F ++ SWN++ISGY NG + A LF
Sbjct: 346 IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405
Query: 258 --------------------------------------ERMPGKDFVSWTTMITGFSSKG 279
ER+ +VS T ++ ++ G
Sbjct: 406 EMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVS-TALVDMYAKCG 464
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
++ ++ +LF++M +K+ VTW A+I+G+ + +EA + F EML+ + P +T S+L
Sbjct: 465 SIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILY 524
Query: 340 ASAATATLNQGSQI 353
A + + +++G++I
Sbjct: 525 ACSHSGLVSEGNEI 538
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 134/273 (49%), Gaps = 11/273 (4%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR--DSVCSNALISGYLKVGR 86
+F + + +SY AMI+G+ A L+ + A + +S LI YL
Sbjct: 271 LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNH 330
Query: 87 CEEAARIFEAMVEKDVVAWGSMVDG----YCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ + I ++ ++ S+ YC+ V AR++FD+ PEK++ +W AM+ G
Sbjct: 331 LQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISG 390
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
Y + + LF M ++ N +T+T + AC + G VHGL+ + +
Sbjct: 391 YTQNGLTDRAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESN 449
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ + +++ MY + G + EA ++F +M ++ V+WN++I+GY +G +EA +LF M
Sbjct: 450 VYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQ 509
Query: 263 KDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
V++ +++ S G + + E+F+ M
Sbjct: 510 SGIPPTGVTFLSILYACSHSGLVSEGNEIFHSM 542
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
TL+Q QI A ++ + D+S L + G V ++F + + ++ +N +I
Sbjct: 25 TTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLI 84
Query: 405 SGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACNHV 445
GF+ NGL + ++ L+ + K L P+ T+ +SA + +
Sbjct: 85 RGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRL 126
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 210/646 (32%), Positives = 338/646 (52%), Gaps = 50/646 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARW 68
NA+++ + ++ +A+ +F M R+ S+ ++ G+ + G F EA LY M A
Sbjct: 136 NALLSMFVRFG-NLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194
Query: 69 RDSVCSNALI----SGYLKVGRCEE-AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
R +V + + +G + R +E A + E DV +++ Y K G + AR
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FDKMP+++ ++W AM+ GY + +G +LF MR + + IT+T + AC
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
R G VHG V + F DI + NS+I MY LG ++EA VFS M +D VSW ++I+
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374
Query: 244 YVHN-----------------------------------GEIEEAYRLFERMPGKDFVSW 268
V + G ++ RL E VS
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSH 434
Query: 269 T----TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF-VNNEQYEEAFRWFIEML 323
++I +S ++ ++E+F + K+ V+WT++I G +NN +E F +
Sbjct: 435 VIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALL--FFRQM 492
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
++ ++PN +TL SVLSA A L +G +IHAH ++ + D + N+++ +Y +CG V
Sbjct: 493 KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKV 552
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A F N ++++ ++N +++G+AQ G + A+ LF KM + + P++ITF+S+L AC+
Sbjct: 553 PALNQF-NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACS 611
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
G+V EG YF MK YN+ P +HYAC+VDILGRAG L +A D I M P +W
Sbjct: 612 KSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIW 671
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
GALL A R H N++L ++AA+ + E + S Y++L +LY+ G ++VR + +
Sbjct: 672 GALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRER 731
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+ PGCSW+ +K KVH FL+G S KEI L KE
Sbjct: 732 GLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKE 777
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 156/306 (50%), Gaps = 39/306 (12%)
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
EG +V+ LVS + LGN++++M+ R G + +A VF MS+RD SWN L+ GY
Sbjct: 115 EGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYA 174
Query: 246 HNGEIEEAYRLFERM--------------------------PGKDFVSWT---------- 269
G +EA L+ RM GK+ +
Sbjct: 175 KAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVD 234
Query: 270 ---TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+IT + G++ + LF+ MP++D ++W A+ISG+ N E F M
Sbjct: 235 VGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELS 294
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
V P+ +T+++V SA G +H +VVK D+S+ NSL+ +YS G + +A
Sbjct: 295 VDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAE 354
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+F+ ++ +++VS+ +MI+ + L +A+ ++ M+ EG++P++IT +SVLSAC +G
Sbjct: 355 TVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIG 414
Query: 447 LVEEGF 452
++ G
Sbjct: 415 HLDLGI 420
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 74/139 (53%)
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
E+A + ML + + ++L ++GS+++ V V + N+L
Sbjct: 79 EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNAL 138
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+S++ + GN++DA+ +F + ER++ S+N ++ G+A+ G +EALNL+ +M + PN
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV 198
Query: 433 ITFLSVLSACNHVGLVEEG 451
TF SVL C V + G
Sbjct: 199 YTFPSVLKTCAGVSDIARG 217
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 208/661 (31%), Positives = 336/661 (50%), Gaps = 50/661 (7%)
Query: 14 TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
T LI+ C SI EA +F + + V Y M+ G+ + +A Y M
Sbjct: 80 TKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVM 139
Query: 71 SVCSN----ALISGY---LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
V + +SG L+ GR E + + ++ A ++V+ Y K ++ +A +
Sbjct: 140 PVVYDFTYLLQLSGENLDLRRGR-EIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYK 198
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F++MP++++V+W +V GY + + L M+ G +SITL + A
Sbjct: 199 MFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKA 258
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
R G +HG R GF+Y + + +++ Y + G + A VF MS R+ VSWN++I G
Sbjct: 259 LRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDG 318
Query: 244 YVHNGEIEEAYRLF---------------------------------------ERMPGKD 264
Y NGE EEA+ F E+ G D
Sbjct: 319 YAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFD 378
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
++I+ +S ++ + +F + K VTW A+I G+ N EA F EM
Sbjct: 379 VSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQS 438
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
D++P+ TL SV++A A + Q IH ++ M+ +V + +L+ ++KCG +
Sbjct: 439 HDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQT 498
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A ++F + ER+++++N+MI G+ NG G EAL+LF +M++ + PN+ITFLSV++AC+H
Sbjct: 499 ARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSH 558
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
GLVEEG YF+SMK Y +EP +HY MVD+LGRAG L +A I M +P V G
Sbjct: 559 SGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLG 618
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
A+LGA R H N++L + A L +L+PD +V+L+++Y+ RVR + K
Sbjct: 619 AMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKG 678
Query: 565 IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLER 624
I+K+PGCS + L+++VH F +G + K I L+T+ K + S+ +E
Sbjct: 679 IQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSIHDVEE 738
Query: 625 D 625
D
Sbjct: 739 D 739
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 151/318 (47%), Gaps = 42/318 (13%)
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
IL E C +E Q+ L+ + GF + + +I+++ + + EA +VF + +
Sbjct: 49 ILLELCTSL---KELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHK 105
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------------- 261
V +++++ GY N + +A R +ERM
Sbjct: 106 LDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIH 165
Query: 262 --------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+ + T ++ ++ +E + ++F MP++D V+W +++G+ N
Sbjct: 166 GMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFAR 225
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A + ++M +P+ +TL SVL A A L G IH + + E V++ +++
Sbjct: 226 RAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAML 285
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
Y KCG+V A +F + RN+VS+N+MI G+AQNG EEA F KM DEG+ P +
Sbjct: 286 DTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNV 345
Query: 434 TFLSVLSACNHVGLVEEG 451
+ + L AC ++G +E G
Sbjct: 346 SMMGALHACANLGDLERG 363
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 202/572 (35%), Positives = 316/572 (55%), Gaps = 48/572 (8%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPAR----WRDSVCSNALISGYLKVGRCEEAARIFEAMV 98
A++ + + G A L+ M R W N++ISG K G EA +F M
Sbjct: 135 AILDMYAKNGQVDLARNLFEQMAERTLADW------NSMISGCWKSGNETEAVVLFNMMP 188
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
++++ W SMV GY K G + AR FD+MPE++VV+W AM Y + +C ++ +LF
Sbjct: 189 ARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQ 248
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M G+ + T + +C S G D L +SI+ M
Sbjct: 249 MLEEGITPDDTTWVVTISSC----------------SSIG---DPTLADSILRM------ 283
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG-KDFVSWTTMITGFSS 277
+D+ + V + K +L+ + G +E A +F+ + ++ V+W MI+ ++
Sbjct: 284 IDQKHIVLNSFVK------TALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTR 337
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSS 336
G L + ELF+ MP++D V+W ++I+G+ N + + F EM+ D++P+++T++S
Sbjct: 338 VGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIAS 397
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
VLSA L + V + N++ +S NSL+ +YSKCG+V DA+RIF + R+
Sbjct: 398 VLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRD 457
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+VS+N++ISGFA NG G+EA+ L M++EG+ P+ +T++ VL+AC+H GL+ EG FK
Sbjct: 458 VVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFK 517
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
S++ P +HYACMVD+LGRAG L EA LI SM +P GV+G+LL A R H +
Sbjct: 518 SIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRV 572
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
L +LAA L ELEP + YV+LS++Y+ G+ D RVR K ++KS G SW+
Sbjct: 573 GLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEY 632
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K +VH F G +S K+I L + + K
Sbjct: 633 KGQVHKFTVGDRSHEQSKDIYKLLAELERKMK 664
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 198/404 (49%), Gaps = 39/404 (9%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
IF P + ++ M+ Y ++ LF + L + G+
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGK--- 112
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G H V + G D + N+I+ MY + G +D A +F M++R WNS+ISG
Sbjct: 113 --SGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
+G EA LF MP ++ ++WT+M+TG++ G+LE + F+ MPE+ V+W A+
Sbjct: 171 CWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQ 230
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQ----LTLSS----------------------V 337
S + E +EA F +ML + + P+ +T+SS V
Sbjct: 231 SAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIV 290
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQ------NSLVSLYSKCGNVVDAYRIFTN 391
L++ TA L+ ++ + N+ ++ Q N ++S Y++ G + A +F N
Sbjct: 291 LNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDN 350
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD-EGLVPNQITFLSVLSACNHVGLVEE 450
+ +R++VS+NSMI+G+AQNG ++ LF++M + P+++T SVLSAC H+G ++
Sbjct: 351 MPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKL 410
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ ++ NI+ G + ++ + + GS+A+A + +M
Sbjct: 411 SYWVLDIVRE-KNIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 161/372 (43%), Gaps = 49/372 (13%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F M R + +MI+G + G EA L+ MPA R+ + ++++GY K+G
Sbjct: 149 ARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPA--RNIITWTSMVTGYAKMG 206
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV----VAWTAMVD 141
E A R F+ M E+ VV+W +M Y +K EA +F +M E+ + W +
Sbjct: 207 DLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTIS 266
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
+ + + + + NS T L + +F + G
Sbjct: 267 SCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIA---RNIFDELGSQR 323
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+ + N +I+ Y R+G + A ++F M KRD VSWNS+I+GY NGE + LF+ M
Sbjct: 324 NAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMI 383
Query: 262 G-----KDFVSWTTMITGFSSKGNL-----------EKSIEL------------------ 287
D V+ ++++ G L EK+I+L
Sbjct: 384 SCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSV 443
Query: 288 ------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
F M +D V++ +ISGF N +EA + + M + + P+ +T VL+A
Sbjct: 444 ADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTAC 503
Query: 342 AATATLNQGSQI 353
+ LN+G +
Sbjct: 504 SHAGLLNEGKNV 515
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 178/418 (42%), Gaps = 84/418 (20%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
MA+RT A +N+MI+ + EA +F MP RN +++ +M+TG+ + G A
Sbjct: 156 MAERTLADWNSMISGCWKSGNET-EAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRY 214
Query: 61 YVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAMVEK----DVVAW---------- 105
+ MP R SV S NA+ S Y + +EA +F M+E+ D W
Sbjct: 215 FDEMPER---SVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSI 271
Query: 106 -------------------------GSMVDGYCKKGRVIEAREIFDKM-PEKNVVAWTAM 139
+++D + K G + AR IFD++ ++N V W M
Sbjct: 272 GDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIM 331
Query: 140 VDGYMKVDCFEDGFDLFLSM-RRGGMAFNS------------------------------ 168
+ Y +V +LF +M +R +++NS
Sbjct: 332 ISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPD 391
Query: 169 -ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+T+ + ACG + V +V I NS+I MY + G + +A+++F
Sbjct: 392 EVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQ 451
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEK 283
M RD VS+N+LISG+ NG +EA +L M + D V++ ++T S G L +
Sbjct: 452 TMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNE 511
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+F + + ++ + +EA + I+ + ++P+ S+L+AS
Sbjct: 512 GKNVFKSIQAPTVDHYACMVDLLGRAGELDEA-KMLIQSM--PMKPHAGVYGSLLNAS 566
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 202/636 (31%), Positives = 345/636 (54%), Gaps = 51/636 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNALISG--- 80
A ++F T+ +N V + AM+ G+V+ G E EL+ NM + + D ++++S
Sbjct: 381 AKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACAC 440
Query: 81 --YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
YL +G + + I + ++ ++VD Y K G + +AR+ F+ + ++ V+W
Sbjct: 441 LKYLDLGH-QLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNV 499
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ GY++ + + F LF M G+ + ++L + AC +G QVH L + G
Sbjct: 500 IIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTG 559
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ + G+S+I MY + G +D A+K+ + M +R VS N+LI+GY +E+A LF
Sbjct: 560 QETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQI-NLEQAVNLFR 618
Query: 259 RMPGKDF----VSWTTMITGF--SSKGNLEKSIE--LFNMMPEKDD-------------- 296
M + +++ +++ K NL + I + M + DD
Sbjct: 619 DMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNS 678
Query: 297 -------------------VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
V WTA+ISG N+ A + + EM +V P+Q T S
Sbjct: 679 LRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSA 738
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERN 396
L A A +++ G++ H+ + +SD ++LV +Y+KCG+V + ++F + +++
Sbjct: 739 LRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKD 798
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
++S+NSMI GFA+NG E+AL +F +MK + P+ +TFL VL+AC+H G V EG + F
Sbjct: 799 VISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFD 858
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
M LY ++P +H ACMVD+LGR GSL EA + IN + FEP VW +LGA R H +
Sbjct: 859 MMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDD 918
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+ AA+ L+ELEP +++PYV+LS++Y+ G + N +R + + K ++K PGCSWI++
Sbjct: 919 IRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVV 978
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+ ++F+AG KS EI+ L+ ++ +E D+
Sbjct: 979 GQETNMFVAGDKSHHSASEIDAILKDLTPLMRENDY 1014
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 223/417 (53%), Gaps = 44/417 (10%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCKKGRVIEAREIF 125
D V ++I GY+KVG EEA ++F+ M E D VA+ ++++ Y GR+ A ++F
Sbjct: 225 DKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLF 284
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+MP +NVVAW M+ G+ K + + F +MR+ G+ TL + A
Sbjct: 285 SRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALD 344
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G+ VH + G ++ +G+S+++MY + G M+ A KVF +++++ V WN+++ GYV
Sbjct: 345 FGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYV 404
Query: 246 HNGEIEEAYRLFERMPGKDF----VSWTTMITG--------------------------- 274
NG E LF M F +++++++
Sbjct: 405 QNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLF 464
Query: 275 --------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
++ G LE + + F ++ +D+V+W II G+V E EAF F M
Sbjct: 465 VGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLG 524
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+ P++++L+S+LSA A+ L QG Q+H VK E+ + +SL+ +Y+KCG + A+
Sbjct: 525 ILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAH 584
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+I + ER++VS N++I+G+AQ L E+A+NLFR M EG+ +ITF S+L AC+
Sbjct: 585 KILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACH 640
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 203/387 (52%), Gaps = 11/387 (2%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+VD Y K V A F ++ +K+++AW +++ + K F + G+ N
Sbjct: 100 IVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPN 159
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T I+ +C R + G QVH V + GF+ ++I MY + F+ +A +F
Sbjct: 160 EFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFD 219
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEK 283
+ D VSW S+I GY+ G EEA ++F+ M D V++ T+I + G L+
Sbjct: 220 GAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDN 279
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ +LF+ MP ++ V W +ISG EA +F M + ++ + TL SVLSA A+
Sbjct: 280 ASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIAS 339
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
A L+ G +HA +K + S+V + +SLVS+Y+KCG + A ++F ++E+N+V +N+M
Sbjct: 340 LAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAM 399
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM---KT 460
+ G+ QNG E + LF MK G P+ T+ S+LSAC + ++ G + K
Sbjct: 400 LGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKF 459
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEA 487
N+ G +VD+ ++G+L +A
Sbjct: 460 ASNLFVGN----ALVDMYAKSGALEDA 482
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 254/532 (47%), Gaps = 55/532 (10%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F+ MP RN V++ MI+G + G EA E + NM + + S G +
Sbjct: 280 ASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMR---KAGIKSTRSTLGSVLSA 336
Query: 86 RCEEAARIFEAMVEKDVVAWG---------SMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
AA F +V + + G S+V Y K G++ A+++FD + E+NVV W
Sbjct: 337 IASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLW 396
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
AM+ GY++ + +LF +M+ G + T + + AC G Q+H ++ +
Sbjct: 397 NAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIK 456
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
F ++ +GN+++ MY + G +++A + F ++ RD VSWN +I GYV + EA+ L
Sbjct: 457 NKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHL 516
Query: 257 FERM--------------------------PGKD-------------FVSWTTMITGFSS 277
F RM GK S +++I ++
Sbjct: 517 FRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAK 576
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
G ++ + ++ MPE+ V+ A+I+G+ E+A F +ML + + ++T +S+
Sbjct: 577 CGAIDSAHKILACMPERSVVSMNALIAGYA-QINLEQAVNLFRDMLVEGINSTEITFASL 635
Query: 338 LSASAATATLNQGSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNI-DER 395
L A LN G QIH+ ++KM ++ D + SL+ +Y DA +F+ + +
Sbjct: 636 LDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPK 695
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ V + +MISG +QN AL L+++M+ ++P+Q TF+S L AC V +++G
Sbjct: 696 SAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDG-TET 754
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
S+ + + +VD+ + G + ++ + M+ + W +++
Sbjct: 755 HSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMI 806
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 207/454 (45%), Gaps = 79/454 (17%)
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
G+++ Y K + +AR IFD E + V+WT+M+ GY+KV E+ +F M + G
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQE 258
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ + ++I Y LG +D A+ +
Sbjct: 259 PDQVAFV-----------------------------------TVINAYVDLGRLDNASDL 283
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSW----------------- 268
FS M R+ V+WN +ISG+ G EA F+ M S
Sbjct: 284 FSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAAL 343
Query: 269 ----------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+++++ ++ G +E + ++F+ + E++ V W A++ G+
Sbjct: 344 DFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGY 403
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
V N E F M P+ T SS+LSA A L+ G Q+H+ ++K S++
Sbjct: 404 VQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNL 463
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ N+LV +Y+K G + DA + F I R+ VS+N +I G+ Q EA +LFR+M
Sbjct: 464 FVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLL 523
Query: 427 GLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
G++P++++ S+LSAC V +E+G ++ S+KT E + ++D+ + G++
Sbjct: 524 GILPDEVSLASILSACASVRGLEQGKQVHCLSVKT--GQETKLYSGSSLIDMYAKCGAID 581
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
A ++ M E AL+ AG +NL+ A
Sbjct: 582 SAHKILACMP-ERSVVSMNALI-AGYAQINLEQA 613
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 150/343 (43%), Gaps = 46/343 (13%)
Query: 215 RLGFMDEANKVFSMMSKR-----DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
RL NK+ S + V N ++ Y +++ A R F+++ KD ++W
Sbjct: 70 RLSQFSTTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWN 129
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
++++ S +G ++ F ++ W + V P
Sbjct: 130 SILSMHSKQGFPHLVVKYFGLL-------WNS------------------------GVWP 158
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N+ T + VLS+ A + G Q+H +VVKM ES + +L+ +Y+KC + DA IF
Sbjct: 159 NEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIF 218
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
E + VS+ SMI G+ + GL EEA+ +F++M+ G P+Q+ F++V++A +G ++
Sbjct: 219 DGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLD 278
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT---FEPPPGVWGAL 506
F M + + M+ + G EAI+ +M + G++
Sbjct: 279 NASDLFSRMPNRNVVA-----WNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSV 333
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
L A + LD L H L+ + V S L S+ K
Sbjct: 334 LSAIASLAALDFGLLV--HAEALKQGLHSNVYVGSSLVSMYAK 374
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 148/362 (40%), Gaps = 82/362 (22%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + GF +LGN I+ +Y + +D A + F + +D ++WNS++S + G
Sbjct: 81 IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140
Query: 250 IEEAYRLF-------------------------ERMPGKDFVSWTTMITGFSSKGNLEKS 284
+ F E + V + GF S E +
Sbjct: 141 PHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGA 200
Query: 285 I--------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+ +F+ E D V+WT++I G++ EEA + F EM + P+
Sbjct: 201 LIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPD 260
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
Q+ +V++A Y G + +A +F+
Sbjct: 261 QVAFVTVINA-----------------------------------YVDLGRLDNASDLFS 285
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ RN+V++N MISG A+ G G EA+ F+ M+ G+ + T SVLSA + ++
Sbjct: 286 RMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDF 345
Query: 451 G-FIYFKSMKT--LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
G ++ +++K N+ G + +V + + G + A + +++ E +W A+L
Sbjct: 346 GLLVHAEALKQGLHSNVYVG----SSLVSMYAKCGKMEAAKKVFDTLN-EQNVVLWNAML 400
Query: 508 GA 509
G
Sbjct: 401 GG 402
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 128/305 (41%), Gaps = 48/305 (15%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFY-------E 56
+++ + AMI+ L N+CS+ A +++ M N + A +R E
Sbjct: 695 KSAVVWTAMISGLSQNDCSVV-ALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTE 753
Query: 57 AEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMV-EKDVVAWGSMVDGYCKK 115
L + D + S+AL+ Y K G + + ++F+ M +KDV++W SM+ G+ K
Sbjct: 754 THSLIFHTGFD-SDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKN 812
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G +A +FD+M + +V + +T +
Sbjct: 813 GYAEDALRVFDEMKQSHVTP-------------------------------DDVTFLGVL 841
Query: 176 EACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRD 233
AC R EG + +V+ +G ++ + GR G + EA + + ++ + D
Sbjct: 842 TACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPD 901
Query: 234 AVSWNSLISG-YVHNGEI---EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
A W +++ +H +I + A +L E P ++ + + +++ GN ++ L
Sbjct: 902 AKVWATMLGACRIHGDDIRGQQAAEKLIELEP-QNSSPYVLLSNIYAASGNWDEVNTLRR 960
Query: 290 MMPEK 294
M EK
Sbjct: 961 EMREK 965
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 202/572 (35%), Positives = 316/572 (55%), Gaps = 48/572 (8%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPAR----WRDSVCSNALISGYLKVGRCEEAARIFEAMV 98
A++ + + G A L+ M R W N++ISG K G EA +F M
Sbjct: 135 AILDMYAKNGQVDLARNLFEQMAERTLADW------NSMISGCWKSGNETEAVVLFNMMP 188
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
++++ W SMV GY K G + AR FD+MPE++VV+W AM Y + +C ++ +LF
Sbjct: 189 ARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQ 248
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M G+ + T + +C S G D L +SI+ M
Sbjct: 249 MLEEGITPDDTTWVVTISSC----------------SSIG---DPTLADSILRM------ 283
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG-KDFVSWTTMITGFSS 277
+D+ + V + K +L+ + G +E A +F+ + ++ V+W MI+ ++
Sbjct: 284 IDQKHIVLNSFVK------TALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTR 337
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSS 336
G L + ELF+ MP++D V+W ++I+G+ N + + F EM+ D++P+++T++S
Sbjct: 338 VGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIAS 397
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
VLSA L + V + N++ +S NSL+ +YSKCG+V DA+RIF + R+
Sbjct: 398 VLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRD 457
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+VS+N++ISGFA NG G+EA+ L M++EG+ P+ +T++ VL+AC+H GL+ EG FK
Sbjct: 458 VVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFK 517
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
S++ P +HYACMVD+LGRAG L EA LI SM +P GV+G+LL A R H +
Sbjct: 518 SIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRV 572
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
L +LAA L ELEP + YV+LS++Y+ G+ D RVR K ++KS G SW+
Sbjct: 573 GLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEY 632
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K +VH F G +S K+I L + + K
Sbjct: 633 KGQVHKFTVGDRSHEQSKDIYKLLAELERKMK 664
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 198/404 (49%), Gaps = 39/404 (9%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
IF P + ++ M+ Y ++ LF + L + G+
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGK--- 112
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G H V + G D + N+I+ MY + G +D A +F M++R WNS+ISG
Sbjct: 113 --SGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
+G EA LF MP ++ ++WT+M+TG++ G+LE + F+ MPE+ V+W A+
Sbjct: 171 CWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQ 230
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQ----LTLSS----------------------V 337
S + E +EA F +ML + + P+ +T+SS V
Sbjct: 231 SAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIV 290
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQ------NSLVSLYSKCGNVVDAYRIFTN 391
L++ TA L+ ++ + N+ ++ Q N ++S Y++ G + A +F N
Sbjct: 291 LNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDN 350
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD-EGLVPNQITFLSVLSACNHVGLVEE 450
+ +R++VS+NSMI+G+AQNG ++ LF++M + P+++T SVLSAC H+G ++
Sbjct: 351 MPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKL 410
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ ++ NI+ G + ++ + + GS+A+A + +M
Sbjct: 411 SYWVLDIVRE-KNIKLGISGFNSLIFMYSKCGSVADAHRIFQTM 453
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 161/372 (43%), Gaps = 49/372 (13%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F M R + +MI+G + G EA L+ MPA R+ + ++++GY K+G
Sbjct: 149 ARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPA--RNIITWTSMVTGYAKMG 206
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV----VAWTAMVD 141
E A R F+ M E+ VV+W +M Y +K EA +F +M E+ + W +
Sbjct: 207 DLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTIS 266
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
+ + + + + NS T L + +F + G
Sbjct: 267 SCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIA---RNIFDELGSQR 323
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+ + N +I+ Y R+G + A ++F M KRD VSWNS+I+GY NGE + LF+ M
Sbjct: 324 NAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMI 383
Query: 262 G-----KDFVSWTTMITGFSSKGNL-----------EKSIEL------------------ 287
D V+ ++++ G L EK+I+L
Sbjct: 384 SCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSV 443
Query: 288 ------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
F M +D V++ +ISGF N +EA + + M + + P+ +T VL+A
Sbjct: 444 ADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTAC 503
Query: 342 AATATLNQGSQI 353
+ LN+G +
Sbjct: 504 SHAGLLNEGKNV 515
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 178/418 (42%), Gaps = 84/418 (20%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
MA+RT A +N+MI+ + EA +F MP RN +++ +M+TG+ + G A
Sbjct: 156 MAERTLADWNSMISGCWKSGNET-EAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRY 214
Query: 61 YVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAMVEK----DVVAW---------- 105
+ MP R SV S NA+ S Y + +EA +F M+E+ D W
Sbjct: 215 FDEMPER---SVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSI 271
Query: 106 -------------------------GSMVDGYCKKGRVIEAREIFDKM-PEKNVVAWTAM 139
+++D + K G + AR IFD++ ++N V W M
Sbjct: 272 GDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIM 331
Query: 140 VDGYMKVDCFEDGFDLFLSM-RRGGMAFNS------------------------------ 168
+ Y +V +LF +M +R +++NS
Sbjct: 332 ISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPD 391
Query: 169 -ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+T+ + ACG + V +V I NS+I MY + G + +A+++F
Sbjct: 392 EVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQ 451
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEK 283
M RD VS+N+LISG+ NG +EA +L M + D V++ ++T S G L +
Sbjct: 452 TMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNE 511
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+F + + ++ + +EA + I+ + ++P+ S+L+AS
Sbjct: 512 GKNVFKSIQAPTVDHYACMVDLLGRAGELDEA-KMLIQSM--PMKPHAGVYGSLLNAS 566
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 191/604 (31%), Positives = 343/604 (56%), Gaps = 49/604 (8%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALIS-GY 81
+F M RN VS+ +++ G+ G++ EL+ M P R+ S AL++ G
Sbjct: 150 VFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGV 209
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+ +G + A + + E+ + + S++ Y + G + +AR++FDKM ++ V W +M+
Sbjct: 210 VGIG-LQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIA 268
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG--RFFRYREGVQVHGLVSRFGF 199
GY++ + F++F M+ G+ +T + ++C R + +Q L S GF
Sbjct: 269 GYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKS--GF 326
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDAVSWNSLISGYVHNGEIEEAYRLFE 258
D I+ +++ + MD+A +FS+M + ++ VSW ++ISG + NG ++A LF
Sbjct: 327 TTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFS 386
Query: 259 RMPGKD------------------FVS-----------------WTTMITGFSSKGNLEK 283
+M + FVS T ++ + GN
Sbjct: 387 QMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTID 446
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
++++F ++ KD + W+A+++G+ + EEA + F +++++ ++PN+ T SSV++A A+
Sbjct: 447 AVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACAS 506
Query: 344 -TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
TA QG Q HA+ +KM + + + + ++LV++Y+K GN+ A+ +F ER++VS+NS
Sbjct: 507 PTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNS 566
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
MISG++Q+G ++AL +F +M+ + + +TF+ V++AC H GLVE+G YF SM +
Sbjct: 567 MISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDH 626
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
+I P +HY+CM+D+ RAG L +A+ +IN M F P VW LLGA R H N++L +LA
Sbjct: 627 HINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELA 686
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
A+ L+ L+P+ + YV+LS++Y+ G ++ VR ++++K PG SWI +K+K +
Sbjct: 687 AEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYS 746
Query: 583 FLAG 586
FLAG
Sbjct: 747 FLAG 750
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 240/472 (50%), Gaps = 56/472 (11%)
Query: 21 CSIYEAFEIFATMPMRNAV--SYAAMITGFVRRGMFYEAEELYVNM------PARWRDSV 72
C + A +F +P R + ++ + R EA L+V++ P S
Sbjct: 39 CVPHIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLS- 97
Query: 73 CSNALISGYL--KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
C + +G L K+GR + +V+ V S+VD Y K V + R +FD+M E
Sbjct: 98 CVFNICAGSLDGKLGRQVHCQCVKFGLVDH-VSVGTSLVDMYMKTENVNDGRRVFDEMGE 156
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
+NVV+WT+++ GY + ++LF M+ G+ N T++ + A G+QV
Sbjct: 157 RNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQV 216
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H +V + GF+ I + NS+I++Y RLG + +A VF M RD V+WNS+I+GYV NG+
Sbjct: 217 HAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQD 276
Query: 251 EEAYRLFERMP---------------------------------------GKDFVSWTTM 271
E + +F +M D + T +
Sbjct: 277 LEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITAL 336
Query: 272 ITGFSSKGNLEKSIELFNMMPE-KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+ S ++ ++ LF++M E K+ V+WTA+ISG + N ++A F +M R+ V+PN
Sbjct: 337 MVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPN 396
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T S++L+ S++HA V+K N E S+ +L+ Y K GN +DA ++F
Sbjct: 397 HFTYSAILTVHYPVFV----SEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFE 452
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
I+ ++++++++M++G+AQ G EEA LF ++ EG+ PN+ TF SV++AC
Sbjct: 453 IIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINAC 504
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 227/479 (47%), Gaps = 50/479 (10%)
Query: 121 AREIFDKMPEK--NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
A +FDK+P + + ++ Y + ++ +LF+S+ + + TL+ +F C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ G QVH +FG + +G S++ MY + +++ +VF M +R+ VSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 239 SLISGYVHNGEIEEAYRLFERM------PGKDFVS------------------------- 267
SL++GY NG + LF +M P + VS
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223
Query: 268 --------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
+ ++I+ +S G L + ++F+ M +D VTW ++I+G+V N Q E F F
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+M V+P +T +SV+ + A+ L + +K +D + +L+ SKC
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKC 343
Query: 380 GNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
+ DA +F+ ++E +N+VS+ +MISG QNG ++A+NLF +M+ EG+ PN T+ ++
Sbjct: 344 KEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAI 403
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
L+ V + E ++ + +KT N E ++D + G+ +A+ + + +
Sbjct: 404 LTVHYPVFVSE---MHAEVIKT--NYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKD 458
Query: 499 PPGVWGALL-GAGRTHLNLDLAKLAAQHLME-LEPDSATPYVVLSDLYSVIGKKRDGNR 555
W A+L G +T + AKL Q + E ++P+ T V++ S G +
Sbjct: 459 LMA-WSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQ 516
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 196/605 (32%), Positives = 323/605 (53%), Gaps = 50/605 (8%)
Query: 9 YNAMITALINNNCSIYE-AFEIFATMPMRNAV----SYAAMITGFVRRGMFYEAEELYVN 63
+ A+I NN YE AF F M N V + A+++ R G + + +Y
Sbjct: 70 WTALIHGFTENN--QYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVY-G 126
Query: 64 MPARWR---DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ R D V N +I +++ G A ++F+ M E+D V+W SM+ GY GRV
Sbjct: 127 LAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDI 186
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD+M E+NV++WT+M+ GY+K A + + +LFE
Sbjct: 187 ARKLFDRMEERNVISWTSMIQGYVK-------------------AGDLLEARVLFE---- 223
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
R E D+ +++ Y +G + A +F +M D +WN +
Sbjct: 224 --RMPEK--------------DLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLM 267
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
ISG GE++ A F+RM ++ SW +I G+ G+++ + +F+ MPEK+ V W+
Sbjct: 268 ISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWS 327
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+I G+ + + + + ++P++ ++SA + + + V
Sbjct: 328 TMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGP 387
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
++ ++ + SL+ +Y+KCGN+ A ++F +D++++ Y+++I+ FA +GL E+A++LF
Sbjct: 388 SLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLF 447
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M+ + P+ + FL VL+ACNH GLV EG F+ M Y I+P +HYACMVDILGR
Sbjct: 448 SEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGR 507
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA LI SM P VWGALL A R HLN+ LA+ AA L ++EP+++ YV+L
Sbjct: 508 AGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLL 567
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
++Y+ G+ D ++VR + R+RK+ G SWI L +H F+ G KS D + I L
Sbjct: 568 FNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWIELGSVIHEFVMGDKSHFDSERIFFML 627
Query: 601 QTISK 605
+ + K
Sbjct: 628 ELLCK 632
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 212/381 (55%), Gaps = 13/381 (3%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G V A ++FD+ PE N WTA++ G+ + + +E+ F F+ M R + + T+
Sbjct: 46 YSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTI 105
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ +A R R ++G V+GL R G+++D+++ N +I ++ R G M A ++F M +
Sbjct: 106 ASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEE 165
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
RDAVSWNS+I+GY +NG ++ A +LF+RM ++ +SWT+MI G+ G+L ++ LF M
Sbjct: 166 RDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERM 225
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
PEKD +W ++S +++ A F M DV L +S A ++
Sbjct: 226 PEKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKA----GEMDAAK 281
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
+ + + N+ S V I + Y K G+V A +F + E+N+V++++MI G+A+ G
Sbjct: 282 EFFDRMQERNVASWVMI----IDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTG 337
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE--EGFIYFKSMKTLYNIEPGPE 469
+L L++ K++G+ P++ L ++SAC+ +G+ + E I +L+ P +
Sbjct: 338 HPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSLF---PNLQ 394
Query: 470 HYACMVDILGRAGSLAEAIDL 490
++D+ + G++ A+ +
Sbjct: 395 VVTSLIDMYAKCGNIERAVQV 415
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 180/385 (46%), Gaps = 23/385 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R + S+N+MIT NN + A ++F M RN +S+ +MI G+V+ G EA L
Sbjct: 163 MEERDAVSWNSMITGY-GNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVL 221
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP +D ++S Y+ VG A +FE M DV W M+ G CK G +
Sbjct: 222 FERMPE--KDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDA 279
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+E FD+M E+NV +W ++DGY+KV + +F M N + + + +
Sbjct: 280 AKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEK----NLVAWSTMIGGYAK 335
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF------SMMSKRDA 234
++++ G D II+ +LG D A V S+
Sbjct: 336 TGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQV 395
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP-- 292
V+ SLI Y G IE A ++FE + KD ++T+IT F++ G E +I LF+ M
Sbjct: 396 VT--SLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKA 453
Query: 293 --EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQ 349
+ D V + +++ + E R F +M+ + ++P++ + ++ L +
Sbjct: 454 NIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEE 513
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVS 374
H+ + M + + ++ +L+S
Sbjct: 514 A---HSLICSMPVAPNATVWGALLS 535
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMN--MESDVSIQNSLVSLYSKCGNVVDAYR 387
N +S +L + TL + IHAH++ SD+++ N L+ LYSK G V A++
Sbjct: 2 NHSLISKLLKQCRSLKTL---TTIHAHLLISGSIASSDLTL-NKLLRLYSKFGAVSYAHK 57
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F E N + ++I GF +N E A F KM E +VP T SVL A + +G
Sbjct: 58 LFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGR 117
Query: 448 VEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
+++G +Y +++ Y + ++ M+++ R G + A + + M E W ++
Sbjct: 118 IKDGDLVYGLAVRCGYEFDLVVKN--VMIELFMRCGEMGSARQMFDEME-ERDAVSWNSM 174
Query: 507 LGAGRTHLNLDLAK 520
+ + +D+A+
Sbjct: 175 ITGYGNNGRVDIAR 188
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/606 (32%), Positives = 327/606 (53%), Gaps = 45/606 (7%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRD---SVCSNALISGYLKVGR---CEEAARIFEA 96
AM+ G+++ G + E EL+ M +R + C+ AL + + E + E
Sbjct: 100 AMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEK 159
Query: 97 MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF 156
+EK+ SM+ K G++ EA+ +FD MP K+VV W +++ GY++ CF+ F LF
Sbjct: 160 GMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLF 219
Query: 157 LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
M G+ + IT+T L +ACG + G +HG V G DI++ S + MY ++
Sbjct: 220 FEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKM 279
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMI 272
G ++ A VF M R+ VSWN++ISG V NG + E++ LF R+ G D + +++
Sbjct: 280 GDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLL 339
Query: 273 TG----------------------------------FSSKGNLEKSIELFNMMPEKDDVT 298
G +S G+L+++ +FN M +++ +T
Sbjct: 340 QGCSQTASLATGKILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVIT 399
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA++ G N E+A R F +M + + N +T S++ + A +L +G IH H+
Sbjct: 400 WTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLF 459
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEAL 417
++ D+ +LV +Y+KCG + A RIF++ +++V +NSMI+G+ +G G +A+
Sbjct: 460 RLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAV 519
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
++ KM +EGL PNQ TFLS+LSAC+H LVE+G F SM+ +NI P +HYAC+VD+
Sbjct: 520 GIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDL 579
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
L RAG EA LI M F+P V ALL RTH N++L + L+ L+ + Y
Sbjct: 580 LSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIY 639
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
++LS++Y+ + + +R + + ++K+PG S + + VH F AG S + +EI
Sbjct: 640 IMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIY 699
Query: 598 VTLQTI 603
L+++
Sbjct: 700 HFLESL 705
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 199/400 (49%), Gaps = 40/400 (10%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A+I + D +V Y + AR +FD+ + + AM+ GY++ +
Sbjct: 53 AQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYR 112
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ +LF MR + +S + T +AC Y G+++ G + + +G+S+I
Sbjct: 113 ETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMI 172
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--------- 261
+ + G + EA +VF M +D V WNS+I GYV G + A++LF M
Sbjct: 173 SFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPI 232
Query: 262 ------------------------------GKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
G D + T+ + +S G++E + +F M
Sbjct: 233 TMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKM 292
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
P ++ V+W A+ISG V N E+F F ++R + T+ S+L + TA+L G
Sbjct: 293 PTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGK 352
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
+H ++ + ES++ + ++V LYSKCG++ A +F + +RN++++ +M+ G AQNG
Sbjct: 353 ILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNG 411
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
E+AL LF +M++EG+ N +TF+S++ +C H+G ++ G
Sbjct: 412 HAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRG 451
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 201/429 (46%), Gaps = 61/429 (14%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW- 68
++MI+ L+ I EA +F MP ++ V + ++I G+V+ G F A +L+ M
Sbjct: 169 SSMISFLVKFG-KIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGI 227
Query: 69 -RDSVCSNALIS-----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
+ +LI G LK+G+C + + D++ S VD Y K G + AR
Sbjct: 228 KPSPITMTSLIQACGGIGNLKLGKCMH-GYVLGLGLGNDILVLTSFVDMYSKMGDIESAR 286
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+F KMP +N+V+W AM+ G ++ + FDLF + R F+ T+ L + C +
Sbjct: 287 WVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTA 346
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G +HG R F+ ++IL +I+ +Y + G + +A VF+ M R+ ++W +++
Sbjct: 347 SLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLV 405
Query: 243 GYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEK-------------SI 285
G NG E+A RLF +M + V++ +++ + G+L++ +
Sbjct: 406 GLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAF 465
Query: 286 ELFNMMP-----------------------EKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
++ NM KD V W ++I+G+ + +A + +M
Sbjct: 466 DIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKM 525
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ------NSLVSLY 376
+ + ++PNQ T S+LSA + + + QG + +ME D +I+ LV L
Sbjct: 526 IEEGLKPNQTTFLSLLSACSHSRLVEQGISLFN-----SMERDHNIRPIEKHYACLVDLL 580
Query: 377 SKCGNVVDA 385
S+ G +A
Sbjct: 581 SRAGRFEEA 589
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 170/345 (49%), Gaps = 30/345 (8%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGR 86
+F MP RN VS+ AMI+G VR G+ E+ +L+ + + D +L+ G
Sbjct: 288 VFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQG------ 341
Query: 87 CEEAARIFEAMV---------EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
C + A + + E +++ ++VD Y K G + +A +F++M ++NV+ WT
Sbjct: 342 CSQTASLATGKILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWT 401
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
AM+ G + ED LF M+ G+A NS+T L +C + G +HG + R
Sbjct: 402 AMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRL 461
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYRL 256
GF +DI+ +++ MY + G ++ A ++FS S +D V WNS+I+GY +G +A +
Sbjct: 462 GFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGI 521
Query: 257 FERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFV 307
+ +M + ++ ++++ S +E+ I LFN M ++ + ++
Sbjct: 522 YHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLS 581
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
++EEA + IE + +P L ++LS +N G Q
Sbjct: 582 RAGRFEEA-QALIE--KMPFQPGTAVLEALLSGCRTHKNINLGIQ 623
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
HA ++ ++ +D + LV YS ++ A +F + + N+M+ G+ Q+G
Sbjct: 52 HAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRY 111
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY-- 471
E L LF M+ L + + L AC E G S +E G E
Sbjct: 112 RETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSA-----VEKGMEKNRF 166
Query: 472 --ACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGA 509
+ M+ L + G + EA + + M P V W +++G
Sbjct: 167 VGSSMISFLVKFGKIGEAQRVFDGM---PNKDVVCWNSIIGG 205
>gi|449456490|ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/653 (30%), Positives = 345/653 (52%), Gaps = 79/653 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEA---------------EELYVNMPARWRD 70
A +F MP+R+ VS+ MI+G+ + G + EA E + ++ +
Sbjct: 56 AQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFSSLLSICAH 115
Query: 71 SVCSN----------------------ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
S CS+ AL+ Y + A ++F+ + +K+ + W +
Sbjct: 116 SGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKNDLLWDLL 175
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD--CFEDGFDLFLSMRRGG-MA 165
+ GY K + +A ++F K+P ++VVAWT M+ Y + + C + G +LF SMR G +
Sbjct: 176 LVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHNC-KRGLELFCSMRMNGEVE 234
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL--------- 216
N T + ACGR G VHG+++++GF +D + +++I Y +
Sbjct: 235 PNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDNAKAV 294
Query: 217 ----------------------GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
G +++A ++F + +++ VS+N ++ GY +G IE +
Sbjct: 295 YDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSK 354
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF-NMMPEKDDVTWTAIISGFVNNEQYE 313
RLFERM K S TMI+ +S G ++K+ +LF ++ E D VTW ++ISG + N Q+E
Sbjct: 355 RLFERMTHKTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGCIQNHQHE 414
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A + +I M R V ++ T S++ A + G +H H ++ +S+V + SL+
Sbjct: 415 GALKLYITMCRTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLI 474
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y+KCG++ DA F ++ N+ ++ ++I+G+ +GLG EA ++F +M + PN
Sbjct: 475 DMYAKCGSIYDAQTSFASVCFPNVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGA 534
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
T L +LSAC+ G+V+EG F SM+ Y + P EHYAC+VD+LGR+G L EA I
Sbjct: 535 TLLGILSACSCAGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRC 594
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK---K 550
M E +WGALL A ++L+L + A+ ++ L+P + + Y++LS++Y+ +GK K
Sbjct: 595 MPIEADRVIWGALLNACWFWMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEK 654
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ R M K+K+IR GCSWI + +K +F AG +S + I TL+ +
Sbjct: 655 INVRRQLMSLKVKKIR---GCSWIDVNNKTCVFSAGDRSHPNCNAIYSTLEHL 704
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 202/452 (44%), Gaps = 51/452 (11%)
Query: 80 GYLKVGRCEEAARIFEAMVE------KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
G K R + +F + E ++++ + + + G + A+ +F++MP ++V
Sbjct: 9 GTWKHNRWKACLELFSTLCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSV 68
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W M+ GY K + + +L M + N T + L C EG Q H L
Sbjct: 69 VSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCL 128
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V + G +G++++ Y + + A +VF + ++ + W+ L+ GYV +++A
Sbjct: 129 VLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDA 188
Query: 254 YRLFERMPGKDFVSWTTMITGFS-SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
LF ++P +D V+WTTMI+ ++ S+ N ++ +ELF M
Sbjct: 189 LDLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSMR-------------------- 228
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
+ +V PN+ T SV+ A L+ G +H + K D S+ ++L
Sbjct: 229 ----------MNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSAL 278
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ Y +C + +A ++ +++ + + NS++ G G +A +F K++++ N
Sbjct: 279 ILFYCQCEAIDNAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREK----NP 334
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSM--KTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+++ +L G +E F+ M KT ++ M+ + R G + +A L
Sbjct: 335 VSYNLMLKGYATSGRIEGSKRLFERMTHKTTSSLNT-------MISVYSRNGEIDKAFKL 387
Query: 491 INSMTFEPPPGVWGALL-GAGRTHLNLDLAKL 521
S+ E P W +++ G + H + KL
Sbjct: 388 FESVKSEGDPVTWNSMISGCIQNHQHEGALKL 419
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 164/414 (39%), Gaps = 130/414 (31%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVR------RGMFYEAEELYVNM-------------- 64
+A ++F +P R+ V++ MI+ + R RG+ EL+ +M
Sbjct: 187 DALDLFMKIPTRDVVAWTTMISAYARSEHNCKRGL-----ELFCSMRMNGEVEPNEFTFD 241
Query: 65 -----PARWR--------------------DSVCSNALISGYLKVGRCEEAARIFEAMVE 99
R R SVCS ALI Y + + A ++++M
Sbjct: 242 SVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCS-ALILFYCQCEAIDNAKAVYDSMER 300
Query: 100 KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM 159
+ A S+++G GR+ +A EIF K+ EKN V++ M+ GY E LF M
Sbjct: 301 PCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATSGRIEGSKRLFERM 360
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
H S N++I++Y R G +
Sbjct: 361 ------------------------------THKTTSSL---------NTMISVYSRNGEI 381
Query: 220 DEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEEAYR-------------------LFER 259
D+A K+F S+ S+ D V+WNS+ISG + N + E A + LF+
Sbjct: 382 DKAFKLFESVKSEGDPVTWNSMISGCIQNHQHEGALKLYITMCRTSVERSRSTFSALFQA 441
Query: 260 MPGKDFVSW--------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+++ T++I ++ G++ + F + + +
Sbjct: 442 CTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCFPNVAAF 501
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
TA+I+G+V++ EAF F EML+ V PN TL +LSA + + +G +
Sbjct: 502 TALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTV 555
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/631 (32%), Positives = 328/631 (51%), Gaps = 54/631 (8%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS-------VCSN 75
I EA ++F M R+ +S+ +I G+V EA L+ NM W DS V S
Sbjct: 100 ICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNM---WVDSGLQKDQFVVSV 156
Query: 76 ALISGYLKV----GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
AL + L + G + ++ V+ ++VD Y K G+ + +F+ M +
Sbjct: 157 ALKACALGMNVYFGELLHGFSVKSGLINSVFVS-SALVDMYMKVGKTEQGCSVFENMTTR 215
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
NVV+WTA++ G + C DG F M R + ++S T + +A G +H
Sbjct: 216 NVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIH 275
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ GF+ + N++ TMY + D ++F MS D VSW +LI YV G+ E
Sbjct: 276 AQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEE 335
Query: 252 EAYRLFERMPGKD-------------------FVSW--------------------TTMI 272
A F+RM D W ++I
Sbjct: 336 RALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSII 395
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
T +S G L+++ +F+ M KD ++W+ IIS + +EAF + M R+ +PN+
Sbjct: 396 TLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEF 455
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
L+SVLS + A L G Q+HA+ + + ++ + + ++L+S+YS+ GN+ +A +IF +I
Sbjct: 456 ALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSI 515
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+IVS+ +MI+G+A++G +EA++LF + GL+P+ +TF+ +L+ACNH GLV+ GF
Sbjct: 516 KNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGF 575
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
Y+K M Y I P EHY C++D+L RAG L+EA ++ +M F VW LL A R
Sbjct: 576 YYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRD 635
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H +LD A AA+ ++ L P+SA ++ L+++YS G++ + VR K K + K PG S
Sbjct: 636 HGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWS 695
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
WI D+++ F+AG +S K+I L+ +
Sbjct: 696 WINSNDQLNTFVAGVQSHPLSKQITTILELL 726
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 203/425 (47%), Gaps = 49/425 (11%)
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLT 172
K G++ EAR++F+KM ++ ++WT ++ GY+ + LF +M G+ + ++
Sbjct: 96 KLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVS 155
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ +AC G +HG + G + + ++++ MY ++G ++ VF M+ R
Sbjct: 156 VALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTR 215
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLE--KSIE 286
+ VSW ++I G VH G + F M G D ++ + + G L K+I
Sbjct: 216 NVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIH 275
Query: 287 ---------------------------------LFNMMPEKDDVTWTAIISGFVNNEQYE 313
LF M D V+WT +I +V E
Sbjct: 276 AQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEE 335
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A F M + DV PN+ T +SV+SA A A G QIH H +++ + +S+ NS++
Sbjct: 336 RALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSII 395
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+LYSKCG + +A +F + ++I+S++++IS + Q +EA N M EG PN+
Sbjct: 396 TLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEF 455
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH----YACMVDILGRAGSLAEAID 489
SVLS C + L+E G K + Y + G +H ++ ++ + R+G+L EA
Sbjct: 456 ALASVLSVCGSMALLEPG----KQVHA-YALCIGLDHETMVHSALISMYSRSGNLQEASK 510
Query: 490 LINSM 494
+ +S+
Sbjct: 511 IFDSI 515
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 134/285 (47%), Gaps = 40/285 (14%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-----P 261
NS + +LG + EA +F+ MS RD +SW +LI+GYV+ EA LF M
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147
Query: 262 GKDF---------------VSWTTMITGFSSK--------------------GNLEKSIE 286
KD V + ++ GFS K G E+
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+F M ++ V+WTA+I G V+ + +F EM R V + T + L ASA +
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L+ G IHA +K + N+L ++YSKC R+F + ++VS+ ++I
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMT 327
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ Q G E AL+ F++M+ + PN+ TF SV+SAC ++ + + G
Sbjct: 328 YVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWG 372
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
NS + + G+I EA +F +M +D +SWT +I G+ + N +++ LF+ M
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNM------ 141
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
W L+KD Q +S L A A + G +H
Sbjct: 142 --------------------WVDSGLQKD----QFVVSVALKACALGMNVYFGELLHGFS 177
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
VK + + V + ++LV +Y K G +F N+ RN+VS+ ++I G G + L
Sbjct: 178 VKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGL 237
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYN 463
+ F +M + + TF L A GL+ G I+ +++K +N
Sbjct: 238 SYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFN 284
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
D + ++A+I+ + + + ++ EA +IF ++ + VS+ AMI G+ G EA L+
Sbjct: 486 DHETMVHSALIS-MYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFE 544
Query: 63 NMPA--RWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA-----WGSMVDGYCKK 115
N+ + D V +++ G + ++ M + +A +G ++D C+
Sbjct: 545 NISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRA 604
Query: 116 GRVIEAREIFDKMP-EKNVVAWTAMV 140
GR+ EA + MP + V W+ ++
Sbjct: 605 GRLSEAEHMVRNMPFPCDDVVWSTLL 630
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/552 (36%), Positives = 308/552 (55%), Gaps = 57/552 (10%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA 96
++ S+A I + G F EA LYV M RW + AL S R A R+
Sbjct: 69 DSFSWACAIRFSTQHGQFKEAFALYVQM-QRWGLCPTTFALSSALKACARI--AYRMGGI 125
Query: 97 MVEKDVVAWG------------SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
+ V +G ++VD YCK G + AR++FD+M E+NVV+W +M+ GY+
Sbjct: 126 SIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 185
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
K DL ++ R F+ I D+I
Sbjct: 186 KSG------DLVVAQR----VFDEIP-----------------------------QKDVI 206
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
NS+I+ Y R G M++A+ +F M +R+ SWN++ISG+V G+I+ A F+ MP K+
Sbjct: 207 SWNSMISGYARAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKN 266
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
VSW TMI+G+S G+++ + ELF+ + KD + + A+I+ + N + EA F ML
Sbjct: 267 NVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLN 326
Query: 325 K--DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+V+P+++TL+SV+SA + L G I +++ ++ +E D + +L+ LY+KCG++
Sbjct: 327 PYVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSI 386
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
AY +F + ++++V+Y +MI G NG +A+ LF +M D + PN ITF+ +L+A
Sbjct: 387 DKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAY 446
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
NH GLVEEG+ F SMK YN+ P +HY MVD+ GRAG L EA++LI SM +P GV
Sbjct: 447 NHAGLVEEGYRCFTSMKK-YNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGV 505
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WGALL A R H N++ ++AAQH ELEPD+ +LS++Y+ + D R+R K
Sbjct: 506 WGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKE 565
Query: 563 KRIRKSPGCSWI 574
K K PGCSW+
Sbjct: 566 KGFSKIPGCSWM 577
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 166/307 (54%), Gaps = 15/307 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
MA+R S+N+M+ + + + A +F +P ++ +S+ +MI+G+ R G +A L
Sbjct: 169 MAERNVVSWNSMLAGYLKSG-DLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKASSL 227
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ NA+ISG+++ G + A F+AM +K+ V+W +M+ GY K G V
Sbjct: 228 FQQMPE--RNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDS 285
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG--GMAFNSITLTILFEAC 178
A E+FD++ K+++ + AM+ Y + + +LF +M + + +TL + AC
Sbjct: 286 ACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISAC 345
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ R G + + R G + D L +++ +Y + G +D+A ++F + K+D V++
Sbjct: 346 SQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYT 405
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK------SIELF 288
++I G NG+ +A +LF+ M +++ ++T ++ G +E+ S++ +
Sbjct: 406 AMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKY 465
Query: 289 NMMPEKD 295
N++P D
Sbjct: 466 NLVPSVD 472
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 190/568 (33%), Positives = 309/568 (54%), Gaps = 40/568 (7%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
+ + +A ++ + Y K R +AR +FD+MP ++ VAW A+V GY + E + +
Sbjct: 256 LSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVV 315
Query: 158 SMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
M+ G +++TL + AC +VH R GFD + + +I+ +Y +
Sbjct: 316 RMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKC 375
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF-VSWTTMITGF 275
G +D A KVF M R++VSWN++I GY NG+ EA LF+RM G+ V+ +++
Sbjct: 376 GAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAAL 435
Query: 276 SSKGNL--------------------------------------EKSIELFNMMPEKDDV 297
+ G L + + ++F+ + K V
Sbjct: 436 HACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRV 495
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W A+I G N E+A R F M ++V+P+ TL S++ A A + Q IH +
Sbjct: 496 SWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYS 555
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
++++++ DV + +L+ +Y+KCG V A +F + +R+++++N+MI G+ +G G+ A+
Sbjct: 556 IRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAV 615
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
LF +MK G VPN+ TFLSVLSAC+H GLV+EG YF SMK Y +EPG EHY MVD+
Sbjct: 616 ELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDL 675
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGRAG L EA I M EP V+GA+LGA + H N++LA+ +AQ + ELEP+ +
Sbjct: 676 LGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYH 735
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
V+L+++Y+ +D RVR + K ++K+PG S + LK+++H F +G + K+I
Sbjct: 736 VLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIY 795
Query: 598 VTLQTISKGTKEFDWPKHDWSLLGLERD 625
L + + K + S+ +E D
Sbjct: 796 ARLAKLIEEIKAVGYVPDTDSIHDVEDD 823
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 202/456 (44%), Gaps = 52/456 (11%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS----- 79
+A +F MP R+ V++ A++ G+ R G+ A + V M + + L+S
Sbjct: 278 DARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPAC 337
Query: 80 -GYLKVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+G C E A ++ V +++D YCK G V AR++FD M ++N V+W
Sbjct: 338 ADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWN 397
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
AM+ GY + + LF M G+ +++ ACG EG +VH L+ R
Sbjct: 398 AMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRI 457
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G + ++ + N++ITMY + D A +VF + + VSWN++I G NG E+A RLF
Sbjct: 458 GLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLF 517
Query: 258 ERM----------------PG-----------------------KDFVSWTTMITGFSSK 278
RM P +D T +I ++
Sbjct: 518 SRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 577
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G + + LFN ++ +TW A+I G+ ++ + A F EM PN+ T SVL
Sbjct: 578 GRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVL 637
Query: 339 SASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERN 396
SA + +++G + + + + +E + ++V L + G + +A+ + E
Sbjct: 638 SACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPG 697
Query: 397 IVSYNSMISGFAQNG---LGEE-ALNLFRKMKDEGL 428
I Y +M+ + L EE A +F +EG+
Sbjct: 698 ISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGV 733
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 174/365 (47%), Gaps = 43/365 (11%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T T L + C G VH ++ G + + ++ MY + +A +VF M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVSWTTMIT----------- 273
RD V+WN+L++GY NG E A + RM + D V+ +++
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346
Query: 274 ----------GFSSKGNLEKSI--------------ELFNMMPEKDDVTWTAIISGFVNN 309
GF + N+ +I ++F+ M +++ V+W A+I G+ N
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
EA F M+ + V +++ + L A L++G ++H +V++ +ES+V++
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N+L+++Y KC A ++F + + VS+N+MI G QNG E+A+ LF +M+ E +
Sbjct: 467 NALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVK 526
Query: 430 PNQITFLSVLSACNHVG-LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
P+ T +S++ A + ++ +I+ S++ +++ ++D+ + G ++ A
Sbjct: 527 PDSFTLVSIIPALADISDPLQARWIHGYSIR--LHLDQDVYVLTALIDMYAKCGRVSIAR 584
Query: 489 DLINS 493
L NS
Sbjct: 585 SLFNS 589
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 13/293 (4%)
Query: 14 TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TA+++ C ++ A ++F M RN+VS+ AMI G+ G EA L+ M D
Sbjct: 366 TAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVD 425
Query: 71 --SVCSNALISGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREI 124
V A + ++G +E R+ E +V E +V +++ YCK R A ++
Sbjct: 426 VTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQV 485
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD++ K V+W AM+ G + ED LF M+ + +S TL + A
Sbjct: 486 FDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDP 545
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
+ +HG R D D+ + ++I MY + G + A +F+ R ++WN++I GY
Sbjct: 546 LQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGY 605
Query: 245 VHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGNLEKSIELFNMMPE 293
+G + A LFE M V ++ ++++ S G +++ E F+ M E
Sbjct: 606 GSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKE 658
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P T +S+L AA A L G +HA + + + +L ++Y+KC DA R+
Sbjct: 223 PVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRV 282
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE-GLVPNQITFLSVLSAC 442
F + R+ V++N++++G+A+NGL E A+ + +M++E G P+ +T +SVL AC
Sbjct: 283 FDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPAC 337
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 98/275 (35%), Gaps = 54/275 (19%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
+T S+NAMI N S +A +F+ M + N F + ++
Sbjct: 492 KTRVSWNAMILGCTQNGSS-EDAVRLFSRMQLENVKP-----DSFTLVSIIPALADISDP 545
Query: 64 MPARW-----------RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY 112
+ ARW +D ALI Y K GR A +F + ++ V+ W +M+ GY
Sbjct: 546 LQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGY 605
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
G G + V+ FE+ M+ G N T
Sbjct: 606 GSHG------------------------SGKVAVELFEE-------MKSSGKVPNETTFL 634
Query: 173 ILFEACGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ AC EG + + +G + + +++ + GR G + EA M
Sbjct: 635 SVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPM 694
Query: 232 RDAVSWNSLISGYV---HNGEI--EEAYRLFERMP 261
+S + G N E+ E A R+FE P
Sbjct: 695 EPGISVYGAMLGACKLHKNVELAEESAQRIFELEP 729
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/603 (33%), Positives = 317/603 (52%), Gaps = 53/603 (8%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY---VNMPARWRDSVCSNALIS 79
I EA +F MP R+ VS+ +MI G+ +RG+ EA L+ +N W+ V L +
Sbjct: 92 IKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLAT 151
Query: 80 --------GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
G ++G+C + + + D+ GS V YCK G + A FD++ K
Sbjct: 152 VLKACGGLGCSRIGKCVHGYAV-KIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENK 210
Query: 132 NVVAWTAMVDGYMKVDCFED-GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
++VAW M+ GY + +C+E+ +LF M G N T + +A G
Sbjct: 211 DIVAWNTMITGYAQ-NCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCF 269
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H V + G D+ + +++ MY + +++ + F MSKR+ VS+N+LI+GY G+
Sbjct: 270 HAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKY 329
Query: 251 EEAYRLFERMPGKDF--------------------------------------VSWTTMI 272
EEA R++ ++ + VS I
Sbjct: 330 EEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSI 389
Query: 273 TGFSSK-GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
F SK G + ++E F + + V W IISGF N + E+A F +M + + ++
Sbjct: 390 VNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDE 449
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ SSV+ A ++ A + QG +HAHV+K ++ + + ++++ +YSKCG V DA ++F+
Sbjct: 450 FSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSV 509
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ E+N+VS+NSMI+G+AQNG +EAL LF++M G++P +TF+ +L AC+H GLVEEG
Sbjct: 510 MPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEG 569
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
++ M Y I P EH CMVD+LGRAG L EA + S +F PG+WG+LL A
Sbjct: 570 RNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACG 629
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
H N D+ AAQH + LEP ++ Y LS++Y+ + +R+R K + K PGC
Sbjct: 630 VHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGC 689
Query: 572 SWI 574
SWI
Sbjct: 690 SWI 692
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 214/456 (46%), Gaps = 68/456 (14%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS--VCSNALISGYLKVGRCEEAARIF 94
NA++Y+A I+ + A L+ + + + S+ LIS Y K R +EA +F
Sbjct: 40 NAITYSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLF 99
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
+ M E+D V+W SM+ GY ++G EA +F M + W +V +
Sbjct: 100 DDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMI-NSCENWKLLVSDF----------- 147
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
TL + +ACG R G VHG + GFD D+ + S + MY
Sbjct: 148 ---------------TLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYC 192
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------- 261
+ G +D A F + +D V+WN++I+GY N EEA LF +M
Sbjct: 193 KCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCC 252
Query: 262 --------------------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
D T ++ +S ++E F M +++
Sbjct: 253 VLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRN 312
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V++ A+I+G+ +YEEA R + ++ + + P+ T + S+ + ++T+ +G+Q+H
Sbjct: 313 LVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHV 372
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
H VK ++SDVS+ NS+V+ YSKCG A F +I+ N V + +ISGFAQNG GE+
Sbjct: 373 HSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEK 432
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
AL F KM+ ++ + SV+ A + VE+G
Sbjct: 433 ALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQG 468
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 201/455 (44%), Gaps = 78/455 (17%)
Query: 97 MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF 156
M+E +VV W S + ++G V +A F
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQA-------------------------------LSCF 29
Query: 157 LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
L M R G+ N+IT + AC + R +H L+ + GF + + + +I+MY +
Sbjct: 30 LQMLRAGIEPNAITYSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSKH 89
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG---------KDFVS 267
+ EA +F M +RD VSWNS+I+GY G EEA LF M DF
Sbjct: 90 DRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTL 149
Query: 268 WTTM--------------ITGFSSK--------------------GNLEKSIELFNMMPE 293
T + + G++ K G L+ + F+ +
Sbjct: 150 ATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIEN 209
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
KD V W +I+G+ N EEA F +M + +PN T VL AS A + G
Sbjct: 210 KDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCF 269
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
HA V+K+ DV + +LV +YSK ++ D R F + +RN+VS+N++I+G++ G
Sbjct: 270 HAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKY 329
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYA 472
EEAL ++ +++ EG+ P+ TF+ + S+C+ V EG ++ S+K + ++
Sbjct: 330 EEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVK--FGLDSDVSVGN 387
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+V+ + G A++ S+ P W ++
Sbjct: 388 SIVNFYSKCGFTDSALEAFESIN-RPNSVCWAGII 421
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/461 (37%), Positives = 280/461 (60%), Gaps = 5/461 (1%)
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
MPE+NVV+WT+++ GY + + + + M + G+ + T + +AC G
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
Q+H V + F II N++I+MY + + +A VFS M+ RD +SW S+I+G+
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 248 GEIEEAYRLFERMPGK---DFVSWTTMITGFSSKGNLEKSIELFN-MMPEKDDVTWTAII 303
G EA F+ M + D V+W +I GF+ G L +I F M D V+W AI+
Sbjct: 121 GYELEALCYFKEMLHQGRPDLVAWNAIIAGFA-YGELRDAIFFFEEMRCNADLVSWNAIL 179
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
+ + ++Q EE FR M RP+ +TL++VL ASA T ++ G+Q+H + +K +
Sbjct: 180 TACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLN 239
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
D S+ N L+ LY+KCG++ A++IF ++ ++VS++S+I G+AQ G GEEAL LF+ M
Sbjct: 240 CDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTM 299
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
+ + PN +TF+ VL+AC+HVGLVEEG+ + +M+ + I P EH +CMVD+L RAG
Sbjct: 300 RRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGC 359
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
L EA I+ M F+P VW LL A +TH N+D+ K AA+++++++P ++ +V+L ++
Sbjct: 360 LNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNI 419
Query: 544 YSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
Y+ G D R+R K + +RK PG SWI +KD++H+F
Sbjct: 420 YASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFF 460
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 186/445 (41%), Gaps = 84/445 (18%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR----------------- 69
MP RN VS+ ++I G+ + G A E Y M P ++
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 70 --------------DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
+ NALIS Y K +A +F M +D+++WGSM+ G+ +
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 116 GRVIEAREIFDKMPEK---NVVAWTAMVDGY----------------------------- 143
G +EA F +M + ++VAW A++ G+
Sbjct: 121 GYELEALCYFKEMLHQGRPDLVAWNAIIAGFAYGELRDAIFFFEEMRCNADLVSWNAILT 180
Query: 144 --MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
M+ D E+ F L M + ITLT + A G QVH + G +
Sbjct: 181 ACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNC 240
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D + N +I +Y + G + A+K+F M D VSW+SLI GY G EEA +LF+ M
Sbjct: 241 DTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMR 300
Query: 262 GKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT-----AIISGFVNNEQY 312
D V++ ++T S G +E+ +L+ M ++ + T ++
Sbjct: 301 RLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCL 360
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA FI + D P+ + ++L+A ++ G + +++K++ S+ + L
Sbjct: 361 NEA-EGFIHQMAFD--PDIVVWKTLLAACKTHGNVDVGKRAAENILKID-PSNSAAHVLL 416
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNI 397
++Y+ GN D R+ + + +R +
Sbjct: 417 CNIYASKGNWEDVARLRSLMKQRGV 441
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 328/612 (53%), Gaps = 49/612 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRD-----SVCS 74
S+ +A ++F TM + N VS+ +MI+G+ + G +A +Y+ M ++ D SV
Sbjct: 209 SMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIK 268
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
I+G + +GR + A + ++ + + +++ Y G++ A +F ++P K+++
Sbjct: 269 ACYIAGDIDLGR-QLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLI 327
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+W M+ GY+++ + LF + R+G N +F AC G QVHG+
Sbjct: 328 SWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGM 387
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+FG ++ G S+ MY + GF+ A F + D VSWN++I+ + NG+ EA
Sbjct: 388 CVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEA 447
Query: 254 YRLFERM--------------------------PGKDFVSW-------------TTMITG 274
F +M G+ S+ +++T
Sbjct: 448 IDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTM 507
Query: 275 FSSKGNLEKSIELFNMMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ +L ++ +F + + V+W AI+S + +Q E FR + EM +P+ +T
Sbjct: 508 YTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSIT 567
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
++++L A +L G+Q+H + +K + DVS+ N L+ +Y+KCG++ A +F +
Sbjct: 568 ITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQ 627
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+IVS++S+I G+AQ GLG EALNLFR M + G+ PN++T+L LSAC+H+GLVEEG+
Sbjct: 628 NLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWR 687
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+KSM+T + I P EH++C+VD+L RAG L EA I + W LL A +TH
Sbjct: 688 LYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTH 747
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N+D+A+ A ++++L+P ++ V+L ++++ G + ++R K ++K PG SW
Sbjct: 748 NNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSW 807
Query: 574 IILKDKVHLFLA 585
I +KDK H+F +
Sbjct: 808 IEVKDKFHIFFS 819
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 247/514 (48%), Gaps = 58/514 (11%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
+ ++ + ++ M++ Y K G + +AR++FD M NVV+WT+M+ GY + D
Sbjct: 184 HVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQAND 243
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
+++ M R G + +T + +AC G Q+H V + F + + N++I+
Sbjct: 244 AIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALIS 303
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF------------ER 259
MY G ++ A+ VF+ + +D +SW ++I+GY+ G EA LF E
Sbjct: 304 MYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEF 363
Query: 260 MPGKDFVSWTTM--------ITGFSSKGNLEKSI----------ELFNMMPE-------- 293
+ G F + +++ + G K L +++ F +P
Sbjct: 364 IFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQI 423
Query: 294 --KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
D V+W AII+ F +N EA +F +M+ + P+ +T S+L + LNQG
Sbjct: 424 KNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGR 483
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER-NIVSYNSMISGFAQN 410
QIH+++VK+ + ++++ NSL+++Y+KC ++ DA +F +I N+VS+N+++S Q
Sbjct: 484 QIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQK 543
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG--P 468
E L+++M G P+ IT ++L C + + G + Y+I+ G
Sbjct: 544 KQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVG-----NQVHCYSIKSGLIL 598
Query: 469 EHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL----GAGRTHLNLDLAKLA 522
+ C ++D+ + GSL A D+ +S T W +L+ G H L+L ++
Sbjct: 599 DVSVCNGLIDMYAKCGSLKHARDVFDS-TQNLDIVSWSSLIVGYAQCGLGHEALNLFRIM 657
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
+ ++P+ T LS S IG +G R+
Sbjct: 658 TN--LGVQPNEVTYLGALSAC-SHIGLVEEGWRL 688
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 155/332 (46%), Gaps = 42/332 (12%)
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ FD L + F T T L AC F ++H V + + IIL N +I
Sbjct: 144 EAFDFHL--KNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMI 201
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--------- 261
MYG+ G M +A KVF M + VSW S+ISGY NG+ +A ++ +M
Sbjct: 202 NMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQL 261
Query: 262 ------------------------------GKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
G S +I+ +++ G +E + +F +
Sbjct: 262 TFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRI 321
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV-RPNQLTLSSVLSASAATATLNQG 350
P KD ++W +I+G++ EA F ++LR+ +PN+ SV SA ++ L G
Sbjct: 322 PTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYG 381
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q+H VK + +V SL +Y+K G + A F I +IVS+N++I+ FA N
Sbjct: 382 KQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADN 441
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
G EA++ FR+M GL P+ IT++S+L C
Sbjct: 442 GDANEAIDFFRQMIHIGLTPDSITYISLLCTC 473
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 175/394 (44%), Gaps = 54/394 (13%)
Query: 7 ASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA 66
S NA+I+ + N I A +F +P ++ +S+ MITG+++ G Y E LY+
Sbjct: 296 TSQNALIS-MYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLG--YRVEALYLFRDL 352
Query: 67 RWRDSVCSNALISGYLKVGRCE-----EAARIFEAM-----VEKDVVAWGSMVDGYCKKG 116
+ + N I G + C E + M + ++V A S+ D Y K G
Sbjct: 353 LRQGTYQPNEFIFGSV-FSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFG 411
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
+ A+ F ++ ++V+W A++ + + D F M G+ +SIT L
Sbjct: 412 FLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLC 471
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR-DAV 235
CG R +G Q+H + + GFD +I + NS++TMY + + +A VF +S+ + V
Sbjct: 472 TCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLV 531
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTT--------------------- 270
SWN+++S + + E +RL++ M D ++ TT
Sbjct: 532 SWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYS 591
Query: 271 --------------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
+I ++ G+L+ + ++F+ D V+W+++I G+ EA
Sbjct: 592 IKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEAL 651
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
F M V+PN++T LSA + + +G
Sbjct: 652 NLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEG 685
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EAF + ++ P+ T +S++ A A +L+ +IH HV+K N + + +QN ++
Sbjct: 144 EAFDFHLKNSNSHFEPS--TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMI 201
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
++Y KCG++ DA ++F + N+VS+ SMISG++QNG +A+ ++ +M G P+Q+
Sbjct: 202 NMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQL 261
Query: 434 TFLSVLSACNHVGLVEEG 451
TF SV+ AC G ++ G
Sbjct: 262 TFGSVIKACYIAGDIDLG 279
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 299/525 (56%), Gaps = 7/525 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y +G AR +FD +PE+NV+ + M+ YM ++D +F M GG + +
Sbjct: 73 LMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPD 132
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + +AC R G+Q+HG V + G D ++ +GN +I +YG+ G + EA V
Sbjct: 133 HYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLD 192
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFS--SKGNL 281
M +D VSWNS+++GY N + ++A + M G D + +++ + S N+
Sbjct: 193 EMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENV 252
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
E+F + +K V+W +IS ++ N ++ +++M + +V P+ +T +SVL A
Sbjct: 253 LYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRAC 312
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ L G +IH +V + + ++ ++NSL+ +Y++CG + DA R+F + R++ S+
Sbjct: 313 GDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWT 372
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
S+IS + G G A+ LF +M++ G P+ I F+++LSAC+H GL+ EG YFK M
Sbjct: 373 SLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDD 432
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I P EH+AC+VD+LGR+G + EA ++I M +P VWGALL + R + N+D+ L
Sbjct: 433 YKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGIL 492
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA L++L P+ + YV+LS++Y+ G+ + +R K +RIRK PG S + L ++VH
Sbjct: 493 AADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVH 552
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
FLAG KEI L + KE + PK D +L +E +
Sbjct: 553 TFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEE 597
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 153/354 (43%), Gaps = 62/354 (17%)
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
+KVF++ + L+ Y GE A +F+
Sbjct: 56 SKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFD------------------------ 91
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
++PE++ + + +I ++NN Y++A F +M+ P+ T VL A +
Sbjct: 92 -------VIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACS 144
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ L G Q+H V K+ ++ ++ + N L++LY KCG + +A + + +++VS+NS
Sbjct: 145 CSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNS 204
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLVEEGFIYFKS 457
M++G+AQN ++AL++ R+M P+ T S+L A +V VEE F+ +
Sbjct: 205 MVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEK 264
Query: 458 --------MKTLY--NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
M ++Y N PG VD+ + G D I + G ALL
Sbjct: 265 KSLVSWNVMISVYMKNSMPGKS-----VDLYLQMGKCEVEPDAITCASVLRACGDLSALL 319
Query: 508 GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV--RMK 559
R H ++ KL L+E L D+Y+ G D RV RMK
Sbjct: 320 LGRRIHEYVERKKLCPNMLLENS---------LIDMYARCGCLEDAKRVFDRMK 364
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 103/510 (20%), Positives = 193/510 (37%), Gaps = 121/510 (23%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------------PARWRDSVC 73
A +F +P RN + Y MI ++ ++ +A ++ +M P + C
Sbjct: 86 ARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSC 145
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
S+ L G G +F+ ++ ++ ++ Y K G + EAR + D+M K+V
Sbjct: 146 SDNLRIGLQLHGA------VFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDV 199
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG-----------RFF 182
V+W +MV GY + F+D D+ M ++ T+ L A F
Sbjct: 200 VSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMF 259
Query: 183 RYRE----------------------GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
E V ++ + + + D I S++ G L +
Sbjct: 260 MNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALL 319
Query: 221 EANKVFSMMSKR----DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFS 276
++ + ++ + + NSLI Y G +E+A R+F+RM +D SWT++I+ +
Sbjct: 320 LGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYG 379
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G Q A F EM P+ + +
Sbjct: 380 MTG-------------------------------QGYNAVALFTEMQNSGQSPDSIAFVA 408
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+LSA + + LN+G Y K + D Y+I I+
Sbjct: 409 ILSACSHSGLLNEG-----------------------KFYFK--QMTDDYKITPIIEH-- 441
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+ ++ ++G +EA N+ ++M + PN+ + ++LS+C ++ G +
Sbjct: 442 ---FACLVDLLGRSGRVDEAYNIIKQMP---MKPNERVWGALLSSCRVYSNMDIGILAAD 495
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+ L E G +Y + +I +AG E
Sbjct: 496 KLLQLAPEESG--YYVLLSNIYAKAGRWTE 523
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 18/231 (7%)
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H+ V ++ + S+ L+ Y+ G A +F I ERN++ YN MI + N L
Sbjct: 54 VHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHL 113
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLVEEGFIYFKSMKTLYNIEPG 467
++AL +FR M G P+ T+ VL AC+ +GL G ++ + + G
Sbjct: 114 YDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNG 173
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL- 526
++ + G+ G L EA +++ M + W +++ ++ D A + +
Sbjct: 174 ------LIALYGKCGCLPEARCVLDEMQSKDVVS-WNSMVAGYAQNMQFDDALDICREMD 226
Query: 527 -MELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+ +PD+ T ++ L + N + +++ + K SW ++
Sbjct: 227 GVRQKPDACT----MASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVM 273
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/519 (35%), Positives = 277/519 (53%), Gaps = 32/519 (6%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR IFD++ ++++ W ++ Y++ DG LF + + N TL + + C R
Sbjct: 66 ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPDN-FTLPCVIKGCAR 124
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+EG Q+HGL + GF D+ + S++ MY + G +D A KVF M +D V WNSL
Sbjct: 125 LGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSL 184
Query: 241 ISGYVHNGEI-------------------------------EEAYRLFERMPGKDFVSWT 269
I GY GEI E A +LF++MP ++ VSW
Sbjct: 185 IDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWN 244
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
MI G+ G+ + ++ELF MP D VTW +I+G+ N Q+ +A + F ML+ RP
Sbjct: 245 AMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRP 304
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ TL SVLSA + A L +G IH+++ K E D + SL+ +Y+KCG + A +F
Sbjct: 305 SHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVF 364
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
I ++ + + ++I G +G+ AL LF +M GL PN I F+ VL+ACNH GLV+
Sbjct: 365 RAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVD 424
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+G YF M Y IEP EHY C+VDIL RAG L EA + I +M P +W +LLG
Sbjct: 425 DGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGG 484
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
R H +D+ + AAQ ++E+ P++ Y++LS++Y+ G + VR + RK P
Sbjct: 485 SRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDP 544
Query: 570 GCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
GCS + K +H F+ G S KEI + + + K
Sbjct: 545 GCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLK 583
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 158/348 (45%), Gaps = 14/348 (4%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F M ++ V + ++I G+ R G A +L+ MP R D+ L+ G K G
Sbjct: 166 ARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPER--DAFSWTVLVDGLSKCG 223
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
+ E A ++F+ M +++V+W +M++GY K G A E+F +MP ++V W M+ GY
Sbjct: 224 KVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYEL 283
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
F D +F M + G + TL + A +G +H + + GF+ D IL
Sbjct: 284 NGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGIL 343
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
G S+I MY + G ++ A VF + K+ W ++I G +G A LF M
Sbjct: 344 GTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGL 403
Query: 266 ----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT-----AIISGFVNNEQYEEAF 316
+ + ++ + G ++ + F+MM + + T ++ EEA
Sbjct: 404 KPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAK 463
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
M + PN++ S+L S ++ G V+++ E+
Sbjct: 464 NTIENM---PISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPET 508
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/471 (36%), Positives = 274/471 (58%), Gaps = 40/471 (8%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
MR G N T + + A G Q+H L+ + GFD +I +G +++ MY +
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-----ERMPGKDFVSWTTMIT 273
M A +VF M +R+ VSWNS+I G+ HN + A +F E+ + VS +++++
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120
Query: 274 GFSSKGNL-----------------------------------EKSIELFNMMPEKDDVT 298
++ G L ++ ++LF + ++D VT
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W ++ GFV N+++EEA +F M R+ + P++ + S+VL +SA+ A L+QG+ IH ++
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K+ ++ I SL+++Y+KCG++VDAY++F I++ N++S+ +MIS + +G + +
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF M EG+ P+ +TF+ VLSAC+H G VEEG +F SMK ++++ PGPEHYACMVD+L
Sbjct: 301 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLL 360
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L EA I SM +P P VWGALLGA R + NL + + AA+ L E+EP + YV
Sbjct: 361 GRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYV 420
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+L+++ + G+ + N VR + +RK PGCSWI +K+ +F A +S
Sbjct: 421 LLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRS 471
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 192/446 (43%), Gaps = 82/446 (18%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ ++ ++VD Y K + A +FD+MPE+N+V+W +M+ G+ + ++ +F
Sbjct: 42 DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKD 101
Query: 159 -MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
+R + N ++++ + AC G QVHG+V +FG + NS++ MY +
Sbjct: 102 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCR 161
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTT--- 270
F DE K+F + RD V+WN L+ G+V N + EEA F M + D S++T
Sbjct: 162 FFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 221
Query: 271 --------------------------------MITGFSSKGNLEKSIELFNMMPEKDDVT 298
+IT ++ G+L + ++F + + + ++
Sbjct: 222 SSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVIS 281
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA+IS + + + F ML + + P+ +T VLSA + T + +G AH
Sbjct: 282 WTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGL---AHFN 338
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
M D++ Y M+ + G +EA
Sbjct: 339 SMKKIHDMNPGPE---------------------------HYACMVDLLGRAGWLDEAKR 371
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GPEHYACMVDI 477
M + P + ++L AC G ++ G ++ + L+ +EP P +Y + ++
Sbjct: 372 FIESMP---MKPTPSVWGALLGACRKYGNLKMG---REAAERLFEMEPYNPGNYVLLANM 425
Query: 478 LGRAGSLAEAIDL-----INSMTFEP 498
R+G L EA ++ +N + EP
Sbjct: 426 CTRSGRLEEANEVRRLMGVNGVRKEP 451
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 166/360 (46%), Gaps = 26/360 (7%)
Query: 14 TALIN--NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TAL++ C+ ++ A +F MP RN VS+ +MI GF ++ A ++ ++ R +
Sbjct: 49 TALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDV-LREKT 107
Query: 71 SVCSNALISGYLKVGRCEEAARI-FEAMVEKDVVAWG---------SMVDGYCKKGRVIE 120
+ + +S L C + F V VV +G S++D Y K E
Sbjct: 108 VIPNEVSVSSVLSA--CANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDE 165
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
++F + +++VV W +V G+++ D FE+ + F MRR G+ + + + + +
Sbjct: 166 GVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSAS 225
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+G +H + + G+ ++ + S+ITMY + G + +A +VF + + +SW ++
Sbjct: 226 LAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAM 285
Query: 241 ISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
IS Y +G + LFE M + V++ +++ S G +E+ + FN M + D
Sbjct: 286 ISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHD 345
Query: 297 VT----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+ A + + + + + FIE + ++P ++L A L G +
Sbjct: 346 MNPGPEHYACMVDLLGRAGWLDEAKRFIESM--PMKPTPSVWGALLGACRKYGNLKMGRE 403
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/518 (35%), Positives = 291/518 (56%), Gaps = 46/518 (8%)
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ N+V+W+A++ G+ + ++ +L M+ G N+ TL + AC R G +
Sbjct: 8 KPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKE 67
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+HG V+R GF + + N ++ +Y R M A K+FS S ++ VS+N++I GY NG
Sbjct: 68 IHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGN 127
Query: 250 IEEAYRLFERMP--GKDFVSWTTMITGFSSKGNLEKSIEL------FNMMPEKDDVTWTA 301
+E+A LF++M GKD +SW +MI+G++ NL K +L F+ + E+D TW
Sbjct: 128 VEKAKELFDQMELVGKDTISWNSMISGYAD--NLLKCEDLKAAQLAFDGVTERDTATWNV 185
Query: 302 IISGF-----------------------------------VNNEQYEEAFRWFIEMLRKD 326
+ISG+ V N E A R F EM
Sbjct: 186 LISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSS 245
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+RP+ T+ +L A A AT+ +G Q+HAH ++ E DV I +LV +Y+KCG++ A
Sbjct: 246 LRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAM 305
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+++ I N+VS N+M++ +A +G G+E + LFR M G P+ +TFLSVLS+C H G
Sbjct: 306 QVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAG 365
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
VE G +F M T YN+ P +HY C+VD+L RAG L EA +L+ + +P +WGAL
Sbjct: 366 AVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGAL 424
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
LG N++L ++AA+ L+ELEP++ YV+L++LY+ G+ D +R R K + +
Sbjct: 425 LGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMH 484
Query: 567 KSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
KSPGCSWI ++ +H+FL+ KS ++I TL ++
Sbjct: 485 KSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLN 522
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 160/317 (50%), Gaps = 18/317 (5%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL-KV 84
A +IF+ ++N VSY MI G+ G +A+EL+ M +D++ N++ISGY +
Sbjct: 100 ALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNL 159
Query: 85 GRCEE--AARI-FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP----EKNVVAWT 137
+CE+ AA++ F+ + E+D W ++ GY ++ + + KM E NV W
Sbjct: 160 LKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWN 219
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ G+++ E LF M+ + + T+ I+ AC R G QVH R
Sbjct: 220 GIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQ 279
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G++ D+ +G +++ MY + G + A +V++ +S + VS N++++ Y +G +E LF
Sbjct: 280 GYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALF 339
Query: 258 ERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVN 308
M G D V++ ++++ G +E E F++M +VT +T I+
Sbjct: 340 RNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYY-NVTPSLKHYTCIVDLLSR 398
Query: 309 NEQYEEAFRWFIEMLRK 325
+ +EA+ ++ RK
Sbjct: 399 AGRLDEAYELVKKIPRK 415
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 170/434 (39%), Gaps = 87/434 (20%)
Query: 25 EAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEEL--YVNMPARWRDSVCSNALI 78
EA E+ M NA + A+++ R +E+ YV + N L+
Sbjct: 29 EALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEIHGYVTRHGFMSNPFVVNGLV 88
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKNVVAW 136
Y + A +IF K+VV++ +M+ GYC+ G V +A+E+FD+M K+ ++W
Sbjct: 89 DVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISW 148
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+M+ GY D ++ +AF+ +T
Sbjct: 149 NSMISGY------ADNLLKCEDLKAAQLAFDGVT-------------------------- 176
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS----KRDAVSWNSLISGYVHNGEIEE 252
+ D N +I+ Y ++ + M + + +WN +ISG+V NG E
Sbjct: 177 ---ERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNEL 233
Query: 253 AYRLFERMP--------------------------GK-------------DFVSWTTMIT 273
A RLF M GK D ++
Sbjct: 234 ALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVD 293
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G+++ +++++N + + V+ A+++ + + +E F ML RP+ +T
Sbjct: 294 MYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVT 353
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
SVLS+ + G + + N+ + +V L S+ G + +AY + I
Sbjct: 354 FLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIP 413
Query: 394 ER-NIVSYNSMISG 406
+ + V + +++ G
Sbjct: 414 RKPDSVMWGALLGG 427
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 153/360 (42%), Gaps = 55/360 (15%)
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--------------------------GK 263
SK + VSW+++I G+ NG +EA L RM GK
Sbjct: 7 SKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGK 66
Query: 264 DFVSWTT-------------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+ + T ++ + ++ ++++F+ K+ V++ +I G+ N
Sbjct: 67 EIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENG 126
Query: 311 QYEEAFRWF--IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
E+A F +E++ KD ++ +S++S A + + E D +
Sbjct: 127 NVEKAKELFDQMELVGKDT----ISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTAT 182
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNID----ERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
N L+S Y+ C + + + + E N+ ++N +ISG +NG E AL LF +M+
Sbjct: 183 WNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQ 242
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
L P+ T +L AC + + G ++ S++ Y ++ A +VD+ + GS
Sbjct: 243 TSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIG--AALVDMYAKCGS 300
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM--ELEPDSATPYVVLS 541
+ A+ + N ++ P A+L A H + D ++++ PD T VLS
Sbjct: 301 IKHAMQVYNRIS-NPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLS 359
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 275/483 (56%), Gaps = 35/483 (7%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD P + + W +M+ Y + + + +++ M
Sbjct: 102 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM--------------------- 140
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
V + G + D+ +G ++ MY ++G + A +VF M KRD V+WN++
Sbjct: 141 -------------VEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 187
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+G + + A R+F++M +D VSW TM+ G++ G + +ELF+ M + +VTW
Sbjct: 188 IAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM-KLGNVTWN 246
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
II+ ++ N +EA F +M ++ PN +T SVL A+A A +G HA +++M
Sbjct: 247 VIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM 306
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
S+ + NSL+ +Y+KCG + + ++F +D ++ VS+N+M+SG+A +G G+ A+ LF
Sbjct: 307 GFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALF 366
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
M++ + + ++F+SVLSAC H GLVEEG F SM Y+I+P EHYACMVD+LGR
Sbjct: 367 SLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGR 426
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG E + I M EP GVWGALLG+ R H N+ L ++A HL++LEP + +VVL
Sbjct: 427 AGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVL 486
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S +Y+ G+ D + R K ++K+PGCSW+ LK+KVH F G KS L+ + +
Sbjct: 487 SSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLW 546
Query: 601 QTI 603
T+
Sbjct: 547 NTL 549
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 222/493 (45%), Gaps = 46/493 (9%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMRNAVSY-----AAMITGFVRRGMFYEAEELYVN 63
+N+MI A + EA E++ M + + A ++ + + G A E++
Sbjct: 117 WNSMIRAYTRSK-QYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDK 175
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
MP R D V NA+I+G + A R+F+ MV++D V+WG+M+ GY G +E E
Sbjct: 176 MPKR--DVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLE 233
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FDKM NV W ++ YM+ ++ F MR NS+T + A
Sbjct: 234 LFDKMKLGNVT-WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAA 292
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+REG+ H + + GF + ++GNS+I MY + G +D + K+F+ M +D VSWN+++SG
Sbjct: 293 FREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSG 352
Query: 244 YVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE----KD 295
Y +G + A LF M D VS+ ++++ G +E+ ++F+ M + K
Sbjct: 353 YAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKP 412
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
D+ A + + + FI+++ V P+ ++L + + + G
Sbjct: 413 DLEHYACMVDLLGRAGLFDETLGFIKVM--PVEPDAGVWGALLGSCRMHSNVKLGEVALD 470
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI--------VSYNSMISGF 407
H+VK+ + L S+Y++ G DA + + +++ + V + + F
Sbjct: 471 HLVKLEPRNPAHFV-VLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAF 529
Query: 408 AQNGLGEEAL--------NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
L L KM+ G VP++ L + + +E F+Y S +
Sbjct: 530 RVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEED-----KEMFLYSHSER 584
Query: 460 -----TLYNIEPG 467
L N PG
Sbjct: 585 LAITFALLNTPPG 597
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 136/314 (43%), Gaps = 43/314 (13%)
Query: 263 KDFVSWTTMITGFS--SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
K S T +I +S K +L +S+ F+ P + W ++I + ++QY EA +
Sbjct: 81 KHHHSITHLINLYSLFHKCDLARSV--FDSTPNPSRILWNSMIRAYTRSKQYNEALEMYY 138
Query: 321 EMLRK---------------------DVRP-----NQLTLSSVLSASAATATLNQGSQ-- 352
M+ K D++ +++ V++ +A A L+Q
Sbjct: 139 CMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPY 198
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+ V ++ D ++++ Y+ G V+ +F + N V++N +I+ + QNG
Sbjct: 199 VARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN-VTWNVIIAAYMQNGH 257
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK---SMKTLYNIEPGPE 469
+EA++ F +M+ E PN +TF+SVL A ++ EG + M L N G
Sbjct: 258 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS 317
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD--LAKLAAQHLM 527
++D+ + G L + L N M + W A+L H + D +A +
Sbjct: 318 ----LIDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVHGHGDRAIALFSLMQES 372
Query: 528 ELEPDSATPYVVLS 541
+++ DS + VLS
Sbjct: 373 QVQIDSVSFVSVLS 386
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 206/646 (31%), Positives = 327/646 (50%), Gaps = 49/646 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS-- 79
S+ A IF+ M R+AV+Y +I G + G +A EL+ M + SN L S
Sbjct: 321 SLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPD-SNTLASLV 379
Query: 80 ------GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
G L G+ A D + G++++ Y K + A F + +NV
Sbjct: 380 VACSSDGTLFSGQQLHAYTTKLGFASNDKIE-GALLNLYAKCSDIETALNYFLETEVENV 438
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V W M+ Y +D + F +F M+ + N T + + C R G Q+H
Sbjct: 439 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 498
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ + F + + + +I MY +LG +D A + + +D VSW ++I+GY ++A
Sbjct: 499 IIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 558
Query: 254 YRLFERMPGK----DFVSWT---------------------TMITGFSSK---------- 278
F +M + D V T ++GFSS
Sbjct: 559 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 618
Query: 279 ----GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
GN+E++ F D++ W A++SGF + EEA R F M R+ + N T
Sbjct: 619 YSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTF 678
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S + A++ TA + QG Q+HA + K +S+ + N+++S+Y+KCG++ DA + F +
Sbjct: 679 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSM 738
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+N VS+N+MI+ ++++G G EAL+ F +M + PN +T + VLSAC+H+GLV++G Y
Sbjct: 739 KNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEY 798
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F+SM T Y + P PEHY C+VD+L RAG L+ A D I M EP VW LL A H
Sbjct: 799 FESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHK 858
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
N+++ + AA HL+ELEP+ + YV+LS+LY+V K + R K K K ++K PG SWI
Sbjct: 859 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWI 918
Query: 575 ILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
+K+ +H F G ++ EI + ++K E + + +SLL
Sbjct: 919 EVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLL 964
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 221/478 (46%), Gaps = 58/478 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN-ALISGYLKV 84
A ++F MP R ++ MI R + + L+ M ++V N SG L+
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMV---NENVTPNEGTFSGVLEA 178
Query: 85 GRC---------EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
R + ARI + K + ++D Y + G V AR +FD + K+ +
Sbjct: 179 CRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSS 238
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W AM+ G K +C + LF M G+ + + AC + G Q+HGLV
Sbjct: 239 WVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 298
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ GF D + N+++++Y LG + A +FS MS+RDAV++N+LI+G G E+A
Sbjct: 299 KLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 358
Query: 256 LFERM--------------------------PGKDFVSWTTMITGFSSKGNLEKSIELFN 289
LF+RM G+ ++TT + GF+S +E + L N
Sbjct: 359 LFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKL-GFASNDKIEGA--LLN 415
Query: 290 MMPEKDD----------------VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+ + D V W ++ + + +FR F +M +++ PNQ T
Sbjct: 416 LYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 475
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
S+L L G QIH+ ++K + + + + + L+ +Y+K G + A+ I
Sbjct: 476 YPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 535
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+++VS+ +MI+G+ Q ++AL FR+M D G+ +++ + +SAC + ++EG
Sbjct: 536 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 593
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 220/489 (44%), Gaps = 54/489 (11%)
Query: 77 LISGYLKV-GRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
L+ G LK G +E ++ ++ + + ++D Y KG + A ++FD+MPE+
Sbjct: 73 LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPER 132
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYREGVQV 190
+ W M+ F LF M + N T + + EAC G + Q+
Sbjct: 133 TIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQI 192
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + G I+ N +I +Y R GF+D A +VF + +D SW ++ISG N
Sbjct: 193 HARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECE 252
Query: 251 EEAYRLF-------------------------ERMPGKDFVSWTTMITGFSSK------- 278
EA RLF E + + + + GFSS
Sbjct: 253 VEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 312
Query: 279 -------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
G+L + +F+ M ++D VT+ +I+G E+A F M + P+
Sbjct: 313 VSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDS 372
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
TL+S++ A ++ TL G Q+HA+ K+ S+ I+ +L++LY+KC ++ A F
Sbjct: 373 NTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLE 432
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ N+V +N M+ + + +FR+M+ E +VPNQ T+ S+L C +G +E G
Sbjct: 433 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 492
Query: 452 -FIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
I+ + +KT + + Y C ++D+ + G L A D++ + F V +
Sbjct: 493 EQIHSQIIKTSFQLNA----YVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMI 546
Query: 509 AGRTHLNLD 517
AG T N D
Sbjct: 547 AGYTQYNFD 555
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 178/377 (47%), Gaps = 45/377 (11%)
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF-EDGFDLFLSMRRGGMAFNSITLTILF 175
R ++ R + + + ++TA+ + + F E+G D S+ G+ N TL L
Sbjct: 18 RKLKTRTVLRTLCQIRRASFTAISVSISEDESFQENGID---SVENCGIRPNHQTLKWLL 74
Query: 176 EACGRFF-RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
E C + EG ++H + + GFD + L ++ Y G +D A KVF M +R
Sbjct: 75 EGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTI 134
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMP--------------------------------- 261
+WN +I + + LF RM
Sbjct: 135 FTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHA 194
Query: 262 -------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
GK + +I +S G ++++ +F+ + KD +W A+ISG NE E
Sbjct: 195 RIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVE 254
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A R F +M + P SSVLSA +L G Q+H V+K+ SD + N+LVS
Sbjct: 255 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 314
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
LY G+++ A IF+N+ +R+ V+YN++I+G +Q G GE+A+ LF++M+ +GL P+ T
Sbjct: 315 LYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNT 374
Query: 435 FLSVLSACNHVGLVEEG 451
S++ AC+ G + G
Sbjct: 375 LASLVVACSSDGTLFSG 391
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/599 (32%), Positives = 332/599 (55%), Gaps = 17/599 (2%)
Query: 21 CSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR----WRDSVCSN 75
C + E A ++F +M +N V++ +MI G+V+ G+ EA +++ +M R +V S
Sbjct: 230 CGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASF 289
Query: 76 ALISGYLKV---GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
S L G+ A I ++ + D + S+++ Y K G + +A +F +M EK+
Sbjct: 290 LSASANLDALIEGKQGHAIAILNSL-DLDNILGSSIINFYSKVGLIEDAELVFSRMLEKD 348
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VV W ++ Y++ ++ MR + F+S+TL+ + A + G + H
Sbjct: 349 VVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHC 408
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
R + D+++ NSII MY + +D+A KVF ++RD V WN+L++ Y G E
Sbjct: 409 YCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGE 468
Query: 253 AYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAIIS 304
A +LF +M + +SW ++I GF G + ++ ++F+ M + + +TWT +IS
Sbjct: 469 ALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLIS 528
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G + EA +F +M +RP+ +++SVL A +L G IH + +
Sbjct: 529 GLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCL 588
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
V + SLV +Y+KCG++ +A ++F + + + YN+MIS +A +G EAL LF+ ++
Sbjct: 589 SVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQ 648
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
EG+ P+ ITF S+LSAC+H GLV EG F M + +N+ P EHY C+V +L R G+L
Sbjct: 649 KEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNL 708
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA+ LI +M F+P + G+LL A R H ++L + ++HL +LEP ++ YV LS+ Y
Sbjct: 709 DEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAY 768
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ G+ + + +R K++ +RK+PGCSWI K+++F+AG S +EI L +
Sbjct: 769 AAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAML 827
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 262/541 (48%), Gaps = 36/541 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDS-VCSNALIS-GY 81
A +F + +RN S+AA++ R G +A ++ M + D+ V N L + G
Sbjct: 135 AVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGS 194
Query: 82 LKVGRCEEAAR--IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
L++ + + + V S+VD Y K G + +AR++FD M EKNVV W +M
Sbjct: 195 LQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSM 254
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ GY++ ++ D+F MR G+ +T+ A EG Q H +
Sbjct: 255 IVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSL 314
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D D ILG+SII Y ++G +++A VFS M ++D V+WN LIS YV + ++ +A +
Sbjct: 315 DLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHL 374
Query: 260 MPGK----DFVSWTTMITGFSSKGNLEKSIE----LFNMMPEKDDVTWTAIISGFVNNEQ 311
M + D V+ +++++ + N++ E E D V +II + E+
Sbjct: 375 MRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCER 434
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
++A + F +D+ + +++L+A A + ++ + ++ +V NS
Sbjct: 435 IDDARKVFDSTTERDL----VLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNS 490
Query: 372 LVSLYSKCGNVVDAYRIFTNID----ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
++ + + G V +A +F+ + + N++++ ++ISG AQ+G G EA+ F+KM++ G
Sbjct: 491 VILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAG 550
Query: 428 LVPNQITFLSVLSACNHV-----GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
+ P+ + SVL AC + G GFI T + +VD+ + G
Sbjct: 551 IRPSIASITSVLLACTDIPSLWYGRAIHGFI------TRHEFCLSVPVATSLVDMYAKCG 604
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVL 540
S+ EA + + M+ + P ++ A++ A H A +HL + +EPDS T +L
Sbjct: 605 SIDEAKKVFHMMSSKELP-IYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSIL 663
Query: 541 S 541
S
Sbjct: 664 S 664
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 166/338 (49%), Gaps = 16/338 (4%)
Query: 217 GFMDEANKVFSMMSKRD----AVSWNSLISGYVHNGEIEEAYRLFER-MPGKDFVSWT-- 269
G + E+ + S M D + L+ G V+ + ++ R + DF +
Sbjct: 58 GHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEY 117
Query: 270 --TMITGFSSKGNL-EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
T + F +K + E ++ LF+ + ++ +W AI+ E+A FIEM
Sbjct: 118 VETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENG 177
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
V P+ L +VL A + + G +H +V+KM + V + +SLV +Y KCG + DA
Sbjct: 178 VFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDAR 237
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
++F ++ E+N+V++NSMI G+ QNGL +EA+++F M+ EG+ P ++T S LSA ++
Sbjct: 238 KVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLD 297
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
+ EG ++ L +++ + +++ + G L E +L+ S E W L
Sbjct: 298 ALIEG-KQGHAIAILNSLDLDNILGSSIINFYSKVG-LIEDAELVFSRMLEKDVVTWNLL 355
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEP---DSATPYVVLS 541
+ + H + A L HLM E DS T +LS
Sbjct: 356 ISSYVQHHQVGKA-LNMCHLMRSENLRFDSVTLSSILS 392
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN- 361
IS + +E+ EM +D + +L L+ G QIHA ++K
Sbjct: 51 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 110
Query: 362 -MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ ++ LV Y+KC A R+F + RN+ S+ +++ + G E+AL F
Sbjct: 111 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGF 170
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC------M 474
+M++ G+ P+ +VL AC + L+ G K ++ AC +
Sbjct: 171 IEMQENGVFPDNFVLPNVLKACGSLQLIGLG-------KGVHGYVLKMGFGACVFVSSSL 223
Query: 475 VDILGRAGSLAEAIDLINSMT 495
VD+ G+ G L +A + +SM
Sbjct: 224 VDMYGKCGVLEDARKVFDSMV 244
>gi|125550574|gb|EAY96283.1| hypothetical protein OsI_18181 [Oryza sativa Indica Group]
Length = 661
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 311/557 (55%), Gaps = 13/557 (2%)
Query: 29 IFATMPMRN-AVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRC 87
+F MP R+ AV+YAAM+ + AE LY P R ++ GY+K G+
Sbjct: 80 MFDGMPRRDDAVAYAAMVGIHLWDRDLPHAEALYRAAPPDCRGIHLDTVMLDGYVKAGQV 139
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
+ A R+F+ M K+VVAW MV GYC+ G V EAR +FD MP +NV +WT MV GY
Sbjct: 140 DRARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLMPYRNVFSWTTMVQGYAHNG 199
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
+ ++F M N + T++ +A +E +++ + + + N
Sbjct: 200 MLREAREMFDKMPER----NVVAWTVMVKAYVDNGCIQEALELFNRMPQM----NSYSWN 251
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS 267
++ T G +D+A ++F M ++ VSW +++G NG + A F+RMP KD +
Sbjct: 252 AMATGLMSAGKVDDAVQLFDKMPHKNVVSWTIMVTGLAQNGFVSRAREFFDRMPKKDIPA 311
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
W +MIT +++ G + + LF++MP K+ VTW II G+ N +EA R F+ MLR V
Sbjct: 312 WNSMITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAV 371
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ TL SVL S +T + Q IH K+ + + ++ N+LVS+YS+ G++ A+
Sbjct: 372 SPDSTTLISVLVVSESTMEVRQ---IHGLSTKLGYQPETNLGNTLVSMYSRSGDLSSAWL 428
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
F ++E++ +++ SMI A +G AL F +M G P+ TF +VLSACNHVGL
Sbjct: 429 AFRRLNEKDAITWTSMIQALANHGCAPCALQGFAQMLRCGYKPSSTTFTAVLSACNHVGL 488
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE-PPPGVWGAL 506
VE+G FKS+ +Y +EP EHY+C+VD+LGRAG + EA ++++ M + + G L
Sbjct: 489 VEKGRKIFKSISHVYGLEPTIEHYSCLVDLLGRAGYVREAKEVVDGMQRDMCDEAILGTL 548
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
LG+ TH +++ + + L++++P + Y +L+++++ G + V K +++
Sbjct: 549 LGSCMTHNEVEVGRAVGEDLVKIDPSGSGGYTLLANVFASGGMWNEVASVWKIMKGSKVK 608
Query: 567 KSPGCSWIILKDKVHLF 583
K+PG S I + + H+F
Sbjct: 609 KTPGFSQIEVNARNHVF 625
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--- 67
T +++ C + EA +F MP RN S+ M+ G+ GM EA E++ MP R
Sbjct: 158 TCMVSGYCRAGLVDEARRLFDLMPYRNVFSWTTMVQGYAHNGMLREAREMFDKMPERNVV 217
Query: 68 --------WRDSVCS------------------NALISGYLKVGRCEEAARIFEAMVEKD 101
+ D+ C NA+ +G + G+ ++A ++F+ M K+
Sbjct: 218 AWTVMVKAYVDNGCIQEALELFNRMPQMNSYSWNAMATGLMSAGKVDDAVQLFDKMPHKN 277
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM---------------------- 139
VV+W MV G + G V ARE FD+MP+K++ AW +M
Sbjct: 278 VVSWTIMVTGLAQNGFVSRAREFFDRMPKKDIPAWNSMITAYTNDGQVNDAQRLFDIMPS 337
Query: 140 ---------VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
+DGY + ++ LFL M R ++ +S TL + R Q+
Sbjct: 338 KNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAVSPDSTTLISVLVVSESTMEVR---QI 394
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HGL ++ G+ + LGN++++MY R G + A F ++++DA++W S+I ++G
Sbjct: 395 HGLSTKLGYQPETNLGNTLVSMYSRSGDLSSAWLAFRRLNEKDAITWTSMIQALANHGCA 454
Query: 251 EEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELF 288
A + F +M + ++T +++ + G +EK ++F
Sbjct: 455 PCALQGFAQMLRCGYKPSSTTFTAVLSACNHVGLVEKGRKIF 496
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 203/649 (31%), Positives = 340/649 (52%), Gaps = 61/649 (9%)
Query: 30 FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGRC 87
F + ++ ++ +MI+ +VR G F EA + + + +++ + + LK +
Sbjct: 131 FDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPV---LKACQT 187
Query: 88 EEAAR-----IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
R +F+ + DV S++ Y + G V AR +FD MP +++ +W AM+ G
Sbjct: 188 LVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISG 247
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
++ D+ MR G+ +S+T+ + C + +H V + G +++
Sbjct: 248 LIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFE 307
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP- 261
+ + N++I MY + G + +A KVF M RD VSWNS+I+ Y N + A F +M
Sbjct: 308 LFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQL 367
Query: 262 ---GKDFVSWTTM---------------ITGF---------------------SSKGNLE 282
D ++ ++ + GF + G ++
Sbjct: 368 NGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVID 427
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-----KDVRPNQLTLSSV 337
+ ++FN++P KD V+W +ISG+ N EA IE+ R ++++ NQ T S+
Sbjct: 428 SAHKVFNLIPVKDVVSWNTLISGYTQNGLASEA----IEVYRMMEECREIKLNQGTWVSI 483
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L+A A L QG +IH H++K N+ DV + L+ LY KCG +VDA +F + +
Sbjct: 484 LAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESS 543
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
V +N++IS +G GE+AL LFR+M+DEG+ P+ +TF+S+LSAC+H GLV+EG +F
Sbjct: 544 VPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHL 603
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
M+ Y I+P +HY CMVD+LGRAG L A D I M P +WGALLGA R H N++
Sbjct: 604 MQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIE 662
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
L K A+ L E++ ++ YV+LS++Y+ +GK ++VR + + ++K+PG S I +
Sbjct: 663 LGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVN 722
Query: 578 DKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
+V +F G +S KEI L+ ++ K + P + + L +E D
Sbjct: 723 RRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEED 771
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 234/480 (48%), Gaps = 53/480 (11%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR-GGMAF 166
+V+ Y G V +R FD++ K+V W +M+ Y++ F + D F +
Sbjct: 114 LVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQA 173
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T + +AC +G ++H V + GF +D+ + S+I MY R GF+ A +F
Sbjct: 174 DFYTFPPVLKACQTLV---DGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLF 230
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE--RMPGKDFVSWTT-------------- 270
M RD SWN++ISG + NG +A + + R+ G + S T
Sbjct: 231 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDIS 290
Query: 271 -----------------------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
+I ++ GNL + ++F M +D V+W +II+ +
Sbjct: 291 TATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYE 350
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN--MESD 365
N+ A +F +M + P+ LTL S+ S +A + +H +++ ME+
Sbjct: 351 QNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEA- 409
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
V I N+++ +Y+K G + A+++F I +++VS+N++ISG+ QNGL EA+ ++R M++
Sbjct: 410 VVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEE 469
Query: 426 -EGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
+ NQ T++S+L+A HVG +++G I+ +KT N+ C++D+ G+ G
Sbjct: 470 CREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKT--NLHLDVFVGTCLIDLYGKCGR 527
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
L +A+ L + E W A++ H + + A + + + ++PD T +LS
Sbjct: 528 LVDAMCLFYQVPRESSVP-WNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLS 586
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 192/408 (47%), Gaps = 47/408 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLK 83
A +F MP R+ S+ AMI+G ++ G +A ++ M DSV +++ +
Sbjct: 226 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQ 285
Query: 84 VGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
+G A I ++ E ++ ++++ Y K G + +A+++F +M ++VV+W ++
Sbjct: 286 LGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSI 345
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ Y + D F M+ G+ + +TL L + Y+ VHG + R G+
Sbjct: 346 IAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGW 405
Query: 200 DYD-IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG---EIEEAYR 255
+ +++GN+++ MY +LG +D A+KVF+++ +D VSWN+LISGY NG E E YR
Sbjct: 406 LMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYR 465
Query: 256 LFE-----------------------------RMPGK--------DFVSWTTMITGFSSK 278
+ E R+ G D T +I +
Sbjct: 466 MMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKC 525
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G L ++ LF +P + V W AIIS + E+A + F EM + V+P+ +T S+L
Sbjct: 526 GRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLL 585
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
SA + + +++G + + ++ + +V L + G + AY
Sbjct: 586 SACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAY 633
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 147/309 (47%), Gaps = 40/309 (12%)
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
I LF++C + + ++H L+ G + ++ +Y LG + + F
Sbjct: 77 IDFNSLFDSCTKTLLAK---RLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQ 133
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------------------PGKD 264
+ ++D +WNS+IS YV NG EA F ++ G+
Sbjct: 134 IQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRK 193
Query: 265 FVSWT-------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
W ++I +S G + + LF+ MP +D +W A+ISG + N
Sbjct: 194 IHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGN 253
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
+A EM + + + +T++S+L A ++ + IH +V+K +E ++ + N+
Sbjct: 254 AAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNA 313
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
L+++Y+K GN+ DA ++F + R++VS+NS+I+ + QN A F KM+ GL P+
Sbjct: 314 LINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPD 373
Query: 432 QITFLSVLS 440
+T +S+ S
Sbjct: 374 LLTLVSLAS 382
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 143/295 (48%), Gaps = 19/295 (6%)
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+F+S ++ ++S G++ S F+ + KD TW ++IS +V N + EA F ++L
Sbjct: 108 NFIS-IRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLL 166
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
V Q + A TL G +IH V K+ + DV + SL+ +YS+ G V
Sbjct: 167 L--VTKFQADFYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVG 224
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A +F ++ R++ S+N+MISG QNG +AL++ +M+ EG+ + +T S+L C
Sbjct: 225 IARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCA 284
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEH----YACMVDILGRAGSLAEAIDLINSMTFEPP 499
+G + ++ LY I+ G E ++++ + G+L +A + M F
Sbjct: 285 QLGDISTA-----TLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQM-FLRD 338
Query: 500 PGVWGALLGAGRTHLNLDLAK--LAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
W +++ A + + A+ L LEPD T L L S+ + RD
Sbjct: 339 VVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLT----LVSLASIAAQSRD 389
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 14/249 (5%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN----ALI 78
I A ++F +P+++ VS+ +I+G+ + G+ EA E+Y M R+ + +++
Sbjct: 426 IDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVY-RMMEECREIKLNQGTWVSIL 484
Query: 79 SGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+ Y VG ++ RI +++ DV ++D Y K GR+++A +F ++P ++ V
Sbjct: 485 AAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSV 544
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W A++ + E LF M+ G+ + +T L AC EG L+
Sbjct: 545 PWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLM 604
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEIE-- 251
+G + ++ + GR GF++ A + + M DA W +L+ +G IE
Sbjct: 605 QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELG 664
Query: 252 --EAYRLFE 258
+ RLFE
Sbjct: 665 KFASDRLFE 673
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 208/636 (32%), Positives = 331/636 (52%), Gaps = 58/636 (9%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMP---MRNAVSYAAMITGFVRRGMFYEAEELYV 62
S YN++I+ L + + +A ++F TM R+ VS++AM+ + G +A +++V
Sbjct: 97 SVLYNSLIS-LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 63 NMP--ARWRDSVCSNALI-----SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
+ C A+I S ++ VGR + E DV S++D + K
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 116 GRVIE-AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
E A ++FDKM E NVV WT M+ M++ + FL M G + TL+ +
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL---GFMDEANKVFSMMSK 231
F AC G Q+H R G D+ S++ MY + G +D+ KVF M
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 232 RDAVSWNSLISGYVHNGEI-EEAYRLFERMPGKDFV--SWTTMITGFSSKGNL------- 281
+SW +LI+GY+ N + EA LF M + V + T + F + GNL
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 282 -------------------------------EKSIELFNMMPEKDDVTWTAIISGFVNNE 310
E + F + EK+ V++ + G N
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+E+AF+ E+ +++ + T +S+LS A ++ +G QIH+ VVK+ + + + N
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+S+YSKCG++ A R+F ++ RN++S+ SMI+GFA++G L F +M +EG+ P
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
N++T++++LSAC+HVGLV EG+ +F SM + I+P EHYACMVD+L RAG L +A +
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
IN+M F+ VW LGA R H N +L KLAA+ ++EL+P+ Y+ LS++Y+ GK
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKW 693
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ +R K K + + K GCSWI + DK+H F G
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVG 729
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 187/409 (45%), Gaps = 49/409 (11%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP---EKNVVAWTAMVDGYMKVD 147
AR+ E +E D V + S++ Y K G +A ++F+ M +++VV+W+AM+ Y
Sbjct: 86 ARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNG 145
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILG 206
D +F+ G+ N T + AC G G + + G F+ D+ +G
Sbjct: 146 RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205
Query: 207 NSIITMY--GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--- 261
S+I M+ G F + A KVF MS+ + V+W +I+ + G EA R F M
Sbjct: 206 CSLIDMFVKGENSF-ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG 264
Query: 262 -----------------------GKDFVSWTT--------------MITGFSSKGNLEKS 284
GK SW M S+ G+++
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDC 324
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEMLRK-DVRPNQLTLSSVLSASA 342
++F+ M + ++WTA+I+G++ N EA F EM+ + V PN T SS A
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ G Q+ K + S+ S+ NS++S++ K + DA R F ++ E+N+VSYN+
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ G +N E+A L ++ + L + TF S+LS +VG + +G
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 168/340 (49%), Gaps = 51/340 (15%)
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
L L R G +S+T + L ++C R +R G VH + F + D +L NS+I++Y
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYS 108
Query: 215 RLGFMDEANKVFSMM---SKRDAVSWNSLISGYVHNGEIEEAYRLF-------------- 257
+ G +A VF M KRD VSW+++++ Y +NG +A ++F
Sbjct: 109 KSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYC 168
Query: 258 -----ERMPGKDFVSWTTMITGFSSK----------------------GNLEKSIELFNM 290
DFV + GF K + E + ++F+
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M E + VTWT +I+ + EA R+F++M+ ++ TLSSV SA A L+ G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKC---GNVVDAYRIFTNIDERNIVSYNSMISGF 407
Q+H+ ++ + DV + SLV +Y+KC G+V D ++F +++ +++S+ ++I+G+
Sbjct: 289 KQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 408 AQN-GLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHV 445
+N L EA+NLF +M +G V PN TF S AC ++
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 281/480 (58%), Gaps = 6/480 (1%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACG 179
AR + PE + + +V GY + D + +F+ M R G F +S + + +A
Sbjct: 225 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAA 284
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F R G Q+H + G D + + ++I MYG G + A KVF M + + V+WN+
Sbjct: 285 NFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNA 344
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+++ ++ A +F++M ++ SW M+ G+ G LE + +F+ MP +DDV+W
Sbjct: 345 VVTACFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSW 404
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+ +I GF +N + E+F +F E+LR ++RPN+++L+ VLSA + + G +H V K
Sbjct: 405 STMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEK 464
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALN 418
VS+ N+L+ +YS+CGNV A +F + E R+IVS+ SMI+G A +G GEEA+
Sbjct: 465 SGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIR 524
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
+F +M + G++P++I+F+S+L AC+H GL++EG YF MK +Y+IEP EHY CMVD+
Sbjct: 525 IFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLY 584
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR+G L +A I M P VW LLGA +H N++LA+ Q L EL+P+++ V
Sbjct: 585 GRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 644
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
+LS++Y+ GK +D +R ++RI+K S + + ++ F A C KEI++
Sbjct: 645 LLSNVYATAGKWKDVASIRKSMIVQRIKKITAWSLVEVGKTMYKFTA----CEKKKEIDI 700
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 153/315 (48%), Gaps = 15/315 (4%)
Query: 57 AEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
A +++ MP + V NA+++ + A IF+ M+ ++ +W M+ GY K G
Sbjct: 327 ARKVFDEMPQP--NLVAWNAVVTACFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAG 384
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
+ A+ IF +MP ++ V+W+ M+ G+ F + F F + R M N ++LT +
Sbjct: 385 ELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLS 444
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS-MMSKRDAV 235
AC + + G +HG V + G+ + + + N++I MY R G + A VF M KR V
Sbjct: 445 ACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIV 504
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
SW S+I+G +G EEA R+F M D +S+ +++ S G +++ F+ M
Sbjct: 505 SWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKM 564
Query: 292 P-----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
E + ++ + + + ++A+ + +M + P + ++L A ++
Sbjct: 565 KRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQM---PIPPTAIVWRTLLGACSSHGN 621
Query: 347 LNQGSQIHAHVVKMN 361
+ Q+ + +++
Sbjct: 622 IELAEQVKQRLNELD 636
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 125/298 (41%), Gaps = 51/298 (17%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
++NA++TA N + A EIF M +RN S+ M+ G+++ G A+ ++ MP
Sbjct: 341 AWNAVVTACFRGN-DVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPH- 398
Query: 68 WRDSVCSNALISGYLKVG-------------RCE---------------------EAARI 93
RD V + +I G+ G R E E +
Sbjct: 399 -RDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKT 457
Query: 94 FEAMVEKDVVAW-----GSMVDGYCKKGRVIEAREIFDKMPEK-NVVAWTAMVDGYMKVD 147
VEK +W +++D Y + G V AR +F+ M EK ++V+WT+M+ G
Sbjct: 458 LHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHG 517
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG- 206
E+ +F M G+ + I+ L AC +EG G S+ Y I
Sbjct: 518 HGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEG---EGYFSKMKRVYHIEPAV 574
Query: 207 ---NSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
++ +YGR G + +A M A+ W +L+ +G IE A ++ +R+
Sbjct: 575 EHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRL 632
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 325/625 (52%), Gaps = 51/625 (8%)
Query: 14 TALINNNCSIY---EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------ 64
TALIN + EA +F +P+R V++ +ITG+ + G A EL+ M
Sbjct: 159 TALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVR 218
Query: 65 PARW-RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
P R+ S S G+L+ GR + + + E D ++D YCK R+ AR+
Sbjct: 219 PDRFVLASAVSACSALGFLEGGR-QIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARK 277
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD M +N+V+WT M+ GYM+ + +F +M + G + T + +CG
Sbjct: 278 LFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAA 337
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+G Q+H V + + D + N++I MY + + EA VF +++ DA+S+N++I G
Sbjct: 338 IWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEG 397
Query: 244 YVHNGEIEEAYRLFERM---------------------------------------PGKD 264
Y N ++ EA +F+RM D
Sbjct: 398 YSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLD 457
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+ + +I +S + + +FNM+ KD V W ++I G NEQ EEA + F ++L
Sbjct: 458 LYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLL 517
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ PN+ T ++++ ++ A++ G Q HA ++K +++D + N+L+ +Y+KCG + +
Sbjct: 518 SGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKE 577
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
+F + +++ +NSMI+ +AQ+G EEAL +FR M + + PN +TF+ VLSAC H
Sbjct: 578 GRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAH 637
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
G V EG +F SMK+ Y+IEPG EHYA +V++ GR+G L A + I M +P VW
Sbjct: 638 AGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWR 697
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
+LL A N ++ + AA+ + +P + PYV+LS++Y+ G D + +R +
Sbjct: 698 SLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSG 757
Query: 565 IRKSPGCSWIILKDKVHLFLA-GRK 588
K GCSWI + +VH F+ GR+
Sbjct: 758 TVKETGCSWIEVTKEVHTFIVRGRE 782
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 210/441 (47%), Gaps = 71/441 (16%)
Query: 39 VSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMV 98
V + + TG R A + R D +N L+ GY +GR +A +F+ M
Sbjct: 21 VLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMP 80
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+++V+WGS++ Y + GR DC LF++
Sbjct: 81 HRNLVSWGSVISMYTQHGR----------------------------DDC---AISLFVA 109
Query: 159 MRRGGMAF-NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
++ N L + AC + G QVHG+ + D ++ +G ++I +Y +LG
Sbjct: 110 FQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLG 169
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK-------- 263
MDEA VF + R V+WN++I+GY G A LF+RM P +
Sbjct: 170 CMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVS 229
Query: 264 -----DFVSWTTMITGFSSKGNLEKSI--------------------ELFNMMPEKDDVT 298
F+ I G++ + E +LF+ M ++ V+
Sbjct: 230 ACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVS 289
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WT +ISG++ N EA F M + +P+ +S+L++ + A + QG QIHAHV+
Sbjct: 290 WTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVI 349
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K ++E+D ++N+L+ +Y+KC ++ +A +F + E + +SYN+MI G+++N EA+N
Sbjct: 350 KADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVN 409
Query: 419 LFRKMKDEGLVPNQITFLSVL 439
+F++M+ L P+ +TF+S+L
Sbjct: 410 IFQRMRFFSLRPSLLTFVSLL 430
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 177/404 (43%), Gaps = 73/404 (18%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + G D+ L N ++ Y LG + +A +F M R+ VSW S+IS Y +G
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99
Query: 250 IEEAYRLF--------------------------------ERMPG--------KDFVSWT 269
+ A LF E++ G + T
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+I ++ G +++++ +F+ +P + VTW +I+G+ A F M + VRP
Sbjct: 160 ALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRP 219
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
++ L+S +SA +A L G QIH + + E+D S+ N L+ LY KC + A ++F
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLF 279
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
++ RN+VS+ +MISG+ QN EA+ +F M G P+ S+L++C + +
Sbjct: 280 DCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIW 339
Query: 450 EGF-IYFKSMK-----------TLYNIEPGPEH------------------YACMVDILG 479
+G I+ +K L ++ EH Y M++
Sbjct: 340 QGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYS 399
Query: 480 RAGSLAEAIDLINSMTF---EPPPGVWGALLGAGRTHLNLDLAK 520
+ LAEA+++ M F P + +LLG + L ++L+K
Sbjct: 400 KNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSK 443
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 208/694 (29%), Positives = 352/694 (50%), Gaps = 82/694 (11%)
Query: 20 NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS 79
N + +A ++F MP +N VS MI+G+V+ G EA +L+ M R +V LI
Sbjct: 65 NGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVER--TAVTWTILIG 122
Query: 80 GYLKVGRCEEAARIFEAM------------------------------VEKDVVAWG--- 106
GY ++ + +EA +F M V+ ++ G
Sbjct: 123 GYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDS 182
Query: 107 ------SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
++VD YCK R+ A ++F +MPE + V++ AM+ GY K E +LF+ M+
Sbjct: 183 RLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQ 242
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G+ T + A G Q+H V + F +++ + N+++ Y + +
Sbjct: 243 NSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVI 302
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------- 261
+A K+F M ++D VS+N +ISGY +G+ + A+ LF +
Sbjct: 303 DARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIAS 362
Query: 262 -------GKDFVSWTTMITG-------------FSSKGNLEKSIELFNMMPEKDDVTWTA 301
G+ + T + T ++ G E++ +F + + V WTA
Sbjct: 363 NTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTA 422
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+IS +V YEE + F +M + V +Q T +S+L ASA+ A+L+ G Q+H+ ++K
Sbjct: 423 MISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSG 482
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
S+V ++L+ +Y+KCG++ DA + F + +RNIVS+N+MIS +AQNG E L F+
Sbjct: 483 FMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFK 542
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
+M GL P+ ++FL VLSAC+H GLVEEG +F SM +Y ++P EHYA +VD+L R+
Sbjct: 543 EMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRS 602
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEP-DSATPYVVL 540
G EA L+ M +P +W ++L A R H N +LA+ AA L +E A PYV +
Sbjct: 603 GRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNM 662
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S++Y+ G+ + ++V + + ++K P SW+ +K + H+F A + ++EI +
Sbjct: 663 SNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKI 722
Query: 601 QTISKGTKEFDWPKHDWSLLGLERDWSYTADNIK 634
++K +E + K D S D + +++K
Sbjct: 723 DMLTKTMEELGY-KPDTSCALHNEDEKFKVESLK 755
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/526 (28%), Positives = 252/526 (47%), Gaps = 69/526 (13%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+ SN + +LK G +A ++FE M K+ V+ M+ GY K G + EAR++FD M
Sbjct: 51 DTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMV 110
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E+ V WT ++ GY +++ F++ F+LF+ M+R G + +T L C + Q
Sbjct: 111 ERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQ 170
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
V + + G+D +I+GN+++ Y + +D A ++F M + D+VS+N++I+GY +G
Sbjct: 171 VQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGL 230
Query: 250 IEEAYRLFERMP-------------------GKDFVSWTTMITGFSSKGNLEKSI----- 285
E+A LF M G D + I F K N ++
Sbjct: 231 DEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNA 290
Query: 286 ---------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+LF+ MPE+D V++ IISG+ + +++ AF F E+
Sbjct: 291 LLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRK 350
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
Q +++LS ++ T G QIHA + +S++ + NSLV +Y+KCG +A IFT
Sbjct: 351 QFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 410
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN------- 443
N+ R+ V + +MIS + Q G EE L LF KM+ ++ +Q TF S+L A
Sbjct: 411 NLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSL 470
Query: 444 ----HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
H +++ GF + N+ G + ++D+ + GS+ +A+ M P
Sbjct: 471 GKQLHSFIIKSGF--------MSNVFSG----SALLDVYAKCGSIKDAVQTFQEM---PD 515
Query: 500 PGV--WGALLG--AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
+ W A++ A L L L+PDS + VLS
Sbjct: 516 RNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 561
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 334/639 (52%), Gaps = 52/639 (8%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS-------GY 81
+F M +RN VS+ AMI+G+ G +++A EL+V M C L++ G
Sbjct: 211 LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGS 270
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
LK+G+ I VE D+ ++++ Y G + + ++F+ +P ++ W +M+
Sbjct: 271 LKLGKQIHQLAIKFEFVE-DLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMIS 329
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR-YREGVQVHGLVSRFGFD 200
Y C E+ DLF+ M+ G+ + T+ I+ C +G +H V + G
Sbjct: 330 AYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMR 389
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
D LGN++++MY L ++ K+F M D +SWN++I N +A LFERM
Sbjct: 390 IDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERM 449
Query: 261 PGKDFV--SWTTM-----------------ITGFSSKGNLE------------------- 282
+ S+T + I G+ K ++E
Sbjct: 450 RESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDE 509
Query: 283 -KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ +LF P++D ++W A+I+ +V N Q +A F M+ + PN +T+ +VLS+
Sbjct: 510 ATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNSVTIINVLSSF 568
Query: 342 AATATLNQGSQIHAHVVK--MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
ATL QG +HA+V + ++ D+S+ N+ +++Y++CG++ A IF + +RNI+S
Sbjct: 569 THLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIIS 628
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+N+MI+G+ NG G +A+ F +M ++G PN +TF+SVLSAC+H G +E G F SM
Sbjct: 629 WNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMV 688
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
+N+ P HY+C+VD+L R G + EA + I+SM EP VW ALL + R + + A
Sbjct: 689 QDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQA 748
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
K + L +LEP +A YV+LS++Y+ G + R+R K K +RK PG SWII+K++
Sbjct: 749 KTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQ 808
Query: 580 VHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDW 617
VH F AG +S +I L + +E + P W
Sbjct: 809 VHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDLRW 847
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 233/488 (47%), Gaps = 55/488 (11%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV ++VD YCK G V +AR +FD M +++VV W AMV GY+ C+E+ L M
Sbjct: 87 DVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMG 146
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFM 219
R + NS T+ L AC R G VHG R G FD + + ++I Y R M
Sbjct: 147 RENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD-M 205
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------------- 260
+F +M R+ VSWN++ISGY G+ +A LF +M
Sbjct: 206 RVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQAC 265
Query: 261 -------PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
GK D ++ +S+ G+LE S +LF +P +D W
Sbjct: 266 AELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWN 325
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT-LNQGSQIHAHVVK 359
++IS + +EEA FI M + V+ ++ T+ +LS A+ L +G +HAHV+K
Sbjct: 326 SMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIK 385
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
M D S+ N+L+S+Y++ V +IF + +I+S+N+MI A+N L +A L
Sbjct: 386 SGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACEL 445
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDIL 478
F +M++ + PN T +S+L+AC V ++ G I+ MK ++IE + D+
Sbjct: 446 FERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMK--HSIEINQPLRTALADMY 503
Query: 479 GRAGSLAEAIDLINSMTFEPPPG----VWGALLGAGRTHLNLDLAKLAAQHLM-ELEPDS 533
G A A DL FE P W A++ + + A L ++ E EP+S
Sbjct: 504 MNCGDEATARDL-----FEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEAEPNS 558
Query: 534 ATPYVVLS 541
T VLS
Sbjct: 559 VTIINVLS 566
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 151/597 (25%), Positives = 269/597 (45%), Gaps = 88/597 (14%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TA+++ C + +A +F M R+ V + AM+ G+V G + EA L M R+
Sbjct: 92 TAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMG---RE 148
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE------- 123
++ N+ L + CE A+ + G V GYC + + ++
Sbjct: 149 NLRPNSRTMVALLLA-CEGASEL----------RLGRGVHGYCLRNGMFDSNPHVATALI 197
Query: 124 -------------IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
+FD M +N+V+W AM+ GY V + +LF+ M + F+ +T
Sbjct: 198 GFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVT 257
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ + +AC + G Q+H L +F F D+ + N+++ MY G ++ ++++F +
Sbjct: 258 MLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVP 317
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMI-------TGF---- 275
RDA WNS+IS Y G EEA LF RM KD + M+ +G
Sbjct: 318 NRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGK 377
Query: 276 --------------SSKGN-----------LEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+S GN +E ++F+ M D ++W +I N
Sbjct: 378 SLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNT 437
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+A F M +++PN T+ S+L+A L+ G IH +V+K ++E + ++
Sbjct: 438 LRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRT 497
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L +Y CG+ A +F +R+++S+N+MI+ + +N +AL LF +M E P
Sbjct: 498 ALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEA-EP 556
Query: 431 NQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
N +T ++VLS+ H+ + +G ++ + +++ + + R GSL A +
Sbjct: 557 NSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAEN 616
Query: 490 LINSMTFEPPPGV--WGALL-GAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
+ ++ P + W A++ G G D A LA ++E P+ T VLS
Sbjct: 617 IFKTL---PKRNIISWNAMIAGYGMNGRGSD-AMLAFSQMLEDGFRPNGVTFVSVLS 669
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 174/371 (46%), Gaps = 42/371 (11%)
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
K+ K+ W +++ + + + M G+ N+ TL ++ +AC
Sbjct: 12 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H + D+ +G +++ Y + GF+++A VF MS RD V WN+++ GYV
Sbjct: 72 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131
Query: 247 NGEIEEAYRLFERMPGKDF---------------------------------------VS 267
G EEA L M ++
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 191
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T + GF + ++ LF++M ++ V+W A+ISG+ + Y +A F++ML +V
Sbjct: 192 VATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEV 251
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+ + +T+ + A A +L G QIH +K D+ I N+L+++YS G++ +++
Sbjct: 252 KFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQ 311
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F ++ R+ +NSMIS +A G EEA++LF +M+ EG+ ++ T + +LS C +
Sbjct: 312 LFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA- 370
Query: 448 VEEGFIYFKSM 458
G + KS+
Sbjct: 371 --SGLLKGKSL 379
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 220/673 (32%), Positives = 349/673 (51%), Gaps = 62/673 (9%)
Query: 10 NAMITALINNNCSIYEAFEIFATM--PMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
N++IT +N I AF IF +M R+ VSY+++I+ F +A E++ + +
Sbjct: 91 NSLITLYSKSNDPI-TAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQ 149
Query: 68 ---WRDSVCSNALI-----SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY---CKKG 116
+ + C A+I G+ K G C + + V ++D + C
Sbjct: 150 DGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLA 209
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILF 175
+ AR++FDKM EKNVV WT M+ + ++ DLFL M G + TLT L
Sbjct: 210 DLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLI 269
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
C G ++H V R G D+ +G S++ MY + G + EA KVF M + + +
Sbjct: 270 SVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVM 329
Query: 236 SWNSLISGYVHNGE--IEEAYRLFERM-----------------------PGKDF---VS 267
SW +L++GYV G EA R+F M P DF V
Sbjct: 330 SWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVH 389
Query: 268 WTTMITGFSS--------------KGNLEKSIELFNMMPEKDDVTWTAIISGFVN--NEQ 311
T+ G S+ G +E + + F+++ EK+ V+ T + V N
Sbjct: 390 GQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLN 449
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
E+ +E + V + T +S+LS +A T+ +G QIHA VVK+ +D+S+ N+
Sbjct: 450 SEQDLDREVEYVGSGV--SSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNA 507
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
L+S+YSKCGN A ++F ++++ N++++ S+I+GFA++G +AL LF M + G+ PN
Sbjct: 508 LISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPN 567
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
+T+++VLSAC+HVGL++E + +F SM+ + I P EHYACMVD+LGR+G L+EAI+ I
Sbjct: 568 DVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFI 627
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
NSM F+ VW LG+ R H N L + AA+ ++E EP Y++LS+LY+ G+
Sbjct: 628 NSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWE 687
Query: 552 DGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD 611
D +R K K+I K G SWI ++++VH F G ++I L ++ K
Sbjct: 688 DVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVG 747
Query: 612 W-PKHDWSLLGLE 623
+ P D+ L +E
Sbjct: 748 YVPNTDFVLHDVE 760
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 160/324 (49%), Gaps = 50/324 (15%)
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
IT ++L + C R G +H ++ D +L NS+IT+Y + A +F
Sbjct: 53 ITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQS 112
Query: 229 M--SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV-----SWTTMI--------- 272
M SKRD VS++S+IS + +N +A +F+++ +D V +T +I
Sbjct: 113 MENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF 172
Query: 273 ------------TGF------------------SSKGNLEKSIELFNMMPEKDDVTWTAI 302
TG+ S +LE + ++F+ M EK+ VTWT +
Sbjct: 173 KTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLM 232
Query: 303 ISGFVNNEQYEEAFRWFIEML-RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
I+ +EA F+EML P++ TL+ ++S A L+ G ++H+ V++
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSG 292
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG--EEALNL 419
+ D+ + SLV +Y+KCG V +A ++F + E N++S+ ++++G+ + G G EA+ +
Sbjct: 293 LVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRM 352
Query: 420 FRKMKDE-GLVPNQITFLSVLSAC 442
F M + G+ PN TF VL AC
Sbjct: 353 FSNMLLQGGVAPNCFTFSGVLKAC 376
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 198/438 (45%), Gaps = 82/438 (18%)
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM--VEKDVVAWGSMVDGYCKKGRVIE 120
N+P D++ N+LI+ Y K A IF++M ++DVV++ S++ + ++
Sbjct: 82 NLPL---DTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLK 138
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A E+FD++ + + G+ N T + AC +
Sbjct: 139 AVEMFDQL------------------------------LLQDGVYPNEYCFTAVIRACLK 168
Query: 181 FFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGR---LGFMDEANKVFSMMSKRDAVS 236
++ G+ + G V + G FD + +G +I M+ + L ++ A KVF M +++ V+
Sbjct: 169 GGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVT 228
Query: 237 WNSLISGYVHNGEIEEAYRLFERM-------P--------------------GKDFVSWT 269
W +I+ G +EA LF M P GK+ SW
Sbjct: 229 WTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWV 288
Query: 270 -------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV-NNEQYE-E 314
+++ ++ G ++++ ++F+ M E + ++WTA+++G+V YE E
Sbjct: 289 IRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYERE 348
Query: 315 AFRWFIEM-LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A R F M L+ V PN T S VL A A+ + G Q+H +K+ + + + N LV
Sbjct: 349 AMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLV 408
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
S+Y+K G + A + F + E+N+VS + ++ +L R+++ G +
Sbjct: 409 SVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSF 468
Query: 434 TFLSVLSACNHVGLVEEG 451
T+ S+LS +G + +G
Sbjct: 469 TYASLLSGAACIGTIGKG 486
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 22/258 (8%)
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMM--PEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
D + ++IT +S + + +F M ++D V++++IIS F NN +A F +
Sbjct: 86 DTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQ 145
Query: 322 MLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKC 379
+L +D V PN+ ++V+ A G + V+K +S V + L+ ++ K
Sbjct: 146 LLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKG 205
Query: 380 GNVVD---AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITF 435
++ D A ++F + E+N+V++ MI+ AQ G +EA++LF +M G VP++ T
Sbjct: 206 CSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTL 265
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYN--IEPGPEHYAC----MVDILGRAGSLAEAID 489
++S C + + G K L++ I G C +VD+ + G + EA
Sbjct: 266 TGLISVCAEIQFLSLG-------KELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARK 318
Query: 490 LINSMTFEPPPGVWGALL 507
+ + M E W AL+
Sbjct: 319 VFDGMR-EHNVMSWTALV 335
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 12/189 (6%)
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL-SASAATATLNQGSQIHAHVVKMNMES 364
F N +Q +A + N+L SS+L T + G +H + N+
Sbjct: 26 FNNPQQLHKAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPL 85
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNID--ERNIVSYNSMISGFAQNGLGEEALNLFRK 422
D + NSL++LYSK + + A+ IF +++ +R++VSY+S+IS FA N +A+ +F +
Sbjct: 86 DTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQ 145
Query: 423 -MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK-SMKTLY---NIEPGPEHYACMVDI 477
+ +G+ PN+ F +V+ AC G + G F +KT Y ++ G E ++D+
Sbjct: 146 LLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCE----LIDM 201
Query: 478 LGRAGSLAE 486
+ SLA+
Sbjct: 202 FVKGCSLAD 210
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 331/596 (55%), Gaps = 17/596 (2%)
Query: 21 CSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR----WRDSVCSN 75
C + E A ++F +M +N V++ +MI G+V+ G+ EA +++ +M R +V S
Sbjct: 1325 CGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASF 1384
Query: 76 ALISGYLKV---GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
S L G+ A I ++ + D + S+++ Y K G + +A +F +M EK+
Sbjct: 1385 LSASANLDALIEGKQGHAIAILNSL-DLDNILGSSIINFYSKVGLIEDAELVFSRMLEKD 1443
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VV W ++ Y++ ++ MR + F+S+TL+ + A + G + H
Sbjct: 1444 VVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHC 1503
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
R + D+++ NSII MY + +D+A KVF ++RD V WN+L++ Y G E
Sbjct: 1504 YCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGE 1563
Query: 253 AYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAIIS 304
A +LF +M + +SW ++I GF G + ++ ++F+ M + + +TWT +IS
Sbjct: 1564 ALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLIS 1623
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G + EA +F +M +RP+ +++SVL A +L G IH + +
Sbjct: 1624 GLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCL 1683
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
V + SLV +Y+KCG++ +A ++F + + + YN+MIS +A +G EAL LF+ ++
Sbjct: 1684 SVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQ 1743
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
EG+ P+ ITF S+LSAC+H GLV EG F M + +N+ P EHY C+V +L R G+L
Sbjct: 1744 KEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNL 1803
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA+ LI +M F+P + G+LL A R H ++L + ++HL +LEP ++ YV LS+ Y
Sbjct: 1804 DEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAY 1863
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
+ G+ + + +R K++ +RK+PGCSWI K+++F+AG S +EI L
Sbjct: 1864 AAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAML 1919
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 216/413 (52%), Gaps = 40/413 (9%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F ++ +NV +W A+V ++ ED F+ M+ G+ ++ L + +ACG
Sbjct: 1230 AVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGS 1289
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G VHG V + GF + + +S++ MYG+ G +++A KVF M +++ V+WNS+
Sbjct: 1290 LQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSM 1349
Query: 241 ISGYVHNGEIEEAYRLFERM--------------------------PGK----------- 263
I GYV NG +EA +F M GK
Sbjct: 1350 IVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSL 1409
Query: 264 --DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
D + +++I +S G +E + +F+ M EKD VTW +IS +V + Q +A
Sbjct: 1410 DLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHL 1469
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M +++R + +TLSS+LSASA T+ + G + H + ++ N+ESDV + NS++ +Y+KC
Sbjct: 1470 MRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCER 1529
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ DA ++F + ER++V +N++++ +AQ GL EAL LF +M+ + + PN I++ SV+
Sbjct: 1530 IDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILG 1589
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
G V E F M++L +P + ++ L ++G EAI M
Sbjct: 1590 FLRNGQVNEAKDMFSQMQSL-GFQPNLITWTTLISGLAQSGFGYEAILFFQKM 1641
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 227/454 (50%), Gaps = 30/454 (6%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
S+VD Y K G + +AR++FD M EKNVV W +M+ GY++ ++ D+F MR G+
Sbjct: 1317 SLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEP 1376
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+T+ A EG Q H + D D ILG+SII Y ++G +++A VF
Sbjct: 1377 TRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVF 1436
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLE 282
S M ++D V+WN LIS YV + ++ +A + M + D V+ +++++ + N++
Sbjct: 1437 SRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIK 1496
Query: 283 KSIE----LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
E E D V +II + E+ ++A + F +D+ + +++L
Sbjct: 1497 LGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDL----VLWNTLL 1552
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID----E 394
+A A + ++ + ++ +V NS++ + + G V +A +F+ + +
Sbjct: 1553 AAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQ 1612
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV-----GLVE 449
N++++ ++ISG AQ+G G EA+ F+KM++ G+ P+ + SVL AC + G
Sbjct: 1613 PNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAI 1672
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
GFI T + +VD+ + GS+ EA + + M+ + P ++ A++ A
Sbjct: 1673 HGFI------TRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELP-IYNAMISA 1725
Query: 510 GRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
H A +HL + +EPDS T +LS
Sbjct: 1726 YALHGQAVEALALFKHLQKEGIEPDSITFTSILS 1759
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 166/338 (49%), Gaps = 16/338 (4%)
Query: 217 GFMDEANKVFSMMSKRD----AVSWNSLISGYVHNGEIEEAYRLFER-MPGKDFVSWT-- 269
G + E+ + S M D + L+ G V+ + ++ R + DF +
Sbjct: 1153 GHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEY 1212
Query: 270 --TMITGFSSKGNL-EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
T + F +K + E ++ LF+ + ++ +W AI+ E+A FIEM
Sbjct: 1213 VETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENG 1272
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
V P+ L +VL A + + G +H +V+KM + V + +SLV +Y KCG + DA
Sbjct: 1273 VFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDAR 1332
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
++F ++ E+N+V++NSMI G+ QNGL +EA+++F M+ EG+ P ++T S LSA ++
Sbjct: 1333 KVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLD 1392
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
+ EG ++ L +++ + +++ + G L E +L+ S E W L
Sbjct: 1393 ALIEG-KQGHAIAILNSLDLDNILGSSIINFYSKVG-LIEDAELVFSRMLEKDVVTWNLL 1450
Query: 507 LGAGRTHLNLDLAKLAAQHLME---LEPDSATPYVVLS 541
+ + H + A L HLM L DS T +LS
Sbjct: 1451 ISSYVQHHQVGKA-LNMCHLMRSENLRFDSVTLSSILS 1487
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 191/411 (46%), Gaps = 54/411 (13%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFG--FDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
L + C G Q+H + + G F + + ++ Y + F + A ++F +
Sbjct: 1180 LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRV 1239
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMP--------------------------GKD- 264
R+ SW +++ G E+A F M GK
Sbjct: 1240 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGV 1299
Query: 265 -------------FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
FVS ++++ + G LE + ++F+ M EK+ VTW ++I G+V N
Sbjct: 1300 HGYVLKMGFGACVFVS-SSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGL 1358
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
+EA F +M + + P ++T++S LSASA L +G Q HA + +++ D + +S
Sbjct: 1359 NQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSS 1418
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+++ YSK G + DA +F+ + E+++V++N +IS + Q+ +ALN+ M+ E L +
Sbjct: 1419 IINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFD 1478
Query: 432 QITFLSVLSA---CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
+T S+LSA +++ L +EG Y N+E ++D+ + + +A
Sbjct: 1479 SVTLSSILSASAVTSNIKLGKEGHCYCIRR----NLESDVVVANSIIDMYAKCERIDDAR 1534
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
+ +S T E +W LL A + + L+ A + +++ DS P V+
Sbjct: 1535 KVFDSTT-ERDLVLWNTLLAA---YAQVGLSGEALKLFYQMQFDSVPPNVI 1581
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN- 361
IS + +E+ EM +D + +L L+ G QIHA ++K
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 1205
Query: 362 -MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ ++ LV Y+KC A R+F + RN+ S+ +++ + G E+AL F
Sbjct: 1206 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGF 1265
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC------M 474
+M++ G+ P+ +VL AC + L+ G K ++ AC +
Sbjct: 1266 IEMQENGVFPDNFVLPNVLKACGSLQLIGLG-------KGVHGYVLKMGFGACVFVSSSL 1318
Query: 475 VDILGRAGSLAEAIDLINSMT 495
VD+ G+ G L +A + +SM
Sbjct: 1319 VDMYGKCGVLEDARKVFDSMV 1339
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 180/513 (35%), Positives = 295/513 (57%), Gaps = 9/513 (1%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
R++FD+M ++NVV + M+ Y+ ++DG +F M GG ++ T + +AC
Sbjct: 72 TRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSC 131
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
R G+ +HG V + G D+++ +GN +I MYG+ G + EA +VF M +D VSWNS+
Sbjct: 132 SENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSM 191
Query: 241 ISGYVHNGEIEEAYRLFERMP-------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
++GY HN ++A + M G S + SS+ N+ ++F +
Sbjct: 192 VAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSE-NVLYVEKIFVNLER 250
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
K+ ++W +I ++ N +A +++M + V P+ +T +SVL A + L G +I
Sbjct: 251 KNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRI 310
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H +V K + ++ ++NSL+ +Y++CG + DA R+F + R++ S+ S+IS + G G
Sbjct: 311 HEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQG 370
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
A+ LF +M + G P+ I F+++LSAC+H GL++EG IYFK M Y I P EHYAC
Sbjct: 371 CNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYAC 430
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDS 533
+VD+LGRAG + EA ++I M EP VW LL + R N+D+ LAA +L++L P+
Sbjct: 431 LVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQ 490
Query: 534 ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDL 593
+ YV+LS++Y+ G+ ++ +R K K+IRK+PG S + L ++VH FLAG S
Sbjct: 491 SGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQS 550
Query: 594 KEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
KEI L + KE + P+ D +L +E +
Sbjct: 551 KEIYEELGVLVAKMKELGYVPETDSALHDVEEE 583
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 204/501 (40%), Gaps = 79/501 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMP---------MRNAVSYAAMITGFVRR 51
M+DR YN MI + +NN+ + +F M V A + +R
Sbjct: 79 MSDRNVVFYNVMIRSYVNNH-RYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRY 137
Query: 52 GMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
G+ + L V + + N LI+ Y K G EA R+F+ M+ KDVV+W SMV G
Sbjct: 138 GLLIHGDVLKVGLDF---NLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAG 194
Query: 112 YCKKGRVIEARE-------------------------------------IFDKMPEKNVV 134
Y R +A E IF + KN++
Sbjct: 195 YAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLI 254
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W M+ YMK DL+L M + + ++IT + ACG G ++H V
Sbjct: 255 SWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYV 314
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ +++L NS+I MY R G +D+A +VF M RD SW SLIS Y G+ A
Sbjct: 315 EKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAV 374
Query: 255 RLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISG 305
LF M D +++ +++ S G L++ F M + +T + ++
Sbjct: 375 ALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDL 434
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+ +EA+ +M + PN+ +++LS+ ++ G +++++ E
Sbjct: 435 LGRAGRVDEAYNIIKQM---PIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQS 491
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI--------VSYNSMISGF--------AQ 409
L ++Y+K G + I + + + I V N+ + F
Sbjct: 492 -GYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQS 550
Query: 410 NGLGEEALNLFRKMKDEGLVP 430
+ EE L KMK+ G VP
Sbjct: 551 KEIYEELGVLVAKMKELGYVP 571
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 109/250 (43%), Gaps = 21/250 (8%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L+ L + TL ++H + +N + S+ L+ Y+ CG ++F +
Sbjct: 24 LAKALDQNPDIKTL---KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMS 80
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLV 448
+RN+V YN MI + N ++ L +FR+M + G P+ T+ VL AC+ GL+
Sbjct: 81 DRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLL 140
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
G + + +N+ G ++ + G+ G L EA + + M ++ W +++
Sbjct: 141 IHGDVLKVGLD--FNLFVGNG----LIAMYGKCGCLFEARRVFDEMIWKDVVS-WNSMVA 193
Query: 509 AGRTHLNLDLAKLAAQHLMEL--EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
++ D A + + + +PD T ++ L + N + ++K +
Sbjct: 194 GYAHNMRFDDALEICREMEDYGQKPDGCT----MASLMPAVANTSSENVLYVEKIFVNLE 249
Query: 567 KSPGCSWIIL 576
+ SW ++
Sbjct: 250 RKNLISWNVM 259
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 192/529 (36%), Positives = 302/529 (57%), Gaps = 11/529 (2%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD---GYCK----KGRVIEARE 123
++ +N ++S K E +I M++ +++ V +C G + A
Sbjct: 3 AISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASS 62
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI--LFEACGRF 181
+F ++ N + A++ G+ + L+ M + + +I + +ACG+
Sbjct: 63 VFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKL 122
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+ EG QVHG V + +D +GNS++ MY G ++ A +VF M RD VSWNS+I
Sbjct: 123 LAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMI 182
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
+GY+ GEIE A LF+ MP +D VS MI G+ G E + ++F M +KD VTWT+
Sbjct: 183 AGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTS 242
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+IS +V N +A F EML +RP+ + SVLSA A + +G +HA+V
Sbjct: 243 MISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNK 302
Query: 362 ME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER-NIVSYNSMISGFAQNGLGEEALNL 419
+E S I ++L+ +YSKCG + +AY +F +I R NI +NSMISG A +GL EAL++
Sbjct: 303 IELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDI 362
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F +M+ + PN+ITFL +LS C+H GLVEEG YF+SM Y I P +HY CM+D+ G
Sbjct: 363 FVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFG 422
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L +A+ +I +M FE W A+L A H ++++ K AA +EL PD ++ YV+
Sbjct: 423 RAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVL 482
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
LS++Y+ G+ D ++R+ + + ++K GCS +++ KVH FL G++
Sbjct: 483 LSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVBGKVHEFLXGKE 531
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 174/366 (47%), Gaps = 17/366 (4%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV 102
+M+ ++ G A ++ MP R D V N++I+GYLK G E A+ +F+ M E+D+
Sbjct: 149 SMVRMYIDFGEIELARRVFDRMPNR--DVVSWNSMIAGYLKAGEIELASELFDEMPERDL 206
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
V+ +M+DGY K GR A ++F+ M +K+VV WT+M+ Y++ C DLF M
Sbjct: 207 VSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSL 266
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI-ILGNSIITMYGRLGFMDE 221
G+ + + + A EG +H VS + +G+++I MY + G+++
Sbjct: 267 GLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIEN 326
Query: 222 ANKVF-SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFS 276
A VF S+ +R+ WNS+ISG +G EA +F M D +++ +++ S
Sbjct: 327 AYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCS 386
Query: 277 SKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
G +E+ F M EK + + +I F + E+A M +
Sbjct: 387 HGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNM---PFEADL 443
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
L ++LSAS + G +++ + D S L ++Y+K G D +I
Sbjct: 444 LAWKAILSASMKHGHIEIGKSAALRAIELAPD-DSSSYVLLSNIYAKAGRWDDVAKIRLM 502
Query: 392 IDERNI 397
+ +R +
Sbjct: 503 MRQRGV 508
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 128/330 (38%), Gaps = 53/330 (16%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM---------PMRNAVSYAAMITGFVRR 51
M+D+ ++ +MI+A + N C + +A ++F M P +V A GFV
Sbjct: 232 MSDKDVVTWTSMISAYVQNRCPM-KALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEE 290
Query: 52 GMFYEAEELYVNM-PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVE-KDVVAWGSMV 109
G + A YV+M +ALI Y K G E A +F ++ +++ W SM+
Sbjct: 291 GKWLHA---YVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMI 347
Query: 110 DGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI 169
G G EA D+F+ M R + N I
Sbjct: 348 SGLAIHGLAREA-------------------------------LDIFVEMERMDIEPNEI 376
Query: 170 TLTILFEACGRFFRYREG-VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
T L C EG + ++ I +I ++GR G +++A V
Sbjct: 377 TFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQN 436
Query: 229 MS-KRDAVSWNSLISGYVHNGEIE----EAYRLFERMPGKDFVSWTTMITGFSSKGNLEK 283
M + D ++W +++S + +G IE A R E P D S+ + ++ G +
Sbjct: 437 MPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAP-DDSSSYVLLSNIYAKAGRWDD 495
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
++ MM ++ S VB + +E
Sbjct: 496 VAKIRLMMRQRGVKKIAGCSSMLVBGKVHE 525
>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
Length = 826
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 200/598 (33%), Positives = 329/598 (55%), Gaps = 21/598 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVC--SNA 76
+A ++F +P RN V++ A++ G+V+ GM EA L +M P R S C ++A
Sbjct: 224 DARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASA 283
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+ G ++ G+ A I + E D + S ++ YCK G + A IFD+M EK+VV W
Sbjct: 284 NMDG-IEEGKQSHAIAIVNGL-ELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDVVTW 341
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
++ GY++ ED + MR + ++ +TL+ L A R + G +V R
Sbjct: 342 NLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIR 401
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
F DI+L ++ + MY G + +A KVF + +D + WN+L+S Y +G EA+RL
Sbjct: 402 HSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEAFRL 461
Query: 257 F-----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFV 307
F E +P + ++W +I F G + ++ E+F+ M + V+WT +++G V
Sbjct: 462 FYEMQLESVP-PNAITWNLIILSFLRNGQVNEAKEIFSQMQSSGIFPNLVSWTTMMNGLV 520
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDV 366
N EEA + +M +RPN +++ LSA + A+L+ G +H ++++ S V
Sbjct: 521 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRNQQHSSSV 580
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
I+ SLV +Y+KCG++ A +F + ++ YN+MIS +A NG +EA+ L R+++D
Sbjct: 581 LIETSLVDMYAKCGDINKAEMVFRSKLCSDLPLYNAMISAYALNGNVKEAIALCRRLEDT 640
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G+ P+ ITF S+LSACNH G V + F M + + I+P EHY MVDIL AG +
Sbjct: 641 GIKPDNITFTSLLSACNHAGDVSQAVEIFTDMVSKHGIKPCLEHYGLMVDILASAGETDK 700
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A+ LI M ++ + +L+ + +L ++HL+E EP+++ YV +S+ Y+V
Sbjct: 701 ALRLIEEMPYKSDARMIQSLVASCNMKHKTELMDFLSRHLLETEPENSGNYVTISNAYAV 760
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
G + + R K KR++KSPGCSWI +K VH+F+A K+ L KEI L ++
Sbjct: 761 EGSWDEVVKTREMMKAKRLKKSPGCSWIRIKGGVHVFVANDKTHLRNKEIRSILALLA 818
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 254/533 (47%), Gaps = 72/533 (13%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+SASY +++L + + I EA + M R + I G + +G YE
Sbjct: 32 SSASYFHRVSSL-SKSGEIREALSLLTEMDFRK-LRIGPEIYGEILQGCVYE-------- 81
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEA---MVEKDVVAWGSMVDGYCKKGRVIEA 121
RD + + LK G F A +E +V + + D + EA
Sbjct: 82 ----RDLCTGKQIHARILKNGD-------FYAKNEYIETKLVIFYAKCDAF-------EA 123
Query: 122 REI-FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
E+ F K+ +NV +W A++ ++ E+ F+ M + + ++ + + +ACG
Sbjct: 124 SEVLFSKLRVRNVYSWAAIIGVKCRIGLCEEALMGFVEMLQNEIFPDNFVVPNVCKACGA 183
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
R G VHG V + G + + +S+ MYG+ G +D+A KVF + +R+ V+WN+L
Sbjct: 184 LQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNAL 243
Query: 241 ISGYVHNGEIEEAYRLFERM--------------------------PGK----------- 263
+ GYV NG EEA RL M GK
Sbjct: 244 MVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGL 303
Query: 264 --DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
D + T+ + + G +E + +F+ M EKD VTW +ISG+V E+A
Sbjct: 304 ELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQL 363
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M ++++ + +TLS+++SA+A T L G ++ + ++ + SD+ + ++ V +Y+ CG+
Sbjct: 364 MRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGS 423
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
++DA ++F ++ ++++ +N+++S +A++GL EA LF +M+ E + PN IT+ ++ +
Sbjct: 424 IIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILS 483
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
G V E F M++ I P + M++ L + G EAI + M
Sbjct: 484 FLRNGQVNEAKEIFSQMQS-SGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKM 535
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 192/629 (30%), Positives = 339/629 (53%), Gaps = 59/629 (9%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
N I ++ S+ +A E+F MP RN VSY ++ITG+ + G EA LY+ M
Sbjct: 105 NNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL 164
Query: 65 -PARWR-DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
P ++ S+ S + +G+ + A++ + ++A +++ Y + ++ +A
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGK-QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDAS 223
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL-FLSMRRGGMAF-----NSITLTILFE 176
+F +P K++++W++++ G+ ++ GF+ LS + ++F N +
Sbjct: 224 RVFYGIPMKDLISWSSIIAGFSQL-----GFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
AC R G Q+HGL + + I G S+ MY R GF++ A +VF + + D S
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGNLEKSIEL----- 287
WN +I+G +NG +EA +F +M F+ S +++ + L + +++
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 288 ---------------------------FNMMPE----KDDVTWTAIISGFVNNEQYEEAF 316
FN+ + D V+W I++ + +EQ E
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
R F ML + P+ +T+ ++L ++L GSQ+H + +K + + I+N L+ +Y
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+KCG++ A RIF ++D R++VS++++I G+AQ+G GEEAL LF++MK G+ PN +TF+
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
VL+AC+HVGLVEEG + +M+T + I P EH +C+VD+L RAG L EA I+ M
Sbjct: 579 GVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
EP VW LL A +T N+ LA+ AA+++++++P ++T +V+L +++ G + +
Sbjct: 639 EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALL 698
Query: 557 RMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
R K ++K PG SWI ++DK+H+F A
Sbjct: 699 RSSMKKHDVKKIPGQSWIEIEDKIHIFFA 727
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 209/448 (46%), Gaps = 50/448 (11%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
I + + D + ++ Y K G + +ARE+FD MPE+N+V++T+++ GY + +
Sbjct: 92 HILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAE 151
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
L+L M + + + + +AC G Q+H V + +I N++I
Sbjct: 152 AIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIA 211
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG-EIEEAYRLFERMPGKDF----- 265
MY R M +A++VF + +D +SW+S+I+G+ G E E L E + F
Sbjct: 212 MYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 271
Query: 266 ----------------------------------VSWTTMITGFSSKGNLEKSIELFNMM 291
++ ++ ++ G L + +F+ +
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
D +W II+G NN +EA F +M P+ ++L S+L A L+QG
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQN 410
QIH++++K +D+++ NSL+++Y+ C ++ + +F + + + VS+N++++ Q+
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG--P 468
E L LF+ M P+ IT ++L C VE + S Y+++ G P
Sbjct: 452 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGC-----VEISSLKLGSQVHCYSLKTGLAP 506
Query: 469 EHYA--CMVDILGRAGSLAEAIDLINSM 494
E + ++D+ + GSL +A + +SM
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 153/312 (49%), Gaps = 40/312 (12%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T L AC +G ++H + YD IL N I++MYG+ G + +A +VF M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGN----- 280
+R+ VS+ S+I+GY NG+ EA RL+ +M +D V ++ ++I +S +
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 281 --------LEKSIEL------------FNMM----------PEKDDVTWTAIISGFVNNE 310
LE S L FN M P KD ++W++II+GF
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 311 QYEEAFRWFIEMLRKDV-RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
EA EML V PN+ S L A ++ + GSQIH +K + +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
SL +Y++CG + A R+F I+ + S+N +I+G A NG +EA+++F +M+ G +
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 430 PNQITFLSVLSA 441
P+ I+ S+L A
Sbjct: 369 PDAISLRSLLCA 380
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 75/110 (68%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S++ A +++ +L QG +IH H++ N + D + N ++S+Y KCG++ DA +F +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
ERN+VSY S+I+G++QNG G EA+ L+ KM E LVP+Q F S++ AC
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 208/636 (32%), Positives = 330/636 (51%), Gaps = 58/636 (9%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATM---PMRNAVSYAAMITGFVRRGMFYEAEELYV 62
S YN++I+ L + + +A ++F TM R+ VS++AM+ + G +A +++V
Sbjct: 97 SVLYNSLIS-LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 63 NMP--ARWRDSVCSNALI-----SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
+ C A+I S ++ VGR + E DV S++D + K
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 116 GRVIE-AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
E A ++FDKM E NVV WT M+ M++ + FL M G + TL+ +
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL---GFMDEANKVFSMMSK 231
F AC G Q+H R G D+ S++ MY + G +D+ KVF M
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 232 RDAVSWNSLISGYVHNGEI-EEAYRLFERMPGKDFVSWT--TMITGFSSKGNL------- 281
+SW +LI+GY+ N + EA LF M + V T + F + GNL
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 282 -------------------------------EKSIELFNMMPEKDDVTWTAIISGFVNNE 310
E + F + EK+ V++ + G N
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+E+AF+ E+ +++ + T +S+LS A ++ +G QIH+ VVK+ + + + N
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+S+YSKCG++ A R+F ++ RN++S+ SMI+GFA++G L F +M +EG+ P
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
N++T++++LSAC+HVGLV EG+ +F SM + I+P EHYACMVD+L RAG L +A +
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
IN+M F+ VW LGA R H N +L KLAA+ ++EL+P+ Y+ LS++Y+ GK
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKW 693
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ +R K K + + K GCSWI + DK+H F G
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVG 729
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 187/409 (45%), Gaps = 49/409 (11%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM---PEKNVVAWTAMVDGYMKVD 147
AR+ E +E D V + S++ Y K G +A ++F+ M +++VV+W+AM+ Y
Sbjct: 86 ARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNG 145
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILG 206
D +F+ G+ N T + AC G G + + G F+ D+ +G
Sbjct: 146 RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205
Query: 207 NSIITMY--GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--- 261
S+I M+ G F + A KVF MS+ + V+W +I+ + G EA R F M
Sbjct: 206 CSLIDMFVKGENSF-ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG 264
Query: 262 -----------------------GKDFVSWTT--------------MITGFSSKGNLEKS 284
GK SW M S+ G+++
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDC 324
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEMLRK-DVRPNQLTLSSVLSASA 342
++F+ M + ++WTA+I+G++ N EA F EM+ + V PN T SS A
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ G Q+ K + S+ S+ NS++S++ K + DA R F ++ E+N+VSYN+
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ G +N E+A L ++ + L + TF S+LS +VG + +G
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 168/340 (49%), Gaps = 51/340 (15%)
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
L L R G +S+T + L ++C R +R G VH + F + D +L NS+I++Y
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYS 108
Query: 215 RLGFMDEANKVFSMM---SKRDAVSWNSLISGYVHNGEIEEAYRLF-------------- 257
+ G +A VF M KRD VSW+++++ Y +NG +A ++F
Sbjct: 109 KSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYC 168
Query: 258 -----ERMPGKDFVSWTTMITGFSSK----------------------GNLEKSIELFNM 290
DFV + GF K + E + ++F+
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M E + VTWT +I+ + EA R+F++M+ ++ TLSSV SA A L+ G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKC---GNVVDAYRIFTNIDERNIVSYNSMISGF 407
Q+H+ ++ + DV + SLV +Y+KC G+V D ++F +++ +++S+ ++I+G+
Sbjct: 289 KQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 408 AQN-GLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHV 445
+N L EA+NLF +M +G V PN TF S AC ++
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 204/613 (33%), Positives = 319/613 (52%), Gaps = 53/613 (8%)
Query: 26 AFEIFATMPMR--NAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNAL 77
A +F MP R N V + +I + G + EA +LY M P R+ A
Sbjct: 70 ARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKAC 129
Query: 78 IS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+ GR E I +E +V ++VD Y K G + +A+E+FDKM +++VVAW
Sbjct: 130 SALKEASEGR-EIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAW 188
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+M+ G+ + D L + ++ NS T+ + A + R G ++HG R
Sbjct: 189 NSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVR 248
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYR 255
GF D+++G I+ +YG+ +D A ++F MM ++ V+W++++ YV + EA
Sbjct: 249 RGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALE 308
Query: 256 LFERM-----------------------------PGK-------------DFVSWTTMIT 273
LF ++ G D + T+++
Sbjct: 309 LFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLS 368
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G + ++ FN M +D V++TAIISG+V N EE R F+EM + P + T
Sbjct: 369 MYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKAT 428
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L+SVL A A A L+ GS H + + +D I N+L+ +Y+KCG + A ++F +
Sbjct: 429 LASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMH 488
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+R IVS+N+MI + +G+G EAL LF M+ EGL P+ +TF+ ++SAC+H GLV EG
Sbjct: 489 KRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKY 548
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+F +M + I P EHYACMVD+L RAG E I M EP VWGALL A R +
Sbjct: 549 WFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVY 608
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N++L + ++ + +L P+S +V+LS++YS +G+ D +VR +K + KSPGCSW
Sbjct: 609 KNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSW 668
Query: 574 IILKDKVHLFLAG 586
I + VH FL G
Sbjct: 669 IEISGVVHTFLGG 681
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 215/441 (48%), Gaps = 54/441 (12%)
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPE--KNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
V + +VD Y + AR +FDKMP KNVV W ++ Y +E+ DL+ M
Sbjct: 52 VPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKML 111
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G+ N T + +AC EG ++H + R + ++ + +++ Y + G +D
Sbjct: 112 GYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLD 171
Query: 221 EANKVFSMMSKRDAVSWNSLISGY-VHNGEIEEAYRLFERMP------------------ 261
+A +VF M KRD V+WNS+ISG+ +H G +E RL +M
Sbjct: 172 DAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVA 231
Query: 262 -------GK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWT 300
GK D V T ++ + ++ + +F+MM K++VTW+
Sbjct: 232 QVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWS 291
Query: 301 AIISGFVNNEQYEEAFRWFIE--MLRKDV-RPNQLTLSSVLSASAATATLNQGSQIHAHV 357
A++ +V + EA F + ML+ DV + +TL++V+ A L+ G+ +H +
Sbjct: 292 AMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYA 351
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+K D+ + N+L+S+Y+KCG + A R F +D R+ VS+ ++ISG+ QNG EE L
Sbjct: 352 IKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGL 411
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG--PEHYAC-- 473
+F +M+ G+ P + T SVL AC H+ +++ S Y I G + C
Sbjct: 412 RMFLEMQLSGINPEKATLASVLPACAHL-----AGLHYGSCSHCYAIICGFTADTMICNA 466
Query: 474 MVDILGRAGSLAEAIDLINSM 494
++D+ + G + A + + M
Sbjct: 467 LIDMYAKCGKIDTARKVFDRM 487
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 194/454 (42%), Gaps = 98/454 (21%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGF-VRRGMFYEAEELYVNMPARWRDSVCSNALISGYL- 82
+A E+F M R+ V++ +MI+GF + G + E L V M D +++ I G L
Sbjct: 172 DAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQ---NDVSPNSSTIVGVLP 228
Query: 83 ---KVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNVV 134
+V I V + DVV ++D Y K + AR IFD M KN V
Sbjct: 229 AVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEV 288
Query: 135 AWTAMVDGYMKVDCFEDGFDLF---LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
W+AMV Y+ D + +LF L ++ + +++TL + C G +H
Sbjct: 289 TWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLH 348
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ GF D+++GN++++MY + G ++ A + F+ M RDAVS+ ++ISGYV NG E
Sbjct: 349 CYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSE 408
Query: 252 EAYRLFERM------PGK---------------------------------DFVSWTTMI 272
E R+F M P K D + +I
Sbjct: 409 EGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALI 468
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++ G ++ + ++F+ M ++ V+W +I + + EA F M + ++P+ +
Sbjct: 469 DMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDV 528
Query: 333 TLSSVLSASAATATLNQG---------------------------------SQIHAHVVK 359
T ++SA + + + +G ++H+ + K
Sbjct: 529 TFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEK 588
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
M +E DV + +L+S A R++ N++
Sbjct: 589 MPLEPDVRVWGALLS----------ACRVYKNVE 612
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 203/622 (32%), Positives = 324/622 (52%), Gaps = 46/622 (7%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---PARWRDS-VCSNALISGYLKV 84
+F M R+ +S+ +I G+V YEA L+ NM P RD + S AL + L V
Sbjct: 112 MFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGV 171
Query: 85 GRC-EEAARIF--EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
C E F ++ + V +++D Y K G++ + +F KM ++NVV+WTA++
Sbjct: 172 NICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIA 231
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G + + F M + ++S T I +A G +H + GFD
Sbjct: 232 GLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDE 291
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM- 260
+ N++ TMY + G D ++F M D VSW +LI+ YV GE E A F+RM
Sbjct: 292 SSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMR 351
Query: 261 -----PGK--------------------------------DFVSWTTMITGFSSKGNLEK 283
P K D +S I SK L K
Sbjct: 352 KSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLK 411
Query: 284 SIEL-FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
S L F+ + KD ++W+ II+ + +EAF + M R+ +PN+ LSSVLS
Sbjct: 412 SASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCG 471
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ A L QG Q+HAHV+ + ++ + + ++L+S+YSKCG+V +A +IF + NI+S+ +
Sbjct: 472 SMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTA 531
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
MI+G+A++G +EA+NLF K+ GL P+ +TF+ VL+AC+H G+V+ GF YF M Y
Sbjct: 532 MINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEY 591
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
I P EHY C++D+L RAG L+EA +I SM VW LL + R H ++D +
Sbjct: 592 QISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWT 651
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
A+ L+ L+P+SA ++ L+++Y+ G+ ++ +R K K + K G SW+ + DK++
Sbjct: 652 AEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNA 711
Query: 583 FLAGRKSCLDLKEIEVTLQTIS 604
F+AG ++ + I L+ +S
Sbjct: 712 FVAGDQAHPQSEHITTVLELLS 733
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 211/421 (50%), Gaps = 41/421 (9%)
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLT 172
K+G++ ++R +FDKM ++ ++WT ++ GY+ + LF +M + G+ + ++
Sbjct: 102 KQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMIS 161
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ +ACG G +HG + G + + +++I MY ++G +++ +VF M+KR
Sbjct: 162 VALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKR 221
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDFV 266
+ VSW ++I+G VH G EA F M GK
Sbjct: 222 NVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIH 281
Query: 267 SWT-------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+ T T+ T ++ G + + LF M D V+WT +I+ +V + E
Sbjct: 282 TQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEE 341
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A F M + +V PN+ T ++V+SA A A G QIH HV+++ + +S+ NS+V
Sbjct: 342 HAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIV 401
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+LYSK G + A +F I ++I+S++++I+ ++Q G +EA + M+ EG PN+
Sbjct: 402 TLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEF 461
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
SVLS C + L+E+G + + I+ ++ ++ + + GS+ EA + N
Sbjct: 462 ALSSVLSVCGSMALLEQGKQVHAHVLCI-GIDHEAMVHSALISMYSKCGSVEEASKIFNG 520
Query: 494 M 494
M
Sbjct: 521 M 521
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 138/285 (48%), Gaps = 40/285 (14%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM---PGK 263
NS + + G + ++ +F M+ RD +SW +LI+GYV+ + EA LF M PG
Sbjct: 94 NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153
Query: 264 DF-----------------VSWTTMITGFSSK--------------------GNLEKSIE 286
+ + ++ GFS K G +E+
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+F M +++ V+WTAII+G V+ EA +F EM V + T + L ASA ++
Sbjct: 214 VFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSL 273
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L+ G IH +K + + N+L ++Y+KCG R+F + ++VS+ ++I+
Sbjct: 274 LHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITT 333
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ Q G E A+ F++M+ + PN+ TF +V+SAC ++ + + G
Sbjct: 334 YVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWG 378
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
S + + NS + V G++ ++ +F++M +D +SWTT+I G+ + + +++ LF+
Sbjct: 86 SVHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFS 145
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
M W L++D Q +S L A +
Sbjct: 146 NM--------------------------WVQPGLQRD----QFMISVALKACGLGVNICF 175
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G +H VK + + V + ++L+ +Y K G + R+F + +RN+VS+ ++I+G
Sbjct: 176 GELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVH 235
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
G EAL F +M + + TF L A L+ G
Sbjct: 236 AGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHG 277
>gi|297820962|ref|XP_002878364.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324202|gb|EFH54623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 202/623 (32%), Positives = 322/623 (51%), Gaps = 82/623 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R ++N MI A N+ + +A ++F + P++N +S+ A+I+G+ + G EA L
Sbjct: 55 MPERDEFTWNTMIVAYSNSR-RLADAEQLFRSNPVKNTISWNALISGYCKSGSKVEAFNL 113
Query: 61 YVNMPARWRDSVCSNA--------LISGYLKVGRCEE-AARIFEAMVEKDVVAWGSMVDG 111
+ M + D + N + + L + R E+ + + DV ++
Sbjct: 114 FWEMQS---DGIKPNEYTLGSVLRMCTSLLLLLRGEQIHGHTIKTGFDLDVNVVNGLLAM 170
Query: 112 YCKKGRVIEAREIFDKMP-EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y + R+ EA +FD M EKN V WT+M+ GY + + F +RR G N T
Sbjct: 171 YAQCKRISEAEYLFDTMAGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRRDGNQSNQYT 230
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ AC R GVQVHG + + GF +I + +++I MY + ++ A + M
Sbjct: 231 FPSVLTACASVSACRVGVQVHGCIVKSGFKTNIYVQSALIDMYAKCRDLESARALLEGME 290
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSK-------- 278
D VSWNS+I G V G IEEA +F RM +D + +++ F+S
Sbjct: 291 VDDVVSWNSMIVGCVRQGLIEEALSMFGRMHERDMKIDDFTIPSILNCFASSRTEMKIAS 350
Query: 279 ----------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
G ++ ++++F M EKD ++WTA+++G +N YEEA + F M
Sbjct: 351 SAHCLIVKPGMRLTSLGIMDSALKVFEGMIEKDVISWTALVTGNTHNGFYEEALKLFCNM 410
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ P+Q+ +SVLSASA L G Q+H + +K S +S+ NSLV++Y+KCG++
Sbjct: 411 RVGGIYPDQIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSL 470
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
DA IF +++ R+++++ +I
Sbjct: 471 EDANVIFNSMEIRDLITWTCII-------------------------------------- 492
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
VGL+EE YF SM+T+Y I PGPEHYACM+D+ GR+G +A +L++ M EP V
Sbjct: 493 --VGLIEEAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKAEELLHQMEVEPDATV 550
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W A+L A R H N++ + AA+ LM+LEP++A PYV+LS++YS G++ + VR K
Sbjct: 551 WKAILAASRKHGNIENGERAAKTLMKLEPNNAVPYVLLSNMYSAAGRQDEAANVRRLMKS 610
Query: 563 KRIRKSPGCSWIILKDKVHLFLA 585
+ I K PGCSW+ K KVH F++
Sbjct: 611 RNINKEPGCSWVEEKGKVHSFMS 633
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 148/271 (54%), Gaps = 12/271 (4%)
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
+ R + N L+ +G ++EA ++F++MP +D +W TMI +S+ L + +LF
Sbjct: 25 ADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLADAEQLFR 84
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
P K+ ++W A+ISG+ + EAF F EM ++PN+ TL SVL + L +
Sbjct: 85 SNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLLLLLR 144
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF-TNIDERNIVSYNSMISGFA 408
G QIH H +K + DV++ N L+++Y++C + +A +F T E+N V++ SM++G++
Sbjct: 145 GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFDTMAGEKNNVTWTSMLTGYS 204
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLVEEGFIYFKSMKTLYN 463
QNG +A+ FR ++ +G NQ TF SVL+AC VG+ G I KT
Sbjct: 205 QNGFAFKAIECFRDLRRDGNQSNQYTFPSVLTACASVSACRVGVQVHGCIVKSGFKTNIY 264
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
++ + ++D+ + L A L+ M
Sbjct: 265 VQ------SALIDMYAKCRDLESARALLEGM 289
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 315/596 (52%), Gaps = 51/596 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR---WRDSVCSNALI 78
S+ A ++F +P N ++ +I + +++ +++ M + + D LI
Sbjct: 84 SLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLI 143
Query: 79 SGYLKVGRCEE--AARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
EE + F MV K DV S++ Y K G + +F +P +
Sbjct: 144 KA---ASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRR 200
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+VV+W +M+ +++ C E+ +LF M + N IT+ + AC + + G VH
Sbjct: 201 DVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVH 260
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ R + L N+++ MY + G +E
Sbjct: 261 SYIERNRIGESLTLSNAMLDMYTKCG-------------------------------SVE 289
Query: 252 EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
+A RLF++MP KD VSWTTM+ G++ G + + +F+ MP +D W A+IS + +
Sbjct: 290 DAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGK 349
Query: 312 YEEAFRWFIEM-LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+EA F E+ L K +P+++TL S LSA A ++ G IH ++ K M+ + +
Sbjct: 350 PKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTT 409
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SL+ +Y KCG++ A +F +++ +++ +++MI+G A +G G++A+ LF KM+++ + P
Sbjct: 410 SLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKP 469
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
N +TF ++L AC+HVGLVEEG +F M+ +Y + PG +HYACMVDILGRAG L EA++L
Sbjct: 470 NAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVEL 529
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I M P VWGALLGA H N+ LA+ A L+ELEP + YV+LS++Y+ GK
Sbjct: 530 IEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGK- 588
Query: 551 RDGNRVRMKKKLKR---IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+RV +KL R ++K PGCS I + VH FL G S K+I L I
Sbjct: 589 --WDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEI 642
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 175/402 (43%), Gaps = 82/402 (20%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGF--MDEANKVFSMMSKRDAVSWNSLISGYVH 246
Q+H + R G +D + +IT F +D A +VF + + +WN+LI Y
Sbjct: 53 QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYAS 112
Query: 247 NGEIEEAYRLFERM----P------------------------------------GKDFV 266
+ ++ +F RM P G D
Sbjct: 113 SSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVF 172
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
++I ++ G L +F +P +D V+W ++I+ FV EEA F EM ++
Sbjct: 173 ILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQN 232
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
V+PN +T+ VLSA A + G +H+++ + + +++ N+++ +Y+KCG+V DA
Sbjct: 233 VKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAK 292
Query: 387 RIFTNIDERNIVSYNSMISGFA-------------------------------QNGLGEE 415
R+F + E++IVS+ +M+ G+A Q G +E
Sbjct: 293 RLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKE 352
Query: 416 ALNLFRKMK-DEGLVPNQITFLSVLSACNHVGLVEEG---FIYFKSMKTLYNIEPGPEHY 471
AL LF +++ + P+++T +S LSAC +G ++ G +Y K N
Sbjct: 353 ALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLT---- 408
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
++D+ + G L +A+ + +S+ VW A++ H
Sbjct: 409 TSLIDMYCKCGDLQKALMVFHSVE-RKDVFVWSAMIAGLAMH 449
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 201/624 (32%), Positives = 329/624 (52%), Gaps = 49/624 (7%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELY--VNMPARWRDSVCSNALISGYLKVGRCEEA 90
MP RN VS+ +I G+V+ E +L+ V+ + ++ + V C E
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSV-ECAEL 59
Query: 91 ARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
A A + E + +++D Y G V AR+ FD + K++V+WT MV Y +
Sbjct: 60 AYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAE 119
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
D F+D LF MR G N T + +AC + G VHG V + ++ D+ +
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV 179
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----- 260
G ++ +Y + G ++ +VF M K D + W+ +IS Y + + EA LF +M
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239
Query: 261 -----------------------------------PGKDFVSWTTMITGFSSKGNLEKSI 285
G FVS ++ ++ G L+ S+
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVS-NALMDVYAKCGRLDNSM 298
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+LF +P +++VTW +I G+V + ++A + ML V+ +++T SSVL A A+ A
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+ G+QIH+ +K + DV + N+L+ +Y+KCG++ +A +F + ER+ +S+N+MIS
Sbjct: 359 AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMIS 418
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G++ +GL EAL F+ M++ VPN++TF+S+LSAC++ GL++ G YFKSM Y IE
Sbjct: 419 GYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE 478
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
P EHY CMV +LGR+G L +A+ LI + EP VW ALLGA H ++DL ++AQ
Sbjct: 479 PCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQ 538
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+++++P +V+LS++Y+ + VR K K ++K PG SWI + VH F
Sbjct: 539 ILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSV 598
Query: 586 GRKSCLDLKEIEVTLQTISKGTKE 609
G S D+K I L+ ++ T++
Sbjct: 599 GDTSHPDMKMISGMLEWLNMKTEK 622
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 143/280 (51%), Gaps = 12/280 (4%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNAL 77
+ +F MP + + ++ MI+ + + EA EL+ M P ++ SV +
Sbjct: 195 DVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCA 254
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
L++G+ + + + ++ +V +++D Y K GR+ + ++F ++P +N V W
Sbjct: 255 SIENLQLGK-QVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWN 313
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
M+ GY++ + L+ +M + + +T + + AC G Q+H L +
Sbjct: 314 TMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKT 373
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
+D D+++GN++I MY + G + A VF M+S+RD +SWN++ISGY +G + EA + F
Sbjct: 374 IYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAF 433
Query: 258 ERMPGKDFV----SWTTMITGFSSKGNLEKSIELFNMMPE 293
+ M + V ++ ++++ S+ G L+ F M +
Sbjct: 434 QMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQ 473
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 8/234 (3%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLK 83
+ ++F +P RN V++ MI G+V+ G +A LY NM V ++++
Sbjct: 297 SMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACAS 356
Query: 84 VGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
+ E +I + + +KDVV +++D Y K G + AR +FD + E++ ++W AM
Sbjct: 357 LAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAM 416
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ-VHGLVSRFG 198
+ GY + F M+ N +T + AC G +V +G
Sbjct: 417 ISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYG 476
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLISGYVHNGEIE 251
+ + ++ + GR G +D+A K+ + V W +L+ V + +++
Sbjct: 477 IEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVD 530
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 191/616 (31%), Positives = 338/616 (54%), Gaps = 50/616 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCS 74
S+ +A + F TM +R+ VS+ MI+G+ + G +A +Y+ M P + S+
Sbjct: 130 SLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIK 189
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
I+G + +G + + ++ + ++A +++ Y K G++ A ++F + K+++
Sbjct: 190 ACCIAGDIDLGG-QLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLI 248
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+W +M+ G+ ++ + LF M R+G N +F AC + G Q+ G+
Sbjct: 249 SWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGM 308
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
++FG ++ G S+ MY + GF+ A + F + D VSWN++I+ + N ++ EA
Sbjct: 309 CAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAA-LANSDVNEA 367
Query: 254 YRLFERM---------------------P----------------GKDFVS--WTTMITG 274
F +M P G D V+ +++T
Sbjct: 368 IYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTM 427
Query: 275 FSSKGNLEKSIELFNMMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ NL + +F + E + V+W AI+S ++Q EAFR F ML + +P+ +T
Sbjct: 428 YTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNIT 487
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
++++L A +L G+Q+H VK + DVS+ N L+ +Y+KCG + A +F +
Sbjct: 488 ITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQ 547
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+IVS++S+I G+AQ GLG+EALNLFR M++ G+ PN++T+L VLSAC+H+GLVEEG+
Sbjct: 548 NPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWH 607
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+ +M+ I P EH +CMVD+L RAG L EA + I F+P +W LL + +TH
Sbjct: 608 LYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTH 667
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N+D+A+ AA+++++L+P ++ V+LS++++ G ++ R+R K ++K PG SW
Sbjct: 668 GNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSW 727
Query: 574 IILKDKVHLFLAGRKS 589
I +KD++H+F + S
Sbjct: 728 IEVKDQIHVFFSEDSS 743
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 143/532 (26%), Positives = 260/532 (48%), Gaps = 61/532 (11%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
I ++ + D+V +++ Y K G + +AR+ FD M ++VV+WT M+ GY + D
Sbjct: 105 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQEND 164
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
+++ M R G + +T + +AC G Q+HG V + G+D+ +I N++I+
Sbjct: 165 AIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALIS 224
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------- 260
MY + G + A+ VF+M+S +D +SW S+I+G+ G EA LF M
Sbjct: 225 MYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEF 284
Query: 261 --------------P---------------GKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
P G++ + ++ ++ G L + F +
Sbjct: 285 IFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQI 344
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
D V+W AII+ N++ EA +F +M+ + P+ +T ++L A + TLNQG
Sbjct: 345 ESPDLVSWNAIIAALANSD-VNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGM 403
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER-NIVSYNSMISGFAQN 410
QIH++++KM ++ ++ NSL+++Y+KC N+ DA+ +F +I E N+VS+N+++S +Q+
Sbjct: 404 QIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQH 463
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPE 469
EA LF+ M P+ IT ++L C + +E G ++ S+K+ ++
Sbjct: 464 KQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVS 523
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL------GAGRTHLNLDLAKLAA 523
+ ++D+ + G L A + +S T P W +L+ G G+ LNL
Sbjct: 524 NR--LIDMYAKCGLLKHARYVFDS-TQNPDIVSWSSLIVGYAQFGLGQEALNL----FRM 576
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDG----NRVRMKKKLKRIRKSPGC 571
+ ++P+ T VLS S IG +G N + ++ + R+ C
Sbjct: 577 MRNLGVQPNEVTYLGVLSAC-SHIGLVEEGWHLYNTMEIELGIPPTREHVSC 627
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 192/444 (43%), Gaps = 55/444 (12%)
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDC----FEDGFDLF-LSMRRGGMAFNSITLTI 173
I++ + + + + N + Y+ + C + + D F ++ + T
Sbjct: 26 IQSCDAYGESYDTNYHGGELSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVN 85
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L AC + G ++H + + D++L N I+ MYG+ G + +A K F M R
Sbjct: 86 LILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRS 145
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM--------------------------------- 260
VSW +ISGY NG+ +A ++ +M
Sbjct: 146 VVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHG 205
Query: 261 ----PGKD--FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
G D ++ +I+ ++ G + + ++F M+ KD ++W ++I+GF E
Sbjct: 206 HVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIE 265
Query: 315 AFRWFIEMLRKDV-RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A F +M R+ V +PN+ SV SA + G QI K + +V SL
Sbjct: 266 ALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLC 325
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y+K G + A R F I+ ++VS+N++I+ A + + EA+ F +M GL+P+ I
Sbjct: 326 DMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDV-NEAIYFFCQMIHMGLMPDDI 384
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL----GRAGSLAEAID 489
TFL++L AC + +G Y I+ G + A + + L + +L +A +
Sbjct: 385 TFLNLLCACGSPMTLNQGMQIHS-----YIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFN 439
Query: 490 LINSMTFEPPPGVWGALLGAGRTH 513
+ ++ W A+L A H
Sbjct: 440 VFKDISENGNLVSWNAILSACSQH 463
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 118/231 (51%), Gaps = 12/231 (5%)
Query: 296 DVTWTAIISGFVNNEQYEEAFRWF-IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
+++ + I+ + Y EA F + ++ T +++ A +L G +IH
Sbjct: 44 ELSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIH 103
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
H++K N + D+ +QN ++++Y KCG++ DA + F + R++VS+ MISG++QNG
Sbjct: 104 DHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQEN 163
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA-- 472
+A+ ++ +M G P+Q+TF S++ AC G ++ G + I+ G +H+
Sbjct: 164 DAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHV-----IKSGYDHHLIA 218
Query: 473 --CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
++ + + G +A A D+ +M W +++ G T L ++ L
Sbjct: 219 QNALISMYTKFGQIAHASDVF-TMISTKDLISWASMI-TGFTQLGYEIEAL 267
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 135/308 (43%), Gaps = 23/308 (7%)
Query: 3 DRTSASYNAMITALINNNCS-IYEAFEIFATMPMR-NAVSYAAMITGFVRRGMFYEAEEL 60
D+ +A N+++T + CS +++AF +F + N VS+ A+++ + EA L
Sbjct: 415 DKVAAVCNSLLT--MYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRL 472
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARI----------FEAMVEKDVVAWGSMVD 110
+ M + ++ N I+ L G C E + ++ + DV ++D
Sbjct: 473 FKLM--LFSENKPDNITITTIL--GTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLID 528
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K G + AR +FD ++V+W++++ GY + ++ +LF MR G+ N +T
Sbjct: 529 MYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVT 588
Query: 171 LTILFEACGRFFRYREGVQVHGLVS-RFGFDYDIILGNSIITMYGRLGFMDEA-NKVFSM 228
+ AC EG ++ + G + ++ + R G + EA N +
Sbjct: 589 YLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKT 648
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFE---RMPGKDFVSWTTMITGFSSKGNLEKSI 285
D W +L++ +G ++ A R E ++ + + + +S GN ++
Sbjct: 649 GFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVA 708
Query: 286 ELFNMMPE 293
L N+M +
Sbjct: 709 RLRNLMKQ 716
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/641 (30%), Positives = 322/641 (50%), Gaps = 107/641 (16%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR------ 69
S+ EA +F +MP++N VS+ +MI+G+ R G A LYV M P +
Sbjct: 148 SLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVK 207
Query: 70 -------------------------DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA 104
D + NALIS Y K + +A +F ++ KD+++
Sbjct: 208 SCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLIS 267
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM 164
WGSM+ G+ + G +EA F +M ++V V G
Sbjct: 268 WGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSA-------------------- 307
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
F AC + G Q+HGL +FG D+ G S+ MY + GF++ A
Sbjct: 308 ----------FSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESART 357
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK--------------- 263
VF + K D V+WN++I+G+ +E+ F +M P
Sbjct: 358 VFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVM 417
Query: 264 ------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD-VTWTAIIS 304
D ++++ +S NL ++++F + K D V+W +++
Sbjct: 418 LNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLT 477
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
+ Q E R M ++P+ +TL++VL +S A+ GSQIH ++K +
Sbjct: 478 ACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNL 537
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D+S+ N+L+++Y+KCG++ A ++F +I +I+S++S+I G+AQ G G+EA LFR M+
Sbjct: 538 DISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMR 597
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
G+ PN+ITF+ +L+AC+H+G+VEEG +++M+ Y I P EH +CMVD+L RAG L
Sbjct: 598 GLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCL 657
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
A D I M F P VW LL A + H NL++ K AA+++++++P ++ V+L +++
Sbjct: 658 DVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIH 717
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+ G +D R+R + + K PG SWI +KDKVH+FLA
Sbjct: 718 ASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLA 758
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 156/626 (24%), Positives = 281/626 (44%), Gaps = 102/626 (16%)
Query: 25 EAFEIF---ATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA--RWRDSVCSNALIS 79
+AF+IF ++ P++ +V+Y +I +++ +M D + N ++S
Sbjct: 83 KAFDIFQKCSSSPLK-SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILS 141
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
Y K G +EA +F++M K+VV+W SM+ GY + G E N +
Sbjct: 142 MYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGE------------EDNAIT---- 185
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
L++ M R G + T + ++C ++ Q+H V + F
Sbjct: 186 ---------------LYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEF 230
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D+I N++I+MY + M +A VFS + +D +SW S+I+G+ G EA F
Sbjct: 231 GADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFRE 290
Query: 260 M-------P---------------------------------GKDFVSWTTMITGFSSKG 279
M P G D + ++ ++ G
Sbjct: 291 MLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCG 350
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
LE + +F + + D V W AII+GF + +E+ +F +M + PN +T+ S+L
Sbjct: 351 FLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLC 410
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIV 398
A + LN G Q+H+++VKM D+ + NSL+S+YSKC N+ DA ++F +I ++ +IV
Sbjct: 411 ACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIV 470
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKS 457
S+N++++ Q E L L + M + P+ +T +VL + + E G I+
Sbjct: 471 SWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFI 530
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL------GAGR 511
MK+ N++ + ++++ + GSL A + +S+ P W +L+ G G+
Sbjct: 531 MKSGLNLDISVSN--ALINMYTKCGSLECARKMFDSIG-NPDIISWSSLIVGYAQAGCGK 587
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV-RMKKKLKRIRKSP- 569
L + ++P+ T +V + S IG +G ++ R ++ RI +
Sbjct: 588 EAFEL----FRTMRGLGVKPNEIT-FVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKE 642
Query: 570 GCSWIILKDKVHLFLAGRKSCLDLKE 595
CS ++ L R CLD+ E
Sbjct: 643 HCSCMV-------DLLARAGCLDVAE 661
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 125/233 (53%), Gaps = 10/233 (4%)
Query: 221 EANKVFSMMSK-----RDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTM 271
EA K F + K +V++ LI+ +E ++ M D + +
Sbjct: 80 EALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHI 139
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
++ + G+L+++ +F+ MP K+ V+WT++ISG+ + + A +++MLR P+
Sbjct: 140 LSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T S++ + + Q+HAHV+K +D+ QN+L+S+Y+K + DA +F+
Sbjct: 200 FTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSR 259
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACN 443
I ++++S+ SMI+GF+Q G EAL FR+M + + PN+ F S SAC+
Sbjct: 260 IIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACS 312
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 206/669 (30%), Positives = 334/669 (49%), Gaps = 91/669 (13%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA 96
N+ +++ F++ G A + + ++D N ++SGY G ++A +
Sbjct: 224 NSCVKGSILDMFIKCGRMDIARRFFEEI--EFKDVFMWNIMVSGYTSKGEFKKALKCISD 281
Query: 97 M----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-----EKNVVAWTAMVDGYMKVD 147
M V+ D V W +++ GY + G+ EA + F +M + NVV+WTA++ G +
Sbjct: 282 MKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNG 341
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILG 206
+ +F M G+ NSIT+ AC R G ++HG + D D+++G
Sbjct: 342 YDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 401
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS--------------------------- 239
NS++ Y + ++ A + F M+ + D VSWN+
Sbjct: 402 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIE 461
Query: 240 --------LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG----------------- 274
L++G+ G+ + A F+RM TT I+G
Sbjct: 462 PDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEI 521
Query: 275 ----------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
+S +LE + +F+ + +D V W +IIS + +
Sbjct: 522 HGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRS 581
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
A EM +V N +T+ S L A + A L QG +IH +++ +++ I NSL
Sbjct: 582 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSL 641
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ +Y +CG++ + RIF + +R++VS+N MIS + +G G +A+NLF+ + GL PN
Sbjct: 642 IDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNH 701
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
ITF ++LSAC+H GL+EEG+ YFK MKT Y ++P E YACMVD+L RAG E ++ I
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
M FEP VWG+LLGA R H N DLA+ AA++L ELEP S+ YV+++++YS G+ D
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 821
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
++R K + + K PGCSWI +K K+H F+ G S +++I + G + D
Sbjct: 822 AAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQI-----SGKDGKLDVDE 876
Query: 613 PKHDWSLLG 621
+ ++SL G
Sbjct: 877 DEKEFSLCG 885
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 202/364 (55%), Gaps = 10/364 (2%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+++ YC+ G V +AR +FDKM E+NV +WTA+++ Y + +E+ LF M G+ +
Sbjct: 130 LLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPD 189
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+F+AC YR G V+ + GF+ + + SI+ M+ + G MD A + F
Sbjct: 190 HFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFE 249
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEK 283
+ +D WN ++SGY GE ++A + M D V+W +I+G++ G E+
Sbjct: 250 EIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEE 309
Query: 284 SIELFNMMPEKDD-----VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+ + F M D V+WTA+I+G N EA F +M+ + V+PN +T++S +
Sbjct: 310 ASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAV 369
Query: 339 SASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
SA + L G +IH + +K+ ++SD+ + NSLV Y+KC +V A R F I + ++
Sbjct: 370 SACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDL 429
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
VS+N+M++G+A G EEA+ L +MK +G+ P+ IT+ +++ G + +F+
Sbjct: 430 VSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQR 489
Query: 458 MKTL 461
M ++
Sbjct: 490 MHSM 493
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 17/291 (5%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C + + R G QVH + G D LG+ ++ +Y + G +++A ++F MS+R+
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFN 289
SW +++ Y G+ EE +LF M + D + + S N ++++
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214
Query: 290 MMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
M E + +I+ F+ + + A R+F E+ KDV + +S S
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-----ERNIVSY 400
L S + VK D N+++S Y++ G +A + F + + N+VS+
Sbjct: 275 ALKCISDMKLSGVK----PDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++I+G QNG EAL++FRKM EG+ PN IT S +SAC ++ L+ G
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 381
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 109/223 (48%)
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ G +E + +F+ M E++ +WTAI+ + YEE + F M+ + VRP+
Sbjct: 134 YCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVF 193
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
V A + G ++ +++ + E + ++ S++ ++ KCG + A R F I+
Sbjct: 194 PKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF 253
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+++ +N M+SG+ G ++AL MK G+ P+Q+T+ +++S G EE Y
Sbjct: 254 KDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKY 313
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
F M L + +P + ++ + G EA+ + M E
Sbjct: 314 FLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+S+L L G Q+HA +V ++ + + L+ +Y + G V DA R+F + E
Sbjct: 93 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
RN+ S+ +++ + G EE + LF M +EG+ P+ F V AC+ +
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 203
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/641 (30%), Positives = 322/641 (50%), Gaps = 107/641 (16%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR------ 69
S+ EA +F +MP++N VS+ +MI+G+ R G A LYV M P +
Sbjct: 148 SLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVK 207
Query: 70 -------------------------DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA 104
D + NALIS Y K + +A +F ++ KD+++
Sbjct: 208 SCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLIS 267
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM 164
WGSM+ G+ + G +EA F +M ++V V G
Sbjct: 268 WGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSA-------------------- 307
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
F AC + G Q+HGL +FG D+ G S+ MY + GF++ A
Sbjct: 308 ----------FSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESART 357
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK--------------- 263
VF + K D V+WN++I+G+ +E+ F +M P
Sbjct: 358 VFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVM 417
Query: 264 ------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD-VTWTAIIS 304
D ++++ +S NL ++++F + K D V+W +++
Sbjct: 418 LNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLT 477
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
+ Q E R M ++P+ +TL++VL +S A+ GSQIH ++K +
Sbjct: 478 ACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNL 537
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D+S+ N+L+++Y+KCG++ A ++F +I +I+S++S+I G+AQ G G+EA LFR M+
Sbjct: 538 DISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMR 597
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
G+ PN+ITF+ +L+AC+H+G+VEEG +++M+ Y I P EH +CMVD+L RAG L
Sbjct: 598 GLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCL 657
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
A D I M F P VW LL A + H NL++ K AA+++++++P ++ V+L +++
Sbjct: 658 DVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIH 717
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+ G +D R+R + + K PG SWI +KDKVH+FLA
Sbjct: 718 ASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLA 758
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 156/626 (24%), Positives = 281/626 (44%), Gaps = 102/626 (16%)
Query: 25 EAFEIF---ATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA--RWRDSVCSNALIS 79
+AF+IF ++ P++ +V+Y +I +++ +M D + N ++S
Sbjct: 83 KAFDIFQKCSSSPLK-SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILS 141
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
Y K G +EA +F++M K+VV+W SM+ GY + G E N +
Sbjct: 142 MYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGE------------EDNAIT---- 185
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
L++ M R G + T + ++C ++ Q+H V + F
Sbjct: 186 ---------------LYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEF 230
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D+I N++I+MY + M +A VFS + +D +SW S+I+G+ G EA F
Sbjct: 231 GADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFRE 290
Query: 260 M-------P---------------------------------GKDFVSWTTMITGFSSKG 279
M P G D + ++ ++ G
Sbjct: 291 MLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCG 350
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
LE + +F + + D V W AII+GF + +E+ +F +M + PN +T+ S+L
Sbjct: 351 FLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLC 410
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIV 398
A + LN G Q+H+++VKM D+ + NSL+S+YSKC N+ DA ++F +I ++ +IV
Sbjct: 411 ACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIV 470
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKS 457
S+N++++ Q E L L + M + P+ +T +VL + + E G I+
Sbjct: 471 SWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFI 530
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL------GAGR 511
MK+ N++ + ++++ + GSL A + +S+ P W +L+ G G+
Sbjct: 531 MKSGLNLDISVSN--ALINMYTKCGSLECARKMFDSIG-NPDIISWSSLIVGYAQAGCGK 587
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV-RMKKKLKRIRKSP- 569
L + ++P+ T +V + S IG +G ++ R ++ RI +
Sbjct: 588 EAFEL----FRTMRGLGVKPNEIT-FVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKE 642
Query: 570 GCSWIILKDKVHLFLAGRKSCLDLKE 595
CS ++ L R CLD+ E
Sbjct: 643 HCSCMV-------DLLARAGCLDVAE 661
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 125/233 (53%), Gaps = 10/233 (4%)
Query: 221 EANKVFSMMSK-----RDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTM 271
EA K F + K +V++ LI+ +E ++ M D + +
Sbjct: 80 EALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHI 139
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
++ + G+L+++ +F+ MP K+ V+WT++ISG+ + + A +++MLR P+
Sbjct: 140 LSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T S++ + + Q+HAHV+K +D+ QN+L+S+Y+K + DA +F+
Sbjct: 200 FTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSR 259
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACN 443
I ++++S+ SMI+GF+Q G EAL FR+M + + PN+ F S SAC+
Sbjct: 260 IIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACS 312
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 313/577 (54%), Gaps = 41/577 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---PARWRDSVCSNALI 78
S+ A ++F +P N ++ +I F + +++ M R+ +S +I
Sbjct: 79 SLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVI 138
Query: 79 SGYLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+V A + MV K D+ S++ Y G + A +F K+ EK++
Sbjct: 139 KAATEVSSLL-AGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDI 197
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W +M+ G+++ E+ LF M+ N +T+ + AC + G
Sbjct: 198 VSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDY 257
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ R G D ++IL N+++ MY V G +E+A
Sbjct: 258 IERNGIDINLILSNAMLDMY-------------------------------VKCGSLEDA 286
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
RLF++M KD VSWTTMI G++ G+ + + +F++MP +D W A+IS + N + +
Sbjct: 287 RRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPK 346
Query: 314 EAFRWFIEM-LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA F E+ L K+ +PN++TL+S L+A A ++ G IH ++ K ++ + I SL
Sbjct: 347 EALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSL 406
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ +YSKCG++ A +F +++ R++ +++MI+G A +G G A++LF KM++ + PN
Sbjct: 407 IDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNA 466
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
+TF ++L AC+H GLV+EG ++F M+ +Y + PG +HYACMVDILGRAG L EA++LI
Sbjct: 467 VTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIE 526
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
M P VWGALLGA R + N++LA++A L+E + ++ YV+LS++Y+ GK
Sbjct: 527 KMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDC 586
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+R+R K+ + K PGCS I + +H FL G S
Sbjct: 587 VSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNS 623
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/508 (36%), Positives = 284/508 (55%), Gaps = 39/508 (7%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD+MP+++V W ++ GY E+ L+ +M G+ ++ T + +C
Sbjct: 81 ARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAV 140
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
REG +VH + + GFD D+ + +S++ MY + G VF M R+ VSW ++
Sbjct: 141 LSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAV 200
Query: 241 ISGYVHNGEIEEAYRLFERMPGK-------------------DFVSWTTMITGFSSK--- 278
I+GYV N +E +F M G +F++ +I G+ K
Sbjct: 201 IAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGV 260
Query: 279 -----------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
GN+E + LF+ M ++ V+W A+I+ + N A + F
Sbjct: 261 DPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRR 320
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + V + +T+ SV+SA A+ LN G +H V + +E +VSI N+L+ +Y+KCGN
Sbjct: 321 MQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGN 380
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ A +F + R++VS+ SMI A +G GE+AL LF +MKDEG+ PN TF +V +A
Sbjct: 381 IDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTA 440
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C H GLVEEG +F+SM Y+I PG EH ACMVD+LGRAGSL EA + I+ M EP
Sbjct: 441 CRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVS 500
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VWGALLG+ R H NL+LA+L A+ L L+P + T YV++S++Y+ G+ D R+R +
Sbjct: 501 VWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLME 560
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ ++K PG S + + + H FL+G +S
Sbjct: 561 ERELKKIPGHSLVEVNRRFHTFLSGSRS 588
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 177/369 (47%), Gaps = 50/369 (13%)
Query: 189 QVHGLVSRFGFDYDIILGNS-IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++H LV G +++L IIT MD A K+F M KRD WN+LI GY
Sbjct: 47 RIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADA 106
Query: 248 GEIEEAYRLFERMPG---------------------------------------KDFVSW 268
G EEA L+ M G D
Sbjct: 107 GPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQ 166
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
++++ +S G +F M ++ V+WTA+I+G+V N ++E F EM+ +
Sbjct: 167 SSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQ 226
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN +TL SVL A A LN G IH + +K+ ++ DVS+ N+L++LY KCGNV A +
Sbjct: 227 PNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSL 286
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + +N+VS+N+MI+ + QN G A+ LFR+M+ E + + IT +SV+SAC +G +
Sbjct: 287 FDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGAL 346
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG----VWG 504
G + + +E ++D+ + G+ IDL + FE P W
Sbjct: 347 NTGR-WMHELVKRKGLEINVSITNALIDMYAKCGN----IDLAREV-FERLPCRSVVSWT 400
Query: 505 ALLGAGRTH 513
+++GA +H
Sbjct: 401 SMIGACASH 409
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 198/425 (46%), Gaps = 54/425 (12%)
Query: 14 TALINNNCSIYE----AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PAR 67
T LI C + A ++F MP R+ + +I G+ G EA LY NM
Sbjct: 65 TKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGL 124
Query: 68 WRDS------VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
+ D+ V S A++S L+ G+ E I + + DV S+V Y + G +
Sbjct: 125 FPDNYTFPFVVRSCAVLSA-LREGK-EVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGM 182
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
+F +M +N+V+WTA++ GY++ F++G +F M G N++TL + AC
Sbjct: 183 ELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGL 242
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
G +HG + G D D+ L N++I +YG+ G ++ A +F M ++ VSWN++I
Sbjct: 243 EFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMI 302
Query: 242 SGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITG----------------------- 274
+ Y N A +LF RM + D+++ ++I+
Sbjct: 303 AAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLE 362
Query: 275 ------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
++ GN++ + E+F +P + V+WT++I ++ E+A + F M
Sbjct: 363 INVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRM 422
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYSKCGN 381
+ V+PN T ++V +A + + +G + +++ ++ V +V L + G+
Sbjct: 423 KDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGS 482
Query: 382 VVDAY 386
+++AY
Sbjct: 483 LMEAY 487
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 181/412 (43%), Gaps = 44/412 (10%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALISGY 81
+F M +RN VS+ A+I G+V+ F E ++ M SV +
Sbjct: 185 VFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEF 244
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L +G+ I + V+ DV +++ Y K G V AR +FD M +N+V+W AM+
Sbjct: 245 LNLGKLIHGYGI-KLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIA 303
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
Y + + + LF M+ + F+ IT+ + AC G +H LV R G +
Sbjct: 304 AYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEI 363
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++ + N++I MY + G +D A +VF + R VSW S+I +G E+A +LF RM
Sbjct: 364 NVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMK 423
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+ + + T+ A+ + ++ EE + F
Sbjct: 424 DEGV---------------------------KPNSFTFAAVFTACRHSGLVEEGRKHFES 456
Query: 322 MLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M+R + P + ++ +L + + + KM +E DVS+ +L+
Sbjct: 457 MMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEF---IDKMPVEPDVSVWGALLGSCRIHS 513
Query: 381 NV----VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
N+ + A ++F +D + + Y M + +A+ G E+A L + M++ L
Sbjct: 514 NLELAELVAEKLFL-LDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEEREL 564
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLK 83
A E+F +P R+ VS+ +MI G +A +L+ M +S A+ +
Sbjct: 384 AREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRH 443
Query: 84 VGRCEEAARIFEAMVEKDVVAWG-----SMVDGYCKKGRVIEAREIFDKMP-EKNVVAWT 137
G EE + FE+M+ + G MVD + G ++EA E DKMP E +V W
Sbjct: 444 SGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWG 503
Query: 138 AMV 140
A++
Sbjct: 504 ALL 506
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/487 (36%), Positives = 279/487 (57%), Gaps = 34/487 (6%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F ++ + V W ++ + + + F F M+ G +S T + +AC
Sbjct: 81 ASSVFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIKACSG 140
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ REG +HG R G D D+ +G S+I MYG+ G + +A KVF MS R+ VSW ++
Sbjct: 141 TCKAREGKSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAM 200
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK------ 294
+ GYV G++ EA +LF+ MP ++ SW +M+ GF G+L + +F+ MPEK
Sbjct: 201 LVGYVAVGDVVEARKLFDEMPHRNVASWNSMLQGFVKMGDLSGARGVFDAMPEKNVVSFT 260
Query: 295 -------------------------DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
D V W+A+ISG+V N +A R F+EM +V+P
Sbjct: 261 TMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQALRVFLEMELMNVKP 320
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKM--NMESDVSIQNSLVSLYSKCGNVVDAYR 387
++ L S++SASA L + ++V K+ +++ D I +L+ + +KCGN+ A +
Sbjct: 321 DEFILVSLMSASAQLGHLELAQWVDSYVSKICIDLQQDHVIA-ALLDMNAKCGNMERALK 379
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F R++V Y SMI G + +G GEEA+NLF +M EGL P+++ F +L+AC+ GL
Sbjct: 380 LFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILTACSRAGL 439
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
V+EG YF+SMK Y I P P+HYACMVD+L R+G + +A +LI + +EP G WGALL
Sbjct: 440 VDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSGHIRDAYELIKLIPWEPHAGAWGALL 499
Query: 508 GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRK 567
GA + + + +L ++ A L ELEP +A YV+LSD+Y+ + D + VR K + +R+RK
Sbjct: 500 GACKLYGDSELGEIVANRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKMRERRVRK 559
Query: 568 SPGCSWI 574
PG S I
Sbjct: 560 IPGSSKI 566
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 147/279 (52%), Gaps = 11/279 (3%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCS-NALISGY 81
I +A ++F M RN VS+ AM+ G+V G EA +L+ MP R +V S N+++ G+
Sbjct: 179 IADARKVFDGMSDRNVVSWTAMLVGYVAVGDVVEARKLFDEMPHR---NVASWNSMLQGF 235
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+K+G A +F+AM EK+VV++ +M+DGY K G + AR +FD EK+VVAW+A++
Sbjct: 236 VKMGDLSGARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALIS 295
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY++ +FL M + + L L A + V VS+ D
Sbjct: 296 GYVQNGLPNQALRVFLEMELMNVKPDEFILVSLMSASAQLGHLELAQWVDSYVSKICIDL 355
Query: 202 --DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D ++ +++ M + G M+ A K+F +RD V + S+I G +G EEA LF R
Sbjct: 356 QQDHVIA-ALLDMNAKCGNMERALKLFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNR 414
Query: 260 M----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
M D V++T ++T S G +++ F M +K
Sbjct: 415 MLMEGLTPDEVAFTVILTACSRAGLVDEGRNYFQSMKQK 453
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 188/424 (44%), Gaps = 97/424 (22%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
+D +LI Y K G +A ++F+ M +++VV+W +M+ GY G V+EAR++FD+M
Sbjct: 161 QDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVGYVAVGDVVEARKLFDEM 220
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P +NV +W +M+ G++K+ +F +M N ++ T + +
Sbjct: 221 PHRNVASWNSMLQGFVKMGDLSGARGVFDAMPEK----NVVSFTTMIDG----------- 265
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Y + G M A +F ++D V+W++LISGYV NG
Sbjct: 266 ------------------------YAKAGDMAAARFLFDCSLEKDVVAWSALISGYVQNG 301
Query: 249 EIEEAYRLFERM-----PGKDFVSWTTM--------------ITGFSSK----------- 278
+A R+F M +F+ + M + + SK
Sbjct: 302 LPNQALRVFLEMELMNVKPDEFILVSLMSASAQLGHLELAQWVDSYVSKICIDLQQDHVI 361
Query: 279 ----------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
GN+E++++LF+ P +D V + ++I G + + EEA F ML + +
Sbjct: 362 AALLDMNAKCGNMERALKLFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLT 421
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS-LVSLYSKCGNVVDAYR 387
P+++ + +L+A + +++G + + S + + +V L S+ G++ DAY
Sbjct: 422 PDEVAFTVILTACSRAGLVDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSGHIRDAYE 481
Query: 388 IFTNID-ERNIVSYNSMISG---FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+ I E + ++ +++ + + LGE +V N++ L L+A N
Sbjct: 482 LIKLIPWEPHAGAWGALLGACKLYGDSELGE-------------IVANRLFELEPLNAAN 528
Query: 444 HVGL 447
+V L
Sbjct: 529 YVLL 532
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 163/368 (44%), Gaps = 55/368 (14%)
Query: 167 NSITLTILFEACGRFFRYREGV-QVHGLVSRFGFDYDIILGNSIIT-MYGRLGFMDEANK 224
++ ++T L +AC + RE + QVH + G + D L I+ + L + A+
Sbjct: 28 SAASITTLLKACKK----REHLEQVHACIIHRGLEQDHFLVFLFISRAHTLLSTLSYASS 83
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG---------------------- 262
VF + V WN+LI + F RM
Sbjct: 84 VFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIKACSGTCK 143
Query: 263 -----------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
+D T++I + G + + ++F+ M +++ V+WTA++ G
Sbjct: 144 AREGKSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVG 203
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+V EA + F EM ++V + +S+L L+ + + + N+ S
Sbjct: 204 YVAVGDVVEARKLFDEMPHRNVA----SWNSMLQGFVKMGDLSGARGVFDAMPEKNVVS- 258
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+++ Y+K G++ A +F E+++V+++++ISG+ QNGL +AL +F +M+
Sbjct: 259 ---FTTMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQALRVFLEMEL 315
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY-ACMVDILGRAGSL 484
+ P++ +S++SA +G +E + S + I+ +H A ++D+ + G++
Sbjct: 316 MNVKPDEFILVSLMSASAQLGHLELA-QWVDSYVSKICIDLQQDHVIAALLDMNAKCGNM 374
Query: 485 AEAIDLIN 492
A+ L +
Sbjct: 375 ERALKLFD 382
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 12/255 (4%)
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
L + +F+ + V W +I + F M P+ T SV+
Sbjct: 77 TLSYASSVFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIK 136
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A + T +G +H + ++ D+ + SL+ +Y KCG + DA ++F + +RN+VS
Sbjct: 137 ACSGTCKAREGKSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVS 196
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+ +M+ G+ G EA LF +M N ++ S+L +G + F +M
Sbjct: 197 WTAMLVGYVAVGDVVEARKLFDEMPHR----NVASWNSMLQGFVKMGDLSGARGVFDAMP 252
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAGRTHL-NLD 517
E + M+D +AG +A A L + + E W AL+ G + L N
Sbjct: 253 -----EKNVVSFTTMIDGYAKAGDMAAARFLFDC-SLEKDVVAWSALISGYVQNGLPNQA 306
Query: 518 LAKLAAQHLMELEPD 532
L LM ++PD
Sbjct: 307 LRVFLEMELMNVKPD 321
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 314/590 (53%), Gaps = 39/590 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGY-- 81
A +F +P N + MI G+ R LY+ M R D L G+
Sbjct: 71 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130
Query: 82 ---LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
L+ GR + + + ++ +V ++V Y G++ AR +FD P+ +V+ W
Sbjct: 131 DIALEYGR-QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 189
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ Y KV FE+ LFL M + ++TL ++ AC + R G +VH V
Sbjct: 190 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 249
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ +++L N++I MY G E++ A +F
Sbjct: 250 VESNLVLENAMIDMYADCG-------------------------------EMDSALGIFR 278
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
M +D +SWTT+++GF++ G ++ + F+ MPEKD V+WTA+I G++ + +++EA
Sbjct: 279 SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALEL 338
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F M +V+P++ T+ SVL+A A L G I ++ + +++D+ ++N+L+ +Y K
Sbjct: 339 FRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFK 398
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG+V A IF + +R+ ++ +MI G A NG GE+AL++F M ++P++IT++ V
Sbjct: 399 CGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGV 458
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSAC H GLV++G YF M + + IEP HY C+VD+L RAG L EA ++I +M +
Sbjct: 459 LSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKA 518
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
VWGALL R + D+A++ + ++ELEPD+ YV+L ++Y+ + D +R
Sbjct: 519 NSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQ 578
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K I+K+PGCS I + +VH F+AG +S K I+ L +++ K
Sbjct: 579 MMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLK 628
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 7/219 (3%)
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G+ + + LF+ +PE + W +I G+ + + ++EMLR+ V+P++ T +
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
L G Q+H HV+K ++ +V + +LV +Y CG + A +F + +++
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 185
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---FIYF 455
++N +IS + + G EE+ LF M+D+ ++P +T + VLSAC+ + + G Y
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
K+ K +E M+D+ G + A+ + SM
Sbjct: 246 KNCK----VESNLVLENAMIDMYADCGEMDSALGIFRSM 280
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYL 82
+A IF M R+ ++ AMI G G +A +++ NM + D + ++S
Sbjct: 404 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 463
Query: 83 KVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAW 136
G ++ + F M +E ++ +G +VD + GR+ EA E+ + MP K N + W
Sbjct: 464 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVW 523
Query: 137 TAMVDG---YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
A++ G Y + D E L + A + L ++ AC R+ RE Q+
Sbjct: 524 GALLAGCRVYRESDMAEMVVKQILELEPDNGAV-YVLLCNIYAACKRWNDLRELRQM 579
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS--KCGNVVDAYRIFTNIDE 394
++S +++Q Q+H +K + ++ +QN +++ + G+ A R+F I E
Sbjct: 21 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 80
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
N+ +N+MI G+++ + ++L+ +M G+ P++ TF
Sbjct: 81 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTF 121
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 318/623 (51%), Gaps = 74/623 (11%)
Query: 41 YAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGRCEEAARIFEAMV 98
Y A++ F +A+ L+ ++ + ++ N LIS Y K+G A ++F+ M
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
++ +W +++ Y K GRV E +FD MP ++ V+W +++ GY +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 159 MRR--GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
M + G N IT + L + + G Q+HG V +FGF + +G+ ++ MY ++
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 217 GFMDEANKVFSM-------------------------------MSKRDAVSWNSLISGYV 245
G + A KVF M +RD++SW S+I+G+
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 246 HNGEIEEAYRLFERMP--------------------------GKDFVSW----------- 268
NG +A +F M GK ++
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 269 --TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+ ++ + N++ + +F M K+ V+WTA++ G+ N EEA + F +M +
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+ P+ TL SV+S+ A A+L +G+Q HA + + S +++ N+LV+LY KCG++ D++
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSH 431
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
R+F I ++ V++ +++SG+AQ G E + LF M GL P+++TF+ VLSAC+ G
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG 491
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
LVE+G F+SM + I P +HY CM+D+ RAG + EA + IN M F P W L
Sbjct: 492 LVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATL 551
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
L + R + N+D+ K AA+ LMEL+P + YV+LS +Y+ GK + R+R + K +R
Sbjct: 552 LSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLR 611
Query: 567 KSPGCSWIILKDKVHLFLAGRKS 589
K PGCSWI K++VH+F A KS
Sbjct: 612 KEPGCSWIKYKNQVHVFSADDKS 634
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 217/643 (33%), Positives = 347/643 (53%), Gaps = 68/643 (10%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNA-LISGY----------LKVGRCEEAARI 93
+ G VR+ EA +L+++M + S S L+S + LK GR I
Sbjct: 1 MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVI 60
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
+V+ V +V+ Y K G + +AR +F M EK+ V+W +M+ G + CF +
Sbjct: 61 TTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAV 120
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
+ + SMRR + S TL +C + G Q+HG + G D ++ + N+++T+Y
Sbjct: 121 ERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLY 180
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE--IEEAYRLF-------------- 257
G+++E K+FS M + D VSWNS+I G + + E + EA F
Sbjct: 181 AETGYLNECRKIFSSMPEHDQVSWNSII-GALASSERSLPEAVACFLNALRAGQKLNRIT 239
Query: 258 -----------------ERMPG--------KDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
+++ G + + +I + G ++ ++F+ M
Sbjct: 240 FSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMS 299
Query: 293 EK-DDVTWTAIISGFVNNEQYEEAFR--WFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
E+ DDVTW ++ISG+++NE +A WF ML+ R + ++VLSA A+ ATL +
Sbjct: 300 ERRDDVTWNSMISGYIHNELLAKALDLVWF--MLQTGQRLDSFMYATVLSAFASVATLER 357
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G ++HA V+ +ESDV + ++LV +YSKCG + A R F + RN S+NSMISG+A+
Sbjct: 358 GMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYAR 417
Query: 410 NGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
+G GEEAL LF MK +G P+ +TF+ VLSAC+H GL+EEGF +F+SM Y + P
Sbjct: 418 HGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRI 477
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA-----GRTHLNLDLAKLAA 523
EH++CM D+LGRAG L + D I+ M +P +W +LGA GR +L K AA
Sbjct: 478 EHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGR---KAELGKKAA 534
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ L +LEP++A YV+L ++Y+ G+ D + R K K ++K G SW+ +KD VH+F
Sbjct: 535 EMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMF 594
Query: 584 LAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
+AG KS D I L+ +++ ++ + P+ ++L LE++
Sbjct: 595 VAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQE 637
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 178/379 (46%), Gaps = 52/379 (13%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR--DSVC 73
SI +A +F M +++VS+ +MITG + G F EA E Y +M P + S+
Sbjct: 84 SIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLS 143
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
S A + + K+G+ + + ++ +V +++ Y + G + E R+IF MPE +
Sbjct: 144 SCASLK-WAKLGQ-QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 201
Query: 134 VAWTAMVDGYMKVD-CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
V+W +++ + + FL+ R G N IT + + A G Q+HG
Sbjct: 202 VSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG 261
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIE 251
L ++ + N++I YG+ G MD K+FS MS +RD V+WNS+ISGY+HN +
Sbjct: 262 LALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLA 321
Query: 252 EAYRL--FERMPGK--DFVSWTTMITGFSSKGNLEKSIEL-------------------- 287
+A L F G+ D + T+++ F+S LE+ +E+
Sbjct: 322 KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALV 381
Query: 288 ---------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM-LRKDVRPNQ 331
FN MP ++ +W ++ISG+ + Q EEA + F M L P+
Sbjct: 382 DMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDH 441
Query: 332 LTLSSVLSASAATATLNQG 350
+T VLSA + L +G
Sbjct: 442 VTFVGVLSACSHAGLLEEG 460
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR---DSVCSNALISGYL 82
A F TMP+RN+ S+ +MI+G+ R G EA +L+ NM + D V ++S
Sbjct: 393 ALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACS 452
Query: 83 KVGRCEEAARIFEAMVEKDVVA-----WGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAW 136
G EE + FE+M + +A + M D + G + + + DKMP K NV+ W
Sbjct: 453 HAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIW 512
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAF--------NSITLTILFEACGRF 181
++ C +G L + M F N + L ++ A GR+
Sbjct: 513 RTVLGAC----CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRW 561
>gi|115461705|ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group]
gi|45680436|gb|AAS75237.1| unknown protein [Oryza sativa Japonica Group]
gi|113578003|dbj|BAF16366.1| Os05g0112900 [Oryza sativa Japonica Group]
gi|215715346|dbj|BAG95097.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736909|dbj|BAG95838.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629956|gb|EEE62088.1| hypothetical protein OsJ_16872 [Oryza sativa Japonica Group]
Length = 661
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 310/557 (55%), Gaps = 13/557 (2%)
Query: 29 IFATMPMRN-AVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRC 87
+F MP R+ AV+YAAM+ + AE LY P R ++ GY+K G+
Sbjct: 80 MFDGMPRRDDAVAYAAMVGIHLWDRDLPHAEALYRAAPPDCRGIHLDTVMLDGYVKAGQV 139
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
+ A R+F+ M K+VVAW MV GYC+ G V EAR +FD MP +NV +WT MV GY
Sbjct: 140 DRARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLMPYRNVFSWTTMVQGYAHNG 199
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
+ ++F M N + T++ +A +E +++ + + + N
Sbjct: 200 MLREAREMFDKMPE----RNVVAWTVMVKAYVDNGCIQEALELFNRMPQM----NSYSWN 251
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS 267
++ T G +D+A ++F M ++ VSW +++G NG + A F+RMP KD +
Sbjct: 252 AMATGLMSAGKVDDAVQLFDKMPHKNVVSWTIMVTGLAQNGFVSRAREFFDRMPKKDIPA 311
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
W +MIT +++ G + + LF++MP K+ VTW II G+ N +EA R F+ MLR V
Sbjct: 312 WNSMITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAV 371
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ TL SVL S +T + Q IH K+ + + ++ N+LVS+YS+ G++ A+
Sbjct: 372 SPDSTTLISVLVVSESTMEVRQ---IHGLSTKLGYQPETNLGNTLVSMYSRSGDLSSAWL 428
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
F ++E++ +++ SMI A +G AL F +M G P+ TF +VLSACNHVGL
Sbjct: 429 AFRRLNEKDAITWTSMIQALANHGCAPCALQGFAQMLRCGYKPSSTTFTAVLSACNHVGL 488
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE-PPPGVWGAL 506
VE+G FKS+ +Y + P EHY+C+VD+LGRAG + EA ++++ M + + G L
Sbjct: 489 VEKGRKIFKSISHVYGLGPTIEHYSCLVDLLGRAGYVREAKEVVDGMQRDMCDEAILGTL 548
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
LG+ TH +++ + + L++++P + Y +L+++++ G + V K +++
Sbjct: 549 LGSCMTHNEVEVGRAVGEDLVKIDPSGSGGYTLLANVFASGGMWNEVASVWKIMKGSKVK 608
Query: 567 KSPGCSWIILKDKVHLF 583
K+PG S I + + H+F
Sbjct: 609 KTPGFSQIEVNARNHVF 625
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 70/342 (20%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--- 67
T +++ C + EA +F MP RN S+ M+ G+ GM EA E++ MP R
Sbjct: 158 TCMVSGYCRAGLVDEARRLFDLMPYRNVFSWTTMVQGYAHNGMLREAREMFDKMPERNVV 217
Query: 68 --------WRDSVCS------------------NALISGYLKVGRCEEAARIFEAMVEKD 101
+ D+ C NA+ +G + G+ ++A ++F+ M K+
Sbjct: 218 AWTVMVKAYVDNGCIQEALELFNRMPQMNSYSWNAMATGLMSAGKVDDAVQLFDKMPHKN 277
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM---------------------- 139
VV+W MV G + G V ARE FD+MP+K++ AW +M
Sbjct: 278 VVSWTIMVTGLAQNGFVSRAREFFDRMPKKDIPAWNSMITAYTNDGQVNDAQRLFDIMPS 337
Query: 140 ---------VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
+DGY + ++ LFL M R ++ +S TL + R Q+
Sbjct: 338 KNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAVSPDSTTLISVLVVSESTMEVR---QI 394
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HGL ++ G+ + LGN++++MY R G + A F ++++DA++W S+I ++G
Sbjct: 395 HGLSTKLGYQPETNLGNTLVSMYSRSGDLSSAWLAFRRLNEKDAITWTSMIQALANHGCA 454
Query: 251 EEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELF 288
A + F +M + ++T +++ + G +EK ++F
Sbjct: 455 PCALQGFAQMLRCGYKPSSTTFTAVLSACNHVGLVEKGRKIF 496
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 295/525 (56%), Gaps = 8/525 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y G R IFD++ +KNVV + M+ Y+ ++D +F +M G +
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ T + +AC G+Q+HG V + G D ++ +GN +++MYG+ ++D A +V
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 196
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSWTTMITGFSSKGNL 281
M RD VSWNS+++GY NG +A +L M P + +S N+
Sbjct: 197 EMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNV 256
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
++F + EK ++W +I+ +VNN EA +++M V P+ +++SSVL A
Sbjct: 257 LYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPAC 316
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ G +IH +V + + ++ ++N+L+ +Y+KCG + +A +F + R++VS+
Sbjct: 317 GDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWT 376
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
SMIS + +G G++A+ LF+KM+D G P+ I F+SVL+AC+H GLV+EG F M
Sbjct: 377 SMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE- 435
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I PG EHY CMVD+LGRAG + EA L M EP VWG+LL A R + ++++A L
Sbjct: 436 YGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALL 495
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA HL +L P+ + YV+LS++Y+ G+ +D VR K I+K PG S + + D V+
Sbjct: 496 AADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVY 555
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
FLAG +S KEI L + KE + P+ D +L +E +
Sbjct: 556 TFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEE 600
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 201/449 (44%), Gaps = 58/449 (12%)
Query: 1 MADRTSASYNAMITALINNNCSIYE-AFEIFATMPMR----NAVSYAAMITGFVRRGMFY 55
+ D+ +N MI + +NN +Y+ A +F TM + + +Y ++ G +
Sbjct: 97 ITDKNVVFFNVMIRSYVNN--GLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLW 154
Query: 56 EAEELYVNMPARWRDS--VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+++ + D N L+S Y K + A R+ + M +D+V+W SMV GY
Sbjct: 155 VGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYA 214
Query: 114 KKGR-------------------------------------VIEAREIFDKMPEKNVVAW 136
+ GR V+ +++F K+ EK++++W
Sbjct: 215 QNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISW 274
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
M+ Y+ + DL+L M+ G+ ++++++ + ACG G ++H V R
Sbjct: 275 NVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVER 334
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
+++L N++I MY + G + EA VF M RD VSW S+IS Y +G+ ++A L
Sbjct: 335 KKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVAL 394
Query: 257 FERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT----WTAIISGFVN 308
F++M D++++ +++ S G +++ FN+M E + ++
Sbjct: 395 FKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGR 454
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
+ +EA+ +M + PN+ S+LSA +++N H+ ++ E
Sbjct: 455 AGKIDEAYHLTRQM---PMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQS-GY 510
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L ++Y+K G D + + ++ + I
Sbjct: 511 YVLLSNIYAKAGRWQDVETVRSIMNSKGI 539
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 139/336 (41%), Gaps = 83/336 (24%)
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
LG ++ Y G +F ++ ++ V +N +I YV+NG ++A +F+ M +
Sbjct: 73 LGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQG 132
Query: 265 F----VSWTTMITGFSSKGN-----------------------------------LEKSI 285
F ++ ++ S GN L+ +
Sbjct: 133 FYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAAR 192
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+ + MP +D V+W ++++G+ N ++ +A + EM ++P+ T+ S+L A T+
Sbjct: 193 RVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTS 252
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
C NV+ +F + E++++S+N MI+
Sbjct: 253 ---------------------------------CDNVLYVKDMFVKLKEKSLISWNVMIA 279
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-----FIYFKSMKT 460
+ N + EA++L+ +M+ G+ P+ ++ SVL AC + G ++ K ++
Sbjct: 280 VYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRP 339
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
+E ++D+ + G L EA + + M F
Sbjct: 340 NLLLENA------LIDMYAKCGCLKEARAVFDQMMF 369
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 352 QIHAHV-VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
++H+ + + N+ + S+ L+ Y+ CG IF I ++N+V +N MI + N
Sbjct: 56 KLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNN 115
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
GL ++AL +F+ M ++G P+ T+ VL AC+ G
Sbjct: 116 GLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSG 151
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 313/590 (53%), Gaps = 39/590 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGY-- 81
A +F +P N + MI G+ R LY+ M R D L G+
Sbjct: 92 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151
Query: 82 ---LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
L+ GR + + + ++ +V ++V Y G++ AR +FD P+ +V+ W
Sbjct: 152 DIALEYGR-QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM 210
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ Y KV FE+ LFL M + ++TL ++ AC + R G +VH V
Sbjct: 211 IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCK 270
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ +++L N++I MY G E++ A +F
Sbjct: 271 VESNLVLENAMIDMYADCG-------------------------------EMDSALGIFR 299
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
M +D +SWTT+++GF++ G ++ + F+ MPEKD V+WTA+I G++ + +++EA
Sbjct: 300 SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALEL 359
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F M +V+P++ T+ SVL+A A L G I ++ + +++D+ ++N+L+ +Y K
Sbjct: 360 FRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFK 419
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG+V A IF + +R+ ++ +MI G A NG GE+AL++F M ++P++IT++ V
Sbjct: 420 CGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGV 479
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSAC H GLV++G YF M + + IEP HY C+VD+L RAG L EA ++I +M +
Sbjct: 480 LSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKA 539
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
VWGALL R + D+A++ + ++ELEPD+ YV+L ++Y+ + D +R
Sbjct: 540 NSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQ 599
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K I+K PGCS I + +VH F+AG +S K I+ L +++ K
Sbjct: 600 MMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLK 649
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 7/219 (3%)
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G+ + + LF+ +PE + W +I G+ + + ++EMLR+ V+P++ T +
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
L G Q+H HV+K ++ +V + +LV +Y CG + A +F + +++
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 206
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---FIYF 455
++N +IS + + G EE+ LF M+D+ ++P +T + VLSAC+ + + G Y
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
K+ K +E M+D+ G + A+ + SM
Sbjct: 267 KNCK----VESNLVLENAMIDMYADCGEMDSALGIFRSM 301
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYL 82
+A IF M R+ ++ AMI G G +A +++ NM + D + ++S
Sbjct: 425 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 484
Query: 83 KVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAW 136
G ++ + F M +E ++ +G +VD + GR+ EA E+ + MP K N + W
Sbjct: 485 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVW 544
Query: 137 TAMVDG---YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
A++ G Y + D E L + A + L ++ AC R+ RE Q+
Sbjct: 545 GALLAGCRVYRESDMAEMVVKQILELEPDNGAV-YVLLCNIYAACKRWNDLRELRQM 600
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL--YSKCGNVVDAYRIFTNIDE 394
++S +++Q Q+H +K + ++ +QN +++ + G+ A R+F I E
Sbjct: 42 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 101
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
N+ +N+MI G+++ + ++L+ +M G+ P++ TF
Sbjct: 102 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTF 142
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/623 (29%), Positives = 320/623 (51%), Gaps = 71/623 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +++ SY M+ AL+ S+ +A E++ P+ + + AMI+GFVR + +A +
Sbjct: 175 MPEKSVVSYTTMVDALMKRG-SVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFPV 233
Query: 61 YVNM-PARWRDSVCS-------------------------------------NALISGYL 82
+ M R +V + N+LI+ YL
Sbjct: 234 FRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYL 293
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
++G A R+F+ M +DVV+W +++D Y G + AR + D MP +N V+W ++
Sbjct: 294 RMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLDAMPARNEVSWGTLIAR 353
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + + L+ M G N + + AC R G ++H + G +
Sbjct: 354 HEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTN 413
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ + +S+I MY + + A R+F +P
Sbjct: 414 LFVSSSLIDMYCKCK-------------------------------QCTYAQRVFNSLPE 442
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K+ V W ++I+G+S G + ++ LFN MP ++ V+W +ISG+ N ++ +A +F M
Sbjct: 443 KNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAM 502
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L P ++TLSSVL A A +L G +HA +VK+ +E ++ + +L +Y+K G++
Sbjct: 503 LASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDL 562
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ R+F + E+N +++ +M+ G A+NG EE+++LF M + G+ PN+ TFL++L AC
Sbjct: 563 DSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFAC 622
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVE+ YF++M+ + I P +HY CMVD+L RAG L EA +L+ ++ E
Sbjct: 623 SHCGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSS 681
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W +LL A T+ N ++ + AA+ L ELE D+ YV+LS++Y+ GK +D R+ +
Sbjct: 682 WSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQG 741
Query: 563 KRIRKSPGCSWIILKDKVHLFLA 585
++K GCSW+ L+ + H F +
Sbjct: 742 ASLKKDAGCSWLQLRGQYHAFFS 764
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 210/424 (49%), Gaps = 71/424 (16%)
Query: 68 WRDSVCSNA--------LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
+RD V ++A ++S ++K G A R+F M EK VV++ +MVD K+G V
Sbjct: 138 FRDCVAADAASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVR 197
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+A E++++ P +V +TAM+ G+++ + +D F +F M + N +TL + +AC
Sbjct: 198 DAVELYERCPLHSVAFFTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACV 257
Query: 180 RFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ + V GL + F+ I + NS+IT+Y R+G A++VF M RD VSW
Sbjct: 258 GAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWT 317
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
+L+ Y G++ A R+ + MP ++ VSW T+I KG+ ++++L++
Sbjct: 318 ALLDVYADLGDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYS--------- 368
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
+ML RPN SSVLSA A L G++IHA+ +
Sbjct: 369 ----------------------QMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANAL 406
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE------------------------ 394
KM +++ + +SL+ +Y KC A R+F ++ E
Sbjct: 407 KMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEG 466
Query: 395 -------RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
RN VS+N+MISG+A+N +ALN F M G +P +IT SVL AC ++
Sbjct: 467 LFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCS 526
Query: 448 VEEG 451
+E G
Sbjct: 527 LEMG 530
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 35/290 (12%)
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS---WNSLISGY 244
+ +H R G D + ++++T Y + ++ F DA S ++ ++S +
Sbjct: 100 LSLHAHAFRSGLTADRSVASNLLTAYAAFTRAADRDQAFRDCVAADAASSFTYDFMVSEH 159
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
V G+I A RLF MP K VS+TTM+ +G++ ++EL+ P +TA+IS
Sbjct: 160 VKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMIS 219
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM-E 363
GFV NE +++AF F +ML VRPN +TL V+ A + + VK N+ E
Sbjct: 220 GFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFE 279
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA--------------- 408
+ + NSL++LY + G+ A+R+F +++ R++VS+ +++ +A
Sbjct: 280 KSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLDAM 339
Query: 409 ----------------QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
Q G EAL L+ +M +G PN F SVLSAC
Sbjct: 340 PARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSAC 389
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/623 (29%), Positives = 320/623 (51%), Gaps = 71/623 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +++ SY M+ AL+ S+ +A E++ P+ + + AMI+GFVR + +A +
Sbjct: 175 MPEKSVVSYTTMVDALMKRG-SVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTV 233
Query: 61 YVNM-PARWRDSVCS-------------------------------------NALISGYL 82
+ M R +V + N+LI+ YL
Sbjct: 234 FRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYL 293
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
++G A R+F+ M +DVV+W +++D Y G + AR + D MP +N V+W ++
Sbjct: 294 RMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLDAMPARNEVSWGTLIAR 353
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + + L+ M G N + + AC R G ++H + G +
Sbjct: 354 HEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTN 413
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ + +S+I MY + + A R+F +P
Sbjct: 414 LFVSSSLIDMYCKCK-------------------------------QCTYAQRVFNSLPE 442
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K+ V W ++I+G+S G + ++ LFN MP ++ V+W +ISG+ N ++ +A +F M
Sbjct: 443 KNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAM 502
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L P ++TLSSVL A A +L G +HA +VK+ +E ++ + +L +Y+K G++
Sbjct: 503 LASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDL 562
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ R+F + E+N +++ +M+ G A+NG EE+++LF M + G+ PN+ TFL++L AC
Sbjct: 563 DSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFAC 622
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVE+ YF++M+ + I P +HY CMVD+L RAG L EA +L+ ++ E
Sbjct: 623 SHCGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSS 681
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W +LL A T+ N ++ + AA+ L ELE D+ YV+LS++Y+ GK +D R+ +
Sbjct: 682 WSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQG 741
Query: 563 KRIRKSPGCSWIILKDKVHLFLA 585
++K GCSW+ L+ + H F +
Sbjct: 742 ASLKKDAGCSWLQLRGQYHAFFS 764
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 222/457 (48%), Gaps = 72/457 (15%)
Query: 68 WRDSVCSNA--------LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
+RD V ++A ++S ++K G A R+F M EK VV++ +MVD K+G V
Sbjct: 138 FRDCVAADAASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVR 197
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+A E++++ P +V +TAM+ G+++ + +D F +F M + N +TL + +AC
Sbjct: 198 DAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACV 257
Query: 180 RFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ + V GL + F+ I + NS+IT+Y R+G A +VF M RD VSW
Sbjct: 258 GAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWT 317
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
+L+ Y G+++ A R+ + MP ++ VSW T+I KG+ ++++L++
Sbjct: 318 ALLDVYADLGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYS--------- 368
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
+ML RPN SSVLSA A L G++IHA+ +
Sbjct: 369 ----------------------QMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANAL 406
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE------------------------ 394
KM +++ + +SL+ +Y KC A R+F ++ E
Sbjct: 407 KMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEG 466
Query: 395 -------RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
RN VS+N+MISG+A+N +ALN F M G +P +IT SVL AC ++
Sbjct: 467 LFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCS 526
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
+E G + + L IE + D+ ++G L
Sbjct: 527 LEMGRMVHAEIVKL-GIEDNIFMGTALCDMYAKSGDL 562
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 35/290 (12%)
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS---WNSLISGY 244
+ +H R G D + ++++T Y + ++ F DA S ++ ++S +
Sbjct: 100 LSLHAHALRSGLATDRSVASNLLTAYAAFARAGDRDQAFRDCVAADAASSFTYDFMVSEH 159
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
V G+I A RLF MP K VS+TTM+ +G++ ++EL+ P +TA+IS
Sbjct: 160 VKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMIS 219
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM-E 363
GFV NE +++AF F +ML VRPN +TL V+ A + + VK N+ E
Sbjct: 220 GFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFE 279
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA--------------- 408
+ + NSL++LY + G+ A R+F +++ R++VS+ +++ +A
Sbjct: 280 KSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLDAM 339
Query: 409 ----------------QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
Q G EAL L+ +M +G PN F SVLSAC
Sbjct: 340 PARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSAC 389
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 279/496 (56%), Gaps = 37/496 (7%)
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
++ E+FD+MPE +V++ T ++ + + +E+ LF M + N T + +
Sbjct: 50 MDVDELFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSS 109
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G Q+H + G + + +G++++ Y +L +EA F + K + VS+
Sbjct: 110 TGLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYT 169
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
+LI GY+ G+I++A +LF+ MP ++ VSW M+ GFS G+ E+++ L
Sbjct: 170 TLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSL----------- 218
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
FIEMLR+ PNQ T ++++A A+L G HA V
Sbjct: 219 --------------------FIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACAV 258
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K SDV + NSLVS Y+KCG++ D+ +F + +RN VS+N++I GFAQNG GE+A+
Sbjct: 259 KSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDAVI 318
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG---PEHYACMV 475
F +M+ GL PN +T L +L ACNH GLVE+G++YF M+ EPG PEHYACMV
Sbjct: 319 FFERMRAAGLRPNSVTLLGLLCACNHAGLVEKGYMYFNQMR---QEEPGILKPEHYACMV 375
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D+L R G L EA ++ + F+P G W ALLG H N +L+ LAAQ ++ L+P+ +
Sbjct: 376 DLLSRFGRLKEAAKFLHDLPFDPGTGFWKALLGGCHIHSNAELSDLAAQKILALDPEDVS 435
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
YV+LS+ YS G+ + + +R + K K +++ PGCSWI ++ K+H+FL K+ +E
Sbjct: 436 SYVMLSNAYSAAGRWQQVSTIRREMKEKGLKRIPGCSWIEVRSKIHVFLNSDKNHHQKEE 495
Query: 596 IEVTLQTISKGTKEFD 611
I L+ + +E +
Sbjct: 496 IYSFLKFCVEQLREIE 511
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 119/225 (52%), Gaps = 4/225 (1%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+A++ Y K+ EEA FE + + +VV++ +++ GY KKG++ +A ++F +MPE+NVV
Sbjct: 138 SAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVV 197
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W AMV G+ ++ E+ LF+ M R G N T + G H
Sbjct: 198 SWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACA 257
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ D+ + NS+++ Y + G M+++ VF+ + R+ VSWN++I G+ NG E+A
Sbjct: 258 VKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDAV 317
Query: 255 RLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
FERM V+ ++ + G +EK FN M +++
Sbjct: 318 IFFERMRAAGLRPNSVTLLGLLCACNHAGLVEKGYMYFNQMRQEE 362
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 157/368 (42%), Gaps = 69/368 (18%)
Query: 21 CSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISG 80
CS EA F + N VSY +I G++++G +A +L+ MP R+ V NA++ G
Sbjct: 148 CSFEEARNAFEDIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPE--RNVVSWNAMVGG 205
Query: 81 YLKVGRCEEAARIF---------------------------------------EAMVEKD 101
+ ++G EEA +F +++ D
Sbjct: 206 FSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCTSD 265
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
V S+V Y K G + ++ +F+++P++N V+W A++ G+ + ED F MR
Sbjct: 266 VFVCNSLVSFYAKCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRA 325
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN----SIITMYGRLG 217
G+ NS+TL L AC +G + + + IL ++ + R G
Sbjct: 326 AGLRPNSVTLLGLLCACNHAGLVEKGYMYFNQMRQ---EEPGILKPEHYACMVDLLSRFG 382
Query: 218 FMDEANKVFSMMSKRDAVS-WNSLISG-YVH-NGEIEE--AYRLFERMPGKDFVSWTTMI 272
+ EA K + W +L+ G ++H N E+ + A ++ P +D S+ +
Sbjct: 383 RLKEAAKFLHDLPFDPGTGFWKALLGGCHIHSNAELSDLAAQKILALDP-EDVSSYVMLS 441
Query: 273 TGFSSKGNLEKSIELFNMMPEK-----DDVTWTAI---ISGFVNNE----QYEEAF---R 317
+S+ G ++ + M EK +W + I F+N++ Q EE + +
Sbjct: 442 NAYSAAGRWQQVSTIRREMKEKGLKRIPGCSWIEVRSKIHVFLNSDKNHHQKEEIYSFLK 501
Query: 318 WFIEMLRK 325
+ +E LR+
Sbjct: 502 FCVEQLRE 509
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 328/646 (50%), Gaps = 49/646 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS-- 79
++ A IF+ M R+AV+Y +I G + G +A EL+ M + SN L S
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD-SNTLASLV 396
Query: 80 ------GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
G L G+ A + + G++++ Y K + A + F + +NV
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIE-GALLNLYAKCADIETALDYFLETEVENV 455
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V W M+ Y +D + F +F M+ + N T + + C R G Q+H
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ + F + + + +I MY +LG +D A + + +D VSW ++I+GY ++A
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 254 YRLFERMPGK----DFVSWT---------------------TMITGFSSK---------- 278
F +M + D V T ++GFSS
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 279 ----GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
G +E+S F D++ W A++SGF + EEA R F+ M R+ + N T
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S + A++ TA + QG Q+HA + K +S+ + N+L+S+Y+KCG++ DA + F +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+N VS+N++I+ ++++G G EAL+ F +M + PN +T + VLSAC+H+GLV++G Y
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F+SM + Y + P PEHY C+VD+L RAG L+ A + I M +P VW LL A H
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
N+++ + AA HL+ELEP+ + YV+LS+LY+V K + R K K K ++K PG SWI
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 575 ILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
+K+ +H F G ++ EI Q ++K E + + +SLL
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLL 981
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 226/479 (47%), Gaps = 54/479 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN-ALISGY 81
+Y AF++F MP R ++ MI R + E L+V M + ++V N SG
Sbjct: 136 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS---ENVTPNEGTFSGV 192
Query: 82 LKVGRC---------EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
L+ R + ARI + V ++D Y + G V AR +FD + K+
Sbjct: 193 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+W AM+ G K +C + LF M G+ + + AC + G Q+HG
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
LV + GF D + N+++++Y LG + A +FS MS+RDAV++N+LI+G G E+
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372
Query: 253 AYRLFERMP--------------------------GKDFVSWTTMITGFSSK-------- 278
A LF+RM G+ ++TT + GF+S
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALL 431
Query: 279 ------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++E +++ F ++ V W ++ + + +FR F +M +++ PNQ
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S+L L G QIH+ ++K N + + + + L+ +Y+K G + A+ I
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+++VS+ +MI+G+ Q ++AL FR+M D G+ +++ + +SAC + ++EG
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 235/512 (45%), Gaps = 56/512 (10%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALI 78
A +F + +++ S+ AMI+G + EA L+ +M P + SV S
Sbjct: 241 ARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK 300
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
L++G + + + D ++V Y G +I A IF M +++ V +
Sbjct: 301 IESLEIGE-QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNT 359
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC---GRFFRYREGVQVHGLVS 195
+++G + E +LF M G+ +S TL L AC G FR G Q+H +
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR---GQQLHAYTT 416
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ GF + + +++ +Y + ++ A F + V WN ++ Y ++ ++R
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 256 LFERMPGKDFVS---------------------------------------WTTMITGFS 276
+F +M ++ V + +I ++
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G L+ + ++ KD V+WT +I+G+ ++A F +ML + +R +++ L++
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+SA A L +G QIHA SD+ QN+LV+LYS+CG + ++Y F + +
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYF 455
+++N+++SGF Q+G EEAL +F +M EG+ N TF S + A + +++G ++
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 716
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
KT Y+ E E ++ + + GS+++A
Sbjct: 717 VITKTGYDSE--TEVCNALISMYAKCGSISDA 746
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 225/489 (46%), Gaps = 54/489 (11%)
Query: 77 LISGYLKV-GRCEEAARIFEAMVEKDVVAWG----SMVDGYCKKGRVIEAREIFDKMPEK 131
L+ G LK G +E ++ +++ + + G + D Y KG + A ++FD+MPE+
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYREGVQV 190
+ W M+ + + F LF+ M + N T + + EAC G + Q+
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + G ++ N +I +Y R GF+D A +VF + +D SW ++ISG N
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 251 EEAYRLF-------------------------ERMPGKDFVSWTTMITGFSSK------- 278
EA RLF E + + + + GFSS
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 279 -------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
GNL + +F+ M ++D VT+ +I+G E+A F M + P+
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
TL+S++ A +A TL +G Q+HA+ K+ S+ I+ +L++LY+KC ++ A F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ N+V +N M+ + + +FR+M+ E +VPNQ T+ S+L C +G +E G
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 452 -FIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
I+ + +KT + + Y C ++D+ + G L A D++ + F V +
Sbjct: 510 EQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMI 563
Query: 509 AGRTHLNLD 517
AG T N D
Sbjct: 564 AGYTQYNFD 572
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 155/335 (46%), Gaps = 41/335 (12%)
Query: 158 SMRRGGMAFNSITLTILFEACGRFF-RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
S+ G+ N TL L E C + EG ++H + + G D + L + Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----------- 265
G + A KVF M +R +WN +I I E + LF RM ++
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 266 -----------------------------VSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
V +I +S G ++ + +F+ + KD
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+W A+ISG NE EA R F +M + P SSVLSA +L G Q+H
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
V+K+ SD + N+LVSLY GN++ A IF+N+ +R+ V+YN++I+G +Q G GE+A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ LF++M +GL P+ T S++ AC+ G + G
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 17/267 (6%)
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
KG+L + ++F+ MPE+ TW +I + E F F+ M+ ++V PN+ T S V
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 338 LSAS-AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
L A + + QIHA ++ + + N L+ LYS+ G V A R+F + ++
Sbjct: 193 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
S+ +MISG ++N EA+ LF M G++P F SVLSAC + +E G +
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG---EQ 309
Query: 457 SMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL------G 508
+ + + Y C +V + G+L A + ++M+ + + L+ G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCG 368
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSAT 535
G + L HL LEPDS T
Sbjct: 369 YGEKAMEL----FKRMHLDGLEPDSNT 391
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 272/469 (57%), Gaps = 1/469 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACG 179
AR +F + +V + ++ G D + LF+ MRR +A +S + L +A
Sbjct: 58 ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
G+Q+H L +G D + +G ++I+MY + A KVF M + + V+WN+
Sbjct: 118 NCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNA 177
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+++ +++A ++F MP ++ SW M+ G++ G L+ + E+F MP KDDV+W
Sbjct: 178 IVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSW 237
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+ +I GF +N + +AF +F E+ R+ +RPN+++L+ VLSA A G +H V K
Sbjct: 238 STMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEK 297
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+S+ N+L+ YSKCGN+ A +F N+ R+ VS+ +MI+G A +G GEEA+ L
Sbjct: 298 SGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRL 357
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F +M++ + P+ ITF+S+L AC+H GLV+ G YF M Y IEP EHY CMVD+ G
Sbjct: 358 FNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYG 417
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L +A D + M P VW LLGA H NL LA + L EL+P+++ +V+
Sbjct: 418 RAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVL 477
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
LS++Y+V GK +D +R +R++K+PG S I + ++ F+AG K
Sbjct: 478 LSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEK 526
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 180/370 (48%), Gaps = 25/370 (6%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NA+++ + ++A ++F M +++ +W M+ GY K G + ARE+F KMP K+ V
Sbjct: 176 NAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDV 235
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W+ M+ G+ F D F F +RR GM N ++LT + AC + + G +HG V
Sbjct: 236 SWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFV 295
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ GF I + N++I Y + G +D A VF M +R AVSW ++I+G +G EEA
Sbjct: 296 EKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAI 355
Query: 255 RLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISG 305
RLF M D +++ +++ S G ++ F+ M + + ++
Sbjct: 356 RLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDL 415
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES- 364
+ + ++A+ + +M + PN + ++L A + L Q+ + +++ E+
Sbjct: 416 YGRAGKLQQAYDFVCQM---PISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENS 472
Query: 365 -DVSIQNSLVSLYSKCGNVVDAYRIFTN----------IDERNIVSYNSMISGFAQNGLG 413
D + +++ ++ K +V R T+ + E N + Y S ++G QN +
Sbjct: 473 GDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIY-SFVAGEKQNDIA 531
Query: 414 EEALNLFRKM 423
EA R++
Sbjct: 532 VEAHQKLREI 541
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 132/320 (41%), Gaps = 79/320 (24%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ Y + ++ AR++FD+M E N+VAW A+V + + +D +F M
Sbjct: 146 TLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCM------- 198
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ L S ++I+L Y + G + A +VF
Sbjct: 199 ----------------------PIRNLTS-----WNIMLAG-----YTKAGELQLAREVF 226
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWT------------- 269
M +D VSW+++I G+ HNG +A+ F + + VS T
Sbjct: 227 MKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFE 286
Query: 270 ----------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
+I +S GNL+ + +F+ M + V+WTA+I+G
Sbjct: 287 FGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMA 346
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM-NMESDV 366
+ EEA R F EM +++P+ +T S+L A + ++ G + +V +E +
Sbjct: 347 MHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVI 406
Query: 367 SIQNSLVSLYSKCGNVVDAY 386
+V LY + G + AY
Sbjct: 407 EHYGCMVDLYGRAGKLQQAY 426
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 120/291 (41%), Gaps = 44/291 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + ++NA++ A + +A ++F MP+RN S+ M+ G+ + G A E+
Sbjct: 167 MIEPNIVAWNAIVAACFRCE-GVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREV 225
Query: 61 YVNMPARWRDSVCSNALISGYLKVGR-----------------------------CEEA- 90
++ MP +D V + +I G+ G C +A
Sbjct: 226 FMKMP--LKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAG 283
Query: 91 ----ARIFEAMVEKD-----VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
RI VEK + +++D Y K G + AR +FD M ++ V+WTAM+
Sbjct: 284 AFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIA 343
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LVSRFGFD 200
G E+ LF M + +SIT + AC G +V+ +G +
Sbjct: 344 GMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIE 403
Query: 201 YDIILGNSIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEI 250
I ++ +YGR G + +A + V M + + W +L+ +G +
Sbjct: 404 PVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNL 454
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 340/648 (52%), Gaps = 57/648 (8%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATM----------PMRNAVSYAAMITGFVRRGM 53
R + SYNAMITA + N + A +F M + +S ++I R
Sbjct: 102 RDTVSYNAMITAYSHGN-DGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQ 160
Query: 54 FYEAEELYVNMPARWRDSVCSNALISGYLKVGRCE---------EAARIFEAMVEKDVV- 103
E + + SV +NAL+S Y+ A ++F+ + +
Sbjct: 161 MLHCE--VIKLGTLLIPSV-TNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYE 217
Query: 104 -AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
+W +M+ GY + ++ ARE+ D + VAW AM+ GY++ +E+ FD F M
Sbjct: 218 PSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSM 277
Query: 163 GMAFNSITLTILFEACG----RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
G+ + T T L ACG + + G QVHG + R +++
Sbjct: 278 GIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILR-----------TVV-------- 318
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
E + F + N+LI+ Y + EA R+F++MP +D +SW +++G+ +
Sbjct: 319 --EPSHHFVLSVN------NALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNA 370
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+E++ +F+ MPE++ +TWT +ISG N EE + F +M + + P + +
Sbjct: 371 QRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAI 430
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+A + +L+ G QIH+ V+++ +S +S N+L+++YS+CG V A +F + + V
Sbjct: 431 TACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSV 490
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N+MI+ AQ+G G +A+ LF +M E ++P++ITFL++L+ACNH GL++EG YF +M
Sbjct: 491 SWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTM 550
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
T Y I PG +HYA ++D+L RAG +A +I SM FE +W ALL R H N++L
Sbjct: 551 CTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMEL 610
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
AA L+EL P Y++LS++Y+ +G+ + RVR+ + + ++K PGCSW+ +++
Sbjct: 611 GIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVEN 670
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
VH+FL +++ + LQ + K+ + P + L +E +
Sbjct: 671 MVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESE 718
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 189/435 (43%), Gaps = 95/435 (21%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A I + + + +++ YCK + AR++FDK+P+ ++VA T ++ Y
Sbjct: 29 AHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSG--- 85
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+++ FN+ LTI R+ V + +++ + D ++
Sbjct: 86 -------NVKLAQQLFNATPLTI-----------RDTVSYNAMITAYSHGNDGHAALNLF 127
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVS------------------------WNSLISGYVH 246
R GF+ + S++S ++ N+L+S YV
Sbjct: 128 VQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVC 187
Query: 247 NGE---------IEEAYRLFERMPGKDFV--SWTTMITGFSSKGNLEKSIELFNMMPEKD 295
+ A ++F+ P SWTTMI G+ +L + EL + +
Sbjct: 188 CASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPI 247
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT----ATLNQGS 351
DV W A+ISG+V YEEAF F M ++ ++ T +S++SA + N G
Sbjct: 248 DVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGR 307
Query: 352 QIHAHVVKMNMESD----VSIQNSLVSLYSKCGNVVDAYR-------------------- 387
Q+H ++++ +E +S+ N+L++ Y+K +++A R
Sbjct: 308 QVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGY 367
Query: 388 -----------IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
IF+ + ERN++++ MISG AQNG GEE L LF +MK EGL P F
Sbjct: 368 VNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFA 427
Query: 437 SVLSACNHVGLVEEG 451
++AC+ +G ++ G
Sbjct: 428 GAITACSVLGSLDNG 442
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 33/122 (27%)
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE------------------ 394
+HAH++ + + I N L+++Y K N+ A ++F I +
Sbjct: 27 VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGN 86
Query: 395 ---------------RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
R+ VSYN+MI+ ++ G ALNLF +MK G +P+ TF SVL
Sbjct: 87 VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVL 146
Query: 440 SA 441
SA
Sbjct: 147 SA 148
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 328/646 (50%), Gaps = 49/646 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS-- 79
++ A IF+ M R+AV+Y +I G + G +A EL+ M + SN L S
Sbjct: 298 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD-SNTLASLV 356
Query: 80 ------GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
G L G+ A + + G++++ Y K + A + F + +NV
Sbjct: 357 VACSADGTLFRGQQLHAYTTKLGFASNNKIE-GALLNLYAKCADIETALDYFLETEVENV 415
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V W M+ Y +D + F +F M+ + N T + + C R G Q+H
Sbjct: 416 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 475
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ + F + + + +I MY +LG +D A + + +D VSW ++I+GY ++A
Sbjct: 476 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 535
Query: 254 YRLFERMPGK----DFVSWT---------------------TMITGFSSK---------- 278
F +M + D V T ++GFSS
Sbjct: 536 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 595
Query: 279 ----GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
G +E+S F D++ W A++SGF + EEA R F+ M R+ + N T
Sbjct: 596 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 655
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S + A++ TA + QG Q+HA + K +S+ + N+L+S+Y+KCG++ DA + F +
Sbjct: 656 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 715
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+N VS+N++I+ ++++G G EAL+ F +M + PN +T + VLSAC+H+GLV++G Y
Sbjct: 716 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 775
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F+SM + Y + P PEHY C+VD+L RAG L+ A + I M +P VW LL A H
Sbjct: 776 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 835
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
N+++ + AA HL+ELEP+ + YV+LS+LY+V K + R K K K ++K PG SWI
Sbjct: 836 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 895
Query: 575 ILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
+K+ +H F G ++ EI Q ++K E + + +SLL
Sbjct: 896 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLL 941
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 226/479 (47%), Gaps = 54/479 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN-ALISGY 81
+Y AF++F MP R ++ MI R + E L+V M + ++V N SG
Sbjct: 96 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS---ENVTPNEGTFSGV 152
Query: 82 LKVGRC---------EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
L+ R + ARI + V ++D Y + G V AR +FD + K+
Sbjct: 153 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 212
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+W AM+ G K +C + LF M G+ + + AC + G Q+HG
Sbjct: 213 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 272
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
LV + GF D + N+++++Y LG + A +FS MS+RDAV++N+LI+G G E+
Sbjct: 273 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 332
Query: 253 AYRLFERMP--------------------------GKDFVSWTTMITGFSSK-------- 278
A LF+RM G+ ++TT + GF+S
Sbjct: 333 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALL 391
Query: 279 ------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++E +++ F ++ V W ++ + + +FR F +M +++ PNQ
Sbjct: 392 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 451
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S+L L G QIH+ ++K N + + + + L+ +Y+K G + A+ I
Sbjct: 452 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 511
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+++VS+ +MI+G+ Q ++AL FR+M D G+ +++ + +SAC + ++EG
Sbjct: 512 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 570
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 235/512 (45%), Gaps = 56/512 (10%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALI 78
A +F + +++ S+ AMI+G + EA L+ +M P + SV S
Sbjct: 201 ARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK 260
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
L++G + + + D ++V Y G +I A IF M +++ V +
Sbjct: 261 IESLEIGE-QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNT 319
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC---GRFFRYREGVQVHGLVS 195
+++G + E +LF M G+ +S TL L AC G FR G Q+H +
Sbjct: 320 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR---GQQLHAYTT 376
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ GF + + +++ +Y + ++ A F + V WN ++ Y ++ ++R
Sbjct: 377 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 436
Query: 256 LFERMPGKDFVS---------------------------------------WTTMITGFS 276
+F +M ++ V + +I ++
Sbjct: 437 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 496
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G L+ + ++ KD V+WT +I+G+ ++A F +ML + +R +++ L++
Sbjct: 497 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 556
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+SA A L +G QIHA SD+ QN+LV+LYS+CG + ++Y F + +
Sbjct: 557 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGD 616
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYF 455
+++N+++SGF Q+G EEAL +F +M EG+ N TF S + A + +++G ++
Sbjct: 617 NIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 676
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
KT Y+ E E ++ + + GS+++A
Sbjct: 677 VITKTGYDSE--TEVCNALISMYAKCGSISDA 706
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 225/489 (46%), Gaps = 54/489 (11%)
Query: 77 LISGYLKV-GRCEEAARIFEAMVEKDVVAWG----SMVDGYCKKGRVIEAREIFDKMPEK 131
L+ G LK G +E ++ +++ + + G + D Y KG + A ++FD+MPE+
Sbjct: 50 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 109
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYREGVQV 190
+ W M+ + + F LF+ M + N T + + EAC G + Q+
Sbjct: 110 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 169
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + G ++ N +I +Y R GF+D A +VF + +D SW ++ISG N
Sbjct: 170 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 229
Query: 251 EEAYRLF-------------------------ERMPGKDFVSWTTMITGFSSK------- 278
EA RLF E + + + + GFSS
Sbjct: 230 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 289
Query: 279 -------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
GNL + +F+ M ++D VT+ +I+G E+A F M + P+
Sbjct: 290 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 349
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
TL+S++ A +A TL +G Q+HA+ K+ S+ I+ +L++LY+KC ++ A F
Sbjct: 350 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 409
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ N+V +N M+ + + +FR+M+ E +VPNQ T+ S+L C +G +E G
Sbjct: 410 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 469
Query: 452 -FIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
I+ + +KT + + Y C ++D+ + G L A D++ + F V +
Sbjct: 470 EQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMI 523
Query: 509 AGRTHLNLD 517
AG T N D
Sbjct: 524 AGYTQYNFD 532
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 155/335 (46%), Gaps = 41/335 (12%)
Query: 158 SMRRGGMAFNSITLTILFEACGRFF-RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
S+ G+ N TL L E C + EG ++H + + G D + L + Y
Sbjct: 34 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 93
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----------- 265
G + A KVF M +R +WN +I I E + LF RM ++
Sbjct: 94 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 153
Query: 266 -----------------------------VSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
V +I +S G ++ + +F+ + KD
Sbjct: 154 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 213
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+W A+ISG NE EA R F +M + P SSVLSA +L G Q+H
Sbjct: 214 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 273
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
V+K+ SD + N+LVSLY GN++ A IF+N+ +R+ V+YN++I+G +Q G GE+A
Sbjct: 274 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 333
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ LF++M +GL P+ T S++ AC+ G + G
Sbjct: 334 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 368
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 17/267 (6%)
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
KG+L + ++F+ MPE+ TW +I + E F F+ M+ ++V PN+ T S V
Sbjct: 93 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 152
Query: 338 LSAS-AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
L A + + QIHA ++ + + N L+ LYS+ G V A R+F + ++
Sbjct: 153 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 212
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
S+ +MISG ++N EA+ LF M G++P F SVLSAC + +E G +
Sbjct: 213 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG---EQ 269
Query: 457 SMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL------G 508
+ + + Y C +V + G+L A + ++M+ + + L+ G
Sbjct: 270 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCG 328
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSAT 535
G + L HL LEPDS T
Sbjct: 329 YGEKAMEL----FKRMHLDGLEPDSNT 351
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 325/633 (51%), Gaps = 48/633 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA----RWRDSVCSNAL---- 77
A +F M ++ +S+ +I+G+V EA L+ NM R + S A
Sbjct: 68 ARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACG 127
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
++ + G + +V V +++D Y K G++ E R +F +MP +NVV+WT
Sbjct: 128 LNSDVNYGELLHGYAVKTGLV-NSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWT 186
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
A++ G ++ ++ F M R + ++S T I +AC G ++H +
Sbjct: 187 AIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKK 246
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
GFD + N++ TMY + G ++ +F MS RD VSW ++I+ V G+ E A + F
Sbjct: 247 GFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAF 306
Query: 258 ERMPGKDF-------------------VSW--------------------TTMITGFSSK 278
RM D + W +++T ++
Sbjct: 307 IRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G L S +F+ M +D V+W+ II+G+ EAF M + +P + L+SVL
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA A L G Q+HA+V+ + +E + ++L+++Y KCG++ +A RIF + +IV
Sbjct: 427 SACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIV 486
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+ +MI+G+A++G E ++LF K+ GL P+ +TF+ VLSAC+H GLV+ GF YF +M
Sbjct: 487 SWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAM 546
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
Y I P EHY CM+D+L RAG L++A +I +M F VW LL A R H +++
Sbjct: 547 SKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVER 606
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+ A+ +++LEP+ A ++ L+++Y+ GK R+ +R K K + K PG SWI +KD
Sbjct: 607 GRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKD 666
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD 611
V F+AG +S ++I L ++ T+ D
Sbjct: 667 LVFAFVAGDRSHPQGEDIYNMLDLLASRTELAD 699
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 234/476 (49%), Gaps = 56/476 (11%)
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLT 172
K G + AR +FDKM +K+ ++WT ++ GY+ + + LF +MR G+ + L+
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ +ACG G +HG + G + +G++++ MY + G + E +VF M R
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM-------------------------------- 260
+ VSW ++I+G V G +EA F M
Sbjct: 181 NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 240
Query: 261 -----PGKDFVSWT--TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
G D S+ T+ T ++ G LE + LF M +D V+WT II+ V Q E
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A + FI M DV PN+ T ++V+S A A + G Q+HA ++ + + + +S++NS++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
++Y+KCG + + IF + R+IVS++++I+G+ Q G EA L M+ EG P +
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEF 420
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA----CMVDILGRAGSLAEAID 489
SVLSAC ++ ++E G K + Y + G EH A ++++ + GS+ EA
Sbjct: 421 ALASVLSACGNMAILEHG----KQLHA-YVLSIGLEHTAMVLSALINMYCKCGSIEEASR 475
Query: 490 LINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
+ ++ + W A++ G + +DL + + + L PDS T VLS
Sbjct: 476 IFDAAENDDIVS-WTAMINGYAEHGYSREVIDLFEKIPR--VGLRPDSVTFIGVLS 528
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 71/303 (23%)
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG 279
D ++ +S+ D N + V G + A R+F++M KD +SWTT+I+G+ +
Sbjct: 35 DNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNAN 94
Query: 280 NLEKSIELF-NMMPEK-------------------DDVTWT------AIISGFVN----- 308
+ +++ LF NM E DV + A+ +G VN
Sbjct: 95 DSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVG 154
Query: 309 ---------NEQYEEAFRWFIEMLRKD-------------------------------VR 328
N + E R F EM ++ V
Sbjct: 155 SALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVE 214
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ T + L A A + LN G +IHA +K + + N+L ++Y+KCG + +
Sbjct: 215 YDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTL 274
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + R++VS+ ++I+ Q G E A+ F +M++ + PN+ TF +V+S C ++ +
Sbjct: 275 FEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARI 334
Query: 449 EEG 451
E G
Sbjct: 335 EWG 337
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 325/633 (51%), Gaps = 48/633 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA----RWRDSVCSNAL---- 77
A +F M ++ +S+ +I+G+V EA L+ NM R + S A
Sbjct: 68 ARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACG 127
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
++ + G + +V V +++D Y K G++ E R +F +MP +NVV+WT
Sbjct: 128 LNSDVNYGELLHGYAVKTGLV-NSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWT 186
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
A++ G ++ ++ F M R + ++S T I +AC G ++H +
Sbjct: 187 AIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKK 246
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
GFD + N++ TMY + G ++ +F MS RD VSW ++I+ V G+ E A + F
Sbjct: 247 GFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAF 306
Query: 258 ERMPGKDF-------------------VSW--------------------TTMITGFSSK 278
RM D + W +++T ++
Sbjct: 307 IRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G L S +F+ M +D V+W+ II+G+ EAF M + +P + L+SVL
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA A L G Q+HA+V+ + +E + ++L+++Y KCG++ +A RIF + +IV
Sbjct: 427 SACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIV 486
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+ +MI+G+A++G E ++LF K+ GL P+ +TF+ VLSAC+H GLV+ GF YF +M
Sbjct: 487 SWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAM 546
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
Y I P EHY CM+D+L RAG L++A +I +M F VW LL A R H +++
Sbjct: 547 SKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVER 606
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+ A+ +++LEP+ A ++ L+++Y+ GK R+ +R K K + K PG SWI +KD
Sbjct: 607 GRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKD 666
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD 611
V F+AG +S ++I L ++ T+ D
Sbjct: 667 LVFAFVAGDRSHPQGEDIYNMLDLLASRTELAD 699
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 235/476 (49%), Gaps = 56/476 (11%)
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLT 172
K G + AR +FDKM +K+ ++WT ++ GY+ + + LF +MR G+ + L+
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ +ACG G +HG + G + +G++++ MY + G + E +VF M R
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM-------------------------------- 260
+ VSW ++I+G V G +EA F M
Sbjct: 181 NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 240
Query: 261 -----PGKDFVSWT--TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
G D S+ T+ T ++ G LE + LF M +D V+WT II+ V Q E
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A + FI M DV PN+ T ++V+S A A + G Q+HA ++ + + + +S++NS++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
++Y+KCG + + IF + R+IVS++++I+G++Q G EA L M+ EG P +
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEF 420
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA----CMVDILGRAGSLAEAID 489
SVLSAC ++ ++E G K + Y + G EH A ++++ + GS+ EA
Sbjct: 421 ALASVLSACGNMAILEHG----KQLHA-YVLSIGLEHTAMVLSALINMYCKCGSIEEASR 475
Query: 490 LINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
+ ++ + W A++ G + +DL + + + L PDS T VLS
Sbjct: 476 IFDAAENDDIVS-WTAMINGYAEHGYSREVIDLFEKIPR--VGLRPDSVTFIGVLS 528
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 71/303 (23%)
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG 279
D ++ +S+ D N + V G + A R+F++M KD +SWTT+I+G+ +
Sbjct: 35 DNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNAN 94
Query: 280 NLEKSIELF-NMMPEK-------------------DDVTWT------AIISGFVN----- 308
+ +++ LF NM E DV + A+ +G VN
Sbjct: 95 DSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVG 154
Query: 309 ---------NEQYEEAFRWFIEMLRKD-------------------------------VR 328
N + E R F EM ++ V
Sbjct: 155 SALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVE 214
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ T + L A A + LN G +IHA +K + + N+L ++Y+KCG + +
Sbjct: 215 YDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTL 274
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + R++VS+ ++I+ Q G E A+ F +M++ + PN+ TF +V+S C ++ +
Sbjct: 275 FEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARI 334
Query: 449 EEG 451
E G
Sbjct: 335 EWG 337
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 212/666 (31%), Positives = 340/666 (51%), Gaps = 68/666 (10%)
Query: 24 YEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE--LYVNMPARWR---------DSV 72
++A + MP RNAVS+ +I + R G E+ E L+ + A + +
Sbjct: 64 HQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAA 123
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
CS A G LK G+ A + E + E V+ S+V Y + G + EAR +FD E++
Sbjct: 124 CSRA---GRLKEGKVVHALAVLEGLAEGVFVS-NSLVSMYARCGDMGEARRVFDVTEERD 179
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ--V 190
V+W ++V GY++V E+ +F MRR M NS L + + C G+ V
Sbjct: 180 DVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAV 239
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY------ 244
HG V + G D D+ L ++++ MY + G + EA +F + + V +N++I+G
Sbjct: 240 HGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAA 299
Query: 245 VHNGEIEEAYRLFERMP----------------------------------------GKD 264
VH + EA L+ + G D
Sbjct: 300 VHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDD 359
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
F+ + +I + + +E F +P++D VTWTA+ISG V NE +E A F E+L
Sbjct: 360 FIG-SALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLG 418
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
++P+ T+SSV++A A+ A + G Q+ K + ++ NS + +Y++ GNV
Sbjct: 419 VGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEA 478
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A + F ++ ++VS++++IS AQ+G +AL F +M +VPN+ITFL VL+AC+H
Sbjct: 479 AIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSH 538
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
GLV+EG Y++ MK Y + P +H C+VD+LGRAG LA+A I F P VW
Sbjct: 539 GGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQ 598
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
+LLG+ R H +++ +L A +MEL+P S+ YV L ++Y G+ G+++R K +
Sbjct: 599 SLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERG 658
Query: 565 IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL-QTISKGTK--EFDWPKHDW-SLL 620
++K PG SWI L+ +H F+AG KS + I L + +SK K D +W
Sbjct: 659 VKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKIDKLTTTDTSCIEWVETT 718
Query: 621 GLERDW 626
G E++W
Sbjct: 719 GREQNW 724
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 219/484 (45%), Gaps = 63/484 (13%)
Query: 107 SMVDGYCK--KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG- 163
+++ YC+ G +AR + D+MP +N V++ ++D Y + E+ + FL R
Sbjct: 50 TLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAE 109
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+ + T AC R R +EG VH L G + + NS+++MY R G M EA
Sbjct: 110 VKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEAR 169
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP---------------------- 261
+VF + +RD VSWNSL+SGY+ G EE R+F M
Sbjct: 170 RVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGD 229
Query: 262 -------------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
D + M+ ++ +G L +++ LF + + + V + A+
Sbjct: 230 GSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAM 289
Query: 303 ISGF------VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
I+G V+ E EA + E+ + + P + T SSV+ A + G QIH
Sbjct: 290 IAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQ 349
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
V+K + D I ++L+ LY + D +R F ++ ++++V++ +MISG QN L E A
Sbjct: 350 VLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERA 409
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM-- 474
L LF ++ GL P+ T SV++AC + +V G + M+ + + G + + M
Sbjct: 410 LALFHELLGVGLKPDPFTISSVMNACASLAVVRTG----EQMQC-FATKSGFDRFTAMGN 464
Query: 475 --VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
+ + R+G++ AI M W A++ +H A+ A Q E+
Sbjct: 465 SCIHMYARSGNVEAAIQRFQEMESHDVVS-WSAIIS---SHAQHGCARQALQFFNEMVGA 520
Query: 533 SATP 536
P
Sbjct: 521 KVVP 524
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 155/317 (48%), Gaps = 52/317 (16%)
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD--EANKVFSMMSKRDAVSWNSLISG 243
+ VHG ++R + L N+++ Y RLG D +A ++ M +R+AVS+N LI
Sbjct: 28 QAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDA 87
Query: 244 YVHNGEIEEAYRLF-----------------------------------------ERMPG 262
Y G+ EE+ F E +
Sbjct: 88 YSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAE 147
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
FVS ++++ ++ G++ ++ +F++ E+DDV+W +++SG++ +EE R F M
Sbjct: 148 GVFVS-NSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALM 206
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQG--SQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
R + N L SV+ + +G +H VVK +++D+ + +++V +Y+K G
Sbjct: 207 RRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRG 266
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG------EEALNLFRKMKDEGLVPNQIT 434
+ +A +F ++ + N+V +N+MI+G ++ EAL+L+ +++ G+ P + T
Sbjct: 267 ALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFT 326
Query: 435 FLSVLSACNHVGLVEEG 451
F SV+ ACN G +E G
Sbjct: 327 FSSVIRACNLAGDIEFG 343
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 84/168 (50%), Gaps = 5/168 (2%)
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK--CGNVVDAYRIFTNIDERNIVSY 400
+ A+L Q + +H H+ + + + ++N+L++ Y + G+ A R+ + RN VS+
Sbjct: 22 SCASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSF 81
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
N +I +++ G EE+L F V ++ T+ + L+AC+ G ++EG + ++
Sbjct: 82 NLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKV-VHALA 140
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
L + G +V + R G + EA + + +T E W +L+
Sbjct: 141 VLEGLAEGVFVSNSLVSMYARCGDMGEARRVFD-VTEERDDVSWNSLV 187
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 280/488 (57%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++F+ +P NV + ++ G ++ + + M N T LF+AC
Sbjct: 83 ALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTA 142
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
EGVQVH V + G D+ + ++ I MYG G ++ A ++ D + +N++
Sbjct: 143 AEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAM 202
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I GY+ GE+E A LF M K+ SW M++G + G +E++ ELFN M EK++++W+
Sbjct: 203 IDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWS 262
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+I G++ Y+EA F M R+++RP + LSSVL+A A L+QG IHA+V
Sbjct: 263 AMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNN 322
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ D + +LV +Y+KCG + A+ +F ++++ + ++N+MI G +G E+A+ LF
Sbjct: 323 SNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELF 382
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KM+ + PN IT L VLSAC H G+V+EG F SM+ +Y IEPG EHY C+VD+LGR
Sbjct: 383 FKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGR 442
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA +++ SM EP VWGALLGA R H +++L + + L+ELEP ++ Y +L
Sbjct: 443 AGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALL 502
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S++Y+ G+ D VR K + ++ S G S I VH F G S +K I + L
Sbjct: 503 SNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLML 562
Query: 601 QTISKGTK 608
+ + K K
Sbjct: 563 KNMIKRLK 570
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 176/366 (48%), Gaps = 40/366 (10%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D +C NA+I GYLK G E A +F +M +K+V +W MV G K G + EARE+F++M
Sbjct: 195 DVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMK 254
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
EKN ++W+AM+DGY+K +++ ++F M+R + L+ + AC +G
Sbjct: 255 EKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRW 314
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H V+ +D +LG +++ MY + G +D A VF M K++ +WN++I G +G
Sbjct: 315 IHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGR 374
Query: 250 IEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
E+A LF +M + F ++ +++ + G +++ + +FN M
Sbjct: 375 AEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSM-------------- 420
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
EE + + P V+ L + ++ + M ME
Sbjct: 421 -------EEVY---------GIEPGMEHYGCVVDLLGRAGLLGEAEEV---MYSMPMEPS 461
Query: 366 VSIQNSLVSLYSKCGNVVDAYR---IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
++ +L+ K G+V R I ++ +N Y + + +A+ G ++ N+ +
Sbjct: 462 AAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKL 521
Query: 423 MKDEGL 428
MK+ G+
Sbjct: 522 MKERGV 527
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 13/266 (4%)
Query: 1 MADRTSASYNAMITALINNNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
M D+ S+N M++ + C I EA E+F M +N +S++AMI G+++ G + EA E
Sbjct: 222 MEDKNVGSWNVMVSGMAK--CGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALE 279
Query: 60 LYVNMP---ARWRDSVCSNALIS----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY 112
++ M R R V S+ L + G L GR A + D V ++VD Y
Sbjct: 280 VFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIH-AYVNNNSNSFDAVLGTALVDMY 338
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
K GR+ A ++F+KM +K V W AM+ G ED +LF M++ N ITL
Sbjct: 339 AKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLL 398
Query: 173 ILFEACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV-FSMMS 230
+ AC EG+++ + + +G + + ++ + GR G + EA +V +SM
Sbjct: 399 GVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPM 458
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRL 256
+ A W +L+ +G++E R+
Sbjct: 459 EPSAAVWGALLGACRKHGDVELGERV 484
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 12/233 (5%)
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
NL ++++F +P + + II G + N + +A + +M+ RPN+ T ++
Sbjct: 79 NLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFK 138
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A A +G Q+HAHV+K + DV I+++ + +Y G V A R+ +++
Sbjct: 139 ACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVIC 198
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+N+MI G+ + G E A LF M+D+ V + +S ++ C G++EE F MK
Sbjct: 199 FNAMIDGYLKCGEVEAAKELFWSMEDKN-VGSWNVMVSGMAKC---GMIEEARELFNEMK 254
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE---PPPGVWGALLGA 509
I ++ M+D + G EA+++ N M E P V ++L A
Sbjct: 255 EKNEIS-----WSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAA 302
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 173/467 (37%), Positives = 277/467 (59%), Gaps = 1/467 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A I +++ N +++ Y E +F M G + + + T + +AC
Sbjct: 63 AHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAA 122
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F + EG Q+HGL + D+ + N++I +YGR G+ + A KV M RDAVSWNSL
Sbjct: 123 FCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSL 182
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+S Y+ G +EEA LF+ M ++ SW MI+G+++ G ++++ E+F+ MP KD V+W
Sbjct: 183 LSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWN 242
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDV-RPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
A+++ + + Y E F ML RP+ TL +VLSA A+ +L+QG +H ++ K
Sbjct: 243 AMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDK 302
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+E + + +LV +YSKCG + A +F + +R++ ++NS+I+G + +GLG++AL +
Sbjct: 303 HGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEI 362
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F +M EG PN ITF+ VLSACNHVGL+++ F+ M ++Y IEP EHY CMVD+LG
Sbjct: 363 FSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLG 422
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
R G EA +L+N + + + +LLGA + L+ A+ A L+E P ++ YV
Sbjct: 423 RMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQ 482
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+S+LY+ G+ + VR K + +R++K+PGCS I + VH FLAG
Sbjct: 483 MSNLYASHGRWDEAMEVRGKMRAERVKKNPGCSMIEVDGVVHEFLAG 529
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 178/350 (50%), Gaps = 22/350 (6%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV 103
+I + R G F A ++ MP R D+V N+L+S YL G EEA +F+ M E++V
Sbjct: 151 LINVYGRSGYFEIARKVLDRMPVR--DAVSWNSLLSAYLDKGLVEEARALFDEMEERNVE 208
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF-LSMRRG 162
+W M+ GY G V EARE+FD MP K+VV+W AMV Y V C+ + ++F + +
Sbjct: 209 SWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDS 268
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
+ TL + AC +G VH + + G + + + +++ MY + G +D+A
Sbjct: 269 AERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKA 328
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSK 278
+VF SKRD +WNS+I+G +G ++A +F M + F +++ +++ +
Sbjct: 329 LEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 388
Query: 279 GNLEKSIELFNMMP-----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ-- 331
G L+++ +LF MM E + ++ ++EEA E L +V ++
Sbjct: 389 GLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEA-----EELVNEVPADEAS 443
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCG 380
+ L S+L A L Q +I +++ N ES +Q S +LY+ G
Sbjct: 444 ILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMS--NLYASHG 491
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 148/336 (44%), Gaps = 48/336 (14%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + S+N++++A ++ + EA +F M RN S+ MI+G+ G+ EA E+
Sbjct: 171 MPVRDAVSWNSLLSAYLDKGL-VEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREV 229
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV---------------VAW 105
+ +MP +D V NA+++ Y VG E +F M++ +
Sbjct: 230 FDSMPV--KDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASL 287
Query: 106 GS-------------------------MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
GS +VD Y K G++ +A E+F +++V W +++
Sbjct: 288 GSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSII 347
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV-SRFGF 199
G +D ++F M G N IT + AC + ++ ++ S +G
Sbjct: 348 TGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGI 407
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA-VSWNSLISGYVHNGEIEEAYRLFE 258
+ I ++ + GR+G +EA ++ + + +A + SL+ G++E+A R+
Sbjct: 408 EPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIAN 467
Query: 259 RM---PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
R+ ++ + M ++S G ++++E+ M
Sbjct: 468 RLLESNPRESSGYVQMSNLYASHGRWDEAMEVRGKM 503
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 177/523 (33%), Positives = 295/523 (56%), Gaps = 7/523 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y +G AR IFD+ EKNVV + M+ Y+ + + + +F M +
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + +AC R G+QVH + + G D ++ +GN+++ MYG+ G + EA KV
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF------VSWTTMITGFSSKGNL 281
M RD VSWNS+++GY +G+ ++A + + M + ++ + + ++S N+
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ +F M +K+ ++W +I+ +VNN EA F++M ++P+ +T++S+L A
Sbjct: 257 QYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPAC 316
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ L G ++H ++ K N++ ++ ++N+L+ +Y+KCG + +A +F + R++VS+
Sbjct: 317 GDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWT 376
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
SM+S + ++G G +A+ LF KM D G P+ I F+SVLSAC+H GL+++G YF+ M
Sbjct: 377 SMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQ 436
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I P EH+ACMVD+ GRAG + EA I M EP VWGALL A R H +D+ +
Sbjct: 437 YGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLV 496
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA L +L P + YV+LS++Y+ G +D VR K I+K PG S + L +VH
Sbjct: 497 AADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVH 556
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLE 623
FLAG + K I L + KE + P+ + +L +E
Sbjct: 557 TFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVE 599
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 180/399 (45%), Gaps = 66/399 (16%)
Query: 9 YNAMITALINNNCSIYEAFEIFATM------PMRNAVSYAAMITGF-----VRRGMFYEA 57
+N MI + +NNN + EA IF M P + ++ ++ +R G+
Sbjct: 105 FNVMIRSYVNNNLYV-EALSIFQVMLSCAFNP--DHYTFPCVLKACSGLDNLRVGLQVHD 161
Query: 58 EELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
+ V + + NAL++ Y K G EA ++ + M +DVV+W SMV GY + G+
Sbjct: 162 AIVKVGLDT---NLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQ 218
Query: 118 VIEAREI-------------------------------------FDKMPEKNVVAWTAMV 140
+A EI F++M +KN+++W M+
Sbjct: 219 FDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMI 278
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
Y+ + LFL M GM +++T+ L ACG G ++H + +
Sbjct: 279 AIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQ 338
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+++L N+++ MY + G ++EA VF M RD VSW S++S Y +G+ +A LF +M
Sbjct: 339 PNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKM 398
Query: 261 ----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQ 311
D +++ ++++ S G L++ F MM E+ + + ++ F +
Sbjct: 399 LDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGE 458
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
EEA+ + +M + PN+ ++LSA + ++ G
Sbjct: 459 VEEAYSFIKQM---PMEPNERVWGALLSACRVHSKMDIG 494
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG------SQIHAHVV-KMNMESDVSI 368
FR F+ + R +R ++L + V S A L+Q +++H+ +V ++ D ++
Sbjct: 17 FRGFVSLTR--IRFDRLKVE-VFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTL 73
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
L+ YS G A IF E+N+V +N MI + N L EAL++F+ M
Sbjct: 74 AIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAF 133
Query: 429 VPNQITFLSVLSACN-----HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
P+ TF VL AC+ VGL I + T N+ G +V + G+ G
Sbjct: 134 NPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDT--NLFIGNA----LVAMYGKCGC 187
Query: 484 LAEAIDLINSMTF 496
L EA +++ M +
Sbjct: 188 LREARKVLDQMPY 200
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 200/626 (31%), Positives = 322/626 (51%), Gaps = 73/626 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+A R ++N++++ + + + +A +FA MP R+AVS+ M+ G R G F EA +
Sbjct: 93 LARRNVFTWNSLLS-MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 61 YVNMPARWRD----------SVCS---------------------------NALISGYLK 83
++M A S C+ N++++ Y K
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGK 211
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
G E A +FE M + V +W +MV GR+ A +F+ MP++++V+W AM+ GY
Sbjct: 212 CGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGY 271
Query: 144 MKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ LF M MA + T+T + AC R G QVH + R Y
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY- 330
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
NS +T N+LIS Y +G +E A R+ ++
Sbjct: 331 ----NSQVT--------------------------NALISTYAKSGSVENARRIMDQSME 360
Query: 263 KDF--VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
D +S+T ++ G+ G++E + E+F +M +D V WTA+I G+ N + +EA F
Sbjct: 361 TDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFR 420
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M+ PN TL++VLS A+ A L+ G QIH ++ +E S+ N+++++Y++ G
Sbjct: 421 SMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSG 480
Query: 381 NVVDAYRIFTNIDERN-IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ A R+F + R +++ SMI AQ+G GEEA+ LF +M G+ P++IT++ VL
Sbjct: 481 SFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVL 540
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
SAC+H G V EG Y+ +K + I P HYACMVD+L RAG +EA + I M EP
Sbjct: 541 SACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPD 600
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
WG+LL A R H N +LA+LAA+ L+ ++P+++ Y ++++YS G+ D R+
Sbjct: 601 AIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKA 660
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLA 585
+K K +RK G SW ++ K+H+F A
Sbjct: 661 RKEKAVRKETGFSWTHIRSKIHVFGA 686
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 240/512 (46%), Gaps = 75/512 (14%)
Query: 72 VCSNALISGYLKV----GRCEEAARIFE--AMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
+C+N L+S Y + G +A R+F+ + ++V W S++ + K GR+ +AR +F
Sbjct: 63 LCNN-LLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVF 121
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+MPE++ V+WT MV G + F + L M G TLT + +C
Sbjct: 122 AEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGA 181
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G +VH V + G + + NS++ MYG+ G + A VF M R SWN+++S
Sbjct: 182 VGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNT 241
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
H G ++ A LFE MP + VSW MI G++ G K+++LF+ M + +
Sbjct: 242 HLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMA------- 294
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
P++ T++SVLSA A + G Q+HA++++ M +
Sbjct: 295 -----------------------PDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYN 331
Query: 366 VSIQNSLVSLYSKCGNVVDAYRI---------------------------------FTNI 392
+ N+L+S Y+K G+V +A RI F +
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG- 451
+ R++V++ +MI G+ QNG +EA++LFR M G PN T +VLS C + ++ G
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
I+ +++++L +E ++ + R+GS A + + + + W +++ A
Sbjct: 452 QIHCRAIRSL--LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALA 509
Query: 512 THLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
H + A + ++ +EPD T VLS
Sbjct: 510 QHGQGEEAVGLFEEMLRAGVEPDRITYVGVLS 541
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 49/236 (20%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNM---------------------------------- 362
+L A G IHA VK +
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91
Query: 363 ---ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+V NSL+S+++K G + DA +F + ER+ VS+ M+ G + G EA+
Sbjct: 92 PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 420 FRKMKDEGLVPNQITFLSVLSAC--NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
M +G P Q T +VLS+C G V F L + P ++++
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANS---VLNM 208
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN-LDLAKLAAQHLMELEPD 532
G+ G A + M W A++ THL +DL A+ L E PD
Sbjct: 209 YGKCGDSETATTVFERMPVRSVSS-WNAMVSLN-THLGRMDL----AESLFESMPD 258
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 331/603 (54%), Gaps = 47/603 (7%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR---WRDSVCSNALISGYLKVG 85
+F MP +N +++++M++ + ++G EA ++V++ + + ++I ++G
Sbjct: 106 VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 165
Query: 86 RCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
E+ A++ +V ++DV S++D Y K G + EAR +FD++ EK V WT ++
Sbjct: 166 VVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIA 225
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY K +LF MR + + ++ + AC G Q+H V R G +
Sbjct: 226 GYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM 285
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D+ + N +I Y + + K+F M ++ +SW ++ISGY+ N EA +LF M
Sbjct: 286 DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMN 345
Query: 262 ----GKDFVSWTTMIT---------------GFSSKGNLEK------------------- 283
D + T+++T ++ K NLE
Sbjct: 346 RLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLI 405
Query: 284 -SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+ ++F++M E++ +++ A+I G+ + E+ EA F EM + +PN+ T +++++A++
Sbjct: 406 DAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAAS 465
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
A+L G Q H +VKM ++ + N+LV +Y+KCG++ +A ++F + R++V +NS
Sbjct: 466 NLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNS 525
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
MIS AQ+G EEAL +FR+M EG+ PN +TF++VLSAC+H G VE+G +F SM +
Sbjct: 526 MISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-F 584
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
I+PG EHYAC+V +LGR+G L EA + I M EP VW +LL A R N++L K A
Sbjct: 585 GIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYA 644
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
A+ + +P + Y++LS++++ G D +VR + + K PG SWI + +KV++
Sbjct: 645 AEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNV 704
Query: 583 FLA 585
F+A
Sbjct: 705 FIA 707
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 253/505 (50%), Gaps = 45/505 (8%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+I + ++ D +++ K RV AR +FDKMP KN++ W++MV Y + E
Sbjct: 73 GQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSE 132
Query: 151 DGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
+ +F+ + R+ G N L + AC + +G Q+HG V R GFD D+ +G S+
Sbjct: 133 EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSL 192
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------- 260
I Y + G ++EA VF +S++ AV+W ++I+GY G + LF +M
Sbjct: 193 IDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDR 252
Query: 261 -----------------PGKDF------------VSWTTMITGFSSKGNLEKS-IELFNM 290
GK VS ++ F +K N K+ +LF+
Sbjct: 253 YVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQ 312
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M K+ ++WT +ISG++ N EA + F EM R +P+ +SVL++ + L QG
Sbjct: 313 MVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQG 372
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q+HA+ +K N+ESD ++N L+ +Y+K ++DA ++F + E+N++SYN+MI G++
Sbjct: 373 RQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQ 432
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
EAL LF +M+ PN+ TF ++++A +++ + G + + + ++ P
Sbjct: 433 EKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM-GLDFCPFV 491
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME-- 528
+VD+ + GS+ EA + NS + W +++ H + A + +M+
Sbjct: 492 TNALVDMYAKCGSIEEARKMFNSSIWRDVV-CWNSMISTHAQHGEAEEALGMFREMMKEG 550
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDG 553
++P+ T VLS S G+ DG
Sbjct: 551 IQPNYVTFVAVLSAC-SHAGRVEDG 574
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 197/442 (44%), Gaps = 76/442 (17%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+HG + G D L N +I + + +D A VF M ++ ++W+S++S Y G
Sbjct: 71 IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 130
Query: 250 IEEAYRLF---ERMPG-------------------------------------KDFVSWT 269
EEA +F +R G +D T
Sbjct: 131 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 190
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
++I +S GN+E++ +F+ + EK VTWT II+G+ + + F +M +V P
Sbjct: 191 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 250
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
++ +SSVLSA + L G QIHA+V++ E DVS+ N L+ Y+KC V ++F
Sbjct: 251 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 310
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ +NI+S+ +MISG+ QN EA+ LF +M G P+ SVL++C +E
Sbjct: 311 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 370
Query: 450 EG----------------FI-------YFKS-----MKTLYNI--EPGPEHYACMVDILG 479
+G F+ Y KS K ++++ E Y M++
Sbjct: 371 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 430
Query: 480 RAGSLAEAIDLINSMTF---EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
L+EA++L + M +P + AL+ A +L + L+++ D P
Sbjct: 431 SQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFC-P 489
Query: 537 YVV--LSDLYSVIGKKRDGNRV 556
+V L D+Y+ G + ++
Sbjct: 490 FVTNALVDMYAKCGSIEEARKM 511
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 188/389 (48%), Gaps = 26/389 (6%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-WRDS--VCSNALISG---- 80
++F M ++N +S+ MI+G+++ +EA +L+ M W+ C++ L S
Sbjct: 308 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSRE 367
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
L+ GR A I +A +E D ++D Y K +I+A+++FD M E+NV+++ AM+
Sbjct: 368 ALEQGRQVHAYTI-KANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMI 426
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
+GY + + +LF MR N T L A R G Q H + + G D
Sbjct: 427 EGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLD 486
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ + N+++ MY + G ++EA K+F+ RD V WNS+IS + +GE EEA +F M
Sbjct: 487 FCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREM 546
Query: 261 PGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAIISGFVNNEQY 312
+ ++V++ +++ S G +E + FN MP + + ++S + +
Sbjct: 547 MKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKL 606
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS- 371
EA + FIE + + P + S+LSA + G + +M + +D S
Sbjct: 607 FEA-KEFIE--KMPIEPAAIVWRSLLSACRIAGNVELGK----YAAEMAISTDPKDSGSY 659
Query: 372 --LVSLYSKCGNVVDAYRIFTNIDERNIV 398
L ++++ G D ++ +D +V
Sbjct: 660 ILLSNIFASKGMWADVKKVRDRMDSSEVV 688
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 11/280 (3%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N +I +N I +A ++F M +N +SY AMI G+ + EA EL+ M R +
Sbjct: 392 NGLIDMYAKSNLLI-DAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQ 450
Query: 70 --DSVCSNALISGYLKVGRCEEAARIFEAMVEKDV----VAWGSMVDGYCKKGRVIEARE 123
+ ALI+ + + +V+ + ++VD Y K G + EAR+
Sbjct: 451 KPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARK 510
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F+ ++VV W +M+ + + E+ +F M + G+ N +T + AC R
Sbjct: 511 MFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGR 570
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLIS 242
+G+ + FG ++++ GR G + EA + M + A+ W SL+S
Sbjct: 571 VEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLS 630
Query: 243 GYVHNGEIE---EAYRLFERMPGKDFVSWTTMITGFSSKG 279
G +E A + KD S+ + F+SKG
Sbjct: 631 ACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKG 670
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++RP + +++L S + + IH ++ ++SD + N L+++ SK V +A
Sbjct: 44 NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 103
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACNH 444
+F + +N+++++SM+S ++Q G EEAL +F + + G PN+ SV+ AC
Sbjct: 104 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 163
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
+G+VE+G + ++D + G++ EA + + ++ E W
Sbjct: 164 LGVVEKG-AQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLS-EKTAVTWT 221
Query: 505 ALLGA----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
++ GR+ ++L+L A + PD VLS
Sbjct: 222 TIIAGYTKCGRSAVSLEL--FAQMRETNVVPDRYVVSSVLS 260
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 208/636 (32%), Positives = 337/636 (52%), Gaps = 50/636 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR---DSVCSNALISGYL 82
A ++F R+AVS+ MI GFV G F A E +M R+ D +++ G
Sbjct: 53 ASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMK-RYGFAVDGYSFGSILKGVA 111
Query: 83 KVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
VG E ++ MV E +V A +++D Y K RV +A E+F + +N V W A
Sbjct: 112 CVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNA 171
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ GY +V F L M G+ + T L ++ QVH + + G
Sbjct: 172 LISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHG 231
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
D + N+IIT Y G +++A +VF + RD V+WNS+++ Y+ N + EEA++LF
Sbjct: 232 LASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLF 291
Query: 258 ERMP----GKDFVSWTTMITGF-------------------------------------S 276
M D ++T++I+ S
Sbjct: 292 LEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKS 351
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
++++++ +F + KD V+W +I++GF + E+A ++F M + V + S+
Sbjct: 352 HSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSA 411
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
VL + + ATL G Q+H V+K E + + +SL+ +YSKCG + DA + F + +
Sbjct: 412 VLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDS 471
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+++NS+I G+AQ+G G+ AL+LF MKD + + ITF++VL+AC+H+GLVEEG+ + K
Sbjct: 472 SIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLK 531
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
SM++ Y I P EHYACM+D+LGRAG L EA LI +M FEP VW LLGA RT ++
Sbjct: 532 SMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDI 591
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+LA A HL+ELEP+ YV+LS ++ + + + ++ K + ++K PG SWI +
Sbjct: 592 ELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEV 651
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
K++V F A +S + +EI + L + + + D+
Sbjct: 652 KNEVRSFNAEDRSHPNCEEIYLRLGELMEEIRRLDY 687
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 202/387 (52%), Gaps = 42/387 (10%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ GY K G + A ++F + +++ V+W M+ G++ + FE + SM+R G A
Sbjct: 39 NIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAV 98
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ + + + G QVH ++ + G++ ++ G++++ MY + +++A +VF
Sbjct: 99 DGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVF 158
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------- 261
++ R++V+WN+LISGY G+ A+ L + M
Sbjct: 159 KSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHK 218
Query: 262 --------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE-KDDVTWTAIISGF 306
D +IT +S G++E + +F+ E +D VTW ++++ +
Sbjct: 219 LTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAY 278
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+ N Q EEAF+ F+EM P+ T +SV+SA+ + QG +H V+K +E V
Sbjct: 279 LVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLV 338
Query: 367 SIQNSLVSLY--SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
I NSL+++Y S ++ +A IF +++ ++ VS+NS+++GF+Q+GL E+AL F M+
Sbjct: 339 PISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMR 398
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEG 451
+ +V + F +VL +C+ + ++ G
Sbjct: 399 SQYVVIDHYAFSAVLRSCSDLATLQLG 425
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 148/299 (49%), Gaps = 43/299 (14%)
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
YR V H L + G I N+II+ Y + G + A+K+F S+RDAVSWN++I+G
Sbjct: 16 YRASVN-HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAG 74
Query: 244 YVHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKG-------------------- 279
+V+ G E A + M F S+ +++ G + G
Sbjct: 75 FVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGN 134
Query: 280 ---------------NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+E + E+F + ++ VTW A+ISG+ AF W ++ +
Sbjct: 135 VFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAF-WLLDCME 193
Query: 325 -KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ V + T + +L+ +Q+HA +VK + SD ++ N++++ YS+CG++
Sbjct: 194 LEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIE 253
Query: 384 DAYRIFTN-IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
DA R+F I+ R++V++NSM++ + N EEA LF +M+ G P+ T+ SV+SA
Sbjct: 254 DAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISA 312
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 3/170 (1%)
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
LS S+ TA L + S H +K + + N+++S Y+KCG + A ++F +R+
Sbjct: 7 LSQSSFTA-LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDA 65
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
VS+N+MI+GF G E AL + MK G + +F S+L VG VE G S
Sbjct: 66 VSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVG-QQVHS 124
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
M E + ++D+ + + +A ++ S+ W AL+
Sbjct: 125 MMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSV-TWNALI 173
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 192/629 (30%), Positives = 336/629 (53%), Gaps = 83/629 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +T+ S+N +++ + +A ++F +P+R++VS+ +I G+ + G F +A ++
Sbjct: 36 MPVKTTFSWNTILSGYAKQG-KLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKI 94
Query: 61 YVNM------PARWRDS----------------------------VC---SNALISGYLK 83
+V+M P ++ + C +N+L++ Y K
Sbjct: 95 FVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAK 154
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
G + A +F+ M ++ +W +M+ + GRV A F+ + E+++V+W +M+ G
Sbjct: 155 TGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAG- 213
Query: 144 MKVDCFEDGFD----LFLS--MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
C + GFD F S ++ + + +L AC + G Q+HG + R
Sbjct: 214 ----CNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRT 269
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
FD +GN++I+MY + +G +E A R+
Sbjct: 270 MFDASGAVGNALISMYAK-------------------------------SGGVEIARRII 298
Query: 258 ER--MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
E+ + D +++T ++ G+ G++ + ++FN + + D V WTA+I G+V N +A
Sbjct: 299 EQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDA 358
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F M+ + RPN TL+++LSAS++ +LN G QIHA ++ S+ N+L ++
Sbjct: 359 IEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTM 418
Query: 376 YSKCGNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
Y+K G++ A ++F + + R+ VS+ SMI AQ+GLGEEA+ LF +M G+ P+ IT
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHIT 478
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
++ VLSAC H GLVE+G YF MK ++ I+P HYACMVD+ GRAG L EA + +M
Sbjct: 479 YVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENM 538
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
EP WG+LL + + + N+DLAK+AA+ L+ +EP+++ Y L+++YS GK D
Sbjct: 539 PMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAA 598
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
++R K + ++K G SW+ +++K H+F
Sbjct: 599 KIRKLMKARGVKKEQGLSWVQIQNKTHVF 627
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 244/504 (48%), Gaps = 70/504 (13%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N L++ Y K G +A +F M K +W +++ GY K+G++ +A ++FD +P ++ V
Sbjct: 14 NNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSV 73
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WT ++ GY ++ FED +F+ M + + TLT + +C G +VH V
Sbjct: 74 SWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFV 133
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G + + NS++ MY + G + A VF M R+ SWN++IS +++ G ++ A
Sbjct: 134 VKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLAL 193
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
FE + +D VSW +MI G + GF N E
Sbjct: 194 AQFELLSERDIVSWNSMIAGCNQH--------------------------GFDN-----E 222
Query: 315 AFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A ++F +L+ ++P++ +L+S LSA A L+ G QIH ++V+ ++ ++ N+L+
Sbjct: 223 ALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALI 282
Query: 374 SLYSKC---------------------------------GNVVDAYRIFTNIDERNIVSY 400
S+Y+K G++ A +IF ++ + ++V++
Sbjct: 283 SMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAW 342
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMK 459
+MI G+ QNGL +A+ +F+ M EG PN T ++LSA + V + G I+ +++
Sbjct: 343 TAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIR 402
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH-LNLDL 518
+ + P + + + +AGS+ A + N + W +++ A H L +
Sbjct: 403 SGEALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEA 460
Query: 519 AKLAAQHL-MELEPDSATPYVVLS 541
+L Q L + ++PD T VLS
Sbjct: 461 IELFEQMLTLGIKPDHITYVGVLS 484
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 63/279 (22%)
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ G + + L N+++ +Y + GF +A+ +F+ M + SWN+++SGY G++E+A++
Sbjct: 3 KLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQ 62
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+F+ +P +D VSWTT+I G++ G ++E+A
Sbjct: 63 VFDLIPVRDSVSWTTIIVGYNQMG-------------------------------RFEDA 91
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+ F++M++ V P Q TL++VL++ AAT + G ++H+ VVK+ + + V + NSL+++
Sbjct: 92 IKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNM 151
Query: 376 YSK-------------------------------CGNVVDAYRIFTNIDERNIVSYNSMI 404
Y+K CG V A F + ER+IVS+NSMI
Sbjct: 152 YAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMI 211
Query: 405 SGFAQNGLGEEALNLFRK-MKDEGLVPNQITFLSVLSAC 442
+G Q+G EAL F +KD L P++ + S LSAC
Sbjct: 212 AGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSAC 250
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+VK+ + V + N+L++LY+K G +DA+ +F + + S+N+++SG+A+ G E+A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 417 LNLFRKMKDEGLVP--NQITFLSVLSACNHVGLVEEGFIYFKSM 458
+F L+P + +++ +++ N +G E+ F M
Sbjct: 61 HQVF------DLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDM 98
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 200/621 (32%), Positives = 335/621 (53%), Gaps = 67/621 (10%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNA-----LISGYLK 83
IF M RNAV+ ++ G R+ EA +++ M +D V N+ L+S + +
Sbjct: 408 IFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM----KDLVEINSESLVVLLSTFTE 463
Query: 84 VGRCEEAAR--------IFEA-MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+E R +F + +V+ + ++V+ Y K + A +F MP K+ V
Sbjct: 464 FSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTV 523
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W +M+ G + FE+ F +M+R GM ++ ++ +C G Q+HG
Sbjct: 524 SWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEG 583
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV-HNGEIEEA 253
++G D D+ + N+++T+Y ++E KVF M + D VSWNS I + + +A
Sbjct: 584 FKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQA 643
Query: 254 YRLFERM------PGK-DFVSWTTMITGFSSKG--------------------------- 279
+ F M P + F++ ++ FS G
Sbjct: 644 LKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAF 703
Query: 280 -----NLEKSIELFNMMPEK-DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+E +F+ M E+ D+V+W ++ISG++++ +A M+++ + + T
Sbjct: 704 YGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFT 763
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
++VLSA A+ ATL +G ++HA V+ +ESDV + ++LV +Y+KCG + A R F +
Sbjct: 764 FATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMP 823
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
RNI S+NSMISG+A++G G++AL +F +MK G P+ +TF+ VLSAC+HVGLV+EG+
Sbjct: 824 VRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYK 883
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA---- 509
+FKSM +Y + P EH++CMVD+LGRAG + + D I +M +P +W +LGA
Sbjct: 884 HFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRA 943
Query: 510 -GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
GR N +L + AA+ L+ELEP +A YV+LS++++ G D R+ + ++K
Sbjct: 944 NGR---NTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKD 1000
Query: 569 PGCSWIILKDKVHLFLAGRKS 589
GCSW+ +KD VHLF+AG ++
Sbjct: 1001 AGCSWVNMKDGVHLFVAGDQT 1021
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 246/502 (49%), Gaps = 63/502 (12%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N +++ + + SI +A +F + RN+V++ ++I+ + RRG A +L+ M
Sbjct: 282 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 341
Query: 70 D--------SVCSNALISGYLKVGRC------EEAARIFEAMVEKDVVAWGSMVDGYCKK 115
+ ++CS L++ + C + RI ++ +D+ ++V+G+ +
Sbjct: 342 ELNLRPNEYTLCS--LVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARY 399
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + A+ IF +M ++N V ++ G + E+ +F M + + NS +L +L
Sbjct: 400 GLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVLL 458
Query: 176 EACGRFFRYRE----GVQVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
F +E G +VH + R G D I +GN+++ MYG+ +D A VF +M
Sbjct: 459 STFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMP 518
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV----------------SWTT---- 270
+D VSWNS+ISG HN EEA F M V W T
Sbjct: 519 SKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQ 578
Query: 271 -------------------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE- 310
++T ++ ++ + ++F MPE D V+W + I E
Sbjct: 579 IHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEA 638
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+A ++F+EM++ RPN++T ++L+A ++ + L G QIHA ++K ++ D +I+N
Sbjct: 639 SVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIEN 698
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+L++ Y KC + D IF+ + E R+ VS+NSMISG+ +G+ +A++L M G
Sbjct: 699 ALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQK 758
Query: 430 PNQITFLSVLSACNHVGLVEEG 451
+ TF +VLSAC V +E G
Sbjct: 759 LDGFTFATVLSACASVATLERG 780
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 226/493 (45%), Gaps = 87/493 (17%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
++ A ++F MP +N VS++ +I+G+ + M EA L+ V S+ L+ +
Sbjct: 190 NLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLF--------KGVISSGLLPNH 241
Query: 82 LKVGR----CEEA------------ARIFEAMVEKDVVAWGSMVDGYCK-KGRVIEAREI 124
VG C++ A I + D++ ++ Y G + +A +
Sbjct: 242 FAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRV 301
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN----SITLTILFEA--- 177
FD++ +N V W +++ Y + F LF M+ G+ N TL L A
Sbjct: 302 FDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACS 361
Query: 178 ---CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
CG Q+ + + GF D+ +G++++ + R G MD A +F M R+A
Sbjct: 362 LADCGLVLLE----QMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNA 417
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFV-----SWTTMITGFSSKGNLEK------ 283
V+ N L+ G + EEA ++F+ M KD V S +++ F+ NL++
Sbjct: 418 VTMNGLMVGLARQHQGEEAAKVFKEM--KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQ 475
Query: 284 ----------------------------------SIELFNMMPEKDDVTWTAIISGFVNN 309
+ +F +MP KD V+W ++ISG +N
Sbjct: 476 EVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHN 535
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
E++EEA F M R + P+ ++ S LS+ ++ L G QIH K ++ DVS+
Sbjct: 536 ERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVS 595
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ-NGLGEEALNLFRKMKDEGL 428
N+L++LY++ ++ + ++F + E + VS+NS I A+ +AL F +M G
Sbjct: 596 NALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGW 655
Query: 429 VPNQITFLSVLSA 441
PN++TF+++L+A
Sbjct: 656 RPNRVTFINILAA 668
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 210/454 (46%), Gaps = 89/454 (19%)
Query: 54 FYEAEELYVNM--PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
Y+A L++ + D N LI+ Y+++G A ++F+ M +K++V+W ++ G
Sbjct: 156 LYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISG 215
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y + ++MP ++ LF + G+ N +
Sbjct: 216 YTQ-----------NRMP--------------------DEACSLFKGVISSGLLPNHFAV 244
Query: 172 TILFEACGRFFR--YREGVQVHGLVSRFGFDYDIILGNSIITMYGRL-GFMDEANKVFSM 228
AC + + G+Q+H + + D+IL N +++MY G +D+A++VF
Sbjct: 245 GSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDE 304
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFE--RMPG------------------------ 262
+ R++V+WNS+IS Y G+ A++LF +M G
Sbjct: 305 IKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLAD 364
Query: 263 -------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
+D + ++ GF+ G ++ + +F M +++ VT ++
Sbjct: 365 CGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLM 424
Query: 304 SGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQ----GSQIHAHVV 358
G Q EEA + F EM KD V N +L +LS + L + G ++HA++
Sbjct: 425 VGLARQHQGEEAAKVFKEM--KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLF 482
Query: 359 KMNM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+ + ++ +SI N+LV++Y KC + +A +F + ++ VS+NSMISG N EEA+
Sbjct: 483 RSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAV 542
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ F MK G+VP+ + +S LS+C+ +G + G
Sbjct: 543 SCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG 576
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 150/302 (49%), Gaps = 25/302 (8%)
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
T+I + GNL + +LF+ MP+K+ V+W+ +ISG+ N +EA F ++ + P
Sbjct: 180 TLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLP 239
Query: 330 NQLTLSSVLSA--SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC-GNVVDAY 386
N + S L A + + G QIHA + K+ SD+ + N L+S+YS C G++ DA+
Sbjct: 240 NHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAH 299
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG----LVPNQITFLSVLSAC 442
R+F I RN V++NS+IS + + G A LF M+ EG L PN+ T S+++A
Sbjct: 300 RVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAA 359
Query: 443 NHVGLVEEGFIYFKSMKT-------LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
L + G + + M T L ++ G + +V+ R G + A + M
Sbjct: 360 --CSLADCGLVLLEQMLTRIEKSGFLRDLYVG----SALVNGFARYGLMDCAKMIFKQMY 413
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKL--AAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
+ G ++G R H + AK+ + L+E+ +S VVL ++ ++G
Sbjct: 414 DRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSES---LVVLLSTFTEFSNLKEG 470
Query: 554 NR 555
R
Sbjct: 471 KR 472
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 142/300 (47%), Gaps = 21/300 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV------N 63
NA++T + SI E ++F MP + VS+ + I + YEA L
Sbjct: 596 NALLTLYAETD-SINECQKVFFQMPEYDQVSWNSFIGALAK----YEASVLQALKYFLEM 650
Query: 64 MPARWRDSVCSN----ALISGYLKVGRCEE-AARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
M A WR + + A +S + +G + A I + V D +++ Y K ++
Sbjct: 651 MQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQM 710
Query: 119 IEAREIFDKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ IF +M E+ + V+W +M+ GY+ DL M + G + T + A
Sbjct: 711 EDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSA 770
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
C G++VH R + D+++G++++ MY + G +D A++ F +M R+ SW
Sbjct: 771 CASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSW 830
Query: 238 NSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
NS+ISGY +G ++A ++F RM D V++ +++ S G +++ + F M E
Sbjct: 831 NSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGE 890
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 64/113 (56%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L S +++L + +H + K DV N+L+++Y + GN+V A ++F +
Sbjct: 143 LDSEFDRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMP 202
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
++N+VS++ +ISG+ QN + +EA +LF+ + GL+PN S L AC G
Sbjct: 203 QKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 312/583 (53%), Gaps = 40/583 (6%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMP----MRNAVSYAAMITGFVRRGMFYE 56
M D+ SY MI L+ N C EA E+F M + N ++ +I G
Sbjct: 361 MPDKGCVSYTTMIMGLVQNEC-FREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILN 419
Query: 57 AEELYVNMPARWRDSVC--SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
++ + + + S L+ Y EA R+F+ M E ++V+W M++GY K
Sbjct: 420 CRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAK 479
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G V ARE+F+++P+K+V++W M+DGY+ ++ + ++ +M R G+A N I + L
Sbjct: 480 AGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNL 539
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
ACGR +G Q+HG+V + GFD + +II Y G MD A F + +K
Sbjct: 540 VSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHL 599
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
SWN+L ++GF ++++ ++F+ MPE+
Sbjct: 600 ESWNAL-------------------------------VSGFIKNRMVDQARKIFDDMPER 628
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D +W+ +ISG+ +Q A F +M+ ++PN++T+ SV SA A TL +G H
Sbjct: 629 DVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAH 688
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER--NIVSYNSMISGFAQNGL 412
++ ++ + +++ +L+ +Y+KCG++ A + F I ++ ++ +N++I G A +G
Sbjct: 689 EYICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGH 748
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
L++F M+ + PN ITF+ VLSAC H GLVE G F+ MK+ YN+EP +HY
Sbjct: 749 ASMCLDVFSDMQRYNIKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYG 808
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
CMVD+LGRAG L EA ++I SM + +WG LL A RTH ++++ + AA+ L L P
Sbjct: 809 CMVDLLGRAGLLEEAEEMIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPS 868
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
V+LS++Y+ G+ D + VR + +R+ + PGCS +I
Sbjct: 869 HGGGKVLLSNIYADAGRWEDVSLVRRAIQNQRMERMPGCSGVI 911
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 239/508 (47%), Gaps = 80/508 (15%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+LI+ Y K G ++A +F+A + ++ MV GY K G++ AR++FD MP+K V
Sbjct: 308 NSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCV 367
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
++T M+ G ++ +CF + ++F MR G+ N +TL + AC F +H +
Sbjct: 368 SYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIA 427
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ + +++ +++ Y + EA ++F M + + VSWN +++GY G ++ A
Sbjct: 428 IKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMAR 487
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
LFER+P KD +SW TM I G++ + E
Sbjct: 488 ELFERVPDKDVISWGTM-------------------------------IDGYILMNRLHE 516
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A + MLR + N++ + +++SA + G Q+H VVK + IQ +++
Sbjct: 517 ALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIH 576
Query: 375 LYSKCG------------------------------NVVD-AYRIFTNIDERNIVSYNSM 403
Y+ CG +VD A +IF ++ ER++ S+++M
Sbjct: 577 FYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTM 636
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-----FIYFKSM 458
ISG+AQ AL LF KM G+ PN++T +SV SA +G ++EG +I +S+
Sbjct: 637 ISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESI 696
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM---TFEPPPGVWGALLG--AGRTH 513
N+ A ++D+ + GS+ A+ N + TF P W A++ A H
Sbjct: 697 PLNDNLR------AALIDMYAKCGSINSALQFFNQIRDKTFSVSP--WNAIICGLASHGH 748
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLS 541
++ L + ++P+ T VLS
Sbjct: 749 ASMCLDVFSDMQRYNIKPNPITFIGVLS 776
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 136/298 (45%), Gaps = 62/298 (20%)
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+G Q+H LV + G + + NS+I MY + G + +A +F + +S N ++ GY
Sbjct: 287 QGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYA 346
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
G+++ A +LF+ MP K VS+TTMI G
Sbjct: 347 KAGQLDNARKLFDIMPDKGCVSYTTMIM-------------------------------G 375
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
V NE + EA F +M V PN LTL +V+ A + + IHA +K+ +E
Sbjct: 376 LVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGL 435
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE----------- 414
V + +L+ Y C V +A R+F + E N+VS+N M++G+A+ GL +
Sbjct: 436 VLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPD 495
Query: 415 --------------------EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
EAL ++R M GL N+I ++++SAC + + +G+
Sbjct: 496 KDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGW 553
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 31/142 (21%)
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY--------- 386
+++SA ++ +QG Q+H+ V+K+ + S+ IQNSL+++Y+K G++ DA
Sbjct: 274 ALVSALKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTL 333
Query: 387 ----------------------RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
++F + ++ VSY +MI G QN EAL +F+ M+
Sbjct: 334 NPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMR 393
Query: 425 DEGLVPNQITFLSVLSACNHVG 446
+G+VPN +T ++V+ AC+H G
Sbjct: 394 SDGVVPNDLTLVNVIYACSHFG 415
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 293/529 (55%), Gaps = 37/529 (6%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+N LI Y K + A ++F + K+ +W ++ Y + G EA + D+MP+ N+
Sbjct: 52 ANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNL 111
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRR--GGMAFNSITLTILFEACGRFFRYREGVQVH 191
V++ +++ G ++ ++F +M + + F+ TL L +C QVH
Sbjct: 112 VSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVH 171
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
G G + +II+GN++I YG+ G E +
Sbjct: 172 GAAIIIGLNSNIIIGNALIDAYGKCG-------------------------------EPD 200
Query: 252 EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
++ +F RMP +D VSWT+M+ ++ LE + LF+ M EK+ V+WTA+I+GF N +
Sbjct: 201 ISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGR 260
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK---MNMESDVSI 368
+EA F +M + + P+ T +SVLSA A A + +G +IH H+++ ++ ++ I
Sbjct: 261 GDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFI 320
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
N+L+ +Y KCG + A +F + E++IVS+NS+I+GFAQNG GEE+L +F +M + +
Sbjct: 321 LNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADI 380
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
PN +TFL +LSAC H GLV EG SM+ Y + P +HYA M+D+LGR L EA+
Sbjct: 381 RPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAM 440
Query: 489 DLIN-SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
LI + G+WGALLGA R H N+DLA+ AA+ L +LEP +A YV++ ++Y+
Sbjct: 441 GLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAAA 500
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
+ + +VR + +RK CSWI +++ H F+A +S + E+
Sbjct: 501 SRWDEARQVRRLMMERGLRKEAACSWIEVRNTRHQFVAKERSHCQINEV 549
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 155/353 (43%), Gaps = 82/353 (23%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
SI A ++F +P++N S+ +I+ + R G+F EA L MP + V N+LISG
Sbjct: 64 SIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPK--PNLVSYNSLISGL 121
Query: 82 LKVGRCEEAARIFEAMVEK----------------------------------------- 100
G +E+ +F+ M+++
Sbjct: 122 GHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNS 181
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED--------- 151
+++ +++D Y K G + IF +MPE++VV+WT+MV Y + ED
Sbjct: 182 NIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQ 241
Query: 152 ------------GF----------DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
GF LF MR G+ ++ T + AC G +
Sbjct: 242 EKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKE 301
Query: 190 VHGLVSR-FGFDY--DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
+HG + R DY +I + N++I MY + G M A +F M ++D VSWNSLI+G+
Sbjct: 302 IHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQ 361
Query: 247 NGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
NG EE+ +FERM D V++ +++ G + + + + + M EKD
Sbjct: 362 NGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSM-EKD 413
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P SS++S T L G +H+H +K + + N L+ YSKC ++ A+++
Sbjct: 12 PAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKV 71
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + +N S+N +IS ++++GL EA NL +M PN +++ S++S H G
Sbjct: 72 FHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPK----PNLVSYNSLISGLGHHGFR 127
Query: 449 EEGFIYFKSM 458
+E FK+M
Sbjct: 128 KESLNVFKTM 137
>gi|449451309|ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 184/533 (34%), Positives = 296/533 (55%), Gaps = 37/533 (6%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D +N LI Y K E A + F+ + +++ +W +++ Y + G +AR++FD+MP
Sbjct: 45 DLFLANRLIDMYSKCNSMENAQKAFDDLPIRNIHSWNTILASYSRAGFFSQARKVFDEMP 104
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG--MAFNSITLTILFEACGRFFRYREG 187
N+V++ ++ + + + ++F M++ +A + ITL + C
Sbjct: 105 HPNIVSYNTLISSFTHHGLYVESMNIFRQMQQDFDLLALDEITLVSIAGTCACLGALEFL 164
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
QVHG G ++++I+ N+I+ YG+ G
Sbjct: 165 RQVHGAAIVIGLEFNMIVCNAIVDAYGKCG------------------------------ 194
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
+ + +Y +F RM +D V+WT+M+ ++ L+ + +F+ MP K+ TWTA+I+ V
Sbjct: 195 -DPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVHTWTALINALV 253
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME---S 364
N+ EA F +ML + PN T VLSA A A + +G +IH +++ + E
Sbjct: 254 KNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFP 313
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
+V + N+L+ LYSK G+V A +F I E+++VS+NS+I+GFAQNGLG EAL FRKM
Sbjct: 314 NVYVCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMT 373
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
+ G+ PN++TFL+VLSAC+H GL EG + M+ Y+IEP EHYA M+D+ GR L
Sbjct: 374 EVGIRPNKVTFLAVLSACSHTGLSSEGLCILELMEKFYDIEPSLEHYAVMIDMFGRENRL 433
Query: 485 AEAIDLIN-SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
AEA+DLI+ + G+WGA+LGA R H NLDLA AA+ L E+EPD+A YV+LS++
Sbjct: 434 AEALDLISRAPNGSKHVGIWGAVLGACRIHENLDLAIRAAETLFEMEPDNAGRYVMLSNV 493
Query: 544 YSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
++ + D + VR + + +K S I +++ H F+A S + EI
Sbjct: 494 FAAASRWMDAHNVRKLMEERGFKKEVAYSCIEIRNIRHKFVARDNSHSQMGEI 546
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 181/414 (43%), Gaps = 87/414 (21%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
LF C + R G+ +H + + +D+ L N +I MY + M+ A K F + R+
Sbjct: 17 LFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLPIRN 76
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
SWN++++ Y G +A ++F+ MP + VS+ T+I+ F+ G +S+ +F M +
Sbjct: 77 IHSWNTILASYSRAGFFSQARKVFDEMPHPNIVSYNTLISSFTHHGLYVESMNIFRQMQQ 136
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
D+ + +++TL S+ A L Q+
Sbjct: 137 DFDL-----------------------------LALDEITLVSIAGTCACLGALEFLRQV 167
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ---- 409
H + + +E ++ + N++V Y KCG+ +Y IF+ + ER++V++ SM+ + Q
Sbjct: 168 HGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRL 227
Query: 410 ---------------------------NGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
N EAL+LF++M +E PN TF+ VLSAC
Sbjct: 228 DDAFRVFSCMPVKNVHTWTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSAC 287
Query: 443 NHVGLVEE-----GFIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMT 495
+ L+ + G I +S + + P Y C ++D+ ++G + A L N +
Sbjct: 288 ADLALIAKGKEIHGLIIRRSSELNF-----PNVYVCNALIDLYSKSGDVKSARMLFN-LI 341
Query: 496 FEPPPGVWGALL------GAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
E W +L+ G GR A LA + + E + P+ T VLS
Sbjct: 342 LEKDVVSWNSLITGFAQNGLGRE------ALLAFRKMTEVGIRPNKVTFLAVLS 389
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 146/321 (45%), Gaps = 50/321 (15%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR--------------- 69
+A ++F MP N VSY +I+ F G++ E+ ++ M +
Sbjct: 95 QARKVFDEMPHPNIVSYNTLISSFTHHGLYVESMNIFRQMQQDFDLLALDEITLVSIAGT 154
Query: 70 ------------------------DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAW 105
+ + NA++ Y K G + + IF M E+DVV W
Sbjct: 155 CACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTW 214
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
SMV Y + R+ +A +F MP KNV WTA+++ +K + DLF M +
Sbjct: 215 TSMVVAYNQTSRLDDAFRVFSCMPVKNVHTWTALINALVKNKYSNEALDLFQQMLEEKTS 274
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY---DIILGNSIITMYGRLGFMDEA 222
N+ T + AC +G ++HGL+ R + ++ + N++I +Y + G + A
Sbjct: 275 PNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSA 334
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSWTTMITGFS 276
+F+++ ++D VSWNSLI+G+ NG EA F +M P K V++ +++ S
Sbjct: 335 RMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVGIRPNK--VTFLAVLSACS 392
Query: 277 SKGNLEKSIELFNMMPEKDDV 297
G + + + +M + D+
Sbjct: 393 HTGLSSEGLCILELMEKFYDI 413
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 111/241 (46%), Gaps = 19/241 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R ++ +M+ A N + +AF +F+ MP++N ++ A+I V+ EA +L
Sbjct: 206 MKERDVVTWTSMVVAY-NQTSRLDDAFRVFSCMPVKNVHTWTALINALVKNKYSNEALDL 264
Query: 61 YVNMPARWRDSVCSNA-----LISGYLKVGRCEEAARIFEAMVEK-------DVVAWGSM 108
+ M + NA ++S + + I ++ + +V ++
Sbjct: 265 FQQM---LEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFPNVYVCNAL 321
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
+D Y K G V AR +F+ + EK+VV+W +++ G+ + + F M G+ N
Sbjct: 322 IDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVGIRPNK 381
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN--SIITMYGRLGFMDEANKVF 226
+T + AC EG+ + L+ +F +D + L + +I M+GR + EA +
Sbjct: 382 VTFLAVLSACSHTGLSSEGLCILELMEKF-YDIEPSLEHYAVMIDMFGRENRLAEALDLI 440
Query: 227 S 227
S
Sbjct: 441 S 441
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 302/564 (53%), Gaps = 41/564 (7%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVI---------EAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
V+ ++ G +GY V AR +FD P+ V W A+ GY
Sbjct: 86 VQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAF 145
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
+ + LF M+ + N T ++ ++C + + EG ++H V + G + + + +
Sbjct: 146 YREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATT 205
Query: 209 IITMY--GR---------LGFMDE--------------------ANKVFSMMSKRDAVSW 237
+I +Y GR +G ++ A ++F + +RD V W
Sbjct: 206 LIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLW 265
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N ++SGY+ G+++ A +LF+ MP +D +SW TM+ G+++ G++E +LF MPE++
Sbjct: 266 NIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVF 325
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+W +I G+ +N + E R F ML V PN TL +VLSA A L+ G +H +
Sbjct: 326 SWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVY 385
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+ + + + N+L+ +YSKCG + +A +F ++D ++++++NSMI G A +G G +A
Sbjct: 386 AATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADA 445
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L LF +MK G P+ ITF+ VL +C H+GLVEEG YF SM Y+I P EHY CMVD
Sbjct: 446 LTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVD 505
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+ GRAG L AI+ + M E +W ALLGA R + N+DLA+LA Q L+ LEP +
Sbjct: 506 LFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPAN 565
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
YV+LS++Y +G+ +D R+++ + +K PGCS I + D V F + + KEI
Sbjct: 566 YVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEI 625
Query: 597 EVTLQTISKGTKEFDWPKHDWSLL 620
L+ + K + F + + LL
Sbjct: 626 YGVLKGLMKLLRSFGYEPNMMELL 649
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 7/275 (2%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
+I A+++F M RN V++ +MI+G++ A L+ P R D V N ++SGY
Sbjct: 215 AIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPER--DVVLWNIMVSGY 272
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+++G + A ++F+ M +D ++W +M++GY G V ++F++MPE+NV +W ++
Sbjct: 273 IEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIG 332
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY CF + F M G+ N TL + AC R G VH + GF
Sbjct: 333 GYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFK 392
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
I +GN++I MY + G ++ A +VF M +D ++WNS+I G +G +A LF +M
Sbjct: 393 GSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQM 452
Query: 261 P----GKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
D +++ ++ + G +E+ FN M
Sbjct: 453 KINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSM 487
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 166/395 (42%), Gaps = 64/395 (16%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+V + GF Y+ + +++T + L M A +F WN++ GY HN
Sbjct: 85 KVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNA 144
Query: 249 EIEEAYRLFERMP----------------------------------------GKDFVSW 268
E LF +M G FV+
Sbjct: 145 FYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVA- 203
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
TT+I +S + + +LF M E++ V WT++ISG++ + A R F D+
Sbjct: 204 TTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLF------DLA 257
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYR 387
P + VL + + G A + M D N++++ Y+ G+V +
Sbjct: 258 PER---DVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQ 314
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL-VPNQITFLSVLSACNHVG 446
+F + ERN+ S+N +I G+A NG E L F++M +GL VPN T ++VLSAC +G
Sbjct: 315 LFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLG 374
Query: 447 LVEEG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
++ G +Y ++ +I G ++D+ + G + A+++ SM + W
Sbjct: 375 ALDLGKWVHVYAATIGFKGSIYVG----NALIDMYSKCGLIENAMEVFESMDLKDLI-TW 429
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMEL---EPDSAT 535
+++ TH L H M++ +PD T
Sbjct: 430 NSMICGLATH-GCGADALTLFHQMKINGEKPDGIT 463
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 16/254 (6%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA--- 57
M R + S+N M+ NN + ++F MP RN S+ +I G+ G F+E
Sbjct: 288 MPYRDTMSWNTMLNGYANNG-DVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRC 346
Query: 58 -EELYVNMPARWRDSVCSNALIS----GYLKVGRCEEAARIFEAMV--EKDVVAWGSMVD 110
+ + ++ D+ L + G L +G+ ++ A + + + +++D
Sbjct: 347 FKRMLIDGLVVPNDATLVTVLSACARLGALDLGK---WVHVYAATIGFKGSIYVGNALID 403
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K G + A E+F+ M K+++ W +M+ G C D LF M+ G + IT
Sbjct: 404 MYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGIT 463
Query: 171 LTILFEACGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
+ +C EG + +V+ + I ++ ++GR G +D A + M
Sbjct: 464 FIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRM 523
Query: 230 S-KRDAVSWNSLIS 242
+ DAV W +L+
Sbjct: 524 PMEADAVIWAALLG 537
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 23/151 (15%)
Query: 306 FVNNEQYEEAFRW-----FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
F+++ ++ RW FI +LR S T L Q ++ A ++
Sbjct: 52 FIDDTLTQKHPRWVLEEHFISLLR----------------SCKTVALLQ--KVQAQIITH 93
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ + + ++V+ + + A +F + + + +N++ G+ N E + LF
Sbjct: 94 GFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLF 153
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
KMK + PN TF VL +C +G EG
Sbjct: 154 GKMKSMDVRPNCFTFPLVLKSCAKIGAFVEG 184
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 302/564 (53%), Gaps = 41/564 (7%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVI---------EAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
V+ ++ G +GY V AR +FD P+ V W A+ GY
Sbjct: 44 VQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAF 103
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
+ + LF M+ + N T ++ ++C + + EG ++H V + G + + + +
Sbjct: 104 YREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATT 163
Query: 209 IITMY--GR---------LGFMDE--------------------ANKVFSMMSKRDAVSW 237
+I +Y GR +G ++ A ++F + +RD V W
Sbjct: 164 LIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLW 223
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N ++SGY+ G+++ A +LF+ MP +D +SW TM+ G+++ G++E +LF MPE++
Sbjct: 224 NIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVF 283
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+W +I G+ +N + E R F ML V PN TL +VLSA A L+ G +H +
Sbjct: 284 SWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVY 343
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+ + + + N+L+ +YSKCG + +A +F ++D ++++++NSMI G A +G G +A
Sbjct: 344 AATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADA 403
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L LF +MK G P+ ITF+ VL +C H+GLVEEG YF SM Y+I P EHY CMVD
Sbjct: 404 LTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVD 463
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+ GRAG L AI+ + M E +W ALLGA R + N+DLA+LA Q L+ LEP +
Sbjct: 464 LFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPAN 523
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
YV+LS++Y +G+ +D R+++ + +K PGCS I + D V F + + KEI
Sbjct: 524 YVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEI 583
Query: 597 EVTLQTISKGTKEFDWPKHDWSLL 620
L+ + K + F + + LL
Sbjct: 584 YGVLKGLMKLLRSFGYGPNMMELL 607
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 7/275 (2%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
+I A+++F M RN V++ +MI+G++ A L+ P R D V N ++SGY
Sbjct: 173 AIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPER--DVVLWNIMVSGY 230
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+++G + A ++F+ M +D ++W +M++GY G V ++F++MPE+NV +W ++
Sbjct: 231 IEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIG 290
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY CF + F M G+ N TL + AC R G VH + GF
Sbjct: 291 GYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFK 350
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
I +GN++I MY + G ++ A +VF M +D ++WNS+I G +G +A LF +M
Sbjct: 351 GSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQM 410
Query: 261 P----GKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
D +++ ++ + G +E+ FN M
Sbjct: 411 KINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSM 445
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 166/395 (42%), Gaps = 64/395 (16%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+V + GF Y+ + +++T + L M A +F WN++ GY HN
Sbjct: 43 KVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNA 102
Query: 249 EIEEAYRLFERMP----------------------------------------GKDFVSW 268
E LF +M G FV+
Sbjct: 103 FYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVA- 161
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
TT+I +S + + +LF M E++ V WT++ISG++ + A R F D+
Sbjct: 162 TTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLF------DLA 215
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYR 387
P + VL + + G A + M D N++++ Y+ G+V +
Sbjct: 216 PER---DVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQ 272
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL-VPNQITFLSVLSACNHVG 446
+F + ERN+ S+N +I G+A NG E L F++M +GL VPN T ++VLSAC +G
Sbjct: 273 LFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLG 332
Query: 447 LVEEG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
++ G +Y ++ +I G ++D+ + G + A+++ SM + W
Sbjct: 333 ALDLGKWVHVYAATIGFKGSIYVGNA----LIDMYSKCGLIENAMEVFESMDLKDLI-TW 387
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMEL---EPDSAT 535
+++ TH L H M++ +PD T
Sbjct: 388 NSMICGLATH-GCGADALTLFHQMKINGEKPDGIT 421
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 16/254 (6%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA--- 57
M R + S+N M+ NN + ++F MP RN S+ +I G+ G F+E
Sbjct: 246 MPYRDTMSWNTMLNGYANNG-DVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRC 304
Query: 58 -EELYVNMPARWRDSVCSNALIS----GYLKVGRCEEAARIFEAMV--EKDVVAWGSMVD 110
+ + ++ D+ L + G L +G+ ++ A + + + +++D
Sbjct: 305 FKRMLIDGLVVPNDATLVTVLSACARLGALDLGK---WVHVYAATIGFKGSIYVGNALID 361
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K G + A E+F+ M K+++ W +M+ G C D LF M+ G + IT
Sbjct: 362 MYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGIT 421
Query: 171 LTILFEACGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
+ +C EG + +V+ + I ++ ++GR G +D A + M
Sbjct: 422 FIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRM 481
Query: 230 S-KRDAVSWNSLIS 242
+ DAV W +L+
Sbjct: 482 PMEADAVIWAALLG 495
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L S T L Q ++ A ++ + + + ++V+ + + A +F + + +
Sbjct: 31 LLRSCKTVALLQ--KVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKV 88
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+N++ G+ N E + LF KMK + PN TF VL +C +G EG
Sbjct: 89 ELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEG 142
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 200/593 (33%), Positives = 306/593 (51%), Gaps = 48/593 (8%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN Y K G A F+ +V ++ ++++ Y K + AR++FD++P+ ++
Sbjct: 47 SNHFTLLYSKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDI 106
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V++ ++ Y LF +R + TL+ + ACG Q+H
Sbjct: 107 VSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVR--QLHCF 164
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK---RDAVSWNSLISGYVHNGEI 250
V G+D + N+++ Y R GF++EA +VF M + RD VSWN++I + E
Sbjct: 165 VVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREG 224
Query: 251 EEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM--------------- 291
EA LF M + D + +++T F+ +L ++ MM
Sbjct: 225 LEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGL 284
Query: 292 ---------------------PEKDDVTWTAIISGFVNNEQYEEAFRW-FIEMLRKDVRP 329
D V W +ISGF E E W F EM P
Sbjct: 285 IDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHP 344
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRI 388
+ + V SA + ++ + G Q+HA +K ++ + VS+ N+LV++YSKCGNV DA R+
Sbjct: 345 DDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRV 404
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + E N+VS NSMI+G+AQ+G+ E+L LF M + + PN ITF++VLSAC H G V
Sbjct: 405 FDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKV 464
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
EEG YF MK + IEP EHY+CM+D+LGRAG L EA +I +M F P W LLG
Sbjct: 465 EEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLG 524
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R H N++LA AA ++LEP +A PYV+LS++Y+ + + V+ + + ++K
Sbjct: 525 ACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKK 584
Query: 569 PGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
PGCSWI + KVH+F+A S +KEI V + I + K+ + P W+L+
Sbjct: 585 PGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALV 637
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 209/503 (41%), Gaps = 90/503 (17%)
Query: 16 LINNNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCS 74
L+ + C S++ A F N SY +I + + + + A +++ +P D V
Sbjct: 52 LLYSKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQP--DIVSY 109
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKD-----------VVAWG----------------- 106
N LI+ Y G C A R+F + E ++A G
Sbjct: 110 NTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCG 169
Query: 107 ---------SMVDGYCKKGRVIEAREIFDKMPE---KNVVAWTAMVDGYMKVDCFEDGFD 154
+++ Y +KG + EAR +F +M E ++ V+W AM+ + + +
Sbjct: 170 YDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVE 229
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
LF M R G+ + T+ + A G+Q HG++ + GF + +G+ +I +Y
Sbjct: 230 LFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYS 289
Query: 215 RL-GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI-EEAYRLFERMPGK-------DF 265
+ G M E KVF ++ D V WN++ISG+ ++ E+ F M F
Sbjct: 290 KCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSF 349
Query: 266 VSWTTMITGFSSK---------------------------------GNLEKSIELFNMMP 292
V T+ + SS GN+ + +F+ MP
Sbjct: 350 VCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP 409
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
E + V+ ++I+G+ + E+ R F ML+KD+ PN +T +VLSA T + +G +
Sbjct: 410 EHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQK 469
Query: 353 -IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISGFAQN 410
+ + +E + + ++ L + G + +A RI + + + +++ ++
Sbjct: 470 YFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKH 529
Query: 411 G---LGEEALNLFRKMKDEGLVP 430
G L +A N F +++ P
Sbjct: 530 GNVELAVKAANEFLQLEPYNAAP 552
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 73/349 (20%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T L +AC G +H L + L N +Y + G + A F +
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
+ S+N+LI+ Y + I A ++F+ +P D VS+ T+I ++ +G ++ LF
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130
Query: 290 MMPE-----------------KDDVTWT------AIISGF-----VNNEQ---------Y 312
+ E DDV ++ G+ VNN
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFL 190
Query: 313 EEAFRWFIEM------------------------------LRKDVRP----NQLTLSSVL 338
EA R F EM R+ VR + T++SVL
Sbjct: 191 NEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVL 250
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC-GNVVDAYRIFTNIDERNI 397
+A L G Q H ++K + + + L+ LYSKC G +V+ ++F I ++
Sbjct: 251 TAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDL 310
Query: 398 VSYNSMISGFAQ-NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
V +N+MISGF+Q L E+ + FR+M+ G P+ +F+ V SAC+++
Sbjct: 311 VLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNL 359
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 8/229 (3%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
S CSN VG+ A I + V ++V Y K G V +AR +FD MPE
Sbjct: 354 SACSNL---SSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPE 410
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
N+V+ +M+ GY + + LF M + +A N+IT + AC + EG +
Sbjct: 411 HNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKY 470
Query: 191 HGLV-SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNG 248
++ RF + + + +I + GR G + EA ++ M ++ W +L+ +G
Sbjct: 471 FNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHG 530
Query: 249 EIEEAYRL---FERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+E A + F ++ + + + ++S E++ + +M E+
Sbjct: 531 NVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRER 579
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 329 PNQL-TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P QL T ++L A A L G +HA K + + N LYSKCG++ +A
Sbjct: 6 PLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQT 65
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
F N+ SYN++I+ +A++ L ++L R++ DE P+ +++ ++++A G
Sbjct: 66 SFDLTQYPNVFSYNTLINAYAKHSL----IHLARQVFDEIPQPDIVSYNTLIAAYADRGE 121
Query: 448 VEEGFIYFKSMKTL 461
F ++ L
Sbjct: 122 CRPALRLFAEVREL 135
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 202/635 (31%), Positives = 328/635 (51%), Gaps = 107/635 (16%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
IY+A +F MP+++ S+ +++G+ + G EA ++ MP DSV A+I GY
Sbjct: 64 IYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPE--PDSVSWTAMIVGYN 121
Query: 83 KVGRCEEAARIFEAMVEKD------------------------------VVAWG------ 106
++G+ E A +F MV D VV G
Sbjct: 122 QMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYIS 181
Query: 107 ---SMVDGYCKKGRVIEAREIFDKMP-------------------------------EKN 132
S+++ Y K G + A+ +FD+M E++
Sbjct: 182 VANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERD 241
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVH 191
VV+W AM+ GY + + D+F M + + TL AC + G Q+H
Sbjct: 242 VVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIH 301
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF--SMMSKRDAVSWNSLISGYVHNGE 249
+ R FD +GN++I+MY + G ++ A K+ SM+S D +++ +L+ GYV G+
Sbjct: 302 AHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGD 361
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
I A R+F+ + +D V+WT MI G+ G + ++ELF
Sbjct: 362 INPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFR-------------------- 401
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
M+++ +PN TL+++LS S++ A+L+ G QIHA + S VS+
Sbjct: 402 -----------SMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVS 450
Query: 370 NSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
N+L+++Y+K G++ DA +F I +R+ +++ SMI AQ+GLGEEAL LF +M + G+
Sbjct: 451 NALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGI 510
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
P+ IT++ VLSAC HVGLVE+G Y+ M+ + I P P HYACM+D+ GRAG L EA
Sbjct: 511 KPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAH 570
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
I +M EP WG+LL + + H N++LA++AA+ L+ +EP+++ Y L+++YS G
Sbjct: 571 AFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACG 630
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ + +R K K ++K G SW+ +K+KVH+F
Sbjct: 631 QWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIF 665
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 241/502 (48%), Gaps = 66/502 (13%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N L++ Y K G +A R+F+ M K V +W ++ GY K GR+ EA +F++MPE + V
Sbjct: 52 NNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSV 111
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WTAM+ GY ++ FE+ +F M + TLT + +C G +VH V
Sbjct: 112 SWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFV 171
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G I + NS++ MY + G A VF M + SWN++IS ++ +G ++ A
Sbjct: 172 VKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQ 231
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
FE+M +D VSW MI+G++ G +++++F+ M
Sbjct: 232 VQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKM----------------------- 268
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
++ +P++ TL+S LSA A L G QIHAH+++ ++ ++ N+L+S
Sbjct: 269 -------LMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALIS 321
Query: 375 LYSKCGNV-----------------------VDAY----------RIFTNIDERNIVSYN 401
+YSK G V +D Y RIF ++ R++V++
Sbjct: 322 MYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWT 381
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MI G+ QNG ++A+ LFR M EG PN T ++LS + + ++ G S
Sbjct: 382 AMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRS 441
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
N A ++ + ++GS+ +A + N + ++ W +++ A H + A
Sbjct: 442 GNASSVSVSNA-LITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALT 500
Query: 522 AAQHLME--LEPDSATPYVVLS 541
+ ++E ++PD T VLS
Sbjct: 501 LFERMLENGIKPDHITYVGVLS 522
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 63/288 (21%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H + + G + L N+++ Y + GF+ +A++VF M + SWN ++SGY
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
G +EEA+R+FE MP D VSWT MI G++ G
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMG--------------------------- 124
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
Q+E A F EM+ DV P Q TL++VL++ AA L G ++H+ VVK + S +
Sbjct: 125 ----QFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYI 180
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNID-------------------------------ER 395
S+ NSL+++Y+K G+ V A +F + ER
Sbjct: 181 SVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIER 240
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSAC 442
++VS+N+MISG+ Q+G EAL++F KM D P++ T S LSAC
Sbjct: 241 DVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSAC 288
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 199/612 (32%), Positives = 316/612 (51%), Gaps = 45/612 (7%)
Query: 10 NAMITALINNNCSIYE------AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
N ++ A I C +E A +F TMP N + MI G+ R G A +Y
Sbjct: 50 NPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCE 109
Query: 64 MPAR--WRDSVCSNALISGY-----LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
M R D L+ + +K GR E I + +V +++ Y G
Sbjct: 110 MLERGVMPDEYTYPFLLKRFTRDTAVKCGR-ELHDHIVKLGFSSNVFVQNALIHLYSLSG 168
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
V AR +FD+ + +VV W M+ GY + F++ LF M R + +SITL +
Sbjct: 169 EVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLS 228
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
AC + G +VH V + +L N++I MY G
Sbjct: 229 ACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACG------------------- 269
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
+++ A +F+ M +D +SWT ++TGF++ G + + F+ MPE+D
Sbjct: 270 ------------DMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDF 317
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+WTA+I G++ +++E F EM +++P++ T+ S+L+A A L G I A+
Sbjct: 318 VSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAY 377
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+ K ++ D + N+L+ +Y CGNV A RIF + R+ +S+ ++I G A NG GEEA
Sbjct: 378 IDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEA 437
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L++F +M + P+++T + VL AC H G+V++G +F M T + IEP HY CMVD
Sbjct: 438 LDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVD 497
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+LGRAG L EA ++I +M +P VWG+LLGA R H + ++A++AAQ ++ELEP++
Sbjct: 498 LLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAV 557
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
YV+L ++Y+ + + VR + I+K+PGCS I + VH F+AG + KEI
Sbjct: 558 YVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEI 617
Query: 597 EVTLQTISKGTK 608
L +S K
Sbjct: 618 YSKLDEMSVDLK 629
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/633 (29%), Positives = 332/633 (52%), Gaps = 57/633 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP RN +S+ ++I+G+ + G + +A EL+ + AR + +G L
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELF--LEAREANLKLDKFTYAGALGFC 158
Query: 86 --RCE-EAARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
RC+ + + +V + V ++D Y K G++ +A +FD+ E++ V+W
Sbjct: 159 GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWN 218
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR---YREGVQVHGLV 194
+++ GY++V E+ +L M R G+ + L + +AC +G+ +H
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYT 278
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI---- 250
++ G ++DI++ +++ MY + G + EA K+FS+M ++ V++N++ISG++ EI
Sbjct: 279 AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEA 338
Query: 251 -EEAYRLFERMPGK---------------------------------------DFVSWTT 270
EA++LF M + D +
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 398
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I ++ G+ E ++ F ++D +WT++I V NEQ E AF F ++ +RP
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPE 458
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ T+S ++SA A A L+ G QI + +K +++ S++ S +S+Y+K GN+ A ++F
Sbjct: 459 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ ++ +Y++MIS AQ+G EALN+F MK G+ PNQ FL VL AC H GLV +
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQ 578
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G YF+ MK Y I P +H+ C+VD+LGR G L++A +LI S F+ P W ALL +
Sbjct: 579 GLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSC 638
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R + + + K A+ LMELEP+++ YV+L ++Y+ G VR + + ++K P
Sbjct: 639 RVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPA 698
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
SWI++ ++ H F S + I L+T+
Sbjct: 699 LSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/474 (30%), Positives = 222/474 (46%), Gaps = 77/474 (16%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
YCK + AR++FD+MPE+N++++ +++ GY ++ +E +LFL R + + T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
CG G +HGLV G + L N +I MY + G +D+A +F +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGK---------------------------- 263
RD VSWNSLISGYV G EE L +M
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 264 --------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF--- 306
D V T ++ ++ G+L+++I+LF++MP K+ VT+ A+ISGF
Sbjct: 272 MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQM 331
Query: 307 --VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
+ +E EAF+ F++M R+ + P+ T S VL A +A TL G QIHA + K N +S
Sbjct: 332 DEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS 391
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D I ++L+ LY+ G+ D + F + +++I S+ SMI QN E A +LFR++
Sbjct: 392 DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 425 DEGLVPNQITFLSVLSACNHVG-----------LVEEGFIYFKSMKT------------- 460
+ P + T ++SAC ++ G F S+KT
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMP 511
Query: 461 LYN---IE---PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
L N IE P Y+ M+ L + GS EA+++ SM A LG
Sbjct: 512 LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLG 565
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 47/334 (14%)
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
A +S ILF+ + G HG + + + + L N+++ MY + + A +
Sbjct: 44 ALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQ 103
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF--------------------------- 257
+F M +R+ +S+NSLISGY G E+A LF
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCD 163
Query: 258 ----ERMPGKDFVSWTT--------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
E + G V+ + +I +S G L++++ LF+ E+D V+W ++ISG
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT---LNQGSQIHAHVVKMNM 362
+V EE +M R + L SVL A + +G IH + K+ M
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ-----NGLGEEAL 417
E D+ ++ +L+ +Y+K G++ +A ++F+ + +N+V+YN+MISGF Q + EA
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
LF M+ GL P+ TF VL AC+ +E G
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 128/261 (49%), Gaps = 14/261 (5%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFY-----EAEELYVNMP 65
TAL++ N S+ EA ++F+ MP +N V+Y AMI+GF++ EA +L+++M
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 66 AR-WRDSVCSNALISGYLKVGRCEEAARIFEAMV-----EKDVVAWGSMVDGYCKKGRVI 119
R S + +++ + E R A++ + D ++++ Y G
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTE 410
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+ + F ++++ +WT+M+D +++ + E FDLF + + T++++ AC
Sbjct: 411 DGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA 470
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F G Q+ G + G D + S I+MY + G M AN+VF + D ++++
Sbjct: 471 DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSA 530
Query: 240 LISGYVHNGEIEEAYRLFERM 260
+IS +G EA +FE M
Sbjct: 531 MISSLAQHGSANEALNIFESM 551
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 25/199 (12%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+ +A + ++ G H H++K ++ + + N+L+++Y KC + A ++F + ERN
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH-----VGLVEEG 451
I+S+NS+ISG+ Q G E+A+ LF + ++ L ++ T+ L C +G + G
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 452 FIYFKSMKT---LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL- 507
+ + L N+ ++D+ + G L +A+ L + E W +L+
Sbjct: 173 LVVVNGLSQQVFLINV---------LIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLIS 222
Query: 508 -----GAGRTHLNLDLAKL 521
GA LNL LAK+
Sbjct: 223 GYVRVGAAEEPLNL-LAKM 240
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 208/630 (33%), Positives = 338/630 (53%), Gaps = 52/630 (8%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYL 82
+A +IF+ M ++A+S+ AMI+G+ + G +A E+Y M D V + ++
Sbjct: 351 DAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACA 410
Query: 83 KVGRCEEAARIFEAMVEKD----VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+GR + ++ E K VV ++++ Y K + +A E+F M EK+VV+W++
Sbjct: 411 CLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSS 470
Query: 139 MVDGYMKVDCFED-GFDLFLSMRR--GGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
M+ G+ CF FD R G + NS+T AC R G ++H V
Sbjct: 471 MIAGF----CFNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVL 526
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R G + + N+++ +Y + G A FS+ S++D VSWN ++SG+V +G + A
Sbjct: 527 RCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALS 586
Query: 256 LFERM---------------------------------PGKDFVSWTT----MITGFSSK 278
LF +M K F+ + ++ ++
Sbjct: 587 LFNQMMYTSLGRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKS 646
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+++K+IE+F M EKD V+W+++I+GF N + +A +F ML V+PN +T + L
Sbjct: 647 KHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-GHVKPNSVTFIAAL 705
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA AAT L G +IHA+V++ + S+ + N+L+ LY KCG A+ F+ E+++V
Sbjct: 706 SACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVV 765
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N M+SGF +GLG+ AL+LF +M + G P+++TF+ ++ AC+ G+V +G+ F
Sbjct: 766 SWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRR 824
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
++I P +HYACMVD+L R G L EA +LIN M +P VWGALL R H +++L
Sbjct: 825 TEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVEL 884
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+LAA+ ++ELEP+ +V+L DLY+ GK RVR + K + + GCSW+ +K
Sbjct: 885 GELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKG 944
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
H FL +S +KEI V L I + K
Sbjct: 945 VTHAFLTDDESHPQIKEINVVLHGIYERMK 974
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 238/460 (51%), Gaps = 49/460 (10%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARW 68
NAM++ L+ I+ A+ +FA MP R+ S+ M+ G+ + G EA +LY M A
Sbjct: 135 NAMLSMLVRFG-EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193
Query: 69 RDSV----CSNALISGY--LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
R V C G ++GR E A + +V ++V Y K G ++ AR
Sbjct: 194 RPDVYTFPCVLRTCGGIPDWRMGR-EVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
++FD M + ++W AM+ G+ + E G +LFL+M + N +T+T + A G
Sbjct: 253 KVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
++HG + GF D+ NS+I MY LG M +A K+FS M +DA+SW ++IS
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372
Query: 243 GY-----------------VHN------------------GEIEEAYRLFERMPGKDFVS 267
GY +HN G ++ +L E K F+
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432
Query: 268 WT----TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ ++ ++ +++K+IE+F M EKD V+W+++I+GF N + +A +F ML
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML 492
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
V+PN +T + LSA AAT L G +IHA+V++ + S+ + N+L+ LY KCG
Sbjct: 493 -GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
A+ F+ E+++VS+N M+SGF +GLG+ AL+LF +M
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM 591
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 191/384 (49%), Gaps = 40/384 (10%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+M+ + G + A +F KMPE++V +W MV GY KV E+ DL+ M GM
Sbjct: 136 AMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRP 195
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T + CG +R G +VH V RFGF ++ + N+++TMY + G + A KVF
Sbjct: 196 DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVF 255
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLF------ERMPGKDFVSWTTMITG------ 274
M+ D +SWN++I+G+ N E E LF E P ++ T+ +G
Sbjct: 256 DGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG 315
Query: 275 ---------------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
++S G + + ++F+ M KD ++WTA+ISG+
Sbjct: 316 FAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYE 375
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N ++A + M +V P+ +T++S L+A A L+ G ++H V
Sbjct: 376 KNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVV 435
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ N+L+ +Y+K ++ A +F + E+++VS++SMI+GF N +AL FR M
Sbjct: 436 VANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH- 494
Query: 428 LVPNQITFLSVLSACNHVGLVEEG 451
+ PN +TF++ LSAC G + G
Sbjct: 495 VKPNSVTFIAALSACAATGALRSG 518
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 138/273 (50%), Gaps = 39/273 (14%)
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ + LGN++++M R G + A +VF+ M +RD SWN ++ GY G +EEA L+ RM
Sbjct: 129 FGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRM 188
Query: 261 ----------------------P-----------------GKDFVSWTTMITGFSSKGNL 281
P G + ++T ++ G++
Sbjct: 189 LWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDI 248
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ ++F+ M D ++W A+I+G N + E F+ ML +V+PN +T++SV AS
Sbjct: 249 VAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVAS 308
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ + ++H VK DV+ NSL+ +Y+ G + DA +IF+ ++ ++ +S+
Sbjct: 309 GMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWT 368
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+MISG+ +NG ++AL ++ M+ + P+ +T
Sbjct: 369 AMISGYEKNGFPDKALEVYALMELHNVNPDDVT 401
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ N+++S+ + G + A+R+F + ER++ S+N M+ G+ + G EEAL+L+ +M G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 428 LVPNQITFLSVLSACNHV 445
+ P+ TF VL C +
Sbjct: 193 MRPDVYTFPCVLRTCGGI 210
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/612 (30%), Positives = 318/612 (51%), Gaps = 56/612 (9%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------ 64
TAL+N I A +F +P RN V++ A+ITG+ + G A EL+ M
Sbjct: 176 TALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVR 235
Query: 65 PARW----RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
P R+ S CS G+++ GR + + E D +++D YCK R++
Sbjct: 236 PDRFVLASAASACSGL---GFVEGGR-QIHGYAYRTAAESDASVVNALIDLYCKCSRLLL 291
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD M +N+V+WT M+ GYM+ + +F + + G + T + +CG
Sbjct: 292 ARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGS 351
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+G QVH V + + D + N++I MY + + EA VF +++ DA+S+N++
Sbjct: 352 LAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAM 411
Query: 241 ISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL--------- 287
I GY G++ A +F +M +++ +++ SS+ +LE S ++
Sbjct: 412 IEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGT 471
Query: 288 --------------------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
F++M +D V W A+I G NE+ EEA + F
Sbjct: 472 SLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFAR 531
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
+ + PN+ T ++++ ++ A++ G Q HA ++K +SD I N+L+ +Y+KCG
Sbjct: 532 LRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGF 591
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ + +F + ++++ +NSMIS +AQ+G EEAL++F M+ G+ PN +TF+SVLSA
Sbjct: 592 IEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSA 651
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C H GLV+EG +F SMKT Y +EPG EHYA +V++ GR+G L A + I M EP
Sbjct: 652 CAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVAT 711
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
+W +LL A N+++ + A + + +P + P V++S++Y+ G D ++R
Sbjct: 712 IWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGMD 771
Query: 562 LKRIRKSPGCSW 573
+ K PG SW
Sbjct: 772 CAGVVKEPGYSW 783
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 200/409 (48%), Gaps = 64/409 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D +N L+ GY K+GR +A R+F++M +++V+WGS + Y + GR +A +F P
Sbjct: 64 DLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFP 123
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
A A DG N L AC + R G Q
Sbjct: 124 S----AGAASPDGEPP---------------------NEFLLASALRACAQSRAARFGEQ 158
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG+ ++ G D ++ +G +++ +Y + G +D A VF + R+ V+W ++I+GY G+
Sbjct: 159 VHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQ 218
Query: 250 IEEAYRLFERM-------------------PGKDFVSWTTMITGFSSKGNLEKSIE---- 286
A LF RM G FV I G++ + E
Sbjct: 219 AGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNA 278
Query: 287 ----------------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
LF+ M ++ V+WT +I+G++ N EA F ++ + +P+
Sbjct: 279 LIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPD 338
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+S+L++ + A + QG Q+HAHV+K ++ESD ++N+L+ +Y+KC ++ +A +F
Sbjct: 339 VFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFE 398
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ E + +SYN+MI G+A+ G A+ +F KM+ L P+ +TF+S+L
Sbjct: 399 ALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLL 447
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 237/520 (45%), Gaps = 52/520 (10%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP---ARWRDSVCSNA-LISG 80
+A +F +MP RN VS+ + I+ + + G +A L+ P A D N L++
Sbjct: 83 DARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLAS 142
Query: 81 YLKVGRCEEAARIFEAM--------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
L+ AAR E + ++ +V ++V+ Y K GR+ A +FD +P +N
Sbjct: 143 ALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARN 202
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
V WTA++ GY + +LF M G+ + L AC G Q+HG
Sbjct: 203 PVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHG 262
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
R + D + N++I +Y + + A ++F M R+ VSW ++I+GY+ N E
Sbjct: 263 YAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTE 322
Query: 253 AYRLFERMP----GKDFVSWTTMITGFSS---------------KGNLE----------- 282
A +F ++ D + T+++ S K +LE
Sbjct: 323 AMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALID 382
Query: 283 ---------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ +F + E D +++ A+I G+ A F +M ++P+ LT
Sbjct: 383 MYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLT 442
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
S+L S++ + L QIH +VK D+ ++L+ +YSK V DA +F+ +
Sbjct: 443 FVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQ 502
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
R++V +N+MI G AQN GEEA+ LF +++ GL PN+ TF+++++ + + + G
Sbjct: 503 NRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHG-Q 561
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
F + + P ++D+ + G + E L S
Sbjct: 562 QFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFES 601
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
HA V + D+ + N L+ YSK G + DA R+F ++ RN+VS+ S IS +AQ+G
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 414 EEALNLFRKMKDEGLV------PNQITFLSVLSAC 442
++AL LF G PN+ S L AC
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRAC 147
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 205/649 (31%), Positives = 339/649 (52%), Gaps = 46/649 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA--RWRDSVCSNALISGYLK 83
A +F M R+ V++ MI+G+V G A ELY +M + D+ +++ G
Sbjct: 55 ACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVAC 114
Query: 84 VGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
R + ++ +V E+ V A +++D Y K RV +A +F +P +N V+W A+
Sbjct: 115 ACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNAL 174
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ G++ + F L M G+ + T + L Y+ +Q+H + + G
Sbjct: 175 IAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGV 234
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFS-MMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+D + N+ IT Y + G +++A +VF + RD V+WNS+++ ++ + E A++LF
Sbjct: 235 QFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFL 294
Query: 259 RMPG----KDFVSWTTMITGFSSKGN---------------------------------- 280
M D ++TT+I+ S K N
Sbjct: 295 DMQQFGFEPDIYTYTTIISACSHKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNS 354
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+E ++ +F+ M KD V+W +I++GF E A + F+ M V + S+VL +
Sbjct: 355 MEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRS 414
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+ ATL G QIH VK ES+ + +SL+ +YSKCG + DA + F + + +++
Sbjct: 415 CSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITW 474
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
NS++ +AQ+G G+ AL LF +M+D+ + + ITF++ L+AC+H+GLVE+G KSM +
Sbjct: 475 NSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMAS 534
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
Y I P EHYAC VD+ GRAG L EA LI SM F+P VW LLGA R +++LA
Sbjct: 535 DYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAA 594
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
A HL+ELEP+ YV+LS++Y + + + + + ++++K PG SWI +K++V
Sbjct: 595 QVASHLLELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEV 654
Query: 581 HLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLERDWSYT 629
H F+A + +EI L+ + + K D SLL + D+SYT
Sbjct: 655 HAFIADDRCHSHFEEIYQILEQLMEDIKWLDSVAGSDSLLD-DVDYSYT 702
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 200/395 (50%), Gaps = 47/395 (11%)
Query: 101 DVVAWGSMVDGY--CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
D+ A +++ Y C G + A +FD+M ++ V W M+ GY+ ++L+ S
Sbjct: 33 DIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKS 92
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M+ G+ ++ T + + R G QVH L+ + G++ + G++++ MY +
Sbjct: 93 MKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCER 152
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE-------RMPGKDFVSWTTM 271
+ +A VF + +R++VSWN+LI+G+V G+ + A+ L R+ F T+
Sbjct: 153 VRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTL 212
Query: 272 --------------------------------ITGFSSKGNLEKSIELFN-MMPEKDDVT 298
IT +S G+LE + +F+ + +D VT
Sbjct: 213 LDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVT 272
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W ++++ F+ +++ E AF+ F++M + P+ T ++++SA + + G +H V+
Sbjct: 273 WNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHK---DNGKSLHGLVI 329
Query: 359 KMNMESDVSIQNSLVSLY--SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
K +E V I N+++++Y S ++ DA +F +++ ++ VS+NS+++GF+Q G E A
Sbjct: 330 KRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENA 389
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
L LF M+ + + F +VL +C+ + ++ G
Sbjct: 390 LKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLG 424
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
S G L + LF+ M +D VTW +ISG+VN+ A+ + M + P+ T S
Sbjct: 48 SSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGS 107
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L A L+ G Q+H+ +VKM E V ++L+ +Y+KC V DA+ +F I RN
Sbjct: 108 ILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRN 167
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
VS+N++I+GF G + A L R M++EG+ + TF +L+ L++E Y
Sbjct: 168 SVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLT------LLDEKKFYKL 221
Query: 457 SMKTLYNIEPGPEHY---ACMVDI--LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
+M+ I + C I + GSL +A + + W ++L A
Sbjct: 222 TMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFL 281
Query: 512 TH--------LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR---MKK 560
H L LD+ + EPD T ++ S K +G + +K+
Sbjct: 282 AHDRKETAFKLFLDMQQFG------FEPDIYTYTTII----SACSHKDNGKSLHGLVIKR 331
Query: 561 KLKRIRKSPGCSWII 575
L+++ P C+ +I
Sbjct: 332 GLEQL--VPICNAVI 344
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 118/257 (45%), Gaps = 11/257 (4%)
Query: 10 NAMITALINNNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
NA+I + ++ S+ +A +F +M ++ VS+ +++TGF + G A +L+V+M
Sbjct: 341 NAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAV 400
Query: 69 RD-------SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
D +V + L++G+ + D VA S++ Y K G + +A
Sbjct: 401 VDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVA-SSLIFMYSKCGMIEDA 459
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
R+ F+K + + + W +++ Y + + LF MR + + IT AC
Sbjct: 460 RKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHI 519
Query: 182 FRYREG-VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNS 239
+G + + S +G + + ++GR G++DEA + SM DA+ W +
Sbjct: 520 GLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKT 579
Query: 240 LISGYVHNGEIEEAYRL 256
L+ G+IE A ++
Sbjct: 580 LLGACRACGDIELAAQV 596
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 273/470 (58%), Gaps = 2/470 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACG 179
AR + PE + + +V GY + D + +F+ M R G F +S + + +A
Sbjct: 50 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 109
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F R G Q+H + G + + +G ++I MYG G ++ A KVF M + + V+WN+
Sbjct: 110 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 169
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+I+ ++ A +F++M ++ SW M+ G+ G LE + +F+ MP +DDV+W
Sbjct: 170 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 229
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+ +I G +N + E+F +F E+ R + PN+++L+ VLSA + + + G +H V K
Sbjct: 230 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 289
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALN 418
VS+ N+L+ +YS+CGNV A +F + E R IVS+ SMI+G A +G GEEA+
Sbjct: 290 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 349
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M G+ P+ I+F+S+L AC+H GL+EEG YF MK +Y+IEP EHY CMVD+
Sbjct: 350 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 409
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR+G L +A D I M P VW LLGA +H N++LA+ Q L EL+P+++ V
Sbjct: 410 GRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 469
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
+LS+ Y+ GK +D +R ++RI+K+ S + + ++ F AG K
Sbjct: 470 LLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEK 519
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 13/289 (4%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NA+I+ + A IF+ M+ ++ +W M+ GY K G + A+ IF +MP ++ V
Sbjct: 168 NAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDV 227
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W+ M+ G F + F F ++R GM+ N ++LT + AC + + G +HG V
Sbjct: 228 SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV 287
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G+ + + + N++I MY R G + A VF M KR VSW S+I+G +G+ EEA
Sbjct: 288 EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 347
Query: 254 YRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDDVTWTAIIS 304
RLF M D +S+ +++ S G +E+ + F+ M E + + ++
Sbjct: 348 VRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 407
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+ + + ++A+ + +M + P + ++L A ++ + Q+
Sbjct: 408 LYGRSGKLQKAYDFICQM---PIPPTAIVWRTLLGACSSHGNIELAEQV 453
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 198/588 (33%), Positives = 316/588 (53%), Gaps = 81/588 (13%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+I+GY + R +A ++F+ M +DVV+W SM+ G G + A +FD+MPEKNV++W
Sbjct: 49 MIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISW 108
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
T MV+GY+K E LFL M
Sbjct: 109 TTMVNGYLKFGRVELAQRLFLDMHVK---------------------------------- 134
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
D+ N+++ Y G ++E ++F M RD +SW S+I G NG+ EEA +
Sbjct: 135 -----DVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFV 189
Query: 257 FERM------PG----------------------------------KDFVSWTTMITGFS 276
F++M P +F+S ++IT ++
Sbjct: 190 FKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFIS-VSLITFYA 248
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
+ +E + ++FN K+ V WTA+++ +V N ++++A R F +M + PNQ T S
Sbjct: 249 NCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSI 308
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
L A L++G +IH +K+ +E+DV + NSLV +Y++CGNV A +F NI+E++
Sbjct: 309 TLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKD 368
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
IVS+NS+I G AQ+G G AL F +M G+ PN+ITF +LSAC+ G++ +G +F+
Sbjct: 369 IVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFE 428
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
+ + P+HYACMVDILGR G L EA +L+ M + +W ALL A R H NL
Sbjct: 429 YISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNL 488
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
++A+ AA+H+++LEP+ ++ YV+LS++Y+ G+ D +R+R+K K + K PG SW++L
Sbjct: 489 EVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVL 548
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLE 623
+ K H FL+ +S + I L + K KEF + P ++L +E
Sbjct: 549 RGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVE 596
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 150/592 (25%), Positives = 249/592 (42%), Gaps = 115/592 (19%)
Query: 14 TALINN--NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS 71
T+L N+ N + +A IF +P N Y MI G+ R +A +L+ M R D
Sbjct: 17 TSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR--DV 74
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
V N++I G L G A R+F+ M EK+V++W +MV+GY K GRV A+ +F M K
Sbjct: 75 VSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVK 134
Query: 132 NVVAWTAMVDGYMK-------VDCFED--------------GFDL----------FLSMR 160
+V AW AMV GY + V FE+ G DL F M
Sbjct: 135 DVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKML 194
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
R G+ T + AC + GVQVHG V + G + + S+IT Y ++
Sbjct: 195 RSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIE 254
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSWT----- 269
A+K+F+ ++ V W +L++ YV N + ++A R+F M P + S T
Sbjct: 255 HAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACC 314
Query: 270 ----------------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
+++ ++ GN+ ++ +F + EKD V+W +
Sbjct: 315 GLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNS 374
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
II G + A +F +M+R+ V PN++T + +LSA + + L +G ++ +
Sbjct: 375 IIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYK 434
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
NV+ Y M+ + G +EA L R
Sbjct: 435 ------------------SNVLRPQH------------YACMVDILGRCGKLDEAEELVR 464
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG-PEHYACMVDILGR 480
M + N + +L++LSAC +E + ++ K + ++EP Y + +I
Sbjct: 465 YMP---VKANSMIWLALLSACRVHSNLE---VAERAAKHILDLEPNCSSAYVLLSNIYAS 518
Query: 481 AGSLAEA----IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
AG A+ + + + P W L G L+ D + ++ + E
Sbjct: 519 AGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYE 570
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 109/209 (52%), Gaps = 8/209 (3%)
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
+S+ + ++ ++ N +++A +F+++P + +T MI G++ L +++LF+ M
Sbjct: 12 TLSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSV 71
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+D V+W ++I G ++ A R F EM K+V ++ L L Q +
Sbjct: 72 RDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYL--KFGRVELAQRLFL 129
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
HV DV+ N++V Y + G V + R+F + R+++S+ SMI G NG
Sbjct: 130 DMHV------KDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKS 183
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSAC 442
EEAL +F+KM G+ P TF VLSAC
Sbjct: 184 EEALFVFKKMLRSGVEPTWSTFACVLSAC 212
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 273/470 (58%), Gaps = 2/470 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACG 179
AR + PE + + +V GY + D + +F+ M R G F +S + + +A
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F R G Q+H + G + + +G ++I MYG G ++ A KVF M + + V+WN+
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+I+ ++ A +F++M ++ SW M+ G+ G LE + +F+ MP +DDV+W
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 237
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+ +I G +N + E+F +F E+ R + PN+++L+ VLSA + + + G +H V K
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 297
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALN 418
VS+ N+L+ +YS+CGNV A +F + E R IVS+ SMI+G A +G GEEA+
Sbjct: 298 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M G+ P+ I+F+S+L AC+H GL+EEG YF MK +Y+IEP EHY CMVD+
Sbjct: 358 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 417
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR+G L +A D I M P VW LLGA +H N++LA+ Q L EL+P+++ V
Sbjct: 418 GRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 477
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
+LS+ Y+ GK +D +R ++RI+K+ S + + ++ F AG K
Sbjct: 478 LLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEK 527
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 13/289 (4%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NA+I+ + A IF+ M+ ++ +W M+ GY K G + A+ IF +MP ++ V
Sbjct: 176 NAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDV 235
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W+ M+ G F + F F ++R GM+ N ++LT + AC + + G +HG V
Sbjct: 236 SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV 295
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G+ + + + N++I MY R G + A VF M KR VSW S+I+G +G+ EEA
Sbjct: 296 EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
Query: 254 YRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDDVTWTAIIS 304
RLF M D +S+ +++ S G +E+ + F+ M E + + ++
Sbjct: 356 VRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+ + + ++A+ + +M + P + ++L A ++ + Q+
Sbjct: 416 LYGRSGKLQKAYDFICQM---PIPPTAIVWRTLLGACSSHGNIELAEQV 461
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 298/535 (55%), Gaps = 41/535 (7%)
Query: 96 AMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
+V V GS+V Y + GR+ EA ++FD+M E++V AW AM+ G + + L
Sbjct: 97 GLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGL 156
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
F M G+A +++T++ + C + +H + G D ++ + N++I +YG+
Sbjct: 157 FGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGK 216
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK------------ 263
LG ++EA VF M RD V+WNS+ISG G+ A ++F+ M G
Sbjct: 217 LGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSL 276
Query: 264 ----------------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
D ++ ++ ++ N+E + +F+ MP +D
Sbjct: 277 ASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQD 336
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIH 354
V+W +I+G++ N EA + M + + ++ Q T SVL A + L QG ++H
Sbjct: 337 SVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMH 396
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
A +K+ + DV + L+ LY+KCG + +A +F + R+ +N++ISG +G G
Sbjct: 397 ALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGA 456
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
EAL LF +M+ EG+ P+ +TF+S+L+AC+H GLV++G +F M+ Y+I P +HYACM
Sbjct: 457 EALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACM 516
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
D+LGRAG L EA + I +M +P VWGALLGA R H N+++ K+A+Q+L EL+P++
Sbjct: 517 ADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENV 576
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
YV++S++Y+ +GK + VR + + ++K+PG S I +K V++F +G ++
Sbjct: 577 GYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQT 631
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 174/370 (47%), Gaps = 50/370 (13%)
Query: 189 QVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
Q+H R G + S++ Y R G + EA KVF MS+RD +WN+++SG N
Sbjct: 88 QLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRN 147
Query: 248 GEIEEAYRLFERMPG---------------------------------------KDFVSW 268
EA LF RM G K+
Sbjct: 148 ARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVC 207
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+I + G LE++ +F+ M +D VTW +IISG Q A + F M V
Sbjct: 208 NALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVS 267
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYR 387
P+ LTL S+ SA A +H +V++ + D+ N++V +Y+K N+ A R
Sbjct: 268 PDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQR 327
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACNHVG 446
+F ++ ++ VS+N++I+G+ QNGL EA+ + M K EGL Q TF+SVL A +H+G
Sbjct: 328 MFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLG 387
Query: 447 LVEEGF-IYFKSMKTLYNIEPGPEHY--ACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
+++G ++ S+K N++ Y C++D+ + G LAEA+ L M G W
Sbjct: 388 ALQQGMRMHALSIKIGLNVDV----YVGTCLIDLYAKCGKLAEAMLLFEKMP-RRSTGPW 442
Query: 504 GALLGAGRTH 513
A++ H
Sbjct: 443 NAIISGLGVH 452
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 126/535 (23%), Positives = 227/535 (42%), Gaps = 88/535 (16%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISG 80
I EA+++F M R+ ++ AM++G R EA L+ M D+V ++++
Sbjct: 119 ISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPM 178
Query: 81 YLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+ +G A + V +K++ +++D Y K G + EA+ +F M +++V W
Sbjct: 179 CVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTW 238
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+++ G + +F MR G++ + +TL L A + R +H V R
Sbjct: 239 NSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMR 298
Query: 197 FGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
G+D DII GN+I+ MY +L ++ A ++F M +D+VSWN+LI+GY+ NG EA
Sbjct: 299 RGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVE 358
Query: 256 LFERMPGKD--------FVS--------------------------------WTTMITGF 275
+ M + FVS T +I +
Sbjct: 359 RYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLY 418
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ G L +++ LF MP + W AIISG + EA F M ++ ++P+ +T
Sbjct: 419 AKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFV 478
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L+A + ++QG S + ++V +
Sbjct: 479 SLLAACSHAGLVDQG-------------------RSFFDVMQVTYDIVPIAK-------- 511
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
Y M + G +EA N + M + P+ + ++L AC G VE G +
Sbjct: 512 ---HYACMADMLGRAGQLDEAFNFIQNMP---IKPDSAVWGALLGACRIHGNVEMGKV-- 563
Query: 456 KSMKTLYNIEP-GPEHYACMVDILGRAG---SLAEAIDLINSMTFEPPPGVWGAL 506
+ + L+ ++P +Y M ++ + G + E L+ + PG W ++
Sbjct: 564 -ASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPG-WSSI 616
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 19/256 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS-- 79
+I A +F +MP++++VS+ +ITG+++ G+ EA E Y +M +S
Sbjct: 321 NIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVL 380
Query: 80 -GYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
Y +G ++ R+ ++ DV ++D Y K G++ EA +F+KMP ++
Sbjct: 381 PAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTG 440
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W A++ G + LF M++ G+ + +T L AC +G ++
Sbjct: 441 PWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVM 500
Query: 195 SRFGFDYDII----LGNSIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGE 249
YDI+ + M GR G +DEA N + +M K D+ W +L+ +G
Sbjct: 501 Q---VTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGN 557
Query: 250 IE----EAYRLFERMP 261
+E + LFE P
Sbjct: 558 VEMGKVASQNLFELDP 573
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 13/172 (7%)
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCGNVVDAY 386
RP+ T S++ A+ + A+ +Q+HA +++ + V SLV Y + G + +AY
Sbjct: 67 RPDGFTFPSLIRAAPSNAS---AAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAY 123
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
++F + ER++ ++N+M+SG +N EA+ LF +M EG+ + +T SVL C
Sbjct: 124 KVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMC---- 179
Query: 447 LVEEGFIYFKSMKTLYNIEPG--PEHYAC--MVDILGRAGSLAEAIDLINSM 494
V G + +Y ++ G E + C ++D+ G+ G L EA + + M
Sbjct: 180 -VLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGM 230
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/523 (33%), Positives = 294/523 (56%), Gaps = 7/523 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y +G AR IFD+ EKNVV + M+ Y+ + + + +F M +
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + +AC R G+QVH + + G D ++ +GN+++ MYG+ G + EA KV
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF------VSWTTMITGFSSKGNL 281
M RD VSWNS+++GY +G+ ++A + + M + ++ + + ++S N+
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ +F M +K+ ++W +I+ +VNN EA F++M ++P+ +T++S+L A
Sbjct: 257 QYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPAC 316
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ L G ++H ++ K N+ ++ ++N+L+ +Y+KCG + +A +F + R++VS+
Sbjct: 317 GDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWT 376
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
SM+S + ++G G +A+ LF KM D G P+ I F+SVLSAC+H GL+++G YF+ M
Sbjct: 377 SMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQ 436
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I P EH+ACMVD+ GRAG + EA I M EP VWGALL A R H +D+ +
Sbjct: 437 YGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLV 496
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA L +L P + YV+LS++Y+ G +D VR K I+K PG S + L +VH
Sbjct: 497 AADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVH 556
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLE 623
FLAG + K I L + KE + P+ + +L +E
Sbjct: 557 TFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVE 599
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 180/399 (45%), Gaps = 66/399 (16%)
Query: 9 YNAMITALINNNCSIYEAFEIFATM------PMRNAVSYAAMITGF-----VRRGMFYEA 57
+N MI + +NNN + EA IF M P + ++ ++ +R G+
Sbjct: 105 FNVMIRSYVNNNLYV-EALSIFQVMLSCAFNP--DHYTFPCVLKACSGLDNLRVGLQVHD 161
Query: 58 EELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
+ V + + NAL++ Y K G EA ++ + M +DVV+W SMV GY + G+
Sbjct: 162 AIVKVGLDT---NLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQ 218
Query: 118 VIEAREI-------------------------------------FDKMPEKNVVAWTAMV 140
+A EI F++M +KN+++W M+
Sbjct: 219 FDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMI 278
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
Y+ + LFL M GM +++T+ L ACG G ++H + +
Sbjct: 279 AIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLR 338
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+++L N+++ MY + G ++EA VF M RD VSW S++S Y +G+ +A LF +M
Sbjct: 339 PNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKM 398
Query: 261 ----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQ 311
D +++ ++++ S G L++ F MM E+ + + ++ F +
Sbjct: 399 LDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGE 458
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
EEA+ + +M + PN+ ++LSA + ++ G
Sbjct: 459 VEEAYSFIKQM---PMEPNERVWGALLSACRVHSKMDIG 494
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 220/506 (43%), Gaps = 63/506 (12%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGY- 81
IF +N V + MI +V ++ EA ++ M P + C SG
Sbjct: 93 IFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFP-CVLKACSGLD 151
Query: 82 -LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
L+VG A I + ++ ++ ++V Y K G + EAR++ D+MP ++VV+W +MV
Sbjct: 152 NLRVGLQVHDA-IVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMV 210
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ-VHGLVSRFGF 199
GY + F+D ++ M + ++ T+ L + E VQ +H + R
Sbjct: 211 AGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC--YTSLENVQYIHNMFERMT- 267
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMS----KRDAVSWNSLISGYVHNGEIEEAYR 255
++I N +I +Y +EA +F M K DAV+ SL+ + R
Sbjct: 268 KKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRR 327
Query: 256 LFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
L + + + + ++ ++ G LE++ ++F+ M +D V+WT+++S + + Q
Sbjct: 328 LHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQ 387
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
+A F +ML P+ + SVLSA + T L+QG H +M E
Sbjct: 388 GYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR----HYFRMMTEQ------- 436
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
Y I I+ + M+ F + G EEA + ++M E PN
Sbjct: 437 --------------YGIVPRIEH-----FACMVDLFGRAGEVEEAYSFIKQMPME---PN 474
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE-HYACMVDILGRAGSLAEAIDL 490
+ + ++LSAC ++ G + + L+ + P +Y + +I +AG + +++
Sbjct: 475 ERVWGALLSACRVHSKMDIGLV---AADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNV 531
Query: 491 INSMT---FEPPPGVWGALLGAGRTH 513
+M + PG+ L G+ H
Sbjct: 532 RYAMKKIGIKKVPGISNVELN-GQVH 556
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 337 VLSASAATATLNQGSQIHAHVV-KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+L TLN+ +H+ +V ++ D ++ L+ YS G A IF E+
Sbjct: 44 ILDQYPGIKTLNK---LHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEK 100
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLVEE 450
N+V +N MI + N L EAL++F+ M P+ TF VL AC+ VGL
Sbjct: 101 NVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVH 160
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
I + T N+ G +V + G+ G L EA +++ M +
Sbjct: 161 DAIVKVGLDT--NLFIGNA----LVAMYGKCGCLREARKVLDQMPY 200
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/565 (34%), Positives = 305/565 (53%), Gaps = 42/565 (7%)
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-- 160
+A ++ + Y K R +AR +FD+MP ++ VAW A+V GY + + + M+
Sbjct: 52 IASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGE 111
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
GG +S+TL + AC +VH R G D + + +++ Y + G ++
Sbjct: 112 EGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVE 171
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--PGKDF------------- 265
A VF M R++VSWN++I GY NG EA LF RM G D
Sbjct: 172 AARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACG 231
Query: 266 -----------------------VSWT-TMITGFSSKGNLEKSIELFNMMP-EKDDVTWT 300
VS T +IT ++ + + ++FN + +K ++W
Sbjct: 232 ELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWN 291
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+I GF NE E+A R F M ++VRP+ TL SV+ A A + Q IH + ++
Sbjct: 292 AMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRH 351
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
++ DV + +L+ +YSKCG V A R+F + +R+++++N+MI G+ +G G+ A+ LF
Sbjct: 352 QLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELF 411
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+MK G +PN+ TFLSVL+AC+H GLV+EG YF SMK Y +EPG EHY MVD+LGR
Sbjct: 412 EEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGR 471
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA I +M EP V+GA+LGA + H N++LA+ +AQ + EL P+ +V+L
Sbjct: 472 AGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLL 531
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
+++Y+ +D RVR + K ++K+PG S I LK++VH F +G + K+I L
Sbjct: 532 ANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARL 591
Query: 601 QTISKGTKEFDWPKHDWSLLGLERD 625
+ + K+ + S+ +E D
Sbjct: 592 AKLIEEIKDMGYVPDTDSIHDVEDD 616
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 194/430 (45%), Gaps = 50/430 (11%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR----WRDSVCSNALISG 80
+A +F MP R+ V++ A++ G+ R G+ A E V M DSV +++
Sbjct: 69 DARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPA 128
Query: 81 YL---KVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+ C E A A +++ V +++D YCK G V AR +FD MP +N V+W
Sbjct: 129 CADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSW 188
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
AM+DGY + LF M + G+ ++ +ACG E +VH L+ R
Sbjct: 189 NAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVR 248
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMM-SKRDAVSWNSLISGYVHNGEIEEAYR 255
G ++ + N++IT Y + D A +VF+ + +K+ +SWN++I G+ N E+A R
Sbjct: 249 VGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAER 308
Query: 256 LFERM----------------PG-----------------------KDFVSWTTMITGFS 276
LF RM P +D T +I +S
Sbjct: 309 LFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYS 368
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G + + LF+ ++ +TW A+I G+ ++ + A F EM PN+ T S
Sbjct: 369 KCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLS 428
Query: 337 VLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-E 394
VL+A + +++G + A + K +E + ++V L + G + +A+ N+ E
Sbjct: 429 VLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIE 488
Query: 395 RNIVSYNSMI 404
I Y +M+
Sbjct: 489 PGISVYGAML 498
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 145/314 (46%), Gaps = 42/314 (13%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T T L + C G VH + G + I ++ MY + +A +VF M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK------DFVSW--------------- 268
RD V+WN++++GY NG A RM G+ D V+
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 269 --------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
T ++ + G +E + +F+ MP ++ V+W A+I G+ +
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
N EA F M+++ V ++ + L A L++ ++H +V++ + S+VS+
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
N+L++ Y+KC A ++F + +++ +S+N+MI GF QN E+A LF +M+ E
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLEN 317
Query: 428 LVPNQITFLSVLSA 441
+ P+ T +SV+ A
Sbjct: 318 VRPDSFTLVSVIPA 331
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 140/292 (47%), Gaps = 14/292 (4%)
Query: 14 TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TA+++ C ++ A +F MP+RN+VS+ AMI G+ G EA L+ M D
Sbjct: 158 TAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVD 217
Query: 71 SVCSNAL--ISGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREI 124
++ L + ++G +E R+ E +V +V +++ Y K R A ++
Sbjct: 218 VTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQV 277
Query: 125 FDKMPEKNV-VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
F+++ K ++W AM+ G+ + +C ED LF M+ + +S TL + A
Sbjct: 278 FNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISD 337
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+ +HG R D D+ + ++I MY + G + A ++F R ++WN++I G
Sbjct: 338 PLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHG 397
Query: 244 YVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMM 291
Y +G + A LFE M G + ++ +++ S G +++ + F M
Sbjct: 398 YGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASM 449
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P T +++L AA A L G +HA + + S+ +L ++Y KC DA R+
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE--GLVPNQITFLSVLSAC 442
F + R+ V++N++++G+A+NGL A+ +M+ E G P+ +T +SVL AC
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPAC 129
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 27/220 (12%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
+T S+NAMI N C +A +FA M + N F + ++
Sbjct: 285 KTRISWNAMILGFTQNECP-EDAERLFARMQLENVRP-----DSFTLVSVIPAVADISDP 338
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
+ ARW I GY +++DV +++D Y K GRV AR
Sbjct: 339 LQARW---------IHGY-----------SIRHQLDQDVYVLTALIDMYSKCGRVSIARR 378
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD +++V+ W AM+ GY + +LF M+ G N T + AC
Sbjct: 379 LFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGL 438
Query: 184 YREGVQVHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEA 222
EG + + + +G + + +++ + GR G +DEA
Sbjct: 439 VDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEA 478
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 300/529 (56%), Gaps = 48/529 (9%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+ I + + +V ++VD Y K G V A+ +FD+MP +NVV W +++ GY+ V C E
Sbjct: 103 STIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPE 162
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+LFL M + G+ +++ + C R + G+QVHGL + GF Y+I++G +I
Sbjct: 163 IAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLI 222
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE-------IEEAYRLFERMPGK 263
+Y + +D + +F +M +R+ ++W S+++GY H + + + RL R+
Sbjct: 223 DLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRL--- 279
Query: 264 DFVSWTTMITGFSSKGNLE---------------------------------KSIELFNM 290
++V++ +++ FSS +L+ S+E FN
Sbjct: 280 NYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNK 339
Query: 291 MPEK----DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+ D ++W A+I G N E A + F +M + + + T +SVL A +T
Sbjct: 340 VCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMIST 399
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L++G QIHA V+K S++++QN LVS+Y++CG++ DA R+F+ +D +++S+NS++SG
Sbjct: 400 LDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSG 459
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE- 465
A +G G EA+ LF +M+ G+ P+ TFL VLSAC HVGL+++G YF M+ Y++E
Sbjct: 460 CAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYSLES 519
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
P EHY+ MVD+ RAG L+EA D IN+M EP P V+ ALL A + H N+++A A+
Sbjct: 520 PTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCAKK 579
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
L+++ P+ YV+LS++ + +G + +R + +RK PG SWI
Sbjct: 580 LLQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 628
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 214/441 (48%), Gaps = 63/441 (14%)
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
L +++ G A + L + +C + G+Q+H + + GFD ++ + ++++ M
Sbjct: 64 LKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDM 123
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK--- 263
YG+ G + A ++F M R+ V+WNSLISGY+H G E A LF M P
Sbjct: 124 YGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSV 183
Query: 264 ------------------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
+ V T +I +S N++ S +F++MPE
Sbjct: 184 SAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPE 243
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
++ +TWT++++G+ + +Q A +M R +R N +T + +LS+ +++ L+ Q+
Sbjct: 244 RNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQV 303
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKC--GNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
H +++ +ES+ ++ +LV++YS+C ++ D ++ + + + +S+N++I G + G
Sbjct: 304 HCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLG 363
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLY----NIEP 466
GE AL F KM+ G+ + TF SVL A + ++EG I+ +K Y N++
Sbjct: 364 NGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQN 423
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL------GAGRTHLNLDLAK 520
G +V + R GS+ +A + + M W +LL G GR + L
Sbjct: 424 G------LVSMYARCGSINDAKRVFSLMDRHDVIS-WNSLLSGCAYHGYGREAVEL---- 472
Query: 521 LAAQHLMELEPDSATPYVVLS 541
++PD+ T VVLS
Sbjct: 473 FEQMRRSGVKPDNTTFLVVLS 493
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 213/509 (41%), Gaps = 83/509 (16%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSV--CSNALIS 79
++ A +F MP RN V++ ++I+G++ G A EL++ M D +A++
Sbjct: 129 AVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLV 188
Query: 80 GYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G ++ + ++ ++ ++V ++D Y K + +R +FD MPE+N++
Sbjct: 189 GCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIIT 248
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT+MV GY L M+R G+ N +T L + QVH +
Sbjct: 249 WTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRII 308
Query: 196 RFGFDYDIILGNSIITMYGRL--GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
R G + + L +++T+Y +++ NKV S +++ D +SWN++I G + G E A
Sbjct: 309 REGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAA 368
Query: 254 YRLFERMPGK----DFVSWTTMI---------------------TGFSSKGNLEKSI--- 285
+ F +M D ++T+++ G+ S N++ +
Sbjct: 369 LKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSM 428
Query: 286 -----------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+F++M D ++W +++SG + EA F +M R V+P+ T
Sbjct: 429 YARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTF 488
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
VLSA L++G + M +D S+++ YS
Sbjct: 489 LVVLSACRHVGLLDKGLEYFDL-----MRNDYSLESPTTEHYS----------------- 526
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
SM+ F++ G EA + M E P + ++LSAC G VE I
Sbjct: 527 -------SMVDLFSRAGYLSEAEDFINTMPIE---PGPSVYKALLSACQVHGNVE---IA 573
Query: 455 FKSMKTLYNIEPG-PEHYACMVDILGRAG 482
+ K L + P P Y + ++ G
Sbjct: 574 VRCAKKLLQMCPNDPVIYVLLSNVQATVG 602
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 119/235 (50%), Gaps = 9/235 (3%)
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+ P D + + I+ + +Q + ++ + P L+ ++S+ A + ++
Sbjct: 38 LFPGNDFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFV 97
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G Q+H+ ++K+ +S+V I ++LV +Y KCG V A R+F + RN+V++NS+ISG+
Sbjct: 98 GIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLH 157
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT--LYNIEP 466
G E A+ LF +M G+ P + +VL C + + G ++ SMK YNI
Sbjct: 158 VGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVV 217
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
G C++D+ + ++ +A L+ + E W +++ AG H +A +
Sbjct: 218 G----TCLIDLYSKGWNI-DASRLMFDLMPERNIITWTSMV-AGYAHCQQPVAAM 266
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 200/626 (31%), Positives = 322/626 (51%), Gaps = 73/626 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+A R ++N++++ + + + +A +FA MP R+AVS+ M+ G R G F EA +
Sbjct: 93 LARRNVFTWNSLLS-MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 61 YVNMPARWRD----------SVCS---------------------------NALISGYLK 83
++M A S C+ N++++ Y K
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGK 211
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
G E A+ +FE M + V +W +MV GR+ A +F+ MP +++V+W AM+ GY
Sbjct: 212 CGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGY 271
Query: 144 MKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ LF M MA + T+T + AC R G QVH + R Y
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY- 330
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
NS +T N+LIS Y +G +E A R+ ++
Sbjct: 331 ----NSQVT--------------------------NALISTYAKSGSVENARRIMDQSME 360
Query: 263 KDF--VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
D +S+T ++ G+ G++E + E+F +M +D V WTA+I G+ N + +EA F
Sbjct: 361 TDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFR 420
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M+ PN TL++VLS A+ A L+ G QIH ++ +E S+ N+++++Y++ G
Sbjct: 421 SMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSG 480
Query: 381 NVVDAYRIFTNIDERN-IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ A R+F + R +++ SMI AQ+G GEEA+ LF +M G+ P++IT++ VL
Sbjct: 481 SFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVL 540
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
SAC+H G V EG Y+ +K + I P HYACMVD+L RAG +EA + I M EP
Sbjct: 541 SACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPD 600
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
WG+LL A R H N +LA+LAA+ L+ ++P+++ Y ++++YS G+ D R+
Sbjct: 601 AIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKA 660
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLA 585
+K K +RK G SW ++ K+H+F A
Sbjct: 661 RKEKAVRKETGFSWTHIRSKIHVFGA 686
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 242/512 (47%), Gaps = 75/512 (14%)
Query: 72 VCSNALISGYLKV----GRCEEAARIFE--AMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
+C+N L+S Y + G +A R+F+ + ++V W S++ + K GR+ +AR +F
Sbjct: 63 LCNN-LLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVF 121
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+MPE++ V+WT MV G + F + L M G TLT + +C
Sbjct: 122 AEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGA 181
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G +VH V + G + + NS++ MYG+ G + A+ VF M R SWN+++S
Sbjct: 182 VGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNT 241
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
H G ++ A LFE MPG+ VSW MI G++ G K+++LF+ M + +
Sbjct: 242 HLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMA------- 294
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
P++ T++SVLSA A + G Q+HA++++ M +
Sbjct: 295 -----------------------PDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYN 331
Query: 366 VSIQNSLVSLYSKCGNVVDAYRI---------------------------------FTNI 392
+ N+L+S Y+K G+V +A RI F +
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG- 451
+ R++V++ +MI G+ QNG +EA++LFR M G PN T +VLS C + ++ G
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
I+ +++++L +E ++ + R+GS A + + + + W +++ A
Sbjct: 452 QIHCRAIRSL--LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALA 509
Query: 512 THLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
H + A + ++ +EPD T VLS
Sbjct: 510 QHGQGEEAVGLFEEMLRAGVEPDRITYVGVLS 541
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 54/143 (37%), Gaps = 37/143 (25%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNM---------------------------------- 362
+L A G IHA VK +
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91
Query: 363 ---ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+V NSL+S+++K G + DA +F + ER+ VS+ M+ G + G EA+
Sbjct: 92 PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 420 FRKMKDEGLVPNQITFLSVLSAC 442
M +G P Q T +VLS+C
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSC 174
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/606 (30%), Positives = 319/606 (52%), Gaps = 71/606 (11%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
++ SN LI+ Y K+G A +F+ + + ++ +W +++ Y K G + + ++IF+ MP
Sbjct: 39 ETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMP 98
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLF-LSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
++ V+W + GY D ++ L ++ M N IT + + C +F G
Sbjct: 99 FRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGR 158
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFM----------------------------- 219
Q++G + +FGF D+ +G+ ++ MY +LG +
Sbjct: 159 QINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCG 218
Query: 220 --DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------- 260
+E+ ++F + +RD++SW +I+G + NG EA +F M
Sbjct: 219 MIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLT 278
Query: 261 ---------PGKDFVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
GK ++ + ++ +S +++ + +F MP+K+ ++
Sbjct: 279 ACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVIS 338
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA++ G+ N EEA + F EM R V P+ TL SV+S+ A A+L +G+Q H +
Sbjct: 339 WTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRAL 398
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ S +++ N+L++LY KCG+ +++R+FT ++ R+ VS+ ++++G+AQ G E +
Sbjct: 399 VSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIG 458
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M GL P+ +TF+ VLSAC+ GLVE+G YF+SM + I P +H C++D+L
Sbjct: 459 LFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLL 518
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L EA + IN+M P W LL + R H ++++ K AA L+ LEP + YV
Sbjct: 519 GRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYV 578
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
+LS LY+ GK ++R + KR+RK PG SWI K KVH+F A +S L +I
Sbjct: 579 LLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYA 638
Query: 599 TLQTIS 604
L+ ++
Sbjct: 639 ELEKLN 644
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 184/406 (45%), Gaps = 75/406 (18%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L + C + ++H L+ + + L N++IT Y +LG + A+ VF + + +
Sbjct: 11 LLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPN 70
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
SWN+++S Y G + + ++F MP +D VSW I+G+++ G+ ++ ++ +M +
Sbjct: 71 LFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLK 130
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+ N++T S++L + ++ G QI
Sbjct: 131 DAAMNL------------------------------NRITFSTMLILCSKFRCVDLGRQI 160
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS----------- 402
+ ++K SDV + + LV +Y+K G + DA R F + ERN+V N+
Sbjct: 161 NGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMI 220
Query: 403 --------------------MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
MI+G QNGL EAL++FR+M+ G +Q TF SVL+AC
Sbjct: 221 EESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTAC 280
Query: 443 NHVGLVEEG-FIYFKSMKTLY--NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
+ + EG I+ ++T + N+ G + +VD+ + S+ A + M P
Sbjct: 281 GSLLALGEGKQIHAYVIRTDHKDNVFVG----SALVDMYSKCRSIKSAETVFKRM---PQ 333
Query: 500 PGV--WGALL-GAGRTHLNLDLAKLAAQHLME-LEPDSATPYVVLS 541
V W A+L G G+ + + K+ + +EPD T V+S
Sbjct: 334 KNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVIS 379
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 32/149 (21%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+S+L + Q ++H ++K + + + N+L++ Y K GN+ A+ +F +I +
Sbjct: 9 ASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQ 68
Query: 395 RNIVSYNSM-------------------------------ISGFAQNGLGEEALNLFRKM 423
N+ S+N++ ISG+A G +A+ +++ M
Sbjct: 69 PNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLM 128
Query: 424 -KDEGLVPNQITFLSVLSACNHVGLVEEG 451
KD + N+ITF ++L C+ V+ G
Sbjct: 129 LKDAAMNLNRITFSTMLILCSKFRCVDLG 157
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 297/523 (56%), Gaps = 5/523 (0%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ C + A IF N+ + A++ G + FE F+ M R + +
Sbjct: 78 LISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPD 137
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+TL + ++ G +HG V + G ++D + S++ MY ++G + ++F
Sbjct: 138 RLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFD 197
Query: 228 MMSKRDAVS----WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEK 283
+R+ WN LI+G G++ +A LFE MP ++ SW ++I GF G+L++
Sbjct: 198 ESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDR 257
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ ELF MPEK+ V+WT +I+GF N +E+A F ML + VRPN LT+ S L A
Sbjct: 258 ARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTK 317
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
L G +IH ++ + + I +LV +Y+KCGN+ A R+F +++++++ M
Sbjct: 318 IGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVM 377
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I G+A +G ++AL F KMK G+ P+++ FL++L+AC+H G V++G +F+SM+ Y+
Sbjct: 378 IWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYS 437
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
IEP +HY +VD+LGRAG L EA+ I SM P +WGAL A R H N+++A+L A
Sbjct: 438 IEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTA 497
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ L++LEP YV LS++Y+ +G+ D RVR K + + K PG S+I ++ +VH F
Sbjct: 498 EKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSF 557
Query: 584 LAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
+AG + + +EI + L+ I+ K+ + P+ W L +E +
Sbjct: 558 VAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEE 600
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 124/221 (56%), Gaps = 4/221 (1%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N LI+G KVG +AA +FEAM E++ +W S+++G+ + G + ARE+F +MPEKNVV
Sbjct: 212 NVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVV 271
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WT M++G+ + E +F M G+ N +T+ AC + + G ++H +
Sbjct: 272 SWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYL 331
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
S GF + +G +++ MY + G + A++VF +D ++W+ +I G+ +G ++A
Sbjct: 332 SSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQAL 391
Query: 255 RLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMM 291
+ F +M D V + ++T S GN+++ + F M
Sbjct: 392 QCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESM 432
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 66/249 (26%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T +I+ S +L+ ++ +F + + A+I G N ++E + F+ MLR +R
Sbjct: 76 TQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIR 135
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY------------ 376
P++LTL VL + AA + G +H V+K+ +E D ++ SLV +Y
Sbjct: 136 PDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQL 195
Query: 377 -----------------------SKCGNVVDAYRIFTNIDERNIVSYNS----------- 402
K G++ A +F + ERN S+NS
Sbjct: 196 FDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDL 255
Query: 403 --------------------MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
MI+GF+QNG E+AL++F +M +EG+ PN +T +S L AC
Sbjct: 256 DRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLAC 315
Query: 443 NHVGLVEEG 451
+G ++ G
Sbjct: 316 TKIGALQVG 324
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 122/305 (40%), Gaps = 52/305 (17%)
Query: 3 DRTSASYNAMITALINNNCSI---YEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
R A + LIN C + +A +F MP RNA S+ ++I GFVR G A E
Sbjct: 201 QRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARE 260
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA--------------- 104
L+V MP ++ V +I+G+ + G E+A +F M+E+ V
Sbjct: 261 LFVQMPE--KNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKI 318
Query: 105 ------------------------WGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
++VD Y K G + A +F + K+++ W+ M+
Sbjct: 319 GALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMI 378
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
G+ CF+ F+ M+ G+ + + + AC +G+ D
Sbjct: 379 WGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLN---FFESMRLD 435
Query: 201 YDIILG----NSIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
Y I I+ + GR G +DEA + + SM D V W +L + IE A
Sbjct: 436 YSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAEL 495
Query: 256 LFERM 260
E++
Sbjct: 496 TAEKL 500
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
A+ TL Q QIHA + N+ S+ + L+S ++ A IF D N+ +N+
Sbjct: 49 ASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNA 108
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA-----------CNHVGLVEEG 451
+I G A+N E +++ F M + P+++T VL + C H G+++ G
Sbjct: 109 LIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLG 168
Query: 452 F 452
Sbjct: 169 L 169
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/498 (35%), Positives = 274/498 (55%), Gaps = 40/498 (8%)
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
MP++N+V+WTAM+ G + F + F MR G + AC G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
Q+H L +FG ++ +G+++ MY + G M +A KVF M +D VSW ++I GY
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 248 GEIEEAYRLFERMPGK---------------------------------------DFVSW 268
GE EEA F++M + D
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 269 TTMITGFSSKGNLEKSIELFNMMPE-KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+ +S G++E + +F + E ++ V++T +I G+V EQ E+ F+E+ R+ +
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
PN+ T SS++ A A A L QG+Q+HA V+K+N + D + + LV +Y KCG + A +
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
F I + +++NS++S F Q+GLG++A+ +F +M D G+ PN ITF+S+L+ C+H GL
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
VEEG YF SM Y + PG EHY+C++D+LGRAG L EA + IN M FEP W + L
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420
Query: 508 GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRK 567
GA R H + ++ KLAA+ L++LEP ++ V+LS++Y+ + D VRM+ + ++K
Sbjct: 421 GACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK 480
Query: 568 SPGCSWIILKDKVHLFLA 585
PG SW+ + K H+F A
Sbjct: 481 LPGYSWVDVGYKTHVFGA 498
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 164/396 (41%), Gaps = 110/396 (27%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDS----VCSN------- 75
MP RN VS+ AMI+G + F EA + M P ++ S C++
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 76 ------ALISG--------------YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
AL G Y K G +A ++FE M KD V+W +M+DGY K
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G EA F KM ++ V +D ++ L
Sbjct: 121 GEFEEALLAFKKMIDEEVT-----IDQHV--------------------------LCSTL 149
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDA 234
ACG + G VH V + GF+ DI +GN++ MY + G M+ A+ VF + S+ R+
Sbjct: 150 GACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNV 209
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERM------PGK------------------------- 263
VS+ LI GYV +IE+ +F + P +
Sbjct: 210 VSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 269
Query: 264 ---------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
FVS + ++ + G LE++I+ F+ + + ++ W +++S F + ++
Sbjct: 270 VMKINFDEDPFVS-SILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKD 328
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
A + F M+ + V+PN +T S+L+ + + +G
Sbjct: 329 AIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 364
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 18/229 (7%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLKVGRCEEA--- 90
RN VSY +I G+V + ++V + + + ++LI E+
Sbjct: 207 RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQL 266
Query: 91 -ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
A++ + ++D +VD Y K G + +A + FD++ + +AW ++V + +
Sbjct: 267 HAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLG 326
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD--YDIILG- 206
+D +F M G+ N+IT L C G+ GL + D Y ++ G
Sbjct: 327 KDAIKIFERMVDRGVKPNAITFISLLTGCS-----HAGLVEEGLDYFYSMDKTYGVVPGE 381
Query: 207 ---NSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIE 251
+ +I + GR G + EA + + M + +A W S + +G+ E
Sbjct: 382 EHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 430
>gi|357478647|ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510664|gb|AES91806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 576
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/551 (35%), Positives = 304/551 (55%), Gaps = 54/551 (9%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVC-SNALISGYLK-VGRCEE--AAR 92
++ S+ +I F ++G F EA LYV M R +C S+ +S LK R E+
Sbjct: 68 DSFSWGCVIRFFSQKGQFVEAVSLYVQMR---RIGLCPSSHAVSSILKSCARVEDDLCGL 124
Query: 93 IFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
+ V K V +++D YCK G V+ AR++FD+MP+KNVV+W +++ GY+K
Sbjct: 125 LIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGG 184
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
++G F + I L D+I N
Sbjct: 185 NLDEGQRFF----------DEIPLK-----------------------------DVISWN 205
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS 267
+++ Y + G MD A +F M +R+ SWN++I+GYV G I EA LF+ MP ++ VS
Sbjct: 206 CMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMPRRNSVS 265
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD- 326
TMI G+S G++ + ELF+ M +KD +++ A+I+ + + + +EA F ML+ D
Sbjct: 266 LITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDS 325
Query: 327 -VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ P+++TL+SV+SA + L I + + + D + +L+ LY+KCG++ A
Sbjct: 326 SLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKA 385
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
Y +F + +R++V+Y++MI G NG +A+ LF +M E ++PN +T+ +L+A NH
Sbjct: 386 YELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHA 445
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GL EEG+ F SMK I P +HY MVD+LGRAG L EA LI M +P GVWGA
Sbjct: 446 GLAEEGYRCFISMKD-NGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMPMQPNVGVWGA 504
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LL A R H NL L ++A QH ++LE ++A Y +LS +Y+ +GK D ++ + K+I
Sbjct: 505 LLLACRLHDNLKLGEIAVQHCIKLESETAGYYSLLSGIYATVGKWNDAKKLTTGVEGKKI 564
Query: 566 RKSPGCSWIIL 576
K PGCSW L
Sbjct: 565 IKIPGCSWTQL 575
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 210/430 (48%), Gaps = 52/430 (12%)
Query: 14 TALINNNCSIYE---AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TAL++ C I + A ++F MP +N VS+ ++++G+++ G E + + +P +D
Sbjct: 143 TALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPL--KD 200
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
+ N ++SGY K G+ + A +F+ M E++ +W +M+ GY G ++EARE+FD MP
Sbjct: 201 VISWNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMPR 260
Query: 131 KNVVAWTAMVDGYMK-------------------------VDCF------EDGFDLFLSM 159
+N V+ M+ GY K + C+ ++ DLF M
Sbjct: 261 RNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVM 320
Query: 160 RR--GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
+ + + +TL + AC + + ++ FG D L ++I +Y + G
Sbjct: 321 LKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCG 380
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMIT 273
+D+A ++F + KRD V+++++I G NG +A LFERM G+ + V++T ++T
Sbjct: 381 SIDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILT 440
Query: 274 GFSSKGNLEKSIELFNMMPEK---DDVTWTAIISGFVNNEQY-EEAFRWFIEMLRKDVRP 329
++ G E+ F M + V I+ + + +EA++ ++M ++P
Sbjct: 441 AYNHAGLAEEGYRCFISMKDNGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKM---PMQP 497
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRI 388
N ++L A L G H +K +ES+ + SL+S +Y+ G DA ++
Sbjct: 498 NVGVWGALLLACRLHDNLKLGEIAVQHCIK--LESETAGYYSLLSGIYATVGKWNDAKKL 555
Query: 389 FTNIDERNIV 398
T ++ + I+
Sbjct: 556 TTGVEGKKII 565
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 135/297 (45%), Gaps = 22/297 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R AS+N MIT ++ SI EA E+F MP RN+VS MI G+ + G + A EL
Sbjct: 227 MPERNFASWNTMITGYVDCG-SIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSAREL 285
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV------VAWGSMVDGYCK 114
+ M +D + NA+I+ Y + + +EA +F M++ D + S++ +
Sbjct: 286 FDQMDD--KDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQ 343
Query: 115 KGRVIEAREIFDKMPEKNVV----AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
G + R I ++ +V TA++D Y K + ++LF +R+ + +
Sbjct: 344 LGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAYELFHGLRKR----DVVA 399
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ + CG R + V++ ++ +++ I+T Y G +E + F M
Sbjct: 400 YSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEEGYRCFISMK 459
Query: 231 KRDAV----SWNSLISGYVHNGEIEEAYRLFERMPGKDFVS-WTTMITGFSSKGNLE 282
V + ++ G ++EAY+L +MP + V W ++ NL+
Sbjct: 460 DNGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMPMQPNVGVWGALLLACRLHDNLK 516
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 11/223 (4%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
IT + + N SI + + D +W +I F Q+ EA +++M R + P+
Sbjct: 47 ITNYKTISNYILSI--LHHLRNPDSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSS 104
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+SS+L + A G IH HV K ++ V +Q +L+ LY K G+VV A ++F
Sbjct: 105 HAVSSILKSCARVEDDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDE 164
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ ++N+VS+NS++SG+ + G +E F DE + + I++ ++S G ++
Sbjct: 165 MPDKNVVSWNSLLSGYIKGGNLDEGQRFF----DEIPLKDVISWNCMVSGYAKAGKMDRA 220
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F+ M E + M+ GS+ EA +L ++M
Sbjct: 221 CYLFQQMP-----ERNFASWNTMITGYVDCGSIVEARELFDAM 258
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/632 (31%), Positives = 336/632 (53%), Gaps = 45/632 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRD-----SVCS 74
S+ + ++F M RN V++ +++TG+++ G+ + L+ M A W + SV S
Sbjct: 106 SVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLS 165
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
G + +G+ A I V S+++ Y K G V EAR +F +M +++V
Sbjct: 166 MVASQGMVDLGQHVHAQSIKFGCCST-VFVCNSLMNMYAKCGLVEEARVVFCRMETRDMV 224
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W ++ G + + LF R T + + C Q+H V
Sbjct: 225 SWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSV 284
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEA 253
+ GF + +++ Y + G +D+A VF +MS ++ VSW ++I G + NG+I A
Sbjct: 285 LKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLA 344
Query: 254 YRLFERMP----GKDFVSWTTMIT-------------------------------GFSSK 278
LF RM + ++++T++T +S
Sbjct: 345 AALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKL 404
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+ E+++ +F M+ +KD V+W+A+++ + A FI+M ++PN+ T+SS +
Sbjct: 405 CSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAI 464
Query: 339 SASAATAT-LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
A A+ A ++ G Q HA +K + + ++LVS+Y++ G++ +A +F +R++
Sbjct: 465 DACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDL 524
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
+S+NSM+SG+AQ+G ++AL++FR+M+ EG+ + +TFLSV+ C H GLVEEG YF
Sbjct: 525 LSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDL 584
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
M Y I P +HYACMVD+ RAG L E + LI M F P +W ALLGA R H N++
Sbjct: 585 MVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVE 644
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
L KLAA+ L+ LEP + YV+LS++YS GK ++ + VR K++RK GCSWI +K
Sbjct: 645 LGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIK 704
Query: 578 DKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+KVH F+A KS ++I L+ ++ K+
Sbjct: 705 NKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQ 736
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 187/387 (48%), Gaps = 54/387 (13%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D+ S+VD Y V++ R++F+ M ++NVV WT+++ GY++ D LF MR
Sbjct: 90 DIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMR 149
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G+ N T + + G VH +FG + + NS++ MY + G ++
Sbjct: 150 AEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVE 209
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMIT------- 273
EA VF M RD VSWN+L++G V NG EA +LF D S TM+T
Sbjct: 210 EARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFH-----DSRSSITMLTESTYSTV 264
Query: 274 -----------------------GFSSKGN--------------LEKSIELFNMMP-EKD 295
GF S GN L+K++++F +M ++
Sbjct: 265 INLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQN 324
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V+WTA+I G + N A F M V PN LT S++L+ S A+ QIHA
Sbjct: 325 VVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFP----PQIHA 380
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
V+K N E ++ +L+ YSK + +A IF ID++++VS+++M++ +AQ G
Sbjct: 381 QVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNG 440
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSAC 442
A N F KM GL PN+ T S + AC
Sbjct: 441 ATNAFIKMTMHGLKPNEFTISSAIDAC 467
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 147/308 (47%), Gaps = 19/308 (6%)
Query: 8 SYNAMITALI---NNNCSIYEAFEIFATMP-MRNAVSYAAMITGFVRRGMFYEAEELYVN 63
SY ++TAL+ N + +A ++F M +N VS+ AMI G ++ G A L+
Sbjct: 291 SYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSR 350
Query: 64 MPARWRDSVCSNALI-SGYLKVGRCEEAARIFEAMVEKD-----VVAWGSMVDGYCKKGR 117
M D V N L S L V +I +++ + V MV Y K
Sbjct: 351 MR---EDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYECTPTVGTALMVS-YSKLCS 406
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
EA IF + +K+VV+W+AM+ Y + + F+ M G+ N T++ +A
Sbjct: 407 TEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDA 466
Query: 178 CGRFFRYRE-GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
C + G Q H + + + + +++++MY R G ++ A VF + RD +S
Sbjct: 467 CASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLS 526
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP 292
WNS++SGY +G ++A +F +M + D +++ ++I G + G +E+ + F++M
Sbjct: 527 WNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMV 586
Query: 293 EKDDVTWT 300
+T T
Sbjct: 587 RDYGITPT 594
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 350 GSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G Q+HA V+ + D+ + SLV +Y +V+D ++F + +RN+V++ S+++G+
Sbjct: 74 GKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYI 133
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMK 459
Q G+ + ++LF +M+ EG+ PN TF SVLS G+V+ G ++ +S+K
Sbjct: 134 QAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIK 185
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 325/591 (54%), Gaps = 40/591 (6%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG------------- 116
D V L+S Y G +E R+F+ M +K+V W MV Y K G
Sbjct: 133 DEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMV 192
Query: 117 -------RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI 169
R A E+FDK+ +++V++W +M+ GY+ E G +++ M G+ +
Sbjct: 193 EKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLA 252
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T+ + C G VH L + F+ I N+++ MY + G +D A +VF M
Sbjct: 253 TIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSI 285
+R+ VSW S+I+GY +G + A RL ++M + D V+ T+++ + G+L+
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGK 372
Query: 286 ELFNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV----------RPNQ 331
++ + + E + A++ + + A F M+ KD+ +P+
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDS 432
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T++ +L A A+ + L +G +IH ++++ SD + N+LV LY KCG + A +F
Sbjct: 433 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
I +++VS+ MISG+ +G G EA+ F +M+D G+ P++++F+S+L AC+H GL+E+G
Sbjct: 493 IPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
+ +F MK +NIEP EHYACMVD+L R G+L++A + I ++ P +WGALL R
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCR 612
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
+ +++LA+ A+ + ELEP++ YV+L+++Y+ K + R+R K K +RK+PGC
Sbjct: 613 IYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGC 672
Query: 572 SWIILKDKVHLFLAGRKSCL-DLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
SWI +K KV+LF++G S K+IE L+ + + KE + PK ++L+
Sbjct: 673 SWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALI 723
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 204/422 (48%), Gaps = 34/422 (8%)
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
++ V + A + + ++ E+ +L ++ + T + + + C +G +
Sbjct: 63 DRQVTDYNAKILHFCQLGNLENAMELVCMCQKS--ELETKTYSSVLQLCAGSKSLTDGKK 120
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VH ++ D +LG ++++Y G + E +VF M K++ WN ++S Y G+
Sbjct: 121 VHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+E+ LF+ M K G K E + ELF+ + ++D ++W ++ISG+V+N
Sbjct: 181 FKESICLFKIMVEK----------GIEGK-RPESASELFDKLCDRDVISWNSMISGYVSN 229
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
E + +M+ + + T+ SVL A + TL+ G +H+ +K E ++
Sbjct: 230 GLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFS 289
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N+L+ +YSKCG++ A R+F + ERN+VS+ SMI+G+ ++G + A+ L ++M+ EG+
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVK 349
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
+ + S+L AC G ++ G +K N+E ++D+ + GS+ A
Sbjct: 350 LDVVATTSILHACARSGSLDNGKDVHDYIKA-NNMESNLFVCNALMDMYTKCGSMDGANS 408
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
+ ++M + W ++G EL+PDS T +L S+
Sbjct: 409 VFSTMVVKDIIS-WNTMIG-------------------ELKPDSRTMACILPACASLSAL 448
Query: 550 KR 551
+R
Sbjct: 449 ER 450
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 159/357 (44%), Gaps = 61/357 (17%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALI 78
A E+F + R+ +S+ +MI+G+V G+ E+Y M D SV
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
SG L +G+ + I ++ E+ + +++D Y K G + A +F+KM E+NVV+WT+
Sbjct: 264 SGTLSLGKAVHSLAI-KSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY + + L M + G+ + + T + AC R G VH +
Sbjct: 323 MIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANN 382
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG--------------- 243
+ ++ + N+++ MY + G MD AN VFS M +D +SWN++I
Sbjct: 383 MESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPAC 442
Query: 244 ----------------------------------YVHNGEIEEAYRLFERMPGKDFVSWT 269
YV G + A LF+ +P KD VSWT
Sbjct: 443 ASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502
Query: 270 TMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
MI+G+ G ++I FN M E D+V++ +I+ ++ E+ +R+F M
Sbjct: 503 VMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM 559
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/631 (31%), Positives = 321/631 (50%), Gaps = 45/631 (7%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
DR S + + S+ E E+F MP +N V++ +++TG M E L+
Sbjct: 131 DRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFF 190
Query: 63 NMPAR--WRDSVCSNALISGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKG 116
M A W + +++S G + R+ V+ V S+++ Y K G
Sbjct: 191 RMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG 250
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
V +A+ +F+ M +++V+W ++ G +C + LF R T + +
Sbjct: 251 LVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIK 310
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAV 235
C + Q+H V + GF + ++ Y + G + +A +FSM + R+ V
Sbjct: 311 LCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVV 370
Query: 236 SWNSLISGYVHNGEIEEAYRLFERM------PGK-------------------------- 263
SW ++ISG + NG+I A LF RM P +
Sbjct: 371 SWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTN 430
Query: 264 ----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
FV T ++ +S G+ E ++ +F M+ +KD V W+A++S E A F
Sbjct: 431 YQHIPFVG-TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLF 489
Query: 320 IEMLRKDVRPNQLTLSSVLSASAA-TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
+M + ++PN+ T+SSV+ A A +A ++QG Q HA +K + + ++LVS+YS+
Sbjct: 490 NKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSR 549
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
GN+ A +F +R++VS+NSMISG+AQ+G +A+ FR+M+ G+ + +TFL+V
Sbjct: 550 KGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAV 609
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
+ C H GLV EG YF SM + I P EHYACMVD+ RAG L E + LI M F
Sbjct: 610 IMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPA 669
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
VW LLGA R H N++L K +A L+ LEP ++ YV+LS++Y+ GK ++ + VR
Sbjct: 670 GAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRK 729
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
++++K GCSWI +K+KVH F+A KS
Sbjct: 730 LMDYRKVKKEAGCSWIQIKNKVHSFIAFDKS 760
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 213/460 (46%), Gaps = 56/460 (12%)
Query: 33 MPMRNA-VSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAA 91
+P R+A V ++ + RRGM E + + AR + +A +S LK R
Sbjct: 58 IPRRDAAVGANRVLFDYARRGMVLEVLDQFS--VARRGGVLVDSATLSCVLKACRSVPDR 115
Query: 92 RIFEAMV---------EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ E + +V A S+VD Y K G V E E+F+ MP+KNVV WT+++ G
Sbjct: 116 VLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTG 175
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ LF MR G+ N T + A G +VH +FG
Sbjct: 176 CAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSS 235
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE---- 258
+ + NS++ MY + G +++A VF+ M RD VSWN+L++G N EA +LF
Sbjct: 236 VFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRA 295
Query: 259 ---RMPGKDFVS--------------------------------WTTMITGFSSKGNLEK 283
+M + + T + +S G L
Sbjct: 296 TMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELAD 355
Query: 284 SIELFNMMP-EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
++ +F+M ++ V+WTAIISG + N A F M V PN+ T S++L AS
Sbjct: 356 ALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASL 415
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ QIHA V+K N + + +L++ YSK G+ DA IF I+++++V++++
Sbjct: 416 SILP----PQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSA 471
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
M+S AQ G E A LF KM +G+ PN+ T SV+ AC
Sbjct: 472 MLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDAC 511
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME-SDVSIQNSL 372
E F R V + TLS VL A + G Q+H VK + +VS SL
Sbjct: 82 EVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSL 141
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V +Y KCG+V + +F + ++N+V++ S+++G A + E + LF +M+ EG+ PN
Sbjct: 142 VDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNP 201
Query: 433 ITFLSVLSACNHVGLVEEG 451
TF SVLSA G ++ G
Sbjct: 202 FTFASVLSAVASQGALDLG 220
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/604 (32%), Positives = 310/604 (51%), Gaps = 72/604 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------SV 72
+ +A +FA MP R+AVS+ M+ G R G F EA + ++M A S
Sbjct: 8 LADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSS 67
Query: 73 CS---------------------------NALISGYLKVGRCEEAARIFEAMVEKDVVAW 105
C+ N++++ Y K G E A +FE M + V +W
Sbjct: 68 CAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSW 127
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGM 164
+MV GR+ A +F+ MP++++V+W AM+ GY + LF M M
Sbjct: 128 NAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSM 187
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
A + T+T + AC R G QVH + R Y NS +T
Sbjct: 188 APDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY-----NSQVT------------- 229
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF--VSWTTMITGFSSKGNLE 282
N+LIS Y +G +E A R+ ++ D +S+T ++ G+ G++E
Sbjct: 230 -------------NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 276
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+ E+F +M +D V WTA+I G+ N + +EA F M+ PN TL++VLS A
Sbjct: 277 SAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA 336
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN-IVSYN 401
+ A L+ G QIH ++ +E S+ N+++++Y++ G+ A R+F + R +++
Sbjct: 337 SLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWT 396
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
SMI AQ+G GEEA+ LF +M G+ P++IT++ VLSAC+H G V EG Y+ +K
Sbjct: 397 SMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNE 456
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
+ I P HYACMVD+L RAG +EA + I M EP WG+LL A R H N +LA+L
Sbjct: 457 HQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAEL 516
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA+ L+ ++P+++ Y ++++YS G+ D R+ +K K +RK G SW ++ K+H
Sbjct: 517 AAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIH 576
Query: 582 LFLA 585
+F A
Sbjct: 577 VFGA 580
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 216/466 (46%), Gaps = 68/466 (14%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
+ K GR+ +AR +F +MPE++ V+WT MV G + F + L M G TL
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
T + +C G +VH V + G + + NS++ MYG+ G + A VF M
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
R SWN+++S H G ++ A LFE MP + VSW MI G++ G K+++LF+ M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ + P++ T++SVLSA A + G
Sbjct: 182 LHESSMA------------------------------PDEFTITSVLSACANLGNVRIGK 211
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI----------------------- 388
Q+HA++++ M + + N+L+S Y+K G+V +A RI
Sbjct: 212 QVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVK 271
Query: 389 ----------FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
F ++ R++V++ +MI G+ QNG +EA++LFR M G PN T +V
Sbjct: 272 IGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAV 331
Query: 439 LSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
LS C + ++ G I+ +++++L +E ++ + R+GS A + + + +
Sbjct: 332 LSVCASLACLDYGKQIHCRAIRSL--LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWR 389
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
W +++ A H + A + ++ +EPD T VLS
Sbjct: 390 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLS 435
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 210/457 (45%), Gaps = 75/457 (16%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
M R+ +S+NAM++ +N + + E +F +MP R+ VS+ AMI G+ + G+ +A +
Sbjct: 119 MPVRSVSSWNAMVS--LNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 176
Query: 60 LYVNM-------PARWR-------------------------------DSVCSNALISGY 81
L+ M P + +S +NALIS Y
Sbjct: 177 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 236
Query: 82 LKVGRCEEAARIFEAMVEKD--VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
K G E A RI + +E D V+++ ++++GY K G + ARE+F M ++VVAWTAM
Sbjct: 237 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAM 296
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ GY + ++ DLF SM G NS TL + C G Q+H R
Sbjct: 297 IVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLL 356
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ + N+IITMY R G A ++F + +++ ++W S+I +G+ EEA LFE
Sbjct: 357 EQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFE 416
Query: 259 RM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNN 309
M D +++ +++ S G + + ++ + + + + ++
Sbjct: 417 EMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARA 476
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH--AHVVKMNMESDVS 367
+ EA + FI R V P+ + S+LSA ++H A + ++ E +S
Sbjct: 477 GLFSEA-QEFIR--RMPVEPDAIAWGSLLSA----------CRVHKNAELAELAAEKLLS 523
Query: 368 IQ-------NSLVSLYSKCGNVVDAYRIFTNIDERNI 397
I +++ ++YS CG DA RI+ E+ +
Sbjct: 524 IDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 560
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+++K G + DA +F + ER+ VS+ M+ G + G EA+ M +G P Q T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 435 FLSVLSAC--NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
+VLS+C G V F L + P ++++ G+ G A +
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANS---VLNMYGKCGDSETATTVFE 117
Query: 493 SMTFEPPPGVWGALLGAGRTHLN-LDLAKLAAQHLMELEPD 532
M W A++ THL +DL A+ L E PD
Sbjct: 118 RMPVRSVSS-WNAMVSLN-THLGRMDL----AESLFESMPD 152
>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/549 (34%), Positives = 304/549 (55%), Gaps = 43/549 (7%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N + Y ++G ++ R+FE +++K++++W + + + G + AR++FD+MP+++VV
Sbjct: 76 NRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVV 135
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W M+ GY+ F+D F F M++ G+ + T + L R G Q+H +
Sbjct: 136 SWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSACR---GKQIHASM 192
Query: 195 SRFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI-----SGYVHNG 248
R G D ++++GNS+I MYG+ G +D A VF M + D SWNSLI SGY +
Sbjct: 193 IRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDITSWNSLIWSCGKSGYQNLA 252
Query: 249 ------------------------------EIEEAYRLFERMPGKDFVSWTTM----ITG 274
++E+ ++F F+S + + I
Sbjct: 253 LRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDL 312
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
FS LE S+ +F + + D V A+IS + + E A + F+ LR+++RP + TL
Sbjct: 313 FSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTL 372
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S VLSA + ++QGSQIH+ VVK +ESDV + +SLV +Y+K G + A + F I
Sbjct: 373 SIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGA 432
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
R+++S+N+MI G A NG +AL +F+++ G P++IT VL ACN GLV+EG
Sbjct: 433 RDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSI 492
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F SM+ Y + P EHYAC+VD++ R G L EA+D++ M EP +WG+LL A +
Sbjct: 493 FSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYG 552
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+L + A+ +MELEP S+ PY+VL+ Y + G+ RVR K K +RK GCSWI
Sbjct: 553 DLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVRRAMKEKGVRKVIGCSWI 612
Query: 575 ILKDKVHLF 583
+K+ V +F
Sbjct: 613 GIKNHVFVF 621
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 152/297 (51%), Gaps = 35/297 (11%)
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
FL G +A + + L E C VH + + GF+ LGN + +Y +
Sbjct: 25 FLKKAHGPLATSLSYYSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQ 84
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGF 275
LG +++ +VF + ++ +SWN + +V GE+E A +F+ MP +D VSW TMI+G+
Sbjct: 85 LGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGY 144
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
S G +++AFR+F EM + +RP+ T S
Sbjct: 145 VSFG-------------------------------LFDDAFRFFSEMQKAGIRPSGFTYS 173
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
++LS ++ +G QIHA +++ ++ S+V + NSL+ +Y K G V A+ +F ++E
Sbjct: 174 TLLSFVSSAC---RGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEE 230
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+I S+NS+I ++G AL F M+ G P+Q T +V++ C+++ +E+G
Sbjct: 231 LDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKG 287
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 208/489 (42%), Gaps = 77/489 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+ D+ S+N + A + + A ++F MP R+ VS+ MI+G+V G+F +A
Sbjct: 98 IIDKNLISWNIFLKAFVRFG-ELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRF 156
Query: 61 YVNM-PARWRDSVCSNALISGYLKV---GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
+ M A R S + + + ++ G+ A+ I + +VV S++ Y K G
Sbjct: 157 FSEMQKAGIRPSGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFG 216
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
V A +F M E ++ +W +++ K F+ MR G + + T++ +
Sbjct: 217 VVDYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVIT 276
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
C +G Q+ L R GF + I+ ++ I ++ + ++++ +VF + + D+V
Sbjct: 277 VCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVL 336
Query: 237 WNSLISGYVHNGEIEEAYRLF-----ERMPGKDF-------------------------- 265
N++IS Y +G E A +LF E + +F
Sbjct: 337 CNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVV 396
Query: 266 --------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
+ ++++ ++ G ++ +++ F + +D ++W +I G N + +A
Sbjct: 397 KSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALE 456
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F E+L P+++TL+ VL A +++G I + +ME +
Sbjct: 457 IFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFS-----SMEKE------------ 499
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
Y + I+ Y ++ ++ G +EA+++ M E P+ + + S
Sbjct: 500 --------YGVIPAIEH-----YACIVDMMSRGGKLKEAMDIVELMPHE---PSGLIWGS 543
Query: 438 VLSACNHVG 446
+L AC G
Sbjct: 544 LLCACEIYG 552
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 90/230 (39%), Gaps = 36/230 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D + +++L+ Y K G + A + F + +D+++W +M+ G GRV +A EIF +
Sbjct: 403 DVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKE-- 460
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ GG + ITL + AC EG+
Sbjct: 461 -----------------------------LLIGGPPPDEITLAGVLLACNVGGLVDEGLS 491
Query: 190 VHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR-DAVSWNSLISGYVHN 247
+ + + +G I I+ M R G + EA + +M + W SL+
Sbjct: 492 IFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIY 551
Query: 248 GEIEEAYRLFER---MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
G++ R+ ER + + + + + + +G E + + M EK
Sbjct: 552 GDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVRRAMKEK 601
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/613 (30%), Positives = 326/613 (53%), Gaps = 57/613 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP RN +S+ ++I+G+ + G + +A EL+ + AR + +G L
Sbjct: 102 ARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELF--LEARDDNLKLDKFTYAGALGFC 159
Query: 86 --RCE-EAARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
RC+ + ++ +V + V ++D Y K G++ +A +FD+ E++ V+W
Sbjct: 160 GERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWN 219
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR---YREGVQVHGLV 194
+++ GY++V E+ +L M R G+ + L + +AC +G+ +H
Sbjct: 220 SLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYA 279
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI---- 250
++ G ++DI++ +++ MY + G + EA K+FS+M ++ V++N++ISG++ +I
Sbjct: 280 AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEA 339
Query: 251 -EEAYRLFERMPGK---------------------------------------DFVSWTT 270
EA++LF M + D +
Sbjct: 340 SSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 399
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I ++ G+ E ++ F ++D +WT+II V NEQ E AF F ++ +RP
Sbjct: 400 LIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPE 459
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ T+S ++SA A A L+ G QI + +K +++ S++ S +S+Y+K GN+ A ++F
Sbjct: 460 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFI 519
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ ++ +Y++MIS AQ+G +ALN+F MK G+ PNQ FL VL AC H GLV
Sbjct: 520 EVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTH 579
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G YF++MK Y I P +H+ C+ D+LGR G L++A +LI S F+ P +W ALL +
Sbjct: 580 GVNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDHPVMWRALLSSC 639
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R + + + K A+ LMELEP+++ YV+L ++Y+ G VR + + ++K P
Sbjct: 640 RVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPA 699
Query: 571 CSWIILKDKVHLF 583
SWI+L ++ H F
Sbjct: 700 LSWIVLGNQTHSF 712
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 220/460 (47%), Gaps = 77/460 (16%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
YCK + AR++FD+MPE+N++++ +++ GY +V +E +LFL R + + T
Sbjct: 93 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTY 152
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
CG G +HGLV G + L N +I MY + G +D+A +F ++
Sbjct: 153 AGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNE 212
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGK---------------------------- 263
RD VSWNSLISGYV G EE L +M
Sbjct: 213 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKG 272
Query: 264 --------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF--- 306
D V T ++ ++ G+L+++I+LF++MP K+ VT+ A+ISGF
Sbjct: 273 MAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQM 332
Query: 307 --VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
+ +E EAF+ F+EM R+ + P+ T S VL A +A TL G QIHA + K N +S
Sbjct: 333 DDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS 392
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D I ++L+ LY+ G+ D + F + +++I S+ S+I QN E A +LFR++
Sbjct: 393 DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLF 452
Query: 425 DEGLVPNQITFLSVLSACNHVG-----------LVEEGFIYFKSMKT------------- 460
+ P + T ++SAC ++ G + S+KT
Sbjct: 453 SSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMP 512
Query: 461 LYN---IE---PGPEHYACMVDILGRAGSLAEAIDLINSM 494
L N IE P Y+ M+ L + GS +A+++ SM
Sbjct: 513 LANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESM 552
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 47/287 (16%)
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-------------- 257
MY + + A ++F M +R+ +S+NSLISGY G E+A LF
Sbjct: 92 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFT 151
Query: 258 ---------ERMP----------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
ER + +I +S G L++++ LF+
Sbjct: 152 YAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCN 211
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT---ATLNQ 349
E+D V+W ++ISG+V EE +M R ++ L SVL A + +
Sbjct: 212 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEK 271
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G IH + K+ ME D+ ++ +L+ +Y+K G++ +A ++F+ + +N+V+YN+MISGF Q
Sbjct: 272 GMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQ 331
Query: 410 -----NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ EA LF +M+ GL P+ TF VL AC+ +E G
Sbjct: 332 MDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYG 378
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 14/264 (5%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFY-----EAEELYVNMP 65
TAL++ N S+ EA ++F+ MP +N V+Y AMI+GF++ EA +L++ M
Sbjct: 292 TALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQ 351
Query: 66 AR-WRDSVCSNALISGYLKVGRCEEAARIFEAMV-----EKDVVAWGSMVDGYCKKGRVI 119
R S + +++ + E R A++ + D ++++ Y G
Sbjct: 352 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTE 411
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+ + F ++++ +WT+++D +++ + E FDLF + + T++++ AC
Sbjct: 412 DGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACA 471
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F G Q+ G + G D + S I+MY + G M ANKVF + D ++++
Sbjct: 472 DFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSA 531
Query: 240 LISGYVHNGEIEEAYRLFERMPGK 263
+IS +G +A +FE M +
Sbjct: 532 MISSLAQHGSAHDALNIFESMKTR 555
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 25/199 (12%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+ +A + +L G H H+VK ++ + + N+L+++Y KC + A ++F + ERN
Sbjct: 54 LFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 113
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH-----VGLVEEG 451
I+S+NS+ISG+ Q G E+A+ LF + +D+ L ++ T+ L C G + G
Sbjct: 114 IISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKLLHG 173
Query: 452 FIYFKSMKT---LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL- 507
+ + L N+ ++D+ + G L +A+ L + E W +L+
Sbjct: 174 LVVVNGLSQQVFLINV---------LIDMYSKCGKLDQAMSLFDRCN-ERDQVSWNSLIS 223
Query: 508 -----GAGRTHLNLDLAKL 521
GA LNL LAK+
Sbjct: 224 GYVRVGAAEEPLNL-LAKM 241
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 303/563 (53%), Gaps = 34/563 (6%)
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
E A+I + + D+ ++ + ++ A +F+++ + NV + ++ +++
Sbjct: 41 EVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNS 100
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
F F M++ G+ ++ T L +AC +H V ++GF D+ + N
Sbjct: 101 QSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPN 160
Query: 208 SIITMYGRLG----------FMD-----------------------EANKVFSMMSKRDA 234
S+I Y + G FM+ A K+F M++RDA
Sbjct: 161 SLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDA 220
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
VSWN+++ GYV GE+ +A+ LFE+MP ++ VSW+TM++G+ G++E + LF+ MP K
Sbjct: 221 VSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFK 280
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
+ VTWT IISGF +EA + +M ++P+ TL S+L+A A + L G ++H
Sbjct: 281 NLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVH 340
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
A + K+ ++ V++ N+LV +Y+KCG V A IF + R++VS+N M+ G A +G GE
Sbjct: 341 ASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGE 400
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
+A+ LF KM+ EG P+++T +++L AC H G V++G YF SM+ + I P EHY CM
Sbjct: 401 KAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCM 460
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
+D+LGR G L EA L+ SM EP +WG LLGA R H + LA+ L+ LE
Sbjct: 461 IDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDP 520
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLK 594
Y +LS++++ G +R++ K ++K G S I L D+VH F KS +
Sbjct: 521 GNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETD 580
Query: 595 EIEVTLQTISKGTKEFDW-PKHD 616
+I L + + K+ + P+ D
Sbjct: 581 KIYQILVKLGQDLKQVAYAPEAD 603
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 183/365 (50%), Gaps = 15/365 (4%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F M ++ VS+ +MI G V+ G A +L+ M R D+V N ++ GY+K G
Sbjct: 177 AMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAER--DAVSWNTILDGYVKAG 234
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
+A +FE M E++VV+W +MV GYCK G + AR +FDKMP KN+V WT ++ G+ +
Sbjct: 235 EMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAE 294
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
++ L+ M G+ + TL + AC G +VH + + + +
Sbjct: 295 KGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNV 354
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
N+++ MY + G +D+A +F+ MS RD VSWN ++ G +G E+A +LF +M + F
Sbjct: 355 SNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGF 414
Query: 266 ----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAF 316
V+ ++ + G +++ + FN M + + +I + EEAF
Sbjct: 415 KPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAF 474
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
R M + PN + ++L A + ++ ++ + +SD + L +++
Sbjct: 475 RLVQSM---PMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLE-QSDPGNYSMLSNIF 530
Query: 377 SKCGN 381
+ G+
Sbjct: 531 AAAGD 535
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 46/302 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
MA+R + S+N ++ + + +AF +F MP RN VS++ M++G+ + G A L
Sbjct: 215 MAERDAVSWNTILDGYVKAG-EMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARML 273
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM-------------------VEKD 101
+ MP +++ V +ISG+ + G +EA ++ M E
Sbjct: 274 FDKMP--FKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESG 331
Query: 102 VVAWG--------------------SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
++ G ++VD Y K GRV +A IF++M +++V+W M+
Sbjct: 332 LLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQ 391
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR-FGFD 200
G E LF M++ G + +TL + AC +G+ + R G
Sbjct: 392 GLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIV 451
Query: 201 YDIILGNSIITMYGRLGFMDEANK-VFSMMSKRDAVSWNSLISG-YVHNGEIEEAYRLFE 258
I +I + GR G ++EA + V SM + + V W +L+ VHN + A ++ +
Sbjct: 452 PHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNA-VPLAEKVLD 510
Query: 259 RM 260
R+
Sbjct: 511 RL 512
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
N ++HA ++K N+ +D+ + L+S +S C + A +F I + N+ YN++I
Sbjct: 36 FNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRA 95
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
QN +A F M+ GL + T+ +L ACN G
Sbjct: 96 HVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKG 135
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 201/651 (30%), Positives = 322/651 (49%), Gaps = 77/651 (11%)
Query: 19 NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-------------- 64
NN +A + +P N S++ +I F + F+ A + M
Sbjct: 60 NNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPS 119
Query: 65 ------------PARW-----------RDSVCSNALISGYLKVGRCEEAARIFEAMVEKD 101
PAR DS ++L+ Y+K + +A R+F+ M E D
Sbjct: 120 AVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPD 179
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMP----EKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
VV+W ++V Y ++G V EA+ +F +M + N+++W M+ G+ + + +FL
Sbjct: 180 VVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFL 239
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
M G + T++ + A G G+ +HG V + G D + +++I MYG+
Sbjct: 240 DMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCS 299
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSS 277
E ++VF M D S N+ I G S
Sbjct: 300 CTSEMSQVFDQMDHMDVGSCNAF-------------------------------IFGLSR 328
Query: 278 KGNLEKSIELFNMMPEK----DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
G +E S+ LF + ++ + V+WT++I+ N + EA F EM V+PN +T
Sbjct: 329 NGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVT 388
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ +L A A L G H ++ + +DV + ++L+ +Y+KCG + + F I
Sbjct: 389 IPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIP 448
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+N+V +N++I+G+A +G +EA+ +F M+ G P+ I+F VLSAC+ GL EEG
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSY 508
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
YF SM + Y IE EHYACMV +L RAG L +A +I M P VWGALL + R H
Sbjct: 509 YFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVH 568
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N+ L ++AA+ L ELEP + Y++LS++Y+ G + NRVR K K +RK+PGCSW
Sbjct: 569 NNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSW 628
Query: 574 IILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLE 623
I +K+KVH+ LAG KS + +I L +S K+ + P+ ++ L +E
Sbjct: 629 IEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVE 679
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 192/415 (46%), Gaps = 37/415 (8%)
Query: 75 NALISGYLKVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N L S + + +A A I + + D ++ Y +A + D +PE NV
Sbjct: 20 NCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNV 79
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+++ ++ + K F F M G+ ++ L +AC + QVHG+
Sbjct: 80 FSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI 139
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
S GFD D + +S++ MY + + +A++VF M + D VSW++L++ Y G ++EA
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199
Query: 254 YRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
RLF M + +SW MI GF+ G
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSG------------------------------ 229
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
Y EA F++M + P+ T+SSVL A L G IH +V+K + SD +
Sbjct: 230 -LYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVS 288
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
++L+ +Y KC + ++F +D ++ S N+ I G ++NG E +L LFR++KD+G+
Sbjct: 289 SALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGME 348
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
N +++ S+++ C+ G E F+ M+ + ++P C++ G +L
Sbjct: 349 LNVVSWTSMIACCSQNGRDMEALELFREMQ-IAGVKPNSVTIPCLLPACGNIAAL 402
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/603 (32%), Positives = 326/603 (54%), Gaps = 28/603 (4%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
++ +A ++F M RN V++ +M+ + + GM EA ++ M R + + +SG+
Sbjct: 205 AVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREM--RLQGVEVTLVALSGF 262
Query: 82 LKVGRCEEAARIFEAM----------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
C + + E +E D V S+++ Y K G + EA +F M K
Sbjct: 263 FTA--CANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVK 320
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+VV W +V GY + E ++ MR G+ F+ +TL+ L G++ H
Sbjct: 321 DVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAH 380
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ F+ D+++ + II MY + G MD A +VFS + K+D V WN++++ G
Sbjct: 381 AYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSG 440
Query: 252 EAYRLF-----ERMPGKDFVSWTTMITGFSSKGNLEKSIELF------NMMPEKDDVTWT 300
EA +LF E +P + VSW ++I GF G + ++ +F +MP + +TWT
Sbjct: 441 EALKLFFQMQLESVP-PNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMP--NLITWT 497
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
++SG V N A F EM +RPN ++++S LS + A L G IH +V++
Sbjct: 498 TMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRR 557
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
++ + I S++ +Y+KCG++ A +F + + YN+MIS +A +G EAL LF
Sbjct: 558 DLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREALVLF 617
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
++M+ EG+VP+ IT SVLSAC+H GL++EG FK M + ++P EHY C+V +L
Sbjct: 618 KQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLAN 677
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
G L EA+ I +M P + G+LL A + +++LA A+ L++L+PD++ YV L
Sbjct: 678 DGQLDEALRTILTMPSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNYVAL 737
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S++Y+ +GK + +R K K +RK PGCSWI + ++H+F+A +S +EI VTL
Sbjct: 738 SNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFIASDRSHPKTEEIYVTL 797
Query: 601 QTI 603
+
Sbjct: 798 DLL 800
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 189/387 (48%), Gaps = 40/387 (10%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G A +F P NV +W A++ + + E+ ++ M++ G+ ++ L
Sbjct: 98 YAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVL 157
Query: 172 TILFEACGRFFRYREGVQVHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ +ACG R G VH V + G + + S++ MYG+ G +++A KVF MS
Sbjct: 158 PNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMS 217
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK------------ 278
+R+ V+WNS++ Y NG +EA R+F M + ++GF +
Sbjct: 218 ERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQ 277
Query: 279 ---------------------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
G +E++ +F M KD VTW +++G+
Sbjct: 278 GHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGM 337
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
E+A M + +R + +TLS++L+ +A T L G + HA+ VK + E DV + +
Sbjct: 338 VEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSG 397
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
++ +Y+KCG + A R+F+ + +++IV +N+M++ A+ GL EAL LF +M+ E + PN
Sbjct: 398 IIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPN 457
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSM 458
+++ S++ G V E F M
Sbjct: 458 VVSWNSLIFGFFKNGQVAEARNMFAEM 484
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 9/223 (4%)
Query: 237 WNSLISGYVHNGEIEEAYRL----FERMPG---KDFVSWTTMITGFSSKGNLEKSIELFN 289
+ +L+ G V+ + A +L +R P DFV + ++ ++ G E + LF
Sbjct: 54 YGTLLQGCVYERALPLALQLHADVIKRGPTFALNDFV-ISKLVILYAKCGASEPATRLFR 112
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
P + +W AII EEA +I+M + + P+ L +VL A +
Sbjct: 113 DSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRF 172
Query: 350 GSQIHAHVVK-MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G +HA VVK + ++ V + SLV +Y KCG V DA ++F + ERN V++NSM+ +A
Sbjct: 173 GKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYA 232
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
QNG+ +EA+ +FR+M+ +G+ + +AC + V EG
Sbjct: 233 QNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEG 275
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 4/195 (2%)
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
S + + EA +M ++ ++L L Q+HA V+K
Sbjct: 24 SSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPT 83
Query: 364 SDVS--IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
++ + + LV LY+KCG A R+F + N+ S+ ++I + G EEAL +
Sbjct: 84 FALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYI 143
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KM+ +GL P+ +VL AC + V G ++ +KT+ ++ +VD+ G+
Sbjct: 144 KMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTI-GLKECVYVATSLVDMYGK 202
Query: 481 AGSLAEAIDLINSMT 495
G++ +A + + M+
Sbjct: 203 CGAVEDAGKVFDEMS 217
>gi|356551872|ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Glycine max]
Length = 945
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 201/671 (29%), Positives = 342/671 (50%), Gaps = 88/671 (13%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------------------PA 66
EA ++F M RN +++AMI R + E EL+ +M
Sbjct: 136 EARKVFDEMRERNLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVLPDDFLLPKVLKACG 195
Query: 67 RWRD--------------SVCS-----NALISGYLKVGRCEEAARIFEAMVEKDVVAWGS 107
++RD +CS N++++ Y K G A +IF M E++ V+W
Sbjct: 196 KFRDIETGRLIHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKIFRRMDERNCVSWNV 255
Query: 108 MVDGYCKKGRVIEAREIFDKMPEK------------------------------------ 131
++ GYC++G + +A++ FD M E+
Sbjct: 256 IITGYCQRGEIEQAQKYFDAMQEEGMEPGLVTWNILIASYSQLGHCDIAMDLMRKMESFG 315
Query: 132 ---NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+V WT+M+ G+ + + FDL M G+ NSIT+ AC G
Sbjct: 316 ITPDVYTWTSMISGFTQKGRINEAFDLLRDMLIVGVEPNSITIASAASACASVKSLSMGS 375
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++H + + DI++GNS+I MY + G ++ A +F +M +RD SWNS+I GY G
Sbjct: 376 EIHSIAVKTSMVDDILIGNSLIDMYAKGGDLEAAQSIFDVMLERDVYSWNSIIGGYCQAG 435
Query: 249 EIEEAYRLFERMPGKD----FVSWTTMITGFSSKGNLEKSIELFNMMPEKDD------VT 298
+A+ LF +M D V+W MITGF G+ ++++ LF + EKD +
Sbjct: 436 FCGKAHELFMKMQESDSPPNVVTWNVMITGFMQNGDEDEALNLF-LRIEKDGKIKPNVAS 494
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W ++ISGF+ N Q ++A + F +M ++ PN +T+ ++L A + +IH
Sbjct: 495 WNSLISGFLQNRQKDKALQIFRQMQFSNMAPNLVTVLTILPACTNLVAAKKVKEIHCCAT 554
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ N+ S++S+ N+ + Y+K GN++ + ++F + ++I+S+NS++SG+ +G E AL+
Sbjct: 555 RRNLVSELSVSNTFIDSYAKSGNIMYSRKVFDGLSPKDIISWNSLLSGYVLHGCSESALD 614
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M+ +GL P+++T S++SA +H +V+EG F ++ Y I EHY+ MV +L
Sbjct: 615 LFDQMRKDGLHPSRVTLTSIISAYSHAEMVDEGKHAFSNISEEYQIRLDLEHYSAMVYLL 674
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR+G LA+A++ I +M EP VW ALL A R H N +A A +H++EL+P++
Sbjct: 675 GRSGKLAKALEFIQNMPVEPNSSVWAALLTACRIHKNFGMAIFAGEHMLELDPENIITQH 734
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLD-LKEIE 597
+LS YSV GK + ++ +K K ++ G SWI + + VH F+ G + L +I
Sbjct: 735 LLSQAYSVCGKSWEAQKMTKLEKEKFVKMPVGQSWIEMNNMVHTFVVGDDQSIPYLDKIH 794
Query: 598 VTLQTISKGTK 608
L+ + + K
Sbjct: 795 SWLKRVGENVK 805
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 216/401 (53%), Gaps = 16/401 (3%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+V Y K G + EAR++FD+M E+N+ W+AM+ + +E+ +LF M + G+ +
Sbjct: 124 LVSMYAKCGHLDEARKVFDEMRERNLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVLPD 183
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
L + +ACG+F G +H LV R G + + NSI+ +Y + G M A K+F
Sbjct: 184 DFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKIFR 243
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSWTTMITGFSSKG-- 279
M +R+ VSWN +I+GY GEIE+A + F+ M PG V+W +I +S G
Sbjct: 244 RMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEPG--LVTWNILIASYSQLGHC 301
Query: 280 ----NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+L + +E F + P D TWT++ISGF + EAF +ML V PN +T++
Sbjct: 302 DIAMDLMRKMESFGITP--DVYTWTSMISGFTQKGRINEAFDLLRDMLIVGVEPNSITIA 359
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S SA A+ +L+ GS+IH+ VK +M D+ I NSL+ +Y+K G++ A IF + ER
Sbjct: 360 SAASACASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYAKGGDLEAAQSIFDVMLER 419
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
++ S+NS+I G+ Q G +A LF KM++ PN +T+ +++ G +E F
Sbjct: 420 DVYSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITGFMQNGDEDEALNLF 479
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
++ I+P + ++ + +A+ + M F
Sbjct: 480 LRIEKDGKIKPNVASWNSLISGFLQNRQKDKALQIFRQMQF 520
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 128/226 (56%), Gaps = 1/226 (0%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T +++ ++ G+L+++ ++F+ M E++ TW+A+I + ++EE F +M++ V
Sbjct: 122 TKLVSMYAKCGHLDEARKVFDEMRERNLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVL 181
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P+ L VL A + G IH+ V++ M S + + NS++++Y+KCG + A +I
Sbjct: 182 PDDFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKI 241
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F +DERN VS+N +I+G+ Q G E+A F M++EG+ P +T+ ++++ + +G
Sbjct: 242 FRRMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEPGLVTWNILIASYSQLGHC 301
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ + M++ + I P + M+ + G + EA DL+ M
Sbjct: 302 DIAMDLMRKMES-FGITPDVYTWTSMISGFTQKGRINEAFDLLRDM 346
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
VRP +T ++L A + G ++H + + + + ++ LVS+Y+KCG++ +A
Sbjct: 82 VRP--ITFMNLLQACIDKDCILVGRELHTRI-GLVRKVNPFVETKLVSMYAKCGHLDEAR 138
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
++F + ERN+ ++++MI +++ EE + LF M G++P+ VL AC
Sbjct: 139 KVFDEMRERNLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVLPDDFLLPKVLKACGKFR 198
Query: 447 LVEEG 451
+E G
Sbjct: 199 DIETG 203
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 287/523 (54%), Gaps = 39/523 (7%)
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EA +F + V+AW +++ + F F+ MR G + + ++C
Sbjct: 57 EALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCT 116
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
R G VHG + R G D D+ GN+++ MY +L +D KVF +M ++D VS+N+
Sbjct: 117 MMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNT 176
Query: 240 LISGYVHNGEIEEAYRLFERMPGKD--------------FVSWTTMITG----------- 274
+I+GY +G E+A R+ M D F + ++ G
Sbjct: 177 VIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKG 236
Query: 275 --------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
++ +E S +F+ + +D ++W ++++G+V N +Y EA R F
Sbjct: 237 IDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFR 296
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+M+ VRP + SSV+ A A ATL+ G Q+H +V++ ++ I ++LV +YSKCG
Sbjct: 297 QMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCG 356
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
N+ A +IF ++ + VS+ ++I G A +G G EA++LF +MK +G+ PNQ+ F++VL+
Sbjct: 357 NIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLT 416
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC+HVGLV+E + YF SM +Y + EHYA + D+LGRAG L EA D I+ M EP
Sbjct: 417 ACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTG 476
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
VW LL + H NL+LA+ A+ + ++ ++ YV++ ++Y+ G+ ++ ++R++
Sbjct: 477 SVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRV 536
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ K +RK P CSWI +K+K H F++G +S + I L+ +
Sbjct: 537 RKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAV 579
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/538 (23%), Positives = 223/538 (41%), Gaps = 148/538 (27%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
TSAS ++ ++ N ++EA +F T+ +++ ++I F + +F A +V
Sbjct: 39 HTSAS---IVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVE 95
Query: 64 MPARWR-------------------------------------DSVCSNALISGYLKVGR 86
M A R D NAL++ Y K+
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLG 155
Query: 87 CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV 146
+ ++FE M KDVV++ +++ GY + G
Sbjct: 156 IDSVRKVFELMPRKDVVSYNTVIAGYAQSG------------------------------ 185
Query: 147 DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
+ED + M + ++ TL+ + + +G ++HG V R G D D+ +G
Sbjct: 186 -MYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIG 244
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----- 261
+S++ MY + ++++ +VFS + +RD++SWNSL++GYV NG EA RLF +M
Sbjct: 245 SSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVR 304
Query: 262 ----------------------------------GKDFVSWTTMITGFSSKGNLEKSIEL 287
G++ + ++ +S GN++ + ++
Sbjct: 305 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKI 364
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT- 346
F+ M D+V+WTAII G + EA F EM R+ V+PNQ+ +VL+A +
Sbjct: 365 FDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 424
Query: 347 ---------------LNQGSQIHAHVV-----------------KMNMESDVSIQNSLVS 374
LNQ + +A V KM +E S+ ++L+S
Sbjct: 425 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLS 484
Query: 375 LYSKCGNV----VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
S N+ A +IFT ID N+ +Y M + +A NG +E L +++ +GL
Sbjct: 485 SCSVHKNLELAEKVAEKIFT-IDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGL 541
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 99/191 (51%)
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
+ ++ + F R S + +I+ +++ L +++ +F + + W ++I F +
Sbjct: 23 QAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTD 82
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
+ A F+EM P+ SVL + L G +H +V++ M+ D+
Sbjct: 83 QSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
N+L+++YSK + ++F + +++VSYN++I+G+AQ+G+ E+AL + R+M L
Sbjct: 143 GNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDL 202
Query: 429 VPNQITFLSVL 439
P+ T SVL
Sbjct: 203 KPDAFTLSSVL 213
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 337/627 (53%), Gaps = 53/627 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A E+F M R+ V + M+ G+V+ G A L+ M A D + A ++ +L V
Sbjct: 201 AREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDP--NFATLACFLSV- 257
Query: 86 RCEEAARIFEAM----------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
C A + + +E +V ++V Y K + EA +F MP ++V
Sbjct: 258 -CAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVT 316
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W M+ G ++ +D LF M++ G+ +S+TL L A +++G ++HG +
Sbjct: 317 WNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIV 376
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R D+ L ++++ +Y + + A VF D V +++ISGYV N E A +
Sbjct: 377 RNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVK 436
Query: 256 LFERM------PGKDFVSWT---------------------------------TMITGFS 276
+F + P V+ T ++ +S
Sbjct: 437 MFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYS 496
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G L+ S +F+ M KD+VTW ++IS F N + EEA F +M+ + V+ N +T+SS
Sbjct: 497 KCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISS 556
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+LSA A + G +IH ++K + +D+ +++L+ +Y KCGN+ A R+F ++ E+N
Sbjct: 557 ILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKN 616
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
VS+NS+IS + +GL +E+++L M++EG + +TFL+++SAC H G V+EG F+
Sbjct: 617 EVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFR 676
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
M Y+IEP EH +CMVD+ RAG L +A+ I M F+P G+WGALL A R H N+
Sbjct: 677 CMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNV 736
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+LA++A+Q L +L+P + YV++S++ +V G+ +++R K K+++K PG SW+ +
Sbjct: 737 ELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDV 796
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ HLF+A K+ D +EI ++L+++
Sbjct: 797 NNTSHLFVAADKNHPDSEEIYMSLKSL 823
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 154/546 (28%), Positives = 261/546 (47%), Gaps = 66/546 (12%)
Query: 25 EAFEIFATMP---MRNAVSYAAMITGFVRRGMFYEAEELYVNM---PARWRDS------V 72
+A +F+++P A+ + +I GF G A YV M P+ R V
Sbjct: 94 DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYV 153
Query: 73 CSNALISGYLKVGRCEEAARIFEAM-VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
+ G L +GR R A+ +++D+ +++ Y G + ARE+FD M E+
Sbjct: 154 VKSCAALGALHLGRLVH--RTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDER 211
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+ V W M+DGY+K LF MR G N TL C GVQ+H
Sbjct: 212 DCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLH 271
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
L ++G + ++ + N++++MY + ++EA ++F +M + D V+WN +ISG V NG ++
Sbjct: 272 TLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVD 331
Query: 252 EAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIEL-------------------- 287
+A RLF M D V+ +++ + ++ E+
Sbjct: 332 DALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALV 391
Query: 288 ---------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
F+ D V + +ISG+V N E A + F +L ++PN +
Sbjct: 392 DIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAV 451
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
++S L A A+ A + G ++H +V+K E ++++L+ +YSKCG + ++ +F+ +
Sbjct: 452 MVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKM 511
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
++ V++NSMIS FAQNG EEAL+LFR+M EG+ N +T S+LSAC GL
Sbjct: 512 SAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSAC--AGL--PAI 567
Query: 453 IYFKSMKTLYNIEPGPEHY-----ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
Y K + + I GP + ++D+ G+ G+L A+ + M E W +++
Sbjct: 568 YYGKEIHGI--IIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMP-EKNEVSWNSII 624
Query: 508 GAGRTH 513
A H
Sbjct: 625 SAYGAH 630
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 46/274 (16%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M+ + ++N+MI++ N EA ++F M M N V+ +++++ Y
Sbjct: 511 MSAKDEVTWNSMISSFAQNG-EPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYY 569
Query: 57 AEELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+E++ + P R D +ALI Y K G E A R+FE M EK+ V+W S++ Y
Sbjct: 570 GKEIHGIIIKGPIR-ADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYG 628
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
G V E+ DL M+ G + +T
Sbjct: 629 AHGLVKES-------------------------------VDLLCCMQEEGFKADHVTFLA 657
Query: 174 LFEACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-K 231
L AC + +EG+++ + + + + + ++ +Y R G +D+A + + M K
Sbjct: 658 LISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFK 717
Query: 232 RDAVSWNSLISGY-VH-NGEIEE--AYRLFERMP 261
DA W +L+ VH N E+ E + LF+ P
Sbjct: 718 PDAGIWGALLHACRVHRNVELAEIASQELFKLDP 751
>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 289/553 (52%), Gaps = 84/553 (15%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMV---- 98
AM GF GM EA+ ++ + P R++V N +IS Y+K RC +A +F MV
Sbjct: 143 AMYGGF---GMVDEAKRIF-DEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWSGE 198
Query: 99 -----------------------------------EKDVVAWGSMVDGYCKKGRVIEARE 123
+KDV ++VD Y K G + A
Sbjct: 199 RPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAV 258
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F+K+P +VV+W A++ G + +L L M+ G+ N TL+ + +AC
Sbjct: 259 VFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGA 318
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+ G Q+HG + + D D + ++ MY + GF+D+A KVF M +RD + WN+LISG
Sbjct: 319 FNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISG 378
Query: 244 YVHNGEIEEAYRLFERM--PGKDF-VSWTTMITGFSSKGNLEK----------------- 283
H+G E LF RM G D V+ TT+ S +LE
Sbjct: 379 CSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLL 438
Query: 284 ---------------------SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
+I++F D ++ T++++ + E+A + F++M
Sbjct: 439 SDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQM 498
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
LRK + P+ LSS+L+A A+ + QG Q+HAH++K SDV N+LV Y+KCG++
Sbjct: 499 LRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSI 558
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
DA F+ + E+ +VS+++MI G AQ+G G+ AL LF +M DEG+ PN IT SVLSAC
Sbjct: 559 EDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSAC 618
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
NH GLV++ YF+SMK + I+ EHYACM+DILGRAG L +A++L+N+M F+ V
Sbjct: 619 NHAGLVDDAKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAV 678
Query: 503 WGALLGAGRTHLN 515
WGALLGA R +L
Sbjct: 679 WGALLGASRLNLQ 691
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 222/477 (46%), Gaps = 57/477 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F +P VS+++++T + GM +A + +M R R C+ + LK
Sbjct: 56 ARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSM--RGRGVPCNEYALPIVLK-- 111
Query: 86 RCEEAARIFEAMVE---------KDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNVVA 135
C R F A V +DV ++V Y G V EA+ IFD+ E+N V+
Sbjct: 112 -CAPDVR-FGAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVS 169
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W M+ Y+K D D +F M G N + + AC + G QVHG+V
Sbjct: 170 WNGMISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVV 229
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R G+D D+ N+++ MY +LG ++ A VF + D VSWN+LI+G V +G A
Sbjct: 230 RTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALE 289
Query: 256 LFERM-------------------PGKDFVSWTTMITGF--------------------S 276
L +M G + I GF +
Sbjct: 290 LLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYA 349
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK--DVRPNQLTL 334
G L+ + ++F+ MP +D + W A+ISG ++ ++ E F M ++ D+ N+ TL
Sbjct: 350 KDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTL 409
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
++VL ++A+ + Q+HA K+ + SD + N L+ Y KCG + A ++F
Sbjct: 410 AAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCS 469
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+I+S SM++ +Q GE+A+ LF +M +GL P+ S+L+AC + E+G
Sbjct: 470 DDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQG 526
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 137/281 (48%), Gaps = 12/281 (4%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+A ++F MP R+ + + A+I+G G E L+ M D + ++ LK
Sbjct: 356 DARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKS 415
Query: 85 GRCEEA---ARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
EA + A+ EK D ++D Y K GR+ A ++F++ ++++
Sbjct: 416 TASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISS 475
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
T+M+ + D ED LF+ M R G+ +S L+ L AC Y +G QVH + +
Sbjct: 476 TSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIK 535
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
F D+ GN+++ Y + G +++A+ FS + ++ VSW+++I G +G + A L
Sbjct: 536 RQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALEL 595
Query: 257 FERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
F RM + ++ T++++ + G ++ + + F M E
Sbjct: 596 FHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKE 636
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T+ S L+ A+ +L G+ +H+H++K + + S N L+S YS+C A +F I
Sbjct: 6 TIGSALARFGASRSLLAGAHLHSHLLKSGLLA--SYSNHLLSFYSRCRLPSAARAVFDEI 63
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ VS++S+++ ++ NG+ +AL FR M+ G+ N+ VL
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVL 110
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALIS 79
SI +A F+ +P + VS++AMI G + G A EL+ M +++ +++S
Sbjct: 557 SIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLS 616
Query: 80 GYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNV 133
G ++A + FE+M +++ + M+D + G++ +A E+ + MP + N
Sbjct: 617 ACNHAGLVDDAKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANA 676
Query: 134 VAWTAMV 140
W A++
Sbjct: 677 AVWGALL 683
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 201/627 (32%), Positives = 320/627 (51%), Gaps = 52/627 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALIS 79
A +F +P + + + +I + G F A +LY +M P ++ A S
Sbjct: 62 ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKA-CS 120
Query: 80 GYLKVG---RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
G L + A++F +E DV ++VD Y K G ++EA+ +F M ++VVAW
Sbjct: 121 GLLAIEDGVEIHSHAKMFG--LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAW 178
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
AM+ G +D L + M+ G+ NS T+ + G G +HG R
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVR 238
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
FD +++G ++ MY + + A K+F +M R+ VSW+++I GYV + ++EA L
Sbjct: 239 RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALEL 298
Query: 257 FERMPGKDFVSWT----------------------------------------TMITGFS 276
F++M KD + T T+++ ++
Sbjct: 299 FDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYA 358
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G ++ +I F+ M KD V+++AI+SG V N A F M + P+ T+
Sbjct: 359 KCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
VL A + A L G H +++ +D I N+L+ +YSKCG + A +F +D +
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 478
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
IVS+N+MI G+ +GLG EAL LF + GL P+ ITF+ +LS+C+H GLV EG ++F
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
+M ++I P EH CMVDILGRAG + EA I +M FEP +W ALL A R H N+
Sbjct: 539 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 598
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+L + ++ + L P+S +V+LS++YS G+ D +R+ +K ++K PGCSWI +
Sbjct: 599 ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEI 658
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTI 603
VH F+ G +S L L +I L+ +
Sbjct: 659 NGIVHAFVGGDQSHLQLSQINRKLEEL 685
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/558 (25%), Positives = 256/558 (45%), Gaps = 85/558 (15%)
Query: 33 MPMRNAV--SYAAMITGFVRRGMFYEAEELYVNMPARWR--DSVCSNALISGYLKVGRCE 88
MP+R V +Y ++ ++ EA++++ + DS + L YL +
Sbjct: 1 MPLRXEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVV 60
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
A R+F+ + V+ W ++ Y AW DG
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAY----------------------AWNGPFDG------ 92
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
DL+ SM G+ N T + +AC +GV++H FG + D+ + +
Sbjct: 93 ---AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTA 149
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSW 268
++ Y + G + EA ++FS MS RD V+WN++I+G G ++A +L +M +
Sbjct: 150 LVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPN 209
Query: 269 TTMITGFSSKGNLEKSI---------------------------------------ELFN 289
++ I G K++ ++F+
Sbjct: 210 SSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFD 269
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLN 348
+M +++V+W+A+I G+V ++ +EA F +M+ KD + P +TL SVL A A L+
Sbjct: 270 VMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLS 329
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+G ++H +++K+ D+ + N+L+S+Y+KCG + DA R F ++ ++ VS+++++SG
Sbjct: 330 RGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCV 389
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG- 467
QNG AL++FR M+ G+ P+ T L VL AC+H+ ++ GF Y I G
Sbjct: 390 QNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHG-----YLIVRGF 444
Query: 468 -PEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
+ C ++D+ + G ++ A ++ N M ++G G L ++ L
Sbjct: 445 ATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHD 504
Query: 525 HL-MELEPDSATPYVVLS 541
L + L+PD T +LS
Sbjct: 505 LLALGLKPDDITFICLLS 522
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 209/700 (29%), Positives = 333/700 (47%), Gaps = 114/700 (16%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I +A F M +N +S+ ++I+G+ + G + A YV R R+ + ++SGY+
Sbjct: 291 IEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYV 350
Query: 83 KVGRCEEAARIFEAM----------------------------------------VEKDV 102
+VG EEA +F M + DV
Sbjct: 351 RVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV 410
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
++V Y G V A+++F++MP+ NVV+WT+++ GY + +++ MR+
Sbjct: 411 YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE 470
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G++ N T + +CG G QV G + ++GF+ + + NS+I+M+ ++EA
Sbjct: 471 GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 530
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------------------PGK 263
VF M++ D +SWN++IS Y H+G E+ R F M
Sbjct: 531 CYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSV 590
Query: 264 DFVSW--------------------TTMITGFSSKGNLEKSIELFNMMPEK--------- 294
D + W T++T +S G E + +F M E+
Sbjct: 591 DNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMM 650
Query: 295 -------------------------DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
D VTW A+I G NE+ EA + + + K +
Sbjct: 651 ACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPA 710
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N +T+ S L+A+A A L +G Q+H V+K+ ESD+ + N+ + +Y KCG + D ++
Sbjct: 711 NYITMVS-LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML 769
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
R+ +S+N +IS FA++G ++A F +M G P+ +TF+S+LSACNH GLV+
Sbjct: 770 PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVD 829
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
EG Y+ SM + + PG EH C++D+LGR+G L+ A I M P W +LL A
Sbjct: 830 EGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAA 889
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
R H NL+LA+ A+HL+EL+P + YV+ S++ + GK D +R + I+K P
Sbjct: 890 CRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQP 949
Query: 570 GCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
CSW+ LKDKVH F G K I L + K TKE
Sbjct: 950 ACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKE 989
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 262/493 (53%), Gaps = 31/493 (6%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAMVEKDV 102
+I +V+ G A ++ MP R SV S A++SGY + GR E+A +F M V
Sbjct: 71 LIIFYVKVGDVIAARNVFDGMPER---SVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGV 127
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
A ++VD + K G++ +A +F M E++VV+W AM+ GY +D F +F SM RG
Sbjct: 128 KANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRG 187
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDE 221
G+ + TL + A Q+HG++++ G+ YDI+ G +I Y + G +
Sbjct: 188 GLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTG-LLINAYAKNGSLRS 246
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVH----------------NGEIEEAYRLFERMPGKDF 265
A + M K+D S +LI+GY H +GEIE+A R F+ M K+
Sbjct: 247 AKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNV 306
Query: 266 VSWTTMITGFSSK--GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+SWT++I+G++ G++ + +F+ M +++ +W+ ++SG+V YEEA F +M
Sbjct: 307 ISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMW 366
Query: 324 RKDVRPNQLTLSSVLSASAATATL-NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
V PN ++S+++A + + + ++G Q+H VVK + DV + +LV Y G V
Sbjct: 367 GLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLV 426
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+A ++F + + N+VS+ S++ G++ +G E LN++++M+ EG+ NQ TF +V S+C
Sbjct: 427 YNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC 486
Query: 443 NHVGLVEEGFIYFKSMKTL--YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
GL+E+ + ++ + + Y E ++ + S+ EA + + M E
Sbjct: 487 ---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN-ECDI 542
Query: 501 GVWGALLGAGRTH 513
W A++ A H
Sbjct: 543 ISWNAMISAYAHH 555
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 193/432 (44%), Gaps = 58/432 (13%)
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
++G +H + GF D+ L +I Y ++G + A VF M +R VSW +++SGY
Sbjct: 47 KQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGY 106
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
NG E+A+ LF M + ++ S G +E + LF M E+D V+W A+I
Sbjct: 107 SQNGRFEKAFVLFSDMRHCGVKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIG 166
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN--- 361
G+ +++F F MLR + P+ TL SVL ASA L +QIH + ++
Sbjct: 167 GYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGS 226
Query: 362 --------------------------------------------MESDVSIQNSLVSLYS 377
E ++ N+L+ +Y+
Sbjct: 227 YDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYA 286
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
K G + DA R F ++E+N++S+ S+ISG+A++G G A R + DE N+ ++ +
Sbjct: 287 KSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHA--RYVFDEMRHRNEASWST 344
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
+LS VGL EE F M L +EP A ++ R+G +A+ + F
Sbjct: 345 MLSGYVRVGLYEEAVGLFCQMWGL-GVEPNGFMVASLITACSRSGYMAD--EGFQVHGFV 401
Query: 498 PPPGVWGAL-LGAGRTHLNLDLAKL-AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNR 555
G+ G + +G H + + AQ L E PD + V+S ++G GN
Sbjct: 402 VKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPD----HNVVSWTSLMVGYSDSGNP 457
Query: 556 VRMKKKLKRIRK 567
+ +R+R+
Sbjct: 458 GEVLNVYQRMRQ 469
>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
Length = 659
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 200/603 (33%), Positives = 319/603 (52%), Gaps = 20/603 (3%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---PARWRD-SVCSNAL--IS 79
A +F MP R+ VS+ A+I G+V +EA L+ + PA D SV S AL
Sbjct: 39 ARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKACG 98
Query: 80 GYLKVGRCEE-AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+G E A F+ + V ++++ Y + G++ + IF +M +N V WTA
Sbjct: 99 QSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWTA 158
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+V G ++ ++G F M R + +AC R + + G ++H V G
Sbjct: 159 IVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHTHVIVRG 218
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
D + + NS+I MY G M + +F MS+RD SW +LI Y G+ E+A F
Sbjct: 219 SDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQEEKAVATFL 278
Query: 259 RMP-------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
++ G +M+ +S+ G L+ + LF M +D +TW+ II G
Sbjct: 279 KIEIFRRTSQWTYFCLGDSLSVSNSMMKMYSTCGKLDSASVLFQGMRRRDIITWSTIIGG 338
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+ EE F F M + +P L+S+LS S A L QG Q+HA + + +E +
Sbjct: 339 YSQAGLGEEVFMCFSWMRQAGPKPTDPALASLLSVSGTMAVLEQGRQVHALALYLGLEQN 398
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+I+++L+++YSKCG++ +A +IF D +IVS +MI+G+A++G +EA++LF K
Sbjct: 399 STIRSALINMYSKCGSIEEASKIFEETDTDDIVSLTAMINGYAEHGNTKEAIDLFEKSLK 458
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
GL P+ +TF+SVL+AC+H G ++ GF YF M+ YNI P EHY CMVD+L RAG L+
Sbjct: 459 VGLRPDTVTFISVLTACSHSGQLDLGFRYFNLMQDEYNIRPVKEHYGCMVDLLCRAGRLS 518
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYS 545
+A +IN M ++ VW LL A + + + + AA+ ++EL+P S T +V L+++YS
Sbjct: 519 DAEKMINEMPWKKDDVVWTTLLNACKAKGDTERGRRAAERILELDPTSETAFVTLANIYS 578
Query: 546 VIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
GK + VR K K + K PG S I + D+ F++G +S ++I L +
Sbjct: 579 STGKLEEAAHVRKAMKSKGVIKVPGWSSIKIMDRASTFVSGSQSHSQSEDIYSILDLVVS 638
Query: 606 GTK 608
G +
Sbjct: 639 GAE 641
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 40/273 (14%)
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
G + RF I L + R+ A +F M RD VSW ++I+GYV
Sbjct: 9 GTIQRFCTAASISLLEKPVEKIVRISNQGAARHLFDQMPHRDIVSWTAIINGYVTAANSF 68
Query: 252 EAYRLFERM-------PGKDFVSWTTMITGFSSK-------------------------- 278
EA LF + P +S G SS
Sbjct: 69 EALNLFSALLFDPAVSPDTSVLSVALKACGQSSNIGYGESLHAYAFKTSLLTSVFVGTNL 128
Query: 279 -------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
G ++K +F M ++ VTWTAI+SG V +++E +F EM R +
Sbjct: 129 LNMYMRTGKIDKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDD 188
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
++ L A A + G +IH HV+ ++ + + NSL+++Y++CG + D +F +
Sbjct: 189 FAFATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFES 248
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
+ ER++ S+ ++I ++Q G E+A+ F K++
Sbjct: 249 MSERDVFSWTTLIDAYSQMGQEEKAVATFLKIE 281
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 14 TALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY-VNMPARWR 69
+ALIN + C SI EA +IF + VS AMI G+ G EA +L+ ++ R
Sbjct: 403 SALINMYSKCGSIEEASKIFEETDTDDIVSLTAMINGYAEHGNTKEAIDLFEKSLKVGLR 462
Query: 70 -DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV-----AWGSMVDGYCKKGRVIEARE 123
D+V ++++ G+ + R F M ++ + +G MVD C+ GR+ +A +
Sbjct: 463 PDTVTFISVLTACSHSGQLDLGFRYFNLMQDEYNIRPVKEHYGCMVDLLCRAGRLSDAEK 522
Query: 124 IFDKMP-EKNVVAWTAMVDG 142
+ ++MP +K+ V WT +++
Sbjct: 523 MINEMPWKKDDVVWTTLLNA 542
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 207/688 (30%), Positives = 337/688 (48%), Gaps = 87/688 (12%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRN-AVSYAAMITGFVRRGMFYEAEELY 61
D + N ++ +LI++ + +A +F MP RN A S M++G+ R G A L+
Sbjct: 31 DPATYRLNLLLHSLISSG-RLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLF 89
Query: 62 VNMPARWRDSVCSNALISGYLKV--GRCEEAARIFEAMVEK------------------- 100
++ P RD+V +I + R +A +F M+ +
Sbjct: 90 LSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPAS 149
Query: 101 ------------------------DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+VV +++D YCK G + AR +F +MP ++ V +
Sbjct: 150 GGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTY 209
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
AM+ G K + DLF +MRR G+A T + + G QVHGLV+R
Sbjct: 210 NAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR 269
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
++ + NS++ Y + +DE K+F M +RD VS+N +I+GY N RL
Sbjct: 270 -ATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRL 328
Query: 257 FERMPGKDF-------------------------VSWTTMITGFSSK------------- 278
F M F + ++ G SS+
Sbjct: 329 FREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSK 388
Query: 279 -GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
G L+ + F +K V+WTA+I+G V N Q EEA + F M R + P++ T SS
Sbjct: 389 CGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSST 448
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+ AS+ A + G Q+H+++++ S V ++L+ +Y+KCG + +A + F + ERN
Sbjct: 449 IKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNS 508
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
+S+N++IS +A G + A+ +F M G P+ +TFLSVLSAC+H GL EE YF+
Sbjct: 509 ISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFEL 568
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
M+ Y I P EHY+C++D LGR G + +++ M FE P +W ++L + RTH N D
Sbjct: 569 MEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQD 628
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
LA++AA+ L + ATPYV+LS++++ GK D V+ + + +RK G SW+ +K
Sbjct: 629 LARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVK 688
Query: 578 DKVHLFLAGRKSCLDLKEIEVTLQTISK 605
KV+ F + ++ + EI+ L+ + K
Sbjct: 689 HKVYSFSSNDQTNPMITEIKDELERLYK 716
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 189/442 (42%), Gaps = 80/442 (18%)
Query: 1 MADRTSASYNAMITALINNNCS--IYEAFEIFATMPM-RNAVSYAAMIT--GFVRR---G 52
M +R + SYN MI N C+ + F ++ R A+ YA++++ G V G
Sbjct: 301 MIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIG 360
Query: 53 MFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY 112
A+ + + + + + + NALI Y K G + A F +K V+W +M+ G
Sbjct: 361 KQIHAQLVLLGLSS---EDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGC 417
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
+ G+ E+ LF MRR G++ + T +
Sbjct: 418 VQNGQQ-------------------------------EEALQLFCGMRRAGLSPDRATFS 446
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+A G Q+H + R G + G++++ MY + G +DEA + F M +R
Sbjct: 447 STIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPER 506
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
+++SWN++IS Y H G+ + A ++FE M + GF
Sbjct: 507 NSISWNAVISAYAHYGQAKNAIKMFEGM----------LCYGF----------------- 539
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD--VRPNQLTLSSVLSASAATATLNQG 350
+ D VT+ +++S +N EE ++F E++ + + P + S V+ +
Sbjct: 540 KPDSVTFLSVLSACSHNGLAEECMKYF-ELMEYEYGISPWKEHYSCVIDTLGRVGRFD-- 596
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV----VDAYRIFTNIDERNIVSYNSMISG 406
++ + +M E D I +S++ GN V A ++F+ + + Y + +
Sbjct: 597 -KVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFS-MGSTDATPYVILSNI 654
Query: 407 FAQNGLGEEALNLFRKMKDEGL 428
FA+ G E+A + + M+D GL
Sbjct: 655 FAKAGKWEDAAGVKKIMRDRGL 676
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 193/629 (30%), Positives = 332/629 (52%), Gaps = 83/629 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +T+ S+N +++A ++ A +F +P ++VS+ MI G+ G+F A
Sbjct: 74 MPLKTTFSWNTILSAHAKAG-NLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHA 132
Query: 61 YVNM------PARWRDS-------------------------------VCSNALISGYLK 83
++ M P ++ + +N+L++ Y K
Sbjct: 133 FLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAK 192
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
G A +F+ M KD W +M+ + + + A +FD+M + ++V+W +++ GY
Sbjct: 193 CGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGY 252
Query: 144 MKVDCFEDGFDL------FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
C + G+D+ ++ + + TL + AC + G Q+H + R
Sbjct: 253 ----CHQ-GYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRA 307
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
D +GN++I+MY + +G +E A+R+
Sbjct: 308 DVDIAGAVGNALISMYAK-------------------------------SGAVEVAHRIV 336
Query: 258 E--RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
E P + +++T+++ G+ G+++ + +F+ + +D V WTA+I G+ N +A
Sbjct: 337 EITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDA 396
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F M+R+ +PN TL++VLS ++ A+L+ G Q+HA +++ S VS+ N+L+++
Sbjct: 397 LVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITM 456
Query: 376 YSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
YS+ G++ DA +IF +I R+ +++ SMI AQ+GLG EA+ LF KM L P+ IT
Sbjct: 457 YSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHIT 516
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
++ VLSAC HVGLVE+G YF MK ++NIEP HYACM+D+LGRAG L EA + I +M
Sbjct: 517 YVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNM 576
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
EP WG+LL + R H +DLAK+AA+ L+ ++P+++ Y+ L++ S GK D
Sbjct: 577 PIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAA 636
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+VR K K ++K G SW+ +K+KVH+F
Sbjct: 637 KVRKSMKDKAVKKEQGFSWVQIKNKVHIF 665
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 244/516 (47%), Gaps = 78/516 (15%)
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
R+ +N L++ Y+K G +A R+F+ M K +W +++ + K G + AR +FD
Sbjct: 44 RYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFD 103
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
++P+ + V+WT M+ GY + F+ FL M G++ T T + +C
Sbjct: 104 EIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDV 163
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +VH V + G + + NS++ MY + G A VF M +D +WN++IS ++
Sbjct: 164 GKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQ 223
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+ + A LF++M D VSW ++ITG+ +G +++E F+ M
Sbjct: 224 FCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFM--------------- 268
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+ ++P++ TL SVLSA A +L G QIHAH+V+ +++
Sbjct: 269 ---------------LKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAG 313
Query: 367 SIQNSLVSLYSKCGNVVDAYR---------------------------------IFTNID 393
++ N+L+S+Y+K G V A+R IF ++
Sbjct: 314 AVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLK 373
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
R++V++ +MI G+AQNGL +AL LFR M EG PN T +VLS + + ++ G
Sbjct: 374 HRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHG-- 431
Query: 454 YFKSMKTLYNIEPGPEHYA------CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
K L+ + E + ++ + R+GS+ +A + N + W +++
Sbjct: 432 -----KQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMI 486
Query: 508 GAGRTH-LNLDLAKLAAQHL-MELEPDSATPYVVLS 541
+ H L + +L + L + L+PD T VLS
Sbjct: 487 LSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLS 522
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 64/289 (22%)
Query: 187 GVQVHGLVSRFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G +H + + G Y + L N+++ +Y + G +A+++F M + SWN+++S +
Sbjct: 31 GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
G ++ A R+F+ +P D VSWTTMI G++ G
Sbjct: 91 KAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLG-------------------------- 124
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
++ A F+ M+ + P Q T ++VL++ AA L+ G ++H+ VVK+
Sbjct: 125 -----LFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGV 179
Query: 366 VSIQNSLVSLYSKCGN------VVDAYR-------------------------IFTNIDE 394
V + NSL+++Y+KCG+ V D R +F + +
Sbjct: 180 VPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTD 239
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSAC 442
+IVS+NS+I+G+ G AL F M K L P++ T SVLSAC
Sbjct: 240 PDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSAC 288
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/630 (31%), Positives = 320/630 (50%), Gaps = 43/630 (6%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
DR S + + S+ E E+F MP +N V++ +++TG M E L+
Sbjct: 131 DRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFF 190
Query: 63 NMPAR--WRDSVCSNALISGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKG 116
M A W + +++S G + R+ V+ V S+++ Y K G
Sbjct: 191 RMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG 250
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
V +A+ +F+ M +++V+W ++ G +C + LF R T + +
Sbjct: 251 LVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIK 310
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAV 235
C + Q+H V + GF + ++ Y + G + +A +FSM + R+ V
Sbjct: 311 LCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVV 370
Query: 236 SWNSLISGYVHNGEIEEAYRLFERM------PGKDFVS---------------------- 267
SW ++ISG + NG+I A LF RM P + S
Sbjct: 371 SWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTN 430
Query: 268 -------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
T ++ +S G+ E ++ +F M+ +KD V W+A++S E A F
Sbjct: 431 YQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFN 490
Query: 321 EMLRKDVRPNQLTLSSVLSASAA-TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+M + ++PN+ T+SSV+ A A +A ++QG Q HA +K + + ++LVS+YS+
Sbjct: 491 KMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRK 550
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
GN+ A +F +R++VS+NSMISG+AQ+G +A+ FR+M+ G+ + +TFL+V+
Sbjct: 551 GNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVI 610
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
C H GLV EG YF SM + I P EHYACMVD+ RAG L E + LI M F
Sbjct: 611 MGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAG 670
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
VW LLGA R H N++L K +A L+ LEP ++ YV+LS++Y+ GK ++ + VR
Sbjct: 671 AMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKL 730
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
++++K GCSWI +K+KVH F+A KS
Sbjct: 731 MDYRKVKKEAGCSWIQIKNKVHSFIAFDKS 760
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 214/460 (46%), Gaps = 56/460 (12%)
Query: 33 MPMRNA-VSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAA 91
+P R+A V ++ + RRGM E + + AR + +A +S LK R
Sbjct: 58 IPRRDAAVGANRVLFDYARRGMVPEVLDQFS--VARRGGVLVDSATLSCVLKACRSVPDR 115
Query: 92 RIFEAMV---------EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ E + +V A S+VD Y K G V E E+F+ MP+KNVV WT+++ G
Sbjct: 116 VLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTG 175
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ LF MR G+ N T + A G +VH +FG
Sbjct: 176 CAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSS 235
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE---- 258
+ + NS++ MY + G +++A VF+ M RD VSWN+L++G N EA +LF
Sbjct: 236 VFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRA 295
Query: 259 ---RMPGKDFVS--------------------------------WTTMITGFSSKGNLEK 283
+M + + T + +S G L
Sbjct: 296 TMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELAD 355
Query: 284 SIELFNMMP-EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
++ +F+M ++ V+WTAIISG + N A F M V PN+ T S++L AS
Sbjct: 356 ALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASL 415
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ QIHA V+K N + S+ +L++ YSK G+ DA IF I+++++V++++
Sbjct: 416 SILP----PQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSA 471
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
M+S AQ G E A LF KM +G+ PN+ T SV+ AC
Sbjct: 472 MLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDAC 511
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 291 MPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+P +D V ++ + E F R V + TLS VL A +
Sbjct: 58 IPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVL 117
Query: 350 GSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G Q+H VK + +VS SLV +Y KCG+V + +F + ++N+V++ S+++G A
Sbjct: 118 GEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCA 177
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ E + LF +M+ EG+ PN TF SVLSA G ++ G
Sbjct: 178 HAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLG 220
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 321/615 (52%), Gaps = 71/615 (11%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGM--FYEAEELYVNMPARWRDSVCSNALIS 79
SI +A +F ++ ++ VS+ +I G+ ++G + EL+ M R +++ + S
Sbjct: 60 SIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRM--RAENTLPNGHTFS 117
Query: 80 GYLKV--------GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
G G + A + DV S+++ YCK G +++AR++FD +PE+
Sbjct: 118 GVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPER 177
Query: 132 NVVAWTAMVDGY-MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
N V+W ++ GY M+ FE ++LFL MRR A + T + A G Q+
Sbjct: 178 NTVSWATIISGYAMERMAFE-AWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQI 236
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H L + G +GN+++TMYG+ G +D+A K F + +D ++W+++I+GY G+
Sbjct: 237 HCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDS 296
Query: 251 EEAYRLFERM------PGK-DFVSWTT------------MITGFSSKGNLEKSIEL---- 287
EA LF M P + FV I G+S K E I
Sbjct: 297 HEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGF 356
Query: 288 ----------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
F+ + E D V WT+ M + + P++
Sbjct: 357 DYLKAKCGSLVDARKGFDYLKEPDIVLWTSC------------------RMQMERIMPHE 398
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
LT++SVL A ++ A L QG QIHA +K +V I ++L ++Y+KCG++ D +F
Sbjct: 399 LTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRR 458
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ R+I+++N+MISG +QNG G +AL LF +++ P+ +TF++VLSAC+H+GLVE G
Sbjct: 459 MPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERG 518
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
+YF+ M + I P EHYACMVDIL RAG L E + I S T + +W LLGA R
Sbjct: 519 KVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACR 578
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
+ N +L A + LMEL ++ Y++LS +Y+ +G+ D RVR KL+ + K PGC
Sbjct: 579 NYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGC 638
Query: 572 SWIILKDKVHLFLAG 586
SWI LK +VH+F+ G
Sbjct: 639 SWIELKSQVHVFVVG 653
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 191/401 (47%), Gaps = 60/401 (14%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF--DLFLSMRRGGM 164
S+V+ Y K G +++A+ +F+ + K+VV+W +++GY + F +LF MR
Sbjct: 50 SLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENT 109
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
N T + +F A G+Q H L + YD+ +G+S+I MY ++G M +A K
Sbjct: 110 LPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARK 169
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF---ERMPGK----------------DF 265
VF + +R+ VSW ++ISGY EA+ LF R G D
Sbjct: 170 VFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDL 229
Query: 266 VSW--------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
V + ++T + G L+ + + F + +KDD+TW+A+I+G
Sbjct: 230 VHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITG 289
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+ EA F M +P++ T V++A + L +G QIH + +K E
Sbjct: 290 YAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQ 349
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ + L +KCG++VDA + F + E +IV + S +M+
Sbjct: 350 IYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTSC------------------RMQM 391
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIE 465
E ++P+++T SVL AC+ + +E+G I+ +++K +++E
Sbjct: 392 ERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLE 432
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 169/334 (50%), Gaps = 42/334 (12%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L C R ++G +H + R G + L NS++ +Y + G + +A VF ++ +D
Sbjct: 16 LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75
Query: 234 AVSWNSLISGYVHNGEIEEAY--RLFERMPGK---------------------------- 263
VSWN LI+GY G + ++ LF+RM +
Sbjct: 76 VVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D +++I + G + + ++F+ +PE++ V+W IISG+
Sbjct: 136 HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA+ F+ M R++ ++ +SVLSA ++ G QIH +K + S S+ N+L
Sbjct: 196 FEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNAL 255
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V++Y KCG + DA++ F +++ +++++MI+G+AQ G EALNLF M G P++
Sbjct: 256 VTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSE 315
Query: 433 ITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIE 465
TF+ V++AC+ +G +EEG I+ S+K Y +
Sbjct: 316 FTFVGVINACSDIGALEEGKQIHGYSLKAGYECQ 349
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 163/388 (42%), Gaps = 97/388 (25%)
Query: 1 MADRTSASYNAMI-TALINNNCSI---YEAFEIFATMPMRNAVSYAAMITGFVRRGMFYE 56
+A +TS Y+ + ++LIN C I +A ++F T+P RN VS+A +I+G+ M +E
Sbjct: 138 LAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFE 197
Query: 57 AEELYVNMPAR--------------------------------WRDSVCS-----NALIS 79
A EL++ M ++ + S NAL++
Sbjct: 198 AWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVT 257
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM----------- 128
Y K G ++A + FE +KD + W +M+ GY + G EA +F M
Sbjct: 258 MYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFT 317
Query: 129 --------------PEKNVVAWTAMVDGYMKVDCFEDGFDLF------LSMRRGGMAF-- 166
E + ++ GY F GFD L R G +
Sbjct: 318 FVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLK 377
Query: 167 -------------------NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
+ +T+ + AC +G Q+H ++GF ++ +G+
Sbjct: 378 EPDIVLWTSCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGS 437
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGK 263
++ TMY + G +++ N VF M RD ++WN++ISG NGE +A LFE +
Sbjct: 438 ALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKP 497
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMM 291
D+V++ +++ S G +E+ F MM
Sbjct: 498 DYVTFVNVLSACSHMGLVERGKVYFRMM 525
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 176/373 (47%), Gaps = 22/373 (5%)
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ--YEEAFRWFIEMLRKDV 327
+++ ++ G++ K+ +F + KD V+W +I+G+ Y F M ++
Sbjct: 50 SLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENT 109
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
PN T S V +A++++ G Q HA +K + DV + +SL+++Y K G ++DA +
Sbjct: 110 LPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARK 169
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F I ERN VS+ ++ISG+A + EA LF M+ E ++ + SVLSA L
Sbjct: 170 VFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDL 229
Query: 448 VEEG-FIYFKSMKT-LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
V G I+ ++K L +I +V + G+ G L +A ++ + W A
Sbjct: 230 VHYGKQIHCLALKNGLLSIASVGN---ALVTMYGKCGCLDDAFKTFE-LSGDKDDITWSA 285
Query: 506 LLG----AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR---M 558
++ AG +H L+L HL +P T +V + + S IG +G ++ +
Sbjct: 286 MITGYAQAGDSHEALNL--FYNMHLNGNKPSEFT-FVGVINACSDIGALEEGKQIHGYSL 342
Query: 559 KKKLK-RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDW 617
K + +I G + LK K + RK LKE ++ L T + E P H+
Sbjct: 343 KAGYECQIYFRKGFDY--LKAKCGSLVDARKGFDYLKEPDIVLWTSCRMQMERIMP-HEL 399
Query: 618 SLLGLERDWSYTA 630
++ + R S A
Sbjct: 400 TMASVLRACSSLA 412
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P + +L L +G IHA +++ S V + NSLV+LY+KCG++V A +
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 389 FTNIDERNIVSYNSMISGFAQNG-LGEE-ALNLFRKMKDEGLVPNQITFLSVLSA 441
F +I +++VS+N +I+G++Q G +G + LF++M+ E +PN TF V +A
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTA 122
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 196/625 (31%), Positives = 316/625 (50%), Gaps = 72/625 (11%)
Query: 10 NAMITALINNNCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
NA+IT + C + E +F MP R+ V++ +I+G + A E++ M +
Sbjct: 182 NALITLYLR--CGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSG 239
Query: 69 --RDSVCSNALISGYLKVGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
D V ++L++ +G ++ ++ F+A + D + GS++D Y K G V A
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETAL 299
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
IF+ NVV W ++ + +++ F+LF M+ G+ N T + C
Sbjct: 300 VIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTG 359
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G Q+H L + GF+ D+ + +I MY + G++++A +V M+ ++D VSW S+I+
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIA 419
Query: 243 GYVHNGEIEEAYRLFERMP-------------------------------GKDFVS---- 267
GYV + ++A F+ M + +VS
Sbjct: 420 GYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSG 479
Query: 268 ----WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
W ++ ++ G + ++ F + KD++TW ++SGF + +EEA + F+ M
Sbjct: 480 DVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMD 539
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ V+ N T S LSASA A + QG QIHA V+K + + N+L+SLY KCG+
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
DA F+ + ERN VS+N++I+ +Q+G G EAL+ F +MK EGL
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGLS-------------- 645
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
YFKSM Y I P P+HYAC++DI GRAG L A + M VW
Sbjct: 646 ----------YFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVW 695
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
LL A + H N+++ +LAA+HL+ELEP + YV+LS+ Y+V GK + ++VR + +
Sbjct: 696 RTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDR 755
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRK 588
+RK PG SWI +K+ VH F G +
Sbjct: 756 GVRKEPGRSWIEVKNVVHAFFVGDR 780
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 263/523 (50%), Gaps = 50/523 (9%)
Query: 12 MITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------P 65
++ L + N + A +F + R+ VS+ AM++G+ + G+ EA LY M P
Sbjct: 82 LLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVP 141
Query: 66 ARW-RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
+ SV S+ + GR A + + V +++ Y + G A +
Sbjct: 142 TPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVG-NALITLYLRCGSFRLAERV 200
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F MP ++ V + ++ G+ + E ++F M+ G++ + +T++ L AC
Sbjct: 201 FYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDL 260
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
++G Q+H + + G D I+ S++ +Y + G ++ A +F++ ++ + V WN ++ +
Sbjct: 261 QKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAF 320
Query: 245 VHNGEIEEAYRLFERM------PGK-------------------DFVSWTTMITGFSSK- 278
++ +++ LF +M P + + + ++ TGF S
Sbjct: 321 GQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDM 380
Query: 279 -------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
G LEK+ + M+ EKD V+WT++I+G+V +E ++A F EM +
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKC 440
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ P+ + L+S +S A + QG QIHA V DVSI N+LV+LY++CG + +A
Sbjct: 441 GIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREA 500
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+ F I+ ++ +++N ++SGFAQ+GL EEAL +F +M G+ N TF+S LSA ++
Sbjct: 501 FSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANL 560
Query: 446 GLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+++G I+ + +KT ++ E E ++ + G+ GS +A
Sbjct: 561 AEIKQGKQIHARVIKTGHSFE--TEVGNALISLYGKCGSFEDA 601
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 204/459 (44%), Gaps = 73/459 (15%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
+D + N LI Y K G A R+FE + +D V+W +M+ GY + G
Sbjct: 75 KDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG------------ 122
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
E+ L+ M R G+ L+ + +C + + +G
Sbjct: 123 -------------------LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR 163
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
VH + GF + +GN++IT+Y R G A +VF M RD V++N+LISG+
Sbjct: 164 SVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCA 223
Query: 249 EIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIEL----------------- 287
E A +FE M D V+ ++++ +S G+L+K +L
Sbjct: 224 HGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEG 283
Query: 288 ------------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
FN+ + V W I+ F ++F F +M +RP
Sbjct: 284 SLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRP 343
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
NQ T +L T ++ G QIH+ VK ESD+ + L+ +YSK G + A R+
Sbjct: 344 NQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVL 403
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ E+++VS+ SMI+G+ Q+ ++AL F++M+ G+ P+ I S +S C + +
Sbjct: 404 EMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMR 463
Query: 450 EGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+G I+ + + Y+ + + +V++ R G + EA
Sbjct: 464 QGLQIHARVYVSGYSGDVSI--WNALVNLYARCGRIREA 500
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 161/349 (46%), Gaps = 41/349 (11%)
Query: 153 FDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
LF R + AC G R++ ++H G D I+GN +I
Sbjct: 26 LSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLID 85
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP---------- 261
+Y + G + A +VF +S RD VSW +++SGY NG EEA L+ +M
Sbjct: 86 LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYV 145
Query: 262 -------------------------GKDFVSWT----TMITGFSSKGNLEKSIELFNMMP 292
+ F S T +IT + G+ + +F MP
Sbjct: 146 LSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMP 205
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+D VT+ +ISG E A F EM + P+ +T+SS+L+A A+ L +G+Q
Sbjct: 206 HRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H+++ K M SD ++ SL+ LY KCG+V A IF + N+V +N ++ F Q
Sbjct: 266 LHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQIND 325
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKT 460
++ LF +M+ G+ PNQ T+ +L C G ++ G I+ S+KT
Sbjct: 326 LAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKT 374
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 129/239 (53%), Gaps = 11/239 (4%)
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
R GKD + +I +S G + + +F + +D+V+W A++SG+ N EEA
Sbjct: 71 RGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWL 130
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
+ +M R V P LSSVLS+ QG +HA K S+ + N+L++LY +
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLR 190
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG+ A R+F ++ R+ V++N++ISG AQ GE AL +F +M+ GL P+ +T S+
Sbjct: 191 CGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSL 250
Query: 439 LSACNHVGLVEEG-----FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
L+AC +G +++G +++ M + Y +E ++D+ + G + A+ + N
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGMSSDYIME------GSLLDLYVKCGDVETALVIFN 303
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG-SQIHAHVVKMN 361
++GF+ E + F + R+ L + L A Q +IHA +
Sbjct: 13 LAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAITRG 72
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ D + N L+ LYSK G V+ A R+F + R+ VS+ +M+SG+AQNGLGEEAL L+R
Sbjct: 73 LGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYR 132
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+M G+VP SVLS+C L +G
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQG 162
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 197/615 (32%), Positives = 324/615 (52%), Gaps = 52/615 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALIS 79
A ++F +P +A +Y A+I + RG F+ A +LY +M P ++ A +
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA 111
Query: 80 -GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
L GR A + D+ +++D Y + R A +F KMP ++VVAW A
Sbjct: 112 LADLCAGRTIHA-HAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNA 170
Query: 139 MVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
M+ GY + L M+ RGG+ N+ TL L + +G VH R
Sbjct: 171 MLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRA 230
Query: 198 GFDYD---IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
D + +++G +++ MY + + A +VF M+ R+ V+W++LI G+V + EA+
Sbjct: 231 YLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAF 290
Query: 255 RLFERM--PGKDFVSWT--------------------------------------TMITG 274
LF+ M G F+S T ++++
Sbjct: 291 NLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSM 350
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ G + ++ LF+ + KD +++ A++SG+V N + EEAF F +M +V+P+ T+
Sbjct: 351 YAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATM 410
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S++ A + A L G H V+ + + SI NSL+ +Y+KCG + + ++F +
Sbjct: 411 VSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPA 470
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
R+IVS+N+MI+G+ +GLG+EA LF MK++G P+ +TF+ +++AC+H GLV EG +
Sbjct: 471 RDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHW 530
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F +M Y I P EHY CMVD+L R G L EA I SM + VWGALLGA R H
Sbjct: 531 FDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHK 590
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
N+DL K ++ + +L P+ +V+LS+++S G+ + VR+ +K+K +KSPGCSWI
Sbjct: 591 NIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWI 650
Query: 575 ILKDKVHLFLAGRKS 589
+ +H F+ G +S
Sbjct: 651 EINGSLHAFVGGDQS 665
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 194/396 (48%), Gaps = 44/396 (11%)
Query: 100 KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM 159
KD W ++ + +G++ AR++FD++P + A+ A++ Y F DL+ SM
Sbjct: 31 KDNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSM 90
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
+ N T + +AC G +H + G D+ + ++I +Y R
Sbjct: 91 LYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARF 150
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY-----------------RLFERMP- 261
A VF+ M RD V+WN++++GY ++G A L +P
Sbjct: 151 GPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPL 210
Query: 262 ---------GKDFVSW----------------TTMITGFSSKGNLEKSIELFNMMPEKDD 296
G ++ T ++ ++ +L + +F+ M +++
Sbjct: 211 LAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNE 270
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR-PNQLTLSSVLSASAATATLNQGSQIHA 355
VTW+A+I GFV ++ EAF F +ML + + + +++S L A+ A L G+Q+HA
Sbjct: 271 VTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHA 330
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
+ K + +D++ NSL+S+Y+K G + +A +F I ++ +SY +++SG+ QNG EE
Sbjct: 331 LLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEE 390
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
A +F+KM+ + P+ T +S++ AC+H+ ++ G
Sbjct: 391 AFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHG 426
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
KD W + ++G L + ++F+ +P D + A+I + + A + M
Sbjct: 31 KDNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSM 90
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L V PN+ T VL A +A A L G IHAH + + +D+ + +L+ LY +C
Sbjct: 91 LYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARF 150
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE-GLVPNQITFLSVLSA 441
A +F + R++V++N+M++G+A +G+ A+ M+D GL PN T +S+L
Sbjct: 151 GPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPL 210
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHY---ACMVDILGRAGSLAEAIDLINSMTFEP 498
G + +G Y ++ E ++D+ + L A + + MT
Sbjct: 211 LAQHGALFQGTSVHAYCLRAY-LDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRN 269
Query: 499 PPGVWGALLG 508
W AL+G
Sbjct: 270 EV-TWSALIG 278
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 133/277 (48%), Gaps = 13/277 (4%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA--RWRDSVCSNALISG 80
I EA +F + +++ +SY A+++G+V+ G EA ++ M A D +LI
Sbjct: 357 INEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPA 416
Query: 81 Y-----LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
L+ GRC + I + + + S++D Y K GR+ +R++FDKMP +++V+
Sbjct: 417 CSHLAALQHGRCSHGSVIIRGLALETSIC-NSLIDMYAKCGRIDLSRQVFDKMPARDIVS 475
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ-VHGLV 194
W M+ GY ++ LFLSM+ G + +T L AC EG +
Sbjct: 476 WNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMT 535
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANK-VFSMMSKRDAVSWNSLISGYVHNGEIE-- 251
++G + ++ + R GF+DEA + + SM K D W +L+ + I+
Sbjct: 536 HKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLG 595
Query: 252 -EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
+ R+ +++ + ++ + FS+ G +++ E+
Sbjct: 596 KQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV 632
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 201/651 (30%), Positives = 322/651 (49%), Gaps = 77/651 (11%)
Query: 19 NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-------------- 64
NN +A + +P N S++ +I F + F+ A + M
Sbjct: 60 NNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPS 119
Query: 65 ------------PARW-----------RDSVCSNALISGYLKVGRCEEAARIFEAMVEKD 101
PAR DS ++L+ Y+K + +A R+F+ M E D
Sbjct: 120 AVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPD 179
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMP----EKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
VV+W ++V Y ++G V EA+ +F +M + N+++W M+ G+ + + +FL
Sbjct: 180 VVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFL 239
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
M G + T++ + A G G+ +HG V + G D + +++I MYG+
Sbjct: 240 DMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCS 299
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSS 277
E ++VF M D S N+ I G S
Sbjct: 300 CTSEMSQVFDQMDHMDVGSCNAF-------------------------------IFGLSR 328
Query: 278 KGNLEKSIELFNMMPEK----DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
G +E S+ LF + ++ + V+WT++I+ N + EA F EM V+PN +T
Sbjct: 329 NGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVT 388
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ +L A A L G H ++ + +DV + ++L+ +Y+KCG + + F I
Sbjct: 389 IPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIP 448
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+N+V +N++I+G+A +G +EA+ +F M+ G P+ I+F VLSAC+ GL EEG
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSY 508
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
YF SM + Y IE EHYACMV +L RAG L +A +I M P VWGALL + R H
Sbjct: 509 YFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVH 568
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N+ L ++AA+ L ELEP + Y++LS++Y+ G + NRVR K K +RK+PGCSW
Sbjct: 569 NNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSW 628
Query: 574 IILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLE 623
I +K+KVH+ LAG KS + +I L +S K+ + P+ ++ L +E
Sbjct: 629 IEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVE 679
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 192/415 (46%), Gaps = 37/415 (8%)
Query: 75 NALISGYLKVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N L S + + +A A I + + D ++ Y +A + D +PE NV
Sbjct: 20 NCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNV 79
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+++ ++ + K F F M G+ ++ L +AC + QVHG+
Sbjct: 80 FSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI 139
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
S GFD D + +S++ MY + + +A++VF M + D VSW++L++ Y G ++EA
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199
Query: 254 YRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
RLF M + +SW MI GF+ G
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSG------------------------------ 229
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
Y EA F++M + P+ T+SSVL A L G IH +V+K + SD +
Sbjct: 230 -LYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVS 288
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
++L+ +Y KC + ++F +D ++ S N+ I G ++NG E +L LFR++KD+G+
Sbjct: 289 SALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGME 348
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
N +++ S+++ C+ G E F+ M+ + ++P C++ G +L
Sbjct: 349 LNVVSWTSMIACCSQNGRDIEALELFREMQ-IAGVKPNSVTIPCLLPACGNIAAL 402
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 205/632 (32%), Positives = 324/632 (51%), Gaps = 56/632 (8%)
Query: 35 MRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIF 94
++ ++ +ITG + +++++ + P+ + SN Y K G A F
Sbjct: 16 LKACIAQRDLITGKILHALYFKS----LIPPSTYL----SNHFTLLYSKCGSLHNAQTSF 67
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
+V ++ ++++ Y K + AR +FD++P+ ++V++ ++ Y
Sbjct: 68 HLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLR 127
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
LF +R + + TL+ + ACG Q+H V G D + N+++ Y
Sbjct: 128 LFEEVRELRLGLDGFTLSGVITACGDDVGLVR--QLHCFVVVCGHDCYASVNNAVLACYS 185
Query: 215 RLGFMDEANKVFSMMSK---RDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVS 267
R GF+ EA +VF M + RD VSWN++I + E EA LF M + D +
Sbjct: 186 RKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFT 245
Query: 268 WTTMITGFSS------------------------------------KGNLEKSIELFNMM 291
+++T F+ G++ + ++F +
Sbjct: 246 MASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEI 305
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRW-FIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
D V W +ISGF E E W F EM R RP+ + V SA + ++ + G
Sbjct: 306 TAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLG 365
Query: 351 SQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
Q+HA +K ++ + VS+ N+LV++YSKCGNV DA R+F + E N VS NSMI+G+AQ
Sbjct: 366 KQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQ 425
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+G+ E+L LF M ++ + PN ITF++VLSAC H G VEEG YF MK + IEP E
Sbjct: 426 HGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAE 485
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
HY+CM+D+LGRAG L EA +I +M F P W LLGA R H N++LA AA + L
Sbjct: 486 HYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRL 545
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
EP +A PYV+LS++Y+ + + V+ + + ++K PGCSWI + KVH+F+A S
Sbjct: 546 EPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTS 605
Query: 590 CLDLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
+KEI V + + K K+ + P W+L+
Sbjct: 606 HPMIKEIHVYMGKMLKKMKQAGYVPDIRWALV 637
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 146/307 (47%), Gaps = 22/307 (7%)
Query: 7 ASYNAMITALINNNCSIYEAFEIFATMPM---RNAVSYAAMIT--GFVRRGMFYEAEELY 61
AS N + A + + EA +F M R+ VS+ AMI G R GM EA L+
Sbjct: 174 ASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGM--EAVGLF 231
Query: 62 VNMPARWR--DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGS-----MVDGYCK 114
M R D ++++ + V R F M+ K S ++D Y K
Sbjct: 232 REMVRRGLKVDMFTMASVLTAFTCVKDLV-GGRQFHGMMIKSGFHGNSHVGSGLIDLYSK 290
Query: 115 -KGRVIEAREIFDKMPEKNVVAWTAMVDGY-MKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
G ++E R++F+++ ++V W M+ G+ + D EDG F M+R G + +
Sbjct: 291 CAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFV 350
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYD-IILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ AC G QVH L + Y+ + + N+++ MY + G + +A +VF M +
Sbjct: 351 CVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPE 410
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIEL 287
+ VS NS+I+GY +G E+ RLFE M KD +++ +++ G +E+ +
Sbjct: 411 HNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKY 470
Query: 288 FNMMPEK 294
FNMM E+
Sbjct: 471 FNMMKER 477
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 36/275 (13%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T L +AC G +H L + L N +Y + G + A F +
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
+ S+N+LI+ Y + I A R+F+ +P D VS+ T+I ++ +G ++ LF
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+ E LR + + TLS V++A L +
Sbjct: 131 EVRE-----------------------------LRLGL--DGFTLSGVITACGDDVGLVR 159
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE---RNIVSYNSMISG 406
Q+H VV + S+ N++++ YS+ G + +A R+F + E R+ VS+N+MI
Sbjct: 160 --QLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVA 217
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
Q+ G EA+ LFR+M GL + T SVL+A
Sbjct: 218 CGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTA 252
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 33/155 (21%)
Query: 329 PNQL-TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN------ 381
P QL T ++L A A L G +HA K + + N LYSKCG+
Sbjct: 6 PLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQT 65
Query: 382 ---------------VVDAY----------RIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+++AY R+F I + +IVSYN++I+ +A G
Sbjct: 66 SFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPT 125
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSAC-NHVGLVEE 450
L LF ++++ L + T V++AC + VGLV +
Sbjct: 126 LRLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQ 160
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 196/646 (30%), Positives = 331/646 (51%), Gaps = 57/646 (8%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
+ + +L + SI EA +F + + Y M+ G+ + A M R+
Sbjct: 83 FQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRM--RY 140
Query: 69 RD------------SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
D VC + + LK G+ E ++ +V A +V+ Y K
Sbjct: 141 DDVKPVVYNFTYLLKVCGD---NADLKRGK-EIHGQLITNSFAANVFAMTGVVNMYAKCR 196
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
++ +A ++FD+MPE+++V+W ++ G+ + + +L L M+ G +SITL +
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLP 256
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
A G +HG R GF + + ++ MY + G ++ A +F M ++ VS
Sbjct: 257 AAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS 316
Query: 237 WNSLISGYVHNGEIEEAYRLFERM------P----------------------------- 261
WNS++ GYV NGE E+A +FE+M P
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376
Query: 262 ----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
G D ++I+ +S ++ + ++FN + + V+W A+I G+ N + EA
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALN 436
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F EM ++P+ T+ SV+ A A + IH +++ ++ ++ + +LV +YS
Sbjct: 437 CFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYS 496
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
KCG + A ++F I +R+++++N+MI G+ +GLG AL+LF KMK + PN IT+LS
Sbjct: 497 KCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLS 556
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
V+SAC+H GLV+EG +FKSMK Y +EP +HY MVD+LGRAG + EA D I +M
Sbjct: 557 VISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPIS 616
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
P V+GA+LGA + H N+++ + AA+ L EL PD +V+L+++Y+ K VR
Sbjct: 617 PGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVR 676
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ K ++K+PGCS + L+++VH F +G + K I L+ +
Sbjct: 677 KTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEEL 722
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 158/328 (48%), Gaps = 42/328 (12%)
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+L E C +E Q+ LV + G + + +++++ + G ++EA +VF + +
Sbjct: 54 VLLELCTSM---KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDK 110
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDF- 265
+++++ GY N +E A RM GK+
Sbjct: 111 LDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIH 170
Query: 266 ------------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+ T ++ ++ ++ + ++F+ MPE+D V+W II+GF N +
Sbjct: 171 GQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAK 230
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+A + M + RP+ +TL +VL A+A L G IH + ++ V+I +L
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+YSKCG+V A IF +D++ +VS+NSM+ G+ QNG E+A+ +F KM +EG+ P +
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTL 461
T + L AC +G +E G K + L
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQL 378
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 201/642 (31%), Positives = 351/642 (54%), Gaps = 56/642 (8%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
+ALI N +++A ++F M R+ V + M+ G+V+ G A EL+ +M R
Sbjct: 185 SALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDM----RA 240
Query: 71 SVCSN--ALISGYLKVGRCEE----AARIFEAMV----EKDVVAWGSMVDGYCKKGRVIE 120
S C A ++ +L V E ++ V E +V ++V Y K + +
Sbjct: 241 SGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDD 300
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
++F MP ++V W M+ G ++ + LF M++ G+ +S+TL L A
Sbjct: 301 GWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTD 360
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ +G ++HG + R D+ L ++++ +Y + + A V+ D V +++
Sbjct: 361 LNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTM 420
Query: 241 ISGYVHNGEIEEAYRLFERM----------------P----------GKDFVSW------ 268
ISGYV NG +EA ++F + P G++ S+
Sbjct: 421 ISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY 480
Query: 269 -------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+ ++ ++ G L+ S +F+ + KD+VTW ++IS F N + EEA F E
Sbjct: 481 EGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFRE 540
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + V+ + +T+SSVLSA A+ + G +IH V+K + +D+ +++L+ +Y KCGN
Sbjct: 541 MCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGN 600
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ A+R+F ++ E+N VS+NS+I+ + GL +E+++L R M++EG + +TFL+++SA
Sbjct: 601 LEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSA 660
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C H G V+EG F+ M Y I P EH+ACMVD+ RAG L +A++LI M F+P G
Sbjct: 661 CAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAG 720
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
+WGALL A R H N++LA++A+Q L +L+P ++ YV++S++ +V G+ ++VR K
Sbjct: 721 IWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMK 780
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+++K PG SW+ + + HLF+A KS D ++I ++L++I
Sbjct: 781 DTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSI 822
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 189/431 (43%), Gaps = 44/431 (10%)
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
P R +V + +L +G + + D +V Y R +A +
Sbjct: 38 PDRRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAV 97
Query: 125 FDKMPE---KNVVAWTAMVDGYMKVDCFEDGFDLFLSM--RRGGMAFNSITLTILFEACG 179
F +P + W ++ G + +L M +S T + ++C
Sbjct: 98 FSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCA 157
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
G VH G D D+ +G+++I MY G + +A +VF M++RD V WN
Sbjct: 158 ALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNV 217
Query: 240 LISGYVHNGEIEEAYRLFERMPGKD----------FVSWT-------------------- 269
++ GYV G + A LF M F+S +
Sbjct: 218 MMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYG 277
Query: 270 ---------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
T+++ ++ L+ +LF +MP D VTW +ISG V N ++A F
Sbjct: 278 LESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFC 337
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+M + +RP+ +TL S+L A NQG ++H ++V+ + DV + ++LV +Y KC
Sbjct: 338 DMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCR 397
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
V A ++ + ++V ++MISG+ NG+ +EA+ +FR + ++G+ PN + SVL
Sbjct: 398 AVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLP 457
Query: 441 ACNHVGLVEEG 451
AC + ++ G
Sbjct: 458 ACASMAAMKLG 468
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 315/584 (53%), Gaps = 45/584 (7%)
Query: 86 RCEEAARIF--EAMVE---KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
R + A R+ +A+V+ +++ ++V Y K RV +AR++FD+MPEK+ + W M+
Sbjct: 133 RDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMI 192
Query: 141 DGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG- 198
GY K + + + +F + ++ TL + A R G+Q+H L ++ G
Sbjct: 193 SGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ +D +L I++Y + G + + +F K D V++N++I GY NGE E + LF+
Sbjct: 253 YSHDYVL-TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 259 -------RMPGKDFVSW-----------------------------TTMITGFSSKGNLE 282
R+ VS T + T +S +E
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIE 371
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+ +LF+ PEK +W A+ISG+ N E+A F EM + + PN +T++ +LSA A
Sbjct: 372 SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA 431
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
L+ G +H V + ES + + +L+ +Y+KCG++ +A R+F + ++N V++N+
Sbjct: 432 QLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNT 491
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
MISG+ +G G+EALN+F +M + G+ P +TFL VL AC+H GLV+EG F SM Y
Sbjct: 492 MISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
EP +HYACMVDILGRAG L A+ I +M+ EP VW LLGA R H + +LA+
Sbjct: 552 GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTV 611
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
++ L EL+PD+ +V+LS+++S VR K +++ K+PG + I + + H+
Sbjct: 612 SEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHV 671
Query: 583 FLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
F +G +S +KEI L+ + +E + P+ + +L +E +
Sbjct: 672 FTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEE 715
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 202/448 (45%), Gaps = 52/448 (11%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTIL 174
G + AR+IF + +V + ++ G+ + +F +R+ + NS T
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
A F R G +HG G D +++LG++I+ MY + +++A KVF M ++D
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTT------------------------ 270
+ WN++ISGY N E+ ++F + + T
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 271 ------------MITGF----SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
++TGF S G ++ LF + D V + A+I G+ +N + E
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
+ F E++ R TL S++ S + IH + +K N S S+ +L +
Sbjct: 306 SLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTT 362
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSK + A ++F E+++ S+N+MISG+ QNGL E+A++LFR+M+ PN +T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+LSAC +G + G + + + E ++ + + GS+AEA L + M
Sbjct: 423 ITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 495 TFEPPPGVWGALL------GAGRTHLNL 516
T + W ++ G G+ LN+
Sbjct: 482 T-KKNEVTWNTMISGYGLHGQGQEALNI 508
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 40/265 (15%)
Query: 67 RWRDSVCSNALISGYLKVGRCE-----------EAARIFEAMVEKDVVAWGSM-----VD 110
R D V NA+I GY G E AR+ + + V G + +
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIH 342
Query: 111 GYCKKGRVI--------------------EAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
GYC K + AR++FD+ PEK++ +W AM+ GY + E
Sbjct: 343 GYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTE 402
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
D LF M++ + N +T+T + AC + G VH LV F+ I + ++I
Sbjct: 403 DAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALI 462
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----V 266
MY + G + EA ++F +M+K++ V+WN++ISGY +G+ +EA +F M V
Sbjct: 463 GMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPV 522
Query: 267 SWTTMITGFSSKGNLEKSIELFNMM 291
++ ++ S G +++ E+FN M
Sbjct: 523 TFLCVLYACSHAGLVKEGDEIFNSM 547
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 104/276 (37%), Gaps = 70/276 (25%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+ AS + +T + + I A ++F P ++ S+ AMI+G+ + G+ +A L+ M
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 65 P--------------------------ARWRDSVC-----------SNALISGYLKVGRC 87
+W + S ALI Y K G
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
EA R+F+ M +K+ V W +M+ GY G+ EA
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA-------------------------- 505
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV-HGLVSRFGFDYDIILG 206
++F M G+ +T + AC +EG ++ + ++ R+GF+ +
Sbjct: 506 -----LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLI 241
++ + GR G + A + MS S W +L+
Sbjct: 561 ACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+ +++ +Q HA ++ +D+S+ L S G + A IF ++ ++ +N +
Sbjct: 30 STSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 404 ISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACN 443
+ GF+ N +L++F + K L PN T+ +SA +
Sbjct: 90 MRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 201/642 (31%), Positives = 351/642 (54%), Gaps = 56/642 (8%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
+ALI N +++A ++F M R+ V + M+ G+V+ G A EL+ +M R
Sbjct: 185 SALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDM----RA 240
Query: 71 SVCSN--ALISGYLKVGRCEE----AARIFEAMV----EKDVVAWGSMVDGYCKKGRVIE 120
S C A ++ +L V E ++ V E +V ++V Y K + +
Sbjct: 241 SGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDD 300
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
++F MP ++V W M+ G ++ + LF M++ G+ +S+TL L A
Sbjct: 301 GWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTD 360
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ +G ++HG + R D+ L ++++ +Y + + A V+ D V +++
Sbjct: 361 LNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTM 420
Query: 241 ISGYVHNGEIEEAYRLFERM----------------P----------GKDFVSW------ 268
ISGYV NG +EA ++F + P G++ S+
Sbjct: 421 ISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY 480
Query: 269 -------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+ ++ ++ G L+ S +F+ + KD+VTW ++IS F N + EEA F E
Sbjct: 481 EGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFRE 540
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + V+ + +T+SSVLSA A+ + G +IH V+K + +D+ +++L+ +Y KCGN
Sbjct: 541 MCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGN 600
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ A+R+F ++ E+N VS+NS+I+ + GL +E+++L R M++EG + +TFL+++SA
Sbjct: 601 LEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSA 660
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C H G V+EG F+ M Y I P EH+ACMVD+ RAG L +A++LI M F+P G
Sbjct: 661 CAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAG 720
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
+WGALL A R H N++LA++A+Q L +L+P ++ YV++S++ +V G+ ++VR K
Sbjct: 721 IWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMK 780
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+++K PG SW+ + + HLF+A KS D ++I ++L++I
Sbjct: 781 DTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSI 822
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 189/431 (43%), Gaps = 44/431 (10%)
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
P R +V + +L +G + + D +V Y R +A +
Sbjct: 38 PDRRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAV 97
Query: 125 FDKMPE---KNVVAWTAMVDGYMKVDCFEDGFDLFLSM--RRGGMAFNSITLTILFEACG 179
F +P + W ++ G + +L M +S T + ++C
Sbjct: 98 FSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCA 157
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
G VH G D D+ +G+++I MY G + +A +VF M++RD V WN
Sbjct: 158 ALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNV 217
Query: 240 LISGYVHNGEIEEAYRLFERMPGKD----------FVSWT-------------------- 269
++ GYV G + A LF M F+S +
Sbjct: 218 MMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYG 277
Query: 270 ---------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
T+++ ++ L+ +LF +MP D VTW +ISG V N ++A F
Sbjct: 278 LESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFC 337
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+M + +RP+ +TL S+L A NQG ++H ++V+ + DV + ++LV +Y KC
Sbjct: 338 DMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCR 397
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
V A ++ + ++V ++MISG+ NG+ +EA+ +FR + ++G+ PN + SVL
Sbjct: 398 AVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLP 457
Query: 441 ACNHVGLVEEG 451
AC + ++ G
Sbjct: 458 ACASMAAMKLG 468
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 296/554 (53%), Gaps = 57/554 (10%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP----E 130
N LI Y K+ R ++A ++F+ M K VV+W +MV GY V A +F +M E
Sbjct: 178 NELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVE 237
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
N V WT+++ + + E+ LF MR G+ + L ++ C G +
Sbjct: 238 PNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMI 297
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG + + GF+ + N++IT+YG+ G +
Sbjct: 298 HGYMVKGGFNDYLFAKNALITLYGK-------------------------------GGGV 326
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM------PE--KDDVTWTAI 302
+A +LF M K+ VSW +I+ F+ G +K++EL + + PE + +TW+AI
Sbjct: 327 GDAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAI 386
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
I GF + EE+ F +M +V+ N +T++SVLS A A LN G ++H HV++ M
Sbjct: 387 ICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARM 446
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+ +V + N L+++Y+KCG+ + +F ++ R+ +S+NSMI+G+ +GLG++AL F
Sbjct: 447 DDNVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNH 506
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
M G P+ +TF++ LSAC+H GLV EG F M+ + IEP EHYACMVD+LGRAG
Sbjct: 507 MIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAG 566
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
+ EA ++I M EP +W +LL + R H + DLA+ AA + L +++LS+
Sbjct: 567 LVEEASNIIKGMPMEPNAYIWSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHMLLSN 626
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQT 602
+++ + D RVR+ + K ++K PG SWI +K KV++F AG T
Sbjct: 627 IFAASCRWEDSARVRISARAKGLKKVPGWSWIEVKKKVYMFKAG--------------YT 672
Query: 603 ISKGTKEFDWPKHD 616
IS+G ++ D HD
Sbjct: 673 ISEGLEKVDEILHD 686
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 162/377 (42%), Gaps = 82/377 (21%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS---MMSKRDAVSWNSLISGYV 245
QVH G + ++++Y R G + +A KVF + + WNS+I V
Sbjct: 56 QVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRANV 115
Query: 246 HNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKG--NLEKSI-------------- 285
++G EA +L+ +M D ++ ++ S+ G N+ K++
Sbjct: 116 YHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLH 175
Query: 286 -------------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
++F+ M K V+W ++SG+ N A R F +M +
Sbjct: 176 VGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEG 235
Query: 327 VRPNQLT-----------------------------------LSSVLSASAATATLNQGS 351
V PN +T L+ VLS A ATLN G
Sbjct: 236 VEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQ 295
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
IH ++VK + +N+L++LY K G V DA ++F + +N+VS+N++IS FA++G
Sbjct: 296 MIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESG 355
Query: 412 LGEEALNLFRKMKD----EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
+ ++AL L +++ + PN IT+ +++ GL EE F+ M+ L N++
Sbjct: 356 VYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVFRKMQ-LANVKAN 414
Query: 468 PEHYACMVDILGRAGSL 484
A ++ I +L
Sbjct: 415 SVTIASVLSICAMLAAL 431
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID---ERNIVSYNSM 403
+ Q+H+ V + LVS+YS+ G V DA ++F + N + +NS+
Sbjct: 51 IQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSI 110
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
I +G EAL L+ KM++ G++ + TF +L A +++G
Sbjct: 111 IRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLG 153
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 200/638 (31%), Positives = 337/638 (52%), Gaps = 49/638 (7%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNAL-ISGY 81
+F + ++ V++ A+ITG+ + G + +L+ M P ++ S NA + GY
Sbjct: 199 VFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGY 258
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
LK G+ + A + + + DV + ++D Y K GRV + +FD++ KN+++WT M+
Sbjct: 259 LKGGK-QIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIA 317
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GYM+ + +L M R G + + + +CG + G Q+H V + ++
Sbjct: 318 GYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEH 377
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D + N++I MY + +D+A +VF +++ V +N++I GY G + A +F+ M
Sbjct: 378 DNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMR 437
Query: 262 GK---------------------------------------DFVSWTTMITGFSSKGNLE 282
K D + + +I +S +
Sbjct: 438 LKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIR 497
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+ +F KD V W ++ SG+ + EEAF+ + ++ RPN+ T +++ +A++
Sbjct: 498 DARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAAS 557
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
A+L G Q H V+KM +ESD I N+LV +Y+KCG+V +A +IF++ ++ +NS
Sbjct: 558 ILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNS 617
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
MIS +AQ+G EEAL +F M + PN +TF+SVLSAC+HVG VE+G ++ SM Y
Sbjct: 618 MISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMAR-Y 676
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
IEPG EHYA +V +LGRAG L EA + I MT P VW +LL A R N++LAK A
Sbjct: 677 GIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHA 736
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
A+ + ++P + YV+LS++++ G D R+R+K + + K PG SWI + +VH+
Sbjct: 737 AEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHI 796
Query: 583 FLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
F++ K + I + L ++ K+ HD ++L
Sbjct: 797 FVSRDKVHDETDLIYLALDELTTQMKDVGCV-HDTTIL 833
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 192/388 (49%), Gaps = 49/388 (12%)
Query: 98 VEKDVVAWGSMVD---------GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
V VV WG D Y K G V +A +FDKMP +N+V+W+++V Y ++
Sbjct: 62 VHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGY 121
Query: 149 FEDGFDLFLSMRRGGM-AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
E FL +R + N L + AC + G QVH V + GF D+ +G
Sbjct: 122 NEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGT 181
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------P 261
S++ +Y + G +D+A VF + + V+W ++I+GY +G E + +LF M P
Sbjct: 182 SLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIP 241
Query: 262 GK---------------------------------DFVSWTTMITGFSSKGNLEKSIELF 288
K D ++ +I ++ G ++ LF
Sbjct: 242 DKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALF 301
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ + K+ ++WT +I+G++ N EA EM R +P++ SSVL++ + L
Sbjct: 302 DRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQ 361
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G QIH++V+K+ +E D + N+L+ +YSKC + DA R+F + ++V YN+MI G++
Sbjct: 362 HGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYS 421
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFL 436
+ G AL +F++M+ + + P+ +TF+
Sbjct: 422 RQGYLCGALEVFQEMRLKHVSPSFLTFV 449
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 139/597 (23%), Positives = 256/597 (42%), Gaps = 53/597 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCS---NALI 78
S+++A +F MP RN VS++++++ + + G +A ++ D + ++I
Sbjct: 90 SVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASII 149
Query: 79 SGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
++ E +++ +++ +DV S+V Y K G + +AR +FD + K V
Sbjct: 150 RACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPV 209
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
WTA++ GY K E LF M + + L+ + AC + G Q+H V
Sbjct: 210 TWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYV 269
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
R D+ N +I Y + G + +F + ++ +SW ++I+GY+ N EA
Sbjct: 270 LRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAV 329
Query: 255 RLFERM--------------------------PGKDFVSWT-------------TMITGF 275
L M G+ S+ +I +
Sbjct: 330 ELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMY 389
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
S L+ + +F+++ V + A+I G+ A F EM K V P+ LT
Sbjct: 390 SKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFV 449
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L SAA L QIH ++K D ++L+ +YSKC + DA +F +
Sbjct: 450 SLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNK 509
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+IV +NS+ SG+ EEA L+ ++ PN+ TF ++ +A + + + G +
Sbjct: 510 DIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFH 569
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
+ + +E P +VD+ + GS+ EA + +S ++ W +++ H
Sbjct: 570 NQVMKM-GLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWK-DTACWNSMISMYAQHGK 627
Query: 516 LDLAKLAAQHLME--LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
++ A + ++ + P+ T VLS S +G DG ++ + R PG
Sbjct: 628 VEEALRMFETMVSNNINPNYVTFVSVLSAC-SHVGFVEDG--LQHYNSMARYGIEPG 681
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 154/303 (50%), Gaps = 40/303 (13%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+VH V +G YD+ L N ++ Y ++G + +A +F M R+ VSW+S++S Y G
Sbjct: 61 KVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLG 120
Query: 249 EIEEA---YRLFERM------------------------PGKDFVSW------------- 268
E+A + F+R PG S+
Sbjct: 121 YNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVG 180
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T+++ ++ G ++K+ +F+ + K VTWTAII+G+ + + E + + F M+ +V
Sbjct: 181 TSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVI 240
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P++ LSS+L+A + L G QIHA+V++ + DVS N L+ Y+KCG V +
Sbjct: 241 PDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKAL 300
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F +D +NI+S+ +MI+G+ QN EA+ L +M G P++ SVL++C V +
Sbjct: 301 FDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDAL 360
Query: 449 EEG 451
+ G
Sbjct: 361 QHG 363
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 164/348 (47%), Gaps = 20/348 (5%)
Query: 10 NAMITALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA 66
N + ALI+ + C ++ +A +F + + V Y AMI G+ R+G A E++ M
Sbjct: 379 NFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRL 438
Query: 67 RW-RDSVCSNALISGYLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIE 120
+ S + + G C + ++ ++ K D +++D Y K + +
Sbjct: 439 KHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRD 498
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +F+ K++V W ++ GY E+ F L+ ++ N T L A
Sbjct: 499 ARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASI 558
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G Q H V + G + D + N+++ MY + G ++EA K+FS +D WNS+
Sbjct: 559 LASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSM 618
Query: 241 ISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP---- 292
IS Y +G++EEA R+FE M ++V++ ++++ S G +E ++ +N M
Sbjct: 619 ISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMARYGI 678
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
E + ++++ + EA R FIE + +RP L S+LSA
Sbjct: 679 EPGIEHYASVVTLLGRAGRLTEA-REFIE--KMTIRPAALVWRSLLSA 723
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 117/244 (47%), Gaps = 22/244 (9%)
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
++V+ L+++L A + ++ ++H VV ++ DV + N L+ Y K G+V D
Sbjct: 34 QNVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFD 93
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP-NQITFLSVLSACN 443
A +F + RN+VS++S++S + Q G E+AL F + + + N+ S++ AC
Sbjct: 94 AGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACV 153
Query: 444 HVGLVEEGFIYFKSMKTLYNIEP--GPEHY--ACMVDILGRAGSLAEAIDLINSMTFEPP 499
E G S Y I+ G + Y +V + + G + +A + + + + P
Sbjct: 154 QRDGGEPG-----SQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTP 208
Query: 500 PGVWGALLG----AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL--YSVIGKKRDG 553
W A++ +GR+ ++L L L + + PD YV+ S L SV+G + G
Sbjct: 209 V-TWTAIITGYTKSGRSEVSLQLFNLMMES--NVIPDK---YVLSSILNACSVLGYLKGG 262
Query: 554 NRVR 557
++
Sbjct: 263 KQIH 266
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 201/627 (32%), Positives = 320/627 (51%), Gaps = 52/627 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALIS 79
A +F +P + + + +I + G F A +LY +M P ++ A S
Sbjct: 62 ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKA-CS 120
Query: 80 GYLKVG---RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
G L + A++F +E DV ++VD Y K G ++EA+ +F M ++VVAW
Sbjct: 121 GLLAIEDGVEIHSHAKMFG--LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAW 178
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
AM+ G +D L + M+ G+ NS T+ + G G +HG R
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVR 238
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
FD +++G ++ MY + + A K+F +M R+ VSW+++I GYV + ++EA L
Sbjct: 239 RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALEL 298
Query: 257 FERMPGKDFVSWT----------------------------------------TMITGFS 276
F++M KD + T T+++ ++
Sbjct: 299 FDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYA 358
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G ++ +I F+ M KD V+++AI+SG V N A F M + P+ T+
Sbjct: 359 KCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
VL A + A L G H +++ +D I N+L+ +YSKCG + A +F +D +
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHD 478
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
IVS+N+MI G+ +GLG EAL LF + GL P+ ITF+ +LS+C+H GLV EG ++F
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
+M ++I P EH CMVDILGRAG + EA I +M FEP +W ALL A R H N+
Sbjct: 539 AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNI 598
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+L + ++ + L P+S +V+LS++YS G+ D +R+ +K ++K PGCSWI +
Sbjct: 599 ELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEI 658
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTI 603
VH F+ G +S L L +I L+ +
Sbjct: 659 NGIVHAFVGGDQSHLQLSQINRKLEEL 685
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 140/558 (25%), Positives = 256/558 (45%), Gaps = 85/558 (15%)
Query: 33 MPMRNAV--SYAAMITGFVRRGMFYEAEELYVNMPARWR--DSVCSNALISGYLKVGRCE 88
MP+R V +Y ++ ++ EA++++ + DS + L YL +
Sbjct: 1 MPLRFEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVV 60
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
A R+F+ + V+ W ++ Y AW DG
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAY----------------------AWNGPFDG------ 92
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
DL+ SM G+ N T + +AC +GV++H FG + D+ + +
Sbjct: 93 ---AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTA 149
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSW 268
++ Y + G + EA ++FS MS RD V+WN++I+G G ++A +L +M +
Sbjct: 150 LVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPN 209
Query: 269 TTMITGFSSKGNLEKSI---------------------------------------ELFN 289
++ I G K++ ++F+
Sbjct: 210 SSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFD 269
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLN 348
+M +++V+W+A+I G+V ++ +EA F +M+ KD + P +TL SVL A A L+
Sbjct: 270 VMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLS 329
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+G ++H +++K+ D+ + N+L+S+Y+KCG + DA R F ++ ++ VS+++++SG
Sbjct: 330 RGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCV 389
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG- 467
QNG AL++FR M+ G+ P+ T L VL AC+H+ ++ GF Y I G
Sbjct: 390 QNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHG-----YLIVRGF 444
Query: 468 -PEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
+ C ++D+ + G ++ A ++ N M ++G G L ++ L
Sbjct: 445 ATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHD 504
Query: 525 HL-MELEPDSATPYVVLS 541
L + L+PD T +LS
Sbjct: 505 LLALGLKPDDITFICLLS 522
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 209/664 (31%), Positives = 325/664 (48%), Gaps = 118/664 (17%)
Query: 2 ADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
ADRT N ++ L + + + EA ++F MP R+ ++ MI + +AE+L+
Sbjct: 24 ADRTKLHSNLLLGDL-SKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLF 82
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM------------------------ 97
+ P + +++ NALISGY K G EA +F M
Sbjct: 83 RSNPVK--NTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVL 140
Query: 98 ---------------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAWTAMVD 141
+ DV ++ Y + R+ EA +F+ M EKN V WT+M+
Sbjct: 141 LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY + + F +RR G N T + AC R GVQVH + + GF
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+I + +++I MY + M+ A + M D VSWNS+I G V G I EA +F RM
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 262 GKDF---------------VSWTTMI-----------TGFSS--------------KGNL 281
+D +S T M TG+++ +G +
Sbjct: 321 ERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIM 380
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ ++++F M EKD ++WTA+++G +N Y+EA + F M + P+++ +SVLSAS
Sbjct: 381 DSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSAS 440
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
A L G Q+H + +K S +S+ NSLV++Y+KCG++ DA IF +++ R+++++
Sbjct: 441 AELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWT 500
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+I G+A+NGL E+A YF SM+T+
Sbjct: 501 CLIVGYAKNGLLEDAQR-----------------------------------YFDSMRTV 525
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I PGPEHYACM+D+ GR+G + L++ M EP VW A+L A R H N++ +
Sbjct: 526 YGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGER 585
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA+ LMELEP++A PYV LS++YS G++ + VR K + I K PGCSW+ K KVH
Sbjct: 586 AAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVH 645
Query: 582 LFLA 585
F++
Sbjct: 646 SFMS 649
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 195/621 (31%), Positives = 327/621 (52%), Gaps = 51/621 (8%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------ 64
T+LI+ N I A +F + + AV++ +I G+ + G + EL+ M
Sbjct: 76 TSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVV 135
Query: 65 PARWR-DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
P R+ SV S + +L+ G+ + A + E DV ++D Y K RV R+
Sbjct: 136 PDRYVVSSVLSACSMLEFLEGGK-QIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRK 194
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD+M KN+++WT M+ GYM+ + LF M R G + T + +CG
Sbjct: 195 LFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEA 254
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+G QVH + + + + N +I MY + + +A KVF +M++++ +S+N++I G
Sbjct: 255 LEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEG 314
Query: 244 YVHNGEIEEAYRLFERMPGK---------------------------------------D 264
Y ++ EA LF M + D
Sbjct: 315 YSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLD 374
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+ + +I +S ++ + +F M EKD V W A+ G+ + + EEA + + +
Sbjct: 375 LFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQF 434
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+PN+ T +++++A++ A+L G Q H +VKM ++ + N+LV +Y+KCG++ +
Sbjct: 435 SRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEE 494
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A ++F + R++V +NSMIS AQ+G EEAL +FR+M EG+ PN +TF++VLSAC+H
Sbjct: 495 ARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSH 554
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
G VE+G +F SM + I+PG EHYAC+V +LGR+G L EA + I M EP VW
Sbjct: 555 AGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWR 613
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
+LL A R N++L K AA+ + +P + Y++LS++++ G D +VR +
Sbjct: 614 SLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSE 673
Query: 565 IRKSPGCSWIILKDKVHLFLA 585
+ K PG SWI + +KV++F+A
Sbjct: 674 VVKEPGRSWIEVNNKVNVFIA 694
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 143/556 (25%), Positives = 251/556 (45%), Gaps = 88/556 (15%)
Query: 39 VSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMV 98
V A + GFV R F +++YV +LI Y K G E A +F+ ++
Sbjct: 53 VEKGAQLHGFVVRSGF--DQDVYVG-----------TSLIDFYSKNGBIEVARLVFDQLL 99
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
EK V W +++ GY K GR + E+F +M E NVV D Y+
Sbjct: 100 EKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVP-----DRYV-------------- 140
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
++ + AC G Q+H V R G + D+ + N +I Y +
Sbjct: 141 ------------VSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 188
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMIT- 273
+ K+F M ++ +SW ++ISGY+ N EA +LF M D + T+++T
Sbjct: 189 VKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTS 248
Query: 274 --------------GFSSKGNLEK--------------------SIELFNMMPEKDDVTW 299
++ K NLE + ++F++M E++ +++
Sbjct: 249 CGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISY 308
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
A+I G+ + E+ EA F EM + P+ LT S+L SA+ L QIH ++K
Sbjct: 309 NAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIK 368
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ D+ ++L+ +YSKC V DA +F ++E++IV +N+M G+ Q+ EEAL L
Sbjct: 369 XGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKL 428
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
+ ++ PN+ TF ++++A +++ + G + + + ++ P +VD+
Sbjct: 429 YSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM-GLDFCPFVTNALVDMYA 487
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPY 537
+ GS+ EA + NS + W +++ H + A + +M+ ++P+ T
Sbjct: 488 KCGSIEEARKMFNSSIWRDVV-CWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFV 546
Query: 538 VVLSDLYSVIGKKRDG 553
VLS S G DG
Sbjct: 547 AVLSAC-SHAGXVEDG 561
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 169/330 (51%), Gaps = 40/330 (12%)
Query: 150 EDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
E+ +F+ + R+ G N L + AC + +G Q+HG V R GFD D+ +G S
Sbjct: 18 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 77
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------- 260
+I Y + G ++ A VF + ++ AV+W ++I+GY G + LF +M
Sbjct: 78 LIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPD 137
Query: 261 ------------------PGKDF------------VSWTTMITGFSSKGNLEKS-IELFN 289
GK VS ++ F +K N K+ +LF+
Sbjct: 138 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
M K+ ++WT +ISG++ N EA + F EM R +P+ +SVL++ + L Q
Sbjct: 198 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQ 257
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G Q+HA+ +K N+ES+ ++N L+ +Y+K + DA ++F + E+N++SYN+MI G++
Sbjct: 258 GRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSS 317
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
EAL LF +M+ P+ +TF+S+L
Sbjct: 318 QEKLSEALELFHEMRVRLFPPSLLTFVSLL 347
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 167/346 (48%), Gaps = 42/346 (12%)
Query: 217 GFMDEANKVFSMMSKRDAVSWN-----SLISGYVHNGEIEEAYRL--FERMPG--KDFVS 267
G+ +EA VF + ++ N S+I G +E+ +L F G +D
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T++I +S GB+E + +F+ + EK VTWT II+G+ + + F +M +V
Sbjct: 75 GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P++ +SSVLSA + L G QIHA+V++ E DVS+ N L+ Y+KC V +
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRK 194
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + +NI+S+ +MISG+ QN EA+ LF +M G P+ SVL++C +
Sbjct: 195 LFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEA 254
Query: 448 VEEG----------------FI-------YFKS-----MKTLYNI--EPGPEHYACMVDI 477
+E+G F+ Y KS K ++++ E Y M++
Sbjct: 255 LEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEG 314
Query: 478 LGRAGSLAEAIDLINSM---TFEPPPGVWGALLGAGRTHLNLDLAK 520
L+EA++L + M F P + +LLG + L+L+K
Sbjct: 315 YSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSK 360
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 198/642 (30%), Positives = 324/642 (50%), Gaps = 50/642 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVNMPARWRDSVCSNALI 78
A ++F MP +N V++ ++ G+ +RG +F EL V +V
Sbjct: 267 ASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCAN 326
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
S LK G+ + I + + G +VD Y K G I+A +F + + ++V W+A
Sbjct: 327 SKNLKQGQVIHSLIIKCGYEGNEFIGCG-LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSA 385
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ + E+ LF MR G N T+ L A + G +H V ++G
Sbjct: 386 LITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYG 445
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY-------------- 244
F+ D+ + N+++TMY + G + + K++ M RD +SWN+ +SG
Sbjct: 446 FETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFY 505
Query: 245 --------------------------VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
VH G A+ + ++ +FV T +I ++
Sbjct: 506 HMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVC-TALIDMYAKC 564
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
LE + FN + +D TWT II+ + Q E+A +F +M ++ V+PN+ TL+ L
Sbjct: 565 MYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCL 624
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
S ++ A+L G Q+H+ V K SD+ + ++LV +Y+KCG + +A +F + R+ +
Sbjct: 625 SGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTI 684
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++N++I G+AQNG G +AL FR M DEG+ P+ +TF +LSAC+H GLVEEG +F SM
Sbjct: 685 AWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSM 744
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+ I P +H ACMVDILGR G E D I M +W +LGA + H NL L
Sbjct: 745 YRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVL 804
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+ AA L EL+P+ + Y++LS++++ G+ D RVR K ++K PGCSW+
Sbjct: 805 GEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANG 864
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSL 619
+VH F++ S ++EI + L + + + PK ++ L
Sbjct: 865 QVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVL 906
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 202/397 (50%), Gaps = 44/397 (11%)
Query: 91 ARIFEAMVEKDVV-----AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
A+ ++ KDV+ W S+V+ Y K AR + KMP+++VV+WTA++ G +
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
D LF M+ G+ N TL +AC G Q+H + G D+ +
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
G++++ +Y + G ++ A+K+F M +++ V+WN L++GY G++ +LF M D
Sbjct: 251 GSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDV 310
Query: 266 ----VSWTTMITGFSSKGNLEK-----------------------------------SIE 286
+ TT++ G ++ NL++ +I
Sbjct: 311 KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIG 370
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+F + + D V W+A+I+ Q EE+ + F M D PNQ T+ S+LSA+ T
Sbjct: 371 VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGN 430
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L G IHA V K E+DV++ N+LV++Y K G V D +++ ++ +R+++S+N+ +SG
Sbjct: 431 LQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSG 490
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
G+ + L +F M +EG +PN TF+S+L +C+
Sbjct: 491 LHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 237/520 (45%), Gaps = 64/520 (12%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN--ALISGYLKVGR 86
+ A MP R+ VS+ A+I G V G ++ L+ M + + N L +G
Sbjct: 169 VLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ---NEGIMPNEFTLATGLKACSL 225
Query: 87 C-------EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
C + A+ F+ + D+ ++VD Y K G + A ++F MPE+N V W +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
++GY + LF SM + N TLT + + C ++G +H L+ + G+
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY 345
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ + +G ++ MY + G +A VF + K D V W++LI+ G+ EE+ +LF
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 260 M------PGK---------------------------------DFVSWTTMITGFSSKGN 280
M P + D ++T + G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+ +L+ M ++D ++W A +SG + Y+ F ML + PN T S+L +
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+ ++ G Q+HAH++K ++ + + +L+ +Y+KC + DA F + R++ ++
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTW 585
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
+I+ +AQ GE+ALN FR+M+ EG+ PN+ T LS C+ + +E G +
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG-------QQ 638
Query: 461 LYNIEPGPEHYACM------VDILGRAGSLAEAIDLINSM 494
L+++ H + M VD+ + G + EA L ++
Sbjct: 639 LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL 678
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 179/379 (47%), Gaps = 25/379 (6%)
Query: 7 ASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-- 64
A NA++T + N C +++ +++ +M R+ +S+ A ++G GM+ ++ +M
Sbjct: 451 AVSNALVTMYMKNGC-VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLE 509
Query: 65 ----PARWR-DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
P + S+ + + GR + A I + ++ + +++D Y K +
Sbjct: 510 EGFIPNMYTFISILGSCSCLFDVHYGR-QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLE 568
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+A F+++ +++ WT ++ Y + + E + F M++ G+ N TL C
Sbjct: 569 DADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCS 628
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
G Q+H +V + G D+ +G++++ MY + G M+EA +F + +RD ++WN+
Sbjct: 629 SLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNT 688
Query: 240 LISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM---- 291
+I GY NG+ +A F M + D V++T +++ S +G +E+ E FN M
Sbjct: 689 IICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDF 748
Query: 292 ---PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
P D I G V +++E FI+ ++ + N L +VL AS L
Sbjct: 749 GISPTVDHCACMVDILGRVG--KFDE-LEDFIQKMQ--LSQNALIWETVLGASKMHNNLV 803
Query: 349 QGSQIHAHVVKMNMESDVS 367
G + + ++ E + S
Sbjct: 804 LGEKAANKLFELQPEEESS 822
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 144/317 (45%), Gaps = 46/317 (14%)
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
D+ W SL++ Y A + +MP +D VSWT +I G ++G SI LF
Sbjct: 146 DSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQ--- 202
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
EM + + PN+ TL++ L A + L+ G Q
Sbjct: 203 ----------------------------EMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+HA K+ + D+ + ++LV LY+KCG + A ++F + E+N V++N +++G+AQ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSAC-NHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
L LF M + + N+ T +VL C N L + I+ +K Y G E
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYE---GNEFI 351
Query: 472 AC-MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHL 526
C +VD+ + G +AI + ++ +P VW AL+ G++ ++ L HL
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSEESIKLF-----HL 405
Query: 527 MELEPDSATPYVVLSDL 543
M L Y + S L
Sbjct: 406 MRLGDTLPNQYTICSLL 422
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 63/109 (57%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
SS+L A+ +L IH +VK + D + SLV++Y+KC A + + +
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
R++VS+ ++I G G +++ LF++M++EG++PN+ T + L AC+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACS 224
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 202/643 (31%), Positives = 346/643 (53%), Gaps = 58/643 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN--ALISGYLK 83
A + F +P R+ V + M+ G ++ G A L+ NM R S C A ++ +L
Sbjct: 195 ARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNM----RASGCEPNFATLACFLS 250
Query: 84 VGRCEEAARIFEAM----------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
V C A + +E +V +++ Y K + +A +F+ MP+ ++
Sbjct: 251 V--CATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDL 308
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V W M+ G ++ F + F LF M+R G +SITL L A ++G +VHG
Sbjct: 309 VTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGY 368
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ R + D+ L ++++ +Y + + A ++ D V +++ISGYV NG EEA
Sbjct: 369 IVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEA 428
Query: 254 YRLF----ERMPGKDFVSWTTMITGFSSK------------------------------- 278
++F E+ + V+ +++ G +S
Sbjct: 429 LQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDM 488
Query: 279 ----GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
G L+ S +F M +KD+VTW ++IS F N + +EA F +M + ++ N +T+
Sbjct: 489 YAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITI 548
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S+ LSA A+ + G +IH +K +++D+ +++L+ +Y+KCGN+ A R+F + +
Sbjct: 549 SAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPD 608
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+N VS+NS+IS + +GL +E+++L M++EG P+ +TFL+++SAC H GLVEEG
Sbjct: 609 KNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQL 668
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F+ M Y I P EH+ACMVD+ R+G L +AI I M F+P G+WGALL A R H
Sbjct: 669 FQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHR 728
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
N++LA +A+Q L +L+P ++ YV++S++ +V G+ ++VR K +I K PG SW+
Sbjct: 729 NVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWV 788
Query: 575 ILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHD 616
+ + HLF+A KS + ++I +L+T+ + +E + P+ D
Sbjct: 789 DVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYVPRPD 831
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 224/470 (47%), Gaps = 54/470 (11%)
Query: 25 EAFEIFATMPMRNAVSYAA---MITGFVRRGMFYEAEELYVNM---------PARWRDSV 72
+A +F+ +P A S +I GF G + A YV M A V
Sbjct: 88 DAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYV 147
Query: 73 CSNALISGYLKVGR-CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
+ G + +GR AR + DV ++V Y G + AR+ FD +PE+
Sbjct: 148 VKSCAALGAMSLGRLVHRTARAIG--LANDVYVGSALVKMYADAGLLGNARDAFDGIPER 205
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+ V W M+DG +K + LF +MR G N TL C G Q+H
Sbjct: 206 DCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLH 265
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
L + G + ++ + N+++ MY + +D+A ++F +M + D V+WN +ISG V NG
Sbjct: 266 SLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFV 325
Query: 252 EAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIE--------------------- 286
EA+ LF M D ++ +++ + L++ E
Sbjct: 326 EAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALV 385
Query: 287 --------------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
L++ D V + +ISG+V N EEA + F +L + ++PN +
Sbjct: 386 DIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAV 445
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T++SVL A+ A L G QIH +V++ E ++++L+ +Y+KCG + ++ IF +
Sbjct: 446 TIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKM 505
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+++ V++NSMIS F+QNG +EAL+LFR+M EG+ N IT + LSAC
Sbjct: 506 SQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSAC 555
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 145/312 (46%), Gaps = 47/312 (15%)
Query: 187 GVQVHG--LVSRFGFDYD-IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS---WNSL 240
G+Q+H +VS D++ + L ++ MY +A VFS + + A S WN L
Sbjct: 51 GLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWL 110
Query: 241 ISGYVHNGEIEEAYRLFERM------PGKD---------------------FVSWTTMIT 273
I G+ G+ A + +M P D V T
Sbjct: 111 IRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAI 170
Query: 274 G--------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
G ++ G L + + F+ +PE+D V W ++ G + + A R F
Sbjct: 171 GLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLF 230
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
M PN TL+ LS A A L G+Q+H+ VK +E +V++ N+L+++Y+KC
Sbjct: 231 RNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKC 290
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ DA+R+F + + ++V++N MISG QNGL EA LF M+ G P+ IT +S+L
Sbjct: 291 QCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLL 350
Query: 440 SACNHVGLVEEG 451
A + +++G
Sbjct: 351 PALTDLNGLKQG 362
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M+ + ++N+MI++ + N EA ++F M M N ++ +A ++ Y
Sbjct: 505 MSQKDEVTWNSMISSF-SQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYY 563
Query: 57 AEELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+E++ + P + D +ALI Y K G E A R+FE M +K+ V+W S++ Y
Sbjct: 564 GKEIHGVTIKGPIK-ADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYG 622
Query: 114 KKGRVIEAREIFDKMPEK----NVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
G V E+ + M E+ + V + A++ E+G LF M +
Sbjct: 623 AHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTK 674
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 280/485 (57%), Gaps = 6/485 (1%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD + + NV W M+ ++ + L+ M N T + +AC
Sbjct: 93 VFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGV 152
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS-MMSKRDAVSWNSLIS 242
EGVQVH + + G D + +S I MY G + EA ++ + DAV WN++I
Sbjct: 153 VAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMID 212
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVS-WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
GY+ GE+E A LFE MP + +S W MI+GFS G +E + E F+ M E+D+++W+A
Sbjct: 213 GYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSA 272
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+I G++ + EA F +M ++ +RP + L SVLSA A L+QG IH + + +
Sbjct: 273 MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNS 332
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
++ D + SLV +Y+KCG + A+ +F + + + S+N+MI G A +G E+A++LF
Sbjct: 333 IQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFS 392
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
KM + PN+ITF+ VL+AC H GLV++G F SM+ Y +EP EHY C+VD+LGRA
Sbjct: 393 KMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRA 449
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L EA +++S+ EP P VWGALLGA R H N++L + + L+ELEP ++ Y +LS
Sbjct: 450 GLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLS 509
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL-KDKVHLFLAGRKSCLDLKEIEVTL 600
++Y+ G+ + VR K + I+ +PG S I L + +VH F+ G S +K+I L
Sbjct: 510 NIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQML 569
Query: 601 QTISK 605
+ +
Sbjct: 570 DKVKE 574
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 177/364 (48%), Gaps = 38/364 (10%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA-WGSMVDGYCKKGRVIEAREIFDKM 128
D+VC NA+I GYL+ G E A +FE M ++ +++ W +M+ G+ + G V ARE FD+M
Sbjct: 203 DAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEM 262
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
E++ ++W+AM+DGY++ CF + ++F M++ + L + AC +G
Sbjct: 263 KERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGR 322
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+H R D +LG S++ MY + G +D A +VF MS ++ SWN++I G +G
Sbjct: 323 WIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHG 382
Query: 249 EIEEAYRLFERMP-GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
E+A LF +M + +++ ++ + G ++K + +FN M ++ V
Sbjct: 383 RAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGV---------- 432
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
E E + +++L R LT + + +S T E +
Sbjct: 433 --EPQIEHYGCIVDLLG---RAGLLTEAEKVVSSIPT------------------EPTPA 469
Query: 368 IQNSLVSLYSKCGNVVDAYR---IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
+ +L+ K GNV R I ++ +N Y + + +A+ G EE + + MK
Sbjct: 470 VWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMK 529
Query: 425 DEGL 428
+ G+
Sbjct: 530 ERGI 533
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+ E S+ +F+ + + + W +I + N + +A + EM+ RPN+ T +VL
Sbjct: 86 SFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLK 145
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIV 398
A + + +G Q+HAH+VK + D I +S + +Y+ G +V+A RI + E + V
Sbjct: 146 ACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAV 205
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
+N+MI G+ + G E A LF M D ++ +S S C G+VE +F M
Sbjct: 206 CWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRC---GMVEVAREFFDEM 262
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
K I ++ M+D + G EA+++ + M E
Sbjct: 263 KERDEIS-----WSAMIDGYIQEGCFMEALEIFHQMQKE 296
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG-----NVVDAYRIFTNIDER 395
+ T +L+ Q HA +++ D I SLV Y+ + + R+F + +
Sbjct: 41 TQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKP 100
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
N+ +N MI +N +A+ L+ +M PN+ T+ +VL AC+ G+V EG
Sbjct: 101 NVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEG 156
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 210/632 (33%), Positives = 336/632 (53%), Gaps = 75/632 (11%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNA----- 76
SI A IF M RN VS +I G VR+ EA EL++ M +DSV N
Sbjct: 334 SIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM----KDSVELNPNSYMI 389
Query: 77 LISGYLKVGRCEEAAR---------IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
+++ + + E R I ++ + +++ Y K G + +A +F
Sbjct: 390 ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRL 449
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
M K+ V W +M+ G + F + F MRR + ++ T+ +C G
Sbjct: 450 MDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVG 509
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
Q+H + G D D+ + N+++ +YG G++ E K FS+M D VSWNSLI +
Sbjct: 510 EQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADS 569
Query: 248 G----EIEEAYRLFERM---PGKDFVSWTTMITGFSS---------------KGNL--EK 283
E E++ + R P + V++ T++ SS K N+ +
Sbjct: 570 EPSMLEAVESFLVMMRAGWDPNR--VTFITILAAVSSLSLHELGKQIHALVLKRNVAADT 627
Query: 284 SIE------------------LFNMMPEK-DDVTWTAIISGFVNNEQYEEAFR--WFIEM 322
+IE +F+ M ++ D+V+W ++ISG+++NE +A WF M
Sbjct: 628 AIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWF--M 685
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
++K R + T ++VLSA A ATL +G ++H V+ +ESD+ I ++LV +Y+KCG +
Sbjct: 686 MQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRI 745
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A R F + RN+ S+NSMISG+A++G G ++L+LF +MK +G +P+ +TF+ VLSAC
Sbjct: 746 DYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSAC 805
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLV EGF +F SM +Y + P EH++CMVD+LGR G L + D +N M +P +
Sbjct: 806 SHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLI 865
Query: 503 WGALLGA-----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
W +LGA GR N L + AA+ L+E+EP +A Y++LS++Y+ GK D + R
Sbjct: 866 WRTVLGACCRANGR---NTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTR 922
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ + ++K GCSW+ +KD VH+F+AG KS
Sbjct: 923 VAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKS 954
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 157/602 (26%), Positives = 271/602 (45%), Gaps = 103/602 (17%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMR--------NAVSYAAMITG---FVRRG 52
R S N+MI+ ++ AF+IF+TM N ++ ++I+ G
Sbjct: 241 RNLVSLNSMISVYCQRGDAV-SAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSG 299
Query: 53 MFYEAEELY-VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
+ + L V D +AL+SG+ K G A IF+ M ++VV+ ++ G
Sbjct: 300 LVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIG 359
Query: 112 YCKKGRVIEAREIFDKMP---EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
++ R EA E+F +M E N ++ ++ + + E+G
Sbjct: 360 LVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENG---------------- 403
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMDEANKVFS 227
R+G +VH + R G + I +GN +I MY + G +++A VF
Sbjct: 404 ---------------KRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR 448
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD-FVSWTTMITGFSSKGNL----- 281
+M +D+V+WNS+I+G N + EA + F+ M + + S TMI+ SS +L
Sbjct: 449 LMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISV 508
Query: 282 ---------------------------------EKSIELFNMMPEKDDVTWTAIISGFVN 308
++ + F++M + D V+W ++I +
Sbjct: 509 GEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALAD 568
Query: 309 NE-QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
+E EA F+ M+R PN++T ++L+A ++ + G QIHA V+K N+ +D +
Sbjct: 569 SEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTA 628
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
I+N+L++ Y KCG++ IF+ + D ++ VS+NSMISG+ N L +A+++ M +
Sbjct: 629 IENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQK 688
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
G + TF +VLSAC V +E G ++ S++ +E + +VD+ + G +
Sbjct: 689 GQRLDGFTFATVLSACATVATLERGMEVHGCSVRAC--LESDIVIGSALVDMYAKCGRID 746
Query: 486 EAIDLINSMTFEPPPG----VWGALLG--AGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
A S FE P W +++ A H L A L PD T V
Sbjct: 747 YA-----SRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGV 801
Query: 540 LS 541
LS
Sbjct: 802 LS 803
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 231/491 (47%), Gaps = 75/491 (15%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRC 87
++F MP+RN VS++ +I+G+ R M EA EL+ M + D N G + + C
Sbjct: 129 KVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVS---DGFMPNHYAFGSV-IRAC 184
Query: 88 EEAARI-------FEAMVEK-----DVVAWGSMVDGYCKK-GRVIEAREIFDKMPEKNVV 134
+E ++ K DV A ++ Y G V AR FD + +N+V
Sbjct: 185 QECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLV 244
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRR----GGMAFNSITLTILFEACGRFFRYREGV-- 188
+ +M+ Y + FD+F +M++ G+ N T L A G+
Sbjct: 245 SLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSL--ANSGLVL 302
Query: 189 --QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
Q+ V + GF +D+ +G+++++ + + G + A +F MS R+ VS N LI G V
Sbjct: 303 LEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVR 362
Query: 247 NGEIEEAYRLFERMPGKDFV-----SWTTMITGF-------------------------- 275
EEA LF M KD V S+ ++T F
Sbjct: 363 QKRGEEAVELFMEM--KDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLL 420
Query: 276 --------------SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+ G + + +F +M KD VTW ++I+G N+Q+ EA + F E
Sbjct: 421 NAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQE 480
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M R ++ P+ T+ S LS+ A+ ++ G Q+H +K+ ++ DVS+ N+L++LY +CG
Sbjct: 481 MRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGY 540
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE-EALNLFRKMKDEGLVPNQITFLSVLS 440
V + + F+ + + + VS+NS+I A + EA+ F M G PN++TF+++L+
Sbjct: 541 VKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILA 600
Query: 441 ACNHVGLVEEG 451
A + + L E G
Sbjct: 601 AVSSLSLHELG 611
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 200/413 (48%), Gaps = 54/413 (13%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
++F+ D+ ++++ Y + G + R++FD+MP +N+V+W+ ++ GY + +
Sbjct: 98 QLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNE 157
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRY--REGVQVHGLVSRFGFDYDIILGNSI 209
+LF M G N + AC Y + G+Q+HGL+S+ + D+ N +
Sbjct: 158 ACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVL 217
Query: 210 ITMYGR-LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----- 263
I+MYG LG +D A + F + R+ VS NS+IS Y G+ A+ +F M +
Sbjct: 218 ISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDG 277
Query: 264 ----------------------------------------DFVSWTTMITGFSSKGNLEK 283
D + +++GF+ G++
Sbjct: 278 LKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGY 337
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ +F M ++ V+ +I G V ++ EEA F+EM + V N + +L+A
Sbjct: 338 AKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYMIILTAFPE 396
Query: 344 TATLN----QGSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
L +GS++HA +++ + + ++I N L+++Y+KCG + DA +F +D ++ V
Sbjct: 397 FHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSV 456
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++NSMI+G QN EA+ F++M+ L P+ T +S LS+C +G + G
Sbjct: 457 TWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVG 509
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 176/400 (44%), Gaps = 57/400 (14%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR-----NAVSYAAMITGFVRRGMFY 55
M D S+N++I AL ++ S+ EA E F M MR N V++ ++ +
Sbjct: 551 MLDYDHVSWNSLIGALADSEPSMLEAVESFLVM-MRAGWDPNRVTFITILAAVSSLSLHE 609
Query: 56 EAEELYVNMPAR--WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
++++ + R D+ NAL++ Y G+C G M GYC
Sbjct: 610 LGKQIHALVLKRNVAADTAIENALLACY---GKC------------------GDM--GYC 646
Query: 114 KKGRVIEAREIFDKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
+ IF +M ++ + V+W +M+ GY+ + D+ M + G + T
Sbjct: 647 EN--------IFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFA 698
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ AC G++VHG R + DI++G++++ MY + G +D A++ F MM R
Sbjct: 699 TVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR 758
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKG-------NL 281
+ SWNS+ISGY +G ++ LF +M P D V++ +++ S G +
Sbjct: 759 NLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHF 818
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ E++ + P + + + G V E F + + V+PN L +VL A
Sbjct: 819 DSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDF-----LNQMPVKPNVLIWRTVLGAC 873
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCG 380
N A + + ME ++ L+S +Y+ G
Sbjct: 874 CRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGG 913
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 152/331 (45%), Gaps = 59/331 (17%)
Query: 176 EACGRFFRY----REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
E+ + +RY ++ ++H + + GF D+ L N++I +Y R+G + KVF M
Sbjct: 77 ESLAQRYRYSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPL 136
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF---------------------VSWTT 270
R+ VSW+ LISGY N EA LF +M F + +
Sbjct: 137 RNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGM 196
Query: 271 MITGFSSK---------------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
I G SK G ++ + F+ + ++ V+ ++IS +
Sbjct: 197 QIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQR 256
Query: 310 EQYEEAFRWFIEMLRK----DVRPNQLTLSSVLSASAATATLNQG----SQIHAHVVKMN 361
AF F M ++ ++PN+ T S++SA+ + A N G Q+ V K
Sbjct: 257 GDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLA--NSGLVLLEQLLTRVEKSG 314
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
D+ + ++LVS ++K G++ A IF + RN+VS N +I G + GEEA+ LF
Sbjct: 315 FLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFM 374
Query: 422 KMKDE-GLVPNQITFLSVLSACNHVGLVEEG 451
+MKD L PN +++ +L+A ++E G
Sbjct: 375 EMKDSVELNPN--SYMIILTAFPEFHVLENG 403
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 199/609 (32%), Positives = 317/609 (52%), Gaps = 73/609 (11%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-- 65
SYN MI+ + + Y A E+F MP++ VSY MI GF + + +A EL+ M
Sbjct: 134 SYNVMISGYVKSGQLDY-ACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNV 192
Query: 66 ARWRDSVCSNALISGYLKVG---RCE--------------------------------EA 90
+ V L+S Y G C EA
Sbjct: 193 GVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEA 252
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+F+ M EK++V+W M++GY K G V AR +F+++P K++V W ++DGY++V+
Sbjct: 253 RALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERIN 312
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD-YDIILGNSI 209
+ ++ SM G N + + L CGR EG Q+ V + GFD YD I ++I
Sbjct: 313 EALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFI-QSTI 371
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
I +Y G ++EA F + SK ++ SW
Sbjct: 372 IHLYAACGRINEACLQFRIGSK-------------------------------ENVASWN 400
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+I G+ +++++ELFN MPE+D +W+ +ISG+ NEQ A F +M+ ++P
Sbjct: 401 ALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKP 460
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N++T+ SVLSA A + TL +G H +V ++ ++ +++ +Y+KCG++ +A +F
Sbjct: 461 NEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVF 520
Query: 390 TNIDER--NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
I E+ + +N++I G A +G +L +F ++ + N ITF+ VL+AC HVGL
Sbjct: 521 YEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGL 580
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
VE G +F SMK+ ++I+P +HY CMVD+LGRAG L EA ++I SM + +WG LL
Sbjct: 581 VESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLL 640
Query: 508 GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRK 567
A RTH N+D+ + AA++L LEP V+LS++Y+ GK D VR + R+++
Sbjct: 641 AACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRAMQSHRMQR 700
Query: 568 SPGCSWIIL 576
PG S + L
Sbjct: 701 LPGYSGVAL 709
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 231/487 (47%), Gaps = 84/487 (17%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+LI+ Y K G +A IF+ D V++ M+ GY K G++ A E+FD+MP K V
Sbjct: 105 NSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCV 164
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
++T M+ G+ + +C+ +LF MR G+ N +T+ L A F +HGLV
Sbjct: 165 SYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLV 224
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ F+ +++ +++ MY + EA +F M +++ VSWN +++GY G ++ A
Sbjct: 225 IKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSAR 284
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
+FER+P KD V+W T II G+V E+ E
Sbjct: 285 VVFERIPNKDLVTWGT-------------------------------IIDGYVRVERINE 313
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A + M+ PN + + ++S T + +G Q+ + VVKM + IQ++++
Sbjct: 314 ALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIH 373
Query: 375 LYSKCGNVVDA---YRI----------------------------FTNIDERNIVSYNSM 403
LY+ CG + +A +RI F + ER++ S+++M
Sbjct: 374 LYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTM 433
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-----FIYFKSM 458
ISG+ QN AL LF KM G+ PN++T +SVLSA G ++EG +++ S+
Sbjct: 434 ISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSI 493
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI-----NSMTFEPPPGVWGALLG--AGR 511
N+ A ++D+ + GS+ A+++ + T P W A++ A
Sbjct: 494 TVSDNLS------AAIIDMYAKCGSINNALEVFYEIREKASTVSP----WNAIICGLAVH 543
Query: 512 THLNLDL 518
H NL L
Sbjct: 544 GHANLSL 550
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 166/341 (48%), Gaps = 37/341 (10%)
Query: 156 FLSMRRGGMAFN-SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
L+ + G FN + L + C +G Q+H LVS+ G + + NS+I MYG
Sbjct: 53 LLNPKTGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYG 112
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
+ G + +A +F+ P D VS+ MI+G
Sbjct: 113 KCGLLVDAKS-------------------------------IFDVCPRSDPVSYNVMISG 141
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ G L+ + ELF+ MP K V++T +I GF NE + +A F +M V PN++T+
Sbjct: 142 YVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTI 201
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
++++SA + + +H V+KM E V + +L+ +Y C ++V+A +F + E
Sbjct: 202 ATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPE 261
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+NIVS+N M++G+++ G + A +F ++ ++ LV T+ +++ V + E +
Sbjct: 262 KNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLV----TWGTIIDGYVRVERINEALMM 317
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
++SM + EP ++ GR ++ E L++++
Sbjct: 318 YRSMISA-GWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVV 357
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 199/625 (31%), Positives = 325/625 (52%), Gaps = 73/625 (11%)
Query: 2 ADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
A R ++N++++ L + + +A +FA MP R+ VS+ M+ G R G F EA +++
Sbjct: 92 AQRNVFTWNSLLS-LYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMF 150
Query: 62 VNM------PARWRD----------------------------SVC---SNALISGYLKV 84
++M P ++ S C +N++++ Y K
Sbjct: 151 LDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKC 210
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
G E A +FE M E+ V +W +MV GR+ A +F+ MP++ +V+W A++ GY
Sbjct: 211 GDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYN 270
Query: 145 KVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
+ F M MA + T+T + AC G QVH + R
Sbjct: 271 QNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILR------- 323
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER--MP 261
R+ ++ + N+LIS Y +G +E A + ++ M
Sbjct: 324 ----------SRMPYIGQVT--------------NALISMYAKSGSVENARGVMQQAVMA 359
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+ +S+T ++ G+ G+++ + E+F++M +D V WTA+I G+ N +EA F
Sbjct: 360 DLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRL 419
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M+R PN T+++VLS A+ A L G QIH ++ E S+ NS+V++Y++ G+
Sbjct: 420 MIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGS 479
Query: 382 VVDAYRIFTNIDERN-IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+ A R+F + R V++ SMI AQ+GLGE+A+ LF +M G+ P++ITF+ VLS
Sbjct: 480 LPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLS 539
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC HVG V+EG YF+ ++ + I P HYACMVD+L RAG +EA + I M EP
Sbjct: 540 ACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDA 599
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
WG+LL A R H N DLA+LAA+ L+ ++P ++ Y LS++YS G+ D ++ ++
Sbjct: 600 IAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRR 659
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLA 585
K K ++K G SW + ++VH+F A
Sbjct: 660 KDKSVKKETGFSWTHIGNRVHVFGA 684
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 234/491 (47%), Gaps = 70/491 (14%)
Query: 89 EAARIFEAM--VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV 146
EA R+F+ + +++V W S++ Y K GR+ +AR +F +MPE++ V+WT MV G +V
Sbjct: 81 EARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRV 140
Query: 147 DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
F + +FL M G++ TLT + +C G +VH V + G + +
Sbjct: 141 GRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVA 200
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
NS++ MYG+ G + A VF M +R SWN+++S H G ++ A LFE MP + V
Sbjct: 201 NSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIV 260
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
SW +I G++ G K++ F+ M +
Sbjct: 261 SWNAVIAGYNQNGLNAKALWFFSRM------------------------------LSYST 290
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD-- 384
+ P++ T++SVLSA A ++ G Q+HA++++ M + N+L+S+Y+K G+V +
Sbjct: 291 MAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENAR 350
Query: 385 -------------------------------AYRIFTNIDERNIVSYNSMISGFAQNGLG 413
A +F + R++V++ +MI G+ QNG
Sbjct: 351 GVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHN 410
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYA 472
+EA+ LFR M G PN T +VLS C + +E G I+ K++++L E
Sbjct: 411 DEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQ--EQSSSVSN 468
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH-LNLDLAKLAAQHL-MELE 530
+V + R+GSL A + + + + W +++ A H L D L + L + ++
Sbjct: 469 SIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVK 528
Query: 531 PDSATPYVVLS 541
PD T VLS
Sbjct: 529 PDRITFVGVLS 539
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 199/433 (45%), Gaps = 58/433 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAM------IT-------- 46
M DRT S+NA+I A N N +A F+ M +SY+ M IT
Sbjct: 254 MPDRTIVSWNAVI-AGYNQNGLNAKALWFFSRM-----LSYSTMAPDEFTITSVLSACAN 307
Query: 47 -GFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKD--VV 103
G V G A L MP + +NALIS Y K G E A + + V D V+
Sbjct: 308 LGMVSIGKQVHAYILRSRMPYIGQ---VTNALISMYAKSGSVENARGVMQQAVMADLNVI 364
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
++ ++++GY K G + ARE+FD M ++VVAWTAM+ GY + ++ +LF M R G
Sbjct: 365 SFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSG 424
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
NS T+ + C G Q+H R + + NSI+TMY R G + A
Sbjct: 425 PEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWAR 484
Query: 224 KVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSK 278
+VF + +++ V+W S+I +G E+A LFE M D +++ +++ +
Sbjct: 485 RVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHV 544
Query: 279 GNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
G +++ F + +K + + ++ + EA + +M V P+ +
Sbjct: 545 GFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQM---PVEPDAIA 601
Query: 334 LSSVLSASAATATLNQGSQIH--AHVVKMNMESDVSIQ-------NSLVSLYSKCGNVVD 384
S+LSA ++H A + ++ E +SI ++L ++YS CG D
Sbjct: 602 WGSLLSA----------CRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWND 651
Query: 385 AYRIFTNIDERNI 397
A +I+ ++++
Sbjct: 652 AAKIWKRRKDKSV 664
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 58/144 (40%), Gaps = 38/144 (26%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNM---------------------------------- 362
+L A G IHA VK +
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDE 88
Query: 363 ----ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ +V NSL+SLY+K G + DA +F + ER+ VS+ M+ G + G EA+
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIK 148
Query: 419 LFRKMKDEGLVPNQITFLSVLSAC 442
+F M +GL P Q T +VLS+C
Sbjct: 149 MFLDMVTDGLSPTQFTLTNVLSSC 172
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 198/642 (30%), Positives = 324/642 (50%), Gaps = 50/642 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVNMPARWRDSVCSNALI 78
A ++F MP +N V++ ++ G+ +RG +F EL V +V
Sbjct: 267 ASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCAN 326
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
S LK G+ + I + + G +VD Y K G I+A +F + + ++V W+A
Sbjct: 327 SKNLKQGQVIHSLIIKCGYEGNEFIGCG-LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSA 385
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ + E+ LF MR G N T+ L A + G +H V ++G
Sbjct: 386 LITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYG 445
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY-------------- 244
F+ D+ + N+++TMY + G + + K++ M RD +SWN+ +SG
Sbjct: 446 FETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFY 505
Query: 245 --------------------------VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
VH G A+ + ++ +FV T +I ++
Sbjct: 506 HMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVC-TALIDMYAKC 564
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
LE + FN + +D TWT II+ + Q E+A +F +M ++ V+PN+ TL+ L
Sbjct: 565 MYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCL 624
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
S ++ A+L G Q+H+ V K SD+ + ++LV +Y+KCG + +A +F + R+ +
Sbjct: 625 SGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTI 684
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++N++I G+AQNG G +AL FR M DEG+ P+ +TF +LSAC+H GLVEEG +F SM
Sbjct: 685 AWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSM 744
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+ I P +H ACMVDILGR G E D I M +W +LGA + H NL L
Sbjct: 745 YRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVL 804
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+ AA L EL+P+ + Y++LS++++ G+ D RVR K ++K PGCSW+
Sbjct: 805 GEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANG 864
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSL 619
+VH F++ S ++EI + L + + + PK ++ L
Sbjct: 865 QVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVL 906
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 202/397 (50%), Gaps = 44/397 (11%)
Query: 91 ARIFEAMVEKDVV-----AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
A+ ++ KDV+ W S+V+ Y K AR + KMP+++VV+WTA++ G +
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
D LF M+ G+ N TL +AC G Q+H + G D+ +
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
G++++ +Y + G ++ A+K+F M +++ V+WN L++GY G++ +LF M D
Sbjct: 251 GSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDV 310
Query: 266 ----VSWTTMITGFSSKGNLEK-----------------------------------SIE 286
+ TT++ G ++ NL++ +I
Sbjct: 311 KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIG 370
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+F + + D V W+A+I+ Q EE+ + F M D PNQ T+ S+LSA+ T
Sbjct: 371 VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGN 430
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L G IHA V K E+DV++ N+LV++Y K G V D +++ ++ +R+++S+N+ +SG
Sbjct: 431 LQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSG 490
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
G+ + L +F M +EG +PN TF+S+L +C+
Sbjct: 491 LHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 237/520 (45%), Gaps = 64/520 (12%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN--ALISGYLKVGR 86
+ A MP R+ VS+ A+I G V G ++ L+ M + + N L +G
Sbjct: 169 VLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ---NEGIMPNEFTLATGLKACSL 225
Query: 87 C-------EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
C + A+ F+ + D+ ++VD Y K G + A ++F MPE+N V W +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
++GY + LF SM + N TLT + + C ++G +H L+ + G+
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY 345
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ + +G ++ MY + G +A VF + K D V W++LI+ G+ EE+ +LF
Sbjct: 346 EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 260 M------PGK---------------------------------DFVSWTTMITGFSSKGN 280
M P + D ++T + G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+ +L+ M ++D ++W A +SG + Y+ F ML + PN T S+L +
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+ ++ G Q+HAH++K ++ + + +L+ +Y+KC + DA F + R++ ++
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTW 585
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
+I+ +AQ GE+ALN FR+M+ EG+ PN+ T LS C+ + +E G +
Sbjct: 586 TVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG-------QQ 638
Query: 461 LYNIEPGPEHY------ACMVDILGRAGSLAEAIDLINSM 494
L+++ H + +VD+ + G + EA L ++
Sbjct: 639 LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL 678
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 179/379 (47%), Gaps = 25/379 (6%)
Query: 7 ASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-- 64
A NA++T + N C +++ +++ +M R+ +S+ A ++G GM+ ++ +M
Sbjct: 451 AVSNALVTMYMKNGC-VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLE 509
Query: 65 ----PARWR-DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
P + S+ + + GR + A I + ++ + +++D Y K +
Sbjct: 510 EGFIPNMYTFISILGSCSCLFDVHYGR-QVHAHIIKNQLDDNNFVCTALIDMYAKCMYLE 568
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+A F+++ +++ WT ++ Y + + E + F M++ G+ N TL C
Sbjct: 569 DADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCS 628
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
G Q+H +V + G D+ +G++++ MY + G M+EA +F + +RD ++WN+
Sbjct: 629 SLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNT 688
Query: 240 LISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM---- 291
+I GY NG+ +A F M + D V++T +++ S +G +E+ E FN M
Sbjct: 689 IICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDF 748
Query: 292 ---PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
P D I G V +++E FI+ ++ + N L +VL AS L
Sbjct: 749 GISPTVDHCACMVDILGRVG--KFDE-LEDFIQKMQ--LSQNALIWETVLGASKMHNNLV 803
Query: 349 QGSQIHAHVVKMNMESDVS 367
G + + ++ E + S
Sbjct: 804 LGEKAANKLFELQPEEESS 822
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 144/317 (45%), Gaps = 46/317 (14%)
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
D+ W SL++ Y A + +MP +D VSWT +I G ++G SI LF
Sbjct: 146 DSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQ--- 202
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
EM + + PN+ TL++ L A + L+ G Q
Sbjct: 203 ----------------------------EMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+HA K+ + D+ + ++LV LY+KCG + A ++F + E+N V++N +++G+AQ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSAC-NHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
L LF M + + N+ T +VL C N L + I+ +K Y G E
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYE---GNEFI 351
Query: 472 AC-MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHL 526
C +VD+ + G +AI + ++ +P VW AL+ G++ ++ L HL
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSEESIKLF-----HL 405
Query: 527 MELEPDSATPYVVLSDL 543
M L Y + S L
Sbjct: 406 MRLGDTLPNQYTICSLL 422
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 63/109 (57%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
SS+L A+ +L IH +VK + D + SLV++Y+KC A + + +
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
R++VS+ ++I G G +++ LF++M++EG++PN+ T + L AC+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACS 224
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 201/644 (31%), Positives = 331/644 (51%), Gaps = 64/644 (9%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFV------RRGM 53
R + YNAMIT +NN Y A +F M + +YA+++ G ++ +
Sbjct: 111 RDTVMYNAMITGFSHNN-DGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCV 169
Query: 54 FYEAEELYVNMPARWRDSVCSNALISGYLKVGRC-------EEAARIFEAMVEKDVVAWG 106
+ A L A + SV SNAL+S Y RC A ++F+ + EKD +W
Sbjct: 170 QFHAAAL--KSGAGYVTSV-SNALVSVY---SRCASSPSLLHSARKVFDDIPEKDERSWT 223
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+M+ GY K G +E+ M E +VA+ AM+ GY+ +++ ++ M G+
Sbjct: 224 TMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIE 283
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSR---FGFDYDIILGNSIITMYGRLGFMDEA 222
+ T + AC + G QVH V R F F +D
Sbjct: 284 LDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFD-------------------- 323
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
NSL++ Y G+ EA +FE+MP KD VSW +++G+ S G++
Sbjct: 324 ---------------NSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
++ +F M EK+ ++W +ISG N EE + F M R+ P S + + A
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
G Q HA +VK+ +S +S N+L+++Y+KCG V +A ++F + + VS+N+
Sbjct: 429 VLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNA 488
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
+I+ Q+G G EA++++ +M +G+ P++ITFL+VL+AC+H GLV++G YF SM+T+Y
Sbjct: 489 LIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVY 548
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
I PG +HYA ++D+L R+G +EA +I S+ F+P +W ALL R H N++L +A
Sbjct: 549 RIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIA 608
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
A L L P+ Y++LS++Y+ G+ + RVR + + ++K CSWI ++ +VH
Sbjct: 609 ADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHT 668
Query: 583 FLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
FL S + + + LQ + K + + P + L +E D
Sbjct: 669 FLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESD 712
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 204/494 (41%), Gaps = 111/494 (22%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKN 132
N LI Y K + A ++F+ + E D +A +MV GYC G + AR +F++ P ++
Sbjct: 53 NRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRD 112
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF-RYREGVQVH 191
V + AM+ G+ + +LF M+ G + T + ++ VQ H
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFH 172
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLG----FMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+ G Y + N+++++Y R + A KVF + ++D SW ++++GYV N
Sbjct: 173 AAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKN 232
Query: 248 GEIEEAYRLFERM-PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
G + L + M V++ MI+G+
Sbjct: 233 GCFDLGKELLKGMDENMKLVAYNAMISGY------------------------------- 261
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
VN Y+EA M+ + ++ T SV+ A A L G Q+HA+V++ +
Sbjct: 262 VNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSF 320
Query: 367 SIQNSLVSLYSKC-------------------------------GNVVDAYRIFTNIDER 395
NSLV+LY KC G++ +A IF + E+
Sbjct: 321 HFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN------------------------ 431
NI+S+ MISG A+NG GEE L LF MK EG P
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFH 440
Query: 432 ----QITFLSVLSACNHV-------GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+I F S LSA N + G+VEE F++M L ++ + ++ LG+
Sbjct: 441 AQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVS-----WNALIAALGQ 495
Query: 481 AGSLAEAIDLINSM 494
G EA+D+ M
Sbjct: 496 HGHGVEAVDVYEEM 509
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 70/301 (23%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG + FGF + N +I +Y + +D A ++F +S+ D ++ +++SGY +G+
Sbjct: 36 VHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 250 IEEAYRLFERMP--GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
I A +FE P +D V + MITGFS + +I LF M + GF
Sbjct: 96 IALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE----------GF- 144
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA-TLNQGSQIHAHVVKMNMESDV 366
+P+ T +SVL+ A Q Q HA +K
Sbjct: 145 --------------------KPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVT 184
Query: 367 SIQNSLVSLYSKCGN----VVDAYRIFTNIDERN-------------------------- 396
S+ N+LVS+YS+C + + A ++F +I E++
Sbjct: 185 SVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKG 244
Query: 397 ------IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+V+YN+MISG+ GL +EAL + R+M G+ ++ T+ SV+ AC + L++
Sbjct: 245 MDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQL 304
Query: 451 G 451
G
Sbjct: 305 G 305
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 309/568 (54%), Gaps = 36/568 (6%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV 102
A+I + R G A +++ +P R NA++SGY K +A +F+ M E++V
Sbjct: 135 AVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNV 194
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
+ W +MV GY K + AR FD MPE++VV+W AM+ GY + E+ LF M
Sbjct: 195 ITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNA 254
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G+ + T + AC + + + + + +++ MY + G + A
Sbjct: 255 GIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAA 314
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
++F + AYR + V+W MI+ ++ GNL+
Sbjct: 315 RRIFDELG----------------------AYR--------NSVTWNAMISAYTRVGNLD 344
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSAS 341
+ ELFN MP ++ VTW ++I+G+ N Q A F EM+ K + P+++T+ SV+SA
Sbjct: 345 SARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISAC 404
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
L G+ + + + ++ +S N+++ +YS+CG++ DA R+F + R++VSYN
Sbjct: 405 GHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYN 464
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
++ISGFA +G G EA+NL MK+ G+ P+++TF+ VL+AC+H GL+EEG F+S+K
Sbjct: 465 TLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-- 522
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
+P +HYACMVD+LGR G L +A + M EP GV+G+LL A R H ++L +L
Sbjct: 523 ---DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGEL 579
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA L ELEPD++ +++LS++Y+ G+ +D R+R K ++K+ G SW+ K+H
Sbjct: 580 AANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLH 639
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKE 609
F+ +S +I L + K +E
Sbjct: 640 KFIVADRSHERSDDIYQLLIELRKKMRE 667
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 212/428 (49%), Gaps = 43/428 (10%)
Query: 105 WGSMVDGYCKKGRVIE--AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
W +++ +C + R +F+ NV +T+M+ Y + +F M+
Sbjct: 35 WVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGC 94
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G+ ++ IL ++ G G+ H V + G D + N++I MY RLG + A
Sbjct: 95 GVRPDAFVYPILIKSAGN-----GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHA 149
Query: 223 NKVFSMMS--KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
KVF + +R WN+++SGY +A LF+ MP ++ ++WT M+TG++ +
Sbjct: 150 RKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKD 209
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
LE + F+ MPE+ V+W A++SG+ N EE R F EM+ + P++ T +V+SA
Sbjct: 210 LEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISA 269
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT---------- 390
++ + + + + ++ + ++ +L+ +Y+KCG++ A RIF
Sbjct: 270 CSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVT 329
Query: 391 ------------NIDE----------RNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEG 427
N+D RN+V++NSMI+G+AQNG A+ LF++M +
Sbjct: 330 WNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKK 389
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
L P+++T +SV+SAC H+G +E G + + T I+ + M+ + R GS+ +A
Sbjct: 390 LTPDEVTMVSVISACGHLGALELGNWVVRFL-TENQIKLSISGHNAMIFMYSRCGSMEDA 448
Query: 488 IDLINSMT 495
+ M
Sbjct: 449 KRVFQEMA 456
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 196/464 (42%), Gaps = 87/464 (18%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
+R A +NAM++ S +A +F MP RN +++ AM+TG+ + A +
Sbjct: 160 ERKVADWNAMVSGYWKWE-SEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFD 218
Query: 63 NMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAMV----EKDVVAW------------ 105
MP R SV S NA++SGY + G EE R+F+ MV E D W
Sbjct: 219 CMPER---SVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGD 275
Query: 106 -----------------------GSMVDGYCKKGRVIEAREIFDKMPE-KNVVAWTAMVD 141
+++D Y K G + AR IFD++ +N V W AM+
Sbjct: 276 PCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMIS 335
Query: 142 GYMKVDCFEDGFDLFLSMR-RGGMAFNS-------------------------------I 169
Y +V + +LF +M R + +NS +
Sbjct: 336 AYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEV 395
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T+ + ACG G V ++ I N++I MY R G M++A +VF M
Sbjct: 396 TMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 455
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSI 285
+ RD VS+N+LISG+ +G EA L M D V++ ++T S G LE+
Sbjct: 456 ATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGR 515
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
++F + + + ++ + E+A R M R + P+ S+L+AS
Sbjct: 516 KVFESIKDPAIDHYACMVDLLGRVGELEDAKR---TMERMPMEPHAGVYGSLLNASRIHK 572
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRI 388
+ G ++ A+ + +E D S L+S +Y+ G D RI
Sbjct: 573 QVELG-ELAANKL-FELEPDNSGNFILLSNIYASAGRWKDVERI 614
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 159/350 (45%), Gaps = 29/350 (8%)
Query: 2 ADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
A R S ++NAMI+A ++ A E+F TMP RN V++ +MI G+ + G A EL+
Sbjct: 323 AYRNSVTWNAMISAYTRVG-NLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELF 381
Query: 62 VNMPARWR---DSVCSNALISGYLKVGRCEEAARIFEAMVEKD----VVAWGSMVDGYCK 114
M + D V ++IS +G E + + E + +M+ Y +
Sbjct: 382 KEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSR 441
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + +A+ +F +M ++VV++ ++ G+ + +L +M+ GG+ + +T +
Sbjct: 442 CGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGV 501
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRD 233
AC EG +V + D+ + + + GR+G +++A + M +
Sbjct: 502 LTACSHAGLLEEGRKVFESIKDPAIDHYACM----VDLLGRVGELEDAKRTMERMPMEPH 557
Query: 234 AVSWNSLISGYVHNGEIE----EAYRLFERMPGK--DFVSWTTMITGFSSKGNLEKSIEL 287
A + SL++ + ++E A +LFE P +F+ + + ++E+ E
Sbjct: 558 AGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREA 617
Query: 288 FNMMPEKDDVTWTAIISG-----FV----NNEQYEEAFRWFIEMLRKDVR 328
K W+ + G F+ ++E+ ++ ++ IE LRK +R
Sbjct: 618 MKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIE-LRKKMR 666
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/525 (35%), Positives = 294/525 (56%), Gaps = 7/525 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y G R IFD++P+KNVV + M+ Y+ + D +F +M G+ +
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + +A G+Q+H V R G D ++ +GN +I+MYG+ G + EA +V
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSK--GNL 281
M RD VSWNSL++G NG+ ++A + + M D + +++ ++ N+
Sbjct: 197 QMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNV 256
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
E+F + K V+W +I+ ++NN EA F++M V P+ ++++SVL A
Sbjct: 257 SFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 316
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ L G +IH +VV+ ++ ++ ++N+L+ +Y+KCG + A +F + R++VS+
Sbjct: 317 GDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWT 376
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
SMIS + NG G +A++LF +M+D GL P+ I F+SVLSAC+H GL++EG YFK M
Sbjct: 377 SMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEE 436
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
I P EH+ CMVD+LGRAG + EA I M EP VWGALL A R + N+ + L
Sbjct: 437 CKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLL 496
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA L +L P+ + YV+LS++Y+ G+ D VR K K I+K PG S L ++VH
Sbjct: 497 AADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVH 556
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
FLAG +S K+I L KE + P+ D +L +E +
Sbjct: 557 TFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEE 601
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 167/396 (42%), Gaps = 86/396 (21%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------------PARWRDSVCS- 74
IF +P +N V + MI +V ++ +A ++ NM P + S S
Sbjct: 92 HIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSE 151
Query: 75 ------------------------NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
N LIS Y K G EA R+ + M +DVV+W S+V
Sbjct: 152 DLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVA 211
Query: 111 GYCKKGRVIEA-------------------------------------REIFDKMPEKNV 133
G + G+ +A +E+F K+ K++
Sbjct: 212 GCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSL 271
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W M+ YM + D+FL M + ++I++ + ACG G ++H
Sbjct: 272 VSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEY 331
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V R +++L N++I MY + G ++ A +VF M RD VSW S+IS Y NG+ +A
Sbjct: 332 VVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDA 391
Query: 254 YRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIIS 304
LF RM D +++ ++++ S G L++ F +M E+ + + ++
Sbjct: 392 VSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVD 451
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
Q +EA+ + +M + PN+ ++LSA
Sbjct: 452 LLGRAGQVDEAYGFIKQM---PMEPNERVWGALLSA 484
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 154/392 (39%), Gaps = 74/392 (18%)
Query: 4 RTSASYNAMITALINNNCSIYEAF--EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
+ A A + + N C +F E+F + ++ VS+ MI ++ M EA +++
Sbjct: 235 KPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIF 294
Query: 62 VNMPARWRD----SVCSNALISGYLK---VGRCEEAARIFEAMVEK----DVVAWGSMVD 110
+ M D S+ S G L +GR RI E +V K +++ +++D
Sbjct: 295 LQMEDHAVDPDAISIASVLPACGDLSALLLGR-----RIHEYVVRKRLQPNLLLENALID 349
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K G + ARE+FD+M ++VV+WT+M+ Y D LF M+ G+ +SI
Sbjct: 350 MYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIA 409
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ AC G +DE F +M+
Sbjct: 410 FVSVLSAC-----------------------------------SHAGLLDEGRYYFKLMT 434
Query: 231 KRDAV-----SWNSLISGYVHNGEIEEAYRLFERMPGK-DFVSWTTMITGFSSKGN---- 280
+ + + ++ G+++EAY ++MP + + W +++ N
Sbjct: 435 EECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIG 494
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW----FIEMLRKDVRPNQLTLSS 336
L + +LF + PE+ + ++S Y +A RW + + K ++ S
Sbjct: 495 LLAADQLFQLCPEQS--GYYVLLSNI-----YAKAGRWEDVTTVRSIMKTKGIKKMPGVS 547
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
T G Q H ++ E DVS+
Sbjct: 548 NFELDNRVHTFLAGDQSHPQSKQIYEELDVSV 579
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 352 QIHAHV-VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
++H+ + + ++ S+ S+ L+ Y+ CG IF I ++N+V +N MI + N
Sbjct: 56 KLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNN 115
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH-----VGLVEEGFIYFKSMKTLYNIE 465
L +AL +F+ M G+ P+ T+ VL A + VG+ + + +
Sbjct: 116 HLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVG 175
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTHLNLD--LAKL 521
G ++ + G+ G L EA +++ M P V W +L+ + D L
Sbjct: 176 NG------LISMYGKCGCLVEACRVLDQM---PCRDVVSWNSLVAGCARNGQFDDALEVC 226
Query: 522 AAQHLMELEPDSAT 535
L+ L+PD+ T
Sbjct: 227 KEMELLGLKPDAGT 240
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMI--TGFVRRGMF 54
+A+++ S+N MI +NN+ EA +IF M +A+S A+++ G + +
Sbjct: 266 LANKSLVSWNVMIAVYMNNSMPA-EAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLL 324
Query: 55 YEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
YV + + NALI Y K G E A +F+ M +DVV+W SM+ Y
Sbjct: 325 GRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGM 384
Query: 115 KGRVIEAREIFDKMPE 130
G+ +A +F +M +
Sbjct: 385 NGKGRDAVSLFSRMQD 400
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/470 (37%), Positives = 275/470 (58%), Gaps = 9/470 (1%)
Query: 156 FLSMRRG-GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
F+ +RR ++ +S T +A R G+Q+H R GFD I +G ++I+MY
Sbjct: 90 FIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYA 149
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
G A +VF MS+ + V+WN++++ G++E A +F MP ++ SW M+ G
Sbjct: 150 ECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAG 209
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ G L + +F MP +D+V+W+ +I GF +N ++EAF +F E+LR+++R N+++L
Sbjct: 210 YAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSL 269
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID- 393
+ VLSA A G +H V K S+ N+L+ YSKCGNV A +F N+
Sbjct: 270 TGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPV 329
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
R+IVS+ S+I+G A +G GEEA+ LF +M++ G+ P+ ITF+S+L AC+H GLVEEG
Sbjct: 330 ARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCG 389
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
F MK LY IEP EHY CMVD+ GRA L +A + I M P +W LLGA H
Sbjct: 390 LFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIH 449
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N+++A+L L E++PD++ +V+LS++Y+V GK +D + +R ++K+PG S
Sbjct: 450 GNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSM 509
Query: 574 IILKDKVHLFLAGRK-------SCLDLKEIEVTLQTISKGTKEFDWPKHD 616
I + ++ F+AG K + L+EI + L+T + + HD
Sbjct: 510 IEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHD 559
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 175/372 (47%), Gaps = 28/372 (7%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NA+++ + G E A +F M +++ +W M+ GY K G + AR +F +MP ++ V
Sbjct: 173 NAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEV 232
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W+ M+ G+ CF++ F F + R + N ++LT + AC + + G +HG V
Sbjct: 233 SWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFV 292
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEA 253
+ GF Y + N++I Y + G + A VF M R VSW S+I+G +G EEA
Sbjct: 293 EKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEA 352
Query: 254 YRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDDVTWTAIIS 304
+LF M D +++ +++ S G +E+ LF+ M E + ++
Sbjct: 353 IQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVD 412
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
+ + ++A+ + EM V PN + ++L A + + + A + +M+
Sbjct: 413 LYGRAARLQKAYEFICEM---PVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMD--P 467
Query: 365 DVSIQNSLVS-LYSKCGNVVDAYRIFTNIDER--------NIVSYNSMISGFA----QNG 411
D S + L+S +Y+ G D I + E +++ + +I GF N
Sbjct: 468 DNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNE 527
Query: 412 LGEEALNLFRKM 423
+ EEA R++
Sbjct: 528 VTEEAHEKLREI 539
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 130/310 (41%), Gaps = 53/310 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
M++ ++NA++TA C E A ++F MP+RN S+ M+ G+ + G A
Sbjct: 164 MSEPNVVTWNAVLTAAFR--CGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARR 221
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEA----------------------------- 90
++ MP RD V + +I G+ G +EA
Sbjct: 222 VFYEMP--LRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQA 279
Query: 91 -----ARIFEAMVEKDVVAW-----GSMVDGYCKKGRVIEAREIFDKMP-EKNVVAWTAM 139
+I VEK + +++D Y K G V AR +F MP +++V+WT++
Sbjct: 280 GAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSI 339
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR--- 196
+ G C E+ LF M G+ + IT L AC EG GL S+
Sbjct: 340 IAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGC---GLFSKMKN 396
Query: 197 -FGFDYDIILGNSIITMYGRLGFMDEANK-VFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+G + I ++ +YGR + +A + + M +A+ W +L+ +G IE A
Sbjct: 397 LYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAE 456
Query: 255 RLFERMPGKD 264
+ R+ D
Sbjct: 457 LVKARLAEMD 466
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/617 (31%), Positives = 320/617 (51%), Gaps = 56/617 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMF---YEAEELYVNMPARWRDSVCSNALIS 79
+ +A IF + ++ VS+ ++ITG+ + G Y +L+ M R +D + + ++
Sbjct: 65 LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREM--RAQDILPNAYTLA 122
Query: 80 GYLKVGRCEEAA---RIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
G K +++ R A+V K D+ S+V YCK G V + ++F MPE+
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 132 NVVAWTAMVDGYMKVDCFEDG---FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
N W+ MV GY E+ F+LFL + G + + +L + G
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIY-VGLGR 241
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + + G + L N+++TMY + ++EA K+F R++++W+++++GY NG
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 249 EIEEAYRLFERM--------------------------PGKDFVSW-------------T 269
E EA +LF RM GK S+ T
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATT 361
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
++ ++ G L + + F+ + E+D WT++ISG+V N EEA + M + P
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIP 421
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N T++SVL A ++ ATL G Q+H H +K +V I ++L ++YSKCG++ D +F
Sbjct: 422 NDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF 481
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+++VS+N+MISG + NG G+EAL LF +M EG+ P+ +TF++++SAC+H G VE
Sbjct: 482 RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVE 541
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G+ YF M ++P +HYACMVD+L RAG L EA + I S + +W LL A
Sbjct: 542 RGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSA 601
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
+ H +L A + LM L ++ YV LS +Y+ +G+ RD RV + + K
Sbjct: 602 CKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEV 661
Query: 570 GCSWIILKDKVHLFLAG 586
GCSWI LK++ H+F+ G
Sbjct: 662 GCSWIELKNQYHVFVVG 678
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 246/482 (51%), Gaps = 52/482 (10%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF---DLFLSMRRGGM 164
+V+ Y K G++ +A IF+ + K+VV+W +++ GY + + LF MR +
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
N+ TL +F+A G Q H LV + DI + S++ MY + G +++ K
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-----ERMPGKD--------------- 264
VF+ M +R+ +W++++SGY G +EEA ++F E+ G D
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAAT 234
Query: 265 --------------------FVSWT-TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
FV+ + ++T +S +L ++ ++F+ +++ +TW+A++
Sbjct: 235 IYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
+G+ N + EA + F M ++P++ T+ VL+A + L +G Q+H+ ++K+ E
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ +LV +Y+K G + DA + F + ER++ + S+ISG+ QN EEAL L+R+M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
K G++PN T SVL AC+ + +E G ++ ++K + +E P A + + + G
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV-PIGSA-LSTMYSKCG 472
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL--DLAKLAAQHLME-LEPDSATPYVV 539
SL + +L+ T W A++ +G +H + +L + L E +EPD T +
Sbjct: 473 SLEDG-NLVFRRTPNKDVVSWNAMI-SGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNI 530
Query: 540 LS 541
+S
Sbjct: 531 IS 532
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 190/371 (51%), Gaps = 58/371 (15%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G VHG + R G I N ++ Y + G + +A+ +F+ + +D VSWNSLI+GY
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 247 NGEIEEAY---RLFERMPGKDFVSW----------------------------------- 268
NG I +Y +LF M +D +
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 269 ----TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
T+++ + G +E +++F MPE++ TW+ ++SG+ + EEA + F LR
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 325 --KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
++ + ++VLS+ AAT + G QIH +K + V++ N+LV++YSKC ++
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+A ++F + +RN +++++M++G++QNG EA+ LF +M G+ P++ T + VL+AC
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 443 NHVGLVEEGFIYFKSMKTLYN--IEPGPEHY----ACMVDILGRAGSLAEAIDLINSMTF 496
+ + +EEG K L++ ++ G E + +VD+ +AG LA+A + +
Sbjct: 333 SDICYLEEG-------KQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ- 384
Query: 497 EPPPGVWGALL 507
E +W +L+
Sbjct: 385 ERDVALWTSLI 395
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 168/300 (56%), Gaps = 21/300 (7%)
Query: 10 NAMITALINNNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---- 64
NA++T + + C S+ EA ++F + RN+++++AM+TG+ + G EA +L+ M
Sbjct: 260 NALVT--MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 65 --PARWRD----SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
P+ + + CS+ YL+ G+ + + + + E+ + A ++VD Y K G +
Sbjct: 318 IKPSEYTIVGVLNACSDIC---YLEEGK-QLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+AR+ FD + E++V WT+++ GY++ E+ L+ M+ G+ N T+ + +AC
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 433
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G QVHG + GF ++ +G+++ TMY + G +++ N VF +D VSWN
Sbjct: 434 SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWN 493
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
++ISG HNG+ +EA LFE M + D V++ +I+ S KG +E+ FNMM ++
Sbjct: 494 AMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQ 553
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ ++ P+ TL L+ + L G +H +++ + + N LV+ Y+KCG +
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNG---LGEEALNLFRKMKDEGLVPNQITFLSVL 439
A+ IF I +++VS+NS+I+G++QNG + LFR+M+ + ++PN T +
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 440 SA 441
A
Sbjct: 126 KA 127
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/549 (34%), Positives = 304/549 (55%), Gaps = 43/549 (7%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N + Y ++G ++ R+FE +++K++++W + + + G + AR++FD+MP+++VV
Sbjct: 749 NRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVV 808
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W M+ GY+ F+D F F M++ G+ + T + L R G Q+H +
Sbjct: 809 SWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSACR---GKQIHASM 865
Query: 195 SRFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI-----SGYVHNG 248
R G D ++++GNS+I MYG+ G +D A VF M + D +SWNSLI SGY +
Sbjct: 866 IRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQNLA 925
Query: 249 ------------------------------EIEEAYRLFERMPGKDFVSWTTM----ITG 274
++E+ ++F F+S + + I
Sbjct: 926 LRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDL 985
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
FS LE S+ +F + + D V A+IS + + E A + F+ LR+++RP + TL
Sbjct: 986 FSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTL 1045
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S VLSA + ++QGSQIH+ VVK +ESDV + +SLV +Y+K G + A + F I
Sbjct: 1046 SIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGA 1105
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
R+++S+N+MI G A NG +AL +F+++ G P++IT VL ACN GLV+EG
Sbjct: 1106 RDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSI 1165
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F SM+ Y + P EHYAC+VD++ R G L EA+D++ M EP +WG+LL A +
Sbjct: 1166 FSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYG 1225
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+L + A+ +MELEP S+ PY+VL+ Y + G+ RV K K +RK GCSWI
Sbjct: 1226 DLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEKGVRKVIGCSWI 1285
Query: 575 ILKDKVHLF 583
+K+ V +F
Sbjct: 1286 GIKNHVFVF 1294
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 188/609 (30%), Positives = 303/609 (49%), Gaps = 75/609 (12%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA--- 57
M + + S+N +I+ ++ A +F MP +N +++ +MI G+ G EA
Sbjct: 99 MPHKDAFSWNVVISGFAKEG-NLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGL 157
Query: 58 -EELYVNMPARWR------------------------------------DSVCSNALISG 80
++L +N R+ DSV ++L++
Sbjct: 158 FKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNL 217
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
Y K G + A + M E D + +++ GY GR+ +AR IF VV W +M+
Sbjct: 218 YGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMI 277
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY+ + + +LF +MRR G+ + T + AC +G+QVH V + GF
Sbjct: 278 SGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFT 337
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
DII+ ++++ MY + D+A K+FS + D + NS
Sbjct: 338 NDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNS--------------------- 376
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
MIT +S+ G ++ + ++F+ MP K ++W ++I GF N EA F
Sbjct: 377 ----------MITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFC 426
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
EM + +R ++ +L+ V+SA A+ ++L G QI A + +E D I SLV Y KCG
Sbjct: 427 EMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCG 486
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
V ++F + + + V +NSM+ G+A NG G EALN+F +M+ G+ P ITF+ VLS
Sbjct: 487 LVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLS 546
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC+H GLVEEG +F +MK Y+I PG EHY+CMVD+ RAG L +A++LI M +
Sbjct: 547 ACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADT 606
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
+W ++L H N L K A+ +++L+P+++ YV LS +Y+ D R +
Sbjct: 607 SMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATF---EDWGRSAQVR 663
Query: 561 KLKRIRKSP 569
KL +K P
Sbjct: 664 KLMYDKKIP 672
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 244/517 (47%), Gaps = 75/517 (14%)
Query: 18 NNNCSIYEAFEIFATMPMRNAVSYAAMITG------FVRRGMFYEAEELYVNMPARWRDS 71
NN SIY + +++ V ++ + G + R EA++L+ MP R +
Sbjct: 17 NNYGSIYRG-RXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKR--NC 73
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
N +I GYLK G ++ +F++M KD +W ++ G+ K+G + AR +F++MP K
Sbjct: 74 FSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWK 133
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM---AFNSITLTILFEACGRFFRYREGV 188
N +AW +M+ GY ++ LF + + ++ L + AC G
Sbjct: 134 NGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGK 193
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + ++D +LG+S++ +YG+ G +D AN V ++M + DA S ++LISGY G
Sbjct: 194 QIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCG 253
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
+ +A R+F V W +MI+G+ + +++ELFN
Sbjct: 254 RMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFN------------------- 294
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
M RK V+ + T +SVLSA + ++QG Q+HAHV K+ +D+ I
Sbjct: 295 ------------NMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIII 342
Query: 369 Q-------------------------------NSLVSLYSKCGNVVDAYRIFTNIDERNI 397
NS++++YS CG + DA +IF + +++
Sbjct: 343 DSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSL 402
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
+S+NSMI GF+QN EAL+LF +M GL ++ + V+SAC + +E G F +
Sbjct: 403 ISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIF-A 461
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
T+ +E +VD + G + L + M
Sbjct: 462 RATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRM 498
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 163/315 (51%), Gaps = 45/315 (14%)
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDII-LGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+C + G +H L + G + ++ +GN ++ MY R M EA ++F M KR+
Sbjct: 15 SCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNCF 74
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
SWN++I GY+ +G ++ LF+ MP KD SW +I+GF+ +GNLE + LFN MP K+
Sbjct: 75 SWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWKN 134
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL--------TLSSVLSASAATATL 347
+ W ++I G+ N + +EA F KD+ N L L++V+ A L
Sbjct: 135 GIAWNSMIHGYACNGRPKEAVGLF-----KDLSLNPLERFCGDTFVLATVVGACTNLGAL 189
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV------------------------- 382
+ G QIHA +V +E D + +SLV+LY KCG++
Sbjct: 190 DCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGY 249
Query: 383 ------VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
DA RIF +V +NSMISG+ N EAL LF M+ +G+ + TF
Sbjct: 250 ASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFA 309
Query: 437 SVLSACNHVGLVEEG 451
SVLSAC+ +G++++G
Sbjct: 310 SVLSACSTLGIIDQG 324
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 146/273 (53%), Gaps = 35/273 (12%)
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
+F R + ++ + GF+ LGN + +Y +LG +++ +VF + ++ +SWN
Sbjct: 722 KFMAARRTLLEFDMLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNI 781
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+ +V GE+E A +F+ MP +D VSW TMI+G+ S G
Sbjct: 782 FLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFG-------------------- 821
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+++AFR+F EM + +RP+ T S++LS ++ +G QIHA +++
Sbjct: 822 -----------LFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSAC---RGKQIHASMIR 867
Query: 360 MNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
++ S+V + NSL+ +Y K G V A+ +F ++E +I+S+NS+I ++G AL
Sbjct: 868 NGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALR 927
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
F M+ G P+Q T +V++ C+++ +E+G
Sbjct: 928 QFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKG 960
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 178/400 (44%), Gaps = 44/400 (11%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
D+ S+N + A + + A ++F MP R+ VS+ MI+G+V G+F +A +
Sbjct: 773 DKNLISWNIFLKAFVRFG-ELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFS 831
Query: 63 NM-PARWRDSVCSNALISGYLKV---GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
M A R S + + + ++ G+ A+ I + +VV S++ Y K G V
Sbjct: 832 EMQKAGIRPSGFTYSTLLSFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVV 891
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
A +F M E ++++W +++ K F+ MR G + + T++ + C
Sbjct: 892 DYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVC 951
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+G Q+ L R GF + I+ ++ I ++ + ++++ +VF + + D+V N
Sbjct: 952 SNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCN 1011
Query: 239 SLISGYVHNGEIEEAYRLF-----ERMPGKDF---------------------------- 265
++IS Y +G E A +LF E + +F
Sbjct: 1012 AMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKS 1071
Query: 266 ------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
+ ++++ ++ G ++ +++ F + +D ++W +I G N + +A F
Sbjct: 1072 GLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIF 1131
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
E+L P+++TL+ VL A +++G I + + K
Sbjct: 1132 KELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEK 1171
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 91/230 (39%), Gaps = 36/230 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D + +++L+ Y K G + A + F + +D+++W +M+ G GRV +A EIF +
Sbjct: 1076 DVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKE-- 1133
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ GG + ITL + AC EG+
Sbjct: 1134 -----------------------------LLIGGPPPDEITLAGVLLACNVGGLVDEGLS 1164
Query: 190 VHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA-VSWNSLISGYVHN 247
+ + + +G I I+ M R G + EA + +M + + W SL+
Sbjct: 1165 IFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIY 1224
Query: 248 GEIEEAYRLFER---MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
G++ R+ ER + + + + + + +G E + + M EK
Sbjct: 1225 GDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEK 1274
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 280/485 (57%), Gaps = 6/485 (1%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD + + NV W M+ ++ + L+ M N T + +AC
Sbjct: 94 VFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGV 153
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS-MMSKRDAVSWNSLIS 242
EGVQVH + + G D + +S I MY G + EA ++ + DAV WN++I
Sbjct: 154 VAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMID 213
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVS-WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
GY+ GE+E A LFE MP + +S W MI+GFS G +E + E F+ M E+D+++W+A
Sbjct: 214 GYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSA 273
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+I G++ + EA F +M ++ +RP + L SVLSA A L+QG IH + + +
Sbjct: 274 MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNS 333
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
++ D + SLV +Y+KCG + A+ +F + + + S+N+MI G A +G E+A++LF
Sbjct: 334 IQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFS 393
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
KM + PN+ITF+ VL+AC H GLV++G F SM+ Y +EP EHY C+VD+LGRA
Sbjct: 394 KMD---IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRA 450
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L EA +++S+ EP P VWGALLGA R H N++L + + L+ELEP ++ Y +LS
Sbjct: 451 GLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLS 510
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL-KDKVHLFLAGRKSCLDLKEIEVTL 600
++Y+ G+ + VR K + I+ +PG S I L + +VH F+ G S +K+I L
Sbjct: 511 NIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQML 570
Query: 601 QTISK 605
+ +
Sbjct: 571 DKVKE 575
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 178/366 (48%), Gaps = 42/366 (11%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA-WGSMVDGYCKKGRVIEAREIFDKM 128
D+VC NA+I GYL+ G E A +FE M ++ +++ W +M+ G+ + G V ARE FD+M
Sbjct: 204 DAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEM 263
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
E++ ++W+AM+DGY++ CF + ++F M++ + L + AC +G
Sbjct: 264 KERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGR 323
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+H R D +LG S++ MY + G +D A +VF MS ++ SWN++I G +G
Sbjct: 324 WIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHG 383
Query: 249 EIEEAYRLFERM---PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
E+A LF +M P + +++ ++ + G ++K + +FN M ++ V
Sbjct: 384 RAEDAIDLFSKMDIYPNE--ITFVGVLNACAHGGLVQKGLTIFNSMRKEYGV-------- 433
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
E E + +++L R LT + + +S T E
Sbjct: 434 ----EPQIEHYGCIVDLLG---RAGLLTEAEKVVSSIPT------------------EPT 468
Query: 366 VSIQNSLVSLYSKCGNVVDAYR---IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
++ +L+ K GNV R I ++ +N Y + + +A+ G EE + +
Sbjct: 469 PAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKL 528
Query: 423 MKDEGL 428
MK+ G+
Sbjct: 529 MKERGI 534
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+ E S+ +F+ + + + W +I + N + +A + EM+ RPN+ T +VL
Sbjct: 87 SFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLK 146
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIV 398
A + + + +G Q+HAH+VK + D I +S + +Y+ G +V+A RI + E + V
Sbjct: 147 ACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAV 206
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
+N+MI G+ + G E A LF M D ++ +S S C G+VE +F M
Sbjct: 207 CWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRC---GMVEVAREFFDEM 263
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
K I ++ M+D + G EA+++ + M E
Sbjct: 264 KERDEIS-----WSAMIDGYIQEGCFMEALEIFHQMQKE 297
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG-----NVVDAYRIFTNIDER 395
+ T +L+ Q HA +++ D I SLV Y+ + + R+F + +
Sbjct: 42 TQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKP 101
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
N+ +N MI +N +A+ L+ +M PN+ T+ +VL AC+ G+V EG
Sbjct: 102 NVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEG 157
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/493 (34%), Positives = 281/493 (56%), Gaps = 1/493 (0%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y +V+ AR +FD++P +V+ W ++ Y F+ DL+ SM G+ N T
Sbjct: 53 YLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTY 112
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ +AC +GV++H FG + D+ + +++ Y + G + EA ++FS MS
Sbjct: 113 PFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH 172
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG-FSSKGNLEKSIELFNM 290
RD V+WN++I+G G ++A +L +M + ++ I G + L + ++F++
Sbjct: 173 RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDV 232
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M +++V+W+A+I G+V ++ +EA F M + P+ T+ VL A + A L G
Sbjct: 233 MGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG 292
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
H +++ +D I N+L+ +YSKCG + A +F +D +IVS+N+MI G+ +
Sbjct: 293 FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIH 352
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
GLG EAL LF + GL P+ ITF+ +LS+C+H GLV EG ++F +M ++I P EH
Sbjct: 353 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEH 412
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE 530
CMVDILGRAG + EA I +M FEP +W ALL A R H N++L + ++ + L
Sbjct: 413 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 472
Query: 531 PDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSC 590
P+S +V+LS++YS G+ D +R+ +K ++K PGCSWI + VH F+ G +S
Sbjct: 473 PESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSH 532
Query: 591 LDLKEIEVTLQTI 603
L L +I L+ +
Sbjct: 533 LQLSQINRKLEEL 545
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 120/522 (22%), Positives = 211/522 (40%), Gaps = 79/522 (15%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALIS 79
A +F +P + + + +I + G F A +LY +M P ++ A S
Sbjct: 62 ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKA-CS 120
Query: 80 GYLKVG---RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
G L + A++F +E DV ++VD Y K G ++EA+ +F M ++VVAW
Sbjct: 121 GLLAIEDGVEIHSHAKMFG--LESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAW 178
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
AM+ G +D L + M+ G+ NS T+ + C R+ V G+ +
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNE 238
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS----KRDAVSWNSLISGYVHNGEIEE 252
+ +++I Y M EA +F MM D + ++ H ++
Sbjct: 239 VSW-------SAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQH 291
Query: 253 AY----RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
+ L R D + +I +S G + + E+FN M D V+W A+I G+
Sbjct: 292 GFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGI 351
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
+ EA F ++L ++P+ +T +LS+ + + + +G + M D SI
Sbjct: 352 HGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGR-----LWFDAMSRDFSI 406
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
V C +VD + GL +EA + R M E
Sbjct: 407 ----VPRMEHCICMVDI---------------------LGRAGLIDEAHHFIRNMPFE-- 439
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE---HYACMVDILGRAGSLA 485
P+ + ++LSAC +E G K +++L GPE ++ + +I AG
Sbjct: 440 -PDVRIWSALLSACRIHKNIELGEEVSKKIQSL-----GPESTGNFVLLSNIYSAAGRWD 493
Query: 486 EAIDL-----------INSMTFEPPPGVWGALLGAGRTHLNL 516
+A + I ++ G+ A +G ++HL L
Sbjct: 494 DAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQL 535
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 8/214 (3%)
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
LR +V+ N L L L A + +L + +IH H +K +D S+ + L LY C V
Sbjct: 3 LRFEVKNNYLHL---LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQV 59
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
V A R+F I +++ +N +I +A NG + A++L+ M G+ PN+ T+ VL AC
Sbjct: 60 VLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKAC 119
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+ + +E+G + S ++ +E +VD + G L EA L +SM+
Sbjct: 120 SGLLAIEDG-VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA- 177
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
W A++ + L A Q +M+++ + P
Sbjct: 178 WNAMIAGCSLY---GLCDDAVQLIMQMQEEGICP 208
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/625 (30%), Positives = 325/625 (52%), Gaps = 46/625 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLK 83
A ++FA + R+ VSY M+ + ++ E L+ M + D V L+ +
Sbjct: 182 ARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTT 241
Query: 84 VGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
+E RI + VE+ D+ ++V + G V A++ F + +++VV + A+
Sbjct: 242 PSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNAL 301
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ + + F+ + MR G+A N T + AC G +H +S G
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D+ +GN++I+MY R G + +A ++F M KRD +SWN++I+GY + EA RL+++
Sbjct: 362 SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQ 421
Query: 260 M------PGK-------------------DFVSWTTMITGFSSKGNLEKSI--------- 285
M PG+ + + +G S G+L ++
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGS 481
Query: 286 -----ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+F +D ++W ++I+G + YE A++ F EM +++ P+ +T +SVLS
Sbjct: 482 LMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSG 541
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
L G QIH + + ++ DV++ N+L+++Y +CG++ DA +F ++ R+++S+
Sbjct: 542 CKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSW 601
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGL-VPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+MI G A G +A+ LF +M++EG P+ TF S+LSACNH GLV EG+ F SM+
Sbjct: 602 TAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSME 661
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
+ Y + P EHY C+V +LGRA EA LIN M F P VW LLGA R H N+ LA
Sbjct: 662 SEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALA 721
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
+ AA + ++L + Y++LS++Y+ G+ D ++R + + IRK PG SWI + +
Sbjct: 722 EHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNI 781
Query: 580 VHLFLAGRKSCLDLKEIEVTLQTIS 604
+H F+A +S + EI L+ +S
Sbjct: 782 IHEFIAADRSHPETAEIYAELKRLS 806
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 271/539 (50%), Gaps = 59/539 (10%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCS 74
S+ +A ++F MP R+ +S+ ++I+ + ++G +A +L+ M P + S+ +
Sbjct: 77 SVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILT 136
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
L+ G+ + ++I +A ++D S++ Y K G + AR++F + ++VV
Sbjct: 137 ACYSPAELENGK-KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVV 195
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
++ M+ Y + ++ LF M G++ + +T L +A EG ++H L
Sbjct: 196 SYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLT 255
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
G + DI +G +++TM R G +D A + F ++ RD V +N+LI+ +G EA+
Sbjct: 256 VEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAF 315
Query: 255 RLFERM--------------------------PGK-------------DFVSWTTMITGF 275
+ RM GK D +I+ +
Sbjct: 316 EQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMY 375
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ G+L K+ ELF MP++D ++W AII+G+ E EA R + +M + V+P ++T
Sbjct: 376 ARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFL 435
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+LSA A ++ G IH +++ ++S+ + N+L+++Y +CG++++A +F R
Sbjct: 436 HLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE-----E 450
+++S+NSMI+G AQ+G E A LF++M++E L P+ ITF SVLS C + +E
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH 555
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G I ++ N+ ++++ R GSL +A ++ +S+ W A++G
Sbjct: 556 GRITESGLQLDVNLGNA------LINMYIRCGSLQDARNVFHSLQHRDVMS-WTAMIGG 607
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 256/547 (46%), Gaps = 78/547 (14%)
Query: 39 VSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGRCEEAARIFEA 96
+Y A++ R+ + EA+ ++ M D SN LI+ Y+K +A ++F+
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 97 MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF 156
M +DV++W S++ Y ++G F K F LF
Sbjct: 88 MPRRDVISWNSLISCYAQQG--------FKK-----------------------KAFQLF 116
Query: 157 LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
M+ G N IT + AC G ++H + + G+ D + NS+++MYG+
Sbjct: 117 EEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKC 176
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMI 272
G + A +VF+ +S RD VS+N+++ Y ++E LF +M + D V++ ++
Sbjct: 177 GDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL 236
Query: 273 TGFSSK-----------------------------------GNLEKSIELFNMMPEKDDV 297
F++ G+++ + + F + ++D V
Sbjct: 237 DAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVV 296
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+ A+I+ + EAF + M V N+ T S+L+A + + L G IH+H+
Sbjct: 297 VYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHI 356
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+ SDV I N+L+S+Y++CG++ A +F + +R+++S+N++I+G+A+ EA+
Sbjct: 357 SEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAM 416
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVD 476
L+++M+ EG+ P ++TFL +LSAC + +G I+ +++ I+ +++
Sbjct: 417 RLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS--GIKSNGHLANALMN 474
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM--ELEPDSA 534
+ R GSL EA ++ W +++ H + + A Q + ELEPD+
Sbjct: 475 MYRRCGSLMEAQNVFEGTQARDVIS-WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNI 533
Query: 535 TPYVVLS 541
T VLS
Sbjct: 534 TFASVLS 540
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 130/236 (55%), Gaps = 4/236 (1%)
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGF 275
D +N ++ D ++ +L+ + EA R+ +M G D +I +
Sbjct: 13 DVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMY 72
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
++ + ++F MP +D ++W ++IS + ++AF+ F EM PN++T
Sbjct: 73 VKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYI 132
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L+A + A L G +IH+ ++K + D +QNSL+S+Y KCG++ A ++F I R
Sbjct: 133 SILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR 192
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++VSYN+M+ +AQ +E L LF +M EG+ P+++T++++L A +++EG
Sbjct: 193 DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 296/557 (53%), Gaps = 56/557 (10%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D + +++D Y K G + A E+F MPE+NVV+WTA++ G+++ + L +MR
Sbjct: 38 DTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMR 97
Query: 161 R-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
+A N TL+ +ACG GV +HG R GF+ ++ NS++ +Y + G +
Sbjct: 98 SLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRI 157
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----------DF---- 265
+A +VF R+ V+WN++ISGY H G ++ +F M + +F
Sbjct: 158 GDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFAS 217
Query: 266 ----------------VSWTTMITGFSSKGN-----------------LEKSIELFNMMP 292
V +I G S+ N L ++++FN +
Sbjct: 218 LLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLE 277
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+K+ + WT +I G Q +EA F VR + LSSV+ A A + QG Q
Sbjct: 278 QKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQ 337
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H + VK DVS+ NSL+ +Y KCG +A R F + RN+VS+ +MI+G ++G
Sbjct: 338 VHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGH 397
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
G+EA+++F +M+ EG+ P+++ +L++LSAC+H GLVEE YF +++ + P EHYA
Sbjct: 398 GQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYA 457
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
CMVD+LGRAG L+EA DL+ +M P GVW LL A R H N+ + + A + L+ ++ D
Sbjct: 458 CMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGD 517
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS--- 589
+ YV+LS++++ G R+ RVR + + +RK GCSW+ + + H F G
Sbjct: 518 NPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHP 577
Query: 590 -----CLDLKEIEVTLQ 601
C L+++E T++
Sbjct: 578 RAADICCVLRDVERTMR 594
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G D + +I ++ G L + E+F MPE++ V+WTA++ GF+ + E R
Sbjct: 36 GSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGA 95
Query: 322 MLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M DV PN+ TLS+ L A + G IH V+ E + NSLV LYSK G
Sbjct: 96 MRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGG 155
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK-----DEGLVPNQITF 435
+ DA R+F RN+V++N+MISG+A G G ++L +FR+M+ +E P++ TF
Sbjct: 156 RIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTF 215
Query: 436 LSVLSACNHVGLVEEGFIYFKSM 458
S+L AC +G EG +M
Sbjct: 216 ASLLKACGSLGAAREGAQVHAAM 238
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 156/323 (48%), Gaps = 49/323 (15%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G Q+HG + + GF D +LGN++I MY + G + A +VF M +R+ VSW +L+ G++
Sbjct: 23 GAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLR 82
Query: 247 NGEIEEAYRLFERM-------PGKDFVSWTTMITG------------------------- 274
+G+ E RL M P + +S + G
Sbjct: 83 HGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHV 142
Query: 275 --------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK- 325
+S G + + +F+ ++ VTW A+ISG+ + ++ F EM ++
Sbjct: 143 VANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRR 202
Query: 326 ----DVRPNQLTLSSVLSASAATATLNQGSQIHAHVV--KMNMESDVSIQNSLVSLYSKC 379
D +P++ T +S+L A + +G+Q+HA +V ++ S+ + +L+ +Y KC
Sbjct: 203 QEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKC 262
Query: 380 GNVVD-AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
++ A ++F ++++N + + ++I G AQ G +EA+ LF + G+ + SV
Sbjct: 263 RCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSV 322
Query: 439 LSACNHVGLVEEGF-IYFKSMKT 460
+ LVE+G ++ ++KT
Sbjct: 323 VGVFADFALVEQGRQVHCYTVKT 345
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 169/399 (42%), Gaps = 65/399 (16%)
Query: 14 TALINNNCSIYE-------AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA 66
T L NN +Y A E+F MP RN VS+ A++ GF+R G E L M
Sbjct: 39 TMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAM-- 96
Query: 67 RWRDSVCSNAL-ISGYLK----VGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGR 117
R V N +S LK VG I A V E V S+V Y K GR
Sbjct: 97 RSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGR 156
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR-----GGMAFNSITLT 172
+ +AR +FD +N+V W AM+ GY D +F M++ + T
Sbjct: 157 IGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFA 216
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDY--DIILGNSIITMYGRL-GFMDEANKVFSMM 229
L +ACG REG QVH + G + IL +++ MY + + A +VF+ +
Sbjct: 217 SLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRL 276
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------------------- 260
+++A+ W ++I G+ G+++EA LF R
Sbjct: 277 EQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGR 336
Query: 261 ----------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
G D ++I + G +++ F +P ++ V+WTA+I+G +
Sbjct: 337 QVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHG 396
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+EA F EM + V P+++ ++LSA + + + +
Sbjct: 397 HGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEE 435
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 185/435 (42%), Gaps = 50/435 (11%)
Query: 13 ITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR--- 69
+ L + I +A +F RN V++ AMI+G+ G ++ ++ M R +
Sbjct: 147 LVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEE 206
Query: 70 ----DSVCSNALISGYLKVGRCEEAARIFEAMVEKDV------VAWGSMVDGYCK-KGRV 118
D +L+ +G E A++ AMV + V + G+++D Y K + +
Sbjct: 207 DHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLL 266
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
A ++F+++ +KN + WT ++ G+ + ++ +LF G+ + L+ +
Sbjct: 267 PMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVF 326
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
F +G QVH + D+ + NS+I MY + G DEA + F + R+ VSW
Sbjct: 327 ADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWT 386
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
++I+G +G +EA +FE M + E D+V
Sbjct: 387 AMINGLGKHGHGQEAIHMFEEMRAEGV---------------------------EPDEVA 419
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKD--VRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+ A++S ++ EE R+F +R D +RP + ++ L++ +
Sbjct: 420 YLALLSACSHSGLVEECRRYF-SAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDL--- 475
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVV---DAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
V M M V + +L+S NV +A ID N V+Y + + FA+ G
Sbjct: 476 VATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDW 535
Query: 414 EEALNLFRKMKDEGL 428
E + M+ GL
Sbjct: 536 RECQRVRGAMRRRGL 550
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
++ +L ASAA++ ++ G+Q+H ++K+ SD + N+L+ +Y+KCG + A +F +
Sbjct: 7 IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKD-EGLVPNQITFLSVLSACNHVGLVEEG 451
ERN+VS+ +++ GF ++G E L L M+ + PN+ T + L AC VG + G
Sbjct: 67 ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAG 125
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 24/249 (9%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
A++ + C + A ++F + +NA+ + +I G + G EA EL+ W
Sbjct: 253 GALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRF---WS 309
Query: 70 DSVCSN-----ALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIE 120
V ++ +++ + E+ ++ V+ DV S++D Y K G E
Sbjct: 310 SGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDE 369
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A F ++P +NVV+WTAM++G K ++ +F MR G+ + + L AC
Sbjct: 370 AARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSH 429
Query: 181 ------FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
RY ++ + Y ++ + GR G + EA + + M
Sbjct: 430 SGLVEECRRYFSAIRHDRRLRPRAEHY-----ACMVDLLGRAGELSEAKDLVATMPMAPT 484
Query: 235 VS-WNSLIS 242
V W +L+S
Sbjct: 485 VGVWQTLLS 493
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/629 (31%), Positives = 323/629 (51%), Gaps = 87/629 (13%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY-------VNMPARWR----- 69
SI +A +F MP RN VS+ M++ M +EA LY + P ++
Sbjct: 53 SIIDARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVL 112
Query: 70 --------------------------DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV 103
D V NAL+ Y+K G +A R+F + K+
Sbjct: 113 KACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNAT 172
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG- 162
+W +++ GY K+G + +A ++FDKMPE ++V+W +++ G VD F+SM G
Sbjct: 173 SWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGL--VDNASSRALRFVSMMHGK 230
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G+ + T + +ACG G ++H + + GF+ +++I MY + EA
Sbjct: 231 GLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEA 290
Query: 223 NKVFSMMSKRDAVS-----WNSLISGYVHNGEIEEAYRLFERMPGK-------------- 263
K+F + +VS WNS++SG+V NG+ EA + M
Sbjct: 291 TKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLK 350
Query: 264 -----DFVSWTTMITGF--------------------SSKGNLEKSIELFNMMPEKDDVT 298
D +S + + GF + +G++ ++ LF +P+KD V
Sbjct: 351 ICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVA 410
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W+++I+G + AF F++M+ ++ + +S VL A ++ A+ G Q+H+ +
Sbjct: 411 WSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCL 470
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K ES+ + +L+ +Y+KCG++ DA +F + E + +S+ S+I G AQNG EEA++
Sbjct: 471 KKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAIS 530
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
L KM + G PN+IT L VL+AC H GLVEE + F S++T + + P PEHY CMVDIL
Sbjct: 531 LLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDIL 590
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
G+AG EA+ LI+ M F+P +W +LLGA T+ N DLA + A+HL+ P+ + Y+
Sbjct: 591 GQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYI 650
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRK 567
+LS++Y+ +G ++VR + +K+I K
Sbjct: 651 MLSNVYAALGMWDSVSKVR--ETVKKIGK 677
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 209/461 (45%), Gaps = 71/461 (15%)
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
R+R + +L S +K G C + +M+ Y K +I+AR +FD
Sbjct: 15 RFRSIKNAKSLHSHIIKSGFCNH------------IFILNNMISVYSKCSSIIDARNMFD 62
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM-AFNSITLTILFEACGRFFRYR 185
+MP +N+V+WT MV + L+ M + N + + +ACG
Sbjct: 63 EMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVE 122
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G VH + + D DI+L N+++ MY + G + +A +VF + ++A SWN+LI GY
Sbjct: 123 LGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYA 182
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
G I++A +LF++MP D VSW + II+G
Sbjct: 183 KQGLIDDAMKLFDKMPEPDIVSWNS-------------------------------IIAG 211
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
V+N A R+ M K ++ ++ T SVL A + L G +IH +++K ES
Sbjct: 212 LVDNAS-SRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESS 270
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS-----YNSMISGFAQNGLGEEALNLF 420
++L+ +YS C + +A +IF + VS +NSM+SG NG EAL++
Sbjct: 271 CYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMI 330
Query: 421 RKMKDEGLVPNQITFLSVLSAC---NHVGLVEE--GFIYFKSMKTLYNIEPGPEHYACMV 475
M G+ + TF VL C +++ L + GF+ + + Y ++ + ++
Sbjct: 331 SHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFV----ITSGYELDCVVG--SILI 384
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPG----VWGALL-GAGR 511
DI + GS+ A+ L FE P W +L+ G R
Sbjct: 385 DIYAKQGSINNALRL-----FERLPDKDVVAWSSLITGCAR 420
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 169/369 (45%), Gaps = 62/369 (16%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
E D V ++D Y K+G + A +F+++P+K+VVAW++++ G + + F LF+
Sbjct: 374 ELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMD 433
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M G+ + ++I+ +AC ++ G QVH L + G++ + ++ ++I MY + G
Sbjct: 434 MIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGD 493
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSWTTMI 272
+++A +F +S+ D +SW S+I G NG EEA L +M P K ++ ++
Sbjct: 494 IEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNK--ITILGVL 551
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T G +E++ ++FN + + + ++ ++EEA + EM
Sbjct: 552 TACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEM---PF 608
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG--NVVDA 385
+P++ SS+L A + + + H++ + E DVS+ L ++Y+ G + V
Sbjct: 609 KPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPE-DVSVYIMLSNVYAALGMWDSVSK 667
Query: 386 YR-------------IFTNID------------------------------ERNIVSYNS 402
R IF I E ++VS+N+
Sbjct: 668 VRETVKKIGKKRAGKIFYEIPFKFYFMEHLHLGHAKQGLNGGVVKVIYPILEPDLVSWNN 727
Query: 403 MISGFAQNG 411
+I+G A N
Sbjct: 728 VIAGLADNA 736
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 141/283 (49%), Gaps = 22/283 (7%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
++ +H+H++K + + I N+++S+YSKC +++DA +F + RNIVS+ +M+S
Sbjct: 18 SIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVS 77
Query: 406 GFAQNGLGEEALNLFRKMKDEGL-VPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYN 463
+ + EAL+L+ +M + + PNQ + +VL AC V VE G +++ + +
Sbjct: 78 VLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLD 137
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
++ + ++D+ + GSL +A + + + +LG + L D KL
Sbjct: 138 VDIVLMN--ALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFD 195
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKR-------DGNRVRMKK-KLKRIRKSPGCS-WI 574
+ EPD + +++ L + G ++M + + K+ GCS +
Sbjct: 196 K---MPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDEL 252
Query: 575 ILKDKVHLFL--AGRKS---CLD-LKEIEVTLQTISKGTKEFD 611
+L ++H ++ +G +S C+ L ++ + + +S+ TK FD
Sbjct: 253 MLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFD 295
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/574 (32%), Positives = 316/574 (55%), Gaps = 44/574 (7%)
Query: 96 AMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
++ +V A GS+V Y + GRV EA +FD+MPE++V AW AM+ G + D L
Sbjct: 96 GLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTL 155
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
M G+A +++TL+ + C + +H + G ++ + N++I +YG+
Sbjct: 156 LGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGK 215
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG------- 262
LG + EA+ VF M+ RD V+WNS+IS G++ A LF M P
Sbjct: 216 LGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSL 275
Query: 263 ---------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
D ++ M+ ++ ++ + ++F+ +P++D
Sbjct: 276 ASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRD 335
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIH 354
V+W +I+G++ N EA R + +M + ++P Q T SVL A + L QG ++H
Sbjct: 336 VVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMH 395
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
A +K + DV + L+ LY+KCG +V+A +F ++ R+ +N++I+G +G G
Sbjct: 396 ALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGA 455
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
+AL+LF +M+ E + P+ +TF+S+L+AC+H GLV++G +F M+T+Y I P +HY CM
Sbjct: 456 KALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCM 515
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
VD+LGRAG L EA + I SM +P VWGALLGA R H N+++ K+A+Q+L EL+P++
Sbjct: 516 VDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENV 575
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS--CLD 592
YV++S++Y+ IGK + VR + + ++K+PG S + +K V +F +G ++
Sbjct: 576 GYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQ 635
Query: 593 LKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
+EI+ L + K + P + + L +E D
Sbjct: 636 HEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEED 669
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 219/521 (42%), Gaps = 85/521 (16%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISG 80
+ EA+ +F MP R+ ++ AM++G R +A L M D+V ++++
Sbjct: 118 VAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPM 177
Query: 81 YLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+ +G A + V+ ++ +++D Y K G + EA +F M +++V W
Sbjct: 178 CVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTW 237
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+++ + +LF M G+ + +TL L A + VH V R
Sbjct: 238 NSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRR 297
Query: 197 FGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
G+D DII GN+++ MY ++ +D A KVF + RD VSWN+LI+GY+ NG EA R
Sbjct: 298 RGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIR 357
Query: 256 LFERMPGKD--------FVS--------------------------------WTTMITGF 275
++ M + FVS T +I +
Sbjct: 358 IYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLY 417
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ G L +++ LF MP + W AII+G + +A F +M +++++P+ +T
Sbjct: 418 AKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFV 477
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L+A + ++QG S L +V +
Sbjct: 478 SLLAACSHAGLVDQG-------------------RSFFDLMQTVYGIVPIAK-------- 510
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
Y M+ + G +EA + M + P+ + ++L AC G VE G +
Sbjct: 511 ---HYTCMVDMLGRAGQLDEAFEFIQSMP---IKPDSAVWGALLGACRIHGNVEMGKV-- 562
Query: 456 KSMKTLYNIEP-GPEHYACMVDILGRAGSLAEAIDLINSMT 495
+ + L+ ++P +Y M ++ + G + +D + S+
Sbjct: 563 -ASQNLFELDPENVGYYVLMSNMYAKIGKW-DGVDAVRSLV 601
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 13/166 (7%)
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCGNVVDA 385
+RP+ T ++ A+ A+ +Q+HA +++ + +V SLV Y + G V +A
Sbjct: 65 LRPDSFTFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
YR+F + ER++ ++N+M+SG +N +A+ L +M EG+ + +T SVL C
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMC--- 178
Query: 446 GLVEEGFIYFKSMKTLYNIEPG--PEHYAC--MVDILGRAGSLAEA 487
V G + +Y ++ G E + C ++D+ G+ G L EA
Sbjct: 179 --VVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEA 222
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 151/404 (37%), Gaps = 97/404 (24%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM----- 97
AM+ + + A++++ N+P R D V N LI+GY++ G EA RI+ M
Sbjct: 310 AMVDMYAKMSKIDAAQKVFDNLPDR--DVVSWNTLITGYMQNGLANEAIRIYNDMHNHEG 367
Query: 98 -----------------------------------VEKDVVAWGSMVDGYCKKGRVIEAR 122
+ DV ++D Y K G+++EA
Sbjct: 368 LKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAM 427
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+F+ MP ++ W A++ G LF M++ + + +T L AC
Sbjct: 428 FLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHA- 486
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
GLV + +D++ T+YG + + M+ +
Sbjct: 487 ---------GLVDQGRSFFDLMQ-----TVYGIVPIAKHYTCMVDMLGRA---------- 522
Query: 243 GYVHNGEIEEAYRLFERMPGK-DFVSWTTMITGFSSKGNLE----KSIELFNMMPEKDDV 297
G+++EA+ + MP K D W ++ GN+E S LF + PE +V
Sbjct: 523 -----GQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPE--NV 575
Query: 298 TWTAIISGFVNNEQYEEAFRW-FIEMLRKDVRPNQLTLS---SVLSASAATATLNQGSQI 353
+ ++S Y + +W ++ +R VR L + S + + + G+Q
Sbjct: 576 GYYVLMS-----NMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQT 630
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSK---CGNVVDAYRIFTNIDE 394
H IQ L L +K G V D + +++E
Sbjct: 631 EPH------PQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEE 668
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 200/679 (29%), Positives = 346/679 (50%), Gaps = 57/679 (8%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVN 63
T+LI+ + I +A +F + ++ + ++ +I G+ ++G +F + +E +V
Sbjct: 180 TSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVC 239
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
SV S L+ +L+ G+ + + + + DV +D Y K +V R+
Sbjct: 240 PDKYVLSSVLSACLMLKFLEGGK-QIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRK 298
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD+M +KNVV+WT ++ G M+ D DLF+ M R G ++ T + +CG
Sbjct: 299 LFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVA 358
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+G QVH + D D + N +I MY + + +A KVF++M+ D VS+N++I G
Sbjct: 359 LEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEG 418
Query: 244 YVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIEL------------ 287
Y ++ EA LF M + + +++ +S +LE S ++
Sbjct: 419 YSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLD 478
Query: 288 -----------------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
F + +KD V WTA+ SG+ + EE+ + + +
Sbjct: 479 EFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQM 538
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
++PN+ T ++V++A++ A+L G Q H V+KM + D + N+LV +Y+K G++ +
Sbjct: 539 SRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEE 598
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A++ F + + ++ +NSMI+ +AQ+G E+AL +F M EGL PN +TF+ VLSAC+H
Sbjct: 599 AHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSH 658
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
GL++ GF +F SM + IEPG EHY CMV +LGRAG L EA + I M + VW
Sbjct: 659 TGLLDLGFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWR 717
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
+LL A R N++L AA+ + P + YV+LS++++ G + R+R K +
Sbjct: 718 SLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISG 777
Query: 565 IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLER 624
+ K PGCSWI + +++H F+A + D I + L + K F + + +
Sbjct: 778 VVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFGY------MANTDN 831
Query: 625 DWSYTADNIKRIKKFDWPK 643
YT+ +K + P+
Sbjct: 832 KQCYTSSQLKSPEILTTPQ 850
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 193/383 (50%), Gaps = 44/383 (11%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ D+ +++ Y K V A ++FD M KN+V W++MV Y + LF+
Sbjct: 71 KHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQ 130
Query: 159 -MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
MR N L + AC +F +Q+HGLV + G+ D+ + S+I Y +
Sbjct: 131 FMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHA 190
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSW--- 268
+D+A +F + + + +W ++I+GY G + + +LF++M P K +S
Sbjct: 191 CIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLS 250
Query: 269 --------------------------TTMITGF------SSKGNLEKSIELFNMMPEKDD 296
+M+ GF K L + +LF+ M +K+
Sbjct: 251 ACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGR--KLFDRMVDKNV 308
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+WT +I+G + N + +A F+EM R P+ +SVL++ + L +G Q+HA+
Sbjct: 309 VSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAY 368
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+K+N+++D ++N L+ +Y+KC ++ DA ++F + ++VSYN+MI G+++ EA
Sbjct: 369 AIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEA 428
Query: 417 LNLFRKMKDEGLVPNQITFLSVL 439
L+LFR+M+ P + F+S+L
Sbjct: 429 LDLFREMRLSLSSPTLLIFVSLL 451
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/567 (25%), Positives = 248/567 (43%), Gaps = 50/567 (8%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS--- 79
+ A ++F TM +N V++++M++ + EA L+V + L S
Sbjct: 90 VNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVR 149
Query: 80 GYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+ G A +I +V+ +DV S++D Y K + +AR +FD + K
Sbjct: 150 ACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFT 209
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT ++ GY K + LF M+ G + + L+ + AC G Q+H V
Sbjct: 210 WTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVL 269
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R G D+ + N I Y + + K+F M ++ VSW ++I+G + N +A
Sbjct: 270 RSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALD 329
Query: 256 LFERMP----GKDFVSWTTMITGFSSKGNLEK---------------------------- 283
LF M D T+++ S LEK
Sbjct: 330 LFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYA 389
Query: 284 -------SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
+ ++FN+M D V++ A+I G+ ++ EA F EM P L S
Sbjct: 390 KCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVS 449
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L SA+ L +QIH ++K + D ++L+ +YSKC V DA +F I +++
Sbjct: 450 LLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKD 509
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
IV + +M SG+ Q EE+L L++ ++ L PN+ TF +V++A +++ + G F
Sbjct: 510 IVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHG-QQFH 568
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
+ + P +VD+ ++GS+ EA S ++ W +++ H
Sbjct: 569 NQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWK-DTACWNSMIATYAQHGEA 627
Query: 517 DLA-KLAAQHLME-LEPDSATPYVVLS 541
+ A ++ +ME L+P+ T VLS
Sbjct: 628 EKALQVFEDMIMEGLKPNYVTFVGVLS 654
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 168/348 (48%), Gaps = 44/348 (12%)
Query: 189 QVHGLVSRFGFD-YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++H + FGF +DI L N+++ Y +L ++ ANK+F MS ++ V+W+S++S Y H+
Sbjct: 59 KIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHH 118
Query: 248 GEIEEAYRLFERM---------------------------PG-------------KDFVS 267
EA LF + P +D
Sbjct: 119 SHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYV 178
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T++I ++ ++ + LF+ + K TWT II+G+ + + + + F +M V
Sbjct: 179 CTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHV 238
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P++ LSSVLSA L G QIH +V++ + DVS+ N + Y KC V +
Sbjct: 239 CPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRK 298
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + ++N+VS+ ++I+G QN +AL+LF +M G P+ SVL++C +
Sbjct: 299 LFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVA 358
Query: 448 VEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+E+G ++ ++K NI+ ++D+ + SL +A + N M
Sbjct: 359 LEKGRQVHAYAIKV--NIDNDDFVKNGLIDMYAKCDSLTDARKVFNLM 404
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/486 (36%), Positives = 273/486 (56%), Gaps = 35/486 (7%)
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
R +F ++ N WTA++ GY F + L+ SMRR G+ S T T L +AC
Sbjct: 93 RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152
Query: 182 FRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G QVH G F D+ +GN++I MY
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMY--------------------------- 185
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
V G + +R+F+ M +D +SWT++I ++ GN+E + ELF+ +P KD V WT
Sbjct: 186 ----VKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWT 241
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH--AHVV 358
A+++G+ N + EA F M V+ +++TL V+SA A + + A
Sbjct: 242 AMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQS 301
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
S+V + ++L+ +Y+KCG+V DAY++F ++ERN+ SY+SMI GFA +GL A+
Sbjct: 302 GFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAME 361
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M + PN++TF+ VL+AC+H G+VE+G F M+ + + P +HYACMVD+L
Sbjct: 362 LFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLL 421
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L EA++L+ M P GVWGALLGA R H N D+A++AA HL ELEP+ Y+
Sbjct: 422 GRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYI 481
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK-VHLFLAGRKSCLDLKEIE 597
+LS++Y+ G+ D ++VR + K ++K+PGCSW+ K +H F AG S +EI+
Sbjct: 482 LLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIK 541
Query: 598 VTLQTI 603
L+ +
Sbjct: 542 QALEDL 547
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 129/235 (54%), Gaps = 6/235 (2%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N LI Y+K G R+F+ M+++DV++W S++ Y K G + A E+FD +P
Sbjct: 174 DLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLP 233
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF--FRYREG 187
K++VAWTAMV GY + + ++F M+ G+ + +TL + AC + +Y
Sbjct: 234 MKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANW 293
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
V+ S FG ++++G+++I MY + G +++A KVF M +R+ S++S+I G+ +
Sbjct: 294 VRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMH 353
Query: 248 GEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
G A LF+ M + V++ ++T S G +E+ +LF MM E V
Sbjct: 354 GLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVA 408
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 125/275 (45%), Gaps = 15/275 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M DR S+ ++I A ++ A E+F +PM++ V++ AM+TG+ + EA E+
Sbjct: 201 MLDRDVISWTSLIVAYAKVG-NMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEV 259
Query: 61 YVNMPARW--RDSVCSNALISGYLKVGRCEEAARIFEAMVE------KDVVAWGSMVDGY 112
+ M A D V +IS ++G + A + + + +VV +++D Y
Sbjct: 260 FERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMY 319
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
K G V +A ++F++M E+NV ++++M+ G+ +LF M + + N +T
Sbjct: 320 AKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFI 379
Query: 173 ILFEACGRFFRYREGVQVHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS- 230
+ AC +G Q+ ++ G ++ + GR G ++EA + MM
Sbjct: 380 GVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPM 439
Query: 231 KRDAVSWNSLISGYVHNGEIE----EAYRLFERMP 261
W +L+ +G + A LFE P
Sbjct: 440 NPHGGVWGALLGACRIHGNPDMAQIAASHLFELEP 474
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 327 VRPNQLTLSS-VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
VR Q L S ++S +NQ Q+HAH+ + +E + L+ +K +D
Sbjct: 31 VRQEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDP 90
Query: 386 YR--IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
Y +F ++ N + ++I G+A G E++ L+ M+ +G+ P TF ++L AC+
Sbjct: 91 YPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACS 150
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/561 (34%), Positives = 297/561 (52%), Gaps = 34/561 (6%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
RD+ +++L+ YL+ G +A + + M + VV W +++ + G A + ++M
Sbjct: 53 RDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERM 112
Query: 129 P----EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
E NV+ W +V G + D + M G ++ ++ A G
Sbjct: 113 RSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDV 172
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
G Q+HG V + G D + ++I MYG+ G DE +VF S D S N+L++G
Sbjct: 173 AVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGL 232
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
N ++ EA RLF ++FV + IEL + V+WT+I++
Sbjct: 233 SRNAQVSEALRLF-----REFVG---------------RGIEL-------NVVSWTSIVA 265
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
V N + EA F EM + + PN +T+ VL A A A L G H ++
Sbjct: 266 CCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHH 325
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D+ + ++LV +Y+KCG V DA IF + RN+VS+N+MI G+A +G E A+ LFR M+
Sbjct: 326 DIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQ 385
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
P+ +TF VL AC+ G EEG YF M+ + I P EHYACMV +LGRAG L
Sbjct: 386 SSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKL 445
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
+A D+IN M FEP +WG+LLG+ R H N+ LA++AA++L +LEP++A YV+LS++Y
Sbjct: 446 DDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIY 505
Query: 545 SVIGKKRDG-NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ K DG NR+R K ++K GCSWI +K+KVH+ LAG S + I L+ +
Sbjct: 506 AS-KKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHL 564
Query: 604 SKGTKEFDW-PKHDWSLLGLE 623
+ + + P D+ L +E
Sbjct: 565 TMEMRRLGFAPSTDYVLHDVE 585
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 129/274 (47%), Gaps = 8/274 (2%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAAR 92
+P VS A G V E YV D+ + ALI Y K GR +E R
Sbjct: 153 LPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVR 212
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEA----REIFDKMPEKNVVAWTAMVDGYMKVDC 148
+F+ DV + ++V G + +V EA RE + E NVV+WT++V ++
Sbjct: 213 VFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGR 272
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
+ DLF M+ G+ NS+T+ + A G H R GF +DI +G++
Sbjct: 273 DLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSA 332
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----D 264
++ MY + G + +A +F M R+ VSWN++I GY +GE E A RLF M D
Sbjct: 333 LVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPD 392
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
V++T ++ S G E+ FN M K ++
Sbjct: 393 LVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGIS 426
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 109/294 (37%), Gaps = 89/294 (30%)
Query: 7 ASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYV 62
AS NA++ L + N + EA +F R N VS+ +++ V+ G EA +L+
Sbjct: 223 ASCNALVAGL-SRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFR 281
Query: 63 NM----------------PA--------RWRDSVC-------------SNALISGYLKVG 85
M PA R + C +AL+ Y K G
Sbjct: 282 EMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCG 341
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
R +A IFEAM ++VV+W +M+ GY G
Sbjct: 342 RVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEA--------------------------- 374
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC--------GRFFRYREGVQVHGLVSRF 197
E+ LF SM+ + +T T + AC GR + + E HG+ R
Sbjct: 375 ----ENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSY-FNEMQHKHGISPRM 429
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEI 250
++T+ GR G +D+A + + M + D W SL+ +G +
Sbjct: 430 EHYA------CMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNV 477
>gi|357472867|ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507773|gb|AES88915.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/480 (38%), Positives = 285/480 (59%), Gaps = 13/480 (2%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR-GGMA 165
+++ Y G++ AR++FDK+P+ N+ W A++ + + ++F M+
Sbjct: 69 NLITLYTTCGQLSIARKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQK 128
Query: 166 FNSI-TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
NS+ + + +ACG G QVH LV + F+ D + +++I MY + G + +A K
Sbjct: 129 SNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARK 188
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGN 280
VF M +D V+ N+++SGY G EA L E M + V+W +I+GF+ K +
Sbjct: 189 VFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCD 248
Query: 281 LEKSIELFNMMPE----KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
E E+F +M E D V+WT+++SGFV N + EEAF F +ML P T+S+
Sbjct: 249 REMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISA 308
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L A A A + G +IH + + + +E D+ ++++LV +Y+KCG + +A +F + E+N
Sbjct: 309 LLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKN 368
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP--NQITFLSVLSACNHVGLVEEGFIY 454
V+ NSMI G+A +G EEA+ LF +M+ EG VP + +TF + L+AC+HVG +E G
Sbjct: 369 TVTMNSMIFGYANHGCCEEAIELFNQMEMEG-VPKLDHLTFTAALTACSHVGDIELGQRL 427
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
FK M+ Y IEP EHYACMVD+ GRAG L EA +I SM +P VWGALL A R H
Sbjct: 428 FKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLAACRNHG 487
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+++LA++AA+HL ELEP+SA ++LS LY+ G R++ + K ++RK G SWI
Sbjct: 488 HVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIKRRIKKGKLRKLQGLSWI 547
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 165/361 (45%), Gaps = 53/361 (14%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+ S+ALI Y K G +A ++F+ MV KD+VA ++V GY ++G EA + + M
Sbjct: 166 DAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMK 225
Query: 130 ---------------------------------------EKNVVAWTAMVDGYMKVDCFE 150
E +VV+WT+++ G+++ E
Sbjct: 226 LMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNE 285
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ FD F M G S T++ L AC R R G ++HG G + D+ + ++++
Sbjct: 286 EAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALV 345
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-----PGKDF 265
MY + GF+ EA +F M +++ V+ NS+I GY ++G EEA LF +M P D
Sbjct: 346 DMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDH 405
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFI 320
+++T +T S G++E LF +M EK + + ++ F + EEA+
Sbjct: 406 LTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIK 465
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M V+P+ ++L+A + H+ ++ ES + L SLY+ G
Sbjct: 466 SM---PVKPDLFVWGALLAACRNHGHVELAEVAAKHLSELEPES-AGNRLLLSSLYADAG 521
Query: 381 N 381
Sbjct: 522 T 522
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 117/236 (49%), Gaps = 33/236 (13%)
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWN----SLISGYVHNGEIEEAYRLFERMPGKD 264
+I Y + + K+ ++++ V +N +LI+ Y G++ A +LF+++P +
Sbjct: 35 LIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTN 94
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
W +I + G + ++E+F+ M +N+++ F
Sbjct: 95 IHRWIALIATCARCGFHDHALEVFSEMQT-------------LNDQKSNSVF-------- 133
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ SVL A G Q+H V+K + E D + ++L+ +YSKCG V D
Sbjct: 134 --------VIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRD 185
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
A ++F + +++V+ N+++SG+AQ GL EAL+L MK G+ PN +T+ +++S
Sbjct: 186 ARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALIS 241
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 171/422 (40%), Gaps = 92/422 (21%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F +P N + A+I R G A E++ M S +I LK
Sbjct: 83 ARKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKA- 141
Query: 86 RCEEAA-RIFEAMV---------EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
C RI+ V E D +++ Y K G V +AR++FD M K++VA
Sbjct: 142 -CGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVA 200
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
A+V GY + + L +M+ G+ N +T
Sbjct: 201 MNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTW------------------------ 236
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS----KRDAVSWNSLISGYVHNGEIE 251
N++I+ + + + +++F +M+ + D VSW S++SG+V N E
Sbjct: 237 -----------NALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNE 285
Query: 252 EAYRLFERM------P--------------------GK-------------DFVSWTTMI 272
EA+ F++M P GK D + ++
Sbjct: 286 EAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALV 345
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV-RPNQ 331
++ G + ++ LF MPEK+ VT ++I G+ N+ EEA F +M + V + +
Sbjct: 346 DMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDH 405
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVV-KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
LT ++ L+A + + G ++ + K +E + +V L+ + G + +AY I
Sbjct: 406 LTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIK 465
Query: 391 NI 392
++
Sbjct: 466 SM 467
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 20/262 (7%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYVN 63
++NA+I+ C EIF M + VS+ ++++GFV+ + EE +
Sbjct: 235 TWNALISGFAQK-CDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQN---FRNEEAFDA 290
Query: 64 MPARWRDSVC-SNALISGYLKVGRCEEAARIFEAM--------VEKDVVAWGSMVDGYCK 114
C ++A IS L E R + + VE D+ ++VD Y K
Sbjct: 291 FKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAK 350
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA-FNSITLTI 173
G + EAR +F KMPEKN V +M+ GY C E+ +LF M G+ + +T T
Sbjct: 351 CGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTA 410
Query: 174 LFEACGRFFRYREGVQVHGLVS-RFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSK 231
AC G ++ ++ ++ + + ++ ++GR G ++EA + SM K
Sbjct: 411 ALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVK 470
Query: 232 RDAVSWNSLISGYVHNGEIEEA 253
D W +L++ ++G +E A
Sbjct: 471 PDLFVWGALLAACRNHGHVELA 492
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHV-----VKMNMESDVSIQNSLVSLYSKCGN 381
+R + + ++ + +L QG ++HA + V+ N+ I ++L++LY+ CG
Sbjct: 25 LRSEPESYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNL-----IASNLITLYTTCGQ 79
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL--SVL 439
+ A ++F I + NI + ++I+ A+ G + AL +F +M+ + F+ SVL
Sbjct: 80 LSIARKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVL 139
Query: 440 SACNHVG 446
AC HVG
Sbjct: 140 KACGHVG 146
>gi|147828480|emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
Length = 841
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 201/547 (36%), Positives = 307/547 (56%), Gaps = 66/547 (12%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA 96
++ S+A I + G F EA LYV M RW + AL S R A R+
Sbjct: 65 DSFSWACAIRFSTQHGQFKEAFALYVQM-QRWGLWPTTFALSSALKACARI--AYRMGGL 121
Query: 97 MVEKDVVAWG------------SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
+ V +G ++VD YCK G + AR++FD+M E+NVV+W +M+ GY+
Sbjct: 122 SIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYL 181
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
K DL ++ R F+ I D+I
Sbjct: 182 KSG------DLVVAQR----VFDEIP-----------------------------QKDVI 202
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
NS+I+ Y R G M++A +F M +R+ SWN++ISGYV G+I+ A F+ MP +
Sbjct: 203 SWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMPQXN 262
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
VSW TMI+G+S G+++ + ELF+ + KD + + A+I+ + N + +EA + F ML
Sbjct: 263 NVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLN 322
Query: 325 KDV--RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
DV +P+++TL+SV+SA + L G I +++ ++ +E D + +L+ LY+KCG++
Sbjct: 323 PDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSI 382
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
AY +F + ++++V+Y +MI G NG +A+ LF +M D + PN ITF+ +L+A
Sbjct: 383 DKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNLITFIGLLTAY 442
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
NH GLVEEG+ F SMK YN+ P +HY MVD+LGRAG L EA++LI SM +P GV
Sbjct: 443 NHAGLVEEGYRCFTSMKK-YNLVPSVDHYGIMVDLLGRAGRLQEALELIKSMPMQPHAGV 501
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WGALL A R H N++ ++AAQH ELEPD+ +LS++Y+ G++ D +
Sbjct: 502 WGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYXSLLSNIYAS-GERWD--------DV 552
Query: 563 KRIRKSP 569
KR+RKSP
Sbjct: 553 KRLRKSP 559
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 166/307 (54%), Gaps = 15/307 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
MA+R S+N+M+ + + + A +F +P ++ +S+ +MI+G+ R G +A L
Sbjct: 165 MAERNVVSWNSMLAGYLKSG-DLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSL 223
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ NA+ISGY++ G + A F+AM + + V+W +M+ GY K G V
Sbjct: 224 FQQMPE--RNFASWNAMISGYVEFGDIDSARSFFDAMPQXNNVSWMTMISGYSKCGDVDS 281
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF--NSITLTILFEAC 178
A E+FD++ K+++ + AM+ Y + ++ LF +M + + +TL + AC
Sbjct: 282 ACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISAC 341
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ R G + + R G + D L +++ +Y + G +D+A ++F + K+D V++
Sbjct: 342 SQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYT 401
Query: 239 SLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEK------SIELF 288
++I G NG+ +A +LF+ M + +++ ++T ++ G +E+ S++ +
Sbjct: 402 AMILGCGINGKAIDAIKLFDEMVDAQIFPNLITFIGLLTAYNHAGLVEEGYRCFTSMKKY 461
Query: 289 NMMPEKD 295
N++P D
Sbjct: 462 NLVPSVD 468
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 171/411 (41%), Gaps = 79/411 (19%)
Query: 185 REGVQVHGLVSRFGFDY-DIILGNSIITMYGRLG--FMDEANKVFSMMSKRDAVSWNSLI 241
++ QVH L+ G + + IL I+ + V D+ SW I
Sbjct: 14 KQAKQVHALILIHGLSHLEPILARQILJSASNYSATVAQYVHSVLHHSKSPDSFSWACAI 73
Query: 242 SGYVHNGEIEEAYRLFERMP---------------------------------------- 261
+G+ +EA+ L+ +M
Sbjct: 74 RFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIHGQVQKFGFS 133
Query: 262 -GKDFVSWTTMITGFSSK-GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
G D + T + F K G++E + ++F+ M E++ V+W ++++G++ + A R F
Sbjct: 134 GGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVF 193
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES------------DVS 367
E+ +KDV ++ +S++S A + + + + + N S D+
Sbjct: 194 DEIPQKDV----ISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDID 249
Query: 368 IQNS---------------LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
S ++S YSKCG+V A +F + ++++ +N+MI+ +AQN
Sbjct: 250 SARSFFDAMPQXNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSR 309
Query: 413 GEEALNLFRKM--KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
+EAL LF M D + P+++T SV+SAC+ +G + G M+ L IE
Sbjct: 310 PKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRL-GIEMDGHL 368
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
++D+ + GS+ +A +L + + + +LG G +D KL
Sbjct: 369 ATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKL 419
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 12 MITALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PA 66
+ TAL++ C SI +A+E+F + ++ V+Y AMI G G +A +L+ M
Sbjct: 368 LATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQ 427
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA----WGSMVDGYCKKGRVIEAR 122
+ + + L++ Y G EE R F +M + ++V +G MVD + GR+ EA
Sbjct: 428 IFPNLITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDHYGIMVDLLGRAGRLQEAL 487
Query: 123 EIFDKMP-EKNVVAWTAMV 140
E+ MP + + W A++
Sbjct: 488 ELIKSMPMQPHAGVWGALL 506
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 337/661 (50%), Gaps = 73/661 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M RT+ S+N +++A + + E F +P R++VS+ MI G+ G +++A +
Sbjct: 75 MPLRTAFSWNTVLSAY-SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRV 133
Query: 61 YVNM------PARW------------------------------RDSV-CSNALISGYLK 83
+M P ++ R +V SN+L++ Y K
Sbjct: 134 MGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
G A +F+ MV +D+ +W +M+ + + G++ A F++M E+++V W +M+ G+
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 144 MKVDCFEDGFDLFLSMRRGGM-AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ D+F M R + + + TL + AC + G Q+H + GFD
Sbjct: 254 NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
I+ N++I+MY R G +E A RL E+
Sbjct: 314 GIVLNALISMYSRC-------------------------------GGVETARRLIEQRGT 342
Query: 263 KDFV--SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
KD +T ++ G+ G++ ++ +F + ++D V WTA+I G+ + Y EA F
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M+ RPN TL+++LS +++ A+L+ G QIH VK VS+ N+L+++Y+K G
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 381 NVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
N+ A R F I ER+ VS+ SMI AQ+G EEAL LF M EGL P+ IT++ V
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
SAC H GLV +G YF MK + I P HYACMVD+ GRAG L EA + I M EP
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
WG+LL A R H N+DL K+AA+ L+ LEP+++ Y L++LYS GK + ++R
Sbjct: 583 VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSL 619
K R++K G SWI +K KVH+F + + EI +T++ I K+ + S+
Sbjct: 643 MKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 702
Query: 620 L 620
L
Sbjct: 703 L 703
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 138/237 (58%), Gaps = 32/237 (13%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N+L++ Y G A +LF+ MP + SW T+++ +S +G+++ + E F+ +P++D V
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+WT +I G+ N QY +A R +M+++ + P Q TL++VL++ AAT + G ++H+ +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 358 VKMNMESDVSIQNSLVSLYSKCGN------VVD-------------------------AY 386
VK+ + +VS+ NSL+++Y+KCG+ V D A
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAM 232
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSAC 442
F + ER+IV++NSMISGF Q G AL++F KM +D L P++ T SVLSAC
Sbjct: 233 AQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/625 (31%), Positives = 327/625 (52%), Gaps = 73/625 (11%)
Query: 2 ADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
A R + ++N++++ + + + +A +FA MP R+AVS+ M+ G R G F++A + +
Sbjct: 93 ARRNAFTWNSLLS-MYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTF 151
Query: 62 VNM------PARWRD----------------------------SVC---SNALISGYLKV 84
++M P+++ S C +N+++ Y K
Sbjct: 152 LDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKC 211
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
G E A +FE M + +W +MV Y +GR+ A +F+ M E+++V+W A++ GY
Sbjct: 212 GDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYN 271
Query: 145 KVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
+ + F M M + T+T + AC + G Q+H + R G Y
Sbjct: 272 QNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPY-- 329
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+ I+ N+LIS Y +G +E A R+ ++
Sbjct: 330 --SSQIM---------------------------NALISTYAKSGSVETARRIMDKAVVA 360
Query: 264 DF--VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
D +S+T ++ G+ G+ +++ E+F++M +D + WTA+I G+ N Q +EA F
Sbjct: 361 DLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRS 420
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M+R PN TL++VLSA A+ A L G QIH ++ E VS+ N+++++Y++ G+
Sbjct: 421 MIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGS 480
Query: 382 VVDAYRIFTNIDERN-IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
V A R+F I R V++ SMI AQ+GLGE+A+ LF +M G+ P+++T++ V S
Sbjct: 481 VPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFS 540
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC H G +++G Y++ M + I P HYACMVD+L RAG L EA + I M P
Sbjct: 541 ACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDT 600
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
VWG+LL A R N DLA+LAA+ L+ ++PD++ Y L+++YS G+ D R+ +
Sbjct: 601 VVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLR 660
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLA 585
K K ++K G SW ++ KVH+F A
Sbjct: 661 KDKAVKKETGFSWTHVQSKVHVFGA 685
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 224/511 (43%), Gaps = 99/511 (19%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA 96
N +SY A V RG F+EA L+ ++P R++ N+L+S Y K GR +A +F
Sbjct: 65 NLLSYYA--RAGVGRGCFHEARRLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQ 122
Query: 97 MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF 156
M E+D V+W MV G + GR F D F
Sbjct: 123 MPERDAVSWTVMVVGLNRAGR-------------------------------FWDAVKTF 151
Query: 157 LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
L M G+A + LT + +C G +VH V + G + + NS++ MYG+
Sbjct: 152 LDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKC 211
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFS 276
G + A VF M R SWN+++S Y H G ++ A +FE M + VSW +I G++
Sbjct: 212 GDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYN 271
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G + +++ F+ M + + P++ T++S
Sbjct: 272 QNGLDDMALKFFSRM------------------------------LTASSMEPDEFTVTS 301
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI-------- 388
VLSA A L G Q+H+++++ M I N+L+S Y+K G+V A RI
Sbjct: 302 VLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVAD 361
Query: 389 -------------------------FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
F ++ R+++++ +MI G+ QNG +EA+ LFR M
Sbjct: 362 LNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSM 421
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
G PN T +VLSAC + + G I+ +++++L E ++ + R+G
Sbjct: 422 IRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQ--EQSVSVSNAIITVYARSG 479
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
S+ A + + + + W +++ A H
Sbjct: 480 SVPLARRVFDQICWRKETVTWTSMIVALAQH 510
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 37/146 (25%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNM------------------------------- 362
+ +L S + G IHAH VK +
Sbjct: 28 FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87
Query: 363 ------ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+ NSL+S+Y+K G + DA +F + ER+ VS+ M+ G + G +A
Sbjct: 88 DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDA 147
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSAC 442
+ F M EGL P+Q +VLS+C
Sbjct: 148 VKTFLDMVGEGLAPSQFMLTNVLSSC 173
>gi|2245038|emb|CAB10457.1| hypothetical protein [Arabidopsis thaliana]
gi|7268435|emb|CAB80955.1| hypothetical protein [Arabidopsis thaliana]
Length = 851
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 193/545 (35%), Positives = 300/545 (55%), Gaps = 74/545 (13%)
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK-KGRVI 119
Y+ P+ N +I+ ++ G + A R+F M K+ + W S++ G K R++
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EA ++FD++PE + ++ M+ Y++ + FE
Sbjct: 111 EAHQLFDEIPEPDTFSYNIMLSCYVR--------------------------NVNFEKAQ 144
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
FF R F D N++IT Y R G M++A ++F M +++ VSWN+
Sbjct: 145 SFF------------DRMPFK-DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF-NMMPEKDDVT 298
+ISGY+ G++E+A F+ P + V+WT MITG+ +E + +F +M K+ VT
Sbjct: 192 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISG+V N + E+ + F ML + +RPN LSS L T
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCTLT-------------- 297
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
SL+S+Y KCG + DA+++F + ++++V++N+MISG+AQ+G ++AL
Sbjct: 298 ------------SLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 345
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LFR+M D + P+ ITF++VL ACNH GLV G YF+SM Y +EP P+HY CMVD+L
Sbjct: 346 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 405
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L EA+ LI SM F P V+G LLGA R H N++LA+ AA+ L++L +A YV
Sbjct: 406 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 465
Query: 539 VLSDLYSVIGKKRDGNRV--RMKK----KLKRIRKSPGCSWIILKDKVHLFLAGRKSCLD 592
L+++Y+ + D RV RMK+ K++R+ K PG SWI +++KVH F + + +
Sbjct: 466 QLANIYASKNRWEDVARVRKRMKESNVVKVERV-KVPGYSWIEIRNKVHHFRSSDRIHPE 524
Query: 593 LKEIE 597
L I
Sbjct: 525 LDSIH 529
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 198/418 (47%), Gaps = 31/418 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + + ++N+++ + + + EA ++F +P + SY M++ +VR F +A+
Sbjct: 87 MRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSF 146
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP ++D+ N +I+GY + G E+A +F +M+EK+ V+W +M+ GY + G + +
Sbjct: 147 FDRMP--FKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEK 204
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A F P + VVAWTAM+ GYMK E +F M + N +T +
Sbjct: 205 ASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDM---TVNKNLVTWNAMISGYVE 261
Query: 181 FFRYREGVQVHGLVSRFGFDYD------IILG---NSIITMYGRLGFMDEANKVFSMMSK 231
R +G+++ + G + +LG S+I+MY + G + +A K+F +M K
Sbjct: 262 NSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCTLTSLISMYCKCGELGDAWKLFEVMKK 321
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIEL 287
+D V+WN++ISGY +G ++A LF M D++++ ++ + G + +
Sbjct: 322 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY 381
Query: 288 FNMM-------PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
F M P+ D +T ++ + EEA + M RP+ ++L A
Sbjct: 382 FESMVRDYKVEPQPDH--YTCMVDLLGRAGKLEEALKLIRSM---PFRPHAAVFGTLLGA 436
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+ ++++N ++ L ++Y+ D R+ + E N+V
Sbjct: 437 CRVHKNVELAEFAAEKLLQLNSQNAAGYVQ-LANIYASKNRWEDVARVRKRMKESNVV 493
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/525 (35%), Positives = 295/525 (56%), Gaps = 7/525 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y G R IFD++P+KNVV + M+ Y+ + D +F +M G+ +
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + +A G+Q+H V R G D ++ +GN +I+MYG+ G + EA +V
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSK--GNL 281
M RD VSWNSL++G NG+ ++A + + M D + +++ ++ N+
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNV 1245
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
E+F + K V+W +I+ ++NN EA F++M V P+ ++++SVL A
Sbjct: 1246 SFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 1305
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ L G +IH +VV+ ++ ++ ++N+L+ +Y+KCG + A +F + R++VS+
Sbjct: 1306 GDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWT 1365
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
SMIS + NG G +A++LF +M+D GL P+ I F+SVLSAC+H GL++EG YFK M
Sbjct: 1366 SMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEE 1425
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
I P EH+ CMVD+LGRAG + EA I M EP VWGALL A R + N+ + L
Sbjct: 1426 CKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLL 1485
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA L +L P+ + YV+LS++Y+ G+ D VR K K I+K PG S L ++VH
Sbjct: 1486 AADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVH 1545
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
FLAG +S K+I L + KE + P+ D +L +E +
Sbjct: 1546 TFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEE 1590
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 167/396 (42%), Gaps = 86/396 (21%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------------PARWRDSVCS- 74
IF +P +N V + MI +V ++ +A ++ NM P + S S
Sbjct: 1081 HIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSE 1140
Query: 75 ------------------------NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
N LIS Y K G EA R+ + M +DVV+W S+V
Sbjct: 1141 DLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVA 1200
Query: 111 GYCKKGRVIEA-------------------------------------REIFDKMPEKNV 133
G + G+ +A +E+F K+ K++
Sbjct: 1201 GCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSL 1260
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W M+ YM + D+FL M + ++I++ + ACG G ++H
Sbjct: 1261 VSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEY 1320
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V R +++L N++I MY + G ++ A +VF M RD VSW S+IS Y NG+ +A
Sbjct: 1321 VVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDA 1380
Query: 254 YRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIIS 304
LF RM D +++ ++++ S G L++ F +M E+ + + ++
Sbjct: 1381 VSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVD 1440
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
Q +EA+ + +M + PN+ ++LSA
Sbjct: 1441 LLGRAGQVDEAYGFIKQM---PMEPNERVWGALLSA 1473
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 34/262 (12%)
Query: 4 RTSASYNAMITALINNNCSIYEAF--EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
+ A A + + N C +F E+F + ++ VS+ MI ++ M EA +++
Sbjct: 1224 KPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIF 1283
Query: 62 VNMPARWRD----SVCSNALISGYLK---VGRCEEAARIFEAMVEK----DVVAWGSMVD 110
+ M D S+ S G L +GR RI E +V K +++ +++D
Sbjct: 1284 LQMEDHAVDPDAISIASVLPACGDLSALLLGR-----RIHEYVVRKRLQPNLLLENALID 1338
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K G + ARE+FD+M ++VV+WT+M+ Y D LF M+ G+ +SI
Sbjct: 1339 MYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIA 1398
Query: 171 LTILFEAC--------GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
+ AC GR++ ++ + +V R ++ + + + + GR G +DEA
Sbjct: 1399 FVSVLSACSHAGLLDEGRYY-FKLMTEECKIVPR--IEHFVCM----VDLLGRAGQVDEA 1451
Query: 223 NKVFSMMS-KRDAVSWNSLISG 243
M + + W +L+S
Sbjct: 1452 YGFIKQMPMEPNERVWGALLSA 1473
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 352 QIHAHV-VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
++H+ + + ++ S+ S+ L+ Y+ CG IF I ++N+V +N MI + N
Sbjct: 1045 KLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNN 1104
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH-----VGLVEEGFIYFKSMKTLYNIE 465
L +AL +F+ M G+ P+ T+ VL A + VG+ + + +
Sbjct: 1105 HLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVG 1164
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTHLNLD--LAKL 521
G ++ + G+ G L EA +++ M P V W +L+ + D L
Sbjct: 1165 NG------LISMYGKCGCLVEACRVLDZM---PCRDVVSWNSLVAGCARNGQFDDALEVC 1215
Query: 522 AAQHLMELEPDSAT 535
L+ L+PD+ T
Sbjct: 1216 KEMELLGLKPDAGT 1229
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMI--TGFVRRGMF 54
+A+++ S+N MI +NN+ EA +IF M +A+S A+++ G + +
Sbjct: 1255 LANKSLVSWNVMIAVYMNNSMPA-EAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLL 1313
Query: 55 YEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
YV + + NALI Y K G E A +F+ M +DVV+W SM+ Y
Sbjct: 1314 GRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGM 1373
Query: 115 KGRVIEAREIFDKM 128
G+ +A +F +M
Sbjct: 1374 NGKGRDAVSLFSRM 1387
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 322/584 (55%), Gaps = 40/584 (6%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG-------------------- 116
L+S Y G +E R+F+ M +K+V W MV Y K G
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 199
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
R A E+FDK+ +++V++W +M+ GY+ E G ++ M G+ + T+ +
Sbjct: 200 RPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
C G VH L + F+ I N+++ MY + G +D A +VF M +R+ VS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP 292
W S+I+GY +G + A +L ++M + D V+ T+++ + G+L+ ++ + +
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 379
Query: 293 ----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV----------RPNQLTLSSVL 338
E + A++ + E A F M+ KD+ +P+ T++ VL
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVL 439
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A A+ + L +G +IH ++++ SD + N+LV LY KCG + A +F I +++V
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 499
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+ MI+G+ +G G EA+ F +M+D G+ P++++F+S+L AC+H GL+E+G+ +F M
Sbjct: 500 SWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM 559
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
K +NIEP EHYACMVD+L R G+L++A + I ++ P +WGALL R + +++L
Sbjct: 560 KNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIEL 619
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
A+ A+ + ELEP+++ YV+L+++Y+ K + R+R K + +RK+PGCSWI +K
Sbjct: 620 AEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKG 679
Query: 579 KVHLFLAGRKSCL-DLKEIEVTLQTISKGTK-EFDWPKHDWSLL 620
KV+LF++G S K IE L+ + + K E +PK ++L+
Sbjct: 680 KVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALI 723
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 204/422 (48%), Gaps = 34/422 (8%)
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ V + A + + ++ E+ +L ++ + + T + + + C + +G +
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCKKSEL--ETKTYSSVLQLCAGLKSFTDGKK 120
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VH ++ D LG +++ Y G + E +VF M K++ WN ++S Y G+
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+E+ LF+ M K G K E + ELF+ + ++D ++W ++ISG+V+N
Sbjct: 181 FKESICLFKIMVEK----------GIEGK-RPESAFELFDKLCDRDVISWNSMISGYVSN 229
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
E + +M+ + + T+ SVL A + TL+ G +H+ +K + E ++
Sbjct: 230 GLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N+L+ +YSKCG++ A R+F + ERN+VS+ SMI+G+ ++G + A+ L ++M+ EG+
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVK 349
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
+ + S+L AC G ++ G +K N+E ++D+ + GS+ A
Sbjct: 350 LDVVAITSILHACARSGSLDNGKDVHDYIKA-NNMESNLFVCNALMDMYAKCGSMEAANS 408
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
+ ++M + W ++G EL+PDS T VL S+
Sbjct: 409 VFSTMVVKDIIS-WNTMIG-------------------ELKPDSRTMACVLPACASLSAL 448
Query: 550 KR 551
+R
Sbjct: 449 ER 450
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 192/403 (47%), Gaps = 47/403 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALI 78
AFE+F + R+ +S+ +MI+G+V G+ +Y M D SV
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
SG L +G+ + I ++ E+ + +++D Y K G + A +F+KM E+NVV+WT+
Sbjct: 264 SGTLSLGKAVHSLAI-KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY + + L M + G+ + + +T + AC R G VH +
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL-- 256
+ ++ + N+++ MY + G M+ AN VFS M +D +SWN++I GE++ R
Sbjct: 383 MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI------GELKPDSRTMA 436
Query: 257 -----------FERMPGKDFVSWTTMITGFSSKGNLEKSIE--------------LFNMM 291
ER GK+ + + G+SS ++ ++ LF+M+
Sbjct: 437 CVLPACASLSALER--GKEIHGY-ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
P KD V+WT +I+G+ + EA F EM + P++++ S+L A + + L QG
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 352 QIHAHVVK--MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
+ +++K N+E + +V L S+ GN+ AY +
Sbjct: 554 RFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETL 595
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 177/531 (33%), Positives = 291/531 (54%), Gaps = 36/531 (6%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
LK+G A + + +V MV Y G + + +F+ + E + + + +M+
Sbjct: 86 LKLGHQVHAHMLLRGLQPTALVG-SKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIR 144
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
Y + E + SM G + T + ++ G VHGL+ R G +
Sbjct: 145 AYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQF 204
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D+ + S+I +YG+ G EI +A ++F+ M
Sbjct: 205 DLYVATSLIILYGKCG-------------------------------EINDAGKVFDNMT 233
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+D SW ++ G++ G ++ ++ +F MP ++ V+WT +ISG+ + ++A F E
Sbjct: 234 IRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDE 293
Query: 322 MLRKD--VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
M+++D VRPN +T+ SVL A A +TL +G QIH +M + S+ S+ +L ++Y+KC
Sbjct: 294 MVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKC 353
Query: 380 GNVVDAYRIF--TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
G++VDA F N +E+N++++N+MI+ +A G G +A++ FR+M G+ P+ ITF
Sbjct: 354 GSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTG 413
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
+LS C+H GLV+ G YF M T Y+I P EHYAC+ D+LGRAG LAEA L+ M
Sbjct: 414 LLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMP 473
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
P +WG+LL A R H NL++A+ AA+ L LEP++ YV+LS++Y+ G+ ++ +++R
Sbjct: 474 AGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLR 533
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K + +KSPGCSWI + K H+FL G S KEI + L+ + + K
Sbjct: 534 AIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMK 584
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 119/230 (51%), Gaps = 8/230 (3%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D + +LI Y K G +A ++F+ M +DV +W +++ GY K G + A IF++MP
Sbjct: 205 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP 264
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR--GGMAFNSITLTILFEACGRFFRYREG 187
+N+V+WT M+ GY + + LF M + G+ N +T+ + AC + G
Sbjct: 265 WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG 324
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK--RDAVSWNSLISGYV 245
Q+H L R G + + + ++ MY + G + +A F +++ ++ ++WN++I+ Y
Sbjct: 325 RQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYA 384
Query: 246 HNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
G +A F M D +++T +++G S G ++ ++ FN M
Sbjct: 385 SYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM 434
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 15/266 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R +S+NA++ + C I A IF MP RN VS+ MI+G+ + G+ +A L
Sbjct: 232 MTIRDVSSWNALLAGYTKSGC-IDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSL 290
Query: 61 YVNMPARWRDSVCSN-----ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG---- 111
+ M + V N +++ ++ E +I E + + S++
Sbjct: 291 FDEM-VKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 349
Query: 112 YCKKGRVIEAREIFDKM--PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI 169
Y K G +++AR FDK+ EKN++AW M+ Y F M + G+ + I
Sbjct: 350 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 409
Query: 170 TLTILFEACGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
T T L C G++ + + + + + + + + GR G + EA+K+
Sbjct: 410 TFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGE 469
Query: 229 MSKRDAVS-WNSLISGYVHNGEIEEA 253
M S W SL++ + +E A
Sbjct: 470 MPMPAGPSIWGSLLAACRKHRNLEMA 495
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
++ L P L+ + V L G Q+HAH++ ++ + + +V+ Y+
Sbjct: 58 LLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYAS 117
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
G++ + +F I E + + +NSMI +A+ G E + + M G + TF V
Sbjct: 118 SGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFV 177
Query: 439 LSA 441
L +
Sbjct: 178 LKS 180
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 338/616 (54%), Gaps = 23/616 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYE-AFEIFATMPMRNAVSYAAMITGFVR----RGMFY 55
M R ++N ++ ++N +E A E+F M A +Y + + ++ + F
Sbjct: 49 MPKRDDLAWNEIV--MVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFA 106
Query: 56 EAEELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY 112
E +++ + + S+C N+LI Y + G+ E + ++F +M ++++ +W S++ Y
Sbjct: 107 EGRQIHGYVLRLGLESNVSMC-NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSY 165
Query: 113 CKKGRVIEAREIFDKMP----EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
K G V +A + D+M + ++V W +++ GY +D + M+ G+ ++
Sbjct: 166 TKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPST 225
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
+++ L +A + G +HG + R YD+ + ++I MY + G++ A VF M
Sbjct: 226 SSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDM 285
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKS 284
M ++ V+WNSL+SG + +++A L RM + D ++W ++ +G+++ G EK+
Sbjct: 286 MDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKA 345
Query: 285 IELFNMMPEK----DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+++ M EK + V+WTAI SG N + A + FI+M + V PN T+S++L
Sbjct: 346 LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+ L+ G ++H ++ N+ D + +LV +Y K G++ A IF I +++ S+
Sbjct: 406 LGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASW 465
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
N M+ G+A G GEE + F M + G+ P+ ITF SVLS C + GLV+EG+ YF M++
Sbjct: 466 NCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
Y I P EH +CMVD+LGR+G L EA D I +M+ +P +WGA L + + H +L+LA+
Sbjct: 526 RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAE 585
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
+A + L LEP ++ Y+++ +LYS + + D R+R + R+R SWI + V
Sbjct: 586 IAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTV 645
Query: 581 HLFLAGRKSCLDLKEI 596
H+F A K+ D +I
Sbjct: 646 HIFYAEGKTHPDEGDI 661
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 180/351 (51%), Gaps = 38/351 (10%)
Query: 116 GRVIE---AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
GR + A ++FD+MP+++ +AW +V ++ +E +LF M+ G T+
Sbjct: 34 GRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMV 93
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
L + C + EG Q+HG V R G + ++ + NS+I MY R G ++ + KVF+ M R
Sbjct: 94 KLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR 153
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELF 288
+ SWNS++S Y G +++A L + M D V+W ++++G++SKG + +I +
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
M I+G ++P+ ++SS+L A A L
Sbjct: 214 KRMQ----------IAG---------------------LKPSTSSISSLLQAVAEPGHLK 242
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G IH ++++ + DV ++ +L+ +Y K G + A +F +D +NIV++NS++SG +
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
L ++A L +M+ EG+ P+ IT+ S+ S +G E+ MK
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK 353
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 112/199 (56%), Gaps = 1/199 (0%)
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+LF+ MP++DD+ W I+ + + +E+A F EM + T+ +L +
Sbjct: 44 KLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKE 103
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+G QIH +V+++ +ES+VS+ NSL+ +YS+ G + + ++F ++ +RN+ S+NS++S
Sbjct: 104 GFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
+ + G ++A+ L +M+ GL P+ +T+ S+LS GL ++ K M+ + ++
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ-IAGLK 222
Query: 466 PGPEHYACMVDILGRAGSL 484
P + ++ + G L
Sbjct: 223 PSTSSISSLLQAVAEPGHL 241
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/629 (30%), Positives = 330/629 (52%), Gaps = 53/629 (8%)
Query: 26 AFEIFATMPMR-NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
A ++F MP + + VS+ +MI+ + G EA L+ M + S+ N + +
Sbjct: 234 ARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQ---KASLAPNTY-TFVAAL 289
Query: 85 GRCEEAARIFEAMVEK----------DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
CE+++ I + M +V +++ Y + G++ EA IF M + + +
Sbjct: 290 QACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTI 349
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W +M+ G+++ + + + MR G + + + + A R G+Q+H
Sbjct: 350 SWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYA 409
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G D D+ +GNS++ MY + M + +F M +D VSW ++I+G+ NG A
Sbjct: 410 MKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRAL 469
Query: 255 RLFE--------------------------------------RMPGKDFVSWTTMITGFS 276
LF R D V ++ +
Sbjct: 470 ELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYG 529
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
GN++ + +F ++ KD V+WT++IS +V+N EA F M V P+ ++L S
Sbjct: 530 ECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVS 589
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+LSA+A+ + L +G +IH +++ + S+ ++LV +Y++CG + + +F I ++
Sbjct: 590 ILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKD 649
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+V + SMI+ + +G G A++LFR+M+DE + P+ I F++VL AC+H GL+ EG + +
Sbjct: 650 LVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLE 709
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
SMK Y +EP PEHYAC+VD+LGRA L EA + M EP VW ALLGA + H N
Sbjct: 710 SMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNK 769
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+L ++AAQ L+E++P++ YV++S++YS + +D VRM+ K ++K+PGCSWI +
Sbjct: 770 ELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEV 829
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
+KVH F+A KS EI L I++
Sbjct: 830 GNKVHTFMARDKSHPQSYEIYSKLSQITE 858
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/528 (28%), Positives = 252/528 (47%), Gaps = 72/528 (13%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-SVCSNALI--- 78
+ +A ++F MP + ++ AMI +V G + ELY M C+ I
Sbjct: 130 LVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKA 189
Query: 79 SGYLK---VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVV 134
G LK G I E V VA S+V Y K + AR++FD+MPEK +VV
Sbjct: 190 CGLLKDRRYGAEVHGLAIKEGYVSIVFVA-NSIVGMYTKCNDLNGARQLFDRMPEKEDVV 248
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W +M+ Y + LF M++ +A N+ T +AC ++G+ +H V
Sbjct: 249 SWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATV 308
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ + ++ + N++I MY R G M EA +F M D +SWNS++SG+V NG EA
Sbjct: 309 LKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEAL 368
Query: 255 RLFERM----PGKDFVSWTTMITGFSSKGNLEKSIE------------------------ 286
+ + M D V+ ++I + GN ++
Sbjct: 369 QFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMY 428
Query: 287 -----------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+F+ MP+KD V+WT II+G N + A F E+ + + + + +S
Sbjct: 429 AKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMIS 488
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L A + ++ +IH+++++ + SD+ +QN +V +Y +CGNV A R+F I+ +
Sbjct: 489 SILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFK 547
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----------H 444
++VS+ SMIS + NGL EAL LF MK+ G+ P+ I+ +S+LSA H
Sbjct: 548 DVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIH 607
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
L+ +GF+ S+ + +VD+ R G+L ++ ++ N
Sbjct: 608 GFLIRKGFVLEGSLAST------------LVDMYARCGTLEKSRNVFN 643
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 231/472 (48%), Gaps = 57/472 (12%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G +++A ++FD MP K + W AM+ Y+ +L+ MR G+ ++ T
Sbjct: 124 YGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTF 183
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM-S 230
+ +ACG R G +VHGL + G+ + + NSI+ MY + ++ A ++F M
Sbjct: 184 PCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPE 243
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT--------------------- 269
K D VSWNS+IS Y NG+ EA RLF M T
Sbjct: 244 KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMF 303
Query: 270 ------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
+I ++ G + ++ +F M + D ++W +++SGFV N
Sbjct: 304 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 363
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
Y EA +++ EM +P+ + + S+++ASA + G QIHA+ +K ++SD+ + NS
Sbjct: 364 YHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNS 423
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
LV +Y+K ++ IF + ++++VS+ ++I+G AQNG AL LFR+++ EG+ +
Sbjct: 424 LVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLD 483
Query: 432 QITFLSVLSACNHVGLVE-----EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+ S+L AC+ + L+ +I K + L ++ G +VD+ G G++
Sbjct: 484 VMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLV-LQNG------IVDVYGECGNVDY 536
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME---LEPDSAT 535
A + + F+ W +++ H L L HLM+ +EPDS +
Sbjct: 537 AARMFELIEFKDVVS-WTSMISC-YVHNGLANEALELFHLMKETGVEPDSIS 586
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 175/356 (49%), Gaps = 43/356 (12%)
Query: 147 DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LVSRFGFDYDIIL 205
+ F+ DLF + + + ++L E CG EG QVH +++ + L
Sbjct: 58 EAFQSLTDLFANQSPSQFSLDEAYSSVL-ELCGSKKALSEGQQVHAHMITSNALFNSVFL 116
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----- 260
++ MYG+ G + +A K+F M + +WN++I YV NGE + L+ M
Sbjct: 117 STRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGI 176
Query: 261 -------PG--------KD------------------FVSWTTMITGFSSKGN-LEKSIE 286
P KD V I G +K N L + +
Sbjct: 177 PLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQ 236
Query: 287 LFNMMPEKDDV-TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
LF+ MPEK+DV +W ++IS + +N Q EA R F EM + + PN T + L A ++
Sbjct: 237 LFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSS 296
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+ QG IHA V+K + +V + N+L+++Y++ G + +A IF N+D+ + +S+NSM+S
Sbjct: 297 FIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLS 356
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT 460
GF QNGL EAL + +M+D G P+ + +S+++A G G I+ +MK
Sbjct: 357 GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKN 412
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 118/228 (51%), Gaps = 4/228 (1%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T ++ + G L + +LF+ MP K TW A+I +V N + + + EM +
Sbjct: 118 TRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIP 177
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ T +L A G+++H +K S V + NS+V +Y+KC ++ A ++
Sbjct: 178 LDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQL 237
Query: 389 FTNIDER-NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
F + E+ ++VS+NSMIS ++ NG EAL LF +M+ L PN TF++ L AC
Sbjct: 238 FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSF 297
Query: 448 VEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+++G FI+ +K+ Y I + ++ + R G + EA ++ +M
Sbjct: 298 IKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAANIFYNM 343
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/646 (30%), Positives = 329/646 (50%), Gaps = 57/646 (8%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
+ + +L + SI EA +F + + Y M+ G+ + A M R+
Sbjct: 83 FQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRM--RY 140
Query: 69 RD------------SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
D VC + + LK G+ E ++ +V A +V+ Y K
Sbjct: 141 DDVKPVVYNFTYLLKVCGD---NADLKRGK-EIHGQLITNSFAANVFAMTGVVNMYAKCR 196
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
++ +A ++FD+MPE+++V+W ++ G+ + + +L L M+ G +SITL +
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLP 256
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
A G +HG R GF + + ++ MY + G ++ A +F M ++ VS
Sbjct: 257 AAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS 316
Query: 237 WNSLISGYVHNGEIEEAYRLFERM------P----------------------------- 261
WNS++ GYV NGE E+A +FE+M P
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376
Query: 262 ----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
G D ++I+ +S ++ + ++FN + + V+W A+I G+ N + EA
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALN 436
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F EM ++P+ T+ SV+ A A + IH +++ ++ ++ + +LV +YS
Sbjct: 437 CFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYS 496
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
KCG + A ++F I +R+++++N+MI G+ +GLG AL+LF KMK + PN IT+LS
Sbjct: 497 KCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLS 556
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
V+SAC+H GLV+EG +FKSMK Y +EP +HY MVD+LGRAG + EA D I +M
Sbjct: 557 VISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPIS 616
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
P V+GA GA + H N+++ + AA+ L EL PD +V+L+++Y+ K VR
Sbjct: 617 PGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVR 676
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ K ++K+PGCS + L+++VH F +G + K I L+ +
Sbjct: 677 KTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEEL 722
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 158/328 (48%), Gaps = 42/328 (12%)
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+L E C +E Q+ LV + G + + +++++ + G ++EA +VF + +
Sbjct: 54 VLLELCTSM---KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDK 110
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDF- 265
+++++ GY N +E A RM GK+
Sbjct: 111 LDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIH 170
Query: 266 ------------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+ T ++ ++ ++ + ++F+ MPE+D V+W II+GF N +
Sbjct: 171 GQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAK 230
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+A + M + RP+ +TL +VL A+A L G IH + ++ V+I +L
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+YSKCG+V A IF +D++ +VS+NSM+ G+ QNG E+A+ +F KM +EG+ P +
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTL 461
T + L AC +G +E G K + L
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQL 378
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 181/601 (30%), Positives = 318/601 (52%), Gaps = 73/601 (12%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N LI+ Y K+G + A +F+ + + ++ +W +++ Y K G + + + +FD MP +VV
Sbjct: 44 NNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVV 103
Query: 135 AWTAMVDGYMKVDCFEDGFDLF-LSMRRGGMAFNSITL-TILFEACGRFFRYREGVQVHG 192
+W +++ GY + ++ + ++ G + N IT T+L + R F G Q+HG
Sbjct: 104 SWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGF-VDLGRQIHG 162
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM------------------------ 228
+ +FG+ + +G+ ++ MY + GF+++AN++F
Sbjct: 163 QIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVE 222
Query: 229 -------MSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------- 260
M ++D++SW ++I+G NG +EA F+ M
Sbjct: 223 AEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGG 282
Query: 261 -----PGKDFVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
GK ++ + ++ + N++ + +F M K+ ++WTA+
Sbjct: 283 FLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAM 342
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
+ G+ N EEA R F +M R ++ P+ TL SV+S+ A A+L +G+Q H + +
Sbjct: 343 LVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGL 402
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
V++ N+L++LY KCG++ A+++F + R+ VS+ +++SG+AQ G E ++LF
Sbjct: 403 ICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFET 462
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
M G+VP+ +TF+ VLSAC+ GLVE+G+ YF+ M + I P P+HY CM+D+L RAG
Sbjct: 463 MLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAG 522
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L EA + IN M F P W LL + R + NL++ K AA+ L +LEP + Y++LS
Sbjct: 523 RLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSS 582
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQT 602
+Y+ GK D ++R + ++K PG SWI K+KVH+F A +S +I L++
Sbjct: 583 IYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLES 642
Query: 603 I 603
+
Sbjct: 643 L 643
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 231/488 (47%), Gaps = 73/488 (14%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
RI + + + ++++ Y K G + AR +FD +P+ N+ +W ++ Y K+ +
Sbjct: 29 CRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQ 88
Query: 151 DGFDLFLSM--------------------------------RRGGMAFNSITL-TILFEA 177
D +F SM + G + N IT T+L +
Sbjct: 89 DMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILS 148
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
R F G Q+HG + +FG+ + +G+ ++ MY + GF+++AN++F + +++ V +
Sbjct: 149 SNRGF-VDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVY 207
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N++I+G + I EA +LF+ MP KD +SWTT+ITG + G +++++ F M
Sbjct: 208 NTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMG----- 262
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
I GF +Q T SVL+A L++G QIHA++
Sbjct: 263 -----IEGFC---------------------MDQFTFGSVLTACGGFLALDEGKQIHAYI 296
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
++ + + ++ + ++L+ +Y KC NV A +F + +N++S+ +M+ G+ QNG EEA+
Sbjct: 297 IRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAV 356
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
+F M+ + P+ T SV+S+C ++ +EEG F + ++ +
Sbjct: 357 RIFCDMQRNEIHPDDFTLGSVISSCANLASLEEG-AQFHGQALASGLICFVTVSNALITL 415
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPDS 533
G+ GSL A L + M W AL+ G+ + + L + H + PD
Sbjct: 416 YGKCGSLEHAHQLFHEMKIRDEVS-WTALVSGYAQFGKANETISLFETMLAH--GIVPDG 472
Query: 534 ATPYVVLS 541
T VLS
Sbjct: 473 VTFVGVLS 480
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 143/294 (48%), Gaps = 61/294 (20%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++H + R + + L N++I YG+LG + A VF + + + SWN+L+S Y G
Sbjct: 26 KLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLG 85
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
+++ R+F+ MP D VSW ++++G++ G + +S+ ++NMM + V
Sbjct: 86 YLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNL--------- 136
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
N++T S++L S+ ++ G QIH + K +S + +
Sbjct: 137 ---------------------NRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFV 175
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM------------------------- 403
+ LV +Y+K G + DA RIF I E+NIV YN+M
Sbjct: 176 GSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDS 235
Query: 404 ------ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
I+G QNGL +EA++ F++M EG +Q TF SVL+AC ++EG
Sbjct: 236 ISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEG 289
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 32/135 (23%)
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN------------ 396
Q ++H +++ + + N+L++ Y K G++ +A +F +I + N
Sbjct: 23 QVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYS 82
Query: 397 -------------------IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP-NQITFL 436
+VS+NS++SG+A NGL E++ ++ M +G V N+ITF
Sbjct: 83 KLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFS 142
Query: 437 SVLSACNHVGLVEEG 451
++L ++ G V+ G
Sbjct: 143 TMLILSSNRGFVDLG 157
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 198/645 (30%), Positives = 328/645 (50%), Gaps = 53/645 (8%)
Query: 30 FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-------PARWRDSVCSNALISGYL 82
F +P ++ ++ +MI+ +V G F+EA + + P + A G L
Sbjct: 174 FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA--CGTL 231
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
GR + F+ + +V S++ Y + G AR +FD MP +++ +W AM+ G
Sbjct: 232 VDGR-KIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 290
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
++ D+ MR G+ N +T+ + C + + +H V + G ++D
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-- 260
+ + N++I MY + G +++A K F M D VSWNS+I+ Y N + A+ F +M
Sbjct: 351 LFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQL 410
Query: 261 ----PG----------------------------------KDFVSWTTMITGFSSKGNLE 282
P +D V ++ ++ G L+
Sbjct: 411 NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLD 470
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSAS 341
+ ++F ++P KD ++W +I+G+ N EA + M K++ PNQ T S+L A
Sbjct: 471 SAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 530
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
A L QG +IH V+K N+ DV + L+ +Y KCG +VDA +F + + + V++N
Sbjct: 531 AHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWN 590
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
++IS +G E+ L LF +M DEG+ P+ +TF+S+LSAC+H G VEEG F+ M+
Sbjct: 591 AIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE- 649
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I+P +HY CMVD+LGRAG L A D I M +P +WGALLGA R H N++L K
Sbjct: 650 YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKF 709
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
A+ L E++ + YV+LS++Y+ +GK ++VR + + ++K+PG S I + KV
Sbjct: 710 ASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVD 769
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
+F G +S KEI L+ ++ K + P + + L +E D
Sbjct: 770 VFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEED 814
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/535 (26%), Positives = 260/535 (48%), Gaps = 56/535 (10%)
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
+C A + V+ ++ +V+ Y G V +R FD++P+K+V AW +M+ Y+
Sbjct: 135 AKCLHALLVVAGKVQSIFIS-TRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193
Query: 145 KVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
F + F + + + T + +ACG +G ++H + GF +++
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRKIHCWAFKLGFQWNV 250
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE--RMP 261
+ S+I MY R GF A +F M RD SWN++ISG + NG +A + + R+
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310
Query: 262 G--KDFVSWTT-----------------------------------MITGFSSKGNLEKS 284
G +FV+ + +I ++ GNLE +
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+ F M D V+W +II+ + N+ A +F++M +P+ LTL S+ S A +
Sbjct: 371 RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430
Query: 345 ATLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+H +++ + DV I N++V +Y+K G + A+++F I ++++S+N++
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTL 490
Query: 404 ISGFAQNGLGEEALNLFRKMKD-EGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTL 461
I+G+AQNGL EA+ +++ M++ + ++PNQ T++S+L A HVG +++G I+ + +KT
Sbjct: 491 ITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT- 549
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD-LAK 520
N+ C++D+ G+ G L +A+ L + E W A++ H + + K
Sbjct: 550 -NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAEKTLK 607
Query: 521 LAAQHLME-LEPDSATPYVVLSDLYSVIGKKRDGN---RVRMKKKLKRIRKSPGC 571
L + L E ++PD T +V L S G +G R+ + +K K GC
Sbjct: 608 LFGEMLDEGVKPDHVT-FVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC 661
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 193/433 (44%), Gaps = 79/433 (18%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M R S+NAMI+ LI N + +A ++ M + N V+ +++ + G
Sbjct: 276 MPFRDMGSWNAMISGLIQNG-NAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIST 334
Query: 57 AE--ELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
A LYV D SNALI+ Y K G E+A + F+ M DVV+W S++ Y
Sbjct: 335 AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAY-- 392
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
E+N TA GF F+ M+ G + +TL L
Sbjct: 393 ---------------EQNDDPVTA------------HGF--FVKMQLNGFQPDLLTLVSL 423
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + VHG + R G+ D+++GN+++ MY +LG +D A+KVF ++ +D
Sbjct: 424 ASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKD 483
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM-PGKDFV----SWTTMITGFSSKGNLEK----- 283
+SWN+LI+GY NG EA +++ M K+ + +W +++ ++ G L++
Sbjct: 484 VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIH 543
Query: 284 ------------------------------SIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
++ LF +P++ VTW AIIS + E
Sbjct: 544 GRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAE 603
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+ + F EML + V+P+ +T S+LSA + + + +G + + ++ + +V
Sbjct: 604 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMV 663
Query: 374 SLYSKCGNVVDAY 386
L + G + AY
Sbjct: 664 DLLGRAGYLEMAY 676
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 267/443 (60%), Gaps = 1/443 (0%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M + ++ S T + L +AC G VHG + ++GFD + + +++ YG G
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
+ EA +VF MS+RD +W ++IS + G++ A +LF+ MP ++ SW MI G+S
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRL 120
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
N+E + LF+ MP +D ++WT +I+ + N+Q+ EA F EM + P+++T+++++
Sbjct: 121 RNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATII 180
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA A L+ G +IH + ++M + DV I ++L+ +Y+KCG++ + +F + ++N+
Sbjct: 181 SACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLF 240
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
+NS+I G A +G EEAL +F +M+ E + PN +TF+SVL AC H GLVEEG F SM
Sbjct: 241 CWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSM 300
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
++I P EHY CMVD+LG+AG L +A++L+ SM EP +WGALLG + H NL +
Sbjct: 301 SRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKI 360
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK-KKLKRIRKSPGCSWIILK 577
A++A LEP+++ Y +L ++Y+ + + + +R K+L + SPG SWI +
Sbjct: 361 AQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIEMD 420
Query: 578 DKVHLFLAGRKSCLDLKEIEVTL 600
K+H F A KS L EI L
Sbjct: 421 RKIHQFAASDKSHLASDEIYTLL 443
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 112/218 (51%), Gaps = 2/218 (0%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV 102
A++ + G EA ++ M R D +IS + + G A ++F+ M ++
Sbjct: 50 ALVDFYGNAGKIVEARRVFDEMSER--DVFAWTTMISVHARTGDMSSARQLFDEMPVRNT 107
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
+W +M+DGY + V A +F +MP +++++WT M+ Y + F + +F M+
Sbjct: 108 ASWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTN 167
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G+ + +T+ + AC G ++H GFD D+ +G+++I MY + G +D++
Sbjct: 168 GIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKS 227
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
VF + K++ WNS+I G +G EEA +F RM
Sbjct: 228 LVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRM 265
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 9/251 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R +AS+NAMI + ++ A +F+ MP R+ +S+ MI + + F EA +
Sbjct: 102 MPVRNTASWNAMIDGY-SRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAV 160
Query: 61 YVNMPARW--RDSVCSNALISGYLKVGRCEEAARI----FEAMVEKDVVAWGSMVDGYCK 114
+ M D V +IS +G + I E + DV +++D Y K
Sbjct: 161 FNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAK 220
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + ++ +F K+ +KN+ W ++++G E+ +F M+R + N +T +
Sbjct: 221 CGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISV 280
Query: 175 FEACGRFFRYREGVQVHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEANK-VFSMMSKR 232
AC EG + +SR F +I ++ + G+ G +++A + V SM +
Sbjct: 281 LGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEP 340
Query: 233 DAVSWNSLISG 243
++V W +L+ G
Sbjct: 341 NSVIWGALLGG 351
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 201/613 (32%), Positives = 315/613 (51%), Gaps = 71/613 (11%)
Query: 2 ADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
A S S N M++ + N I A ++F MP + VSY MI GFV+ G F EA E++
Sbjct: 115 ATLDSVSCNIMVSGYVRNG-QIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVF 173
Query: 62 VNMPARW---RD-------SVCSNA---------------------------LISGYLKV 84
+M + D S CS+ L+ Y
Sbjct: 174 KDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLC 233
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
EA R+F+ M E+++V W M++GY K G V EARE+FD + +K+V++W M+DGY+
Sbjct: 234 SGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYI 293
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
+ + +++ +M + G N + + L ACGR +G Q+HG V + GFD
Sbjct: 294 QKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNF 353
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
+ +II Y G MD A F + K SWN+L +G
Sbjct: 354 IQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAG--------------------- 392
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
F G ++ +++ F+ M +D +W+ +ISG+ +E + A F +ML
Sbjct: 393 ----------FIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLA 442
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
++PN++T+ SV SA A TL +G H ++ ++ + +++ +L+ +Y+KCG++
Sbjct: 443 GGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINS 502
Query: 385 AYRIFTNI-DERNIVS-YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A + F I DE + VS +N++I G A +G L +F M+ + PN ITF+ VLSAC
Sbjct: 503 ALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSAC 562
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
H GLVE G FK+MK+ YN+EP +HY CM+DILGRAG L EA ++I SM E +
Sbjct: 563 CHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVI 622
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WG LL A RTH N+++ + AA++L L P V+LS++Y+ GK + + VR +
Sbjct: 623 WGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQG 682
Query: 563 KRIRKSPGCSWII 575
+ + + PG S +
Sbjct: 683 QTMDREPGYSGFV 695
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 235/501 (46%), Gaps = 66/501 (13%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+LI+ Y K G + A +F+ D V+ MV GY + G++ AR++FD MP K V
Sbjct: 92 NSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCV 151
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
++T M+ G+++ F + ++F MR G+ N +TL + AC VHGLV
Sbjct: 152 SYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLV 211
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ +I+ +++ Y + EA ++F M +R+ V+WN +++GY G ++EA
Sbjct: 212 VKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEAR 271
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
LF+ + KD +SW TMI G+ KG L +++E++
Sbjct: 272 ELFDGICDKDVISWGTMIDGYIQKGRLREALEIYR------------------------- 306
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
ML+ PN++ + +++SA + G Q+H VVK + IQ +++
Sbjct: 307 ------AMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIY 360
Query: 375 LYSKCG-----------NVVD--------------------AYRIFTNIDERNIVSYNSM 403
Y+ CG V D A + F + R++ S+++M
Sbjct: 361 FYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTM 420
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
ISG+AQ+ + AL LF KM G+ PN++T +SV SA +G ++EG + + M++ +
Sbjct: 421 ISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRS-ES 479
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE-PPPGVWGALLG--AGRTHLNLDLAK 520
I A ++D+ + GS+ A+ N + E W A++ A H ++ L
Sbjct: 480 IPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEV 539
Query: 521 LAAQHLMELEPDSATPYVVLS 541
+ ++P+ T VLS
Sbjct: 540 FSDMQRFHIKPNPITFIGVLS 560
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 152/334 (45%), Gaps = 73/334 (21%)
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
+ L ++C +G Q+H L+ + G ++ + NS+I MY + G + A +F
Sbjct: 54 LALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDG 113
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
+ D+VS N ++SGYV NG+I+ A +LF+ MP K VS+TTMI GF
Sbjct: 114 FATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGF------------- 160
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
V N + EA F +M V PN LTL +V+SA + +
Sbjct: 161 ------------------VQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVL 202
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+H VVKM + V + +L+ Y C V +A R+F + ERN+V++N M++G+A
Sbjct: 203 NCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYA 262
Query: 409 QNGLGE-------------------------------EALNLFRKMKDEGLVPNQITFLS 437
+ GL + EAL ++R M G PN++ ++
Sbjct: 263 KTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVN 322
Query: 438 VLSACN-----------HVGLVEEGFIYFKSMKT 460
++SAC H +V+ GF + ++T
Sbjct: 323 LVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQT 356
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 181/536 (33%), Positives = 310/536 (57%), Gaps = 46/536 (8%)
Query: 48 FVRRGMFYEAEELYVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAM----VEKDV 102
+ + G A +L+ MP R +V N +ISGY K G EEA+ +F M + ++V
Sbjct: 144 YAKYGPIEFARKLFDEMPDR---TVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNV 200
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RR 161
+ W +M+ G+ KKG + AR FDKMPE++VV+W AM+ GY + E+ LF M
Sbjct: 201 ITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSP 260
Query: 162 GGMAFNSITLTILFEACGRFFR--YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
G + + T + +C E + V L GF + + +++ M+ + G +
Sbjct: 261 GNVQPDETTWVTVISSCSSLGDPCLSESI-VRKLDDTVGFRPNYFVKTALLDMHAKCGNL 319
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG 279
+ A+K+F + Y+ +P W MI+ ++ G
Sbjct: 320 EAAHKIFEQLG----------------------VYKYRSSVP------WNAMISAYARVG 351
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVL 338
+L + LF+ MP++D V+W ++I+G+ N + +A + F EM+ +D +P+++T+ SV
Sbjct: 352 DLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVF 411
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA L G+ + + + +++ +S+ NSL+S+YS+CG++ DA IF + R++V
Sbjct: 412 SACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLV 471
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
SYN++ISGFA++G G E++ L KMK++G+ P++IT++++L+AC+H GL+ EG F+S+
Sbjct: 472 SYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESI 531
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
K P +HYACM+D+LGRAG L EA+ LI SM EP G++G+LL A H ++L
Sbjct: 532 KF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVEL 586
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+LAA L ++EP ++ YV+LS++Y+ G+ +DG++VR + + ++K+ G SW+
Sbjct: 587 GELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWL 642
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 200/419 (47%), Gaps = 57/419 (13%)
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDC-FEDGFDLFLSM-RRGGMAFNSITLTILFEACGR 180
IF +V +T M+ Y ++ + LF M R + N+ +++ ++ G
Sbjct: 57 HIFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGS 116
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
E + V + G+D D + N I+ +Y + G ++ A K+F M R WN +
Sbjct: 117 -----ESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVM 171
Query: 241 ISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
ISGY G EEA LF M ++ ++WTTMITG + KGNL+ + F+ MPE+
Sbjct: 172 ISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSV 231
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAA------------ 343
V+W A++SG+ EE R F +ML +V+P++ T +V+S+ ++
Sbjct: 232 VSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVR 291
Query: 344 ---------------TATLNQGSQIHAHVVKMNMESDVSIQ------------NSLVSLY 376
TA L+ +HA + + Q N+++S Y
Sbjct: 292 KLDDTVGFRPNYFVKTALLD----MHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAY 347
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITF 435
++ G++ A +F + +R+ VS+NSMI+G+ QNG +A+ LF +M E P+++T
Sbjct: 348 ARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTM 407
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+SV SAC H+G + G +K +I+ Y ++ + R GS+ +A+ + M
Sbjct: 408 VSVFSACGHLGELGLGNWAVSILKE-NHIQISISVYNSLISMYSRCGSMQDAVLIFQEM 465
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 213/537 (39%), Gaps = 135/537 (25%)
Query: 1 MADRTSASYNAMITAL--INNNCSIYEAFEIFATMPM-RNAVSYAAMITGFVRRGMFYEA 57
M DRT A +N MI+ N F + + RN +++ MITG ++G A
Sbjct: 160 MPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTA 219
Query: 58 EELYVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDG 111
+ MP R SV S NA++SGY + G EE R+F M V+ D W +++
Sbjct: 220 RMYFDKMPER---SVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISS 276
Query: 112 YCKKGRVIEAREIFDKMPE-----KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
G + I K+ + N TA++D + K E
Sbjct: 277 CSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHK------------ 324
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+FE G ++YR V N++I+ Y R+G + A +F
Sbjct: 325 -------IFEQLG-VYKYRSSVP----------------WNAMISAYARVGDLPSARHLF 360
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD--------FVS----------- 267
M +RD VSWNS+I+GY NGE +A +LFE M + VS
Sbjct: 361 DKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGEL 420
Query: 268 ---------------------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+ ++I+ +S G+++ ++ +F M +D V++ +ISGF
Sbjct: 421 GLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGF 480
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+ E+ ++M + P+++T ++L+A + L +G
Sbjct: 481 AEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQ--------------- 525
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
R+F +I ++ Y MI + G EEA+ L + M E
Sbjct: 526 --------------------RLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMPME 565
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAG 482
P+ + S+L+A + VE G + + L+ +EP +Y + +I AG
Sbjct: 566 ---PHAGIYGSLLNATSIHKQVELGEL---AAAKLFKVEPHNSGNYVLLSNIYASAG 616
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 319 FIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F MLR +++PN + SV+ SA + ++ AHV+K + D ++N ++ +Y+
Sbjct: 91 FKHMLRHCNIKPNT-SFYSVMMKSAGSESM----LFLAHVLKSGYDRDHYVRNGILGIYA 145
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
K G + A ++F + +R + +N MISG+ + G EEA LF M D+ + N IT+ +
Sbjct: 146 KYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTT 205
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM--- 494
+++ G ++ +YF M E + M+ + G+ E I L N M
Sbjct: 206 MITGHAKKGNLKTARMYFDKMP-----ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSP 260
Query: 495 -TFEPPPGVWGALLGA 509
+P W ++ +
Sbjct: 261 GNVQPDETTWVTVISS 276
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 202/655 (30%), Positives = 331/655 (50%), Gaps = 47/655 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + S N MI + + ++ A +F +M R+ V++ +I G+ + F EA L
Sbjct: 68 MPHKNVISTNTMIMGYLKSG-NLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNL 126
Query: 61 YVNMPARWR--DSVCSNALISGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCK 114
+ +M D + L+SG+ + E A++ +V + ++ S++D YCK
Sbjct: 127 FADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCK 186
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
+ A +F M EK+ V + A++ GY K D +LF M+ G + T +
Sbjct: 187 TRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAV 246
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
A + G QVH V + F +++ + N+++ Y + + EA K+F M + D
Sbjct: 247 LTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDG 306
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLE-------- 282
+S+N LI+ NG +EE+ LF + F + T+++ ++ NLE
Sbjct: 307 ISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQ 366
Query: 283 ---------------------------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
++ +F + + V WTA+ISG+V +E+
Sbjct: 367 AIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDG 426
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+ F+EM R + + T +S+L A A A+L G Q+H+ +++ S+V ++LV +
Sbjct: 427 LKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDM 486
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y+KCG++ +A ++F + RN VS+N++IS +AQNG G AL F +M GL PN ++F
Sbjct: 487 YAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSF 546
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
LS+L AC+H GLVEEG YF SM +Y +EP EHYA MVD+L R+G EA L+ M
Sbjct: 547 LSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMP 606
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEP-DSATPYVVLSDLYSVIGKKRDGN 554
FEP +W ++L + R H N +LA AA L ++ A PYV +S++Y+ G+
Sbjct: 607 FEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVG 666
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+V+ + + IRK P SW+ +K K H+F A S KEI L + K +E
Sbjct: 667 KVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEE 721
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 237/477 (49%), Gaps = 47/477 (9%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N + +L+ G A ++F+ M K+V++ +M+ GY K G + AR +FD M +++VV
Sbjct: 46 NFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVV 105
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
WT ++ GY + + F + F+LF M R GM + ITL L F E QVHG V
Sbjct: 106 TWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHV 165
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G+D +++ NS++ Y + + A +F M+++D V++N+L++GY G +A
Sbjct: 166 VKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAI 225
Query: 255 RLFERM------PGK-------------DFVSWTTMITGFSSKGN--------------- 280
LF +M P + D + + + F K N
Sbjct: 226 NLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFY 285
Query: 281 -----LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ ++ +LF MPE D +++ +I+ N + EE+ F E+ Q +
Sbjct: 286 SKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFA 345
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
++LS +A + L G QIH+ + + S+V + NSLV +Y+KC +A RIF ++ +
Sbjct: 346 TLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQ 405
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIY 454
+ V + ++ISG+ Q GL E+ L LF +M + + T+ S+L AC ++ + G ++
Sbjct: 406 SSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLH 465
Query: 455 FKSMKT--LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+ +++ L N+ G + +VD+ + GS+ EA+ + M W AL+ A
Sbjct: 466 SRIIRSGCLSNVFSG----SALVDMYAKCGSIKEALQMFQEMPVRNSVS-WNALISA 517
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 131/209 (62%)
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
+ +N + ++ G++ A +LF+ MP K+ +S TMI G+ GNL + LF+ M
Sbjct: 41 NTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMV 100
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
++ VTWT +I G+ + ++ EAF F +M R + P+ +TL+++LS ++N+ +Q
Sbjct: 101 QRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQ 160
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H HVVK+ +S + + NSL+ Y K ++ A +F ++ E++ V++N++++G+++ G
Sbjct: 161 VHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGF 220
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+A+NLF KM+D G P++ TF +VL+A
Sbjct: 221 NHDAINLFFKMQDLGFRPSEFTFAAVLTA 249
>gi|297796913|ref|XP_002866341.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312176|gb|EFH42600.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 284/475 (59%), Gaps = 8/475 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+V Y + G+V++AR++FD+MP++++ W M+ + +++ D+F M + G+ +
Sbjct: 57 LVSFYVECGKVLDARKVFDEMPKRDISGWVVMIGACARYGYYQESLDIFREMNKEGLKLD 116
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ L +A G +H LV + F+ D + +S+I MY + G + A KVF
Sbjct: 117 VFIVPSLLKASRNLLDREFGKMIHCLVLKCSFESDAFIVSSLIDMYSKFGEVVNARKVFD 176
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEK 283
+ ++D V +N++ISGY +N + +EA L + M D ++W +I+GFS GN EK
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDIITWNALISGFSHMGNEEK 236
Query: 284 SIELFNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
E+ +M D V+WT+IISG V+N Q E+AF F +ML + PN T++++L
Sbjct: 237 VSEILELMCLDGYMPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATITTLLP 296
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A A + G +IH + V +E ++++L+ +Y KCG + +A +F ++ V+
Sbjct: 297 ACTTLANMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVT 356
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+NSMI +A +GL ++A+ LF +M+ G + +TF ++L+AC+H GL + G F M+
Sbjct: 357 FNSMIFCYANHGLSDKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFHLMQ 416
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
T Y IEP EHYACMVD+LGRAG L EA +++ +M EP VWGALLGA R H N++LA
Sbjct: 417 TKYRIEPRLEHYACMVDLLGRAGKLVEAYEMMKTMRMEPDLFVWGALLGACRNHGNMELA 476
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
++AA+ L ELEP+++ ++L+ LY+ +G + R++ K KR R+ G SW+
Sbjct: 477 RIAAKRLAELEPENSGNGLLLTSLYADVGSWENVIRMKKMIKKKRFRRFLGSSWV 531
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 175/427 (40%), Gaps = 99/427 (23%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------------PARWRD 70
+ +A ++F MP R+ + MI R G + E+ +++ M P+ +
Sbjct: 67 VLDARKVFDEMPKRDISGWVVMIGACARYGYYQESLDIFREMNKEGLKLDVFIVPSLLKA 126
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
S N L + K+ C + + E D S++D Y K G V+ AR++FD + E
Sbjct: 127 S--RNLLDREFGKMIHC----LVLKCSFESDAFIVSSLIDMYSKFGEVVNARKVFDDLGE 180
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
+++V + AM+ GY ++ +L M+
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMK------------------------------ 210
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS----KRDAVSWNSLISGYVH 246
G DII N++I+ + +G ++ +++ +M D VSW S+ISG VH
Sbjct: 211 -----LLGIKPDIITWNALISGFSHMGNEEKVSEILELMCLDGYMPDVVSWTSIISGLVH 265
Query: 247 NGEIEEAYRLFERM--------------------------PGKDFVSWTTMITG------ 274
N + E+A+ F++M GK+ + +++TG
Sbjct: 266 NFQNEKAFDAFKQMLTHGLYPNSATITTLLPACTTLANMKHGKEIHGY-SVVTGLEDHGF 324
Query: 275 --------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+ G + +++ LF P+K VT+ ++I + N+ ++A F +M
Sbjct: 325 VRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLSDKAVELFDQMEATG 384
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQI-HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ + LT +++L+A + + G + H K +E + +V L + G +V+A
Sbjct: 385 EKLDHLTFTAILTACSHAGLTDLGQNLFHLMQTKYRIEPRLEHYACMVDLLGRAGKLVEA 444
Query: 386 YRIFTNI 392
Y + +
Sbjct: 445 YEMMKTM 451
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 148/360 (41%), Gaps = 79/360 (21%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L EA R G+ +H + G + +++ Y G + +A KVF M KRD
Sbjct: 22 LIEANSRDRLLCGGIVLHAHLVTSGIARLTRIAAKLVSFYVECGKVLDARKVFDEMPKRD 81
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMP--------------------------GK---- 263
W +I G +E+ +F M GK
Sbjct: 82 ISGWVVMIGACARYGYYQESLDIFREMNKEGLKLDVFIVPSLLKASRNLLDREFGKMIHC 141
Query: 264 ---------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
D +++I +S G + + ++F+ + E+D V + A+ISG+ NN Q +E
Sbjct: 142 LVLKCSFESDAFIVSSLIDMYSKFGEVVNARKVFDDLGEQDLVVFNAMISGYANNSQADE 201
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A +M ++P+ +T ++++S + M E VS L+
Sbjct: 202 ALNLVKDMKLLGIKPDIITWNALISGFS----------------HMGNEEKVSEILELMC 245
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
L D Y ++VS+ S+ISG N E+A + F++M GL PN T
Sbjct: 246 L--------DGYM-------PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY----ACMVDILGRAGSLAEAIDL 490
++L AC + ++ G K + Y++ G E + + ++D+ G+ G ++EA+ L
Sbjct: 291 ITTLLPACTTLANMKHG----KEIHG-YSVVTGLEDHGFVRSALLDMYGKCGFISEAMIL 345
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/656 (29%), Positives = 327/656 (49%), Gaps = 75/656 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
++ A +F MP +N S +++ + G A+ L+++ P R++ ++ +
Sbjct: 59 LHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSP--HRNATTWTIMMRAHA 116
Query: 83 KVGRCEEAARIFEAMVEKDVV----------------------------------AWGSM 108
GR +A +F AM+ + V+ ++
Sbjct: 117 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTL 176
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
+D YCK G + AR +F +M +K+ V + AM+ G K LF +MRR G+
Sbjct: 177 LDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATH 236
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
T + + G QVH LV R ++ + NS++ Y + +D+ ++F
Sbjct: 237 FTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDE 296
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMIT----------- 273
M +RD VS+N +I+ Y N RLF M F + + TM++
Sbjct: 297 MPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIG 356
Query: 274 ----------GFSSK--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
G +S+ G L+ + F+ EK ++WTA+I+G+V N
Sbjct: 357 KQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN 416
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
Q+EEA + F +M R +RP++ T SS++ AS++ A + G Q+H+++++ +S V
Sbjct: 417 GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG 476
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+ LV +Y+KCG + +A R F + ERN +S+N++IS +A G + A+ +F M G
Sbjct: 477 SVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFN 536
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
P+ +TFLSVL+AC+H GL +E YF MK Y+I P EHYAC++D LGR G ++
Sbjct: 537 PDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQK 596
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
++ M F+ P +W ++L + R H N +LA++AA L +EP ATPYV+LS++Y+ G+
Sbjct: 597 MLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQ 656
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
D V+ + + +RK G SW+ +K K++ F + + + EI+ L + K
Sbjct: 657 WEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYK 712
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 218/471 (46%), Gaps = 54/471 (11%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L G A +F+ M K++ + ++ Y G + A+ +F P +N WT M+
Sbjct: 54 LSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMR 113
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
+ D LF +M G+ + +T+T + G +H +FG D
Sbjct: 114 AHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDT 168
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM- 260
+ + N+++ Y + G + A +VF M +DAV++N+++ G G +A +LF M
Sbjct: 169 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228
Query: 261 ----PGKDFV--SWTTMITG-------------------------------FSSKGN-LE 282
P F S T+ G F SK + L+
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
LF+ MPE+D+V++ II+ + N+ R F EM + L +++LS +
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAG 348
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ ++ G QIHA +V + + S+ + N+L+ +YSKCG + A F+N E++ +S+ +
Sbjct: 349 SLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTA 408
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
+I+G+ QNG EEAL LF M+ GL P++ TF S++ A + + ++ G + + + Y
Sbjct: 409 LITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLG----RQLHS-Y 463
Query: 463 NIEPGPEHY----ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
I G + + +VD+ + G L EA+ + M E W A++ A
Sbjct: 464 LIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 115/215 (53%), Gaps = 9/215 (4%)
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSI 285
F +++ R + SL+S +G + A +F++MP K+ S +++ +SS G+L +
Sbjct: 39 FDVLTYRLNLGLRSLLS----SGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQ 94
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
LF P ++ TWT ++ + +A F ML + V P+++T+++VL+ T
Sbjct: 95 HLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV 154
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+H +K +++ V + N+L+ Y K G + A R+F + +++ V+YN+M+
Sbjct: 155 -----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMM 209
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
G ++ GL +AL LF M+ G+ TF S+L+
Sbjct: 210 GCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 196/469 (41%), Gaps = 81/469 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPM----RNAVSYAAMIT-----GFVRR 51
M +R + SYN +I A N C+ +F M R + YA M++ V
Sbjct: 297 MPERDNVSYNVIIAAYAWNQCAA-TVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHI 355
Query: 52 GMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
G A+ + + + + + + NALI Y K G + A F EK ++W +++ G
Sbjct: 356 GKQIHAQLVLLGLAS---EDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 412
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y + G+ E+ LF MRR G+ + T
Sbjct: 413 YVQNGQ-------------------------------HEEALQLFSDMRRAGLRPDRATF 441
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ + +A G Q+H + R G+ + G+ ++ MY + G +DEA + F M +
Sbjct: 442 SSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPE 501
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL 287
R+++SWN++IS Y H GE + A ++FE M D V++ +++ S G ++ ++
Sbjct: 502 RNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKY 561
Query: 288 FNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
F++M + ++ + +I + + + +EM + + + +S+L +
Sbjct: 562 FHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEM---PFKADPIIWTSILHSCR 618
Query: 343 ATATLNQGSQIHAHVVK---MNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI- 397
G+Q A V ME +D + L ++Y++ G DA + + +R +
Sbjct: 619 I-----HGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVR 673
Query: 398 -------VSYNSMISGFAQNGLG--------EEALNLFRKMKDEGLVPN 431
V I FA N L +E L+++M +G P+
Sbjct: 674 KESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 722
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/656 (29%), Positives = 327/656 (49%), Gaps = 75/656 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
++ A +F MP +N S +++ + G A+ L+++ P R++ ++ +
Sbjct: 59 LHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSP--HRNATTWTIMMRAHA 116
Query: 83 KVGRCEEAARIFEAMVEKDVV----------------------------------AWGSM 108
GR +A +F AM+ + V+ ++
Sbjct: 117 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTL 176
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
+D YCK G + AR +F +M +K+ V + AM+ G K LF +MRR G+
Sbjct: 177 LDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATH 236
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
T + + G QVH LV R ++ + NS++ Y + +D+ ++F
Sbjct: 237 FTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDE 296
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMIT----------- 273
M +RD VS+N +I+ Y N RLF M F + + TM++
Sbjct: 297 MPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIG 356
Query: 274 ----------GFSSK--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
G +S+ G L+ + F+ EK ++WTA+I+G+V N
Sbjct: 357 KQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN 416
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
Q+EEA + F +M R +RP++ T SS++ AS++ A + G Q+H+++++ +S V
Sbjct: 417 GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG 476
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+ LV +Y+KCG + +A R F + ERN +S+N++IS +A G + A+ +F M G
Sbjct: 477 SVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFN 536
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
P+ +TFLSVL+AC+H GL +E YF MK Y+I P EHYAC++D LGR G ++
Sbjct: 537 PDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQK 596
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
++ M F+ P +W ++L + R H N +LA++AA L +EP ATPYV+LS++Y+ G+
Sbjct: 597 MLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQ 656
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
D V+ + + +RK G SW+ +K K++ F + + + EI+ L + K
Sbjct: 657 WEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYK 712
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 218/471 (46%), Gaps = 54/471 (11%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L G A +F+ M K++ + ++ Y G + A+ +F P +N WT M+
Sbjct: 54 LSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMR 113
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
+ D LF +M G+ + +T+T + G +H +FG D
Sbjct: 114 AHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP-----SLHPFAIKFGLDT 168
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM- 260
+ + N+++ Y + G + A +VF M +DAV++N+++ G G +A +LF M
Sbjct: 169 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228
Query: 261 ----PGKDFV--SWTTMITG-------------------------------FSSKGN-LE 282
P F S T+ G F SK + L+
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
LF+ MPE+D+V++ II+ + N+ R F EM + L +++LS +
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAG 348
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ ++ G QIHA +V + + S+ + N+L+ +YSKCG + A F+N E++ +S+ +
Sbjct: 349 SLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTA 408
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
+I+G+ QNG EEAL LF M+ GL P++ TF S++ A + + ++ G + + + Y
Sbjct: 409 LITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLG----RQLHS-Y 463
Query: 463 NIEPGPEHY----ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
I G + + +VD+ + G L EA+ + M E W A++ A
Sbjct: 464 LIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 115/215 (53%), Gaps = 9/215 (4%)
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSI 285
F +++ R + SL+S +G + A +F++MP K+ S +++ +SS G+L +
Sbjct: 39 FDVLTYRLNLGLRSLLS----SGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQ 94
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
LF P ++ TWT ++ + +A F ML + V P+++T+++VL+ T
Sbjct: 95 HLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV 154
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+H +K +++ V + N+L+ Y K G + A R+F + +++ V+YN+M+
Sbjct: 155 -----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMM 209
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
G ++ GL +AL LF M+ G+ TF S+L+
Sbjct: 210 GCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 196/469 (41%), Gaps = 81/469 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPM----RNAVSYAAMIT-----GFVRR 51
M +R + SYN +I A N C+ +F M R + YA M++ V
Sbjct: 297 MPERDNVSYNVIIAAYAWNQCAA-TVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHI 355
Query: 52 GMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
G A+ + + + + + + NALI Y K G + A F EK ++W +++ G
Sbjct: 356 GKQIHAQLVLLGLAS---EDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 412
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y + G+ E+ LF MRR G+ + T
Sbjct: 413 YVQNGQ-------------------------------HEEALQLFSDMRRAGLRPDRATF 441
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ + +A G Q+H + R G+ + G+ ++ MY + G +DEA + F M +
Sbjct: 442 SSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPE 501
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL 287
R+++SWN++IS Y H GE + A ++FE M D V++ +++ S G ++ ++
Sbjct: 502 RNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKY 561
Query: 288 FNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
F++M + ++ + +I + + + +EM + + + +S+L +
Sbjct: 562 FHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEM---PFKADPIIWTSILHSCR 618
Query: 343 ATATLNQGSQIHAHVVK---MNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI- 397
G+Q A V ME +D + L ++Y++ G DA + + +R +
Sbjct: 619 I-----HGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVR 673
Query: 398 -------VSYNSMISGFAQNGLGEEALN--------LFRKMKDEGLVPN 431
V I FA N L ++ L+++M +G P+
Sbjct: 674 KESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 722
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 167/460 (36%), Positives = 267/460 (58%), Gaps = 1/460 (0%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + A ++F + E + W M+ G + + L+ M G + + T +
Sbjct: 61 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 120
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+AC R + G VHG V R GF+ + + N++I + G + A +F +KRD V
Sbjct: 121 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 180
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
+W++L +GY GE+ A +LF+ MP KD VSW MITG++ +G +E + +LF+ +P++D
Sbjct: 181 AWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRD 240
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
VTW A+I+G+V ++A F EM P+++T+ S+LSA L+ G +IH
Sbjct: 241 VVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHC 300
Query: 356 HVVKMNMES-DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+ +M V + N+L+ +Y+KCG++V A +F + E+++ ++NS++ G A +G E
Sbjct: 301 CISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAE 360
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
++++LF +M+ + P++ITF+ VL AC+H G VEEG YF M+ YNIEP HY CM
Sbjct: 361 KSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCM 420
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
VD+LGRAG L EA D I++M EP VW LLGA R H N++L + A L+++ D +
Sbjct: 421 VDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDES 480
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
YV+LS++Y+ G+ +VR +RK GCS I
Sbjct: 481 GDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLI 520
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 158/302 (52%), Gaps = 13/302 (4%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
RD V +AL +GY + G A ++F+ M KD+V+W M+ GY K+G + AR++FD++
Sbjct: 177 RDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEV 236
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P+++VV W AM+ GY+ + ++F MR G + +T+ L AC G
Sbjct: 237 PKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQ 296
Query: 189 QVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++H +S GF D ++LGN++I MY + G + A +VF M ++D +WNS++ G +
Sbjct: 297 RIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFH 356
Query: 248 GEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT----- 298
G E++ LF M D +++ ++ S G +E+ + F++M ++ ++
Sbjct: 357 GHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRH 416
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
+ ++ EAF FI+ ++ + PN + ++L A + G + + ++
Sbjct: 417 YGCMVDLLGRAGLLNEAFD-FIDTMK--IEPNAIVWRTLLGACRIHGNVELGRRANMQLL 473
Query: 359 KM 360
KM
Sbjct: 474 KM 475
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 44/272 (16%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP+++ VS+ MITG+ +RG A +L+ +P RD V NA+I+GY+ G
Sbjct: 198 ARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPK--RDVVTWNAMIAGYVLCG 255
Query: 86 RCEEAARIFEAM----------------------------------------VEKDVVAW 105
++A +FE M + V+
Sbjct: 256 SNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLG 315
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+++D Y K G ++ A E+F M EK+V W +++ G E LF MR+ +
Sbjct: 316 NALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIR 375
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLV-SRFGFDYDIILGNSIITMYGRLGFMDEA-N 223
+ IT + AC R EG Q L+ + + +I ++ + GR G ++EA +
Sbjct: 376 PDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFD 435
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ +M + +A+ W +L+ +G +E R
Sbjct: 436 FIDTMKIEPNAIVWRTLLGACRIHGNVELGRR 467
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 134/366 (36%), Gaps = 112/366 (30%)
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+G + A++LF + D W TMI G + + +I L++ M
Sbjct: 60 SGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMEN------------- 106
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
VRP++ T VL A + G +H V ++ ES+
Sbjct: 107 ------------------GCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNT 148
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNI----------------------------- 397
++N+L+ ++ CG++ A +F +R++
Sbjct: 149 FVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVK 208
Query: 398 --VSYNSMISGFAQNGLGEEALNLF-------------------------------RKMK 424
VS+N MI+G+A+ G E A LF +M+
Sbjct: 209 DLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR 268
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGF--------IYFKSMKTLYNIEPGPEHYACMVD 476
G +P+++T LS+LSAC +G ++ G + F+ + L ++D
Sbjct: 269 SVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLG--------NALID 320
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLG--AGRTHLNLDLAKLAAQHLMELEPDSA 534
+ + GS+ A+++ M E W ++LG A H + +++ PD
Sbjct: 321 MYAKCGSIVRALEVFQGMR-EKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEI 379
Query: 535 TPYVVL 540
T VL
Sbjct: 380 TFVGVL 385
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 287/503 (57%), Gaps = 40/503 (7%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G + AR++FD+MPE+ VV+W+A + GY + C++D +FL M R G N T
Sbjct: 42 YSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTY 101
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ AC + G+Q+ G + + F ++I+ ++++ ++ + G M++A+ +F MM +
Sbjct: 102 GSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEE 161
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM------P------------------------ 261
RD VSWN++I Y G +++R+F M P
Sbjct: 162 RDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQI 221
Query: 262 ---------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
G ++I ++ +L + L+ MP KD ++ TA+++G+ + Y
Sbjct: 222 HQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNY 281
Query: 313 E-EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
+A F E+ + ++ + + L S+ + A ++L+ G QIHA +K DV++ N+
Sbjct: 282 SSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNA 341
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
L+ +Y+K G + DA R F ++E+N++S+ S+I+G+ +G G EA+ LF+KM+ EGL PN
Sbjct: 342 LIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPN 401
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
ITFLS+L ACNH GL EG+ F +M + YNI P EH++CMVD+ R G L EA +LI
Sbjct: 402 DITFLSLLFACNHCGLTGEGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLI 461
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
N M +P +WGA+LGA + N+ LA+ AA HL +++P+++ YVVL+D+Y+ G
Sbjct: 462 NKMNIKPNASLWGAILGACYIYGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWD 521
Query: 552 DGNRVRMKKKLKRIRKSPGCSWI 574
+ ++R + + ++K+PG S+I
Sbjct: 522 NAWKMRKLMEERNLKKAPGYSFI 544
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 220/516 (42%), Gaps = 105/516 (20%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP R VS++A I+G+ + G + +A ++++M R +N G +
Sbjct: 51 ARKVFDRMPERTVVSWSAQISGYSQNGCYQDALLVFLDM---LRAGFKANQFTYGSVLRA 107
Query: 86 ----RCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
RC + + +EK +++ +++D + K G++ +A +F M E++VV+W
Sbjct: 108 CTGLRCLQRGMQIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSW 167
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
A++ Y D F +F SM + GM+ + T + +A G Q+H L+ +
Sbjct: 168 NAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQ 227
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI-EEAYR 255
G+ I L S+I Y + + A+ ++ M +D +S +L++GY + +A
Sbjct: 228 LGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALD 287
Query: 256 LFERM---------------------------------------PGKDFVSWTTMITGFS 276
LF+ + P D +I ++
Sbjct: 288 LFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYA 347
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G ++ + FN M EK+ ++WT++I+G+ ++ EA F +M + ++PN +T S
Sbjct: 348 KSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLS 407
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN-IDER 395
+L A + CG + + F N I +
Sbjct: 408 LLFAC-----------------------------------NHCGLTGEGWECFNNMISKY 432
Query: 396 NIV----SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG---LV 448
NI+ ++ M+ FA+ GL EEA NL KM + PN + ++L AC G L
Sbjct: 433 NILPRAEHFSCMVDLFARGGLLEEAYNLINKMN---IKPNASLWGAILGACYIYGNMPLA 489
Query: 449 EEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAGS 483
EE I+ L+ ++P +Y + DI AGS
Sbjct: 490 EEAAIH------LFKMDPENSVNYVVLADIYAAAGS 519
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 174/372 (46%), Gaps = 48/372 (12%)
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
+ G +H + GF +I L +I Y +LG A KVF M +R VSW++ ISGY
Sbjct: 14 KPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGY 73
Query: 245 VHNGEIEEAYRLFERMP---------------------------------------GKDF 265
NG ++A +F M +
Sbjct: 74 SQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNL 133
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ + ++ S G +E + LF MM E+D V+W AII + ++FR F M+++
Sbjct: 134 IVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQE 193
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ P+ T SVL AS + + + QIH ++++ S +S+ SL+ Y+KC ++ A
Sbjct: 194 GMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASA 253
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNG-LGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
+ ++ ++ ++++S ++++G+A++ +AL+LF++++ + + + S+ + C +
Sbjct: 254 HCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICAN 313
Query: 445 VGLVEEGF-IYFKSMKT--LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
+ + G I+ ++K Y++ G ++D+ ++G + +A N M E
Sbjct: 314 ISSLSVGRQIHALALKCKPTYDVAMGNA----LIDMYAKSGEIKDANRAFNEME-EKNVI 368
Query: 502 VWGALLGAGRTH 513
W +L+ +H
Sbjct: 369 SWTSLITGYGSH 380
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%)
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
T G IH ++ S++ + L+ YSK G+ V A ++F + ER +VS+++
Sbjct: 10 TKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQ 69
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
ISG++QNG ++AL +F M G NQ T+ SVL AC + ++ G
Sbjct: 70 ISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRG 117
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 131/318 (41%), Gaps = 76/318 (23%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRG--------MFYEAEELYV----------- 62
S+ A ++ +MPM++ +S A++TG+ R +F E +++++
Sbjct: 249 SLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMF 308
Query: 63 NMPARWR-------------------DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV 103
N+ A D NALI Y K G ++A R F M EK+V+
Sbjct: 309 NICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVI 368
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
+W S++ GY G EA +F KM + G
Sbjct: 369 SWTSLITGYGSHGHGHEAIALFKKMEYE-------------------------------G 397
Query: 164 MAFNSITLTILFEACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
+ N IT L AC EG + + ++S++ + ++ ++ R G ++EA
Sbjct: 398 LKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEA 457
Query: 223 -NKVFSMMSKRDAVSWNSLISGYVHNGEI----EEAYRLFERMPGKDFVSWTTMITGFSS 277
N + M K +A W +++ G + E A LF+ P ++ V++ + +++
Sbjct: 458 YNLINKMNIKPNASLWGAILGACYIYGNMPLAEEAAIHLFKMDP-ENSVNYVVLADIYAA 516
Query: 278 KGNLEKSIELFNMMPEKD 295
G+ + + ++ +M E++
Sbjct: 517 AGSWDNAWKMRKLMEERN 534
>gi|296085749|emb|CBI29560.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 198/581 (34%), Positives = 309/581 (53%), Gaps = 79/581 (13%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN I Y K GR A + F+ + + +V ++ +++ Y K+ R + A ++FD++PE ++
Sbjct: 46 SNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDL 105
Query: 134 VAWTAMVDGYMKVDCFEDG--FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV--Q 189
V++ ++ Y DC E LF MR G+ + TL+ + AC G+ Q
Sbjct: 106 VSYNTLISAY--ADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCD----DVGLIGQ 159
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNG 248
+H + GFD + + N+++T YG+ G +D+A +VF M RD VSWNS+I Y +
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQ 219
Query: 249 EIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIE------------------ 286
E +A LF+ M + D + +++T F+ +L ++
Sbjct: 220 EGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGS 279
Query: 287 ------------------LFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEMLRKDV 327
+F + E D V W ++SG+ NE++ E+A F +M
Sbjct: 280 GLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGY 339
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
RPN + V+SA + ++ +QG QIH+ +K R
Sbjct: 340 RPNDCSFVCVISACSNLSSPSQGKQIHSLALK---------------------------R 372
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + E N VS NSMI+G+AQ+G+ E+L+LF+ M + + P ITF+SVLSAC H G
Sbjct: 373 LFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGR 432
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
VEEG+ YF MK +NIEP EHY+CM+D+LGRAG L+EA +LI M F P W +LL
Sbjct: 433 VEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLL 492
Query: 508 GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRK 567
GA RTH N++LA AA +++LEP +A PYVVLS++Y+ G+ + VR + + ++K
Sbjct: 493 GACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKK 552
Query: 568 SPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
PGCSWI +K ++H+F+A S +KEI L+ +S K
Sbjct: 553 KPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMK 593
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 158/349 (45%), Gaps = 72/349 (20%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H L + N I +Y + G + A K F +S + S+N++I+ Y
Sbjct: 27 GKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAK 86
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVTWTAI 302
A++LF+++P D VS+ T+I+ ++ G ++ LF+ M E D T +A+
Sbjct: 87 ESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAV 146
Query: 303 I-------------------SGF-----VNNE---------QYEEAFRWFIEM--LRKDV 327
I SGF VNN ++A R F M +R +V
Sbjct: 147 ITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEV 206
Query: 328 RPNQL------------------------------TLSSVLSASAATATLNQGSQIHAHV 357
N + TL+SVL+A L+ G Q H +
Sbjct: 207 SWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQL 266
Query: 358 VKMNMESDVSIQNSLVSLYSKC-GNVVDAYRIFTNIDERNIVSYNSMISGFAQN-GLGEE 415
+K + + + L+ LYSKC G + D ++F I E ++V +N+M+SG++QN E+
Sbjct: 267 IKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYN 463
AL FR+M+ G PN +F+ V+SAC+++ +G I+ ++K L++
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKRLFD 375
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 32/144 (22%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV-------------- 382
+L A L+ G +H+ +K + N + LYSKCG +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 383 -----------------VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ A+++F I E ++VSYN++IS +A G AL LF M++
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 426 EGLVPNQITFLSVLSA-CNHVGLV 448
GL + T +V++A C+ VGL+
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLI 157
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 171/482 (35%), Positives = 274/482 (56%), Gaps = 11/482 (2%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + A ++F + E + W M+ G + + L+ M G + + T +
Sbjct: 26 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 85
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+AC R + G VHG V R GF+ + + N++I + G + A +F +KRD V
Sbjct: 86 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 145
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
+W++L +GY GE+ A +LF+ MP KD VSW MITG++ +G +E + +LF+ +P++D
Sbjct: 146 AWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRD 205
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
VTW A+I+G+V ++A F EM P+++T+ S+LSA L+ G +IH
Sbjct: 206 VVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHC 265
Query: 356 HVVKMNMES-DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+ +M V + N+L+ +Y+KCG++V A +F + E+++ ++NS++ G A +G E
Sbjct: 266 CISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAE 325
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
++++LF +M+ + P++ITF+ VL AC+H G VEEG YF M+ YNIEP HY CM
Sbjct: 326 KSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCM 385
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
VD+LGRAG L EA D I++M EP VW LLGA R H N++L + A L+++ D +
Sbjct: 386 VDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDES 445
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI----------ILKDKVHLFL 584
YV+LS++Y+ G+ +VR +RK GCS I + K +LF+
Sbjct: 446 GDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALMHFLFDSKPNLFI 505
Query: 585 AG 586
G
Sbjct: 506 EG 507
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 158/302 (52%), Gaps = 13/302 (4%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
RD V +AL +GY + G A ++F+ M KD+V+W M+ GY K+G + AR++FD++
Sbjct: 142 RDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEV 201
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P+++VV W AM+ GY+ + ++F MR G + +T+ L AC G
Sbjct: 202 PKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQ 261
Query: 189 QVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++H +S GF D ++LGN++I MY + G + A +VF M ++D +WNS++ G +
Sbjct: 262 RIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFH 321
Query: 248 GEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT----- 298
G E++ LF M D +++ ++ S G +E+ + F++M ++ ++
Sbjct: 322 GHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRH 381
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
+ ++ EAF FI+ ++ + PN + ++L A + G + + ++
Sbjct: 382 YGCMVDLLGRAGLLNEAFD-FIDTMK--IEPNAIVWRTLLGACRIHGNVELGRRANMQLL 438
Query: 359 KM 360
KM
Sbjct: 439 KM 440
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 44/272 (16%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP+++ VS+ MITG+ +RG A +L+ +P RD V NA+I+GY+ G
Sbjct: 163 ARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPK--RDVVTWNAMIAGYVLCG 220
Query: 86 RCEEAARIFEAM----------------------------------------VEKDVVAW 105
++A +FE M + V+
Sbjct: 221 SNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLG 280
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+++D Y K G ++ A E+F M EK+V W +++ G E LF MR+ +
Sbjct: 281 NALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIR 340
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLV-SRFGFDYDIILGNSIITMYGRLGFMDEA-N 223
+ IT + AC R EG Q L+ + + +I ++ + GR G ++EA +
Sbjct: 341 PDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFD 400
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ +M + +A+ W +L+ +G +E R
Sbjct: 401 FIDTMKIEPNAIVWRTLLGACRIHGNVELGRR 432
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 134/366 (36%), Gaps = 112/366 (30%)
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+G + A++LF + D W TMI G + + +I L++ M
Sbjct: 25 SGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMEN------------- 71
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
VRP++ T VL A + G +H V ++ ES+
Sbjct: 72 ------------------GCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNT 113
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNI----------------------------- 397
++N+L+ ++ CG++ A +F +R++
Sbjct: 114 FVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVK 173
Query: 398 --VSYNSMISGFAQNGLGEEALNLF-------------------------------RKMK 424
VS+N MI+G+A+ G E A LF +M+
Sbjct: 174 DLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR 233
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGF--------IYFKSMKTLYNIEPGPEHYACMVD 476
G +P+++T LS+LSAC +G ++ G + F+ + L ++D
Sbjct: 234 SVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLG--------NALID 285
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLG--AGRTHLNLDLAKLAAQHLMELEPDSA 534
+ + GS+ A+++ M E W ++LG A H + +++ PD
Sbjct: 286 MYAKCGSIVRALEVFQGMR-EKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEI 344
Query: 535 TPYVVL 540
T VL
Sbjct: 345 TFVGVL 350
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 204/637 (32%), Positives = 329/637 (51%), Gaps = 95/637 (14%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+N+MI + N + EA +F +N ++ ++TG+ + G EA E+
Sbjct: 65 MIQRDVVSWNSMINGY-SQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREV 123
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ +M R + V NA+ISGY++ G + A ++F+ M EK+V +W S+V GYC R+ E
Sbjct: 124 FESMTER--NVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSE 181
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
ARE+FD+MPE+N V+W M+ GY+ + + + +D+F+ M R ++ T+ F CGR
Sbjct: 182 ARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTRNEYSWTTMIAAFAQCGR 241
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ I +Y R+ + ++ SW ++
Sbjct: 242 L-------------------------DDAIQLYERVP------------EQTNSASWAAM 264
Query: 241 ISGYVHNGEIEEAYRLFERM-------------------------------------PGK 263
I+G+V N E EA L + G
Sbjct: 265 IAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGC 324
Query: 264 DFVSWTT--MITGFSSKGNLEKSIELFNM--MPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
F S+ +I+ ++ GN+E +F MP++D V+WTAIIS +V E A F
Sbjct: 325 QFNSYVMNGLISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLF 384
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
++ML + ++PNQLT++S+LSA + G Q HA + K+ ++ + + NSL+++Y KC
Sbjct: 385 LDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKC 444
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G D + +F + E +++++N+++ G AQNGLG+EA+ +F +M+ EG++P+Q++FL VL
Sbjct: 445 G-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVL 503
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
AC+H GLV+EG+ +F SM Y I P HY CMVD+LGRAG L+EA LI +M +P
Sbjct: 504 CACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPD 563
Query: 500 PGVWGALLGAGRTHLNLDL----AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNR 555
+W ALLGA R H N +L KLA + P+ +P ++ +L + G +
Sbjct: 564 SVIWEALLGACRIHRNNELLYHSEKLAVVFGILSTPN-GSPIQIIKNL-RICGDCHTFMK 621
Query: 556 VRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLD 592
K L++I G ++ H F G SC D
Sbjct: 622 FMSKVTLRKIIIRDG-------NRFHHFRDGSCSCGD 651
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 223/388 (57%), Gaps = 26/388 (6%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N I ++GR EEA R+F M+++DVV+W SM++GY + G+V EAR +FD KN+
Sbjct: 43 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 102
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
WT ++ GY K E+ ++F SM R +++N++ G +G
Sbjct: 103 TWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMI---------------SGYVQNGD 147
Query: 194 V--SRFGFD----YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+ +R FD ++ NS++T Y M EA ++F M +R++VSW +ISGYVH
Sbjct: 148 LKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHI 207
Query: 248 GEIEEAYRLFERMP-GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK-DDVTWTAIISG 305
+ EA+ +F +M ++ SWTTMI F+ G L+ +I+L+ +PE+ + +W A+I+G
Sbjct: 208 SDYWEAWDVFVKMCRTRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAG 267
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
FV NE+ EA IE+ R P+ + +S LSA A + G IH+ +K + +
Sbjct: 268 FVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFN 327
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNI--DERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ N L+S+Y+KCGNV D +F I +R++VS+ ++IS + Q G GE AL+LF M
Sbjct: 328 SYVMNGLISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDM 387
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEG 451
G+ PNQ+T S+LSAC ++G ++ G
Sbjct: 388 LARGIKPNQLTVTSLLSACGNLGAIKLG 415
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 160/284 (56%), Gaps = 34/284 (11%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
N+ I GRLG ++EA +VF+ M +RD VSWNS+I+GY NG+++EA LF+ GK+
Sbjct: 43 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 102
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+WT ++TG++ +G +E++ E+F M E++ V+W A+ISG+V N + A + F EM K+
Sbjct: 103 TWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKN 162
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQI------------------HAHV----------V 358
V + +SV++ +++ ++ + H+ V
Sbjct: 163 V----ASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFV 218
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER-NIVSYNSMISGFAQNGLGEEAL 417
KM + ++++ +++CG + DA +++ + E+ N S+ +MI+GF QN EAL
Sbjct: 219 KMCRTRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESREAL 278
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKT 460
L ++ G VP+ +F S LSAC ++G VE G I+ ++KT
Sbjct: 279 ELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKT 322
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 130/279 (46%), Gaps = 19/279 (6%)
Query: 258 ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
+ P T I G +E++ +FN M ++D V+W ++I+G+ N + +EA
Sbjct: 32 QETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARL 91
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F + K++R T + +L+ A + + ++ + + N+ S N+++S Y
Sbjct: 92 LFDAFVGKNIR----TWTILLTGYAKEGRIEEAREVFESMTERNVVS----WNAMISGYV 143
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
+ G++ +A ++F + E+N+ S+NS+++G+ EA LF +M + N ++++
Sbjct: 144 QNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPER----NSVSWMV 199
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
++S H+ E + F M N + M+ + G L +AI L + +
Sbjct: 200 MISGYVHISDYWEAWDVFVKMCRTRN----EYSWTTMIAAFAQCGRLDDAIQLYERVPEQ 255
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
W A++ + + ++ A + L+EL + P
Sbjct: 256 TNSASWAAMIAG---FVQNEESREALELLIELHRSGSVP 291
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 300/540 (55%), Gaps = 45/540 (8%)
Query: 90 AARIFEAMVEKDVVAWGSMVDGYCK---KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV 146
A F + K + ++ GY K GR+ +AR +FD +P + V++ ++ +
Sbjct: 26 AEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFAC 85
Query: 147 DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
+ + +F +M D+
Sbjct: 86 GDIDGAWRVFSTMPV---------------------------------------RDVTSW 106
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-DF 265
N++++ + G ++EA +F M R+AVSWN++++ +G++ A LF P K D
Sbjct: 107 NTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAPEKTDA 166
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ WT M++G+ GN++K++E F MP ++ V+W A+++G+V N + +A R F M+
Sbjct: 167 ILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVED 226
Query: 326 D-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
V+PN TLSSVL + + L G Q+H +K+ + +++ SL+S+Y KCG++ D
Sbjct: 227 AIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDD 286
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A ++F + ++IV++N+MISG+AQ+G G +A+ LF KMKDEG+VP+ IT L+VL+AC H
Sbjct: 287 ACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIH 346
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
GL + G F++M+ YNIEP +HY+CMVD+L RAG L A+++I+SM FEP P +G
Sbjct: 347 TGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYG 406
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LL A R + NL+ A+ AA+ L+E +P +A YV L+++Y+V + D +RVR K
Sbjct: 407 TLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNA 466
Query: 565 IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLE 623
+ K+PG SW+ +K H F + + L I L + K K + P D++L +E
Sbjct: 467 VVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVE 526
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 152/294 (51%), Gaps = 9/294 (3%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
+ SYN +++ I A+ +F+TMP+R+ S+ M++G + G EAE ++ MP
Sbjct: 72 AVSYNTLLSCHFACG-DIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMP 130
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK-DVVAWGSMVDGYCKKGRVIEAREI 124
AR ++V NA+++ G A +F EK D + W +MV GY G V +A E
Sbjct: 131 AR--NAVSWNAMVAARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEY 188
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFR 183
F MP +N+V+W A+V GY+K D +F +M + N TL+ + C
Sbjct: 189 FRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSA 248
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G QVH + I +G S+++MY + G +D+A K+F M +D V+WN++ISG
Sbjct: 249 LGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISG 308
Query: 244 YVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
Y +G +A +LFE+M + D+++ ++T G + I+ F M E
Sbjct: 309 YAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQE 362
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 314/551 (56%), Gaps = 14/551 (2%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP- 129
S+C N+++S Y + R E A +F++ + ++ +W S++ Y G + A ++F +M
Sbjct: 268 SIC-NSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMES 326
Query: 130 ---EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+ +++ W +++ G++ +E+ S++ G +S ++T +A +
Sbjct: 327 SSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNL 386
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G ++HG + R +YD+ + S++ MY + +++A VF ++ +WNSLISGY +
Sbjct: 387 GKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTY 446
Query: 247 NGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVT 298
G + A +L +M + D V+W ++++G+S G E+++ + N + + V+
Sbjct: 447 KGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVS 506
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA+ISG NE Y +A ++F +M ++V+PN T+S++L A A + L +G +IH +
Sbjct: 507 WTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSM 566
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K D+ I +L+ +YSK G + A+ +F NI E+ + +N M+ G+A G GEE
Sbjct: 567 KHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFT 626
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF M G+ P+ ITF ++LS C + GLV +G+ YF SMKT Y+I P EHY+CMVD+L
Sbjct: 627 LFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLL 686
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
G+AG L EA+D I++M + +WGA+L A R H ++ +A++AA++L LEP ++ YV
Sbjct: 687 GKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYV 746
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
++ ++YS + D R++ ++ SWI ++ +H+F KS + EI
Sbjct: 747 LMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYF 806
Query: 599 TL-QTISKGTK 608
L Q IS+ K
Sbjct: 807 DLYQLISEIKK 817
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 186/410 (45%), Gaps = 28/410 (6%)
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
E A + + + DV ++++ Y K + A ++FD+ P + W +V ++ +
Sbjct: 152 EVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSE 211
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
+ED +L M+ T+ L +ACG+ EG Q+HG V RFG + + N
Sbjct: 212 RWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICN 271
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS 267
SI++MY R ++ A VF + SWNS+IS Y NG + A+ LF M
Sbjct: 272 SIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSI-- 329
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+ D +TW +++SG + YE +
Sbjct: 330 -------------------------KPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGF 364
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ +++S L A N G +IH ++++ +E DV + SLV +Y K + A
Sbjct: 365 KPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEV 424
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + +NI ++NS+ISG+ GL + A L +MK+EG+ + +T+ S++S + G
Sbjct: 425 VFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGC 484
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
EE +K+L + P + M+ + + +A+ + M E
Sbjct: 485 SEEALAVINRIKSL-GLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEE 533
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 11 AMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW-- 68
+++ I N+C + +A +F +N ++ ++I+G+ +G+F AE+L + M
Sbjct: 408 SLVDMYIKNDC-LEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIK 466
Query: 69 RDSVCSNALISGYLKVGRCEEAA----RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
D V N+L+SGY G EEA RI + +VV+W +M+ G C+ +A +
Sbjct: 467 ADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQF 526
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F +M E+NV NS T++ L AC
Sbjct: 527 FSQMQEENVKP-------------------------------NSTTISTLLRACAGPSLL 555
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
++G ++H + GF DI + ++I MY + G + A++VF + ++ WN ++ GY
Sbjct: 556 KKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGY 615
Query: 245 VHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
G EE + LF+ M D +++T +++G + G + + F+ M
Sbjct: 616 AIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSM 666
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 96/205 (46%), Gaps = 3/205 (1%)
Query: 250 IEEAYRLFERMPGK-DFVSWT-TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
+ E + +MP K + V+ +M+ + G+ E + ++F + ++ + W + + F
Sbjct: 47 VRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFA 106
Query: 308 N-NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+ E F E+ K V+ + L+ VL A L G ++HA ++K + DV
Sbjct: 107 SFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDV 166
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ +L++LY KC + A ++F + +N+++ ++ E+AL L R+M+
Sbjct: 167 HLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSA 226
Query: 427 GLVPNQITFLSVLSACNHVGLVEEG 451
T + +L AC + + EG
Sbjct: 227 SAKATDGTIVKLLQACGKLRALNEG 251
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 346 TLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
TLN ++HA ++KM + + V++ S++ Y + G+ A ++F RN + +NS +
Sbjct: 43 TLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFL 102
Query: 405 SGFAQ-NGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
FA G E L +F+++ D+G+ + VL C
Sbjct: 103 EEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKIC 141
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 192/614 (31%), Positives = 319/614 (51%), Gaps = 49/614 (7%)
Query: 19 NNCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD------- 70
+C +A E + +P R+ VS+ A++ G+ R G + + + A +
Sbjct: 197 TSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLP 256
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
+V + G K G+ A+ I + E D V +V+ Y + EA E+F ++ E
Sbjct: 257 TVLKCCMELGLAKYGQSVHASVIKRGL-ETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDE 315
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
+VV +AM+ + + D + DLF+ M G+ N + R V
Sbjct: 316 PDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSV 375
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + + GF +G++I+ MY ++G + +A F ++ + D SWN+++S +
Sbjct: 376 HAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNC 435
Query: 251 EEAYRLFERMPGKDF-------------------------VSWTTMITG----------- 274
E+ R+F++M + F V + +G
Sbjct: 436 EQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRML 495
Query: 275 ---FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
++ G + +F + E+D +WT I+SG+ E+ E+ +F MLR+++RP+
Sbjct: 496 VDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSD 555
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
TL+ LS + A+L G Q+H+ +K S V + +LV +Y KCGN+ DA +F
Sbjct: 556 ATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYVKCGNIADAEMLFHE 614
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ R+ V++N++I G++Q+G G +AL+ F++M DEG P+ ITF+ VLSAC+H GL+ EG
Sbjct: 615 SETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEG 674
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
YFKS+ ++Y I P EHYACMVDIL +AG L EA LIN M P +W +LGA R
Sbjct: 675 RKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACR 734
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
H N+++A+ AA+ L ELEP A+ ++LS++Y+ +G+ D RVR ++K PGC
Sbjct: 735 IHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGC 794
Query: 572 SWIILKDKVHLFLA 585
SWI + ++H+FL+
Sbjct: 795 SWIEINGQIHMFLS 808
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 210/459 (45%), Gaps = 62/459 (13%)
Query: 56 EAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
AEEL R + + + L+ G+ E AR+ + + D S+++ YCK
Sbjct: 46 HAEEL------RLHAAALQDCAVRRTLRRGQ-ELHARLLRSALHPDTFLLDSLLNMYCKC 98
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
GR+++AR +FD MP +++VAWTAM+ + + D+F M + G+A N TL +
Sbjct: 99 GRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVL 158
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+AC + QVHG V + D +G+S++ Y G +D A V + +R V
Sbjct: 159 KACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDV 218
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGK-DFVSWTTMIT--------GFSSKG------- 279
SWN+L++GY +G+ + E++ D +S T+ T G + G
Sbjct: 219 SWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASV 278
Query: 280 -----------------------NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
+ E++ E+F + E D V +A+IS F ++ EA
Sbjct: 279 IKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEAL 338
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
F++M V+PN + ++ T N +HA++VK + ++++++Y
Sbjct: 339 DLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMY 398
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
K G V DA F I E + S+N+++S F E+ L +F++M EG N+ T++
Sbjct: 399 VKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYV 458
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
SVL C +L N+ G + +AC++
Sbjct: 459 SVLRCCT----------------SLMNLRFGTQVHACIL 481
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/531 (22%), Positives = 234/531 (44%), Gaps = 64/531 (12%)
Query: 12 MITALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
++ +L+N C + +A +F MP R+ V++ AMI+ G +A +++ M
Sbjct: 87 LLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMN--- 143
Query: 69 RDSVCSNAL-ISGYLKVGRCEEAARIFEAMVEKDVVAW---------GSMVDGYCKKGRV 118
++ + N ++ LK ++ F V VV S+V+ Y G +
Sbjct: 144 QEGIAPNGFTLASVLKACSGGSHSK-FTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGEL 202
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
A + +PE++ V+W A+++GY + + + + G + TL + + C
Sbjct: 203 DAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCC 262
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ G VH V + G + D +L + ++ MY R +EA +VF + + D V +
Sbjct: 263 MELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCS 322
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKD-------FV------------------------S 267
++IS + + EA LF +M G FV S
Sbjct: 323 AMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKS 382
Query: 268 WTTMITG--------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
M+ G + G ++ + F+++ E D +W I+S F + E+ R F
Sbjct: 383 GFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIF 442
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+M + N+ T SVL + L G+Q+HA ++K +++D + LV +Y++
Sbjct: 443 KQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQS 502
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G A +F + ER+ S+ ++SG+A+ E+ + FR M E + P+ T L
Sbjct: 503 GCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSL 562
Query: 440 SACNHVGLVEEGF-IYFKSMKTLYN--IEPGPEHYACMVDILGRAGSLAEA 487
S C+ + + G ++ ++K+ +N + G +VD+ + G++A+A
Sbjct: 563 SVCSDMASLGSGLQLHSWAIKSGWNSSVVSGA-----LVDMYVKCGNIADA 608
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 177/435 (40%), Gaps = 59/435 (13%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N+ + + + S EA+E+F + + V +AMI+ F R M +EA +L+V M
Sbjct: 290 NSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGM-- 347
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAW-------------GSMVDGYCKKG 116
+ Y+ VG A+R +A + + V A+ ++++ Y K G
Sbjct: 348 -----GVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVG 402
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
V +A FD + E + +W ++ + E G +F M G + N T +
Sbjct: 403 AVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLR 462
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
C R G QVH + + G D + ++ MY + G A VF + +RDA S
Sbjct: 463 CCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFS 522
Query: 237 WNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDFVSW-- 268
W ++SGY E E+ F M G SW
Sbjct: 523 WTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAI 582
Query: 269 -----TTMITG-----FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+++++G + GN+ + LF+ +D V W II G+ + +A
Sbjct: 583 KSGWNSSVVSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDA 642
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYS 377
F +M+ + RP+ +T VLSA + LN+G + + + + + +V + S
Sbjct: 643 FKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILS 702
Query: 378 KCGNVVDAYRIFTNI 392
K G +V+A + +
Sbjct: 703 KAGRLVEAESLINQM 717
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 30/271 (11%)
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
RL D +++ + G L + +F+ MP +D V WTA+IS ++
Sbjct: 75 RLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQ 134
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F M ++ + PN TL+SVL A + + Q+H VVK+N D + +SLV
Sbjct: 135 ALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVE 194
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
Y+ CG + A + + ER+ VS+N++++G+A++G + + K+ G ++ T
Sbjct: 195 AYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYT 254
Query: 435 FLSVLSACNHVGLVEEG-------------------------FIYFKSMKTLYNI----- 464
+VL C +GL + G + S + Y +
Sbjct: 255 LPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRID 314
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
EP H + M+ R EA+DL M+
Sbjct: 315 EPDVVHCSAMISCFDRHDMAWEALDLFVKMS 345
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 329/622 (52%), Gaps = 46/622 (7%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS-----VCSNALISG--YLKVG 85
M + VS+ ++I+ V G EA L+ M +S V + G ++K+G
Sbjct: 211 MEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIG 270
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
R A I ++ DV +++ Y G++ +A +F M K+ V+W ++ G ++
Sbjct: 271 RGIHAV-ILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQ 329
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
D + D + F M+ G + +++ + A GR G++VH + G D ++ +
Sbjct: 330 NDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHI 389
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER------ 259
GNS+I MYG+ + F M ++D +SW ++I+GY N +A L +
Sbjct: 390 GNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKM 449
Query: 260 -----MPGKDFVSWTTM--------ITGFSSKGNLEKSI-------------------EL 287
M G ++ + + I G+ KG L + +
Sbjct: 450 DVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHV 509
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F + KD V+WT++I+ V+N EA F ++ ++ P+ +TL SVL A+AA ++L
Sbjct: 510 FESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSL 569
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
+G +IH +++ + I NSLV +Y++CG + +A IF + +R+++ + SMI+
Sbjct: 570 KKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINAN 629
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
+G G++A++LF KM DE ++P+ ITFL++L AC+H GLV EG +F+ MK Y +EP
Sbjct: 630 GMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPW 689
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
PEHYAC+VD+L R+ SL EA + +M EP VW ALLGA R H N DL ++AA+ L+
Sbjct: 690 PEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLL 749
Query: 528 ELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGR 587
+L +++ YV++S+ ++ G+ D VR K +++K PGCSWI +++K+H F+A
Sbjct: 750 QLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARD 809
Query: 588 KSCLDLKEIEVTLQTISKGTKE 609
KS I + L +K KE
Sbjct: 810 KSHPQCNNIYLKLAQFTKLLKE 831
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 198/386 (51%), Gaps = 43/386 (11%)
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
V Y K G +A ++FDKM E+ + W AM+ + + + +L+ MR G++ ++
Sbjct: 89 VHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDA 148
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-- 226
T + +ACG F R G ++HG+ + G+ + + N++I MY + G + A +F
Sbjct: 149 FTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDS 208
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-------------------GKDFVS 267
+M K D VSWNS+IS +V GE EA LF RM G F+
Sbjct: 209 GLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIK 268
Query: 268 W--------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
+I +++ G +E + +F M KD V+W ++SG V
Sbjct: 269 IGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMV 328
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N+ Y +A F +M +P+Q+++ ++++AS +A L G ++HA+ +K ++S++
Sbjct: 329 QNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMH 388
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I NSL+ +Y KC V F + E++++S+ ++I+G+AQN +ALNL RK++ E
Sbjct: 389 IGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEK 448
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFI 453
+ + + S+L AC+ GL E I
Sbjct: 449 MDVDPMMIGSILLACS--GLKSEKLI 472
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 145/309 (46%), Gaps = 42/309 (13%)
Query: 175 FEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
E C +G Q+H + + + L + MYG+ G +A KVF MS+R
Sbjct: 53 LELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERT 112
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFE--RMPGKDFVSWT---------------------- 269
+WN++I V G EA L++ R+ G ++T
Sbjct: 113 IFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHG 172
Query: 270 ---------------TMITGFSSKGNLEKSIELFN--MMPEKDDVTWTAIISGFVNNEQY 312
+I ++ G+L + LF+ +M + D V+W +IIS V +
Sbjct: 173 VAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGES 232
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA F M V N T S L A + G IHA ++K N +DV + N+L
Sbjct: 233 LEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNAL 292
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+++Y+ CG + DA R+F ++ ++ VS+N+++SG QN + +A+N F+ M+D G P+Q
Sbjct: 293 IAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQ 352
Query: 433 ITFLSVLSA 441
++ L++++A
Sbjct: 353 VSVLNMIAA 361
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 19/276 (6%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T + + G+ ++++F+ M E+ TW A+I V+ +Y EA + EM V
Sbjct: 86 TKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVS 145
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ T VL A A G +IH VK V + N+L+++Y+KCG++ A +
Sbjct: 146 LDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVL 205
Query: 389 FTN--IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
F + +++ + VS+NS+IS G EAL+LFR+M++ G+ N TF+S L AC
Sbjct: 206 FDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQAC---- 261
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYA------CMVDILGRAGSLAEAIDLINSMTFEPPP 500
EG + K + ++ + H+ ++ + G + +A + SM F+
Sbjct: 262 ---EGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCV 318
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
W LL + D+ A H +++ P
Sbjct: 319 S-WNTLLSG---MVQNDMYSDAINHFQDMQDSGQKP 350
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Query: 310 EQYEEAFRWFIEMLRKDVR-PNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVS 367
E ++ +F + L R P Q S L A+ L QG Q+HAH +K N V
Sbjct: 24 EAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVF 83
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ V +Y KCG+ DA ++F + ER I ++N+MI G EA+ L+++M+ G
Sbjct: 84 LDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLG 143
Query: 428 LVPNQITFLSVLSAC 442
+ + TF VL AC
Sbjct: 144 VSLDAFTFPCVLKAC 158
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALI 78
A +F ++ ++ VS+ +MIT V G+ EA EL+ ++ + SV A
Sbjct: 506 ARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAA 565
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
LK G+ I + + ++A S+VD Y + G + AR IF+ + +++++ WT+
Sbjct: 566 LSSLKKGKEIHGFLIRKGFFLEGLIA-NSLVDMYARCGTMENARNIFNYVKQRDLILWTS 624
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
M++ C +D DLF M + + IT L AC EG Q
Sbjct: 625 MINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQ 675
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 296/548 (54%), Gaps = 33/548 (6%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKG-RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
A++ + D A ++D K V A +F ++ + N MV Y +
Sbjct: 32 AQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKCYTESSTP 91
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
E + MRR G+ ++ T + +ACG EG V G + GF D+ + N +
Sbjct: 92 ERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGL 151
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
I+MY R G A VF S++D VSWNS++ GYV GE+E A +F+ MP +D VSW+
Sbjct: 152 ISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWS 211
Query: 270 TMITGFSSK--------------------------------GNLEKSIELFNMMPEKDDV 297
MI G+ K G +E + E+F+ M +K+ +
Sbjct: 212 IMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVI 271
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W+ +I G+ + +EA F +ML + ++P+++++ +SA + L+QG IH ++
Sbjct: 272 SWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYM 331
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+ M D+ +Q +LV +Y KCG+ +A RIF ++ ERN+VS+N MI G NG G+EAL
Sbjct: 332 KRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEAL 391
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
F +M+ E + + + FL VL AC+H LV EG F MK +Y +EP EHY C+VD+
Sbjct: 392 ECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDL 451
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGRAG L + ++I SM +P +WG+LL A R H N+ LA++ + L EL+ D + Y
Sbjct: 452 LGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVY 511
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
V++S++Y+ +G R+R K ++++K G S I + V F++G KS + +EIE
Sbjct: 512 VLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHILREEIE 571
Query: 598 VTLQTISK 605
+ + +++K
Sbjct: 572 LVIWSLAK 579
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 154/290 (53%), Gaps = 14/290 (4%)
Query: 12 MITALINNNCSIYE---AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
++ LI+ C E A +F ++ VS+ +M+ G+V G A+ ++ MP R
Sbjct: 147 VVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPER- 205
Query: 69 RDSVCSNALISGY-LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
D V + +I GY K+G A F++M +D+V+W SM+DGY K G + AREIFDK
Sbjct: 206 -DVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDK 264
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
M +KNV++W+ M+DGY + ++ +LF M G+ + +++ AC + +G
Sbjct: 265 MLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQG 324
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+H + R DI++ +++ MY + G DEA ++F+ M +R+ VSWN +I G N
Sbjct: 325 RWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMN 384
Query: 248 GEIEEAYRLF-----ERMPGKDFVSWTTMITGFSSKGNL-EKSIELFNMM 291
G +EA F ER+P D + ++ S NL + + +FN M
Sbjct: 385 GFGKEALECFTQMEMERIPMDDLLFLGVLMA--CSHANLVTEGLHIFNQM 432
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 284/527 (53%), Gaps = 34/527 (6%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A+I ++ + D+ ++ + +++ A F+++ NV + M+ +
Sbjct: 41 AQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIRAHSHNSQPS 100
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
F F +M+R G ++ T L + C VH + +FGF D+ + NS+I
Sbjct: 101 QAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLI 160
Query: 211 TMYGRLG----------------------------------FMDEANKVFSMMSKRDAVS 236
Y + G +EA KVF M ++D +S
Sbjct: 161 DSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEKDGIS 220
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
WN+++ GYV G++++A++LF+ MP ++ VSW+TM+ G+ G++E + LF+ MP K+
Sbjct: 221 WNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNL 280
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+WT I+SGF EA F +M + ++ + T+ S+L+A A + L G +IHA
Sbjct: 281 VSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHAS 340
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+ N + I N+LV +Y+KCG + AY +F +I +++VS+N+M+ G A +G G +A
Sbjct: 341 IKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKA 400
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L LF++MK+EG PN++T + VL AC H GL+++G YF +M+ Y + P EHY CMVD
Sbjct: 401 LELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVD 460
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+LGR G L EAI LI +M P +WG LLGA R H ++LA+ HL+ELEP +
Sbjct: 461 LLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTDSGN 520
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ +LS++Y+ G R++ + +K G S I + ++VH F
Sbjct: 521 FSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVHEF 567
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 193/374 (51%), Gaps = 20/374 (5%)
Query: 20 NCSIYEAFEIFATM-PMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI 78
+C I A ++F +M R+ VS+ +MI+G + G++ EA +++ MP + D + N ++
Sbjct: 168 SCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEK--DGISWNTML 225
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
GY+KVG+ ++A ++F+ M E++VV+W +MV GYCK G + AR +FDKMP KN+V+WT
Sbjct: 226 DGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTI 285
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+V G+ + + LF M + + ++ T+ + AC G ++H +
Sbjct: 286 IVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNN 345
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
F + N+++ MY + G ++ A VF+ + +D VSWN+++ G +G +A LF+
Sbjct: 346 FKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFK 405
Query: 259 RMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM-------PEKDDVTWTAIISGFV 307
RM + F V+ ++ + G ++ I F+ M PE + + ++
Sbjct: 406 RMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEH--YGCMVDLLG 463
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
+ EEA R M + PN + ++L A + ++ H+V++ +D
Sbjct: 464 RKGRLEEAIRLIRNM---PMAPNAIIWGTLLGACRMHNAVELAREVLDHLVELE-PTDSG 519
Query: 368 IQNSLVSLYSKCGN 381
+ L ++Y+ G+
Sbjct: 520 NFSMLSNIYAAAGD 533
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L LS LNQ Q+HA ++K N+ D+ + L+S +S C ++ A F +
Sbjct: 20 LEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQ 79
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
N+ YN+MI + N +A F M+ +G + TF +L C
Sbjct: 80 YPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVC 128
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 194/610 (31%), Positives = 314/610 (51%), Gaps = 51/610 (8%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVNMPARWRDSVCSNALISGY 81
+F +P ++ V++ MI+G V+ G +FY+ E V +V S I +
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPF 264
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L+ G+ + A I EKD ++D Y K GRV A ++FD MP KN+++WT ++
Sbjct: 265 LEGGK-QIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLS 323
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY + ++ +LF SM + G+ + + + +C G QVH +
Sbjct: 324 GYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGN 383
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG---EIEEAYRLFE 258
D + NS+I MY + + EA KVF + + D V +N++I GY G E+ +A +F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFH 443
Query: 259 RMPGK---------------------------------------DFVSWTTMITGFSSKG 279
M + D + + +I +S+
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCY 503
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
L+ S +F+ M KD V W ++ SG+V + EEA F+E+ RP++ T +++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVT 563
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A+ A+L G + H ++K +E + I N+L+ +Y+KCG+ DA++ F + R++V
Sbjct: 564 AAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+NS+IS +A +G G +AL + KM EG+ PN ITF+ VLSAC+H GLVE+G F+ M
Sbjct: 624 WNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
+ IEP EHY CMV +LGRAG L EA +LI M +P VW +LL N++LA
Sbjct: 684 R-FGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
+ AA+ + +P + + +LS++Y+ G D +VR + K + + K PG SWI + +
Sbjct: 743 EYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKE 802
Query: 580 VHLFLAGRKS 589
VH+FL+ KS
Sbjct: 803 VHIFLSKDKS 812
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 245/514 (47%), Gaps = 54/514 (10%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV- 84
A ++F MP RN V+++ M++ G + E+ ++++ R R + + ++S +++
Sbjct: 98 ARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDF-WRTRKNSPNEYILSSFIQAC 156
Query: 85 ------GR---CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
GR + + + ++ ++DV ++D Y K+G + AR +FD +PEK+ V
Sbjct: 157 SGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVT 216
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT M+ G +K+ LF + G + + L+ + AC G Q+H +
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R+G + D L N +I Y + G + A+K+F M ++ +SW +L+SGY N +EA
Sbjct: 277 RYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAME 336
Query: 256 LFERMP---------------------------------------GKDFVSWTTMITGFS 276
LF MP G D ++I ++
Sbjct: 337 LFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVN-NEQYE--EAFRWFIEMLRKDVRPNQLT 333
L ++ ++F++ D V + A+I G+ Q+E +A F +M + +RP+ LT
Sbjct: 397 KCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLT 456
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
S+L ASA+ +L QIH + K + D+ ++L+++YS C + D+ +F +
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMK 516
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+++V +NSM SG+ Q EEALNLF +++ P++ TF+ +++A ++ ++ G
Sbjct: 517 VKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLG-Q 575
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
F +E P ++D+ + GS +A
Sbjct: 576 EFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 197/400 (49%), Gaps = 53/400 (13%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+I + +E D +++ Y + G ++ AR++F+KMPE+N+V W+ MV +E
Sbjct: 68 GQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYE 127
Query: 151 DGFDLFLSM-RRGGMAFNSITLTILFEAC------GRFFRYREGVQVHGLVSRFGFDYDI 203
+ +FL R + N L+ +AC GR+ + Q+ + + FD D+
Sbjct: 128 ESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVF----QLQSFLVKSRFDRDV 183
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-ERMPG 262
+G +I Y + G +D A VF + ++ V+W ++ISG V G + +LF + M G
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEG 243
Query: 263 --------------------------------------KDFVSWTTMITGFSSKGNLEKS 284
KD +I + G + +
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAA 303
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+LF+ MP K+ ++WT ++SG+ N ++EA F M + ++P+ SS+L++ A+
Sbjct: 304 HKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASL 363
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L G+Q+HA+ +K N+ +D + NSL+ +Y+KC + +A ++F ++V +N+MI
Sbjct: 364 HALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMI 423
Query: 405 SGFAQNGLG---EEALNLFRKMKDEGLVPNQITFLSVLSA 441
G+++ G +ALN+F M+ + P+ +TF+S+L A
Sbjct: 424 EGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRA 463
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 170/344 (49%), Gaps = 51/344 (14%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG + G + D L N ++ +Y R G M A KVF M +R+ V+W++++S H+G
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 250 IEEAYRLF-------ERMPGKDFVS--------------W-------------------- 268
EE+ +F + P + +S W
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185
Query: 269 -TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T +I + +GN++ + +F+ +PEK VTWT +ISG V + + + F +++ +V
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ LS+VLSA + L G QIHAH+++ E D S+ N L+ Y KCG V A++
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHK 305
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + +NI+S+ +++SG+ QN L +EA+ LF M GL P+ S+L++C +
Sbjct: 306 LFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHA 365
Query: 448 VEEGFIYFKSMKTLYNIEP--GPEHYAC--MVDILGRAGSLAEA 487
+E F + Y I+ G + Y ++D+ + L EA
Sbjct: 366 LE-----FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEA 404
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/593 (32%), Positives = 321/593 (54%), Gaps = 20/593 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
EA ++F + +N V++ +MI F + G+ EA E + M R + +S +L
Sbjct: 234 EAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEM--RVEGVAPTQVTLSSFLSA 291
Query: 85 ---------GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G+ A + + +++ S+++ Y K G V +A +F +M EK+ V
Sbjct: 292 SANLSVIDEGKQGHALAVLSGLELTNILG-SSLINFYSKVGLVEDAELVFSEMLEKDTVT 350
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W +V GY+ + DL M+ + F+S+TL + A + G + H
Sbjct: 351 WNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCV 410
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R + D+ + +SII MY + ++ A +VF +KRD + WN+L++ Y G E +
Sbjct: 411 RNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLK 470
Query: 256 LFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVTWTAIISGFV 307
LF +M + +SW ++I G +KG ++++ + F M + +TWT +I G
Sbjct: 471 LFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNLITWTTLICGLA 530
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N +EAF F M ++PN L++SS+LSA + A+L G IH ++ + +
Sbjct: 531 QNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTP 590
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ SLV++Y+KCG++ A R+F I ++ + YN+MISG+A +G EAL+LFR++K+E
Sbjct: 591 VLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEEC 650
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ P++ITF S+LSAC H GLV EG F M + + I EHY C+V IL R+ +L EA
Sbjct: 651 IKPDEITFTSILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEA 710
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ +I M FEP ++G+LL A R H + +L + + L++LEPD++ YV LS+ Y+
Sbjct: 711 LRIILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAAT 770
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
G + ++VR K + + K PG S I + +K H+F AG KS KEI + L
Sbjct: 771 GMWDEASKVRGLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMML 823
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 230/479 (48%), Gaps = 44/479 (9%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F K+ +N +W A++ ++ ++ F M G+ ++ + I F+A G
Sbjct: 134 ANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGA 193
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G VH V + G I + S++ MYG+ G +EA KVF + +++ V+WNS+
Sbjct: 194 LRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSM 253
Query: 241 ISGYVHNGEIEEAYRLFERM------PGK----DFVS----------------------- 267
I + NG EA F M P + F+S
Sbjct: 254 IVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGL 313
Query: 268 ------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+++I +S G +E + +F+ M EKD VTW ++SG+V+N + A
Sbjct: 314 ELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHV 373
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M +++R + +TL+S+++A+A + L G + H+ V+ N+ESDV++ +S++ +Y+KC
Sbjct: 374 MQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEK 433
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ A R+F +R+++ +N++++ +A+ G E L LF +M+ EGL PN I++ SV+
Sbjct: 434 LECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVILG 493
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT---FEP 498
+ G V++ F M++L I P + ++ L + G EA SM +P
Sbjct: 494 LLNKGKVDQAKDTFMEMQSL-GICPNLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKP 552
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV-LSDLYSVIGKKRDGNRV 556
+LL A T +L + ++ E +TP + L ++Y+ G RV
Sbjct: 553 NSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRV 611
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 217/449 (48%), Gaps = 20/449 (4%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
S++D Y K G EA+++FDK+ EKN+VAW +M+ + + + + F MR G+A
Sbjct: 221 SLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAP 280
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+TL+ A EG Q H L G + ILG+S+I Y ++G +++A VF
Sbjct: 281 TQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVF 340
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLE 282
S M ++D V+WN L+SGYVHNG ++ A L M + D V+ +++ + NL+
Sbjct: 341 SEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLK 400
Query: 283 KSIELFNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
E + E D ++II + E+ E A R F ++D+ L++
Sbjct: 401 LGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYA 460
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE---- 394
+ TL Q+ + N+ +S + ++ L +K G V A F +
Sbjct: 461 EQGHSGETLKLFYQMQLEGLPPNV---ISWNSVILGLLNK-GKVDQAKDTFMEMQSLGIC 516
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
N++++ ++I G AQNGLG+EA F+ M++ G+ PN ++ S+LSAC+ + + G
Sbjct: 517 PNLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRA- 575
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
T + + +V++ + GS+ +A + + + + P V+ A++ H
Sbjct: 576 IHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELP-VYNAMISGYALHG 634
Query: 515 NLDLAKLAAQHLME--LEPDSATPYVVLS 541
A + L E ++PD T +LS
Sbjct: 635 QAVEALSLFRRLKEECIKPDEITFTSILS 663
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
IS EA ++ +D+ +L L+ G QIH ++K N
Sbjct: 50 ISSLCKQGHLLEALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRILK-NG 108
Query: 363 ES---DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
ES + I+ LV YSKC A R+F + +N S+ +++ ++ G +EAL
Sbjct: 109 ESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMG 168
Query: 420 FRKMKDEGLV 429
FR+M + GL+
Sbjct: 169 FREMHEYGLL 178
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 321/584 (54%), Gaps = 40/584 (6%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG-------------------- 116
L+S Y G +E R+F+ M +K+V W MV Y K G
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 199
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
R A E+FDK+ +++V++W +M+ GY+ E G ++ M G+ + T+ +
Sbjct: 200 RPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
C G VH L + F+ I N+++ MY + G +D A +VF M +R+ VS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP 292
W S+I+GY +G + A +L ++M + D V+ T+++ + G+L+ ++ + +
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 379
Query: 293 ----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV----------RPNQLTLSSVL 338
E + A++ + E A F M+ KD+ +P+ T++ VL
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVL 439
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A A+ + L +G +IH ++++ SD + N+LV LY KCG + A +F I +++V
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 499
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+ MI+G+ +G G EA+ F +M+D G+ P++++F+S+L AC+H GL+E+G+ +F M
Sbjct: 500 SWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM 559
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
K +NIEP EHYACMVD+L R G+L++A + + ++ P +WGALL R + +++L
Sbjct: 560 KNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIEL 619
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
A+ A+ + ELEP++ YV+L+++Y+ K + R+R K + +RK+PGCSWI +K
Sbjct: 620 AEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKG 679
Query: 579 KVHLFLAGRKSCL-DLKEIEVTLQTISKGTK-EFDWPKHDWSLL 620
KV+LF++G S K IE L+ + + K E +PK ++L+
Sbjct: 680 KVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALI 723
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 202/422 (47%), Gaps = 34/422 (8%)
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ V + A + + ++ E+ +L ++ + T + + C + +G +
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCQKS--ELETKTYGSVLQLCAGLKSFTDGKK 120
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VH ++ D LG +++ Y G + E +VF M K++ WN ++S Y G+
Sbjct: 121 VHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+E+ LF+ M K G K E + ELF+ + ++D ++W ++ISG+V+N
Sbjct: 181 FKESICLFKIMVEK----------GIEGK-RPESAFELFDKLCDRDVISWNSMISGYVSN 229
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
E + +M+ + + T+ SVL A + TL+ G +H+ +K + E ++
Sbjct: 230 GLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N+L+ +YSKCG++ A R+F + ERN+VS+ SMI+G+ ++G + A+ L ++M+ EG+
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVK 349
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
+ + S+L AC G ++ G +K N+E ++D+ + GS+ A
Sbjct: 350 LDVVAITSILHACARSGSLDNGKDVHDYIKA-NNMESNLFVCNALMDMYAKCGSMEAANS 408
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
+ ++M + W ++G EL+PDS T VL S+
Sbjct: 409 VFSTMVVKDIIS-WNTMIG-------------------ELKPDSRTMACVLPACASLSAL 448
Query: 550 KR 551
+R
Sbjct: 449 ER 450
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 192/403 (47%), Gaps = 47/403 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALI 78
AFE+F + R+ +S+ +MI+G+V G+ +Y M D SV
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
SG L +G+ + I ++ E+ + +++D Y K G + A +F+KM E+NVV+WT+
Sbjct: 264 SGTLSLGKAVHSLAI-KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY + + L M + G+ + + +T + AC R G VH +
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL-- 256
+ ++ + N+++ MY + G M+ AN VFS M +D +SWN++I GE++ R
Sbjct: 383 MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI------GELKPDSRTMA 436
Query: 257 -----------FERMPGKDFVSWTTMITGFSSKGNLEKSIE--------------LFNMM 291
ER GK+ + + G+SS ++ ++ LF+M+
Sbjct: 437 CVLPACASLSALER--GKEIHGY-ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
P KD V+WT +I+G+ + EA F EM + P++++ S+L A + + L QG
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 352 QIHAHVVK--MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
+ +++K N+E + +V L S+ GN+ AY +
Sbjct: 554 RFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETL 595
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/544 (34%), Positives = 284/544 (52%), Gaps = 71/544 (13%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + A +F+ + + N W M+ G D ++ M G+ NS T L
Sbjct: 80 GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY---GRLGF-------------- 218
++C + +EG Q+HG V + G + D + S+I MY G LG+
Sbjct: 140 KSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAV 199
Query: 219 --------------MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--- 261
+D+A ++F + RDAVSWN++I+GY +G EEA F+ M
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN 259
Query: 262 -----------------------GKDFVSW-------------TTMITGFSSKGNLEKSI 285
G SW +I +S G+L+K+
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKAR 319
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+LF + EKD ++W +I G+ + Y+EA F +M + +V PN +T S+L A A
Sbjct: 320 DLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLG 379
Query: 346 TLNQGSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L+ G IHA++ K + ++ S+ SL+ +Y+KCGN+ A ++F + +++ S+N+MI
Sbjct: 380 ALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMI 439
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
SG A +G AL LFR+M+DEG P+ ITF+ VLSAC+H GLVE G F SM Y+I
Sbjct: 440 SGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDI 499
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
P +HY CM+D+LGRAG EA L+ +M +P +WG+LLGA R H N++L + AA+
Sbjct: 500 SPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAK 559
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
HL ELEP++ YV+LS++Y+ G+ D R+R K K ++K PGCS I + VH FL
Sbjct: 560 HLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFL 619
Query: 585 AGRK 588
G K
Sbjct: 620 VGDK 623
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 211/489 (43%), Gaps = 79/489 (16%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIF 94
N+ ++ ++ + G E ++++ V D +LI+ Y + G A +F
Sbjct: 131 NSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVF 190
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
+D V++ +++ GY +G + +AR +F+++P ++ V+W AM+ GY + FE+
Sbjct: 191 SKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALA 250
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
F M+R +A N T+ + AC + G V + G ++ L N++I MY
Sbjct: 251 FFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYS 310
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD-------FVS 267
+ G +D+A +F + ++D +SWN +I GY H +EA LF +M + FVS
Sbjct: 311 KCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVS 370
Query: 268 ---------------------------------WTTMITGFSSKGNLEKSIELFNMMPEK 294
WT++I ++ GN+E + ++F M K
Sbjct: 371 ILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPK 430
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
+W A+ISG + A F +M + P+ +T VLSA + + G Q
Sbjct: 431 SLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCF 490
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+ +V+ + D+S + + Y MI + GL +
Sbjct: 491 SSMVE---DYDISPK---------------------------LQHYGCMIDLLGRAGLFD 520
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GPEHYAC 473
EA L + M+ + P+ + S+L AC G VE G + K L+ +EP P Y
Sbjct: 521 EAEALMKNME---MKPDGAIWGSLLGACRVHGNVELGEF---AAKHLFELEPENPGAYVL 574
Query: 474 MVDILGRAG 482
+ +I AG
Sbjct: 575 LSNIYATAG 583
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 202/438 (46%), Gaps = 62/438 (14%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
T+LIN N + A +F+ +R+AVS+ A+ITG+ RG +A L+ +P RD
Sbjct: 171 TSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPV--RD 228
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVV--------------------------A 104
+V NA+I+GY + GR EEA F+ M +V +
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288
Query: 105 W-------------GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
W +++D Y K G + +AR++F+ + EK++++W M+ GY ++ +++
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV-SRFGFDYDIILGNSII 210
LF M++ + N +T + AC G +H + +F + L S+I
Sbjct: 349 ALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLI 408
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----V 266
MY + G ++ A +VF+ M + SWN++ISG +G A LF +M + F +
Sbjct: 409 DMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDI 468
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIE 321
++ +++ S G +E + F+ M E D++ + +I ++EA E
Sbjct: 469 TFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA-----E 523
Query: 322 MLRK--DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
L K +++P+ S+L A + G H+ ++ E+ + L ++Y+
Sbjct: 524 ALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYV-LLSNIYATA 582
Query: 380 GNVVDAYRIFTNIDERNI 397
G D RI T ++++ +
Sbjct: 583 GRWDDVARIRTKLNDKGM 600
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSL--YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
QIH+ ++K + + + L+ S GN+ A +F +I++ N +N+MI G +
Sbjct: 50 QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSL 109
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+ A++ + +M G+ PN TF +L +C VG +EG + L +E P
Sbjct: 110 SSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKL-GLESDPF 168
Query: 470 HYACMVDILGRAGSLAEA 487
+ ++++ + G L A
Sbjct: 169 VHTSLINMYAQNGELGYA 186
>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 330/616 (53%), Gaps = 30/616 (4%)
Query: 20 NCSIYEAFEIFATMPMRNAVS-----YAAMITGFVRRGMFYEAEELYVNMPARWRDSVCS 74
NC E ++ ++ +R +S +++T FV+ G A + + NM R D V
Sbjct: 192 NCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDER--DGVSW 249
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKD----VVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
N +I+GY + G +EA R+ + M + +V + M+ Y + G ++ KM
Sbjct: 250 NVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMES 309
Query: 131 ----KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+V WT+M+ G+ + D F M G+ N+IT+ AC +
Sbjct: 310 VGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQN 369
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G+++H + G + ++GNS+I MY + G ++ A VF + ++D +WNS+I GY
Sbjct: 370 GLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQ 429
Query: 247 NGEIEEAYRLFER------MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE-----KD 295
G +AY LF R MP + V+W MI+G G+ +++++LF +M + ++
Sbjct: 430 AGYGGKAYELFMRLRESTVMP--NVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRN 487
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
+W ++I+G+ + +A F +M + PN +T+ S+L A A + +IH
Sbjct: 488 TASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHG 547
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
V++ N+ES++++ NSLV Y+K GN+ + +F + ++I+++NS+I+G+ +G +
Sbjct: 548 CVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDS 607
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
A LF +M++ G+ PN+ T S++ A G+V++G F S+ + I P +HY MV
Sbjct: 608 AFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMV 667
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D+ GR+G LA+AI+ I M EP +W +LL A R H NL+LA LAA+ L ELEPD+
Sbjct: 668 DLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHV 727
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
Y +L Y++ GK +VR K ++K W+ +++KVHLF+ G +S LD+
Sbjct: 728 IYRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLFVTGDQSKLDV-- 785
Query: 596 IEVTLQTISKGTKEFD 611
+ +++I K+F+
Sbjct: 786 LNTWIKSIEGKVKKFN 801
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 216/404 (53%), Gaps = 15/404 (3%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+V Y K G + +AR++FD M E+N+ W+AM+ Y + +++ +LF M G+ +
Sbjct: 120 LVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPD 179
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ + +ACG +H LV R G + L NSI+T + + G + A K F
Sbjct: 180 AFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFG 239
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKG---- 279
M +RD VSWN +I+GY G +EA RL + M + F V++ MI +S G
Sbjct: 240 NMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDL 299
Query: 280 --NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
+L+K +E + P D TWT++ISGF + + +A +F +M+ V PN +T++S
Sbjct: 300 VIDLKKKMESVGLAP--DVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASA 357
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
SA A+ +L G +IH +KM + + + NSL+ +YSKCG + A +F I E+++
Sbjct: 358 TSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDV 417
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
++NSMI G+ Q G G +A LF ++++ ++PN +T+ +++S C G ++ F+
Sbjct: 418 YTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQI 477
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL---INSMTFEP 498
M+ ++ + ++ + G +A+ + + S+ F P
Sbjct: 478 MEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSP 521
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 156/322 (48%), Gaps = 25/322 (7%)
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA-VSWNS 239
FF Y+ L S+F D+ L ++ G + EA +SKR + +S N+
Sbjct: 38 FFTYK-------LTSKFNDDHLSYLCSN--------GLLREAITAIDSISKRGSKLSTNT 82
Query: 240 ---LISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
L+ + G IE L RM FV T +++ ++ G L+ + ++F+ M
Sbjct: 83 YINLLQTCIDVGSIELGRELHVRMGLVHRVNPFVE-TKLVSMYAKCGCLKDARKVFDGMQ 141
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
E++ TW+A+I + ++++E F M+ V P+ +L A L
Sbjct: 142 ERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKL 201
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
IH+ V++ + + + NS+++ + KCG + A + F N+DER+ VS+N MI+G+ Q G
Sbjct: 202 IHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGN 261
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
G+EA L M ++G P +T+ ++++ + +G + K M+++ + P +
Sbjct: 262 GDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESV-GLAPDVYTWT 320
Query: 473 CMVDILGRAGSLAEAIDLINSM 494
M+ ++ +++A+D M
Sbjct: 321 SMISGFSQSSRISQALDFFKKM 342
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/650 (32%), Positives = 333/650 (51%), Gaps = 62/650 (9%)
Query: 17 INNNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR 69
I +C + A +F M R+ VS+ A I + G A EL+ M PAR
Sbjct: 172 IYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARI- 229
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
++ + ++ R + + E+ +E+ +V ++ Y + G + +A+E+FD+
Sbjct: 230 -TLVITLSVCAKIRQARAIHSI-VRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAA 287
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E++VV+W AM+ Y + + LF M G+ + +TL C R G
Sbjct: 288 ERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSL---RFGRM 344
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H G D DI+LGN+++ MY R G +EA +F + +AVSWN++I+G G+
Sbjct: 345 IHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQ 403
Query: 250 IEEAYRLFERMP------------------------------GKDFVS------------ 267
++ A LF+RM G+ S
Sbjct: 404 MKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPA 463
Query: 268 -WTTMITGFSSKGNLEKSIELFN---MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
T ++ ++S G ++++ F M D V+W AIIS + + A +F M
Sbjct: 464 IGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMD 523
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
V PNQ+T +VL A A A L +G +H H+ MES+V + +L S+Y +CG++
Sbjct: 524 LHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLE 583
Query: 384 DAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A IF + ER++V +N+MI+ ++QNGL EAL LF +M+ EG P++ +F+SVLSAC
Sbjct: 584 SAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSAC 643
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GL +EG+ F+SM+ Y I P +HYAC VD+LGRAG LA+A +LI M +P V
Sbjct: 644 SHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLV 703
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W LLGA R + ++D +LA + EL+P + YVVLS++ + GK + VR + +
Sbjct: 704 WKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMES 763
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+ +RK G SWI +K +VH F+AG +S +EI L+ + +E +
Sbjct: 764 RGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGY 813
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/547 (22%), Positives = 228/547 (41%), Gaps = 117/547 (21%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE---- 130
N L+ YLK + +F + +D +W +++ Y + G+ A +F +M +
Sbjct: 66 NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVR 125
Query: 131 ----------------------KNVVAWTA-------------MVDGYMKVDCFEDGFDL 155
+++ AW ++ Y C L
Sbjct: 126 CDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLL 185
Query: 156 FLSMRRGGMAFNS------------------------------ITLTILFEACGRFFRYR 185
F M R +++N+ ITL I C + R
Sbjct: 186 FERMERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKI---R 242
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+ +H +V G + +++ ++ + Y RLG +D+A +VF ++RD VSWN+++ Y
Sbjct: 243 QARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYA 302
Query: 246 HNGEIEEAYRLFERM------PGK------------------------------DFVSWT 269
+G + EA LF RM P K D V
Sbjct: 303 QHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGN 362
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
++ ++ G+ E++ LF +P + V+W +I+G Q + A F M + + P
Sbjct: 363 ALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAP 421
Query: 330 NQLTLSSVLSASAATA----TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ T ++L A A+ + +G ++H+ +V S+ +I ++V +Y+ CG + +A
Sbjct: 422 VRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEA 481
Query: 386 YRIFTN--IDER-NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
F +++R ++VS+N++IS +Q+G G+ AL FR+M G+ PNQIT ++VL AC
Sbjct: 482 AASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDAC 541
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+ EG I ++ +E + + GR GSL A ++ + E +
Sbjct: 542 AGAAALTEGVIVHDHLRH-SGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVI 600
Query: 503 WGALLGA 509
+ A++ A
Sbjct: 601 FNAMIAA 607
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 165/374 (44%), Gaps = 62/374 (16%)
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L L A G +G ++H + G + + LGN ++ +Y + + + +VFS +
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLE 89
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKD 264
RD SW ++I+ Y +G+ + A +F RM G+
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 265 FVSWTT-------------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
+W ++ + S G + ++ LF M E+D V+W A I+ +
Sbjct: 150 IHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGD 208
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
+ A F M + VRP ++TL LS A + Q IH+ V + +E + + +
Sbjct: 209 LDMALELFQRMQLEGVRPARITLVITLS---VCAKIRQARAIHSIVRESGLEQTLVVSTA 265
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
L S Y++ G++ A +F ER++VS+N+M+ +AQ+G EA LF +M EG+ P+
Sbjct: 266 LASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPS 325
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA----CMVDILGRAGSLAEA 487
++T ++ + C+ + F M +E G + ++D+ R GS EA
Sbjct: 326 KVTLVNASTGCSS--------LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEA 377
Query: 488 IDLINSMTFEPPPG 501
L FE PG
Sbjct: 378 RHL-----FEGIPG 386
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 137/269 (50%), Gaps = 22/269 (8%)
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
S G++E E+F+ + +D+ +WT II+ + + Q + A F M ++ VR + +T +
Sbjct: 77 SLGDVE---EVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLA 133
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
VL A A L+QG IHA +V+ +E + N L+ +Y CG V A +F + ER+
Sbjct: 134 VLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERD 192
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+VS+N+ I+ AQ+G + AL LF++M+ EG+ P +IT + LS C + +
Sbjct: 193 LVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKI----------R 242
Query: 457 SMKTLYNI--EPGPEHY----ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
+ +++I E G E + R G L +A ++ + E W A+LGA
Sbjct: 243 QARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAA-ERDVVSWNAMLGAY 301
Query: 511 RTHLNL-DLAKLAAQHLMELEPDSATPYV 538
H ++ + A L A+ L E P S V
Sbjct: 302 AQHGHMSEAALLFARMLHEGIPPSKVTLV 330
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 116/222 (52%), Gaps = 19/222 (8%)
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
RP L +L A+ L+QG +IHA +V + +E ++ N L+ LY KC ++ D
Sbjct: 27 TRPAHLV--RLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVE 82
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+F+ ++ R+ S+ ++I+ + ++G + A+ +F +M+ EG+ + +TFL+VL AC +G
Sbjct: 83 EVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLG 142
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL----GRAGSLAEAIDLINSMTFEPPPGV 502
+ +G +S+ + +E G E + + ++L G G +A A+ L M E
Sbjct: 143 DLSQG----RSIHA-WIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM--ERDLVS 195
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELE---PDSATPYVVLS 541
W A + A +LD+A L M+LE P T + LS
Sbjct: 196 WNAAIAANAQSGDLDMA-LELFQRMQLEGVRPARITLVITLS 236
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/659 (29%), Positives = 339/659 (51%), Gaps = 52/659 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + S N MI I + ++ EA +F +M R AV++ +I G+ + F EA L
Sbjct: 127 MPHKNIFSTNTMIMGYIKSG-NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGL 185
Query: 61 YVNMPARW--RDSVCSNALISGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCK 114
++ M D V L+SG+ + E ++ ++ + +V S++D YCK
Sbjct: 186 FIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCK 245
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
+ A ++F+ +PE++ V + A++ GY K + +LF M+ G T +
Sbjct: 246 TRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAI 305
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
A + G QVHG V + F +++ + N+++ Y + + EA+K+F M + D
Sbjct: 306 LTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDG 365
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMP--------------------------GKDFVSW 268
+S+N L++ Y NG ++E+ LF+ + G+ S
Sbjct: 366 ISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQ 425
Query: 269 T-------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
T +++ ++ G ++ +F+ + + V WTA+IS +V +E+
Sbjct: 426 TIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDG 485
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+ F+EM R + + T +S++ A A+ A+L G Q+H+H++ S+V ++LV +
Sbjct: 486 LKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDM 545
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y+KCG++ DA ++F + RN VS+N++IS +AQNG G+ L LF +M GL P+ ++
Sbjct: 546 YAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSL 605
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
LS+L AC+H GLVEEG YF SM +Y + P EHYA +D+L R G EA L+ M
Sbjct: 606 LSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMP 665
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEP-DSATPYVVLSDLYSVIGKKRDGN 554
FEP +W ++L + H N +LAK AA L ++ A PYV +S++Y+ G+ +
Sbjct: 666 FEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVG 725
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI-----EVTLQTISKGTK 608
+V+ + + ++K P SW+ +K K H+F A K+ ++EI E+ + + KG K
Sbjct: 726 KVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYK 784
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/519 (26%), Positives = 251/519 (48%), Gaps = 65/519 (12%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN L+ +L+ G A ++F+ M K++ + +M+ GY K G + EAR +FD M ++
Sbjct: 104 SNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTA 163
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V WT ++ GY + + F + F LF+ M R G+ + ++L L F E QVH
Sbjct: 164 VTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSH 223
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V + G+D +++ NS++ Y + + A ++F+ + +RD+V++N+L++GY G EA
Sbjct: 224 VIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREA 283
Query: 254 YRLFERM------PGK-------------DFVSWTTMITGFSSKGNL------------- 281
LF +M P + D + + + GF K N
Sbjct: 284 INLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDF 343
Query: 282 ----EKSIE---LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ +E LF MPE D +++ +++ + N + +E+ F E+
Sbjct: 344 YSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPF 403
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+++LS +A + L+ G QIH+ + + S++ + NSLV +Y+KCG +A RIF+++
Sbjct: 404 ATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAI 463
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN----------- 443
++ V + +MIS + Q GL E+ L LF +M+ + + T+ S++ AC
Sbjct: 464 QSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQL 523
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H ++ G+I N+ G + +VD+ + GS+ +A+ + M W
Sbjct: 524 HSHIIGSGYI--------SNVFSG----SALVDMYAKCGSIKDALQMFQEMPVRNSVS-W 570
Query: 504 GALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVL 540
AL+ A + + D + ++ L+PDS + +L
Sbjct: 571 NALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSIL 609
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 184/358 (51%), Gaps = 44/358 (12%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N L+ ++ G++ A +LF+ MP K+ S TMI G+ GNL ++ LF+ M ++ V
Sbjct: 105 NFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAV 164
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
TWT +I G+ N Q+ EAF FIEM R + P+ ++L+++LS ++N+ Q+H+HV
Sbjct: 165 TWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHV 224
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+K+ +S + + NSL+ Y K ++ A+++F +I ER+ V++N++++G+++ G EA+
Sbjct: 225 IKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAI 284
Query: 418 NLFRKMKDEGLVPNQITFLSVLSA-------------------CNHV--GLVEEGFIYFK 456
NLF KM++ G P + TF ++L+A CN V V + F
Sbjct: 285 NLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFY 344
Query: 457 SM--------KTLYNIEPGPE----HYACMVDILGRAGSLAEAIDLINSMT---FEPPPG 501
S K Y + PE Y +V G + E+++L + F+
Sbjct: 345 SKHDRVVEASKLFYEM---PEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNF 401
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV---LSDLYSVIGKKRDGNRV 556
+ LL LNLD+ + H + D+ + +V L D+Y+ G+ + NR+
Sbjct: 402 PFATLLSIAAISLNLDIGRQI--HSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRI 457
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 201/619 (32%), Positives = 327/619 (52%), Gaps = 53/619 (8%)
Query: 20 NCSIY-EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI 78
NC ++ +A ++F MP R+ VS+ +I G + EA + M A +
Sbjct: 184 NCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTV 243
Query: 79 SGYLKVGRCEEA-----ARIFEAMVEK------DVVAWGSMVDGYCKKGRVIEAREIFDK 127
L V C E ARI K V ++VD Y K G ++++FD+
Sbjct: 244 VSVLPV--CAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDE 301
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
+ E+NV++W A++ + + D D+F M GM NS+T++ + G ++ G
Sbjct: 302 IDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLG 361
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++VHG + + D+ + NS+I MY + G A+ +F+ M R+ VSWN++I+ + N
Sbjct: 362 MEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARN 421
Query: 248 GEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLE-------------KSIELF-- 288
EA L +M K + V++T ++ + G L S++LF
Sbjct: 422 RLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVS 481
Query: 289 NMMPE-------------------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
N + + +D+V++ +I G+ E+ R F EM +RP
Sbjct: 482 NALTDMYSKCGCLNLAQNVFNISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRP 541
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ ++ V+SA A A + QG +IH +V+ + + + NSL+ LY++CG + A ++F
Sbjct: 542 DIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVF 601
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
I +++ S+N+MI G+ G + A+NLF MK++G+ + ++F++VLSAC+H GL+E
Sbjct: 602 YCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIE 661
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+G YFK M L NIEP HYACMVD+LGRAG + EA DLI ++ P +WGALLGA
Sbjct: 662 KGRKYFKMMCDL-NIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGA 720
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
R H N++L AA+HL EL+P Y++LS++Y+ + + N+VR K + +K+P
Sbjct: 721 CRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNP 780
Query: 570 GCSWIILKDKVHLFLAGRK 588
GCSW+ + D VH FL G K
Sbjct: 781 GCSWVQVGDLVHAFLVGEK 799
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 195/407 (47%), Gaps = 45/407 (11%)
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKNVVAWTAMVDGYMKV 146
A + + + V S++ Y G + +F ++ W ++
Sbjct: 57 HAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIA 116
Query: 147 DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
F DGF + +M R G+ + T + + C F R+G +VHG+ + GFD D+ +G
Sbjct: 117 GVF-DGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVG 175
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PG 262
N+++ YG G +A KVF M +RD VSWN++I +G EEA F M PG
Sbjct: 176 NTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPG 235
Query: 263 --KDFVSWTT------------------------------------MITGFSSKGNLEKS 284
D V+ + ++ + G+ + S
Sbjct: 236 IQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKAS 295
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
++F+ + E++ ++W AII+ F +Y +A F M+ + +RPN +T+SS+L
Sbjct: 296 KKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGEL 355
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
G ++H +KM +ESDV I NSL+ +Y+K G+ A IF + RNIVS+N+MI
Sbjct: 356 GLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMI 415
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ FA+N L EA+ L R+M+ +G PN +TF +VL AC +G + G
Sbjct: 416 ANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVG 462
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 202/418 (48%), Gaps = 44/418 (10%)
Query: 77 LISGYLKVGRCEEAARI-FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+ S +++V + E + F+ + DV +++ Y G +A ++FD+MPE++ V+
Sbjct: 146 VCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVS 205
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSM--RRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
W ++ +E+ F M + G+ + +T+ + C VH
Sbjct: 206 WNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCY 265
Query: 194 VSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ G + +GN+++ +YG+ G + KVF + +R+ +SWN++I+ + G+ +
Sbjct: 266 ALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMD 325
Query: 253 AYRLFERMPGK----DFVSWTTM---------------ITGFSSKGNLEKSI-------- 285
A +F M + + V+ ++M + GFS K +E +
Sbjct: 326 ALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLID 385
Query: 286 ------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+FN M ++ V+W A+I+ F N EA +M K PN +T
Sbjct: 386 MYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVT 445
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
++VL A A LN G +IHA ++++ D+ + N+L +YSKCG + A +F NI
Sbjct: 446 FTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVF-NIS 504
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
R+ VSYN +I G+++ E+L LF +M+ G+ P+ ++F+ V+SAC ++ + +G
Sbjct: 505 VRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQG 562
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 128/235 (54%), Gaps = 6/235 (2%)
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
D T++ + + G ++++F+ MPE+D V+W +I + YEEA +F M+
Sbjct: 171 DVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMV 230
Query: 324 --RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCG 380
+ ++P+ +T+ SVL A T +H + +K+ + V + N+LV +Y KCG
Sbjct: 231 AAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCG 290
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+ + ++F IDERN++S+N++I+ F+ G +AL++FR M DEG+ PN +T S+L
Sbjct: 291 SEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLP 350
Query: 441 ACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+GL + G ++ S+K IE ++D+ ++GS A + N M
Sbjct: 351 VLGELGLFKLGMEVHGFSLKM--AIESDVFISNSLIDMYAKSGSSRIASTIFNKM 403
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 155/371 (41%), Gaps = 82/371 (22%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATM---PMR-NAVSYAAMITGFVRRGMFYEAE 58
+R S+NA+IT+ + +A ++F M MR N+V+ ++M+ G+F
Sbjct: 304 ERNVISWNAIITSF-SFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGM 362
Query: 59 ELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
E++ + M A D SN+LI Y K G A+ IF M +++V+W +M+ + +
Sbjct: 363 EVHGFSLKM-AIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARN 421
Query: 116 GRVIEAREIFDKMPEK----NVVAWT---------------------------------- 137
EA E+ +M K N V +T
Sbjct: 422 RLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVS 481
Query: 138 -AMVDGYMKVDCFE------------------------------DGFDLFLSMRRGGMAF 166
A+ D Y K C + LF MR GM
Sbjct: 482 NALTDMYSKCGCLNLAQNVFNISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRP 541
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ ++ + AC R+G ++HGL+ R F + + NS++ +Y R G +D A KVF
Sbjct: 542 DIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVF 601
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLE 282
+ +D SWN++I GY GE++ A LFE M D VS+ +++ S G +E
Sbjct: 602 YCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIE 661
Query: 283 KSIELFNMMPE 293
K + F MM +
Sbjct: 662 KGRKYFKMMCD 672
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/655 (29%), Positives = 339/655 (51%), Gaps = 47/655 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+ +R S S +++ + + A ++F M + + MI GFV G+F++A +
Sbjct: 55 LVERNSVSLTRALSSYVERG-YMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDF 113
Query: 61 YVNMP--ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCK 114
Y M D+ +I + E R+ +++ D+ S++ Y K
Sbjct: 114 YHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAK 173
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + A +F +MP +++V+W +M+ GY+ V F M+ G+ + ++ +
Sbjct: 174 IGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGI 233
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
AC R G ++H + R + D+++ S++ MY + G MD A ++F ++ +
Sbjct: 234 LGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSI 293
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMP--GKDFVSWTTMIT------------------G 274
V+WN++I GY N + E++ +M GK W TMI G
Sbjct: 294 VAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHG 353
Query: 275 FSSK--------------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
F+ + G L+ + LF M E++ ++W A+I+ + N + +
Sbjct: 354 FAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRK 413
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F ++ K ++P+ T++S+L A A A+L + QIH +V K+ ++S+ + NS+V
Sbjct: 414 AMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVF 473
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y KCGN++ A IF + ++++S+N++I +A +G G ++ LF +M+++G PN T
Sbjct: 474 MYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGST 533
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F+S+L +C+ GLV EG+ YF SMK YNI PG EHY C++D++GR G+L A + I M
Sbjct: 534 FVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEM 593
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
P +WG+LL A R +++LA++AA+H++ LE D+ YV+LS++Y+ G+ D
Sbjct: 594 PLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVE 653
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
R++ K + + KS GCS + L K F+ +S ++ + L ISK E
Sbjct: 654 RIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGE 708
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 35/284 (12%)
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
S + +R++VS +S YV G ++ A LFE M D W MI
Sbjct: 53 SFLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIR------------- 99
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
GFV+N + +A ++ M VR + T V+ A
Sbjct: 100 ------------------GFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYD 141
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L +G ++H V+K ++ D+ I NSL+ +Y+K G + A +F + R++VS+NSMISG
Sbjct: 142 LAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISG 201
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIE 465
+ G G +L+ FR+M+ G+ ++ + + +L AC+ G + G I+ + M++ ++
Sbjct: 202 YVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELD 261
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+ +VD+ + G + A L + +T + W A++G
Sbjct: 262 VMVQ--TSLVDMYAKCGRMDYAERLFDQIT-DKSIVAWNAMIGG 302
>gi|347954462|gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
Length = 830
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 194/592 (32%), Positives = 326/592 (55%), Gaps = 21/592 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
+A ++F +P RN V++ A++ G+V+ GM EA L +M P+R S C +A
Sbjct: 226 DARKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSASA 285
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G + G+ A I + E D + S+++ YCK G + A IFD+M +K+VV W
Sbjct: 286 NMGGVAEGKQSHAIAILNGL-ELDNILGTSLLNFYCKVGLIEYAEMIFDRMFDKDVVTWN 344
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ GY++ ED + MR + ++ +TL+ L A R + G +V R
Sbjct: 345 LLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQCYCIRH 404
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
+ DI+L + + MY + G + +A KVF ++D + WN+L++ Y +G EA RLF
Sbjct: 405 SLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 258 -----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVN 308
E +P + ++W +I G + ++ E+F M + ++WT +++G V
Sbjct: 465 YEMQLESVP-PNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGISPNLISWTTMMNGMVQ 523
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVS 367
N EEA + +M +RPN +++ LSASA A+L+ G IH ++V+ + S VS
Sbjct: 524 NGCSEEAILFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNLQHSSSVS 583
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I+ SLV +Y+KCG++ A R+F + + YN+MIS +A G +EA+ L+R ++D G
Sbjct: 584 IETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAITLYRSLEDMG 643
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
P+ ITF S+LSACNHVG + + F M + + ++P EHY MVD+L AG A
Sbjct: 644 NKPDNITFTSLLSACNHVGDINQAIEIFTDMVSKHGVKPCLEHYGLMVDLLASAGETDRA 703
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ LI M ++P + +L+ + +L + ++HL+E EP+++ YV +S+ Y+V
Sbjct: 704 LKLIEEMPYKPDARMIQSLVASCNKQHKSELVEYFSRHLLESEPENSGNYVTISNAYAVE 763
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILK--DKVHLFLAGRKSCLDLKEIE 597
G + ++R K K + K+PGCSWI +K + VH+F+A K+ + EI+
Sbjct: 764 GSWDEVVKMRDMMKAKGLTKNPGCSWIQIKGEEGVHVFVANDKTHIRKDEIQ 815
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 251/529 (47%), Gaps = 64/529 (12%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+S SY +++L N I EA + M RN + I G + +G YE
Sbjct: 34 SSTSYFHRVSSLCKNG-EIKEALSLVTKMDFRN-LRIGPEIYGEILQGCVYE-------- 83
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
RD + + LK G E +V Y K + A+ +
Sbjct: 84 ----RDLCTGKQIHARILKNGDFYAGNEYIET----------KLVIFYAKCDALEIAQVL 129
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F K+ +NV +W A++ ++ E F+ M + ++ + + +ACG
Sbjct: 130 FSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWS 189
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R G VHG V + G + + + +S+ MYG+ G +D+A KVF + +R+ V+WN+L+ GY
Sbjct: 190 RFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALLVGY 249
Query: 245 VHNGEIEEAYRLFERM------PGK---------------------------------DF 265
V NG EEA RL M P + D
Sbjct: 250 VQNGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDN 309
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ T+++ + G +E + +F+ M +KD VTW +ISG+V E+A M +
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLE 369
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+++ + +TLS+++SA+A T L G ++ + ++ ++ESD+ + + + +Y+KCG++VDA
Sbjct: 370 NLKYDCVTLSTLMSAAARTKNLKFGKEVQCYCIRHSLESDIVLASITMDMYAKCGSIVDA 429
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F + E++++ +N++++ +A++GL EAL LF +M+ E + PN IT+ ++ +
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRN 489
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
G V E F M++ I P + M++ + + G EAI + M
Sbjct: 490 GEVNEAKEMFLQMQS-SGISPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/567 (25%), Positives = 255/567 (44%), Gaps = 93/567 (16%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALISGY 81
+F+ + +RN S+AA+I R G+ A +V M P + +VC +
Sbjct: 129 LFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQW 188
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+ GR + +A +E V S+ D Y K G + +AR++FD++PE+NVVAW A++
Sbjct: 189 SRFGRGVHG-YVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALLV 247
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY++ E+ L MR+ G+ + +T++ A EG Q H + G +
Sbjct: 248 GYVQNGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLEL 307
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D ILG S++ Y ++G ++ A +F M +D V+WN LISGYV G +E+A + + M
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMR 367
Query: 262 GK----DFVSWTTMITGFSSKGNLE-----------KSIE-------------------- 286
+ D V+ +T+++ + NL+ S+E
Sbjct: 368 LENLKYDCVTLSTLMSAAARTKNLKFGKEVQCYCIRHSLESDIVLASITMDMYAKCGSIV 427
Query: 287 ----LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+F+ EKD + W +++ + + EA R F EM + V PN +T + ++ +
Sbjct: 428 DAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLL 487
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+N+ ++ + +Q+S +S N++S+ +
Sbjct: 488 RNGEVNEAKEMF-----------LQMQSSGIS--------------------PNLISWTT 516
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLVEEGFIYFK- 456
M++G QNG EEA+ RKM+D GL PN + LSA H G G+I
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNL 576
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
+ +IE +VD+ + G + +A + S + P ++ A++ A + N+
Sbjct: 577 QHSSSVSIETS------LVDMYAKCGDINKAERVFGSKLYSELP-LYNAMISAYALYGNV 629
Query: 517 DLAKLAAQHLMEL--EPDSATPYVVLS 541
A + L ++ +PD+ T +LS
Sbjct: 630 KEAITLYRSLEDMGNKPDNITFTSLLS 656
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/566 (31%), Positives = 304/566 (53%), Gaps = 40/566 (7%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ +++ ++V Y K RV +AR++FD+MPEK+ + W M+ GY K + + + +F
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRD 210
Query: 159 M-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRL 216
+ ++ TL + A R G+Q+H L ++ G + +D +L I++Y +
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL-TGFISLYSKC 269
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM---------------- 260
G + A+ +F + D V++N++I GY NGE E + LF+ +
Sbjct: 270 GKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLV 329
Query: 261 PGKDFVSWTTMITGFSSKGN--------------------LEKSIELFNMMPEKDDVTWT 300
P + I G+S K N +E + +LF+ PEK +W
Sbjct: 330 PVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+ISG+ N E+A F EM + PN +T++ +LSA A L+ G +H V
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ ES + + +L+ +Y+KCG++ +A R+F + ++N V++N+MISG+ +G G+EAL +F
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIF 509
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M + G+ P +TFL VL AC+H GLV+EG F SM Y EP +HYAC+VDILGR
Sbjct: 510 SEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGR 569
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L A+ I +M +P P VW LLGA R H + +LA+ ++ L EL+PD+ +V+L
Sbjct: 570 AGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLL 629
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S+++S VR K +++ K+PG + I + + H+F +G +S +K I L
Sbjct: 630 SNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKL 689
Query: 601 QTISKGTKEFDW-PKHDWSLLGLERD 625
+ + +E + P+ + +L +E +
Sbjct: 690 EKLEGKMREAGYQPETELALHDVEEE 715
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 192/420 (45%), Gaps = 45/420 (10%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTIL 174
G + AR+IF + +V + ++ G+ + +F +R+ + NS T
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFA 125
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
A F R G +HG G D +++LG++I+ MY + +++A KVF M ++D
Sbjct: 126 ISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTT------------------------ 270
+ WN++ISGY N E+ ++F + + T
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 271 ------------MITGF----SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
++TGF S G ++ + LF D V + A+I G+ +N + E
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETEL 305
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
+ F E++ + TL S++ S + IH + +K N S S+ +L +
Sbjct: 306 SLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLI---YAIHGYSLKSNFLSHTSVSTALTT 362
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSK + A ++F E+++ S+N+MISG+ QNGL E+A++LFR+M++ PN +T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVT 422
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+LSAC +G + G + + + E ++ + + GS+AEA L + M
Sbjct: 423 ITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFM 481
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 174/412 (42%), Gaps = 50/412 (12%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+ +A ++F MP ++ + + MI+G+ + M+ E+ +++ ++ + + L+
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 83 KVGRCEE---AARIFEAMVEKDVVAWGSMVDG----YCKKGRVIEAREIFDKMPEKNVVA 135
V +E +I + + ++ G Y K G++ A +F + ++VA
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVA 289
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
+ AM+ GY E LF + G S TL L G +HG
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLI---YAIHGYSL 346
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ F + ++ T+Y +L ++ A K+F ++ SWN++ISGY NG E+A
Sbjct: 347 KSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 256 LFERMPGKDFV----------------------SW-----------------TTMITGFS 276
LF M +F W T +I ++
Sbjct: 407 LFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G++ ++ LF+ MP+K++VTW +ISG+ + +EA F EML + P +T
Sbjct: 467 KCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLC 526
Query: 337 VLSASAATATLNQGSQI-HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
VL A + + +G +I ++ + + E V +V + + G++ A +
Sbjct: 527 VLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQ 578
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 103/276 (37%), Gaps = 70/276 (25%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+ S + +T + + I A ++F P ++ S+ AMI+G+ + G+ +A L+ M
Sbjct: 352 SHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 65 P--------------------------ARWRDSVC-----------SNALISGYLKVGRC 87
+W + S ALI Y K G
Sbjct: 412 QNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
EA R+F+ M +K+ V W +M+ GY G EA IF +
Sbjct: 472 AEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSE-------------------- 511
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV-HGLVSRFGFDYDIILG 206
M G+A +T + AC +EG ++ + ++ R+GF+ +
Sbjct: 512 -----------MLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLI 241
++ + GR G + A + M + S W +L+
Sbjct: 561 ACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLL 596
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+ +++ +Q HA +V +D+S+ L S G + A IF ++ ++ +N +
Sbjct: 30 STSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 404 ISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACN 443
+ GF+ N +L +F + K L PN T+ +SA +
Sbjct: 90 MRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAAS 130
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 202/629 (32%), Positives = 332/629 (52%), Gaps = 55/629 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSV--------C 73
++ +A+ +F M RN S+ ++ G+ ++G F EA LY M W V C
Sbjct: 144 NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM--LWVGGVKPDVYTFPC 201
Query: 74 SNALISGYLKVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
G + R +E + E D+ +++ Y K G V AR +FD+MP ++
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+++W AM+ GY + +G +LF +MR + + +TLT + AC R G +H
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V GF DI + NS+ MY G EA K+FS M ++D VSW ++ISGY +N ++
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 253 A---YRLFERMPGK-DFVSWTTMITGFSSKGNLEKSIEL--------------------- 287
A YR+ ++ K D ++ +++ ++ G+L+ +EL
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 288 --------------FNMMPEKDDVTWTAIISGF-VNNEQYEEAFRWFIEMLRKDVRPNQL 332
F+ +P K+ ++WT+II+G +NN +E F+ ++ ++PN +
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI--FLRQMKMTLQPNAI 499
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
TL++ L+A A L G +IHAHV++ + D + N+L+ +Y +CG + A+ F N
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NS 558
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
++++ S+N +++G+++ G G + LF +M + P++ITF+S+L C+ +V +G
Sbjct: 559 QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
+YF M+ Y + P +HYAC+VD+LGRAG L EA I M P P VWGALL A R
Sbjct: 619 MYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H +DL +L+AQH+ EL+ S Y++L +LY+ GK R+ +VR K + GCS
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
W+ +K KVH FL+ K KEI L+
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 187/360 (51%), Gaps = 41/360 (11%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSIT 170
+ + G +++A +F KM E+N+ +W +V GY K F++ L+ M GG+ + T
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ CG G +VH V R+G++ DI + N++ITMY + G + A +F M
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMI-------------- 272
+RD +SWN++ISGY NG E LF M G D ++ T++I
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 273 -------TGFS--------------SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
TGF+ + G+ ++ +LF+ M KD V+WT +ISG+ N
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
++A + M + V+P+++T+++VLSA A L+ G ++H +K + S V + N+
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
L+++YSKC + A IF NI +N++S+ S+I+G N EAL R+MK L PN
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQPN 497
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 162/343 (47%), Gaps = 40/343 (11%)
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
E+ L SM+ +A + L C EG +V+ + + LGN+
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------- 260
+ M+ R G + +A VF MS+R+ SWN L+ GY G +EA L+ RM
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 261 -------------------PGK-------------DFVSWTTMITGFSSKGNLEKSIELF 288
GK D +IT + G+++ + LF
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ MP +D ++W A+ISG+ N E F M V P+ +TL+SV+SA
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G IHA+V+ D+S+ NSL +Y G+ +A ++F+ ++ ++IVS+ +MISG+
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
N L ++A++ +R M + + P++IT +VLSAC +G ++ G
Sbjct: 375 YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 273/468 (58%), Gaps = 17/468 (3%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F+ + + V W + GY + LF+ M+R + T L +AC +
Sbjct: 79 VFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCG 138
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+EGV HG R G D+ + S+I +YG+ G + A KVF M +R+ VSW ++I+G
Sbjct: 139 VKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAG 198
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
Y ++ EA +LF+ MP K+ VSW +I+G+ G+L + ++F+ MP ++ V++T +I
Sbjct: 199 YASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMI 258
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDV----------------RPNQLTLSSVLSASAATATL 347
G+ + A F E +DV +P++ + S++SA + +L
Sbjct: 259 DGYAKSGDMASARFVFEEAPERDVVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSL 318
Query: 348 NQGSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
+ +V K +++ + +L+ + +KCG++ A ++F + +R+++SY SM+ G
Sbjct: 319 ELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQG 378
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+ +G G +A++LF +M +EGL P+ + F +L+AC+ GLV+EG YF+SMKT Y+I P
Sbjct: 379 LSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVP 438
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL 526
P+HYACMVD+LGRAG L EA +L+ SM EP G WGALLGA + H +++L ++ A L
Sbjct: 439 SPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQL 498
Query: 527 MELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
ELEP +A YV+LS++Y+ + D + +R K + + IRK PGCSWI
Sbjct: 499 FELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 546
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 145/288 (50%), Gaps = 25/288 (8%)
Query: 12 MITALIN--NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
++T+LI+ C I A ++F M RN VS+ AMI G+ EA +L+ MP
Sbjct: 160 VMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPE-- 217
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
+++V NA+ISGY+K G A ++F+ M ++VV++ +M+DGY K G + AR +F++
Sbjct: 218 KNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEA 277
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
PE++VVAW+A++ F + + + L AC +
Sbjct: 278 PERDVVAWSALI---------------FRVCAEWNVKPDEFIMVSLMSACSQMGSLELAK 322
Query: 189 QVHGLVSRFGFD-YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
V V + D + + ++I M + G MD A K+F M KRD +S+ S++ G +
Sbjct: 323 WVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIH 382
Query: 248 GEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
G +A LF RM + D V++T ++T S G +++ F M
Sbjct: 383 GCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESM 430
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+LI Y K G A ++F+ M E++VV+W +M+ GY ++EAR++FD+MPEKN V
Sbjct: 162 TSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAV 221
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE--------ACGRFF---- 182
+W A++ GY+K +F M N ++ T + + A RF
Sbjct: 222 SWNAIISGYVKCGDLRSARKMFDEMPHR----NVVSFTTMIDGYAKSGDMASARFVFEEA 277
Query: 183 RYREGVQVHGLVSRFGFDYDI----ILGNSIITMYGRLGFMDEANKVFSMMSKRD----- 233
R+ V L+ R ++++ + S+++ ++G ++ A V + K
Sbjct: 278 PERDVVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHR 337
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
A +LI G ++ A +LFE MP +D +S+ +M+ G S G +++ LF+ M
Sbjct: 338 AHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLN 397
Query: 294 K----DDVTWTAIISGFVNNEQYEEAFRWFIEM 322
+ DDV +T I++ +E +F M
Sbjct: 398 EGLTPDDVAFTVILTACSRAGLVDEGCYYFESM 430
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 23/279 (8%)
Query: 236 SWNSLISGYVHNGEIEEAY-RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
S ++L+ +E+ + R+ + +D + +T +S N + +FN +
Sbjct: 27 SISTLLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLTLCNSLSNFSYTTSVFNGVSSP 86
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
V W I G+ N FI M R D P++ T S++ A + + +G H
Sbjct: 87 STVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFH 146
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
V+ + DV + SL+ LY KCG ++ A ++F + ERN+VS+ +MI+G+A
Sbjct: 147 GSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLV 206
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE--HYA 472
EA LF +M ++ N +++ +++S G V+ G + +S + +++ P +
Sbjct: 207 EARKLFDEMPEK----NAVSWNAIIS-----GYVKCGDL--RSARKMFDEMPHRNVVSFT 255
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPG----VWGALL 507
M+D ++G +A A FE P W AL+
Sbjct: 256 TMIDGYAKSGDMASA-----RFVFEEAPERDVVAWSALI 289
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 137/326 (42%), Gaps = 71/326 (21%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+ AMI + + + EA ++F MP +NAVS+ A+I+G+V+ G A ++
Sbjct: 184 MGERNVVSWTAMIAGYASFS-DLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKM 242
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM------------ 108
+ MP R+ V +I GY K G A +FE E+DVVAW ++
Sbjct: 243 FDEMPH--RNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALIFRVCAEWNVKP 300
Query: 109 -----------------------VDGYCKK---------------------GRVIEAREI 124
VD Y +K G + A ++
Sbjct: 301 DEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKL 360
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F++MP+++++++ +M+ G C LF M G+ + + T++ AC R
Sbjct: 361 FEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLV 420
Query: 185 REGVQVHGLVSRFGFDYDIILG----NSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNS 239
EG DY I+ ++ + GR G + EA ++ SM + A +W +
Sbjct: 421 DEGCY---YFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGA 477
Query: 240 LISGYVHNGEIE----EAYRLFERMP 261
L+ + +IE A +LFE P
Sbjct: 478 LLGACKLHCDIELGEVVADQLFELEP 503
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 142/362 (39%), Gaps = 96/362 (26%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
QVH + R G D L + +T+ L VF+ +S V WN+ I GY N
Sbjct: 43 QVHARIIRKGLHQDHFLISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENY 102
Query: 249 EIEEAYRLFERMP---------------------------------------GKDFVSWT 269
+ LF RM G D T
Sbjct: 103 SVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMT 162
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
++I + G + + ++F+ M E++ V+WTA+I+G+ + EA + F EM K+
Sbjct: 163 SLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNA-- 220
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
VS N+++S Y KCG++ A ++F
Sbjct: 221 ------------------------------------VS-WNAIISGYVKCGDLRSARKMF 243
Query: 390 TNIDERNIVSYNSMISGFAQNG-------LGEEALN---------LFRKMKDEGLVPNQI 433
+ RN+VS+ +MI G+A++G + EEA +FR + + P++
Sbjct: 244 DEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALIFRVCAEWNVKPDEF 303
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY-ACMVDILGRAGSLAEAIDLIN 492
+S++SAC+ +G +E + +I+ H A ++D+ + GS+ A L
Sbjct: 304 IMVSLMSACSQMGSLELA-KWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFE 362
Query: 493 SM 494
M
Sbjct: 363 EM 364
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/603 (32%), Positives = 323/603 (53%), Gaps = 51/603 (8%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGF--VRRGMFYEAEELYVNMPARWRDSVCSNALISG 80
++ A IF + N + MI G+ R+ +F A +V M + R + S + +
Sbjct: 207 LHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIF--AFSFFVYM-FQLRVEMDSRSFV-- 261
Query: 81 YLKVGRCEEAARIFEAM----------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
+ C++ +FE + +++ ++ Y ++G + AR++FD+ +
Sbjct: 262 -FALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSD 320
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K+VV WT M+DGY DC E+ ++F M + N +TL + AC G +V
Sbjct: 321 KDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRV 380
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H V + L N+++ MY V + L+
Sbjct: 381 HEKVEEKNMRCSLSLHNALLDMY---------------------VKCDCLV--------- 410
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+A LF+RM KD SWT+M+ G++ G+LE + F+ P K+ V W+A+I+G+ N
Sbjct: 411 -DARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNN 469
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH-VVKMNMESDVSIQ 369
+ +E+ + F EM+ + V P + TL SVLSA LN G IH + VV + V+++
Sbjct: 470 KPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLE 529
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N++V +Y+KCG++ A +F+ + ERN++S+N+MI+G+A NG ++A+N+F +M++ G
Sbjct: 530 NAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFE 589
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
PN ITF+S+L+AC+H GL+ EG YF +M+ Y I+P HYACMVD+LGR G L EA
Sbjct: 590 PNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYK 649
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
LI +M +P WGALL A R H N++LA+L+A +L+ L+P+ + YV+L++ + K
Sbjct: 650 LIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRK 709
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
D RVR K K ++K PG S I + FL +S +EI L+ + +K+
Sbjct: 710 WSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEI-YKLECDNLSSKK 768
Query: 610 FDW 612
W
Sbjct: 769 LTW 771
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 117/229 (51%), Gaps = 1/229 (0%)
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
VS + G+L + +FN + + + W +I G+ N + AF +F+ M +
Sbjct: 192 VSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQL 251
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
V + + L A T+ +G ++ V KM + ++ ++N L+ Y++ G + +A
Sbjct: 252 RVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNA 311
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F ++++V++ +MI G+A + EEA+ +F M + PN++T ++V+SAC+ +
Sbjct: 312 RQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDM 371
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
G +E G + ++ N+ + ++D+ + L +A +L + M
Sbjct: 372 GNLEMGKRVHEKVEE-KNMRCSLSLHNALLDMYVKCDCLVDARELFDRM 419
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 42/147 (28%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
SI A E+F+TMP RN +S+ M I+GY
Sbjct: 541 SIDAATEVFSTMPERNLISWNTM---------------------------------IAGY 567
Query: 82 LKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA-- 135
GR ++A +F+ M E + + + S++ G + E RE FD M K +
Sbjct: 568 AANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPE 627
Query: 136 ---WTAMVDGYMKVDCFEDGFDLFLSM 159
+ MVD + E+ + L +M
Sbjct: 628 RGHYACMVDLLGRTGLLEEAYKLIANM 654
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/601 (31%), Positives = 330/601 (54%), Gaps = 44/601 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS----------VCSN 75
A ++F M + + +I G+ G+F EA + Y M S C
Sbjct: 77 ALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGE 136
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
L L VG+ + ++ + + DV ++D Y K G + A ++FD+MP +++V+
Sbjct: 137 LLA---LMVGQ-KVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVS 192
Query: 136 WTAMVDGYMKVDCFEDGFD---LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
W +MV GY ++D DG F M R G + + AC R G+++H
Sbjct: 193 WNSMVSGY-QID--GDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHC 249
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE-IE 251
V R + DI++ S+I MYG+ G +D A +VF+ + ++ V+WN++I G + + I
Sbjct: 250 QVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIP 309
Query: 252 EAYRLFERMPG-------------------KDFVSW----TTMITGFSSKGNLEKSIELF 288
+ + +P K F+ + T ++ + G L+ + +F
Sbjct: 310 DVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVF 369
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
N M EK+ V+W +++ +V NEQY+EA + F +L + ++P+ +T++SVL A A A+ +
Sbjct: 370 NQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRS 429
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+G QIH++++K+ + S+ I N++V +Y+KCG++ A F + +++VS+N+MI +A
Sbjct: 430 EGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYA 489
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
+G G ++ F +M+ +G PN TF+S+L+AC+ GL++EG+ +F SMK Y I+PG
Sbjct: 490 IHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGI 549
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
EHY CM+D+LGR G+L EA I M P +WG+LL A R H ++ LA+LAA+H++
Sbjct: 550 EHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILS 609
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
L+ D+ YV+LS++Y+ G+ D +R++ K + + K+ GCS + + + F+ +
Sbjct: 610 LKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDR 669
Query: 589 S 589
S
Sbjct: 670 S 670
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 183/380 (48%), Gaps = 54/380 (14%)
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
G+ + G + A ++F+KM + W ++ GY F++ D + M G+ ++ T
Sbjct: 67 GFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFT 126
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ +ACG G +VHG + + GFD D+ + N +I MY ++GF++ A KVF M
Sbjct: 127 FPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMP 186
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFE---RMPGK------------------------ 263
RD VSWNS++SGY +G+ + F+ R+ K
Sbjct: 187 VRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGME 246
Query: 264 ------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
D + T++I + G ++ + +FN + K+ V W A+I G +++
Sbjct: 247 IHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDK 306
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
V P+ +T+ ++L + + + L +G IH ++ + ++ +
Sbjct: 307 ---------------VIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETA 351
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
LV +Y KCG + A +F ++E+N+VS+N+M++ + QN +EAL +F+ + +E L P+
Sbjct: 352 LVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPD 411
Query: 432 QITFLSVLSACNHVGLVEEG 451
IT SVL A + EG
Sbjct: 412 AITIASVLPAVAELASRSEG 431
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 127/254 (50%), Gaps = 4/254 (1%)
Query: 257 FERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
F+ + + ++ T + GF G + ++++F M D W II G+ NN ++EA
Sbjct: 50 FKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAI 109
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
++ M + +R + T V+ A L G ++H ++K+ + DV + N L+ +Y
Sbjct: 110 DFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMY 169
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
K G + A ++F + R++VS+NSM+SG+ +G G +L F++M G ++ +
Sbjct: 170 LKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMI 229
Query: 437 SVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
S L AC+ + G I+ + +++ ++ + ++D+ G+ G + A + N +
Sbjct: 230 SALGACSIEHCLRSGMEIHCQVIRSELELDIMVQ--TSLIDMYGKCGKVDYAERVFNRI- 286
Query: 496 FEPPPGVWGALLGA 509
+ W A++G
Sbjct: 287 YSKNIVAWNAMIGG 300
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 330/648 (50%), Gaps = 51/648 (7%)
Query: 7 ASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-- 64
A N + L+ N + +A ++F +P R+ VS+ +I+G+V EA L+ M
Sbjct: 50 AEANNQLKILVKTN-HLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRL 108
Query: 65 -------PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
P + + L YL G + +V V +++D Y K G
Sbjct: 109 QSELRIDPFLLSLGLKTCGLGLNYL-YGTNLHGFSVKTGLV-NSVFVGSALLDMYMKIGE 166
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ + ++FD+MP +N V WTA++ G ++ E G F M R + ++S I +A
Sbjct: 167 IGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKA 226
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
G +H + GFD + + NS+ TMY + G +D F M D VSW
Sbjct: 227 SADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSW 286
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFV-------------------SW---------- 268
++++ Y+ G+ + + F+RM + + W
Sbjct: 287 TTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLC 346
Query: 269 ----------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+++T +S G L ++F M +D +TW+ II+ + EEAF +
Sbjct: 347 VGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEY 406
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
M + +PN+ L+SVLS + A L QG Q+HAHV+ + +E + ++L+ +Y+K
Sbjct: 407 LSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAK 466
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG++ +A +IF + + +I+S+ +MISG+A++G +EA+ LF ++ GL P+ +TF+ V
Sbjct: 467 CGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGV 526
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
L+AC+H G+V+ GF YF SM Y+I P EHY CM+D+L RAG L +A LI SM +
Sbjct: 527 LTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQW 586
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
VW LL A R H ++D + AA +++L+P+ A ++ L+++++ GK ++ +RM
Sbjct: 587 DDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRM 646
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKG 606
K K + K PG S + +KD V F++G +S ++I L+ ++ G
Sbjct: 647 LMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASG 694
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 42/291 (14%)
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
L + F D+ N+ + + + + +A +F + +RD VSW ++ISGYV++ + E
Sbjct: 39 LNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSE 98
Query: 253 AYRLFERMP---------------------GKDFVSWTTMITGFSSK------------- 278
A RLF +M G +++ + T + GFS K
Sbjct: 99 ALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYL-YGTNLHGFSVKTGLVNSVFVGSAL 157
Query: 279 -------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
G + +S ++F+ MP ++ VTWTA+I+G V E +F M R V +
Sbjct: 158 LDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDS 217
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ L ASA + LN G IH +K + + + NSL ++Y+KCG + F
Sbjct: 218 YAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRK 277
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ ++VS+ ++++ + Q G + L F++M+ ++PN+ TF +V+S C
Sbjct: 278 MRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCC 328
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/634 (30%), Positives = 320/634 (50%), Gaps = 50/634 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW---RDSVCSNALIS 79
+ +A ++F MP +N V++ ++++G+ R G A ++ +M D C+ AL++
Sbjct: 64 LADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVA 123
Query: 80 ----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G L+ G + + A D +++ Y + G + A+E+FD+M +VV
Sbjct: 124 CADLGALRAGE-QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVG 182
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LV 194
+T+++ + + FE + + M + G+ N T+T + AC R G Q+HG L+
Sbjct: 183 YTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLI 238
Query: 195 SRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G + ++I Y R G A VF + ++ VSW S++ Y+ +G +EEA
Sbjct: 239 KKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEA 298
Query: 254 YRLFERM------PGK------------------------------DFVSWTTMITGFSS 277
++F M P + D +++ +
Sbjct: 299 LQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGR 358
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
G +E+ + N + D V+WT IS N E+A +M + PN SSV
Sbjct: 359 TGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSV 418
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
LS+ A A+L+QG Q H +K+ +S++ N+L+++YSKCG + A F + ++
Sbjct: 419 LSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDV 478
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
S+NS+I G AQ+G +AL +F KM+ G+ P+ TFL VL CNH G+VEEG ++F+
Sbjct: 479 TSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRL 538
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
M Y+ P P HYACM+D+LGR G EA+ +IN M FEP +W LL + + H NLD
Sbjct: 539 MIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLD 598
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
+ KLAA LMEL + YV++S++Y++ G+ D +VR + ++K GCSWI +
Sbjct: 599 IGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEIN 658
Query: 578 DKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD 611
++VH F + S + I L + ++FD
Sbjct: 659 NEVHTFASRDMSHPNSDSIYQMLGELVAVMQDFD 692
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 201/430 (46%), Gaps = 50/430 (11%)
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
++P+R R VC G C AA DVV ++ K GR+ +A
Sbjct: 18 CHVPSRRRRRVCD----------GLCSAAAADNGCAESPDVVLECKRLNRLVKSGRLADA 67
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
++FD+MP KNVVAWT+++ GY + E +F M G+A N AC
Sbjct: 68 LDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADL 127
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
R G QVH L R GF D +G+ +I MY R G + A +VF M D V + SLI
Sbjct: 128 GALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLI 187
Query: 242 SGYVHNGEIEEAYRLFERM-------------------------------------PGKD 264
S + NGE E A +M +
Sbjct: 188 SAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQS 247
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
S T +I +S G + + +F+ + K+ V+W +++ ++ + + EEA + F +M+
Sbjct: 248 VYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMIS 307
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ V PN+ LS VL A ++ G Q+H +K ++ +D+ + N+L+S+Y + G V +
Sbjct: 308 EGVDPNEFALSIVL---GACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEE 364
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
+ I+ ++VS+ + IS QNG GE+A+ L +M EG PN F SVLS+C
Sbjct: 365 LEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCAD 424
Query: 445 VGLVEEGFIY 454
V +++G +
Sbjct: 425 VASLDQGMQF 434
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 186/412 (45%), Gaps = 27/412 (6%)
Query: 4 RTSASYNAMITALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
R+ + Y++ TALI+ N A +F ++ +N VS+ +M+ ++R G EA ++
Sbjct: 244 RSQSVYSS--TALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQV 301
Query: 61 YVNM------PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+ +M P + S+ A G + +GR + I ++ D+ +++ Y +
Sbjct: 302 FGDMISEGVDPNEFALSIVLGA--CGSIGLGRQLHCSAIKHDLI-TDIRVSNALLSMYGR 358
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G V E + +K+ ++V+WT + + E L M G N + +
Sbjct: 359 TGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSV 418
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
+C +G+Q H L + G D +I GN++I MY + G M A F +M D
Sbjct: 419 LSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDV 478
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNM 290
SWNSLI G+ +G+ +A +F +M D ++ ++ G + G +E+ F +
Sbjct: 479 TSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRL 538
Query: 291 MPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
M ++ T + +I N +++EA R +M P+ L ++L++
Sbjct: 539 MIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKLHR 595
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L+ G +++++ + D + + ++Y+ G DA ++ +DE +
Sbjct: 596 NLDIGKLAADRLMELS-DRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGV 646
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 186/475 (39%), Gaps = 101/475 (21%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------S 71
S+ A E+F M + V Y ++I+ F R G F A E + M + +
Sbjct: 164 SLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILT 223
Query: 72 VCSNAL---ISGYL--KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
C L I GYL K+G + + V + +++D Y + G A+ +FD
Sbjct: 224 ACPRVLGQQIHGYLIKKIG-----------LRSQSVYSSTALIDFYSRNGEFKLAKAVFD 272
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+ KNVV+W +M+ Y++ E+ +F M G+ N L+I+ ACG
Sbjct: 273 SLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL--- 329
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G Q+H + DI + N++++MYGR G ++E + + + D VSW + IS
Sbjct: 330 GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQ 389
Query: 247 NGEIEEAYRLFERMPGKDF---------------------------------------VS 267
NG E+A L +M + F +
Sbjct: 390 NGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICT 449
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+I +S G + + F++M D +W ++I G + +A F +M +
Sbjct: 450 GNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGI 509
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ T VL + + +G L+ + ++D Y
Sbjct: 510 KPDDSTFLGVLMGCNHSGMVEEG-----------------------ELFFRL--MIDQYS 544
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
FT Y MI +NG +EAL + M E P+ + + ++L++C
Sbjct: 545 -FTPAPSH----YACMIDMLGRNGRFDEALRMINDMPFE---PDALIWKTLLASC 591
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
DV ++ ++ K G + DA +F + +N+V++ S++SG+ +NG E AL +F M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
+ G+ PN + L AC +G + G S+ +C++++ R GSL
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGE-QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 485 AEAIDLINSMTFEPPPGVWG--ALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVL 540
A ++ + M P V G +L+ A + +LA A +++ L+P+ T +L
Sbjct: 166 PAAKEVFDRMD---SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTIL 222
Query: 541 SDLYSVIGKKRDGNRVR 557
+ V+G++ G ++
Sbjct: 223 TACPRVLGQQIHGYLIK 239
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/539 (30%), Positives = 300/539 (55%), Gaps = 30/539 (5%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN+LI Y+++G +A R F+ + KD VAW ++ G K G + + + + + P ++V
Sbjct: 145 SNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDV 204
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++WT+++ Y + + + F +M G+A + +T+ + AC + G +H L
Sbjct: 205 ISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLL 264
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V G L ++I MY + G A +VF + +
Sbjct: 265 VEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGR---------------------- 302
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
G SW +I G+ G+++ + LF+ M +D +T+ ++++G++++ Q
Sbjct: 303 --------GPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLR 354
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EA F+ M R D+R + T+ ++L+A A+ L QG +HA + + +E+D+ + +L+
Sbjct: 355 EALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALL 414
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y KCG V +A +F + +R++ ++ +MI+G A NG+G+ AL F +M+ +G PN +
Sbjct: 415 DMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSV 474
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
++++VL+AC+H L+ EG +YF M+ LYNI P EHY CM+D+LGR+G L EA+DL+ +
Sbjct: 475 SYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKT 534
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
M +P +W ++L A R H ++DLA+ AA+HL++LEPD YV L ++Y + +
Sbjct: 535 MPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENA 594
Query: 554 NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+++RM + ++++K+ G S I + +VH F+ KS + EI L+ IS K +
Sbjct: 595 SKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGY 653
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 155/367 (42%), Gaps = 67/367 (18%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +FD+MP + TA+ F LF MRR G+ + T LF+
Sbjct: 56 ALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSS 115
Query: 181 FFRYRE---GVQVHGLVSRFGFDYDI-ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
R +H R + NS+I MY RLG +A + F + +DAV+
Sbjct: 116 SSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVA 175
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
W LISG G + + L + P +D +SWT++I +S
Sbjct: 176 WTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRAN----------------- 218
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+ EA F ML + P+++T+ +VLSA A L G +H
Sbjct: 219 --------------RAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLL 264
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGN----------------------VVDAY-------- 386
V + M + ++ +L+ +Y+KCG+ ++D Y
Sbjct: 265 VEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDV 324
Query: 387 --RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
+F ++ R+I+++NSM++G+ +G EAL LF M+ L + T +++L+AC
Sbjct: 325 ARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACAS 384
Query: 445 VGLVEEG 451
+G +++G
Sbjct: 385 LGALQQG 391
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 149/400 (37%), Gaps = 130/400 (32%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+NA+I + + A +F M +R+ +++ +M+TG++ G EA L+++M R
Sbjct: 308 SWNAIIDGYCKHG-HVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSM--R 364
Query: 68 WRD------------SVCSN---------------------------ALISGYLKVGRCE 88
D + C++ AL+ Y+K GR +
Sbjct: 365 RHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVD 424
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
EA +F+ M ++DV W +M+ G +A+ M
Sbjct: 425 EATIVFQRMGKRDVHTWTAMIAG----------------------LAFNGMGKA------ 456
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN- 207
+ F MR G NS++ + AC EG R FD IL N
Sbjct: 457 ---ALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEG--------RLYFDEMRILYNI 505
Query: 208 --------SIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+I + GR G +DEA + V +M + +AV W S++S + I+ A E
Sbjct: 506 HPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAE 565
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
L + P++D V + + + ++++ Q+E A +
Sbjct: 566 ---------------------------HLLKLEPDEDGV-YVQLYNIYIDSRQWENASKI 597
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
+ M + V+ +A +++ Q+H VV
Sbjct: 598 RMLMEERQVK-----------KTAGYSSITVAGQVHKFVV 626
>gi|302780000|ref|XP_002971775.1| hypothetical protein SELMODRAFT_60139 [Selaginella moellendorffii]
gi|300160907|gb|EFJ27524.1| hypothetical protein SELMODRAFT_60139 [Selaginella moellendorffii]
Length = 516
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 301/559 (53%), Gaps = 48/559 (8%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+N +ITA I NN ++ E+ +F MP R+ +++ ++++ + +RG EA +L+ MP R
Sbjct: 1 SWNIIITACIQNN-AVGESKGLFDRMPERDTITWNSLLSAYAQRGHLEEANDLFYMMPER 59
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
D + N LI + A I+ M E V+W M+ Y G + + R +FD
Sbjct: 60 --DYMSWNTLIQASAS-SNLDLAQEIYHYMPEHSHVSWSVMLTAYANFGHLDKTRSLFDS 116
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGF-DLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
MPE+N+++WTAM GY + ++ + ++F +M
Sbjct: 117 MPERNLISWTAMAAGYAQNGYLQESYSEIFSTMP-------------------------- 150
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI-SGYV 245
+ D+ ++IT+YG +A + F +M ++ VSW+++ + Y
Sbjct: 151 -------------ERDVFSWTAMITVYGEFDDPHKARRCFDLMPHKNVVSWSAMFQAAYA 197
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
HNG +E A FERMP +D VSW ++I FS KG LE++ +LF++MPE + W +I
Sbjct: 198 HNGHLESAKIAFERMPSRDVVSWNSIIAFFSQKGKLEEAKDLFHLMPEPNTAAWNVMIQA 257
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+ + A F M V P+ +T ++ A + A +GS A +V + D
Sbjct: 258 HAQSGHLDLAMDVFRLMDLHGVSPDSVTYIAIFDACSRIANAEEGSAFIASIVHPGILQD 317
Query: 366 -VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
V++ N+ +++Y + G A+ +F + R+ VS+N+M++ FA+NG GE AL++F M+
Sbjct: 318 SVAVGNAALTMYGRSGLAAGAWSVFQQMPVRDSVSWNAMLTAFARNGHGEAALDVFLAME 377
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
EGLVP+ ITF++VLSAC+H GL+ YF S+ Y + P +HY C+ D+L R+G L
Sbjct: 378 LEGLVPDIITFVNVLSACSHAGLLHRARGYFHSISCDYGLTPIYDHYVCLTDLLARSGRL 437
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA +L+NSM FEP W ALLGA R+H ++ AA ++ D+ +PYV+LS LY
Sbjct: 438 VEAEELVNSMPFEPNYEAWMALLGACRSHGDVRRGNRAAGFFVQAGVDAESPYVLLSHLY 497
Query: 545 SVIGKKRDGNRVR--MKKK 561
+ G K D +R M++K
Sbjct: 498 AEAGSKDDVLVIRKAMRRK 516
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 8/295 (2%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+ AM N EIF+TMP R+ S+ AMIT + ++A
Sbjct: 117 MPERNLISWTAMAAGYAQNGYLQESYSEIFSTMPERDVFSWTAMITVYGEFDDPHKARRC 176
Query: 61 YVNMPARWRDSVCSNALI-SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
+ MP ++ V +A+ + Y G E A FE M +DVV+W S++ + +KG++
Sbjct: 177 FDLMPH--KNVVSWSAMFQAAYAHNGHLESAKIAFERMPSRDVVSWNSIIAFFSQKGKLE 234
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EA+++F MPE N AW M+ + + + D+F M G++ +S+T +F+AC
Sbjct: 235 EAKDLFHLMPEPNTAAWNVMIQAHAQSGHLDLAMDVFRLMDLHGVSPDSVTYIAIFDACS 294
Query: 180 RFFRYREGVQVHGLVSRFGFDYD-IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
R EG + G D + +GN+ +TMYGR G A VF M RD+VSWN
Sbjct: 295 RIANAEEGSAFIASIVHPGILQDSVAVGNAALTMYGRSGLAAGAWSVFQQMPVRDSVSWN 354
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFN 289
++++ + NG E A +F M + D +++ +++ S G L ++ F+
Sbjct: 355 AMLTAFARNGHGEAALDVFLAMELEGLVPDIITFVNVLSACSHAGLLHRARGYFH 409
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 125/299 (41%), Gaps = 48/299 (16%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + S++AM A +N + A F MP R+ VS+ ++I F ++G EA++L
Sbjct: 180 MPHKNVVSWSAMFQAAYAHNGHLESAKIAFERMPSRDVVSWNSIIAFFSQKGKLEEAKDL 239
Query: 61 YVNMP----ARWR-----------------------------DSVCSNALISGYLKVGRC 87
+ MP A W DSV A+ ++
Sbjct: 240 FHLMPEPNTAAWNVMIQAHAQSGHLDLAMDVFRLMDLHGVSPDSVTYIAIFDACSRIANA 299
Query: 88 EEAARIFEAMVE----KDVVAWG-SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
EE + ++V +D VA G + + Y + G A +F +MP ++ V+W AM+
Sbjct: 300 EEGSAFIASIVHPGILQDSVAVGNAALTMYGRSGLAAGAWSVFQQMPVRDSVSWNAMLTA 359
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF-FRYREGVQVHGLVSRFG--- 198
+ + E D+FL+M G+ + IT + AC +R H + +G
Sbjct: 360 FARNGHGEAALDVFLAMELEGLVPDIITFVNVLSACSHAGLLHRARGYFHSISCDYGLTP 419
Query: 199 -FDYDIILGNSIITMYGRLGFMDEANK-VFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+D+ + L + + R G + EA + V SM + + +W +L+ +G++ R
Sbjct: 420 IYDHYVCLTD----LLARSGRLVEAEELVNSMPFEPNYEAWMALLGACRSHGDVRRGNR 474
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 295/542 (54%), Gaps = 13/542 (2%)
Query: 74 SNALISGYLKVGRCEEAARIFEA--MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM--- 128
+ AL++G + AAR +A +V + + V AR +FD
Sbjct: 12 AGALLAGLARRATSPAAARQLQAQLLVRGLPLPARAAVALIASSHSPRHARAVFDSAVPA 71
Query: 129 PEKNVVAWTAMVDGYMK-----VDCFEDGFDLF-LSMRRGGMAFNSITLTILFEACGRFF 182
+NV WTA + Y + + E LF L +RRG N+ T + + C
Sbjct: 72 ASENVYLWTATIAAYARHASSSLSAAEGALALFRLMLRRGVPRPNAFTASSVVRCCSALR 131
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
REG+QVHG + G +G +++ MYG LG + +A +VF M + V N++++
Sbjct: 132 AVREGIQVHGFLFSAGLGRASHVGAALVDMYGSLGRVADARRVFDEMPSTNVVLGNTMVA 191
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
YV G++E +F+RM +D +SW T++ G+ +G + +LF MP+++ +W +
Sbjct: 192 CYVRAGDVEAGRDVFDRMAERDPISWNTLMMGYLRQGEAGVARDLFEEMPDRNVNSWNMV 251
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
I+ + +A F M +P+ T++ ++SA A +L+ SQ+H + K +
Sbjct: 252 IAACSQEGLWADAVEVFNRMRLARFQPDPATMAVLMSACAQLGSLSIASQVHGILRKGCV 311
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
E + + NSL+ +Y+KCG+V A+ +F ++ VSYN MI AQ+G G +AL +F +
Sbjct: 312 EMNFHVLNSLIDMYAKCGSVSQAHLLFVETRLKDTVSYNVMICALAQHGHGRDALQIFDE 371
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
M +EGL P+ +TFL VLSAC H GLV +G YF+SM+T Y IE P+HYACMVD+ GRAG
Sbjct: 372 MSEEGLQPDAVTFLGVLSACAHAGLVHDGKFYFESMRTNYAIEQSPDHYACMVDLYGRAG 431
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
+ EA L +M +P GVWGAL+ A R H N+++ K+AA+ L+ +EP + YV+L++
Sbjct: 432 LIEEAYQLARAMPVKPHAGVWGALINACRKHCNVEVGKVAARELIAIEPGNPGTYVLLAN 491
Query: 543 LYSVIGKKRD-GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
+ G++ D V + K I K+ GCSW+ + VH FL G S + EI L+
Sbjct: 492 TLAR-GQQWDFVETVWQSMRGKGIEKTAGCSWLEVDRVVHEFLMGESSHPNSDEIYCILE 550
Query: 602 TI 603
+
Sbjct: 551 HL 552
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 116/219 (52%), Gaps = 2/219 (0%)
Query: 42 AAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKD 101
AA++ + G +A ++ MP+ + V N +++ Y++ G E +F+ M E+D
Sbjct: 156 AALVDMYGSLGRVADARRVFDEMPST--NVVLGNTMVACYVRAGDVEAGRDVFDRMAERD 213
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
++W +++ GY ++G AR++F++MP++NV +W ++ + + D ++F MR
Sbjct: 214 PISWNTLMMGYLRQGEAGVARDLFEEMPDRNVNSWNMVIAACSQEGLWADAVEVFNRMRL 273
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+ T+ +L AC + QVHG++ + + + + NS+I MY + G + +
Sbjct: 274 ARFQPDPATMAVLMSACAQLGSLSIASQVHGILRKGCVEMNFHVLNSLIDMYAKCGSVSQ 333
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
A+ +F +D VS+N +I +G +A ++F+ M
Sbjct: 334 AHLLFVETRLKDTVSYNVMICALAQHGHGRDALQIFDEM 372
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 9/259 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
MA+R S+N ++ + A ++F MP RN S+ +I + G++ +A E+
Sbjct: 209 MAERDPISWNTLMMGYLRQG-EAGVARDLFEEMPDRNVNSWNMVIAACSQEGLWADAVEV 267
Query: 61 YVNMP-ARWR-DSVCSNALISGYLKVGRCEEAARIF----EAMVEKDVVAWGSMVDGYCK 114
+ M AR++ D L+S ++G A+++ + VE + S++D Y K
Sbjct: 268 FNRMRLARFQPDPATMAVLMSACAQLGSLSIASQVHGILRKGCVEMNFHVLNSLIDMYAK 327
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G V +A +F + K+ V++ M+ + D +F M G+ +++T +
Sbjct: 328 CGSVSQAHLLFVETRLKDTVSYNVMICALAQHGHGRDALQIFDEMSEEGLQPDAVTFLGV 387
Query: 175 FEACGRFFRYREG-VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KR 232
AC +G + + + + ++ +YGR G ++EA ++ M K
Sbjct: 388 LSACAHAGLVHDGKFYFESMRTNYAIEQSPDHYACMVDLYGRAGLIEEAYQLARAMPVKP 447
Query: 233 DAVSWNSLISGYVHNGEIE 251
A W +LI+ + +E
Sbjct: 448 HAGVWGALINACRKHCNVE 466
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 330/648 (50%), Gaps = 51/648 (7%)
Query: 7 ASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-- 64
A N + L+ N + +A ++F +P R+ VS+ +I+G+V EA L+ M
Sbjct: 50 AEANNQLKILVKTN-HLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRL 108
Query: 65 -------PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
P + + L YL G + +V V +++D Y K G
Sbjct: 109 QSELRIDPFLLSLGLKTCGLGLNYL-YGTNLHGFSVKXGLV-NSVFVGSALLDMYMKIGE 166
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ + ++FD+MP +N V WTA++ G ++ E G F M R + ++S I +A
Sbjct: 167 IGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKA 226
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
G +H + GFD + + NS+ TMY + G +D F M D VSW
Sbjct: 227 SADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSW 286
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFV-------------------SW---------- 268
++++ Y+ G+ + + F+RM + + W
Sbjct: 287 TTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLC 346
Query: 269 ----------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+++T +S G L ++F M +D +TW+ II+ + EEAF +
Sbjct: 347 VGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEY 406
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
M + +PN+ L+SVLS + A L QG Q+HAHV+ + +E + ++L+ +Y+K
Sbjct: 407 LSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAK 466
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG++ +A +IF + + +I+S+ +MISG+A++G +EA+ LF ++ GL P+ +TF+ V
Sbjct: 467 CGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGV 526
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
L+AC+H G+V+ GF YF SM Y+I P EHY CM+D+L RAG L +A LI SM +
Sbjct: 527 LTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQW 586
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
VW LL A R H ++D + AA +++L+P+ A ++ L+++++ GK ++ +RM
Sbjct: 587 DDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRM 646
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKG 606
K K + K PG S + +KD V F++G +S ++I L+ ++ G
Sbjct: 647 LMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASG 694
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 42/291 (14%)
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
L + F D+ N+ + + + + +A +F + +RD VSW ++ISGYV++ + E
Sbjct: 39 LNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSE 98
Query: 253 AYRLFERMP---------------------GKDFVSWTTMITGFSSK------------- 278
A RLF +M G +++ + T + GFS K
Sbjct: 99 ALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYL-YGTNLHGFSVKXGLVNSVFVGSAL 157
Query: 279 -------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
G + +S ++F+ MP ++ VTWTA+I+G V E +F M R V +
Sbjct: 158 LDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDS 217
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ L ASA + LN G IH +K + + + NSL ++Y+KCG + F
Sbjct: 218 YAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRK 277
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ ++VS+ ++++ + Q G + L F++M+ ++PN+ TF +V+S C
Sbjct: 278 MRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCC 328
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/539 (30%), Positives = 300/539 (55%), Gaps = 30/539 (5%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN+LI Y+++G +A R F+ + KD VAW ++ G K G + + + + + P ++V
Sbjct: 145 SNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDV 204
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++WT+++ Y + + + F +M G+A + +T+ + AC + G +H L
Sbjct: 205 ISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLL 264
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V G L ++I MY + G A +VF + +
Sbjct: 265 VEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGR---------------------- 302
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
G SW +I G+ G+++ + LF+ M +D +T+ ++++G++++ Q
Sbjct: 303 --------GPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLR 354
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EA F+ M R D+R + T+ ++L+A A+ L QG +HA + + +E+D+ + +L+
Sbjct: 355 EALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALL 414
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y KCG V +A +F + +R++ ++ +MI+G A NG+G+ AL F +M+ +G PN +
Sbjct: 415 DMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSV 474
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
++++VL+AC+H L+ EG +YF M+ LYNI P EHY CM+D+LGR+G L EA+DL+ +
Sbjct: 475 SYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKT 534
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
M +P +W ++L A R H ++DLA+ AA+HL++LEPD YV L ++Y + +
Sbjct: 535 MPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENA 594
Query: 554 NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+++RM + ++++K+ G S I + +VH F+ KS + EI L+ IS K +
Sbjct: 595 SKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGY 653
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 155/367 (42%), Gaps = 67/367 (18%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +FD+MP + TA+ F LF MRR G+ + T LF+
Sbjct: 56 ALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSS 115
Query: 181 FFRYRE---GVQVHGLVSRFGFDYDI-ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
R +H R + NS+I MY RLG +A + F + +DAV+
Sbjct: 116 SSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVA 175
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
W LISG G + + L + P +D +SWT++I +S
Sbjct: 176 WTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYS-------------------- 215
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+ EA F ML + P+++T+ +VLSA A L G +H
Sbjct: 216 -----------RANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLL 264
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGN----------------------VVDAY-------- 386
V + M + ++ +L+ +Y+KCG+ ++D Y
Sbjct: 265 VEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDV 324
Query: 387 --RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
+F ++ R+I+++NSM++G+ +G EAL LF M+ L + T +++L+AC
Sbjct: 325 ARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACAS 384
Query: 445 VGLVEEG 451
+G +++G
Sbjct: 385 LGALQQG 391
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 149/400 (37%), Gaps = 130/400 (32%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+NA+I + + A +F M +R+ +++ +M+TG++ G EA L+++M R
Sbjct: 308 SWNAIIDGYCKHG-HVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSM--R 364
Query: 68 WRD------------SVCSN---------------------------ALISGYLKVGRCE 88
D + C++ AL+ Y+K GR +
Sbjct: 365 RHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVD 424
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
EA +F+ M ++DV W +M+ G +A+ M
Sbjct: 425 EATIVFQRMGKRDVHTWTAMIAG----------------------LAFNGMGKA------ 456
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN- 207
+ F MR G NS++ + AC EG R FD IL N
Sbjct: 457 ---ALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEG--------RLYFDEMRILYNI 505
Query: 208 --------SIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+I + GR G +DEA + V +M + +AV W S++S + I+ A E
Sbjct: 506 HPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAE 565
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
L + P++D V + + + ++++ Q+E A +
Sbjct: 566 ---------------------------HLLKLEPDEDGV-YVQLYNIYIDSRQWENASKI 597
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
+ M + V+ +A +++ Q+H VV
Sbjct: 598 RMLMEERQVK-----------KTAGYSSITVAGQVHKFVV 626
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/619 (31%), Positives = 334/619 (53%), Gaps = 47/619 (7%)
Query: 16 LINNNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRD-- 70
L NC + + +F M R+ VS+ ++I F G + EA L+ M R +R
Sbjct: 50 LFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNM 109
Query: 71 -SVCSNALISGYLKVGRCEEAARIF--EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
S+ S + L+ G + + ++ V ++VD Y K G V ++R +FD+
Sbjct: 110 VSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDE 169
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
+ E+N V+W A++ ++ +D ++F M GG+ NS+T + + + G
Sbjct: 170 ISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFG 229
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++HG RFG + DI + N++I MY + G +A+ VF+ + +++ VSWN++++ + N
Sbjct: 230 KEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQN 289
Query: 248 GEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLE-------------KSIELF-- 288
A L +M + V++T ++ + G L S++LF
Sbjct: 290 RLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVS 349
Query: 289 NMMPE-------------------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
N + + +D+V++ +I G+ E+ R F+EM K ++
Sbjct: 350 NALTDMYAKCGCLNLARRVFKISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKL 409
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ ++ V+SA A A L QG ++H V+ ++ + + I N+L+ Y KCG + A ++F
Sbjct: 410 DVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVF 469
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
I R+ S+NSMI G+ G A+NLF MK++G+ + +++++VLSAC+H GLVE
Sbjct: 470 RQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVE 529
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
EG YF+ M+ + NI+P HYACMVD+LGRAG + EA+ LI S+ EP VWGALLGA
Sbjct: 530 EGKKYFEHMQ-VQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGA 588
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
R H ++LA AA+HL +L+P + Y VLS++Y+ GK + N+VR K + +K+P
Sbjct: 589 CRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNP 648
Query: 570 GCSWIILKDKVHLFLAGRK 588
GCSW+ + ++VH F+AG +
Sbjct: 649 GCSWVQIDNQVHAFVAGER 667
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 198/399 (49%), Gaps = 41/399 (10%)
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
+F+ + DV +++ Y G + + + +FD+M E++VV+W +++ + + +
Sbjct: 33 VFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEA 92
Query: 153 FDLFLSMR-RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
LF M R G N +++ + C G Q+H V + G D + +GN+++
Sbjct: 93 IHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVD 152
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVS 267
+YG+ G++ ++ +VF +S+R+ VSWN++I+ + ++A +F M + V+
Sbjct: 153 VYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVT 212
Query: 268 WTTM---------------ITGFSSKGNLEKSI--------------------ELFNMMP 292
+++M I GFS + LE I +FN +
Sbjct: 213 FSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIG 272
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
EK+ V+W A+++ F N A +M PN +T ++VL A A L G +
Sbjct: 273 EKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKE 332
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
IHA ++ D+ + N+L +Y+KCG + A R+F I R+ VSYN +I G++Q
Sbjct: 333 IHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTN 391
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
E+L LF +M +G+ + ++++ V+SAC ++ +++G
Sbjct: 392 CSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQG 430
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 182/401 (45%), Gaps = 70/401 (17%)
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G+ + T + +AC ++G ++HG+V + GFD D+ +GN+++ YG G
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCG----- 56
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
+++ R+F+ M +D VSW ++I FS
Sbjct: 57 --------------------------GLKDVKRVFDEMLERDVVSWNSVIGVFS------ 84
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM-LRKDVRPNQLTLSSVLSAS 341
+ GF Y EA F EM LR RPN +++ SVL
Sbjct: 85 --------------------VHGF-----YAEAIHLFCEMNLRSGFRPNMVSIVSVLPVC 119
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
A G QIH +VVK ++S V++ N+LV +Y KCG V D+ R+F I ERN VS+N
Sbjct: 120 AGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWN 179
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT 460
++I+ A ++AL +FR M D G+ PN +TF S+L + L + G I+ S++
Sbjct: 180 AIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR- 238
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA-GRTHLNLDLA 519
+ +E ++D+ ++G +A ++ N + E W A++ + L L
Sbjct: 239 -FGLESDIFVANALIDMYAKSGRSLQASNVFNQIG-EKNIVSWNAMVANFAQNRLELAAV 296
Query: 520 KLAAQHLMELE-PDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
L Q + E P+S T VL + IG R G + +
Sbjct: 297 DLVRQMQADGEIPNSVTFTNVLPAC-ARIGFLRPGKEIHAR 336
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 274/522 (52%), Gaps = 31/522 (5%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ D +V Y GR+ EAR +FDKM ++VV W+ M+DGY + F D LF
Sbjct: 154 DSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEE 213
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M+ + + + L+ + ACGR G +H + D L ++++TMY G
Sbjct: 214 MKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGS 273
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
MD A LFE+M K+ V+ T M+TG+S
Sbjct: 274 MDLA-------------------------------LNLFEKMTPKNLVASTAMVTGYSKL 302
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G +E + +FN M +KD V W+A+ISG+ ++ +EA F EM ++P+Q+T+ SV+
Sbjct: 303 GQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVI 362
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+A A L+Q IH V K + I N+L+ +Y+KCG++ A RIF + +N++
Sbjct: 363 TACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVI 422
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+ MIS FA +G AL F +M+DE + PN ITF+ VL AC+H GLVEEG F SM
Sbjct: 423 SWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSM 482
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+NI P HY CMVD+ GRA L EA++L+ +M P +WG+L+ A R H ++L
Sbjct: 483 INEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIEL 542
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+ AA+ L+EL+PD +V LS++Y+ + D +VR K K I K GCS L +
Sbjct: 543 GEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNN 602
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
++H FL +S EI L + K + + S+L
Sbjct: 603 EIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSIL 644
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 179/389 (46%), Gaps = 49/389 (12%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----------------PA 66
I EA +F M R+ V+++ MI G+ + G+F +A L+ M A
Sbjct: 173 IAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSA 232
Query: 67 RWR---------------------DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAW 105
R D +AL++ Y G + A +FE M K++VA
Sbjct: 233 CGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVAS 292
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+MV GY K G++ AR +F++M +K++V W+AM+ GY + D ++ +LF M+ G+
Sbjct: 293 TAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIK 352
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ +T+ + AC + +H V + GF + + N++I MY + G ++ A ++
Sbjct: 353 PDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRI 412
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNL 281
F M +++ +SW +IS + +G+ A R F +M ++ +++ ++ S G +
Sbjct: 413 FDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLV 472
Query: 282 EKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
E+ ++F M + ++T + ++ F EA M + PN + S
Sbjct: 473 EEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAM---PLAPNVIIWGS 529
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESD 365
+++A + G +++++ + D
Sbjct: 530 LMAACRVHGEIELGEFAAKRLLELDPDHD 558
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 154/334 (46%), Gaps = 71/334 (21%)
Query: 189 QVHGLVSRFGFDYDI-ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
QVH + R D +L +I+ +D A VF+++ K + N + +
Sbjct: 41 QVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRS 100
Query: 248 GEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIE----------------- 286
E E+ ++ERM + D S+ ++ S +L + +E
Sbjct: 101 EEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQ 160
Query: 287 ------------------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+F+ M +D VTW+ +I G+ + + +A F EM +V
Sbjct: 161 TGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVE 220
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN------- 381
P+++ LS+VLSA L+ G IH +++ N+ D +Q++LV++Y+ CG+
Sbjct: 221 PDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNL 280
Query: 382 ------------------------VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+ +A +F + ++++V +++MISG+A++ +EAL
Sbjct: 281 FEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEAL 340
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
NLF +M+ G+ P+Q+T LSV++AC H+G +++
Sbjct: 341 NLFNEMQSLGIKPDQVTMLSVITACAHLGALDQA 374
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 119/226 (52%), Gaps = 3/226 (1%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I+ + +L+ ++ +FN++P+ + + +E+ E+ + M + + +
Sbjct: 62 VISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVD 121
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ + +L A + +L +G +IH K+ +SD +Q LV +Y+ CG + +A +F
Sbjct: 122 RFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFD 181
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ R++V+++ MI G+ Q+GL +AL LF +MK+ + P+++ +VLSAC G +
Sbjct: 182 KMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSY 241
Query: 451 G-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
G I+ M+ NI P + +V + GS+ A++L MT
Sbjct: 242 GKMIHDFIMEN--NIVVDPHLQSALVTMYASCGSMDLALNLFEKMT 285
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/455 (36%), Positives = 271/455 (59%), Gaps = 1/455 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++F ++P+ + + M+ G + L+ M R + +S T + +AC R
Sbjct: 61 AHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTR 120
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F G VHG+V R GF + ++ N+++ + + G ++ A +F K D V+W+SL
Sbjct: 121 LFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSL 180
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GY G+++ A +LF MP +D VSW MITG+ +G +E + LF+ P KD V+W
Sbjct: 181 IAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWN 240
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+I+G+V ++A F EM R V P+++TL S+LSA A L G ++HA V+++
Sbjct: 241 AMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEI 300
Query: 361 NM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+M + + N+L+ +Y+KCGN+ ++ +F +I +++++S+NS+I G A +G G+E+L+L
Sbjct: 301 SMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSL 360
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F+ M+ + PN+ITF+ VL AC+H G ++EG+ YF M + Y IEP H CMVD+LG
Sbjct: 361 FKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLG 420
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L EA I+SM EP +W LL A + H +++LAK+A + L + D + YV+
Sbjct: 421 RAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVL 480
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+S+LY+ G+ +VR + K G S++
Sbjct: 481 MSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFV 515
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 123/227 (54%), Gaps = 5/227 (2%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V ++LI+GY + G + A ++F M E+D+V+W M+ GY K+G + AR +FD+ P
Sbjct: 173 DVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAP 232
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
K+VV+W AM+ GY+ + +LF M R G+ + +TL L AC G +
Sbjct: 233 VKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKK 292
Query: 190 VHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
VH V +LGN++I MY + G + E+ VF ++ +D +SWNS+I G +G
Sbjct: 293 VHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHG 352
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
+E+ LF+ M +++ ++ S G +++ + F++M
Sbjct: 353 HGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLM 399
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 44/277 (15%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP R+ VS+ MITG+V++G A L+ P +D V NA+I+GY+ G
Sbjct: 193 ARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPV--KDVVSWNAMIAGYVVCG 250
Query: 86 RCEEAARIFEAMVEKDV--------------------------------VAWG------- 106
++A +F M V ++ G
Sbjct: 251 LSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLG 310
Query: 107 -SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+++D Y K G + E+ ++F + +K+V++W +++ G ++ LF M+R +
Sbjct: 311 NALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKIC 370
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLV-SRFGFDYDIILGNSIITMYGRLGFMDEANK 224
N IT + AC EG + L+ S + + +I ++ M GR G + EA K
Sbjct: 371 PNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAK 430
Query: 225 -VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ SM + +A+ W +L++ +G++E A E++
Sbjct: 431 FIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKL 467
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 329/629 (52%), Gaps = 53/629 (8%)
Query: 26 AFEIFATMPMR-NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
A ++F MP + + VS+ +MI+ + G EA L+ M + S+ N + +
Sbjct: 270 ARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQ---KASLAPNTY-TFVAAL 325
Query: 85 GRCEEAARIFEAMVEK----------DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
CE+++ I + M +V +++ Y + G++ EA IF M + + +
Sbjct: 326 QACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTI 385
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W +M+ G+++ + + + MR G + + + + A R G+Q+H
Sbjct: 386 SWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYA 445
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G D D+ +GNS++ MY + M + +F M +D VSW ++I+G+ NG A
Sbjct: 446 MKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRAL 505
Query: 255 RLFE--------------------------------------RMPGKDFVSWTTMITGFS 276
LF R D V ++ +
Sbjct: 506 ELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYG 565
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
GN++ + +F ++ KD V+WT++IS +V+N EA F M V P+ ++L S
Sbjct: 566 ECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVS 625
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+LSA+A+ + L +G +IH +++ + S+ ++LV +Y++CG + + +F I ++
Sbjct: 626 ILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKD 685
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+V + SMI+ + +G G A++LFR+M+DE + P+ I F++VL AC+H GL+ EG + +
Sbjct: 686 LVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLE 745
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
SMK Y +EP PEHY C+VD+LGRA L EA + M EP VW ALLGA + H N
Sbjct: 746 SMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNK 805
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+L ++AAQ L+E++P++ YV++S++Y+ + +D VRM+ K ++K+PGCSWI +
Sbjct: 806 ELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEV 865
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
+KVH F+A KS EI L I++
Sbjct: 866 GNKVHTFMARDKSHPQSYEIYSKLSQITE 894
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 253/528 (47%), Gaps = 72/528 (13%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-SVCSNALI--- 78
+ +A ++F MP + ++ AMI +V G + ELY M C+ I
Sbjct: 166 LVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKA 225
Query: 79 SGYLKVGRCEEAAR---IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVV 134
G LK RC I E V VA S+V Y K + AR++FD+MPEK +VV
Sbjct: 226 CGLLKDRRCGAEVHGLAIKEGYVSIVFVA-NSIVGMYTKCNDLNGARQLFDRMPEKEDVV 284
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W +M+ Y + LF M++ +A N+ T +AC ++G+ +H V
Sbjct: 285 SWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATV 344
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ + ++ + N++I MY R G M EA +F M D +SWNS++SG+V NG EA
Sbjct: 345 LKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEAL 404
Query: 255 RLFERM----PGKDFVSWTTMITGFSSKGNLEKSIE------------------------ 286
+ + M D V+ ++I + GN ++
Sbjct: 405 QFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMY 464
Query: 287 -----------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+F+ MP+KD V+WT II+G N + A F E+ + + + + +S
Sbjct: 465 AKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMIS 524
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L A + ++ +IH+++++ + SD+ +QN +V +Y +CGNV A R+F I+ +
Sbjct: 525 SILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFK 583
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----------H 444
++VS+ SMIS + NGL EAL LF MK+ G+ P+ I+ +S+LSA H
Sbjct: 584 DVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIH 643
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
L+ +GF+ S+ + +VD+ R G+L ++ ++ N
Sbjct: 644 GFLIRKGFVLEGSLAST------------LVDMYARCGTLEKSRNVFN 679
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 231/472 (48%), Gaps = 57/472 (12%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G +++A ++FD MP K + W AM+ Y+ +L+ MR G+ ++ T
Sbjct: 160 YGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTF 219
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM-S 230
+ +ACG R G +VHGL + G+ + + NSI+ MY + ++ A ++F M
Sbjct: 220 PCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPE 279
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT--------------------- 269
K D VSWNS+IS Y NG+ EA RLF M T
Sbjct: 280 KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMF 339
Query: 270 ------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
+I ++ G + ++ +F M + D ++W +++SGFV N
Sbjct: 340 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 399
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
Y EA +++ EM +P+ + + S+++ASA + G QIHA+ +K ++SD+ + NS
Sbjct: 400 YHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNS 459
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
LV +Y+K ++ IF + ++++VS+ ++I+G AQNG AL LFR+++ EG+ +
Sbjct: 460 LVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLD 519
Query: 432 QITFLSVLSACNHVGLVE-----EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+ S+L AC+ + L+ +I K + L ++ G +VD+ G G++
Sbjct: 520 VMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLV-LQNG------IVDVYGECGNVDY 572
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME---LEPDSAT 535
A + + F+ W +++ H L L HLM+ +EPDS +
Sbjct: 573 AARMFELIEFKDVVS-WTSMISC-YVHNGLANEALELFHLMKETGVEPDSIS 622
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 176/356 (49%), Gaps = 43/356 (12%)
Query: 147 DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LVSRFGFDYDIIL 205
+ F+ DLF + + + ++L E CG EG QVH +++ + L
Sbjct: 94 EAFQSLTDLFANQSPSQFSLDEAYSSVL-ELCGSKKALSEGQQVHAHMITSNALFNSVFL 152
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE---EAYR------- 255
++ MYG+ G + +A K+F M + +WN++I YV NGE E YR
Sbjct: 153 STRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGI 212
Query: 256 ----------------LFERMPGKD------------FVSWTTMITGFSSKGN-LEKSIE 286
L +R G + V I G +K N L + +
Sbjct: 213 PLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQ 272
Query: 287 LFNMMPEKDDV-TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
LF+ MPEK+DV +W ++IS + +N Q EA R F EM + + PN T + L A ++
Sbjct: 273 LFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSS 332
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+ QG IHA V+K + +V + N+L+++Y++ G + +A IF N+D+ + +S+NSM+S
Sbjct: 333 FIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLS 392
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT 460
GF QNGL EAL + +M+D G P+ + +S+++A G G I+ +MK
Sbjct: 393 GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKN 448
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 118/228 (51%), Gaps = 4/228 (1%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T ++ + G L + +LF+ MP K TW A+I +V N + + + EM +
Sbjct: 154 TRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIP 213
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ T +L A G+++H +K S V + NS+V +Y+KC ++ A ++
Sbjct: 214 LDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQL 273
Query: 389 FTNIDER-NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
F + E+ ++VS+NSMIS ++ NG EAL LF +M+ L PN TF++ L AC
Sbjct: 274 FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSF 333
Query: 448 VEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+++G FI+ +K+ Y I + ++ + R G + EA ++ +M
Sbjct: 334 IKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAANIFYNM 379
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 292/516 (56%), Gaps = 32/516 (6%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A + + +E+D + + + +FD++ + W ++V GY F
Sbjct: 50 AHLIQKGLEQDSFLVTQFISASNSVAHISYSTSVFDRVLSPSTFLWNSLVSGYCAKLQFV 109
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
D L++ M+R A + T L + C + EG+ +HG + R G D DI + S++
Sbjct: 110 DIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMALHGSILRCGVDEDIYVTTSLV 169
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSW-------------------------------NS 239
+YG+ G +D A KVF MS+R+ VSW N+
Sbjct: 170 NLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGNLVEAKRLFDLMPERNVASWNA 229
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+I GY+ G+++ A + F+ MP K+ VS+TTMI G++ G++ + LF PE+D + W
Sbjct: 230 IIGGYMKMGDVKSAEKAFDEMPEKNVVSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAW 289
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+A+ISG+ N Q EA + F+EM ++V+P++ L+S++ A + L+ + ++ +
Sbjct: 290 SALISGYTQNGQPNEAVKTFLEMSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATR 349
Query: 360 MNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+++ + +L+ + +KCGN+ A +F + +R+++SY S++ G + +G G++A++
Sbjct: 350 CSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVS 409
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M E L P+ + F +L+AC+ GLV+EG+ YF+ M+ Y++ P +HYAC+VD+L
Sbjct: 410 LFERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLL 469
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
R+G L EA +LI S+ + G WGALLGA + + + +LA++ A L+E+EP++A YV
Sbjct: 470 SRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSELAEVVASRLIEIEPENAGNYV 529
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+LS++Y+ + D + VR + + +RK PGCSWI
Sbjct: 530 LLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI 565
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 147/272 (54%), Gaps = 9/272 (3%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCS-NALISGYLKV 84
A ++F M RN VS+ AMI G+ G EA+ L+ MP R +V S NA+I GY+K+
Sbjct: 181 ARKVFDGMSERNVVSWTAMIVGYSSIGNLVEAKRLFDLMPER---NVASWNAIIGGYMKM 237
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
G + A + F+ M EK+VV++ +M+DGY K G ++ AR +F K PE++++AW+A++ GY
Sbjct: 238 GDVKSAEKAFDEMPEKNVVSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYT 297
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY-DI 203
+ + FL M + + LT L AC + V +R D
Sbjct: 298 QNGQPNEAVKTFLEMSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGA 357
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+ ++I M + G M+ A +F M KRD +S+ S++ G +G ++A LFERM G+
Sbjct: 358 HVTAALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGE 417
Query: 264 DF----VSWTTMITGFSSKGNLEKSIELFNMM 291
D V++T ++T S G +++ F MM
Sbjct: 418 DLTPDDVAFTVILTACSRAGLVDEGWHYFEMM 449
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 164/364 (45%), Gaps = 80/364 (21%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D + +L++ Y K G + A ++F+ M E++VV+W +M+ GY G ++EA+ +FD MP
Sbjct: 161 DIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGNLVEAKRLFDLMP 220
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E+NV +W A++ GYMK+ ++ AF+ +
Sbjct: 221 ERNVASWNAIIGGYMKMG----------DVKSAEKAFDEMP------------------- 251
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+ +++ ++I Y + G M A +F +RD ++W++LISGY NG+
Sbjct: 252 ----------EKNVVSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQ 301
Query: 250 IEEAYRLFERMPGK----------------------DFVSW-----------------TT 270
EA + F M + D W T
Sbjct: 302 PNEAVKTFLEMSSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTA 361
Query: 271 MITGFSSK-GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+ ++K GN+E+++ LF MP++D +++ +++ G + ++A F ML +D+ P
Sbjct: 362 ALIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTP 421
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHV-VKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ + + +L+A + +++G + K +M V +V L S+ G + +AY +
Sbjct: 422 DDVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYEL 481
Query: 389 FTNI 392
++
Sbjct: 482 IKSV 485
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 151/346 (43%), Gaps = 49/346 (14%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
QVH + + G + D L I+ + + + VF + WNSL+SGY
Sbjct: 47 QVHAHLIQKGLEQDSFLVTQFISASNSVAHISYSTSVFDRVLSPSTFLWNSLVSGYCAKL 106
Query: 249 EIEEAYRLFERMP---------------------GK------------------DFVSWT 269
+ + L+ RM GK D T
Sbjct: 107 QFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMALHGSILRCGVDEDIYVTT 166
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+++ + G ++ + ++F+ M E++ V+WTA+I G+ + EA R F M ++V
Sbjct: 167 SLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGNLVEAKRLFDLMPERNVA- 225
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ ++++ + + + + N+ S +++ Y+K G+++ A +F
Sbjct: 226 ---SWNAIIGGYMKMGDVKSAEKAFDEMPEKNVVS----FTTMIDGYAKAGDMLSARNLF 278
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
ER+I++++++ISG+ QNG EA+ F +M + P++ S++ AC+ +G ++
Sbjct: 279 QKAPERDIIAWSALISGYTQNGQPNEAVKTFLEMSSRNVKPDKFVLTSLMLACSQLGNLD 338
Query: 450 EGFIYFKSMKTLYNIEPGPEHY-ACMVDILGRAGSLAEAIDLINSM 494
+ S T +++ H A ++D+ + G++ A+ L M
Sbjct: 339 LA-KWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKM 383
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
Q+HAH+++ +E D + +S + ++ + +F + + +NS++SG+
Sbjct: 47 QVHAHLIQKGLEQDSFLVTQFISASNSVAHISYSTSVFDRVLSPSTFLWNSLVSGYCAKL 106
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
+ ++L+ +MK E P++ TF S+L C G + EG S+ ++
Sbjct: 107 QFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMALHGSILRC-GVDEDIYVT 165
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEP 531
+V++ G+ G + A + + M+ E W A++ + NL + A+ L +L P
Sbjct: 166 TSLVNLYGKGGLIDCARKVFDGMS-ERNVVSWTAMIVGYSSIGNL----VEAKRLFDLMP 220
Query: 532 D 532
+
Sbjct: 221 E 221
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/624 (31%), Positives = 335/624 (53%), Gaps = 43/624 (6%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNALISGYLKVGR 86
+F MP RN V++ +++TG+V+ + L+ M A W + +++S G
Sbjct: 157 VFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGA 216
Query: 87 CEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ R+ V+ V S+++ Y K G V EA+ +F +M +++V+W ++ G
Sbjct: 217 VDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAG 276
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + + LF R + T + + + C + Q+H V + GF D
Sbjct: 277 LLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSD 336
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMM-SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+ +I+ Y + G +D+A +F +M ++ VSW ++I G + N +I A LF RM
Sbjct: 337 GNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMR 396
Query: 262 GKDF----VSWTTMITG-------------------------------FSSKGNLEKSIE 286
+ +++T++T +S GN E+++
Sbjct: 397 EDNVKPNEFTYSTVLTASIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALS 456
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA-TA 345
+F M+ KD V W+A++S + + A FI+M + ++PN+ T+SS + A A+ TA
Sbjct: 457 IFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTA 516
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
++QG Q HA +K + + + ++LV++Y++ G++ A +F +R++VS+NSMIS
Sbjct: 517 GIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMIS 576
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G+AQ+G +EAL+ FR+M+ G+ + TFL+V+ C H GLV+EG YF SM +NI
Sbjct: 577 GYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNIS 636
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
P EHY+CMVD+ RAG L E ++LI M F VW LLGA R H N++L KLAAQ
Sbjct: 637 PTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQK 696
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
L+ LEPD + YV+LS++Y+ G+ ++ + VR K+++K GCSWI +K+KVH F+A
Sbjct: 697 LLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIA 756
Query: 586 GRKSCLDLKEIEVTLQTISKGTKE 609
KS ++I L+ ++ K+
Sbjct: 757 CDKSHPLSEQIYAKLKAMTTRLKQ 780
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 210/422 (49%), Gaps = 46/422 (10%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
++VD Y K G V + R +F+ MP++NVV WT+++ GY++ D LF MR G+
Sbjct: 140 ALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWP 199
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
N T T + A G +VH +FG + + NS+I MY + G ++EA VF
Sbjct: 200 NPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVF 259
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE----RMPGKDFVSWTTMIT--------- 273
M RD VSWN+L++G + N EA +LF M +++T+I
Sbjct: 260 RQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLA 319
Query: 274 ------------GFSSKGN--------------LEKSIELFNMMP-EKDDVTWTAIISGF 306
GF S GN L+ + +F +MP ++ V+WTA+I G
Sbjct: 320 LARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGC 379
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+ N A F M +V+PN+ T S+VL+AS QIHA ++K N +
Sbjct: 380 IQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILL----PQIHAQIIKTNYQHAP 435
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
S+ +L++ YSK GN +A IF ID +++V++++M+S ++Q G + A N+F KM +
Sbjct: 436 SVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQ 495
Query: 427 GLVPNQITFLSVLSAC-NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
G+ PN+ T S + AC + +++G F ++ Y + + +V + R GS+
Sbjct: 496 GMKPNEFTISSAIDACASPTAGIDQGR-QFHAISIKYRYQDAICVGSALVTMYARKGSID 554
Query: 486 EA 487
A
Sbjct: 555 SA 556
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 200/428 (46%), Gaps = 51/428 (11%)
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKG-RVIEAREIFDKMPEKNVVAWT-----AM 139
R + AA +F ++ +A + ++ C AR+ D MP ++ A + A+
Sbjct: 12 RGKHAAAVFGSLKPLSALASAARLEDDCADTCNAPGARQALDGMPSRDAAAGSSSNPVAI 71
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
VD + + D F+ + R G + +L + CG G Q+H L + GF
Sbjct: 72 VDYGRRGKGRGEALDHFVDVHRCGRVQGAAVSRVL-KVCGLIPDRVSGEQLHCLCVKCGF 130
Query: 200 D-YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
D ++ +G +++ MY + G +++ VF M KR+ V+W SL++GYV + LF
Sbjct: 131 DRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFF 190
Query: 259 RMPGKDF----VSWTTMITGFSSKGN---------------------------------- 280
RM + ++T++++ +S+G
Sbjct: 191 RMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCG 250
Query: 281 -LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+E++ +F M +D V+W +++G + NE EA + F + + +Q T S+V+
Sbjct: 251 LVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIK 310
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIV 398
A L Q+H+ V+K SD ++ +++ YSKCG + DA+ IF + +N+V
Sbjct: 311 LCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVV 370
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+ +MI G QN A LF +M+++ + PN+ T+ +VL+A + L + I+ + +
Sbjct: 371 SWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQ---IHAQII 427
Query: 459 KTLYNIEP 466
KT Y P
Sbjct: 428 KTNYQHAP 435
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 14/287 (4%)
Query: 25 EAFEIFATMP-MRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN-----ALI 78
+AF IF MP +N VS+ AMI G ++ A L+ M D+V N ++
Sbjct: 355 DAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRM---REDNVKPNEFTYSTVL 411
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+ + + + A+I + + +++ Y K G EA IF + K+VVAW+A
Sbjct: 412 TASIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSA 471
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR-FFRYREGVQVHGLVSRF 197
M+ Y + + ++F+ M GM N T++ +AC +G Q H + ++
Sbjct: 472 MLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKY 531
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
+ I +G++++TMY R G +D A VF + RD VSWNS+ISGY +G +EA F
Sbjct: 532 RYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTF 591
Query: 258 ERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+M D ++ +I G + G +++ + F+ M +++ T
Sbjct: 592 RQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPT 638
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 134/278 (48%), Gaps = 9/278 (3%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T ++ + G +E +F MP+++ VTWT++++G+V + F M + V
Sbjct: 139 TALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVW 198
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN T +SVLSA A+ ++ G ++HA VK S V + NSL+++YSKCG V +A +
Sbjct: 199 PNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAV 258
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC---NHV 445
F ++ R++VS+N++++G N EAL LF + +Q T+ +V+ C +
Sbjct: 259 FRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQL 318
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
L + S + ++D + G L +A ++ M W A
Sbjct: 319 ALARQ----LHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTA 374
Query: 506 LLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
++G + ++ LA + E ++P+ T VL+
Sbjct: 375 MIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLT 412
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 304/538 (56%), Gaps = 13/538 (2%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP- 129
S+C N+LI Y + G+ E + ++F +MV++++ +W S+V Y + G V +A + D+M
Sbjct: 662 SMC-NSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMET 720
Query: 130 ---EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+ ++V W +++ GY D + ++ G+ N+ +++ L +A +
Sbjct: 721 CGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKL 780
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +HG V R YD+ + ++I MY + G++ A VF MM +++ V+WNSLISG +
Sbjct: 781 GKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSY 840
Query: 247 NGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVT 298
G ++EA L RM + + V+W ++++G+++ G EK++ + M E + V+
Sbjct: 841 TGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVS 900
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTAI+SG N + + F++M + V PN T+SS+L + L G ++H+ +
Sbjct: 901 WTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCL 960
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K N+ D + +LV +Y+K G++ A IF I + + S+N MI G+A GEE +
Sbjct: 961 KNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIA 1020
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
+F M + G+ P+ ITF SVLS C + GLV EG+ YF M++ Y + P EH +CMV++L
Sbjct: 1021 VFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELL 1080
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR+G L EA D I +M +P +WGA L + + H +L+LA++A + L LEP ++ Y+
Sbjct: 1081 GRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYM 1140
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
++ +LYS + + D R+R R+R SWI + VH+F A K+ D EI
Sbjct: 1141 MMINLYSNLNRWGDVERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDEGEI 1198
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 188/381 (49%), Gaps = 36/381 (9%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +IFD+MP+++ +AW +V ++ +E LF MR G T+ L + C
Sbjct: 579 ANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSN 638
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ +G Q+HG V R GF+ ++ + NS+I MY R G ++ + KVF+ M R+ SWNS+
Sbjct: 639 KEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSI 698
Query: 241 ISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
+S Y G +++A L + M D V+W ++++G++SK +I + +
Sbjct: 699 VSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQ---- 754
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
I+G ++PN ++SS+L A + G IH +
Sbjct: 755 ------IAG---------------------LKPNTSSISSLLQAVYEPGLVKLGKAIHGY 787
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
V++ + DV ++ +L+ +Y K G + A +F +DE+NIV++NS+ISG + GL +EA
Sbjct: 788 VIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEA 847
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L +M+ EG+ N +T+ S++S G E+ MK +EP + ++
Sbjct: 848 EALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKK-NGVEPNVVSWTAILS 906
Query: 477 ILGRAGSLAEAIDLINSMTFE 497
+ G+ + + M E
Sbjct: 907 GCSKNGNFGNGLKIFLKMQEE 927
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 145/320 (45%), Gaps = 18/320 (5%)
Query: 15 ALINNNCSIYEAFEIFATMPMRNAVS---YAAMITGFVRRGMFYEAEELYVNMPARWRDS 71
AL + ++ + +I P +++S A G V+ G +A YV W D
Sbjct: 741 ALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLG---KAIHGYVIRNQLWYDV 797
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
LI Y+K G A +F+ M EK++VAW S++ G G + EA + +M ++
Sbjct: 798 YVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKE 857
Query: 132 ----NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
N V W ++V GY E + M++ G+ N ++ T + C + + G
Sbjct: 858 GIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNG 917
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK----RDAVSWNSLISG 243
+++ + G + +S++ + G L + +V S K RDA +L+
Sbjct: 918 LKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDM 977
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM----PEKDDVTW 299
Y +G+++ A +F + K SW MI G++ E+ I +FN M E D +T+
Sbjct: 978 YAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITF 1037
Query: 300 TAIISGFVNNEQYEEAFRWF 319
T+++S N+ E +++F
Sbjct: 1038 TSVLSVCKNSGLVREGWKYF 1057
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 153/339 (45%), Gaps = 47/339 (13%)
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS-----GYVHN 247
L+ RF ++ + +IT Y G A+ VF + R+ VSW + G
Sbjct: 450 LIDRFELEF---ISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDFGVEKY 506
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMIT----------GFSSKGNLEK-------------- 283
+EE RL + D V + GF+ G L K
Sbjct: 507 KVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSAL 566
Query: 284 --------SIEL----FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
S++L F+ MP++DD+ W I+ + + +E+A + F M +
Sbjct: 567 MGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYD 626
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T+ +L + QG QIH +V+++ ES+VS+ NSL+ +YS+ G + + ++F +
Sbjct: 627 STMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNS 686
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ +RN+ S+NS++S + + G ++A+ L +M+ GL P+ +T+ S+LS L +
Sbjct: 687 MVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDA 746
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAG--SLAEAI 488
K ++ + ++P + ++ + G L +AI
Sbjct: 747 IAVLKRIQ-IAGLKPNTSSISSLLQAVYEPGLVKLGKAI 784
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/636 (31%), Positives = 328/636 (51%), Gaps = 47/636 (7%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNM-PARWRDSVCSNALISGYLKVGRCEEAARIFE 95
+ +++ ++ F++RG +EA + +V+M +R + ++ + C E +
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 96 AMVEK----DVVAWGS-MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+V + VV+ G+ +++ Y K G V AR +F +M E ++V+W M+ G E
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFR-YREGVQVHGLVSRFGFDYDIILGNSI 209
+F+ + RGG+ + T+ + AC Q+H + G D + ++
Sbjct: 990 CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTL 1049
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-------- 261
I +Y + G M+EA +F D SWN+++ GY+ +G+ +A RL+ M
Sbjct: 1050 IDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQ 1109
Query: 262 ------------------GK-------------DFVSWTTMITGFSSKGNLEKSIELFNM 290
GK D + ++ + G +E + +FN
Sbjct: 1110 ITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNE 1169
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+P DDV WT +ISG V N Q E A + M V+P++ T ++++ A + L QG
Sbjct: 1170 IPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQG 1229
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
QIHA+ VK+N D + SLV +Y+KCGN+ DA +F + I S+N+MI G AQ+
Sbjct: 1230 RQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQH 1289
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
G EEAL F +MK G+ P+++TF+ VLSAC+H GLV E + F SM+ +Y IEP EH
Sbjct: 1290 GNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEH 1349
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE 530
Y+C+VD L RAG + EA +I+SM FE ++ LL A R ++ + K A+ L+ LE
Sbjct: 1350 YSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALE 1409
Query: 531 PDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSC 590
P + YV+LS++Y+ + + R + ++K PG SW+ LK+KVHLF+AG +S
Sbjct: 1410 PSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSH 1469
Query: 591 LDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
+ I ++ I K +E + P D++L+ +E +
Sbjct: 1470 EETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEE 1505
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 193/394 (48%), Gaps = 21/394 (5%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
S+ +A+ + L +G+ ARI + D +++ Y K G + AR++FD P+
Sbjct: 631 SILRHAIAASDLPLGK-RAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPD 689
Query: 131 --KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+++V W A++ + D DGF LF +RR ++ TL +F+ C
Sbjct: 690 TSRDLVTWNAILSAH--ADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAE 747
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+HG + G +D+ + +++ +Y + G + EA +F M RD V WN ++ YV G
Sbjct: 748 SLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTG 807
Query: 249 EIEEAYRLFERMPG----KDFVSWTTMITGFSSKGN-LEKSIELFNMMPEK--------- 294
EA LF D V+ T+ SK N LE ++ K
Sbjct: 808 LEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDD 867
Query: 295 --DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
D + W +S F+ + EA F++M+ V + LT +LS A L G Q
Sbjct: 868 GSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQ 927
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
IH VV+ ++ VS+ N L+++Y K G+V A +F ++E ++VS+N+MISG A +GL
Sbjct: 928 IHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGL 987
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
E ++ +F + GL+P+Q T SVL AC+ +G
Sbjct: 988 EECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG 1021
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 147/572 (25%), Positives = 245/572 (42%), Gaps = 100/572 (17%)
Query: 57 AEELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
AE L+ V + +W D + AL++ Y K GR EA +F+ M +DVV W M+ Y
Sbjct: 746 AESLHGYAVKIGLQW-DVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYV 804
Query: 114 KKGRVIEAREIFDKM------PE------------------------------------- 130
G EA +F + P+
Sbjct: 805 DTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDD 864
Query: 131 ----KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+V+AW + +++ + D F+ M +A + +T ++
Sbjct: 865 DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLEL 924
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G Q+HG+V R G D + +GN +I MY + G + A VF M++ D VSWN++ISG
Sbjct: 925 GKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCAL 984
Query: 247 NGEIEEAYRLFER------MPGK-----------------------------------DF 265
+G E + +F +P + F
Sbjct: 985 SGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSF 1044
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
VS TT+I +S G +E++ LF D +W A++ G++ + + +A R +I M
Sbjct: 1045 VS-TTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQES 1103
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
R NQ+TL++ A+ L QG QI A VVK D+ + + ++ +Y KCG + A
Sbjct: 1104 GERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESA 1163
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
RIF I + V++ +MISG +NG E AL + M+ + P++ TF +++ AC+ +
Sbjct: 1164 RRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLL 1223
Query: 446 GLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
+E+G I+ ++K N P +VD+ + G++ +A L T W
Sbjct: 1224 TALEQGRQIHANTVK--LNCAFDPFVMTSLVDMYAKCGNIEDARGLFKR-TNTSRIASWN 1280
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
A++ H N A+ A Q E++ TP
Sbjct: 1281 AMIVGLAQHGN---AEEALQFFEEMKSRGVTP 1309
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 198/440 (45%), Gaps = 54/440 (12%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
D+ + N +I + S+ A +F M + VS+ MI+G G+ + ++V
Sbjct: 938 DQVVSVGNCLINMYVKTG-SVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFV 996
Query: 63 NMPARWRDSVCSNAL-ISGYLKV-----GRCEEAARIFEAMVEKDVV----AWGSMVDGY 112
++ R + + ++ L+ G C A +I ++ VV +++D Y
Sbjct: 997 DL---LRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVY 1053
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
K G++ EA +F ++ +W AM+ GY+ F L++ M+ G N ITL
Sbjct: 1054 SKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLA 1113
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+A G ++G Q+ +V + GF+ D+ + + ++ MY + G M+ A ++F+ +
Sbjct: 1114 NAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSP 1173
Query: 233 DAVSWNSLISGYVHNGEIEEAY------RLFERMPGK----------------------- 263
D V+W ++ISG V NG+ E A RL + P +
Sbjct: 1174 DDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIH 1233
Query: 264 ----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
D T+++ ++ GN+E + LF +W A+I G + E
Sbjct: 1234 ANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAE 1293
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM-NMESDVSIQNSL 372
EA ++F EM + V P+++T VLSA + + +++ + + K+ +E ++ + L
Sbjct: 1294 EALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCL 1353
Query: 373 VSLYSKCGNVVDAYRIFTNI 392
V S+ G + +A ++ +++
Sbjct: 1354 VDALSRAGRIREAEKVISSM 1373
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 140/352 (39%), Gaps = 87/352 (24%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM--SKRDAVSWNSLISGY 244
G + H + G D L N++ITMY + G + A K+F + RD V+WN+++S
Sbjct: 645 GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSA- 703
Query: 245 VHNGEIEEAYRLFERMPGKDFVS-----------------------------------WT 269
H + + + LF R+ + FVS W
Sbjct: 704 -HADKARDGFHLF-RLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWD 761
Query: 270 TMITG-----FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+ G ++ G + ++ LF+ M +D V W ++ +V+ EA F E R
Sbjct: 762 VFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNR 821
Query: 325 KDVRPNQLTLSSVLSASAATATLN----QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+RP+ +TL ++ A + N Q Q+ A+ K+ M D +
Sbjct: 822 TGLRPDDVTLCTL--ARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGS---------- 869
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+++++N +S F Q G EA++ F M + + + +TF+ +LS
Sbjct: 870 ---------------DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLS 914
Query: 441 A-----CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
C +G G + + + ++ C++++ + GS++ A
Sbjct: 915 VVAGLNCLELGKQIHGIVVRSGLDQVVSVG------NCLINMYVKTGSVSRA 960
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 289/547 (52%), Gaps = 42/547 (7%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
E D++ + V Y K V + F M +N+ + ++ G+ + + G + +
Sbjct: 122 ESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQ 181
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
+ G N T + + C EG +HG V + G + D L NS++ +Y + G
Sbjct: 182 LLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGS 241
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------------ 260
+ A KVF + +RD VSW +LI+G+V G R+F +M
Sbjct: 242 ANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRS 300
Query: 261 ----------------------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
G DFV T ++ ++ LE + +FN + ++D
Sbjct: 301 CSSLSDVDLGKQVHAQIVKNSLDGNDFVG-TALVDMYAKNRFLEDAETIFNRLIKRDLFA 359
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WT I++G+ + Q E+A + FI+M R+ V+PN+ TL+S LS + ATL+ G Q+H+ +
Sbjct: 360 WTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAI 419
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K D+ + ++LV +Y+KCG V DA +F + R+ VS+N++I G++Q+G G +AL
Sbjct: 420 KAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALK 479
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F M DEG VP+++TF+ VLSAC+H+GL+EEG +F S+ +Y I P EHYACMVDIL
Sbjct: 480 AFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDIL 539
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG E I M +W +LGA + H N++ + AA L ELEP+ + Y+
Sbjct: 540 GRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYI 599
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
+LS++++ G D VR + ++K PGCSW+ + +VH+FL+ S ++EI +
Sbjct: 600 LLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHL 659
Query: 599 TLQTISK 605
LQ + +
Sbjct: 660 KLQDLHQ 666
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 193/399 (48%), Gaps = 40/399 (10%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
R+ + + D W S+V+ Y K + AR++ ++MP ++V W + ++
Sbjct: 14 RVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQE 73
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
LF MR + N L A G +H V ++GF+ DI++ N+ +T
Sbjct: 74 AVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVT 133
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------- 260
MY + ++ + F M + S N+L+SG+ ++ R+ ++
Sbjct: 134 MYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYT 193
Query: 261 ---------------PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMP 292
GK D W +++ ++ G+ + ++F +P
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
E+D V+WTA+I+GFV E Y R F +ML + PN T S+L + ++ + ++ G Q
Sbjct: 254 ERDVVSWTALITGFV-AEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 312
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+HA +VK +++ + + +LV +Y+K + DA IF + +R++ ++ +++G+AQ+G
Sbjct: 313 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 372
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
GE+A+ F +M+ EG+ PN+ T S LS C+ + ++ G
Sbjct: 373 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 411
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 124/255 (48%), Gaps = 4/255 (1%)
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+R+ + D W++++ + +L+ + ++ MP +D W +S + +
Sbjct: 13 FRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQ 72
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EA + F M +R NQ +S++SA+A+ + G IHA V K ESD+ I N+ V
Sbjct: 73 EAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFV 132
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
++Y K +V + ++ F + N+ S N+++SGF ++ + ++ EG PN
Sbjct: 133 TMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMY 192
Query: 434 TFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
TF+S+L C G + EG I+ + +K+ I P + +V++ + GS A +
Sbjct: 193 TFISILKTCASKGDLNEGKAIHGQVIKS--GINPDSHLWNSLVNVYAKCGSANYACKVFG 250
Query: 493 SMTFEPPPGVWGALL 507
+ E W AL+
Sbjct: 251 EIP-ERDVVSWTALI 264
>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
Length = 721
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 329/604 (54%), Gaps = 55/604 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---PARWR-DSVCSNALI 78
+ +A +F MP RN VS++ +I R G+ +A L+ M R R +S AL+
Sbjct: 53 LADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGERDRPNSFTVAALV 112
Query: 79 SGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+G + ++ + V ++D G++VD Y K GRV + F P+++V+
Sbjct: 113 AGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVL 172
Query: 135 AWTAMVDGYMKVDCFEDGF-DLFLSMRRGGMAFNSITLTILFEACGRFFRYRE----GVQ 189
+WT+M+ V+ + G+ D + + + + F + F E G Q
Sbjct: 173 SWTSMIACL--VNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQ 230
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG + + G + D LG +++ MYGR G MDE ++ + + DA S SL++ Y NG
Sbjct: 231 VHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYARNGC 289
Query: 250 IEEAYRLFE-----RMP-----------------------------GKDFVSWTTM---- 271
EA R+F MP K+F T+
Sbjct: 290 NMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNA 349
Query: 272 -ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+T + G++ S +FN + KD ++WTA+++ +V N+ +EA +F EM+RK + +
Sbjct: 350 IVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESS 409
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
++SVL A +AT++L+ G QIH+ VVK+ ++ D S++N+LV++Y+KCG V A +IF
Sbjct: 410 IFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFN 469
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
++ R I+S+N++I+ F+Q+G A+ LF M++E + P+ TF+ +LS+C+ +GLV E
Sbjct: 470 SMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAE 529
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G YFK MKT YN+EP EHY CMVD+ RAG ++A+ I++M +P VW ALL +
Sbjct: 530 GCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASC 589
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H NLDL ++AA+ ++E++P+ +PY++LS +++ I + R R +++RK G
Sbjct: 590 RVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLLDFQQLRKDVG 649
Query: 571 CSWI 574
S +
Sbjct: 650 SSQL 653
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 224/484 (46%), Gaps = 61/484 (12%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA--FNSI 169
Y +G + +AR +FD+MP +NVV+W+ ++ ++ D LF M RGG NS
Sbjct: 47 YQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGERDRPNSF 106
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T+ L C R G QVH + G D D + +++ MY + G + + + F +
Sbjct: 107 TVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLT 166
Query: 230 SKRDAVSWNSLISGYVHNGEI---EEAYRLFERM-------------------------- 260
+R +SW S+I+ V++G+ + A LF++M
Sbjct: 167 PQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLP 226
Query: 261 PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
GK D T ++ + G +++ L + D + T++++ +
Sbjct: 227 SGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYA 285
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EA R F +ML + +Q ++S+L ++ L +IH + +K D
Sbjct: 286 RNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTL 345
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ N++V++Y KCG++ + +F ++ ++ +S+ ++++ + QN L +EAL FR+M +G
Sbjct: 346 LLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKG 405
Query: 428 LVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
L + SVL AC+ + G+ I+ + +K + + E+ +V + + G +
Sbjct: 406 LESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVEN--ALVTMYAKCGVVQV 463
Query: 487 AIDLINSMTFEPPPGV--WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
A+ + NSM G+ W AL+ + H N ++AA L ++ + +V D Y
Sbjct: 464 ALKIFNSMRNR---GIISWNALITSFSQHGN----EVAAIQLFDMMQEE----MVCPDDY 512
Query: 545 SVIG 548
+ +G
Sbjct: 513 TFVG 516
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 167/374 (44%), Gaps = 28/374 (7%)
Query: 11 AMITALIN--NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA-----EELYVN 63
A+ TAL+ C + A +A S +++T + R G EA + L +
Sbjct: 245 ALGTALLAMYGRCGGMDEITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGH 304
Query: 64 MPARWRD-----SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
MP VCS+ G L+V + E + D + ++V Y K G +
Sbjct: 305 MPIDQSAITSLLQVCSSL---GQLRVVK-EIHCYALKNFFRLDTLLLNAIVTVYGKCGDI 360
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+ +F+ + K+ ++WTA++ Y++ D ++ F M R G+ + +T + AC
Sbjct: 361 ASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRAC 420
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G Q+H V + G D D + N+++TMY + G + A K+F+ M R +SWN
Sbjct: 421 SATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWN 480
Query: 239 SLISGYVHNGEIEEAYRLF----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+LI+ + +G A +LF E M D ++ +++ S G + + E F M K
Sbjct: 481 ALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTK 540
Query: 295 DDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
++ +T ++ F ++ +A ++ M +P+QL ++L++ L+
Sbjct: 541 YNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAM---PCQPDQLVWEALLASCRVHGNLDL 597
Query: 350 GSQIHAHVVKMNME 363
G ++++ E
Sbjct: 598 GRMAAKKILEIKPE 611
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 9/287 (3%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR--KDVR 328
++ + ++G+L + +F+ MP ++ V+W+ +I+ +A F MLR + R
Sbjct: 43 LLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGERDR 102
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN T++++++ A G Q+HA VK+ ++ D S+ +LV +Y+KCG V ++R
Sbjct: 103 PNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRA 162
Query: 389 FTNIDERNIVSYNSMISGFAQN---GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
F +R+++S+ SMI+ + G + A+ LF+KM + P TF +L +
Sbjct: 163 FVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVP 222
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
L+ G + + E P ++ + GR G + E L + + +
Sbjct: 223 ELLPSGKQVHGCLVKM-GTEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFSRT--S 279
Query: 506 LLGA-GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
LL A R N++ ++ LM P + L + S +G+ R
Sbjct: 280 LLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLR 326
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H VK+ + + N+L+ Y G++ DA +F + RN+VS++ +I+ ++ G+
Sbjct: 24 VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGV 83
Query: 413 GEEALNLFRKMKDEGL--VPNQITFLSVLSAC 442
+AL+LF M G PN T ++++ C
Sbjct: 84 LGDALSLFAGMLRGGERDRPNSFTVAALVAGC 115
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 304/556 (54%), Gaps = 45/556 (8%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG---RVIEAREIFDKMPE 130
S ++ ++ G A F + K + ++ GY K R+ +AR +FD +P
Sbjct: 15 STVAVAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPH 74
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
+ V++ ++ + ACG R
Sbjct: 75 PDTVSYNTLLSCHF--------------------------------ACGDIDGARRVFST 102
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
+ D+ N++++ + G +EA +F +M R+AVSWN++++ +G++
Sbjct: 103 MPV-------KDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACSGDM 155
Query: 251 EEAYRLFERMPGK-DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
A LF P K D + WT M++G+ GN++K++E F MP ++ V+W A+++G+V N
Sbjct: 156 GAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKN 215
Query: 310 EQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
+ ++A R F M+ V+PN TLSSVL + + L G Q+H +K+ + +V++
Sbjct: 216 SRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTV 275
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
SL+S+Y KCG++ DA ++F + ++IV++N+MISG+AQ+G G +A+ LF KMKDEG+
Sbjct: 276 GTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGV 335
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
VP+ IT L+VL+AC H GL + G F++M+ Y IEP +HY+CMVD+L RAG L A+
Sbjct: 336 VPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAV 395
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
++I+SM FEP P +G LL A R + NL+ A+ AA+ L+E +P +A YV L+++Y+V
Sbjct: 396 NMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVAN 455
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K D +RVR K + K+PG SW+ +K H F + + L I L + K
Sbjct: 456 KWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRLQMLMK 515
Query: 609 EFDW-PKHDWSLLGLE 623
+ P D++L +E
Sbjct: 516 AMGYVPDLDFALHDVE 531
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 156/329 (47%), Gaps = 41/329 (12%)
Query: 4 RTSASYNAMIT--ALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
+T+ +YN ++ A + + +A +F ++P + VSY +++ G A ++
Sbjct: 41 KTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVF 100
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFE-----------AMV------------ 98
MP +D N ++SG K G EEAA +F AMV
Sbjct: 101 STMPV--KDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACSGDMGAA 158
Query: 99 ---------EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
+ D + W +MV GY G V +A E F MP +N+V+W A+V GY+K
Sbjct: 159 EDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRA 218
Query: 150 EDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
+D +F +M + N+ TL+ + C G QVH + ++ +G S
Sbjct: 219 DDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTS 278
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----D 264
+++MY + G +++A KVF MS +D V+WN++ISGY +G +A +LFE+M + D
Sbjct: 279 LLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPD 338
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPE 293
+++ ++T G + I+ F M E
Sbjct: 339 WITLLAVLTACIHTGLCDFGIQCFETMQE 367
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 330/617 (53%), Gaps = 32/617 (5%)
Query: 20 NCSIYEAFEIFATMPMRNAVS-----YAAMITGFVRRGMFYEAEELYVNMPARWRDSVCS 74
NC E ++ ++ +R +S +++T FV+ G A + + NM R D V
Sbjct: 192 NCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDER--DGVSW 249
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKD----VVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
N +I+GY + G +EA R+ + M + +V + M+ Y + G ++ KM
Sbjct: 250 NVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMES 309
Query: 131 ----KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+V WT+M+ G+ + D F M G+ N+IT+ AC +
Sbjct: 310 VGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQN 369
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G+++H + G + ++GNS+I MY + G ++ A VF + ++D +WNS+I GY
Sbjct: 370 GLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQ 429
Query: 247 NGEIEEAYRLFER------MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD----- 295
G +AY LF R MP + V+W MI+G G+ +++++LF +M EKD
Sbjct: 430 AGYGGKAYELFMRLRESTVMP--NVVTWNAMISGCIQNGDEDQAMDLFQIM-EKDGGVKR 486
Query: 296 -DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
+W ++I+G+ + +A F +M + PN +T+ S+L A A + +IH
Sbjct: 487 NTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIH 546
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
V++ N+ES++++ NSLV Y+K GN+ + +F + ++I+++NS+I+G+ +G +
Sbjct: 547 GCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSD 606
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
A LF +M++ G+ PN+ T S++ A G+V++G F S+ + I P +HY M
Sbjct: 607 SAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAM 666
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
VD+ GR+G LA+AI+ I M EP +W +LL A R H NL+LA LAA+ L ELEPD+
Sbjct: 667 VDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNH 726
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLK 594
Y +L Y++ GK +VR K ++K W+ +++KVHLF+ G +S LD+
Sbjct: 727 VIYRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLFVTGDQSKLDV- 785
Query: 595 EIEVTLQTISKGTKEFD 611
+ +++I K+F+
Sbjct: 786 -LNTWIKSIEGKVKKFN 801
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 216/404 (53%), Gaps = 15/404 (3%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+V Y K G + +AR++FD M E+N+ W+AM+ Y + +++ +LF M G+ +
Sbjct: 120 LVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPD 179
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ + +ACG +H LV R G + L NSI+T + + G + A K F
Sbjct: 180 AFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFG 239
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKG---- 279
M +RD VSWN +I+GY G +EA RL + M + F V++ MI +S G
Sbjct: 240 NMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDL 299
Query: 280 --NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
+L+K +E + P D TWT++ISGF + + +A +F +M+ V PN +T++S
Sbjct: 300 VIDLKKKMESVGLAP--DVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASA 357
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
SA A+ +L G +IH +KM + + + NSL+ +YSKCG + A +F I E+++
Sbjct: 358 TSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDV 417
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
++NSMI G+ Q G G +A LF ++++ ++PN +T+ +++S C G ++ F+
Sbjct: 418 YTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQI 477
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL---INSMTFEP 498
M+ ++ + ++ + G +A+ + + S+ F P
Sbjct: 478 MEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSP 521
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 143/286 (50%), Gaps = 10/286 (3%)
Query: 217 GFMDEANKVFSMMSKRDA-VSWNS---LISGYVHNGEIEEAYRLFERMP----GKDFVSW 268
G + EA +SKR + +S N+ L+ + G IE L RM FV
Sbjct: 59 GLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRMGLVHRVNPFVE- 117
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T +++ ++ G L+ + ++F+ M E++ TW+A+I + ++++E F M+ V
Sbjct: 118 TKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVL 177
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P+ +L A L IH+ V++ + + + NS+++ + KCG + A +
Sbjct: 178 PDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKF 237
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F N+DER+ VS+N MI+G+ Q G G+EA L M ++G P +T+ ++++ + +G
Sbjct: 238 FGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDC 297
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ K M+++ + P + M+ ++ +++A+D M
Sbjct: 298 DLVIDLKKKMESV-GLAPDVYTWTSMISGFSQSSRISQALDFFKKM 342
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 311/574 (54%), Gaps = 44/574 (7%)
Query: 96 AMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
++ D A G++V Y + GRV +A FD+M ++V AW AM+ G + + L
Sbjct: 98 GLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGL 157
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
F M G+A +++T++ + C + +H + G D ++ + N++I +YG+
Sbjct: 158 FGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGK 217
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK------------ 263
LG ++E KVF MS RD V+WNS+ISG+ G++ A +F M
Sbjct: 218 LGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSL 277
Query: 264 ----------------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
D ++ ++ ++ +E + +F+ MP +D
Sbjct: 278 ASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRD 337
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIH 354
V+W +I+G++ N EA + M + + ++P Q T SVL A + L QG+++H
Sbjct: 338 AVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMH 397
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
A +K + DV + ++ LY+KCG + +A +F R+ +N++ISG +G G
Sbjct: 398 ALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGA 457
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
+AL+LF +M+ EG+ P+ +TF+S+L+AC+H GLV++G +F M+T Y I+P +HYACM
Sbjct: 458 KALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACM 517
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
VD+ GRAG L +A D I +M +P +WGALLGA R H N+++ K+A+Q+L EL+P +
Sbjct: 518 VDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNV 577
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLK 594
YV++S++Y+ +GK + VR + + ++K+PG S I +K V++F +G + + +
Sbjct: 578 GYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQ 637
Query: 595 --EIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
EI+ L + + + P + + L +E D
Sbjct: 638 HEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEED 671
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 129/554 (23%), Positives = 228/554 (41%), Gaps = 123/554 (22%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA 96
+A + A++ ++R G +A + M R RD NA++SG + R EA +F
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEM--RHRDVPAWNAMLSGLCRNARAAEAVGLFGR 160
Query: 97 MV---------------------------------------EKDVVAWGSMVDGYCKKGR 117
MV + ++ +M+D Y K G
Sbjct: 161 MVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGM 220
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ E R++FD M +++V W +++ G+ + ++F MR G++ + +TL L A
Sbjct: 221 LEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASA 280
Query: 178 CGRFFRYREGVQVHGLVSRFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
+ G VH + R G+D DII GN+I+ MY +L ++ A ++F M RDAVS
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVS 340
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKD--------FVS--------------------- 267
WN+LI+GY+ NG EA +++ M + FVS
Sbjct: 341 WNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALS 400
Query: 268 -----------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
T +I ++ G L++++ LF P + W A+ISG + +A
Sbjct: 401 IKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKAL 460
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
F +M ++ + P+ +T S+L+A + ++QG NM
Sbjct: 461 SLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNF------FNM-------------- 500
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+ AY I Y M+ F + G ++A + R M + P+ +
Sbjct: 501 -----MQTAYGIKPIAKH-----YACMVDMFGRAGQLDDAFDFIRNMP---IKPDSAIWG 547
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAG---SLAEAIDLIN 492
++L AC G VE G + + + L+ ++P +Y M ++ + G + E L+
Sbjct: 548 ALLGACRIHGNVEMGKV---ASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVR 604
Query: 493 SMTFEPPPGVWGAL 506
+ PG W ++
Sbjct: 605 RQNLQKTPG-WSSI 617
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 181/415 (43%), Gaps = 41/415 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS--- 79
I A +F +MP+R+AVS+ +ITG+++ G+ EA +Y +M +S
Sbjct: 323 IEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLP 382
Query: 80 GYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
Y +G ++ R+ ++ DV ++D Y K G++ EA +F++ P ++
Sbjct: 383 AYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGP 442
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV- 194
W A++ G LF M++ G++ + +T L AC +G ++
Sbjct: 443 WNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQ 502
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEIE-- 251
+ +G ++ M+GR G +D+A + + +M K D+ W +L+ +G +E
Sbjct: 503 TAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMG 562
Query: 252 --EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD---DVTWTAI-ISG 305
+ LFE P K+ + M ++ G + E+ +++ ++ W++I +
Sbjct: 563 KVASQNLFELDP-KNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKR 621
Query: 306 FVN----------NEQYEEAFRWFIEMLRKDVR-----PNQLTLSSVLSASAATATLNQG 350
VN + Q+EE R +++L K +R P+ + + LN
Sbjct: 622 SVNVFYSGNQMNIHPQHEEIQRELLDLLAK-IRSLGYVPDYSFVLQDVEEDEKEQILNNH 680
Query: 351 SQ---IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
S+ I ++ + + I +L CG+ +A + + I ER I+ +S
Sbjct: 681 SERLAIAFGIINTPPRTPLHIYKNL----RVCGDCHNATKYISKITEREIIVRDS 731
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 13/171 (7%)
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ T +L A+ T +Q+HA +++ + D +LV Y + G V DAYR
Sbjct: 70 DAFTFPPLLRAAQGPGT---AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + R++ ++N+M+SG +N EA+ LF +M EG+ + +T SVL C V
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMC-----V 181
Query: 449 EEGFIYFKSMKTLYNIEPG--PEHYAC--MVDILGRAGSLAEAIDLINSMT 495
G LY ++ G E + C M+D+ G+ G L E + + M+
Sbjct: 182 LLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMS 232
>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
Length = 671
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 328/604 (54%), Gaps = 55/604 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---PARWR-DSVCSNALI 78
+ +A +F MP RN VS++ +I R G+ +A L+ M R R +S AL+
Sbjct: 53 LADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGERDRPNSFTVAALV 112
Query: 79 SGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+G + ++ + V ++D G++VD Y K GRV + F P+++V+
Sbjct: 113 AGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVL 172
Query: 135 AWTAMVDGYMKVDCFEDGF-DLFLSMRRGGMAFNSITLTILFEACGRFFRYRE----GVQ 189
+WT+M+ V+ + G+ D + + + + F + F E G Q
Sbjct: 173 SWTSMIACL--VNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQ 230
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG + + G + D LG +++ MYGR G MDE ++ + + DA S SL++ Y NG
Sbjct: 231 VHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYARNGC 289
Query: 250 IEEAYRLFERM----------------------------------PGKDFVSWTTM---- 271
EA R+F M K+F T+
Sbjct: 290 NMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNA 349
Query: 272 -ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+T + G++ S +FN + KD ++WTA+++ +V N+ +EA +F EM+RK + +
Sbjct: 350 IVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESS 409
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
++SVL A +AT++L+ G QIH+ VVK+ ++ D S++N+LV++Y+KCG V A +IF
Sbjct: 410 IFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFN 469
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
++ R I+S+N++I+ F+Q+G A+ LF M++E + P+ TF+ +LS+C+ +GLV E
Sbjct: 470 SMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAE 529
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G YFK MKT YN+EP EHY CMVD+ RAG ++A+ I++M +P VW ALL +
Sbjct: 530 GCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASC 589
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H NLDL ++AA+ ++E++P+ +PY++LS +++ I + R R +++RK G
Sbjct: 590 RVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLLDFQQLRKDVG 649
Query: 571 CSWI 574
S +
Sbjct: 650 SSQL 653
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 224/484 (46%), Gaps = 61/484 (12%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA--FNSI 169
Y +G + +AR +FD+MP +NVV+W+ ++ ++ D LF M RGG NS
Sbjct: 47 YQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGERDRPNSF 106
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T+ L C R G QVH + G D D + +++ MY + G + + + F +
Sbjct: 107 TVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLT 166
Query: 230 SKRDAVSWNSLISGYVHNGEI---EEAYRLFERM-------------------------- 260
+R +SW S+I+ V++G+ + A LF++M
Sbjct: 167 PQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLP 226
Query: 261 PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
GK D T ++ + G +++ L + D + T++++ +
Sbjct: 227 SGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYA 285
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EA R F +ML + +Q ++S+L ++ L +IH + +K D
Sbjct: 286 RNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTL 345
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ N++V++Y KCG++ + +F ++ ++ +S+ ++++ + QN L +EAL FR+M +G
Sbjct: 346 LLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKG 405
Query: 428 LVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
L + SVL AC+ + G+ I+ + +K + + E+ +V + + G +
Sbjct: 406 LESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENA--LVTMYAKCGVVQV 463
Query: 487 AIDLINSMTFEPPPGV--WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
A+ + NSM G+ W AL+ + H N ++AA L ++ + +V D Y
Sbjct: 464 ALKIFNSMRNR---GIISWNALITSFSQHGN----EVAAIQLFDMMQEE----MVCPDDY 512
Query: 545 SVIG 548
+ +G
Sbjct: 513 TFVG 516
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 167/374 (44%), Gaps = 28/374 (7%)
Query: 11 AMITALIN--NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA-----EELYVN 63
A+ TAL+ C + A +A S +++T + R G EA + L +
Sbjct: 245 ALGTALLAMYGRCGGMDEITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGH 304
Query: 64 MPARWRD-----SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
MP VCS+ G L+V + E + D + ++V Y K G +
Sbjct: 305 MPIDQSAITSLLQVCSSL---GQLRVVK-EIHCYALKNFFRLDTLLLNAIVTVYGKCGDI 360
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+ +F+ + K+ ++WTA++ Y++ D ++ F M R G+ + +T + AC
Sbjct: 361 ASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRAC 420
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G Q+H V + G D D + N+++TMY + G + A K+F+ M R +SWN
Sbjct: 421 SATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWN 480
Query: 239 SLISGYVHNGEIEEAYRLF----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+LI+ + +G A +LF E M D ++ +++ S G + + E F M K
Sbjct: 481 ALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTK 540
Query: 295 DDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
++ +T ++ F ++ +A ++ M +P+QL ++L++ L+
Sbjct: 541 YNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAM---PCQPDQLVWEALLASCRVHGNLDL 597
Query: 350 GSQIHAHVVKMNME 363
G ++++ E
Sbjct: 598 GRMAAKKILEIKPE 611
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 11/288 (3%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR---KDV 327
++ + ++G+L + +F+ MP ++ V+W+ +I+ +A F MLR +D
Sbjct: 43 LLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGERD- 101
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
RPN T++++++ A G Q+HA VK+ ++ D S+ +LV +Y+KCG V ++R
Sbjct: 102 RPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWR 161
Query: 388 IFTNIDERNIVSYNSMISGFAQN---GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
F +R+++S+ SMI+ + G + A+ LF+KM + P TF +L +
Sbjct: 162 AFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDV 221
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
L+ G + + E P ++ + GR G + E L + +
Sbjct: 222 PELLPSGKQVHGCLVKM-GTEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFSRT-- 278
Query: 505 ALLGA-GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
+LL A R N++ ++ LM P + L + S +G+ R
Sbjct: 279 SLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLR 326
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H VK+ + + N+L+ Y G++ DA +F + RN+VS++ +I+ ++ G+
Sbjct: 24 VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGV 83
Query: 413 GEEALNLFRKMKDEGL--VPNQITFLSVLSAC 442
+AL+LF M G PN T ++++ C
Sbjct: 84 LGDALSLFAGMLRGGERDRPNSFTVAALVAGC 115
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 290/525 (55%), Gaps = 7/525 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y V AR++FD++PE+NV+ M+ Y+ + +G +F +M + +
Sbjct: 81 LMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPD 140
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + +AC G ++HG ++ G + +GN +++MYG+ GF+ EA V
Sbjct: 141 HYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 200
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFS--SKGNL 281
MS+RD VSWNSL++GY N ++A + M D + +++ S + N+
Sbjct: 201 EMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 260
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
++F M +K V+W +I ++ N EA + M P+ ++++SVL A
Sbjct: 261 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPAC 320
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
T+ L+ G +IH ++ + + ++ ++N+L+ +Y+KCG + A +F N+ R++VS+
Sbjct: 321 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWT 380
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MIS + +G G +A+ LF KM+D GLVP+ I F++ L+AC+H GL+EEG FK M
Sbjct: 381 AMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 440
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I P EH ACMVD+LGRAG + EA I M EP VWGALLGA R H N D+ L
Sbjct: 441 YKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLL 500
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA L +L P+ + YV+LS++Y+ G+ + +R K K ++K+PG S + + +H
Sbjct: 501 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 560
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
FL G +S EI L + K KE + P + +L +E +
Sbjct: 561 TFLVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEE 605
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 167/411 (40%), Gaps = 86/411 (20%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------------PARWRD 70
+ A ++F +P RN + MI +V G + E +++ M P +
Sbjct: 91 VATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKA 150
Query: 71 SVCS-------------------------NALISGYLKVGRCEEAARIFEAMVEKDVVAW 105
CS N L+S Y K G EA + + M +DVV+W
Sbjct: 151 CSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 210
Query: 106 GSMVDGYCKKGRVIEAREI-------------------------------------FDKM 128
S+V GY + R +A E+ F KM
Sbjct: 211 NSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKM 270
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+K++V+W M+ YMK + +L+ M G +++++T + ACG G
Sbjct: 271 GKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGK 330
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++HG + R +++L N++I MY + G +D A VF M RD VSW ++IS Y +G
Sbjct: 331 KIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSG 390
Query: 249 EIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----W 299
+A LF +M D +++ T + S G LE+ F +M + +T
Sbjct: 391 RGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL 450
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
++ + +EA+++ EM + PN+ ++L A + + G
Sbjct: 451 ACMVDLLGRAGKVKEAYKFIQEM---PMEPNERVWGALLGACRVHSNTDIG 498
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 163/403 (40%), Gaps = 35/403 (8%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLKVG 85
++F M ++ VS+ MI +++ M EA ELY M A D+V +++
Sbjct: 265 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTS 324
Query: 86 RCEEAARIFEAMVEKDVVA----WGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+I + K ++ +++D Y K G + AR++F+ M ++VV+WTAM+
Sbjct: 325 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMIS 384
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS-RFGFD 200
Y D LF M+ G+ +SI AC EG L++ +
Sbjct: 385 AYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 444
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISG-YVHNGE---IEEAYR 255
+ ++ + GR G + EA K M + + W +L+ VH+ + A +
Sbjct: 445 PRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADK 504
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM--------PEKDDVTWTAIISGFV 307
LF+ P + + + ++ G E+ + N+M P +V II F+
Sbjct: 505 LFQLAPEQSGY-YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFL 563
Query: 308 ----NNEQYEEAFRWFIEMLRKD-----VRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
++ Q E +R +++K V ++ L V T ++
Sbjct: 564 VGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFA 623
Query: 359 KMNMESDVSIQNSLVSLYSK---CGNVVDAYRIFTNIDERNIV 398
MN E + S N+ + + CG+ A ++ + I R I+
Sbjct: 624 LMNTEEEDS--NNAIRITKNLRICGDCHVAAKLISQITSREII 664
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H+ ++ ++ + S+ L+ Y+ +V A ++F I ERN++ N MI + NG
Sbjct: 62 VHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGF 121
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
E + +F M + P+ TF VL AC+ G
Sbjct: 122 YREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSG 155
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M ++ S+N MI + N + EA E+++ M +AVS +++
Sbjct: 270 MGKKSLVSWNVMIGVYMKNAMPV-EAVELYSGMEADGFEPDAVSITSVLPACGDTSALSL 328
Query: 57 AEEL--YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+++ Y+ + + NALI Y K G + A +FE M +DVV+W +M+ Y
Sbjct: 329 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGF 388
Query: 115 KGRVIEAREIFDKMPEKNVV 134
GR +A +F KM + +V
Sbjct: 389 SGRGCDAVALFSKMQDSGLV 408
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 197/643 (30%), Positives = 335/643 (52%), Gaps = 58/643 (9%)
Query: 21 CSIYE-AFEIFATMPMRNAVSYAAMITGF------VRRGMFYEAE----ELYVNMPARWR 69
C + E A ++F MP + VS+ MI+GF R MF+ + +Y N A
Sbjct: 157 CGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVS 216
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
+ ++L S L GR E + ++ ++ + S+++ Y K G + A IF+ +
Sbjct: 217 SILSCSSLQS--LTHGR-EIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSIL 273
Query: 130 EK-----NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
+K N V W M+ GY+ CF LF+ M G+ + T+ LF C
Sbjct: 274 DKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDI 333
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
G Q+HGL+ +FG +I + +++ MY + G M K+F + + W+++IS
Sbjct: 334 AFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNC 393
Query: 245 VHNGEIEEAYRLFERMPGKD-----------------------------------FVS-- 267
+G +A LF +D FVS
Sbjct: 394 AQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDV 453
Query: 268 --WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ ++ ++ ++ S ++F + +KD V+W A+ISG+ +E +EA + F +M +
Sbjct: 454 FVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLE 513
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++RPN +T++ +LS A + + ++H ++++ + S V + NSL++ Y+KCG++ +
Sbjct: 514 EIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSS 573
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
F + ERN VS+NS+I G + +E + LF KM G+ P+ +TF ++LSAC+H
Sbjct: 574 LYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHA 633
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
G V+EG YFKSM +N++P E Y CMVD+LGRAG L +A DLI +M P +WG+
Sbjct: 634 GRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGS 693
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLG+ + H + LA++ A H+ +L P S V+L++LY +GK R+G++VR + K +
Sbjct: 694 LLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGL 753
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+K PGCSWI + + H+F+AG +S EI +++++ K
Sbjct: 754 KKKPGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTEIK 796
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 219/470 (46%), Gaps = 65/470 (13%)
Query: 38 AVSYAA-MITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGYLKV--GRCE 88
+VS+A +I + G F +A +Y+ M +R C G V GR +
Sbjct: 72 SVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGR-Q 130
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
+ + V DV S++ Y K G V +A ++F+KMPE ++V+W M+ G+ K
Sbjct: 131 IHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMD 190
Query: 149 FEDGFDLFLSMR-RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
+ F SM G+ N + +C G ++HG+V + G D + L +
Sbjct: 191 YTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVS 250
Query: 208 SIITMYGRLGFMDEANKVF-SMMSK----RDAVSWNSLISGYVHNGEIEEAYRLFERM-- 260
S+I MY + G + A +F S++ K R+AV WN +ISGYV NG +A LF +M
Sbjct: 251 SLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMV 310
Query: 261 ----PGKDFVSWTTMITGFS--------------------------------------SK 278
P ++TM++ FS
Sbjct: 311 WGIKP-----DYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKC 365
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G++ +++F + + W+A+IS + +A F E +D + L +VL
Sbjct: 366 GDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVL 425
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A ++ +G QIH KM SDV + ++LV LY+KC ++ + ++F + ++++V
Sbjct: 426 RACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLV 485
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
S+N++ISG+AQ+ +EAL FR M+ E + PN +T +LS C H+ ++
Sbjct: 486 SWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVM 535
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 169/349 (48%), Gaps = 46/349 (13%)
Query: 149 FEDGFDLFLSMRRGGMAFNSIT-LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
F+D ++L M G+ L +A G +G Q+HG V + G D+ + N
Sbjct: 89 FDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVN 148
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------- 260
S++TMY + G +++A ++F M + D VSWN++ISG+ + + + F M
Sbjct: 149 SLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIY 208
Query: 261 -------------------------------PGKDFVSW--TTMITGFSSKGNLEKSIEL 287
G D + +++I + G+++ + +
Sbjct: 209 PNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENI 268
Query: 288 FNMMPEKDD-----VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
FN + +KD V W +ISG+V+N + +A FI+M+ ++P+ T+ S+ S +
Sbjct: 269 FNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCS 328
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ + G QIH + K +++++ ++ +L+ +Y KCG++ +IF N++ +++
Sbjct: 329 ESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSA 388
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+IS AQ+G +AL LF + K E + + ++VL AC+ + L EG
Sbjct: 389 VISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEG 437
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 113/197 (57%), Gaps = 7/197 (3%)
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT-LSSVLSASAATATLNQGSQIHAHVVKM 360
+I + + +++A +++ML V+ + ++ A + +G QIH HV+K+
Sbjct: 79 VIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKL 138
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ DVS+ NSL+++Y KCG V DA ++F + E ++VS+N+MISGF ++ +L F
Sbjct: 139 GVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFF 198
Query: 421 RKMKDE-GLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHY-ACMVDI 477
R M E G+ PN++ +S + +C+ + + G I+ +K+ ++E E+ + ++++
Sbjct: 199 RSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVE---EYLVSSLIEM 255
Query: 478 LGRAGSLAEAIDLINSM 494
+ GS+ A ++ NS+
Sbjct: 256 YMKCGSIKNAENIFNSI 272
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 105/257 (40%), Gaps = 40/257 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
++ + S+NA+I+ + C+ EA + F M + N V+ A +++ +
Sbjct: 479 LSQKDLVSWNALISGYAQDECA-DEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTL 537
Query: 57 AEEL--YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+E+ Y+ + SN+LI+ Y K G + FE M E++ V+W S++ G
Sbjct: 538 CKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGM 597
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
R E +FDKM VA G+ + +T T +
Sbjct: 598 HSRTDEMIVLFDKM-----VA--------------------------SGIKPDHVTFTAI 626
Query: 175 FEACGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA-NKVFSMMSKR 232
AC R EG + +V F + ++ + GR G +++A + + +M
Sbjct: 627 LSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTP 686
Query: 233 DAVSWNSLISGYVHNGE 249
D W SL+ ++G+
Sbjct: 687 DDRIWGSLLGSCKNHGD 703
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 194/655 (29%), Positives = 339/655 (51%), Gaps = 83/655 (12%)
Query: 42 AAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM---- 97
+A+I + G+ +A + + MP WRD V N ++ GY+K G A R+F M
Sbjct: 180 SALIKMYSDAGLLRDARDAFDGMP--WRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSG 237
Query: 98 -----------------------------------VEKDVVAWGSMVDGYCKKGRVIEAR 122
+E++V +++ Y K + +A
Sbjct: 238 CEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAW 297
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+F+ +P ++V W M+ G ++ ++ LF M R G +S+TL L A
Sbjct: 298 RLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLN 357
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
++G +VHG + R D L ++++ +Y + + A ++ D V +++IS
Sbjct: 358 GLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVIS 417
Query: 243 GYVHNGEIEEAYRLFERM----------------------------------------PG 262
GYV NG E+A ++F + G
Sbjct: 418 GYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEG 477
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K +V + ++ ++ G L+ S +F+ M KD+VTW ++IS F N + +EA F +M
Sbjct: 478 KCYVE-SALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQM 536
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ ++ N +T+SS LSA A+ + G +IH ++K +++D+ +++L+ +Y+KCGN+
Sbjct: 537 CMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNM 596
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A R+F + ++N VS+NS+IS + +GL +E+++ +M++EG P+ +TFL+++SAC
Sbjct: 597 ELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISAC 656
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
H GLVEEG F+ M Y I P EH+ACMVD+ R+G L +AI I M F+P G+
Sbjct: 657 AHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGI 716
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WGALL A R H N++LA +A+Q L +L+P ++ YV++S++ +V G+ ++VR K
Sbjct: 717 WGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKD 776
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHD 616
+I K PG SW+ + + HLF+A KS + ++I +L+ + + +E + P+ D
Sbjct: 777 NKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVPRPD 831
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 227/470 (48%), Gaps = 54/470 (11%)
Query: 25 EAFEIFATMPMRNAVSYAA---MITGFVRRGMFYEAEELYVNM---------PARWRDSV 72
+A +F+ +P A S +I GF G A YV M A V
Sbjct: 88 DAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYV 147
Query: 73 CSNALISGYLKVGR-CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
+ G + +GR AR + DV +++ Y G + +AR+ FD MP +
Sbjct: 148 VKSCAALGAVSLGRLVHRTAR--ATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWR 205
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+ V W M+DGY+K LF +MR G N TL C GVQ+H
Sbjct: 206 DCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLH 265
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
L + G + ++ + N++++MY + +D+A ++F ++ + D V+WN +ISG V NG ++
Sbjct: 266 SLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLD 325
Query: 252 EAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIE--------------------- 286
EA LF M D V+ +++ + L++ E
Sbjct: 326 EALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALV 385
Query: 287 --------------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
L++ D V + +ISG+V N E+A + F +L + ++PN +
Sbjct: 386 DIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAV 445
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T++SVL A A+ + L G +IH +V++ E ++++L+ +Y+KCG + ++ IF+ +
Sbjct: 446 TVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKM 505
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
++ V++NSMIS F+QNG +EAL+LFR+M EG+ N +T S LSAC
Sbjct: 506 SLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSAC 555
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M+ + ++N+MI++ + N EA ++F M M N V+ ++ ++ Y
Sbjct: 505 MSLKDEVTWNSMISSF-SQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYY 563
Query: 57 AEELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+E++ + P + D +ALI Y K G E A R+FE M +K+ V+W S++ Y
Sbjct: 564 GKEIHGVIIKGPIK-ADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYG 622
Query: 114 KKGRVIEAREIFDKMPEK----NVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
G V E+ +M E+ + V + A++ E+G LF M +
Sbjct: 623 AHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTK 674
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 298/535 (55%), Gaps = 30/535 (5%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+N+LI Y ++G + R F+ + KD V+W ++ G K G + +AR + + P ++V
Sbjct: 146 ANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDV 205
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++WT+++ Y + D ++ D F +M G+A + +T+ + AC + G +H L
Sbjct: 206 ISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSL 265
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V G L ++I MY + G A +VF DAV
Sbjct: 266 VKEKGMSMSENLVVALIDMYAKCGDFGHAREVF------DAVGR---------------- 303
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
G+ SW +I G+ G+++ + LF+ M +D +T+ ++I+G++++ Q
Sbjct: 304 --------GRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLR 355
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EA F+ M R D+R + T+ S+LSA A+ L QG +HA + +E+D+ I +L+
Sbjct: 356 EALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALL 415
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y KCG V +A +F + +R++ ++ +MI+G A NG+G+ L F +M+ +G PN +
Sbjct: 416 DMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPV 475
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
++++VL+AC+H L+ EG +YF M+ LYNI P EHY CM+D+LGR+G L EA+DL+ +
Sbjct: 476 SYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKT 535
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
M +P +W ++L A R H +DLA+ AA+HL+++EPD YV L ++ K D
Sbjct: 536 MPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDA 595
Query: 554 NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+++RM + ++++K+ G S + + +VH F+ KS + EI L+ IS K
Sbjct: 596 SKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLK 650
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 142/583 (24%), Positives = 273/583 (46%), Gaps = 46/583 (7%)
Query: 32 TMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-WRDSVCSNALISGYLKVGRCEE- 89
TM +R+ S MITGF+R G+ A +Y M A R++ + + I G +
Sbjct: 756 TMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQL 815
Query: 90 AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
R+ + + ++V+ Y + +F ++P +N ++ G +
Sbjct: 816 HGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGNLKLT 875
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE-GVQVHGLVSRFG-FDYDIILGN 207
E+ FL MRR + N ++ + C + + E G Q+HG+V + G +I L N
Sbjct: 876 EELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSN 935
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA-YRLFE-----RMP 261
S++ +Y +G + K + + D +SWNS++S Y G ++EA Y L + +MP
Sbjct: 936 SLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMP 995
Query: 262 G-KDFVS----------W-----------------------TTMITGFSSKGNLEKSIEL 287
+ FVS W TT+I + + S+ +
Sbjct: 996 SIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAI 1055
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA--ATA 345
FN +P ++I+ + ++ A M+ + V P+ +T S+ + A + A+
Sbjct: 1056 FNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASP 1115
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+L +H+ +VK+ E D+++ +SL++ Y+ G + ++ IF + + N++ + ++IS
Sbjct: 1116 SLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIIS 1175
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
A+ G G A+ LF +M GL P+ +TFL ++ C+ G+ EEG + + M+ ++
Sbjct: 1176 ACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELD 1235
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
P H+ACMV++L R G + EA++++ W +LL + + H L K AA
Sbjct: 1236 PDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANM 1295
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
L+++ + +S+ ++ IG + R++ +K ++KS
Sbjct: 1296 LIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKKS 1338
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 160/375 (42%), Gaps = 82/375 (21%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG---------FDLFLSMRRGGMAFNSITL 171
A +FD+MP A T + D ++ CF G F LF MRR + + T
Sbjct: 56 ALHLFDRMP-----ASTFLFDTALRA-CFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTF 109
Query: 172 TILFEACGRFFRYRE--GVQVHGLVSRFGFDYDI-ILGNSIITMYGRLGFMDEANKVFSM 228
LF+ C R R +H R + NS+I MY LG + + F
Sbjct: 110 HFLFK-CSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDE 168
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
+ +DAVSW +ISG G + +A L + P +D +SWT++I +S +++++ F
Sbjct: 169 IPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCF 228
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
ML + + P+ +T+ VLSA + L
Sbjct: 229 K-------------------------------NMLSEGIAPDDVTVIGVLSACSQLKDLE 257
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN----------------------VVDAY 386
G +H+ V + M ++ +L+ +Y+KCG+ ++D Y
Sbjct: 258 LGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGY 317
Query: 387 ----------RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+F ++ R+I+++NSMI+G+ +G EAL LF M+ L + T +
Sbjct: 318 CKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVV 377
Query: 437 SVLSACNHVGLVEEG 451
S+LSAC +G + +G
Sbjct: 378 SLLSACASLGALPQG 392
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 121/316 (38%), Gaps = 95/316 (30%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
R S+NA+I + + A +F M +R+ +++ +MITG++ G EA L++N
Sbjct: 305 RRPQSWNAIIDGYCKHG-HVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMN 363
Query: 64 MPARWRD------------SVCSN---------------------------ALISGYLKV 84
M R D S C++ AL+ Y+K
Sbjct: 364 M--RRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKC 421
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
GR EA +F+ M ++DV AW +M+ G +A+ M
Sbjct: 422 GRVNEATIVFQRMGKRDVHAWTAMIAG----------------------LAFNGMGKA-- 457
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
G + F MR G N ++ + AC EG R FD I
Sbjct: 458 -------GLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEG--------RLYFDEMRI 502
Query: 205 LGN---------SIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEIE--- 251
L N +I + GR G +DEA + V +M + ++V W S++S + I+
Sbjct: 503 LYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQ 562
Query: 252 -EAYRLFERMPGKDFV 266
A L + P +D V
Sbjct: 563 CAAEHLLKIEPDEDAV 578
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 185/584 (31%), Positives = 321/584 (54%), Gaps = 40/584 (6%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG-------------------- 116
L+S Y G +E R+F+ M +K+V W MV Y K G
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 199
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
R A E+FDK+ +++V++W +M+ GY+ E G ++ M G+ + T+ +
Sbjct: 200 RPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
C G VH L + F+ I N+++ MY + G +D A +VF M +R+ VS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP 292
W S+I+GY +G + A L ++M + D V+ T+++ + G+L+ ++ + +
Sbjct: 320 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 379
Query: 293 EKDDVT----WTAIISGFVNNEQYEEAFRWFIEMLRKDV----------RPNQLTLSSVL 338
+ + A++ + E A F M+ KD+ +P+ T++ +L
Sbjct: 380 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACIL 439
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A A+ + L +G +IH ++++ SD + N+LV LY KCG + A +F I +++V
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 499
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+ MI+G+ +G G EA+ F +M+D G+ P++++F+S+L AC+H GL+E+G+ +F M
Sbjct: 500 SWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM 559
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
K +NIEP EHYACMVD+L R G+L++A I ++ P +WGALL R + +++L
Sbjct: 560 KNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIEL 619
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
A+ A+ + ELEP++ YV+L+++Y+ K+ + R+R K K +RK+PGCSWI +K
Sbjct: 620 AEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKG 679
Query: 579 KVHLFLAGRKSCL-DLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
+V+LF++G S K+IE L+ + + KE + PK ++L+
Sbjct: 680 RVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALI 723
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 203/427 (47%), Gaps = 44/427 (10%)
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ V + A + + ++ E+ +L ++ + T + + C +G +
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELVCMCQKS--ELETKTYGSVLQLCAGLKSLTDGKK 120
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VH ++ D LG +++ Y G + E +VF M K++ WN ++S Y G+
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+E+ LF+ M K G K E + ELF+ + ++D ++W ++ISG+V+N
Sbjct: 181 FKESICLFKIMVEK----------GIEGK-RPESASELFDKLCDRDVISWNSMISGYVSN 229
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
E + +M+ + + T+ SVL A + TL+ G +H+ +K + E ++
Sbjct: 230 GLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N+L+ +YSKCG++ A R+F + ERN+VS+ SMI+G+ ++G + A+ L ++M+ EG+
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVK 349
Query: 430 PNQITFLSVLSACNHVGLVEEG---FIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSL 484
+ + S+L AC G ++ G Y K+ N+ + C ++D+ + GS+
Sbjct: 350 LDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNL------FVCNALMDMYAKCGSM 403
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
A + ++M + W ++G EL+PDS T +L
Sbjct: 404 EGANSVFSTMVVKDIIS-WNTMVG-------------------ELKPDSRTMACILPACA 443
Query: 545 SVIGKKR 551
S+ +R
Sbjct: 444 SLSALER 450
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 207/477 (43%), Gaps = 82/477 (17%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALI 78
A E+F + R+ +S+ +MI+G+V G+ +Y M D SV
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
SG L +G+ + I ++ E+ + +++D Y K G + A +F+KM E+NVV+WT+
Sbjct: 264 SGTLSLGKAVHSLAI-KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322
Query: 139 MVDGYMKVDCFEDGFDLFL-SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
M+ GY + D + DG + L M + G+ + + +T + AC R G VH +
Sbjct: 323 MIAGYTR-DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS------------------ 239
++ + N+++ MY + G M+ AN VFS M +D +SWN+
Sbjct: 382 NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPA 441
Query: 240 -------------------------------LISGYVHNGEIEEAYRLFERMPGKDFVSW 268
L+ YV G + A LF+ +P KD VSW
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSW 501
Query: 269 TTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
T MI G+ G ++I FN M E D+V++ +I+ ++ E+ +R+F M
Sbjct: 502 TVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKN 561
Query: 325 K-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
++ P + ++ + T L S+ + + + + D +I +L+ CG +
Sbjct: 562 DFNIEPKLEHYACMVDLLSRTGNL---SKAYKFIETLPIAPDATIWGALL-----CGCRI 613
Query: 384 ---------DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
A R+F ++ N Y + + +A+ EE + K+ +GL N
Sbjct: 614 YHDIELAEKVAERVF-ELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKN 669
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 288/512 (56%), Gaps = 31/512 (6%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+ +L++ Y K G A +F+ M K++ W +++ Y + G+ A F+KMP++++
Sbjct: 180 ATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI 239
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
V+W +M+ GY + + +F M + ++ TL + AC + G Q+H
Sbjct: 240 VSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHA 299
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ R + +GN++I+MY + G ++ A + HN
Sbjct: 300 YILRAETETSGAVGNALISMYAKSGGVEIARLIVE------------------HN----- 336
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
R + +++T+++ G++ GN++ + E+FN + ++D V WTA+I G+V N +
Sbjct: 337 ------RTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLW 390
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
+A F M+ + PN TL+++LS S++ L G QIHA +K S S+ N+L
Sbjct: 391 NDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNAL 450
Query: 373 VSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+++Y+K GN+ A R+F + ++ IVS+ SMI AQ+GLG+EA+NLF +M G+ P+
Sbjct: 451 IAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPD 510
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
IT++ VLSAC HVGLVE+G Y+ M ++ IEP HYACM+D+ GRAG L EA I
Sbjct: 511 HITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFI 570
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
SM EP WG+LL + + H N DLAK+AA+ L+ ++P ++ Y+ L+++YS GK
Sbjct: 571 ESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWE 630
Query: 552 DGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ + R K + +RK G SWI +K++VH F
Sbjct: 631 NAAQTRKLMKDRGVRKEKGISWIHIKNEVHAF 662
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 204/411 (49%), Gaps = 65/411 (15%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N L++ Y K G A +F+ M K +W +++ GY K+G +R + +MP+ + V
Sbjct: 49 NNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPV 108
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WTA++ GY + F++ +F M + + T++ + +C G ++H V
Sbjct: 109 SWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFV 168
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G + + S++ MY + G A VF M+ ++ +WN+LIS Y+ +G+ E A
Sbjct: 169 VKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAA 228
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
FE+MP +D VSW +MI+G+S +G +N+ E
Sbjct: 229 SQFEKMPDRDIVSWNSMISGYSQQG--------YNL-----------------------E 257
Query: 315 AFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A F +ML + ++P+ TL+S+LSA A LN G QIHA++++ E+ ++ N+L+
Sbjct: 258 ALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALI 317
Query: 374 SL---------------------------------YSKCGNVVDAYRIFTNIDERNIVSY 400
S+ Y+K GNV A IF + +R++V++
Sbjct: 318 SMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAW 377
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+MI G+ QNGL +AL LFR M +EG PN T ++LS + + ++E G
Sbjct: 378 TAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHG 428
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 210/451 (46%), Gaps = 63/451 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEI----FATMPMRNAVSYAAMITGFVRRGMFYE 56
M + +++NA+I+ + + FE+ F MP R+ VS+ +MI+G+ ++G E
Sbjct: 203 MTVKNISTWNALISLYMQSG-----QFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLE 257
Query: 57 AEELY---VNMPARWRD--------SVCSN---------------------------ALI 78
A ++ +N P+ D S C+N ALI
Sbjct: 258 ALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALI 317
Query: 79 SGYLKVGRCEEAARIFEA--MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
S Y K G E A I E +++A+ S++DGY K G V AREIF+K+ +++VVAW
Sbjct: 318 SMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAW 377
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
TAM+ GY++ + D +LF M G NS TL + G Q+H +
Sbjct: 378 TAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIK 437
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYR 255
G + N++I MY + G ++ A +VF + + K++ VSW S+I +G +EA
Sbjct: 438 AGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAIN 497
Query: 256 LFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGF 306
LFERM D +++ +++ + G +E+ + +NMM E ++ + +I +
Sbjct: 498 LFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLY 557
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+EA+ FIE + + P+ + S+L AS +++ A + + +
Sbjct: 558 GRAGLLQEAY-LFIESM--PIEPDNIAWGSLL-ASCKIHKNADLAKVAAERLLLIDPGNS 613
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+L ++YS CG +A + + +R +
Sbjct: 614 GAYLALANVYSACGKWENAAQTRKLMKDRGV 644
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 281/535 (52%), Gaps = 69/535 (12%)
Query: 124 IFDKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
IF+ +P +AW +++ Y F F+ M G + + ++C
Sbjct: 61 IFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMK 120
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN------------------- 223
R G VHG + R G +D+ N+++ MY + ++E N
Sbjct: 121 DLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKE 180
Query: 224 ----------KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD--------- 264
KVF MM KRD VSWN++ISG NG E+A + M D
Sbjct: 181 KESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLS 240
Query: 265 -----FVSWTTMITG-------------------------FSSKGNLEKSIELFNMMPEK 294
F + ++ G ++ ++ S +F M+P+
Sbjct: 241 SVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQH 300
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D ++W +II+G V N ++E ++F +ML ++PN ++ SS++ A A TL+ G Q+H
Sbjct: 301 DGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLH 360
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
++++ + +V I ++LV +Y+KCGN+ A IF ++ ++VS+ +MI G+A +G
Sbjct: 361 GYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAY 420
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
+A++LF++M+ EG+ PN + F++VL+AC+H GLV+E + YF SM Y I PG EHYA +
Sbjct: 421 DAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAV 480
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
D+LGR G L EA + I+ M EP VW LL A R H N++LA+ ++ L ++P +
Sbjct: 481 ADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNI 540
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
YV+LS++YS G+ +D ++R+ + K ++K P CSWI +K+KVH F+AG KS
Sbjct: 541 GAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKS 595
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 183/427 (42%), Gaps = 89/427 (20%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMR-NAVSYAAMITGFVRRGMFYEAEELYVNM 64
S S + I ++ +N ++++ IF ++P +++ ++I + G+F + ++ M
Sbjct: 38 SPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQM 97
Query: 65 PA-----------------------RWRDSV--------------CSNALISGYLKVGRC 87
A R+ +SV NAL++ Y K
Sbjct: 98 LASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSL 157
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGR----VIEAREIFDKMPEKNVVAWTAMVDGY 143
EE K V G D Y KK + + R++F+ MP++++V+W ++ G
Sbjct: 158 EEVN------TYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGN 211
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
+ ED + M + +S TL+ + + +G ++HG R G+D D+
Sbjct: 212 AQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADV 271
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--- 260
+G+S+I MY + +D++ +VF M+ + D +SWNS+I+G V NG +E + F++M
Sbjct: 272 FIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIA 331
Query: 261 -------------------------------------PGKDFVSWTTMITGFSSKGNLEK 283
G F++ + ++ ++ GN+
Sbjct: 332 KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIA-SALVDMYAKCGNIRT 390
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ +F+ M D V+WTA+I G+ + +A F M + V+PN + +VL+A +
Sbjct: 391 ARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSH 450
Query: 344 TATLNQG 350
+++
Sbjct: 451 AGLVDEA 457
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 177/376 (47%), Gaps = 19/376 (5%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-PARWR-DSVCSNALISGYLKVG 85
++F MP R+ VS+ +I+G + GM +A + M A R DS ++++ + +
Sbjct: 191 KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYV 250
Query: 86 RCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+ I + + DV S++D Y K RV ++ +F +P+ + ++W +++
Sbjct: 251 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 310
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G ++ F++G F M + N ++ + + AC G Q+HG + R FD
Sbjct: 311 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 370
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++ + ++++ MY + G + A +F M D VSW ++I GY +G +A LF+RM
Sbjct: 371 NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME 430
Query: 262 ----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQY 312
++V++ ++T S G ++++ + FN M + + + A+ +
Sbjct: 431 VEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRL 490
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EEA+ + +M + P S++L+A + ++ + ++ + ++ L
Sbjct: 491 EEAYEFISDM---HIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQ-NIGAYVLL 546
Query: 373 VSLYSKCGNVVDAYRI 388
++YS G DA ++
Sbjct: 547 SNIYSAAGRWKDARKL 562
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 293/535 (54%), Gaps = 44/535 (8%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ D ++VD Y K V AR++FD+MP+++VV+W AMV Y + + L
Sbjct: 78 QADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALSLLKE 137
Query: 159 MRRGGMAFNSIT-LTIL--FEACGRFFRYREGVQVHGLVSRFGFDY-DIILGNSIITMYG 214
M G + T ++IL + F + G +H + + G Y ++ L NS++ MY
Sbjct: 138 MWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYV 197
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTT 270
+ MDEA KVF +M ++ +SW ++I GYV G EAY LF +M G DFV +
Sbjct: 198 QFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLN 257
Query: 271 MITG-----------------------------------FSSKGNLEKSIELFNMMPEKD 295
+I+G ++ GNL + +F+++ EK
Sbjct: 258 LISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKS 317
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
++WT++I+G+V+ EA F M+R D+RPN TL++V+SA A +L+ G +I
Sbjct: 318 MLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEE 377
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
++ +ESD +Q SL+ +YSKCG++V A +F + ++++ + SMI+ +A +G+G E
Sbjct: 378 YIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNE 437
Query: 416 ALNLFRKMKD-EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
A++LF KM EG++P+ I + SV AC+H GLVEEG YFKSM+ + I P EH C+
Sbjct: 438 AISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCL 497
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
+D+LGR G L A++ I M + VWG LL A R H N++L +LA L++ P S+
Sbjct: 498 IDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATVRLLDSSPGSS 557
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
YV++++LY+ +GK ++ + +R K + K G S + + D H F G +S
Sbjct: 558 GSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQVEVTDTYHTFAVGNQS 612
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 204/431 (47%), Gaps = 55/431 (12%)
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
+++ W M+ F +++ SM G+ N++T +L +AC + G +
Sbjct: 9 RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTML 68
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG V + GF D + +++ MY + + A +VF M +R VSWN+++S Y +
Sbjct: 69 HGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSM 128
Query: 251 EEAYRLFERMPGKDF----VSWTTMITGFSSKGNLE-----KSI---------------- 285
++A L + M F ++ ++++G+S+ + E KSI
Sbjct: 129 DQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSL 188
Query: 286 ------------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
++F++M EK ++WT +I G+V EA+ F +M + V
Sbjct: 189 ANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSV 248
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+ + +++S L S +H+ V+K ++N L+++Y+KCGN+ A R
Sbjct: 249 GIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARR 308
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
IF I E++++S+ SMI+G+ G EAL+LFR+M + PN T +V+SAC +G
Sbjct: 309 IFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGS 368
Query: 448 VEEG-----FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+ G +I+ +++ ++ ++ + + GS+ +A ++ +T + V
Sbjct: 369 LSIGQEIEEYIFLNGLESDQQVQTS------LIHMYSKCGSIVKAREVFERVT-DKDLTV 421
Query: 503 WGALLGAGRTH 513
W +++ + H
Sbjct: 422 WTSMINSYAIH 432
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 179/390 (45%), Gaps = 53/390 (13%)
Query: 14 TALIN--NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TAL++ + CS + A ++F MP R+ VS+ AM++ + RR +A L M +
Sbjct: 85 TALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFE 144
Query: 71 SVCSN--ALISGYLK--------VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
S +++SGY +G+ I +V +V S++ Y + + E
Sbjct: 145 PTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDE 204
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD M EK++++WT M+ GY+K+ + + LF M+ + + + L C +
Sbjct: 205 ARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQ 264
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
VH LV + G + + N +ITMY + G + A ++F ++ ++ +SW S+
Sbjct: 265 VRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSM 324
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDF----------VS----------------------- 267
I+GYVH G EA LF RM D VS
Sbjct: 325 IAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGL 384
Query: 268 ------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
T++I +S G++ K+ E+F + +KD WT++I+ + + EA F +
Sbjct: 385 ESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHK 444
Query: 322 MLRKD-VRPNQLTLSSVLSASAATATLNQG 350
M + + P+ + +SV A + + + +G
Sbjct: 445 MTTAEGIMPDAIVYTSVFLACSHSGLVEEG 474
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 109/282 (38%), Gaps = 43/282 (15%)
Query: 25 EAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEEL--YVNMPARWRDSVCSNALI 78
EA ++F M N + A +++ G +E+ Y+ + D +LI
Sbjct: 336 EALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLI 395
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
Y K G +A +FE + +KD+ W SM++ Y G EA +F KM
Sbjct: 396 HMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAE------ 449
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR-F 197
G+ ++I T +F AC EG++ + + F
Sbjct: 450 ------------------------GIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDF 485
Query: 198 GFDYDIILGNSIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEIE----E 252
G + +I + GR+G +D A N + M A W L+S +G +E
Sbjct: 486 GITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELA 545
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
RL + PG S+ M ++S G +++ + N M K
Sbjct: 546 TVRLLDSSPGSSG-SYVLMANLYTSLGKWKEAHMMRNSMDGK 586
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 290/507 (57%), Gaps = 2/507 (0%)
Query: 100 KDVVAWGSMVDGYCKKGRVIE-AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
KD V+ Y R I+ A +F + + +WT M+ G+++ E + +
Sbjct: 57 KDTFIATKTVESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGL 116
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
MR+ G+ N T + +A G Y+EG VHG + + GF YD+ N++I MY + G
Sbjct: 117 MRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGS 176
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
+ +A+ +F M + V+WN++I+G G+ E A RLF MP ++ SW ++ G+S
Sbjct: 177 ITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKL 236
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G+++ + LF++MPE+D V+W ++IS +V N + EA F EM+ V + + ++S+L
Sbjct: 237 GHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIITSIL 296
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA A L+ G IHA++ + + +DV + +LV +Y+KCG + A+ +F + +N+
Sbjct: 297 SACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLC 356
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N+M+SG A +G G AL LF++M+ G+ PN ITF++VLSAC+H+G VEEG+ F M
Sbjct: 357 SWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQM 416
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+NI P EHY CMVDIL R G + EA ++I +M EP +WGALL A + H ++
Sbjct: 417 DKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNV 476
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR-MKKKLKRIRKSPGCSWIILK 577
+ ++ +L + YV+LS++++ + + + R M K++ +K PG S I L
Sbjct: 477 GEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSIELD 536
Query: 578 DKVHLFLAGRKSCLDLKEIEVTLQTIS 604
VH F A + +E+ ++ ++
Sbjct: 537 SVVHDFFAEDRLHSKWREVSTVIERLN 563
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 168/331 (50%), Gaps = 16/331 (4%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV 102
A+I +++ G +A L+ MP + V N +I+G G E A R+F M E++V
Sbjct: 166 ALIHMYLKCGSITDAHLLFDEMPNH--NVVTWNTMITGCFGCGDTERARRLFGEMPERNV 223
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
+W ++V GY K G V AR +FD MPE++VV+W +M+ Y++ + +LF M
Sbjct: 224 GSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLA 283
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G++ +SI +T + AC + G +H + R D+ L +++ MY + G +D A
Sbjct: 284 GVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTA 343
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSK 278
VF+ M +++ SWN+++SG +G A LF++M G + +++ +++ S
Sbjct: 344 FGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHI 403
Query: 279 GNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQL 332
G++E+ + FN M ++ ++T + ++ EA EM+R + PN +
Sbjct: 404 GSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEA----KEMIRTMPLEPNVV 459
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNME 363
++L+A N G + ++ K+ E
Sbjct: 460 IWGALLNACKVHGYTNVGEDVVGYIQKLVSE 490
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 146/339 (43%), Gaps = 25/339 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+NA++ + + A +F MP R+ VS+ +MI+ +V+ G EA EL
Sbjct: 218 MPERNVGSWNAVVGGY-SKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALEL 276
Query: 61 YVNM--PARWRDSVCSNALISGYLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCK 114
+ M DS+ +++S ++G + I M + DV ++VD Y K
Sbjct: 277 FKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAK 336
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + A +F+ MP KN+ +W AM+ G +LF M G+ N IT +
Sbjct: 337 CGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAV 396
Query: 175 FEACGRFFRYREG-VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KR 232
AC EG + + + F + ++ + R G ++EA ++ M +
Sbjct: 397 LSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEP 456
Query: 233 DAVSWNSL-----ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN---LEKS 284
+ V W +L + GY + GE Y +++ +D + + F++K +EK+
Sbjct: 457 NVVIWGALLNACKVHGYTNVGEDVVGY--IQKLVSEDGGCYVLLSNIFAAKSQWNEVEKT 514
Query: 285 IELFNMM------PEKDDVTWTAIISGFVNNEQYEEAFR 317
++ M P + +++ F ++ +R
Sbjct: 515 RKMMKQMGVEKKIPGYSSIELDSVVHDFFAEDRLHSKWR 553
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 196/606 (32%), Positives = 305/606 (50%), Gaps = 51/606 (8%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN------A 76
I A ++F MP + +SY +I +VR G++++A +++ M + V A
Sbjct: 65 ITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVA 124
Query: 77 LISGYLKVGRCEEA--ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+G LK + RI + +D +++ Y G+V AR++FD M ++V+
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W M+ GY + D +F M + + T+ + CG G VH LV
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
I + N+++ MY + G MDEA VF M +RD ++W +I+GY +G++E A
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 255 RLFERMP--------------------------GKDFVSW-------------TTMITGF 275
L M GK W T++I+ +
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ ++ +F+ + W+AII+G V NE +A F M R+DV PN TL+
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L A AA A L Q IH ++ K S + LV +YSKCG + A++IF I E+
Sbjct: 425 SLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 396 ----NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++V + ++ISG+ +G G AL +F +M G+ PN+ITF S L+AC+H GLVEEG
Sbjct: 485 HKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
F+ M Y HY C+VD+LGRAG L EA +LI ++ FEP VWGALL A
Sbjct: 545 LTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACV 604
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
TH N+ L ++AA L ELEP++ YV+L+++Y+ +G+ +D +VR + +RK PG
Sbjct: 605 THENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGH 664
Query: 572 SWIILK 577
S I ++
Sbjct: 665 STIEIR 670
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 198/468 (42%), Gaps = 121/468 (25%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY---VN--- 63
NA++ A+ N + A ++F M R+ +S+ MI+G+ R G +A ++ VN
Sbjct: 156 NALL-AMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV 214
Query: 64 ----------MPA--------------------RWRDSV-CSNALISGYLKVGRCEEAAR 92
+P R D + NAL++ YLK GR +EA
Sbjct: 215 DLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARF 274
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
+F+ M +DV+ W M++GY + G V E+
Sbjct: 275 VFDRMERRDVITWTCMINGYTEDGDV-------------------------------ENA 303
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
+L M+ G+ N++T+ L CG + +G +HG R DII+ S+I+M
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISM 363
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD-------- 264
Y + +D +VFS SK W+++I+G V N + +A LF+RM +D
Sbjct: 364 YAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 265 ---------------------------FVSWTTMITG----FSSKGNLEKSIELFNMMPE 293
F+S TG +S G LE + ++FN + E
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQE 483
Query: 294 ----KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
KD V W A+ISG+ + A + F+EM+R V PN++T +S L+A + + + +
Sbjct: 484 KHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEE 543
Query: 350 GSQIHAHVVKMNMESDVSIQNS-----LVSLYSKCGNVVDAYRIFTNI 392
G + + +E ++ S +V L + G + +AY + T I
Sbjct: 544 GLTL----FRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTI 587
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------ 260
+++ Y G + A K+F M + +S+N +I YV G +A +F RM
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 261 ---------------------------PGKDFVSW--------TTMITGFSSKGNLEKSI 285
G+ SW ++ + + G +E +
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
++F++M +D ++W +ISG+ N +A F M+ + V + T+ S+L
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK 232
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
L G +H V + + + ++N+LV++Y KCG + +A +F ++ R+++++ MI+
Sbjct: 233 DLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
G+ ++G E AL L R M+ EG+ PN +T S++S C V +G
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L+ AAT ++++ +H HV+ S I ++L Y+ CG++ A ++F + +
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHITYARKLFEEMPQS 78
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL--VPNQITFLSVLSACNH-----VGLV 448
+++SYN +I + + GL +A+++F +M EG+ VP+ T+ V A +GLV
Sbjct: 79 SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLV 138
Query: 449 EEGFI 453
G I
Sbjct: 139 VHGRI 143
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 276/461 (59%), Gaps = 3/461 (0%)
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN--SITLTILFEACGRFFRYREGVQ 189
N+ A+ A++ + + + + F + A N T T + +AC + EG +
Sbjct: 89 NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VH V+++G + ++ + NS++ +Y ++G A K+F M RD VSWN+LISGY +G
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+++A +F+ M K+ VSW+TMI+G++ GNLE++ +LF MP ++ V+W A+I+G+ N
Sbjct: 209 VDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQN 268
Query: 310 EQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
E+Y +A F +M + + PN +TL SVLSA A L+ G IH + + +E + +
Sbjct: 269 EKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFL 328
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
N+L +Y+KCG V++A +F + ER+++S++ +I G A G EA N F +M ++GL
Sbjct: 329 GNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGL 388
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
PN I+F+ +L+AC H GLV++G YF M +Y I P EHY C+VD+L RAG L +A
Sbjct: 389 EPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAE 448
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
LINSM +P VWGALLG R + + + + ++EL+ + + V L+++Y+ +G
Sbjct: 449 SLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMG 508
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ D R++ + + K+PGCSWI + + V+ F G S
Sbjct: 509 RLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSS 549
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 142/256 (55%), Gaps = 7/256 (2%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV 102
+++ + + G A++L+ M R D V N LISGY G ++A +F+ M+EK++
Sbjct: 167 SLVDLYFKVGCNCIAQKLFDEMVVR--DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNL 224
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR- 161
V+W +M+ GY + G + EAR++F+ MP +NVV+W AM+ GY + + + D +LF M+
Sbjct: 225 VSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHE 284
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
GG+A N +TL + AC G +H + R + + LGN++ MY + G + E
Sbjct: 285 GGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLE 344
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSS 277
A VF M +RD +SW+ +I G G EA+ F M +S+ ++T +
Sbjct: 345 AKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTH 404
Query: 278 KGNLEKSIELFNMMPE 293
G ++K +E F+MMP+
Sbjct: 405 AGLVDKGLEYFDMMPQ 420
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 192/634 (30%), Positives = 320/634 (50%), Gaps = 50/634 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW---RDSVCSNALIS 79
+ +A ++F MP +N V++ ++++G+ R G A ++ +M D C+ AL++
Sbjct: 64 LADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVA 123
Query: 80 ----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G L+ G + + A D +++ Y + G + A+E+FD+M +VV
Sbjct: 124 CADLGALRAGE-QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVG 182
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LV 194
+T+++ + + FE + + M + G+ N T+T + AC R G Q+HG L+
Sbjct: 183 YTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLI 238
Query: 195 SRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G + ++I Y R G A VF + ++ VSW S++ Y+ +G +EEA
Sbjct: 239 KKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEA 298
Query: 254 YRLFERM------PGK------------------------------DFVSWTTMITGFSS 277
++F M P + D +++ +
Sbjct: 299 LQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGR 358
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
G +E+ + N + D V+WT IS N E+A +M + PN SSV
Sbjct: 359 TGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSV 418
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
LS+ A A+L+QG Q H +K+ +S++ N+L+++YSKCG + A F + ++
Sbjct: 419 LSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDV 478
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
S+NS+I G AQ+G +AL +F KM+ G+ P+ TFL VL CNH G+VEEG ++F+
Sbjct: 479 TSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRL 538
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
M Y+ P P HYACM+D+LGR G EA+ +IN M FEP +W LL + + H NLD
Sbjct: 539 MIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLD 598
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
+ KLAA LMEL + YV++S++Y++ G+ D +VR + ++K GCSWI +
Sbjct: 599 IGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEIN 658
Query: 578 DKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD 611
++VH F + S + I L + ++FD
Sbjct: 659 NEVHTFASRDMSHPNSDSIYQMLGELVAVMQDFD 692
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 201/430 (46%), Gaps = 50/430 (11%)
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
++P+R R VC G C AA DVV ++ K GR+ +A
Sbjct: 18 CHVPSRRRRRVCD----------GLCSAAAADNGCAESPDVVLECKRLNRLVKSGRLADA 67
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
++FD+MP KNVVAWT+++ GY + E +F M G+A N AC
Sbjct: 68 LDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADL 127
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
R G QVH L R GF D +G+ +I MY R G + A +VF M D V + SLI
Sbjct: 128 GALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLI 187
Query: 242 SGYVHNGEIEEAYRLFERM-------------------------------------PGKD 264
S + NGE E A +M +
Sbjct: 188 SAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQS 247
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
S T +I +S G + + +F+ + K+ V+W +++ ++ + + EEA + F +M+
Sbjct: 248 VYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMIS 307
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ V PN+ LS VL A ++ G Q+H +K ++ +D+ + N+L+S+Y + G V +
Sbjct: 308 EGVDPNEFALSIVL---GACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEE 364
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
+ I+ ++VS+ + IS QNG GE+A+ L +M EG PN F SVLS+C
Sbjct: 365 LEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCAD 424
Query: 445 VGLVEEGFIY 454
V +++G +
Sbjct: 425 VASLDQGMQF 434
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 186/412 (45%), Gaps = 27/412 (6%)
Query: 4 RTSASYNAMITALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
R+ + Y++ TALI+ N A +F ++ +N VS+ +M+ ++R G EA ++
Sbjct: 244 RSQSVYSS--TALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQV 301
Query: 61 YVNM------PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+ +M P + S+ A G + +GR + I ++ D+ +++ Y +
Sbjct: 302 FGDMISEGVDPNEFALSIVLGA--CGSIGLGRQLHCSAIKHDLI-TDIRVSNALLSMYGR 358
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G V E + +K+ ++V+WT + + E L M G N + +
Sbjct: 359 TGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSV 418
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
+C +G+Q H L + G D +I GN++I MY + G M A F +M D
Sbjct: 419 LSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDV 478
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNM 290
SWNSLI G+ +G+ +A +F +M D ++ ++ G + G +E+ F +
Sbjct: 479 TSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRL 538
Query: 291 MPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
M ++ T + +I N +++EA R +M P+ L ++L++
Sbjct: 539 MIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKLHR 595
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L+ G +++++ + D + + ++Y+ G DA ++ +DE +
Sbjct: 596 NLDIGKLAADRLMELS-DRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGV 646
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 186/475 (39%), Gaps = 101/475 (21%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------S 71
S+ A E+F M + V Y ++I+ F R G F A E + M + +
Sbjct: 164 SLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILT 223
Query: 72 VCSNAL---ISGYL--KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
C L I GYL K+G + + V + +++D Y + G A+ +FD
Sbjct: 224 ACPRVLGQQIHGYLIKKIG-----------LRSQSVYSSTALIDFYSRNGEFKLAKAVFD 272
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+ KNVV+W +M+ Y++ E+ +F M G+ N L+I+ ACG
Sbjct: 273 SLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL--- 329
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G Q+H + DI + N++++MYGR G ++E + + + D VSW + IS
Sbjct: 330 GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQ 389
Query: 247 NGEIEEAYRLFERMPGKDFV---------------------------------------S 267
NG E+A L +M + F +
Sbjct: 390 NGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICT 449
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+I +S G + + F++M D +W ++I G + +A F +M +
Sbjct: 450 GNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGI 509
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ T VL + + +G L+ + ++D Y
Sbjct: 510 KPDDSTFLGVLMGCNHSGMVEEG-----------------------ELFFRL--MIDQYS 544
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
FT Y MI +NG +EAL + M E P+ + + ++L++C
Sbjct: 545 -FTPAPSH----YACMIDMLGRNGRFDEALRMINDMPFE---PDALIWKTLLASC 591
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
DV ++ ++ K G + DA +F + +N+V++ S++SG+ +NG E AL +F M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
+ G+ PN + L AC +G + G S+ +C++++ R GSL
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGE-QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 485 AEAIDLINSMTFEPPPGVWG--ALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVL 540
A ++ + M P V G +L+ A + +LA A +++ L+P+ T +L
Sbjct: 166 PAAKEVFDRMD---SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTIL 222
Query: 541 SDLYSVIGKKRDGNRVR 557
+ V+G++ G ++
Sbjct: 223 TACPRVLGQQIHGYLIK 239
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 288/512 (56%), Gaps = 31/512 (6%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+ +L++ Y K G A +F+ M K++ W +++ Y + G+ A F+KMP++++
Sbjct: 180 ATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI 239
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
V+W +M+ GY + + +F M + ++ TL + AC + G Q+H
Sbjct: 240 VSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHA 299
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ R + +GN++I+MY + G ++ A + HN
Sbjct: 300 YILRAETETSGAVGNALISMYAKSGGVEIARLIVE------------------HN----- 336
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
R + +++T+++ G++ GN++ + E+FN + ++D V WTA+I G+V N +
Sbjct: 337 ------RTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLW 390
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
+A F M+ + PN TL+++LS S++ L G QIHA +K S S+ N+L
Sbjct: 391 NDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNAL 450
Query: 373 VSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+++Y+K GN+ A R+F + ++ IVS+ SMI AQ+GLG+EA+NLF +M G+ P+
Sbjct: 451 IAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPD 510
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
IT++ VLSAC HVGLVE+G Y+ M ++ IEP HYACM+D+ GRAG L EA I
Sbjct: 511 HITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFI 570
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
SM EP WG+LL + + H N DLAK+AA+ L+ ++P ++ Y+ L+++YS GK
Sbjct: 571 ESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWE 630
Query: 552 DGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ + R K + +RK G SWI +K++VH F
Sbjct: 631 NAAQTRKLMKDRGVRKEKGISWIHIKNEVHAF 662
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 204/411 (49%), Gaps = 65/411 (15%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N L++ Y K G A +F+ M K +W +++ GY K+G +R + +MP+ + V
Sbjct: 49 NNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPV 108
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WTA++ GY + F++ +F M + + T++ + +C G ++H V
Sbjct: 109 SWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFV 168
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G + + S++ MY + G A VF M+ ++ +WN+LIS Y+ +G+ E A
Sbjct: 169 VKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAA 228
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
FE+MP +D VSW +MI+G+S +G +N+ E
Sbjct: 229 SQFEKMPDRDIVSWNSMISGYSQQG--------YNL-----------------------E 257
Query: 315 AFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A F +ML + ++P+ TL+S+LSA A LN G QIHA++++ E+ ++ N+L+
Sbjct: 258 ALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALI 317
Query: 374 SL---------------------------------YSKCGNVVDAYRIFTNIDERNIVSY 400
S+ Y+K GNV A IF + +R++V++
Sbjct: 318 SMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAW 377
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+MI G+ QNGL +AL LFR M +EG PN T ++LS + + ++E G
Sbjct: 378 TAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHG 428
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 210/451 (46%), Gaps = 63/451 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEI----FATMPMRNAVSYAAMITGFVRRGMFYE 56
M + +++NA+I+ + + FE+ F MP R+ VS+ +MI+G+ ++G E
Sbjct: 203 MTVKNISTWNALISLYMQSG-----QFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLE 257
Query: 57 AEELY---VNMPARWRD--------SVCSN---------------------------ALI 78
A ++ +N P+ D S C+N ALI
Sbjct: 258 ALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALI 317
Query: 79 SGYLKVGRCEEAARIFEA--MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
S Y K G E A I E +++A+ S++DGY K G V AREIF+K+ +++VVAW
Sbjct: 318 SMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAW 377
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
TAM+ GY++ + D +LF M G NS TL + G Q+H +
Sbjct: 378 TAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIK 437
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYR 255
G + N++I MY + G ++ A +VF + + K++ VSW S+I +G +EA
Sbjct: 438 AGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAIN 497
Query: 256 LFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGF 306
LFERM D +++ +++ + G +E+ + +NMM E ++ + +I +
Sbjct: 498 LFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLY 557
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+EA+ FIE + + P+ + S+L AS +++ A + + +
Sbjct: 558 GRAGLLQEAY-LFIESM--PIEPDNIAWGSLL-ASCKIHKNADLAKVAAERLLLIDPGNS 613
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+L ++YS CG +A + + +R +
Sbjct: 614 GAYLALANVYSACGKWENAAQTRKLMKDRGV 644
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/408 (39%), Positives = 252/408 (61%), Gaps = 1/408 (0%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D++ N+ + R G +D A +F M ++D VSWN+++ GY GE E+A+ LF+RMP
Sbjct: 194 DVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMP 253
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G++ VSW+T+++ + KG++E + +F+ MP K+ VTWT ++S EEA R F E
Sbjct: 254 GRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTE 313
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M+ + + + + S+L+A A + +L G +IH HV + + + N+L+ ++ KCG
Sbjct: 314 MMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGC 373
Query: 382 VVDAYRIF-TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
V A IF T I E+++VS+N +I GFA +G GE+AL LF +MK +G P+ +T ++VLS
Sbjct: 374 VNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLS 433
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC H+GLVEEG +F +M+T Y I+P EHY CMVD+LGR G + EA+D+I M +EP
Sbjct: 434 ACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNE 493
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
+WG+LL A R H N++ A+LA L L+P SA Y VLS++Y+ GK D + R++
Sbjct: 494 VIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQM 553
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K +K+ G SWI L + H F G + + +I + +S K
Sbjct: 554 KGTGSQKTAGSSWIELNEAFHEFTVGDRKHPESDQISDMIDRLSSHVK 601
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 148/287 (51%), Gaps = 8/287 (2%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA+I A N + +A ++F M R+ VS+ + VR+G A ++ MP +
Sbjct: 168 NALIDAYSKNQ-GLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEK-- 224
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+V N ++ GY K G E+A +F+ M ++VV+W ++V YCKKG + AR IFDKMP
Sbjct: 225 DTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMP 284
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
KN+V WT MV + E+ LF M + + I + + AC G +
Sbjct: 285 AKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKR 344
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNG 248
+H V + ++ N+++ M+ + G ++ A+ +F + + ++D VSWN +I G+ +G
Sbjct: 345 IHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHG 404
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
E+A LF +M + F V+ +++ + G +E+ F M
Sbjct: 405 PGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANM 451
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 207/499 (41%), Gaps = 103/499 (20%)
Query: 20 NCSIYEAFEIFATMPMRN--AVSYAAMITGFVRRGMF-YEAEELYVNMPARWRDSVCSNA 76
N + A +F +P+R +Y+ +I G+ +V D+ NA
Sbjct: 110 NSLPHAALAVFLDVPLRQRGTFTYSFLIKALAAAGLTPVRGAHAHVVKLGSAEDTFVGNA 169
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
LI Y K +A ++F+ M +DVV+W + + ++G V AR +FD+MPEK+ V+W
Sbjct: 170 LIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSW 229
Query: 137 TAMVDGYMKVDCFEDGFDLFLSM----------------RRGGM-----------AFNSI 169
M+DGY K E F+LF M ++G M A N +
Sbjct: 230 NTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLV 289
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T TI+ AC + E ++ + + D+I SI+ G + ++ +
Sbjct: 290 TWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHV 349
Query: 230 SK----RDAVSWNSLISGYVHNGEIEEAYRLFE-RMPGKDFVSWTTMITGFSSKGNLEKS 284
+ R + N+L+ + G + A +F+ + KD VSW +I GF+ G EK+
Sbjct: 350 RQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKA 409
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+ELF M ++ GF P+ +TL +VLSA
Sbjct: 410 LELFAQMKQQ----------GF---------------------HPDAVTLINVLSACTHM 438
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+ +G + A NME+D I+ I Y M+
Sbjct: 439 GLVEEGRRFFA-----NMETDYGIKP-------------------------QIEHYGCMV 468
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
+ GL +EA+++ ++M E PN++ + S+LSAC VE + ++ L N+
Sbjct: 469 DLLGRGGLIKEAVDMIKRMPWE---PNEVIWGSLLSACRLHKNVEYAEL---AVNELSNL 522
Query: 465 EPGPE-HYACMVDILGRAG 482
+P +YA + +I AG
Sbjct: 523 QPSSAGNYAVLSNIYAEAG 541
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFAT-MPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
R++ NA++ C + A IF T + ++ VS+ +I GF G +A EL+
Sbjct: 356 RSTLVCNALMDMFCKCGC-VNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFA 414
Query: 63 NMPAR--WRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKK 115
M + D+V ++S +G EE R F M ++ + +G MVD +
Sbjct: 415 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRG 474
Query: 116 GRVIEAREIFDKMP-EKNVVAWTAMVDG 142
G + EA ++ +MP E N V W +++
Sbjct: 475 GLIKEAVDMIKRMPWEPNEVIWGSLLSA 502
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 279/484 (57%), Gaps = 33/484 (6%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFF 182
IF+++ + + ++ + K F D F LF M++ A + T +L + C
Sbjct: 60 IFNRLLNPSTFLYNILLKIFSKNSQFIDTFSLFYRMKQSEYALSDKYTYPLLIKVCSNEL 119
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
R +EG VHG R G D+ +G+S+I+ YG+ + A KVF + +R+ VSW ++++
Sbjct: 120 RLKEGEIVHGSAIRCGVSDDVYVGSSLISFYGKCKEILSARKVFDEIPERNVVSWTAMVA 179
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM----------- 291
GY G++E A R+FERMP ++ SW MI+G G+L + ++F+ M
Sbjct: 180 GYASVGDLENAKRVFERMPERNLPSWNAMISGLGKAGDLSGARKVFDEMVERNVVSFTVM 239
Query: 292 --------------------PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
PEKD V W+A+ISG+ NEQ EA + F EM+ +V+P++
Sbjct: 240 IDGYAKVGDMASARALFDEAPEKDVVAWSALISGYSRNEQPNEAVKIFFEMVSMNVKPDE 299
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMES-DVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ S++SA + + + +++ + ++++ + +L+ +++KCGN+ A ++F
Sbjct: 300 FIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDTRQAHVLAALIDMHAKCGNMEKAVKLFQ 359
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
++ R+++ S+I G + +G G EA+ LF +M DEGL+P+ + F +L+AC+ GL+E+
Sbjct: 360 DMPSRDLIPCCSLIQGLSIHGRGVEAVELFNRMLDEGLIPDTVAFTVILTACSRGGLIED 419
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G+ +F +MK Y++ P P HYACMVD+L RAG L A DL+ SM +P WGALLGA
Sbjct: 420 GWHFFDTMKNKYSVVPSPNHYACMVDLLSRAGQLRAAYDLLKSMPLKPHACAWGALLGAC 479
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
+ H +++L + A L+ELEP+ A YV+LS++Y+ + D + VR + K + IRK PG
Sbjct: 480 KLHGDVELREEVANRLLELEPEKAGSYVLLSNIYASANQWLDVSIVRDEMKERGIRKIPG 539
Query: 571 CSWI 574
CS+I
Sbjct: 540 CSYI 543
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 143/281 (50%), Gaps = 7/281 (2%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I A ++F +P RN VS+ AM+ G+ G A+ ++ MP R S NA+ISG
Sbjct: 156 ILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFERMPERNLPSW--NAMISGLG 213
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
K G A ++F+ MVE++VV++ M+DGY K G + AR +FD+ PEK+VVAW+A++ G
Sbjct: 214 KAGDLSGARKVFDEMVERNVVSFTVMIDGYAKVGDMASARALFDEAPEKDVVAWSALISG 273
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY- 201
Y + + + +F M + + + L AC + V +S+ D
Sbjct: 274 YSRNEQPNEAVKIFFEMVSMNVKPDEFIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDTR 333
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+ ++I M+ + G M++A K+F M RD + SLI G +G EA LF RM
Sbjct: 334 QAHVLAALIDMHAKCGNMEKAVKLFQDMPSRDLIPCCSLIQGLSIHGRGVEAVELFNRML 393
Query: 262 GK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
+ D V++T ++T S G +E F+ M K V
Sbjct: 394 DEGLIPDTVAFTVILTACSRGGLIEDGWHFFDTMKNKYSVV 434
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 170/407 (41%), Gaps = 94/407 (23%)
Query: 70 DSVCSNALISGYLKVGRCEE---AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
D ++LIS Y G+C+E A ++F+ + E++VV+W +MV GY G + A+ +F+
Sbjct: 139 DVYVGSSLISFY---GKCKEILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFE 195
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+MPE+N+ +W AM+ G K +F M + N ++ T++ +
Sbjct: 196 RMPERNLPSWNAMISGLGKAGDLSGARKVFDEM----VERNVVSFTVMIDG--------- 242
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
Y ++G M A +F ++D V+W++LISGY
Sbjct: 243 --------------------------YAKVGDMASARALFDEAPEKDVVAWSALISGYSR 276
Query: 247 NGEIEEAYRLF----------------------ERMPGKDFVSWT--------------- 269
N + EA ++F ++ D W
Sbjct: 277 NEQPNEAVKIFFEMVSMNVKPDEFIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDTRQAH 336
Query: 270 ---TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+I + GN+EK+++LF MP +D + ++I G + + EA F ML +
Sbjct: 337 VLAALIDMHAKCGNMEKAVKLFQDMPSRDLIPCCSLIQGLSIHGRGVEAVELFNRMLDEG 396
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN---SLVSLYSKCGNVV 383
+ P+ + + +L+A + + G H N S V N +V L S+ G +
Sbjct: 397 LIPDTVAFTVILTACSRGGLIEDG--WHFFDTMKNKYSVVPSPNHYACMVDLLSRAGQLR 454
Query: 384 DAYRIFTNIDER-NIVSYNSMISGFAQNG---LGEEALNLFRKMKDE 426
AY + ++ + + ++ +++ +G L EE N +++ E
Sbjct: 455 AAYDLLKSMPLKPHACAWGALLGACKLHGDVELREEVANRLLELEPE 501
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 138/320 (43%), Gaps = 32/320 (10%)
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASA 342
S +FN + + ++ F N Q+ + F F M + + ++ T ++ +
Sbjct: 57 STSIFNRLLNPSTFLYNILLKIFSKNSQFIDTFSLFYRMKQSEYALSDKYTYPLLIKVCS 116
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
L +G +H ++ + DV + +SL+S Y KC ++ A ++F I ERN+VS+ +
Sbjct: 117 NELRLKEGEIVHGSAIRCGVSDDVYVGSSLISFYGKCKEILSARKVFDEIPERNVVSWTA 176
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG--------LVEEGFIY 454
M++G+A G E A +F +M + L P+ +S L + +VE +
Sbjct: 177 MVAGYASVGDLENAKRVFERMPERNL-PSWNAMISGLGKAGDLSGARKVFDEMVERNVVS 235
Query: 455 FKSM-------------KTLYNIEPGPE--HYACMVDILGRAGSLAEAIDL---INSMTF 496
F M + L++ P + ++ ++ R EA+ + + SM
Sbjct: 236 FTVMIDGYAKVGDMASARALFDEAPEKDVVAWSALISGYSRNEQPNEAVKIFFEMVSMNV 295
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV--LSDLYSVIGKKRDGN 554
+P + +L+ A N DLAK +L + D+ +V+ L D+++ G
Sbjct: 296 KPDEFIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDTRQAHVLAALIDMHAKCGNMEKA- 354
Query: 555 RVRMKKKLKRIRKSPGCSWI 574
V++ + + P CS I
Sbjct: 355 -VKLFQDMPSRDLIPCCSLI 373
>gi|302753930|ref|XP_002960389.1| hypothetical protein SELMODRAFT_73601 [Selaginella moellendorffii]
gi|300171328|gb|EFJ37928.1| hypothetical protein SELMODRAFT_73601 [Selaginella moellendorffii]
Length = 577
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 303/552 (54%), Gaps = 20/552 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
R S +++ +I A + + A +F +P V+ A++ +RG A +++
Sbjct: 25 RDSVAWSCLIGAFVKIG-DLEHARRVFDLLPRWTVVTSTAILVALAKRGKAENARAMFLA 83
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
MP R D V NA+I+ Y + G + A +F M ++ V+W +++DG + A++
Sbjct: 84 MPER--DLVAWNAMITAYAQNGNLQVAQAMFFRMPARNFVSWNAIIDGCAQGQDEALAKK 141
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD MP++ VV+WTAMV Y + E+ L M A N ++ ++ +A
Sbjct: 142 VFDSMPQREVVSWTAMVATYSQSGRLEEAQALLSKMP----ALNIVSWNVMIQA------ 191
Query: 184 YREGVQVHGLVSRF--GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+ + + V RF ++D + N+IIT Y + + A F M +RD VSW ++I
Sbjct: 192 FADNLLVEEAKERFDRAPEHDFVSWNAIITAYAQTSQIFLARAAFDRMPQRDVVSWATMI 251
Query: 242 SGYVHNGE--IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP---EKDD 296
Y G+ +++A +F+R P ++ VSW MITG+S+ G +++S LF MP E D
Sbjct: 252 QSYAQEGQPSMDQAKEIFDRAPQRNVVSWNVMITGYSASGRIKQSRGLFERMPMMAEHDL 311
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+W A+I+G ++N E A + F+EM R+ P+ + +S L+A A A+L IH
Sbjct: 312 VSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDPASYTSALAACAGLASLGAARDIHWR 371
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+ K +E+D + N+LV Y K G + DA +F ++ ++V++N++ +G ++ G
Sbjct: 372 LCKAGLETDAFVHNALVDFYGKSGRMADAELVFQSLASVDVVTWNALAAGLSRQGSYRLV 431
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
++L +KD+GL P+ ITFL++L+A H GLV+ G F +M Y IEPG EHY C+VD
Sbjct: 432 VDLLWAIKDQGLEPDGITFLALLAAYGHAGLVDHGRRAFAAMVETYRIEPGIEHYHCLVD 491
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+LGRA L EA+ ++++M P W +L A NL +A +A + L+ ++PD
Sbjct: 492 MLGRANRLEEAVAVVSAMPHRPSSVTWTTVLSACVKWKNLGVASVAFESLLGIDPDGPAA 551
Query: 537 YVVLSDLYSVIG 548
YV+++++Y G
Sbjct: 552 YVLMANVYGSAG 563
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 225/505 (44%), Gaps = 65/505 (12%)
Query: 108 MVDGYCKKGRVIEAREIFDKMP-EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
M+ Y GR +A+ +FD++P ++ VAW+ ++ ++K+ E +F + R +
Sbjct: 1 MLTVYAHNGRPWDAKNLFDRIPGGRDSVAWSCLIGAFVKIGDLEHARRVFDLLPR----W 56
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM------- 219
+T T + A + + + + + D++ N++IT Y + G +
Sbjct: 57 TVVTSTAILVALAKRGKAENARAMFLAMP----ERDLVAWNAMITAYAQNGNLQVAQAMF 112
Query: 220 ----------------------DE--ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
DE A KVF M +R+ VSW ++++ Y +G +EEA
Sbjct: 113 FRMPARNFVSWNAIIDGCAQGQDEALAKKVFDSMPQREVVSWTAMVATYSQSGRLEEAQA 172
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
L +MP + VSW MI F+ +E++ E F+ PE D V+W AII+ + Q A
Sbjct: 173 LLSKMPALNIVSWNVMIQAFADNLLVEEAKERFDRAPEHDFVSWNAIITAYAQTSQIFLA 232
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F M ++DV + S A +++Q +I + N+ S N +++
Sbjct: 233 RAAFDRMPQRDVVSWATMIQSY--AQEGQPSMDQAKEIFDRAPQRNVVS----WNVMITG 286
Query: 376 YSKCGNVVDAYRIFTNID---ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
YS G + + +F + E ++VS+N++I+G NGL E AL LF +M G P+
Sbjct: 287 YSASGRIKQSRGLFERMPMMAEHDLVSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDP 346
Query: 433 ITFLSVLSACNHVGLVEEGF---IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
++ S L+AC GL G I+++ K +E + +VD G++G +A+A +
Sbjct: 347 ASYTSALAAC--AGLASLGAARDIHWRLCKA--GLETDAFVHNALVDFYGKSGRMADA-E 401
Query: 490 LINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYS 545
L+ W AL G L +DL L A LEPD T ++ L Y
Sbjct: 402 LVFQSLASVDVVTWNALAAGLSRQGSYRLVVDL--LWAIKDQGLEPDGIT-FLALLAAYG 458
Query: 546 VIGKKRDGNRVRMKKKLKRIRKSPG 570
G G R ++ R PG
Sbjct: 459 HAGLVDHGRRA-FAAMVETYRIEPG 482
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 171/445 (38%), Gaps = 140/445 (31%)
Query: 1 MADRTSASYNAMITALINN-NCSIYEAF-----------------------------EIF 30
M +R ++NAMITA N N + +A ++F
Sbjct: 84 MPERDLVAWNAMITAYAQNGNLQVAQAMFFRMPARNFVSWNAIIDGCAQGQDEALAKKVF 143
Query: 31 ATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA----RW------------------ 68
+MP R VS+ AM+ + + G EA+ L MPA W
Sbjct: 144 DSMPQREVVSWTAMVATYSQSGRLEEAQALLSKMPALNIVSWNVMIQAFADNLLVEEAKE 203
Query: 69 -------RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR--VI 119
D V NA+I+ Y + + A F+ M ++DVV+W +M+ Y ++G+ +
Sbjct: 204 RFDRAPEHDFVSWNAIITAYAQTSQIFLARAAFDRMPQRDVVSWATMIQSYAQEGQPSMD 263
Query: 120 EAREIFDKMPEKNVVAWTAMVDGY-----------------------------MKVDCFE 150
+A+EIFD+ P++NVV+W M+ GY + +
Sbjct: 264 QAKEIFDRAPQRNVVSWNVMITGYSASGRIKQSRGLFERMPMMAEHDLVSWNALIAGHLD 323
Query: 151 DGFD-----LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
+G D LFL M R G + + + T AC +H + + G + D +
Sbjct: 324 NGLDERALQLFLEMDRRGCSPDPASYTSALAACAGLASLGAARDIHWRLCKAGLETDAFV 383
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG---------------------- 243
N+++ YG+ G M +A VF ++ D V+WN+L +G
Sbjct: 384 HNALVDFYGKSGRMADAELVFQSLASVDVVTWNALAAGLSRQGSYRLVVDLLWAIKDQGL 443
Query: 244 -------------YVHNGEIEEAYRLFERM-------PGKDFVSWTTMITGFSSKGNLEK 283
Y H G ++ R F M PG + + ++ LE+
Sbjct: 444 EPDGITFLALLAAYGHAGLVDHGRRAFAAMVETYRIEPGIEH--YHCLVDMLGRANRLEE 501
Query: 284 SIELFNMMPEK-DDVTWTAIISGFV 307
++ + + MP + VTWT ++S V
Sbjct: 502 AVAVVSAMPHRPSSVTWTTVLSACV 526
>gi|357490817|ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517031|gb|AES98654.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 206/671 (30%), Positives = 329/671 (49%), Gaps = 98/671 (14%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRR-------GMFYEA--------------------- 57
A ++F M +RN +++AMI G R G+FY
Sbjct: 136 ARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGK 195
Query: 58 ----------EELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGS 107
+ + RW + N++++ Y K G + A +IF+ M E+D VAW +
Sbjct: 196 CRDLETGRLIHSMVIRRGMRWSKHL-RNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNA 254
Query: 108 MVDGYCKKGRVIEAREIFDKMPE------------------------------------- 130
M+ G+C+ G + +A++ FD M +
Sbjct: 255 MISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFG 314
Query: 131 --KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+V WT+M+ G+ + DL M G+ N+IT+ AC G+
Sbjct: 315 IAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGL 374
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++H + + ++++GNS+I MY + G + A +F MMS+RD SWNS+I GY G
Sbjct: 375 EIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAG 434
Query: 249 EIEEAYRLFERMPGKD----FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT------ 298
+A+ LF +M D ++W MITG+ G +++++LF + EKD T
Sbjct: 435 FCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSI-EKDGKTKRNAAS 493
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W ++ISGFV + Q ++A + F M + PN +T+ S+L A + +IH V
Sbjct: 494 WNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAV 553
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ + S++S+ N L+ Y+K GN++ + IF + ++ VS+NSM+S + +G E AL+
Sbjct: 554 RRILVSELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALD 613
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M+ +GL PN+ TF S+L A H G+V+EG F + Y + G EHY+ MV +L
Sbjct: 614 LFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLL 673
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR+G LAEA+D I SM EP VWGALL A R H N +A LA + ++E EP +
Sbjct: 674 GRSGKLAEALDFIQSMPIEPNSSVWGALLTACRIHRNFGVAVLAGKRMLEFEPGNNITRH 733
Query: 539 VLSDLYSVIGK-KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
+LS YS+ GK + +G K + K G SWI + VH F+ G +S L ++
Sbjct: 734 LLSQAYSLCGKFEPEGE--------KAVNKPIGQSWIERNNVVHTFVVGDQSNPYLDKLH 785
Query: 598 VTLQTISKGTK 608
L+ ++ K
Sbjct: 786 SWLKRVAVNVK 796
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 215/398 (54%), Gaps = 10/398 (2%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+V Y K G + AR++F++M +N+ W+AM+ G + + + LF +M R G+ +
Sbjct: 123 LVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPD 182
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
L + +ACG+ G +H +V R G + L NSI+ +Y + G MD A K+F
Sbjct: 183 EFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFD 242
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD-----FVSWTTMITGFSSKGNLE 282
M +RD+V+WN++ISG+ NGEI +A + F+ M KD V+W +I+ ++ G+ +
Sbjct: 243 CMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQ-KDGVEPSLVTWNILISCYNQLGHCD 301
Query: 283 KSIELFNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+I+L M D TWT++ISGF + A EM V N +T++S
Sbjct: 302 LAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAA 361
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA AA +L+ G +IH+ VKMN+ +V + NSL+ +Y KCG++ A IF + ER++
Sbjct: 362 SACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVY 421
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+NS+I G+ Q G +A LF KM++ PN IT+ +++ G ++ FKS+
Sbjct: 422 SWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSI 481
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
+ + + ++ ++G +A+ + +M F
Sbjct: 482 EKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQF 519
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 123/226 (54%), Gaps = 1/226 (0%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T +++ ++ G L + ++FN M ++ TW+A+I G N+ + E F M+R V
Sbjct: 121 TKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVL 180
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P++ L VL A L G IH+ V++ M ++NS++++Y+KCG + A +I
Sbjct: 181 PDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKI 240
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F +DER+ V++N+MISGF QNG +A F M+ +G+ P+ +T+ ++S N +G
Sbjct: 241 FDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHC 300
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ + M+ + I P + M+ + G ++ A+DL+ M
Sbjct: 301 DLAIDLMRKME-WFGIAPDVYTWTSMISGFTQKGRISHALDLLKEM 345
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS- 367
N EA + + R +T ++L + + G ++H+ ++ + +V+
Sbjct: 61 NGSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHS---RIGLVENVNP 117
Query: 368 -IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
++ LVS+Y+KCG + A ++F + RN+ ++++MI G ++N E + LF M +
Sbjct: 118 FVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRD 177
Query: 427 GLVPNQITFLSVLSACNHVGLVEEG 451
G++P++ VL AC +E G
Sbjct: 178 GVLPDEFLLPKVLQACGKCRDLETG 202
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 196/629 (31%), Positives = 329/629 (52%), Gaps = 54/629 (8%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRN-AVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
N++++ N I A ++F M RN VS+ ++I+ + G EA L+ M
Sbjct: 49 NSLVSMYAKCN-DILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQ--- 104
Query: 69 RDSVCSNALI----------SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
+ V +N S + K+G E A I ++ DV ++V + + G++
Sbjct: 105 KAGVGANTYTLVAALQACEDSSFKKLGM-EIHAAILKSNQVLDVYVANALVAMHVRFGKM 163
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
A IFD++ EK+ + W +M+ G+ + + + F ++ + + ++L + A
Sbjct: 164 SYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAAS 223
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
GR G ++H + D ++ +GN++I MY + + A VF M +D +SW
Sbjct: 224 GRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWT 283
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK----------------------------------- 263
++I+ Y N EA +L ++ K
Sbjct: 284 TVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKR 343
Query: 264 ---DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
D + +I ++ GN+ + +F + KD V+WT++IS +V+N EA F
Sbjct: 344 GLSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFY 403
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M V P+ +TL S+LSA+A+ + LN+G +IH + + + S NSLV +Y+ CG
Sbjct: 404 LMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCG 463
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
++ +AY++F +++V + +MI+ + +G G+ A+ LF M+D+ L+P+ ITFL++L
Sbjct: 464 SLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLY 523
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC+H GL+ EG ++MK Y +EP PEHYAC+VD+LGRA L EA + SM EP
Sbjct: 524 ACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTA 583
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
VW A LGA R H N L ++AAQ L++L+PDS YV++S++++ G+ +D VRM+
Sbjct: 584 EVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRM 643
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
K ++K+PGCSWI + +KVH FL KS
Sbjct: 644 KGGGLKKNPGCSWIEVGNKVHTFLVRDKS 672
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 171/325 (52%), Gaps = 40/325 (12%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
MR G+ F+S T + +ACG G ++HGL+ + G+D + + NS+++MY +
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 219 MDEANKVFSMMSKR-DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT-TMITGFS 276
+ A K+F M++R D VSWNS+IS Y NG+ EA LF M + T T++
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 277 SK--------------------------------------GNLEKSIELFNMMPEKDDVT 298
+ G + + +F+ + EKD++T
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W ++I+GF N Y EA ++F + +++P++++L S+L+AS L G +IHA+ +
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K ++S++ I N+L+ +YSKC V A +F + ++++S+ ++I+ +AQN EAL
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300
Query: 419 LFRKMKDEGLVPNQITFLSVLSACN 443
L RK++ +G+ + + S L AC+
Sbjct: 301 LLRKVQTKGMDVDTMMIGSTLLACS 325
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 191/405 (47%), Gaps = 72/405 (17%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEK-DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
+N+L+S Y K A ++F+ M E+ DVV+W S++ Y G+ +EA
Sbjct: 48 ANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEA----------- 96
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
LF M++ G+ N+ TL +AC + G+++H
Sbjct: 97 --------------------LGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHA 136
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ + D+ + N+++ M+ R G M A ++F + ++D ++WNS+I+G+ NG E
Sbjct: 137 AILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNE 196
Query: 253 AYRLFERMP--------------------------GKDFVSWT-------------TMIT 273
A + F + GK+ ++ T+I
Sbjct: 197 ALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLID 256
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+S + + +F+ M KD ++WT +I+ + N + EA + ++ K + + +
Sbjct: 257 MYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMM 316
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ S L A + L+ ++H + +K + SD+ +QN ++ +Y+ CGN+ A R+F +I
Sbjct: 317 IGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIK 375
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
+++VS+ SMIS + NGL EAL +F MK+ + P+ IT +S+
Sbjct: 376 CKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSI 420
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 332/641 (51%), Gaps = 58/641 (9%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFV------RRGM 53
R + YNAMIT +NN Y A +F M + ++A+++ G ++ +
Sbjct: 111 RDTVMYNAMITGFSHNN-DGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCV 169
Query: 54 FYEAEELYVNMPARWRDSVCSNALISGYLKVGRC----EEAARIFEAMVEKDVVAWGSMV 109
+ A L A + SV SNAL+S Y K A ++F+ ++EKD +W +M+
Sbjct: 170 QFHAAAL--KSGAGYITSV-SNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMM 226
Query: 110 DGYCKKGRVIEAREIFDKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
GY K G E+ + M + +VA+ AM+ GY+ +++ ++ M G+ +
Sbjct: 227 TGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDE 286
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSR---FGFDYDIILGNSIITMYGRLGFMDEANKV 225
T + AC + G QVH V R F F +D
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----------------------- 323
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSI 285
NSL+S Y G+ +EA +FE+MP KD VSW +++G+ S G++ ++
Sbjct: 324 ------------NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+F M EK+ ++W +ISG N EE + F M R+ P S + + A
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
G Q HA ++K+ +S +S N+L+++Y+KCG V +A ++F + + VS+N++I+
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
Q+G G EA++++ +M +G+ P++IT L+VL+AC+H GLV++G YF SM+T+Y I
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
PG +HYA ++D+L R+G ++A +I S+ F+P +W ALL R H N++L +AA
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
L L P+ Y++LS++++ G+ + RVR + + ++K CSWI ++ +VH FL
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLV 671
Query: 586 GRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
S + + + + LQ + K + + P + L +E D
Sbjct: 672 DDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESD 712
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 206/494 (41%), Gaps = 111/494 (22%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKN 132
N LI Y K A ++F+ + E D +A +MV GYC G + AR +F+K P ++
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF-RYREGVQVH 191
V + AM+ G+ + +LF M+ G ++ T + ++ VQ H
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFH 172
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLG----FMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+ G Y + N+++++Y + + A KVF + ++D SW ++++GYV N
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 248 GEIEEAYRLFERMPGK-DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
G + L E M V++ MI+G+ ++G
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF-------------------------- 266
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
Y+EA M+ + ++ T SV+ A A L G Q+HA+V++ +
Sbjct: 267 -----YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSF 320
Query: 367 SIQNSLVSLYSKC-------------------------------GNVVDAYRIFTNIDER 395
NSLVSLY KC G++ +A IF + E+
Sbjct: 321 HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN------------------------ 431
NI+S+ MISG A+NG GEE L LF MK EG P
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYH 440
Query: 432 ----QITFLSVLSACNHV-------GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+I F S LSA N + G+VEE F++M L ++ + ++ LG+
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-----WNALIAALGQ 495
Query: 481 AGSLAEAIDLINSM 494
G AEA+D+ M
Sbjct: 496 HGHGAEAVDVYEEM 509
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 70/301 (23%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG + FGF + N +I +Y + ++ A ++F +S+ D ++ +++SGY +G+
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 250 IEEAYRLFERMP--GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
I A +FE+ P +D V + MITGFS
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSH------------------------------ 125
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA-TLNQGSQIHAHVVKMNMESDV 366
NN+ Y A F +M + +P+ T +SVL+ A A Q Q HA +K
Sbjct: 126 NNDGY-SAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYIT 184
Query: 367 SIQNSLVSLYSKCGN----VVDAYRIFTNI---DERN----------------------- 396
S+ N+LVS+YSKC + + A ++F I DER+
Sbjct: 185 SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 397 ------IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+V+YN+MISG+ G +EAL + R+M G+ ++ T+ SV+ AC GL++
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 451 G 451
G
Sbjct: 305 G 305
>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
Length = 671
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 327/604 (54%), Gaps = 55/604 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---PARWR-DSVCSNALI 78
+ +A +F MP RN VS++ +I R G+ +A L+ M R R +S AL+
Sbjct: 53 LADARGVFDEMPRRNVVSWSVLIVASSRLGVLGDALSLFAGMLRGGERDRPNSFTVAALV 112
Query: 79 SGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+G + ++ + V ++D G++VD Y K GRV + F P+++V+
Sbjct: 113 AGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVL 172
Query: 135 AWTAMVDGYMKVDCFEDGF-DLFLSMRRGGMAFNSITLTILFEACGRFFRYRE----GVQ 189
+WT+M+ V+ + G+ D + + + + F + F E G Q
Sbjct: 173 SWTSMIACL--VNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQ 230
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG + + G + D LG +++ MYGR G MDE ++ + + DA S SL++ Y NG
Sbjct: 231 VHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYARNGC 289
Query: 250 IEEAYRLFERM----------------------------------PGKDFVSWTTM---- 271
EA R+F M K+F T+
Sbjct: 290 NMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNA 349
Query: 272 -ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+T + G++ S +FN + KD ++WTA+++ +V N+ +EA +F EM+RK + +
Sbjct: 350 IVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESS 409
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
++SVL A +AT++L+ G QIH+ VVK+ ++ D S++N+LV++Y+KCG V A +IF
Sbjct: 410 IFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFN 469
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ R I+S+N++I+ F+Q+G A+ LF M++E + P+ TF+ +LS+C+ +GLV E
Sbjct: 470 STRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAE 529
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G YFK MKT YN+EP EHY CMVD+ RAG ++A+ I++M +P VW ALL +
Sbjct: 530 GCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASC 589
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H NLDL ++AA+ ++E++P+ +PY++LS +++ I + R R +++RK G
Sbjct: 590 RVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLLDFQQLRKDVG 649
Query: 571 CSWI 574
S +
Sbjct: 650 SSQL 653
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 222/482 (46%), Gaps = 57/482 (11%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA--FNSI 169
Y +G + +AR +FD+MP +NVV+W+ ++ ++ D LF M RGG NS
Sbjct: 47 YQARGHLADARGVFDEMPRRNVVSWSVLIVASSRLGVLGDALSLFAGMLRGGERDRPNSF 106
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T+ L C R G QVH + G D D + +++ MY + G + + + F +
Sbjct: 107 TVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLT 166
Query: 230 SKRDAVSWNSLISGYVHNGEI---EEAYRLFERM-------------------------- 260
+R +SW S+I+ V++G+ + A LF++M
Sbjct: 167 PQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLP 226
Query: 261 PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
GK D T ++ + G +++ L + D + T++++ +
Sbjct: 227 SGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYA 285
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EA R F +ML + +Q ++S+L ++ L +IH + +K D
Sbjct: 286 RNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTL 345
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ N++V++Y KCG++ + +F ++ ++ +S+ ++++ + QN L +EAL FR+M +G
Sbjct: 346 LLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKG 405
Query: 428 LVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
L + SVL AC+ + G+ I+ + +K + + E+ +V + + G +
Sbjct: 406 LESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENA--LVTMYAKCGVVQV 463
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A+ + NS T W AL+ + H N ++AA L ++ + +V D Y+
Sbjct: 464 ALKIFNS-TRNRGIISWNALITSFSQHGN----EVAAIQLFDMMQEE----MVCPDDYTF 514
Query: 547 IG 548
+G
Sbjct: 515 VG 516
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 166/374 (44%), Gaps = 28/374 (7%)
Query: 11 AMITALIN--NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA-----EELYVN 63
A+ TAL+ C + A +A S +++T + R G EA + L +
Sbjct: 245 ALGTALLAMYGRCGGMDEITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGH 304
Query: 64 MPARWRD-----SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
MP VCS+ G L+V + E + D + ++V Y K G +
Sbjct: 305 MPIDQSAITSLLQVCSSL---GQLRVVK-EIHCYALKNFFRLDTLLLNAIVTVYGKCGDI 360
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+ +F+ + K+ ++WTA++ Y++ D ++ F M R G+ + +T + AC
Sbjct: 361 ASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRAC 420
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G Q+H V + G D D + N+++TMY + G + A K+F+ R +SWN
Sbjct: 421 SATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWN 480
Query: 239 SLISGYVHNGEIEEAYRLF----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+LI+ + +G A +LF E M D ++ +++ S G + + E F M K
Sbjct: 481 ALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTK 540
Query: 295 DDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
++ +T ++ F ++ +A ++ M +P+QL ++L++ L+
Sbjct: 541 YNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAM---PCQPDQLVWEALLASCRVHGNLDL 597
Query: 350 GSQIHAHVVKMNME 363
G ++++ E
Sbjct: 598 GRMAAKKILEIKPE 611
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 135/288 (46%), Gaps = 11/288 (3%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR---KDV 327
++ + ++G+L + +F+ MP ++ V+W+ +I +A F MLR +D
Sbjct: 43 LLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRLGVLGDALSLFAGMLRGGERD- 101
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
RPN T++++++ A G Q+HA VK+ ++ D S+ +LV +Y+KCG V ++R
Sbjct: 102 RPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWR 161
Query: 388 IFTNIDERNIVSYNSMISGFAQN---GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
F +R+++S+ SMI+ + G + A+ LF+KM + P TF +L +
Sbjct: 162 AFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDV 221
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
L+ G + + E P ++ + GR G + E L + +
Sbjct: 222 PELLPSGKQVHGCLVKM-GTEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFSRT-- 278
Query: 505 ALLGA-GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
+LL A R N++ ++ LM P + L + S +G+ R
Sbjct: 279 SLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLR 326
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H VK+ + + N+L+ Y G++ DA +F + RN+VS++ +I ++ G+
Sbjct: 24 VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRLGV 83
Query: 413 GEEALNLFRKMKDEGL--VPNQITFLSVLSAC 442
+AL+LF M G PN T ++++ C
Sbjct: 84 LGDALSLFAGMLRGGERDRPNSFTVAALVAGC 115
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 200/628 (31%), Positives = 319/628 (50%), Gaps = 72/628 (11%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSV------------ 72
A + MP NAVS+ +I + R G + E + AR R S
Sbjct: 65 HARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETF----ARARRSAGVRADRFTYAAA 120
Query: 73 ---CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
CS A G L+ G+ A + E + V S+V Y + G + +AR++FD
Sbjct: 121 LAACSRA---GRLREGKAVHALSVLEG-IAGGVFVSNSLVSMYARCGDMGQARQVFDAAD 176
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYRE-G 187
E++ V+W A+V GY++ +D +F MRR G+ NS L + + C G +
Sbjct: 177 ERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIA 236
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
VHG V + GFD D+ L ++++ MY + G + EA +F + + V +N++I+G +
Sbjct: 237 AAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRD 296
Query: 248 -----------------------------------------GEIEEAYRLFERM-----P 261
G+IE ++ ++
Sbjct: 297 EAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQ 356
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G DF+ + +I + + G +E F +P++D VTWTA+ISG V NE +E A F E
Sbjct: 357 GDDFIG-SALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHE 415
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
+L ++P+ T+SSV++A A+ A G QI K ++ NS + +Y++ G+
Sbjct: 416 LLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGD 475
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
V A R F ++ +IVS++++IS AQ+G +AL F +M D +VPN+ITFL VL+A
Sbjct: 476 VHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTA 535
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C+H GLV+EG Y+++MK Y + P +H C+VD+LGRAG LA+A I F P
Sbjct: 536 CSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPV 595
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
+W +LL + R H +++ +L A +MEL+P S+ YV L ++Y G+ +++R K
Sbjct: 596 IWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMK 655
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ ++K PG SWI L+ VH F+AG KS
Sbjct: 656 ERGVKKEPGLSWIELRSGVHSFVAGDKS 683
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 190/409 (46%), Gaps = 50/409 (12%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A I A + +++ YC+ G AR + D+MP N V++ ++D Y + E
Sbjct: 38 AHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNAVSFNLLIDAYSRAGQPE 95
Query: 151 DGFDLFLSMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
+ F RR G+ + T AC R R REG VH L G + + NS+
Sbjct: 96 ASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSL 155
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------- 260
++MY R G M +A +VF +RD VSWN+L+SGYV G ++ R+F M
Sbjct: 156 VSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNS 215
Query: 261 ---------------PGKDFVS-----------------WTTMITGFSSKGNLEKSIELF 288
P D + + M+ ++ KG L +++ LF
Sbjct: 216 FALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALF 275
Query: 289 NMMPEKDDVTWTAIISGFVNNEQ------YEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+ + + V + A+I+G +E EA + E+ + + P + T SSV+ A
Sbjct: 276 KSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACN 335
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ G QIH V+K + D I ++L+ LY G + D +R FT++ ++++V++ +
Sbjct: 336 LAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTA 395
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
MISG QN L E AL LF ++ GL P+ T SV++AC + + G
Sbjct: 396 MISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTG 444
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 164/415 (39%), Gaps = 67/415 (16%)
Query: 9 YNAMITALINNNCSI-----YEAFEIFATMPMR---------NAVSYAAMITGFVRRGMF 54
+NAMI L + ++ EA +++ + R ++V A + G + G
Sbjct: 286 FNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQ 345
Query: 55 YEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+ L D +ALI YL G E+ R F ++ ++DVV W
Sbjct: 346 IHGQVLKHCFQG---DDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWT-------- 394
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
AM+ G ++ + FE LF + G+ + T++ +
Sbjct: 395 -----------------------AMISGCVQNELFERALTLFHELLGAGLKPDPFTISSV 431
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
AC R G Q+ ++ GF +GNS I MY R G + A + F M D
Sbjct: 432 MNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDI 491
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGNLEKSIELFNM 290
VSW+++IS + +G +A R F M V ++ ++T S G +++ ++ +
Sbjct: 492 VSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYET 551
Query: 291 MPEK-------DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL-SSVLSASA 342
M E+ T + G EAF +R + ++ + S+L++
Sbjct: 552 MKEEYALSPTIKHCTCVVDLLGRAGRLADAEAF------IRDSIFHDEPVIWRSLLASCR 605
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+ +G + ++++ S S N L ++Y G + A +I + ER +
Sbjct: 606 IHRDMERGQLVADRIMELQPSSSASYVN-LYNIYLDAGELSLASKIRDVMKERGV 659
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+ +HAH+V+ + + ++N+L++ Y + G A R+ + N VS+N +I ++
Sbjct: 32 HAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNAVSFNLLIDAYS 89
Query: 409 QNGLGEEALNLF-RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
+ G E +L F R + G+ ++ T+ + L+AC+ G + EG ++ L I G
Sbjct: 90 RAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKA-VHALSVLEGIAGG 148
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+V + R G + +A + ++ E W AL+
Sbjct: 149 VFVSNSLVSMYARCGDMGQARQVFDAAD-ERDDVSWNALV 187
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 186/552 (33%), Positives = 304/552 (55%), Gaps = 16/552 (2%)
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
+C A + V+ ++ +V+ Y G V +R FD++P+K+V AW +M+ Y+
Sbjct: 35 AKCLHALLVVAGKVQSIFIS-TRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93
Query: 145 KVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
F + F + + + T + +ACG +G ++H + GF +++
Sbjct: 94 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRKIHCWAFKLGFQWNV 150
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE--RMP 261
+ S+I MY R GF A +F M RD SWN++ISG + NG +A + + R+
Sbjct: 151 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 210
Query: 262 G--KDFVSWTTMITGF----SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
G +FV+ +++ F + G L+ + ++F ++P KD ++W +I+G+ N EA
Sbjct: 211 GIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEA 270
Query: 316 FRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
+ M K++ PNQ T S+L A A L QG +IH V+K N+ DV + L+
Sbjct: 271 IEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLID 330
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y KCG +VDA +F + + + V++N++IS +G E+ L LF +M DEG+ P+ +T
Sbjct: 331 VYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVT 390
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F+S+LSAC+H G VEEG F+ M+ Y I+P +HY CMVD+LGRAG L A D I M
Sbjct: 391 FVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDM 449
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
+P +WGALLGA R H N++L K A+ L E++ + YV+LS++Y+ +GK +
Sbjct: 450 PLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVD 509
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-P 613
+VR + + ++K+PG S I + KV +F G +S KEI L+ ++ K + P
Sbjct: 510 KVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIP 569
Query: 614 KHDWSLLGLERD 625
+ + L +E D
Sbjct: 570 DYSFVLQDVEED 581
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 127/283 (44%), Gaps = 50/283 (17%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----SVCS--NALIS 79
A +F MP R+ S+ AMI+G ++ G +A ++ M +V S +
Sbjct: 169 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVD 228
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE-----KNVV 134
Y K+G + A ++FE + KDV++W +++ GY + G EA E++ M E N
Sbjct: 229 MYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQG 288
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W +++ Y V + +G+++HG V
Sbjct: 289 TWVSILPAYAHVGALQ-----------------------------------QGMKIHGRV 313
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ D+ + +I +YG+ G + +A +F + + +V+WN++IS + +G E+
Sbjct: 314 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 373
Query: 255 RLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
+LF M + D V++ ++++ S G +E+ F +M E
Sbjct: 374 KLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE 416
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 131/309 (42%), Gaps = 52/309 (16%)
Query: 1 MADRTSASYNAMITALINNN------------------------CSIYEAF--------- 27
M R S+NAMI+ LI N SI F
Sbjct: 176 MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGL 235
Query: 28 -----EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN----ALI 78
++F +P+++ +S+ +ITG+ + G+ EA E+Y M ++ + + +++
Sbjct: 236 LDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSIL 294
Query: 79 SGYLKVGRCEEA----ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
Y VG ++ R+ + + DV ++D Y K GR+++A +F ++P+++ V
Sbjct: 295 PAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV 354
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W A++ + E LF M G+ + +T L AC EG L+
Sbjct: 355 TWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM 414
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEIE-- 251
+G + ++ + GR G+++ A + + M + DA W +L+ +G IE
Sbjct: 415 QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELG 474
Query: 252 --EAYRLFE 258
+ RLFE
Sbjct: 475 KFASDRLFE 483
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 192/583 (32%), Positives = 320/583 (54%), Gaps = 16/583 (2%)
Query: 33 MPMRNAVSYAAMITGFVRRGM-------FYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
MP RNAV++ +MI G+V+ G+ FYE E V S S + G L+ G
Sbjct: 160 MPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDG 219
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
+ A + +E S+++ Y K G + +A +F +M EK+VV W ++ GY++
Sbjct: 220 KQGHAIAVI-CGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQ 278
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
+ + ++ MR + F+S+TL L A + G + H R + D+++
Sbjct: 279 IGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVV 338
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP---- 261
+SI+ MY + + A +VF+ +D + WN++++ + G EA LF +M
Sbjct: 339 VSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESV 398
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAIISGFVNNEQYEEAFR 317
+ +SW ++I GF + G + ++ ++F M + + VTWT +ISG + EA
Sbjct: 399 PPNVISWNSLILGFLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAIL 458
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F M V+PN +++ VL A A+L G +H ++++ ++ + I SLV +Y+
Sbjct: 459 TFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYA 518
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
KCG+ A R+F I ++ + YN+MISGFA +G EAL L+R +K+EGL P+ ITF +
Sbjct: 519 KCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTN 578
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
L AC+H +V EG F M + +NI P EHY CMV +L R G L EA LI++M ++
Sbjct: 579 ALYACSHAMMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYK 638
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
P + G+LL A R H ++L + + L++L+PD++ YV +S+ Y+ G+ + +VR
Sbjct: 639 PDVQILGSLLAACREHNKIELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVR 698
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
K + +RK PGCSWI + +++++F+AG KS + +EI TL
Sbjct: 699 QLMKERGLRKIPGCSWIQVGEELNVFVAGDKSHPETEEIYTTL 741
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 226/482 (46%), Gaps = 64/482 (13%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
+ +F ++ KNV +W A++ + +++ F M+ G+ ++ L + +ACG
Sbjct: 66 SNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGG 125
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
R G VHGLVS G+ + ++ K M +R+AV+WNS+
Sbjct: 126 LEWIRIGKVVHGLVS-CGYVW-------------KMWGGGGCKKGVCGMPQRNAVAWNSM 171
Query: 241 ISGYVHNGEIEEAYRLFERM------PGK----DFVS----------------------- 267
I GYV NG EEA +F M P + F+S
Sbjct: 172 IVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGI 231
Query: 268 ------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+++I +S G +E + +F+ M EKD VTW +ISG+V + ++A
Sbjct: 232 EMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHL 291
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M +++R + +TL++++SA A L G + H + ++ N+ESDV + +S+V +Y+KC
Sbjct: 292 MRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEK 351
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ A R+F + ++++ +N+M++ FA+ G EALNLF +M+ E + PN I++ S++
Sbjct: 352 IGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILG 411
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT---FEP 498
+ G V E F M++L ++P + ++ L R+G EAI M +P
Sbjct: 412 FLNSGQVNEAKDMFLQMQSL-GVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKP 470
Query: 499 PP----GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
GV A + + L +H + L AT V D+Y+ G +
Sbjct: 471 NVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLV---DMYAKCGDRDQAK 527
Query: 555 RV 556
RV
Sbjct: 528 RV 529
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 32/282 (11%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T ++ ++ N E S LF + K+ +W A+I Y+EA F EM +
Sbjct: 51 TKLVIFYAKCDNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLL 110
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV------ 382
P+ L +VL A + G +H V CG V
Sbjct: 111 PDNFVLPNVLKACGGLEWIRIGKVVHGLV--------------------SCGYVWKMWGG 150
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ + +RN V++NSMI G+ QNGL EEA+ +F +M++EG+ P Q+T S LSA
Sbjct: 151 GGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSAS 210
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
++G +++G ++ + IE + +++ + G + +A + + M E
Sbjct: 211 ANLGALQDG-KQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRM-LEKDVVT 268
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEP---DSATPYVVLS 541
W LL +G + L HLM LE DS T ++S
Sbjct: 269 WN-LLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMS 309
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN--MESDVSIQNSLVSLYSKCGNV 382
K++R +L L+ G QIHA +VK + I+ LV Y+KC N
Sbjct: 4 KNLRIGPEVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNP 63
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ +F + +N+ S+ ++I + G +EAL F++M++ GL+P+ +VL AC
Sbjct: 64 EASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKAC 123
Query: 443 NHV----------GLVEEGFIY 454
+ GLV G+++
Sbjct: 124 GGLEWIRIGKVVHGLVSCGYVW 145
>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
Length = 811
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 324/582 (55%), Gaps = 24/582 (4%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVC--SNA 76
+A ++F +P RN V++ A++ G+V+ GM EA L+ +M P R S C ++A
Sbjct: 206 DARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASA 265
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+ G ++ G+ A I + E D + S+++ YCK G + A +FD+M +K+VV W
Sbjct: 266 NMVG-VEEGKQSHAIAIVNGL-ELDNILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTW 323
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
++ GY++ ED + MR + ++ +TL+ L A R + G +V R
Sbjct: 324 NLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCYCIR 383
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
D DI+L ++ + MY + G + +A KVF ++D + WN+L++ Y +G EA RL
Sbjct: 384 HSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGLSGEALRL 443
Query: 257 F-----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFV 307
F E +P + ++W +I G + ++ E+F M + ++WT +++G V
Sbjct: 444 FYEMQLESVP-PNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGISPNLISWTTMMNGMV 502
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDV 366
N EEA + +M +RPN +++ LSASA A+L+ G IH ++++ + S V
Sbjct: 503 QNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRNLRHSSSV 562
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
SI+ SLV +Y+KCG++ A R+F + + YN+MIS +A G +EA+ L+R ++D
Sbjct: 563 SIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAIALYRSLEDM 622
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G+ P+ +TF S+LSACNH G +++ F +M + + P EHY MVD+L AG +
Sbjct: 623 GIKPDSVTFTSLLSACNHAGDIDQAVGVFTAMVLKHGMTPCLEHYGLMVDLLASAGETEK 682
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
AI LI M ++P + +L+ + +L + ++HL+E EP+++ YV +S+ Y+V
Sbjct: 683 AIRLIEEMPYKPDARMIQSLVASCNKQHKTELVEYLSRHLLESEPENSGNYVTISNAYAV 742
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILK---DKVHLFLA 585
G + ++R K K ++K PGCSWI +K + VH+F+A
Sbjct: 743 EGSWDEVVKMREMMKAKGLKKKPGCSWIQIKGEEEGVHVFVA 784
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 254/529 (48%), Gaps = 64/529 (12%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+S SY +++L N I EA + M RN I G +G YE
Sbjct: 14 SSTSYFHRVSSLCKNG-EIKEALSLVTEMDFRNX-RIGPEIYGEXLQGCVYE-------- 63
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
RD + + LK G + AR +E +V + Y K + A I
Sbjct: 64 ----RDLSTGKQIHARILKNG--DFYAR--NEYIETKLVIF------YAKCDALEXAEVI 109
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F K+ +NV +W A++ ++ E F+ M + ++ + + +ACG
Sbjct: 110 FSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWS 169
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R G VHG V + G + + + +S+ MYG+ G +D+A KVF + +R+ V+WN+L+ GY
Sbjct: 170 RFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGY 229
Query: 245 VHNGEIEEAYRLFERM--------------------------PGK-------------DF 265
V NG EEA RLF M GK D
Sbjct: 230 VQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDN 289
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ T+++ + G +E + +F+ M +KD VTW +ISG+V E+A M +
Sbjct: 290 ILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLE 349
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++ + +TLS+++SA+A T L G ++ + ++ ++++D+ + ++ + +Y+KCG++VDA
Sbjct: 350 KLKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDA 409
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F + E++++ +N++++ +AQ+GL EAL LF +M+ E + PN IT+ ++ +
Sbjct: 410 KKVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRN 469
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
G V E F M++ I P + M++ + + G EAI + M
Sbjct: 470 GEVNEAKEMFLQMQS-SGISPNLISWTTMMNGMVQNGCSEEAILFLRKM 517
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 150/577 (25%), Positives = 260/577 (45%), Gaps = 96/577 (16%)
Query: 21 CSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSV 72
C E E IF+ + +RN S+AA+I R G+ A +V M P + +V
Sbjct: 100 CDALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNV 159
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
C + + GR + +A +E V S+ D Y K G + +AR++FD++PE+N
Sbjct: 160 CKACGALQWSRFGRGVHG-YVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERN 218
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VVAW A++ GY++ E+ LF MR+ G+ +T++ A EG Q H
Sbjct: 219 VVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHA 278
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ G + D ILG S++ Y ++G ++ A VF M +D V+WN LISGYV G +E+
Sbjct: 279 IAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVED 338
Query: 253 AYRLFERMP--------------------------GK-------------DFVSWTTMIT 273
A + + M GK D V +T +
Sbjct: 339 AIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMD 398
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G++ + ++F+ EKD + W +++ + + EA R F EM + V PN +T
Sbjct: 399 MYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVIT 458
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ ++ + +N+ ++ + +Q+S +S
Sbjct: 459 WNLIILSLLRNGEVNEAKEMF-----------LQMQSSGIS------------------- 488
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLV 448
N++S+ +M++G QNG EEA+ RKM++ GL PN + LSA H G
Sbjct: 489 -PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASLHFGRS 547
Query: 449 EEGFIYFKSMK--TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
G+I ++++ + +IE +VD+ + G + +A + S + P ++ A+
Sbjct: 548 IHGYI-IRNLRHSSSVSIETS------LVDMYAKCGDINKAERVFGSKLYSELP-LYNAM 599
Query: 507 LGAGRTHLNLDLAKLAAQHL--MELEPDSATPYVVLS 541
+ A + N+ A + L M ++PDS T +LS
Sbjct: 600 ISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLS 636
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/454 (36%), Positives = 268/454 (59%), Gaps = 23/454 (5%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F+ + + V W + GY + LF+ M+R + T L +AC +
Sbjct: 127 VFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCG 186
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+EGV HG R G D+ + S+I +YG+ G + A KVF M +R+ VSW ++I+G
Sbjct: 187 VKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAG 246
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE--KDDVTWTA 301
Y ++ EA +LF+ MP K+ VSW +I+G+ G+L + ++F+ MP +D V W+A
Sbjct: 247 YASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSA 306
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+ISG +V+P++ + S++SA + +L + +V K +
Sbjct: 307 LISG--------------------NVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSS 346
Query: 362 ME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
++ + +L+ + +KCG++ A ++F + +R+++SY SM+ G + +G G +A++LF
Sbjct: 347 IDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLF 406
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M +EGL P+ + F +L+AC+ GLV+EG YF+SMKT Y+I P P+HYACMVD+LGR
Sbjct: 407 SRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGR 466
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA +L+ SM EP G WGALLGA + H +++L ++ A L ELEP +A YV+L
Sbjct: 467 AGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLL 526
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
S++Y+ + D + +R K + + IRK PGCSWI
Sbjct: 527 SNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 560
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 113/235 (48%), Gaps = 18/235 (7%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+LI Y K G A ++F+ M E++VV+W +M+ GY ++EAR++FD+MPEKN V
Sbjct: 210 TSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAV 269
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRR-------------GGMAFNSITLTILFEACGRF 181
+W A++ GY+K +F M G + + + L AC +
Sbjct: 270 SWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALISGNVKPDEFIMVSLMSACSQM 329
Query: 182 FRYREGVQVHGLVSRFGFD-YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
V V + D + + ++I M + G MD A K+F M KRD +S+ S+
Sbjct: 330 GSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSM 389
Query: 241 ISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
+ G +G +A LF RM + D V++T ++T S G +++ F M
Sbjct: 390 MQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESM 444
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 4/228 (1%)
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY-RLFERMP 261
I L + I Y L F D + ++ S S ++L+ +E+ + R+ +
Sbjct: 45 IFLPMTFIRRYTALTFPD---YLPTLRSFDTTSSISTLLKACTTTSTLEQVHARIIRKGL 101
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+D + +T +S N + +FN + V W I G+ N FI
Sbjct: 102 HQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIR 161
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M R D P++ T S++ A + + +G H V+ + DV + SL+ LY KCG
Sbjct: 162 MKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGE 221
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
++ A ++F + ERN+VS+ +MI+G+A EA LF +M ++ V
Sbjct: 222 ILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAV 269
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 136/290 (46%), Gaps = 33/290 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+ AMI + + + EA ++F MP +NAVS+ A+I+G+V+ G A ++
Sbjct: 232 MGERNVVSWTAMIAGYASFS-DLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKM 290
Query: 61 YVNMPARWRDSVCSNALISGYLK---------VGRCE-----EAARIFEAMVEKDVV--- 103
+ MP R RD V +ALISG +K + C E A+ + V K +
Sbjct: 291 FDEMPHRNRDVVAWSALISGNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVH 350
Query: 104 ---AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
+++D K G + A ++F++MP+++++++ +M+ G C LF M
Sbjct: 351 RAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRML 410
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG----NSIITMYGRL 216
G+ + + T++ AC R EG DY I+ ++ + GR
Sbjct: 411 NEGLTPDDVAFTVILTACSRAGLVDEGCY---YFESMKTDYSIVPSPDHYACMVDLLGRA 467
Query: 217 GFMDEANKVF-SMMSKRDAVSWNSLISGYVHNGEIE----EAYRLFERMP 261
G + EA ++ SM + A +W +L+ + +IE A +LFE P
Sbjct: 468 GRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEP 517
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
++S++L A T+TL Q +HA +++ + D I + ++L + N +F +
Sbjct: 75 SISTLLKACTTTSTLEQ---VHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGV 131
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+ V +N+ I G+++N ++LF +MK VP++ T+ S++ AC+ V V+EG
Sbjct: 132 SSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEG- 190
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ F + ++D+ G+ G + A + + M
Sbjct: 191 VAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEM 232
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 208/682 (30%), Positives = 326/682 (47%), Gaps = 116/682 (17%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I +A E+F M R+ ++ M++G+ G EA EL+ +R + ++LISGY
Sbjct: 131 IDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSIT--WSSLISGYC 188
Query: 83 KVGRCEEAARIFEAM---------------------------------------VEKDVV 103
+ GR EA +F+ M E +V
Sbjct: 189 RFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVY 248
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMP--EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
+VD Y K + EA +F + + N V WTAMV GY + + F M
Sbjct: 249 VVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHT 308
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
G+ N T + AC + G QVHG + R GF + + ++++ MY + G +
Sbjct: 309 EGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGS 368
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF---------------- 265
A +V M D VSWNS+I G V +G EEA LF++M ++
Sbjct: 369 AKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIV 428
Query: 266 -------VSWTTMITGF--------------SSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
V + TGF + +L + +F M EKD ++WT++++
Sbjct: 429 GRIDGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVT 488
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G+ N +EE+ + F +M V P+Q ++S+LSA A L G Q+H+ +K+ + S
Sbjct: 489 GYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRS 548
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
+S+ NSLV++Y+KCG + DA IF ++ R+++++ ++I G+A+NG G ++L
Sbjct: 549 SLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLK------ 602
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
YF+ MK +Y IEPGPEHYACM+D+ GR G L
Sbjct: 603 -----------------------------YFQQMKKIYGIEPGPEHYACMIDLFGRLGKL 633
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA +++N M +P VW ALL A R H NL+L + AA +L ELEP +A PYV+LS++Y
Sbjct: 634 DEAKEILNQMDVKPDATVWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMY 693
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
K D ++R K K I K PGCSWI + ++H F++ + EI + I
Sbjct: 694 LAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEII 753
Query: 605 KGTKEFDW-PKHDWSLLGLERD 625
+ KE + P ++SL ++R+
Sbjct: 754 RRIKEVGYVPDMNFSLHDMDRE 775
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 135/545 (24%), Positives = 250/545 (45%), Gaps = 49/545 (8%)
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
N+ ++ SN L++G K G+ ++A +F+ M+++D W +MV GY GR++EAR
Sbjct: 107 NIADSYQSIFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEAR 166
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
E+F+ ++ + W++++ GY + + FDLF MR G + TL + C
Sbjct: 167 ELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALG 226
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS--KRDAVSWNSL 240
++G +HG V + GF+ ++ + ++ MY + + EA +F ++ K + V W ++
Sbjct: 227 LIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAM 286
Query: 241 ISGYVHNGEIEEAYRLFERMP--------------------------------------- 261
++GY NG+ +A F M
Sbjct: 287 VTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGF 346
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G + + ++ ++ G+L + + M + D V+W ++I G V + EEA F +
Sbjct: 347 GCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKK 406
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M ++++ + T SVL+ G +H V+K E+ + N+LV +Y+K +
Sbjct: 407 MHARNMKIDHYTFPSVLNCCIVGRI--DGKSVHCLVIKTGFENYKLVSNALVDMYAKTED 464
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ AY +F + E++++S+ S+++G+ QNG EE+L F M+ G+ P+Q S+LSA
Sbjct: 465 LNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSA 524
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C + L+E G L + +V + + G L +A + SM
Sbjct: 525 CAELTLLEFGKQVHSDFIKL-GLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVI- 582
Query: 502 VWGALL-GAGRTHLNLDLAKLAAQ--HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
W AL+ G R D K Q + +EP Y + DL+ +GK + +
Sbjct: 583 TWTALIVGYARNGKGRDSLKYFQQMKKIYGIEP-GPEHYACMIDLFGRLGKLDEAKEILN 641
Query: 559 KKKLK 563
+ +K
Sbjct: 642 QMDVK 646
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 174/539 (32%), Positives = 285/539 (52%), Gaps = 70/539 (12%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD++P + + + Y ++ + F+SM + + T+ +F++C
Sbjct: 49 ARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCAS 108
Query: 181 FFRYREGVQVHGLVSRFGFDY-------------------------------DIILGNSI 209
G QVH LV R+GF D I N +
Sbjct: 109 LLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCL 168
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-------- 261
I+ Y R G + A ++F M R VSWN++IS Y NG+ + + +F+RM
Sbjct: 169 ISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNE 228
Query: 262 -------------------------------GKDFVSWTTMITGFSSKGNLEKSIELFNM 290
G + + T M+ + G ++ +F+
Sbjct: 229 ITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDH 288
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M +D VTW+A+I+G+ N + EA F M ++PN +TL SVLSA A ++ G
Sbjct: 289 MARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETG 348
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
+I ++V + S+V + ++L+ +YSKCGN++ A +IF + +R+ V++NSMI G A N
Sbjct: 349 ERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAIN 408
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
G E+A+ L+ +MK+ + PN ITF+ +++AC H G VE G +F+SM++ +NI P EH
Sbjct: 409 GFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEH 468
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE 530
+AC+VD+ R+G L +A + I M EP +WG LL A R HLN++LA+LA + L+ELE
Sbjct: 469 FACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELE 528
Query: 531 PDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
PD++ YV+LS++Y+ G+ ++ +VR K KR++K+ SW+ ++D+VH FL G S
Sbjct: 529 PDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTS 587
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 182/379 (48%), Gaps = 49/379 (12%)
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
C NALI+ Y K+ A IF+ ++ KD +A+ ++ Y + G V+ ARE+FDKM +++
Sbjct: 133 CQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRS 192
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+V+W AM+ Y + + G+ +F M+ N ITL + C + G+++
Sbjct: 193 IVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKK 252
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
L ++I+ +++ MY + G +D+ VF M++RD V+W+++I+GY NG E
Sbjct: 253 LNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNE 312
Query: 253 AYRLFERMPGKDF----VSWTTMITG---------------------------------- 274
A LFE M V+ ++++
Sbjct: 313 ALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLG 372
Query: 275 -FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
+S GN+ K+ ++F+ +P++D+VTW ++I G N E+A + M +V+PN +T
Sbjct: 373 MYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNIT 432
Query: 334 LSSVLSASAATATLNQG-----SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+++A + G S H + N+E I V L+ + G ++DAY
Sbjct: 433 FVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACI----VDLFCRSGRLIDAYEF 488
Query: 389 FTNID-ERNIVSYNSMISG 406
++ E N+V + +++S
Sbjct: 489 ICRMEVEPNVVIWGTLLSA 507
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 180/357 (50%), Gaps = 27/357 (7%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
+ + +YN +I+A + + + A E+F M R+ VS+ AMI+ + + G +++ ++
Sbjct: 160 KDTIAYNCLISAY-SRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIF-- 216
Query: 64 MPARWRDSVCS------NALISGYLKVGRCEEAARIFEAMVEKDV----VAWGSMVDGYC 113
R +D +C ++S K+G E RI + K++ + +M++ Y
Sbjct: 217 --QRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYV 274
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G V + R +FD M ++VV W+AM+ GY + + +LF +M+ + N +TL
Sbjct: 275 KCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVS 334
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ AC + G ++ V G ++ + ++++ MY + G + +A ++F + +RD
Sbjct: 335 VLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRD 394
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFN 289
V+WNS+I G NG E+A L+ RM + +++ ++T + G++E +E F
Sbjct: 395 NVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFR 454
Query: 290 MMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
M +++ + I+ F + + +A+ + + R +V PN + ++LSAS
Sbjct: 455 SMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEF---ICRMEVEPNVVIWGTLLSAS 508
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 185/584 (31%), Positives = 321/584 (54%), Gaps = 40/584 (6%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG-------------------- 116
L+S Y G +E R+F+ M +K+V W MV Y K G
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
R A E+FDK+ +++V++W +M+ GY+ E G ++ M G+ + T+ +
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
C + G VH L + F+ I N+++ MY + G +D A +VF M +R+ VS
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP 292
W S+I+GY +G + A L ++M + D V+ T+++ + G+L+ ++ + +
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 241
Query: 293 EKDDVT----WTAIISGFVNNEQYEEAFRWFIEMLRKDV----------RPNQLTLSSVL 338
+ + A++ + E A F M+ KD+ +P+ T++ +L
Sbjct: 242 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACIL 301
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A A+ + L +G +IH ++++ SD + N+LV LY KCG + A +F I +++V
Sbjct: 302 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 361
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+ MI+G+ +G G EA+ F +M+D G+ P++++F+S+L AC+H GL+E+G+ +F M
Sbjct: 362 SWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM 421
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
K +NIEP EHYACMVD+L R G+L++A I ++ P +WGALL R + +++L
Sbjct: 422 KNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIEL 481
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
A+ A+ + ELEP++ YV+L+++Y+ K + R+R K K +RK+PGCSWI +K
Sbjct: 482 AEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKG 541
Query: 579 KVHLFLAGRKSCL-DLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
+V+LF++G S K+IE L+ + + KE + PK ++L+
Sbjct: 542 RVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALI 585
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 207/477 (43%), Gaps = 82/477 (17%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALI 78
A E+F + R+ +S+ +MI+G+V G+ +Y M D SV
Sbjct: 66 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAK 125
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
SG L +G+ + I ++ E+ + +++D Y K G + A +F+KM E+NVV+WT+
Sbjct: 126 SGTLSLGKAVHSLAI-KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 184
Query: 139 MVDGYMKVDCFEDGFDLFL-SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
M+ GY + D + DG + L M + G+ + + +T + AC R G VH +
Sbjct: 185 MIAGYTR-DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 243
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS------------------ 239
++ + N+++ MY + G M+ AN VFS M +D +SWN+
Sbjct: 244 NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPA 303
Query: 240 -------------------------------LISGYVHNGEIEEAYRLFERMPGKDFVSW 268
L+ YV G + A LF+ +P KD VSW
Sbjct: 304 CASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSW 363
Query: 269 TTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
T MI G+ G ++I FN M E D+V++ +I+ ++ E+ +R+F M
Sbjct: 364 TVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKN 423
Query: 325 K-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
++ P + ++ + T L S+ + + + + D +I +L+ CG +
Sbjct: 424 DFNIEPKLEHYACMVDLLSRTGNL---SKAYKFIETLPIAPDATIWGALL-----CGCRI 475
Query: 384 ---------DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
A R+F ++ N Y + + +A+ EE + K+ +GL N
Sbjct: 476 YHDIELAEKVAERVF-ELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKN 531
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 206/666 (30%), Positives = 342/666 (51%), Gaps = 60/666 (9%)
Query: 14 TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
T L++ C S+ EA +F + + V Y M+ GF + +A + +V M R+ D
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM--RYDD 130
Query: 71 ------------SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
VC + L+VG+ E + ++ D+ A + + Y K +V
Sbjct: 131 VEPVVYNFTYLLKVCGD---EAELRVGK-EIHGLLVKSGFSLDLFAMTGLENMYAKCRQV 186
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EAR++FD+MPE+++V+W +V GY + ++ SM + + IT+ + A
Sbjct: 187 NEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAV 246
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G ++HG R GFD + + +++ MY + G ++ A ++F M +R+ VSWN
Sbjct: 247 SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWN 306
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK-------SIEL 287
S+I YV N +EA +F++M + VS + + G+LE+ S+EL
Sbjct: 307 SMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366
Query: 288 ----------------------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
F + + V+W A+I GF N + +A +F
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF 426
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+M + V+P+ T SV++A A + + IH V++ ++ +V + +LV +Y+KC
Sbjct: 427 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G ++ A IF + ER++ ++N+MI G+ +G G+ AL LF +M+ + PN +TFLSV+
Sbjct: 487 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVI 546
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
SAC+H GLVE G F MK Y+IE +HY MVD+LGRAG L EA D I M +P
Sbjct: 547 SACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA 606
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
V+GA+LGA + H N++ A+ AA+ L EL PD +V+L+++Y +VR+
Sbjct: 607 VNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVS 666
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSL 619
+ +RK+PGCS + +K++VH F +G + D K+I L+ + KE + +
Sbjct: 667 MLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV 726
Query: 620 LGLERD 625
LG+E D
Sbjct: 727 LGVEND 732
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 163/322 (50%), Gaps = 43/322 (13%)
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+L E C R Q+ LV + G + +++++ R G +DEA +VF + +
Sbjct: 42 LLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 98
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMP--------------------------GK--- 263
V +++++ G+ ++++A + F RM GK
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 264 ----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
D + T + ++ + ++ ++F+ MPE+D V+W I++G+ N
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A M ++++P+ +T+ SVL A +A ++ G +IH + ++ +S V+I +LV
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y+KCG++ A ++F + ERN+VS+NSMI + QN +EA+ +F+KM DEG+ P +
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 434 TFLSVLSACNHVGLVEEG-FIY 454
+ + L AC +G +E G FI+
Sbjct: 339 SVMGALHACADLGDLERGRFIH 360
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 187/623 (30%), Positives = 309/623 (49%), Gaps = 71/623 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R+ SY M+ AL+ + EA E++ P + + A I+GFVR + + A +
Sbjct: 178 MPERSVVSYTTMVDALMKRG-RVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGV 236
Query: 61 YVNMPARWRDS-----VC---------------------------------SNALISGYL 82
+ M + VC N+LI+ YL
Sbjct: 237 FRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYL 296
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
++G A ++F+ M KDVV+W +++D Y + G + AR + D MPE+N V+W ++
Sbjct: 297 RMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIAR 356
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + + L+ M G N + + AC R G ++H + G +
Sbjct: 357 HEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTN 416
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ + +S+I MY + + +A +F+ +P
Sbjct: 417 VFVSSSLIDMYCKCK-------------------------------KCRDAQTIFDTLPE 445
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K+ V W ++ +G+S G + +++ LF MP ++ +W IISG+ N Q+ +A R F M
Sbjct: 446 KNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAM 505
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L P ++T SSVL A A +L G HA +K+ ME + I +L +Y+K G++
Sbjct: 506 LASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDL 565
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ R+F + ERN V++ +MI G A+NGL EE++ LF M G+ PN+ TFL++L AC
Sbjct: 566 QSSKRMFYQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFAC 625
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVE+ YF+ M+ + I P +HY CMVD+L RAG L EA L+ +
Sbjct: 626 SHGGLVEQAIHYFEKMQA-WGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANS 684
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W ALL A T+ N ++ + AA+ L EL D+ YV+LS++Y+ G+ +D R+R+ K
Sbjct: 685 WAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVLMKG 744
Query: 563 KRIRKSPGCSWIILKDKVHLFLA 585
++K GCSW+ ++ + H F +
Sbjct: 745 TTLKKDGGCSWVQVRGQYHAFFS 767
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 205/417 (49%), Gaps = 66/417 (15%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
++ ++K G A +F+ M E+ VV++ +MVD K+GRV EA E++++ P +V +
Sbjct: 158 MVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 217
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG--LV 194
TA + G+++ + + +F M G+ N IT + +AC + + + G +
Sbjct: 218 TATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIK 277
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
S F F+ I + NS+IT+Y R+G A KVF M +D VSW +L+ Y +G+++ A
Sbjct: 278 SNF-FESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGAR 336
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
R+ + MP ++ VSW T+I +GN ++++L++
Sbjct: 337 RVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYS------------------------- 371
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
+ML RPN SSVLSA A L G++IHA +KM ++V + +SL+
Sbjct: 372 ------QMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLID 425
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE-------- 426
+Y KC DA IF + E+NIV +NS+ SG++ NG EA+ LF+KM
Sbjct: 426 MYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTI 485
Query: 427 -----------------------GLVPNQITFLSVLSAC-NHVGLVEEGFIYFKSMK 459
G VP +ITF SVL AC N LV + K++K
Sbjct: 486 ISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIK 542
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 141/313 (45%), Gaps = 36/313 (11%)
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS---WNS 239
R + +H R G D + + ++T Y E ++ F A S ++
Sbjct: 98 RLPLALSLHAHAVRSGVAADTSVASHLLTTYAAFARAAECDRAFGDCVAAGAASPFTYDF 157
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
++ +V G+I A LF+ MP + VS+TTM+ +G + +++EL+ P +
Sbjct: 158 MVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 217
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TA ISGFV NE + A F +M+ VRPN +T ++ A I +K
Sbjct: 218 TATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIK 277
Query: 360 MN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNID------------------------- 393
N ES + +QNSL++LY + G+ A ++F +D
Sbjct: 278 SNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARR 337
Query: 394 ------ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
ERN VS+ ++I+ Q G EA+ L+ +M +G PN F SVLSAC +
Sbjct: 338 VLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLED 397
Query: 448 VEEGF-IYFKSMK 459
+ G I+ +S+K
Sbjct: 398 LRGGARIHARSLK 410
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 298/535 (55%), Gaps = 30/535 (5%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+N+LI Y ++G + R F+ + KD V+W ++ G K G + +AR + + P ++V
Sbjct: 84 ANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDV 143
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++WT+++ Y + D ++ D F +M G+A + +T+ + AC + G +H L
Sbjct: 144 ISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLL 203
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V G L ++I MY + G A +VF DAV
Sbjct: 204 VKEKGMSMSENLVVALIDMYAKCGDFGHAREVF------DAVGR---------------- 241
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
G+ SW +I G+ G+++ + LF+ M +D +T+ ++I+G++++ Q
Sbjct: 242 --------GRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLR 293
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EA F+ M R D+R + T+ S+LSA A+ L QG +HA + +E+D+ I +L+
Sbjct: 294 EALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALL 353
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y KCG V +A +F + +R++ ++ +MI+G A NG+G+ L F +M+ +G PN +
Sbjct: 354 DMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPV 413
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
++++VL+AC+H L+ EG +YF M+ LYNI P EHY CM+D+LGR+G L EA+DL+ +
Sbjct: 414 SYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKT 473
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
M +P +W ++L A R H +DLA+ AA+HL+++EPD YV L ++ K D
Sbjct: 474 MPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDA 533
Query: 554 NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+++RM + ++++K+ G S + + +VH F+ KS + EI L+ IS K
Sbjct: 534 SKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLK 588
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 143/583 (24%), Positives = 273/583 (46%), Gaps = 46/583 (7%)
Query: 32 TMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-WRDSVCSNALISGYLKVGRCEE- 89
TM +R+ S MITGF+R G+ A +Y M A R++ + + I G +
Sbjct: 694 TMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQL 753
Query: 90 AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
R+ + + ++V+ Y A +F ++P +N ++ G +
Sbjct: 754 HGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGNLKLT 813
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE-GVQVHGLVSRFG-FDYDIILGN 207
E+ FL MRR + N ++ + C + + E G Q+HG+V + G +I L N
Sbjct: 814 EELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSN 873
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA-YRLFE-----RMP 261
S++ +Y +G + K + + D +SWNS++S Y G ++EA Y L + +MP
Sbjct: 874 SLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMP 933
Query: 262 G-KDFVS----------W-----------------------TTMITGFSSKGNLEKSIEL 287
+ FVS W TT+I + + S+ +
Sbjct: 934 SVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAI 993
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA--ATA 345
FN +P ++I+ + ++ A M+ + V P+ +T S+ + A + A+
Sbjct: 994 FNEIPSIALECCNSLITSSLGCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASP 1053
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+L +H+ +VK+ E D+++ +SL++ Y+ G + ++ IF + + N++ + ++IS
Sbjct: 1054 SLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIIS 1113
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
A+ G G A+ LF +M GL P+ +TFL ++ C+ G+ EEG + + M+ ++
Sbjct: 1114 ACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELD 1173
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
P H+ACMV++L R G + EA++++ W +LL + + H L K AA
Sbjct: 1174 PDERHFACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANM 1233
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
L+++ + +S+ ++ IG + R++ +K ++KS
Sbjct: 1234 LIDVGRKDPATTLQVSNFFNDIGDRETALRIKEMTNVKEVKKS 1276
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 152/361 (42%), Gaps = 77/361 (21%)
Query: 135 AWTAMVDGYMKVDCFEDG---------FDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
A T + D ++ CF G F LF MRR + + T LF+ C R R
Sbjct: 3 ASTFLFDTALRA-CFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFK-CSSSSRPR 60
Query: 186 E--GVQVHGLVSRFGFDYDI-ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+H R + NS+I MY LG + + F + +DAVSW +IS
Sbjct: 61 ALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVIS 120
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
G G + +A L + P +D +SWT++I +S +++++ F
Sbjct: 121 GLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFK------------- 167
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
ML + + P+ +T+ VLSA + L G +H V + M
Sbjct: 168 ------------------NMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLLVKEKGM 209
Query: 363 ESDVSIQNSLVSLYSKCGN----------------------VVDAY----------RIFT 390
++ +L+ +Y+KCG+ ++D Y +F
Sbjct: 210 SMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFD 269
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
++ R+I+++NSMI+G+ +G EAL LF M+ L + T +S+LSAC +G + +
Sbjct: 270 QMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQ 329
Query: 451 G 451
G
Sbjct: 330 G 330
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/469 (18%), Positives = 181/469 (38%), Gaps = 66/469 (14%)
Query: 14 TALINNNCSI---YEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
+AL+N+ + + A +F +P++N ++ G G EEL R
Sbjct: 770 SALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGL---GNLKLTEELICCFLDMRRQ 826
Query: 71 SVCSNAL-----ISGYLKVGRCEEAARIFEAMVEK------DVVAWGSMVDGYCKKGRVI 119
+ N L + G + G E R +V K ++ S+VD Y G +
Sbjct: 827 YLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSV 886
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+ + + + ++V++W +++ Y ++ M G + + L G
Sbjct: 887 DTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSG 946
Query: 180 RFFRYREGVQVHGLVSRFGFDYDII-LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ ++ GVQ+HG+V + GF + + ++I MYG+ D + +F+ + N
Sbjct: 947 KTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCN 1006
Query: 239 SLISGYVHNGEIEEAYRLFERM------------------------PG------------ 262
SLI+ + + A + M P
Sbjct: 1007 SLITSSLGCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLV 1066
Query: 263 -----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
D +++IT ++ G L S +F + + + + +TAIIS A
Sbjct: 1067 KLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAME 1126
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN--SLVSL 375
F +M+ ++P+ +T ++ +G + +++ + E D ++ +V+L
Sbjct: 1127 LFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLV-IELMRASRELDPDERHFACMVNL 1185
Query: 376 YSKCGNVVDAYRIFTNIDERNIV-SYNSMIS---GFAQNGLGEEALNLF 420
S+ G V +A + R+ +++S++ +N LG+ A N+
Sbjct: 1186 LSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANML 1234
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 121/316 (38%), Gaps = 95/316 (30%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
R S+NA+I + + A +F M +R+ +++ +MITG++ G EA L++N
Sbjct: 243 RRPQSWNAIIDGYCKHG-HVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMN 301
Query: 64 MPARWRD------------SVCSN---------------------------ALISGYLKV 84
M R D S C++ AL+ Y+K
Sbjct: 302 M--RRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKC 359
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
GR EA +F+ M ++DV AW +M+ G +A+ M
Sbjct: 360 GRVNEATIVFQRMGKRDVHAWTAMIAG----------------------LAFNGMGKA-- 395
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
G + F MR G N ++ + AC EG R FD I
Sbjct: 396 -------GLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEG--------RLYFDEMRI 440
Query: 205 LGN---------SIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEIE--- 251
L N +I + GR G +DEA + V +M + ++V W S++S + I+
Sbjct: 441 LYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQ 500
Query: 252 -EAYRLFERMPGKDFV 266
A L + P +D V
Sbjct: 501 CAAEHLLKIEPDEDAV 516
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 303/550 (55%), Gaps = 41/550 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D++ ++D Y K RV A +FD+M E+NVV+WTA++ GY++ + L M
Sbjct: 38 DLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMG 97
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G+ N T + +ACG G+Q+HG+ + GF++ ++GN+ I MY + G +
Sbjct: 98 YSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIG 157
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITG-- 274
A +VF+ M R+ VSWN++I+G+ H G ++ LF+RM G+ D ++T+ +
Sbjct: 158 MAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACG 217
Query: 275 -----------------------------------FSSKGNLEKSIELFNMMPEKDDVTW 299
++ G L ++ ++F+ + +K+ ++W
Sbjct: 218 ALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISW 277
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+A+I GF EA F ++ + LS ++ A A + QG Q+H +++K
Sbjct: 278 SALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILK 337
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ D+S+ NS++ +Y KCG +A R+F+ + RN+VS+ MI+G+ ++GLGE+A++L
Sbjct: 338 VPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHL 397
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F +M+ +G+ +++ +L++LSAC+H GL+ E YF + + ++P EHYACMVDILG
Sbjct: 398 FNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILG 457
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L EA +LI +M +P G+W LL A R H NL++ + + L ++ D+ YV+
Sbjct: 458 RAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVM 517
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
+S++Y+ G ++ RVR K K ++K G SW+ + ++H F G + ++I
Sbjct: 518 MSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEM 577
Query: 600 LQTISKGTKE 609
L+ + + KE
Sbjct: 578 LKEMERRVKE 587
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 159/324 (49%), Gaps = 45/324 (13%)
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L L C + + +G+QVH GF +D+I+ N +I MYG+ +D A VF M
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG---------------------- 262
+R+ VSW +L+ GY+ G + + L M P
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 263 ------KDFVSWTTMITG-----FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
K W +++ +S G + + ++FN MP ++ V+W A+I+G +
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS--IQ 369
++ F M + P++ T +S L A A + G+QIHA ++ + I
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIA 246
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+++V LY+KCG + +A ++F I+++N++S++++I GFAQ G EA++LFR++++ V
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRES--V 304
Query: 430 PNQITF-LSVLSAC-NHVGLVEEG 451
N F LS++ + LVE+G
Sbjct: 305 SNVDGFVLSIMMGVFADLALVEQG 328
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 175/360 (48%), Gaps = 22/360 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR--DSVCSNALISGYLK 83
A ++F MP RN VS+ AMI G G ++ L+ M + D + +
Sbjct: 159 AEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGA 218
Query: 84 VGRCEEAARIFEAMVE-------KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+G +I +++ ++++A ++VD Y K G + EA+++FD++ +KN+++W
Sbjct: 219 LGAIRGGTQIHASLITRGFPISIRNIIA-SAIVDLYAKCGYLFEAQKVFDRIEQKNLISW 277
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+A++ G+ + + DLF +R + L+I+ +G Q+H + +
Sbjct: 278 SALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILK 337
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
DI + NSII MY + G +EA ++FS M R+ VSW +I+GY +G E+A L
Sbjct: 338 VPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHL 397
Query: 257 FERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFV 307
F RM D V++ +++ S G + +S E F+ + + + ++
Sbjct: 398 FNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILG 457
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
Q +EA + IE ++ ++PN+ ++LSA L G ++ + +M+ ++ V+
Sbjct: 458 RAGQLKEA-KNLIENMK--LKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVN 514
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 5/226 (2%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L+ +L + +QG Q+HA V M D+ + N L+ +Y KC V A +F +
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
ERN+VS+ +++ G+ Q G + +L L +M G+ PN+ TF + L AC +G+VE G +
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENG-M 125
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
M E +D+ + G + A + N M F W A++ AG TH
Sbjct: 126 QIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVS-WNAMI-AGHTH 183
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV--IGKKRDGNRVR 557
L M+ + + + S L + +G R G ++
Sbjct: 184 EGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIH 229
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 19/272 (6%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCS------NA 76
++EA ++F + +N +S++A+I GF + G EA +L+ + R+SV + +
Sbjct: 259 LFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQL----RESVSNVDGFVLSI 314
Query: 77 LISGYLKVGRCEEAAR----IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
++ + + E+ + I + D+ S++D Y K G EA +F +M +N
Sbjct: 315 MMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRN 374
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VV+WT M+ GY K E LF M+ G+ + + L AC RE +
Sbjct: 375 VVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFS 434
Query: 193 -LVSRFGFDYDIILGNSIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEI 250
L + +I ++ + GR G + EA N + +M K + W +L+S +G +
Sbjct: 435 RLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNL 494
Query: 251 E---EAYRLFERMPGKDFVSWTTMITGFSSKG 279
E E + RM + V++ M ++ G
Sbjct: 495 EIGREVGEILFRMDTDNPVNYVMMSNIYAEAG 526
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 163/408 (39%), Positives = 252/408 (61%), Gaps = 1/408 (0%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D++ N+ + R G +D A +F M ++D VSWN+++ GY GE E+A+ LF+RMP
Sbjct: 266 DVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMP 325
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G++ VSW+T+++ + KG++E + +F+ MP K+ VTWT ++S EEA R F E
Sbjct: 326 GRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTE 385
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M+ + + + + S+L+A A + +L G +IH HV + + + N+L+ ++ KCG
Sbjct: 386 MMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGC 445
Query: 382 VVDAYRIF-TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
V A IF T I E+++VS+N +I GFA +G GE+AL LF +MK +G P+ +T ++VLS
Sbjct: 446 VNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLS 505
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC H+GLVEEG +F +M+T Y I+P EHY CMVD+LGR G + EA+D+I M +EP
Sbjct: 506 ACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNE 565
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
+WG+LL A R H N++ A+LA L L+P SA Y VLS++Y+ GK D + R++
Sbjct: 566 VIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQM 625
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K +K+ G SWI L + H F G + + +I + +S K
Sbjct: 626 KGTGSQKTAGSSWIELNEAFHEFTVGDRKHPESDQISDMIDRLSSHVK 673
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 148/287 (51%), Gaps = 8/287 (2%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA+I A N + +A ++F M R+ VS+ + VR+G A ++ MP +
Sbjct: 240 NALIDAYSKNQ-GLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEK-- 296
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+V N ++ GY K G E+A +F+ M ++VV+W ++V YCKKG + AR IFDKMP
Sbjct: 297 DTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMP 356
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
KN+V WT MV + E+ LF M + + I + + AC G +
Sbjct: 357 AKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKR 416
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNG 248
+H V + ++ N+++ M+ + G ++ A+ +F + + ++D VSWN +I G+ +G
Sbjct: 417 IHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHG 476
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
E+A LF +M + F V+ +++ + G +E+ F M
Sbjct: 477 PGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANM 523
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 207/499 (41%), Gaps = 103/499 (20%)
Query: 20 NCSIYEAFEIFATMPMRN--AVSYAAMITGFVRRGMF-YEAEELYVNMPARWRDSVCSNA 76
N + A +F +P+R +Y+ +I G+ +V D+ NA
Sbjct: 182 NSLPHAALAVFLDVPLRQRGTFTYSFLIKALAAAGLTPVRGAHAHVVKLGSAEDTFVGNA 241
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
LI Y K +A ++F+ M +DVV+W + + ++G V AR +FD+MPEK+ V+W
Sbjct: 242 LIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSW 301
Query: 137 TAMVDGYMKVDCFEDGFDLFLSM----------------RRGGM-----------AFNSI 169
M+DGY K E F+LF M ++G M A N +
Sbjct: 302 NTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLV 361
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T TI+ AC + E ++ + + D+I SI+ G + ++ +
Sbjct: 362 TWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHV 421
Query: 230 SK----RDAVSWNSLISGYVHNGEIEEAYRLFE-RMPGKDFVSWTTMITGFSSKGNLEKS 284
+ R + N+L+ + G + A +F+ + KD VSW +I GF+ G EK+
Sbjct: 422 RQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKA 481
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+ELF M ++ GF P+ +TL +VLSA
Sbjct: 482 LELFAQMKQQ----------GF---------------------HPDAVTLINVLSACTHM 510
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+ +G + A NME+D I+ I Y M+
Sbjct: 511 GLVEEGRRFFA-----NMETDYGIKP-------------------------QIEHYGCMV 540
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
+ GL +EA+++ ++M E PN++ + S+LSAC VE + ++ L N+
Sbjct: 541 DLLGRGGLIKEAVDMIKRMPWE---PNEVIWGSLLSACRLHKNVEYAEL---AVNELSNL 594
Query: 465 EPGPE-HYACMVDILGRAG 482
+P +YA + +I AG
Sbjct: 595 QPSSAGNYAVLSNIYAEAG 613
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFAT-MPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
R++ NA++ C + A IF T + ++ VS+ +I GF G +A EL+
Sbjct: 428 RSTLVCNALMDMFCKCGC-VNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFA 486
Query: 63 NMPAR--WRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKK 115
M + D+V ++S +G EE R F M ++ + +G MVD +
Sbjct: 487 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRG 546
Query: 116 GRVIEAREIFDKMP-EKNVVAWTAMVDG 142
G + EA ++ +MP E N V W +++
Sbjct: 547 GLIKEAVDMIKRMPWEPNEVIWGSLLSA 574
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 204/668 (30%), Positives = 334/668 (50%), Gaps = 49/668 (7%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGM-------FYEAE 58
S S + ++ ++ S+ EA +F M + +S+ AMI+ + G+ F+
Sbjct: 981 SVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 1040
Query: 59 ELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
L+ + S+ S LK GR + + ++ +V +++ Y + GR
Sbjct: 1041 HLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGL-VVKLGLDSNVCICNTLLTLYSEAGRS 1099
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+A +F M E+++++W +M+ Y++ DG + + + G N +T AC
Sbjct: 1100 EDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAAC 1159
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
E VH L+ GF +I+GN+++TMYG+LG M EA KV M + D V+WN
Sbjct: 1160 SNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWN 1219
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDF-VSWTTMI------------------------- 272
+LI G+ N E EA + ++ + K ++ TM+
Sbjct: 1220 ALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVL 1279
Query: 273 TGFSSK--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
TGF S G+L S +F+ + K +TW A+++ ++ EEA +
Sbjct: 1280 TGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKI 1339
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F EM V +Q + S L+A+A A L +G Q+H V+K+ ESD+ + N+ + +Y K
Sbjct: 1340 FGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGK 1399
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG + D ++ R+ +S+N +IS FA++G ++A F +M G P+ +TF+S+
Sbjct: 1400 CGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSL 1459
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSACNH GLV+EG Y+ SM + + PG EH C++D+LGR+G L+ A I M P
Sbjct: 1460 LSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPP 1519
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
W +LL A R H NL+LA+ A+HL+EL+P + YV+ S++ + GK D +R
Sbjct: 1520 NDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRK 1579
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDW 617
+ I+K P CSW+ LKDKVH F G K I L + K TKE + P +
Sbjct: 1580 EMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSF 1639
Query: 618 SLLGLERD 625
+L ++ +
Sbjct: 1640 ALHDMDEE 1647
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/502 (33%), Positives = 274/502 (54%), Gaps = 40/502 (7%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G VI AR +FD MPE++VV+WTAMV GY + FE F LF MR G+ N T
Sbjct: 75 YVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTY 134
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
AC G+QV G + + F ++ + ++++ + + G M++A+ +F M +
Sbjct: 135 GSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMME 194
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM------P------------------------ 261
RD VSWN++I GY G ++++ +F M P
Sbjct: 195 RDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQI 254
Query: 262 ---------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
G + +I ++ G+L + +L M +KD + TA+I+G+ + Y
Sbjct: 255 HGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIY 314
Query: 313 E-EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
+A F EM + ++ + + L S+L+ A A+ G+QIHA +K DV++ N+
Sbjct: 315 SVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNA 374
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
L+ +Y+K G + DA R F ++E+N++S+ S+ISG+A++G G A++L++KM+ +G PN
Sbjct: 375 LIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPN 434
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
+TFLS+L AC+H GL EG F +M YNI+P EHY+CMVD+ R G L EA +L+
Sbjct: 435 DVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLL 494
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
+ + +WGA+LGA + + L K AA +L ++P+++ YVVL+ +YS G
Sbjct: 495 CKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWD 554
Query: 552 DGNRVRMKKKLKRIRKSPGCSW 573
D ++R + + +K+ G S+
Sbjct: 555 DAWKIRKLMEERSTKKNAGYSF 576
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 148/573 (25%), Positives = 261/573 (45%), Gaps = 62/573 (10%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+Y A ++F MP N VS+ +++ G+ G E +Y M S N +
Sbjct: 897 VYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV-SGNQNTFATVTS 955
Query: 83 KVGRCEEA-------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G E+ I + E V S++ + V EA +FD M E ++++
Sbjct: 956 SCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIIS 1015
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W AM+ Y + F MR NS TL+ L C + G +HGLV
Sbjct: 1016 WNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVV 1075
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ G D ++ + N+++T+Y G ++A VF M++RD +SWNS+++ YV +G+ + +
Sbjct: 1076 KLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLK 1135
Query: 256 LFERM--PGK------------------------------------DF-VSWTTMITGFS 276
+ + GK DF + ++T +
Sbjct: 1136 ILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYG 1195
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G + ++ ++ MP+ D VTW A+I G NE+ EA + + + K + N +T+ S
Sbjct: 1196 KLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS 1255
Query: 337 VLSA-SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
VL A SA L G IHAH+V ESD ++NSL+++Y+KCG++ + IF + +
Sbjct: 1256 VLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNK 1315
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ +++N+M++ A +G GEEAL +F +M++ G+ +Q +F L+A ++ ++EEG
Sbjct: 1316 SPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEG-QQL 1374
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP-----GVWGALLGAG 510
+ E +D+ G+ G + + + ++ P P W L+ A
Sbjct: 1375 HGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML------PQPINRSRLSWNILISAF 1428
Query: 511 RTHLNLDLAKLAAQHLMEL--EPDSATPYVVLS 541
H A+ +++L +PD T +LS
Sbjct: 1429 ARHGCFQKARETFHEMLKLGPKPDHVTFVSLLS 1461
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 256/541 (47%), Gaps = 53/541 (9%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI--- 78
+I A +F M RN S++ M++G+VR G++ EA L+ M W V N +
Sbjct: 794 NIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM---WGLGVEPNGFMVAS 850
Query: 79 -------SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
SGY+ + + + + DV ++V Y G V A+++F++MP+
Sbjct: 851 LITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH 910
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
NVV+WT+++ GY + +++ MR+ G++ N T + +CG G QV
Sbjct: 911 NVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVL 970
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
G + ++GF+ + + NS+I+M+ ++EA VF M++ D +SWN++IS Y H+G
Sbjct: 971 GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 1030
Query: 252 EAYRLFERM-------------------PGKDFVSW--------------------TTMI 272
E+ R F M D + W T++
Sbjct: 1031 ESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLL 1090
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
T +S G E + +F M E+D ++W ++++ +V + + + + E+L+ N +
Sbjct: 1091 TLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHV 1150
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T +S L+A + L + +HA ++ + + N+LV++Y K G +++A ++ +
Sbjct: 1151 TFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTM 1210
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+ + V++N++I G A+N EA+ ++ ++++G+ N IT +SVL AC+ + +
Sbjct: 1211 PQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHG 1270
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
+ + L E ++ + + G L + + + + + P W A++ A
Sbjct: 1271 MPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPI-TWNAMVAANAH 1329
Query: 513 H 513
H
Sbjct: 1330 H 1330
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 222/480 (46%), Gaps = 81/480 (16%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+N LI+ Y K G E A +F+ M ++ +W +M+ G
Sbjct: 782 TNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSG---------------------- 819
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF-FRYREGVQVHG 192
Y++V +E+ LF M G+ N + L AC R + EG QVHG
Sbjct: 820 ---------YVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V + G D+ +G +++ YG +G + A K+F M + VSW SL+ GY +G E
Sbjct: 871 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 930
Query: 253 AYRLFERMPG--------------------------------------KDFVS-WTTMIT 273
+++RM +D VS ++I+
Sbjct: 931 VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 990
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
FSS ++E++ +F+ M E D ++W A+IS + ++ E+ R F M N T
Sbjct: 991 MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 1050
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
LSS+LS ++ L G IH VVK+ ++S+V I N+L++LYS+ G DA +F +
Sbjct: 1051 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 1110
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
ER+++S+NSM++ + Q+G + L + ++ G V N +TF S L+AC++ E I
Sbjct: 1111 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSN----PECLI 1166
Query: 454 YFKSMKTLYNIEPGPEHYA----CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
K + L I G + +V + G+ G + EA ++ +M +P W AL+G
Sbjct: 1167 ESKIVHALI-IVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 1224
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 213/477 (44%), Gaps = 66/477 (13%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------------PARWRD 70
+ A +F MP R+ VS+ AM++G+ + G F +A L+ +M + R
Sbjct: 81 VIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRA 140
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
L G ++V C + R E + K ++VD + K G++ +A +F M E
Sbjct: 141 CTSLRCLDMG-IQVQGCIQKGRFVENLFVKS-----ALVDFHSKCGKMEDASYLFGTMME 194
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
++VV+W AM+ GY +D F +F SM RGG+ + TL + A Q+
Sbjct: 195 RDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQI 254
Query: 191 HGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
HG++++ G+ YDI+ G +I Y + G + A + M K+D S +LI+GY H G
Sbjct: 255 HGIITQLGYGSYDIVTG-LLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGI 313
Query: 250 IE-EAYRLFERM---------------------------------------PGKDFVSWT 269
+A LF+ M P D
Sbjct: 314 YSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGN 373
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+I ++ G +E + F+ M EK+ ++WT++ISG+ + A + +M K +P
Sbjct: 374 ALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKP 433
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVV-KMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
N +T S+L A + T +G + ++V K N++ + +V L+++ G + +AY +
Sbjct: 434 NDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNL 493
Query: 389 FTNIDERNIVSYNSMISG----FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
ID ++ S I G + LG+EA + M+ E V N + S+ SA
Sbjct: 494 LCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSV-NYVVLASIYSA 549
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 17/241 (7%)
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G D T +I + G++ + +F+ MPE+ V+WTA++SG+ N ++E+AF F +
Sbjct: 62 GSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSD 121
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M V+ NQ T S L A + L+ G Q+ + K ++ ++++LV +SKCG
Sbjct: 122 MRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGK 181
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ DA +F + ER++VS+N+MI G+A G +++ +FR M GLVP+ T SVL A
Sbjct: 182 MEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRA 241
Query: 442 CNHVGLVEEGFIYFKSMKTL--------YNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
G G I + + Y+I G +++ + GSL A DL
Sbjct: 242 SAEGG----GLIIANQIHGIITQLGYGSYDIVTG-----LLINAYAKNGSLRSAKDLRKG 292
Query: 494 M 494
M
Sbjct: 293 M 293
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 40/278 (14%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H + I N++I MY + G ++ A VF M R+ SW++++SGYV
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 247 NGEIEEAYRLFERMPG----------------------------------------KDFV 266
G EEA LF +M G D
Sbjct: 823 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 882
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
T ++ + S G + + +LF MP+ + V+WT+++ G+ ++ E + M ++
Sbjct: 883 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 942
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
V NQ T ++V S+ G Q+ H+++ E VS+ NSL+S++S +V +A
Sbjct: 943 VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEAC 1002
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
+F +++E +I+S+N+MIS +A +GL E+L F M+
Sbjct: 1003 YVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 1040
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 141/298 (47%), Gaps = 40/298 (13%)
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
++G +H + GF D+ L +I Y ++G + A VF M +R VSW +++SGY
Sbjct: 47 KQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGY 106
Query: 245 VHNGEIEEAYRLFERMP-----------GKDFVSWTTM---------------------- 271
NG E+A+ LF M G + T++
Sbjct: 107 SQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENL 166
Query: 272 -----ITGFSSK-GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ F SK G +E + LF M E+D V+W A+I G+ +++F F MLR
Sbjct: 167 FVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRG 226
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ P+ TL SVL ASA L +QIH + ++ S + L++ Y+K G++ A
Sbjct: 227 GLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSA 286
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGL-GEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ + ++++ S ++I+G+A G+ +AL+LF++M + + + S+L+ C
Sbjct: 287 KDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNIC 344
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
QG IH H++ SD+ + L+ Y K G+V+ A +F + ER++VS+ +M+SG++
Sbjct: 48 QGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYS 107
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
QNG E+A LF M+ G+ NQ T+ S L AC + ++ G ++ +E
Sbjct: 108 QNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLF 167
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
A +VD + G + +A L +M E W A++G
Sbjct: 168 VKSA-LVDFHSKCGKMEDASYLFGTM-MERDVVSWNAMIGG 206
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 19/305 (6%)
Query: 7 ASYNAMITALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMF-YEAEELY- 61
SY+ + LIN N S+ A ++ M ++ S A+ITG+ G++ +A +L+
Sbjct: 264 GSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFK 323
Query: 62 -VNMPARWRDSV--CSNALISGYLKVGRCEEAARIFEAMVEK--DVVAWGSMVDGYCKKG 116
+N D V CS I L F + DV +++D Y K G
Sbjct: 324 EMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSG 383
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
+ +A+ FD+M EKNV++WT+++ GY K L+ M G N +T L
Sbjct: 384 EIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLF 443
Query: 177 ACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDA 234
AC EG + + +V+++ + ++ ++ R G ++EA + + K +A
Sbjct: 444 ACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNA 503
Query: 235 VSWNSL-----ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
W ++ I GY+ G+ E A LF P ++ V++ + + +S+ G + + ++
Sbjct: 504 SLWGAILGASSIYGYMSLGK-EAASNLFNMQP-ENSVNYVVLASIYSAAGLWDDAWKIRK 561
Query: 290 MMPEK 294
+M E+
Sbjct: 562 LMEER 566
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G +HA + ++ + N+L+++YSK GN+ A +F + RN S+++M+SG+ +
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG-LVEEGF 452
GL EEA+ LF +M G+ PN S+++AC+ G + +EGF
Sbjct: 823 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGF 866
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 187/531 (35%), Positives = 288/531 (54%), Gaps = 33/531 (6%)
Query: 76 ALISGY-LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
AL+SG +K G A+ + + V+ G+++ Y G V + R++FD+M + +V
Sbjct: 100 ALVSGQEVKEGEEVHASVVRTGFACSEFVS-GALLGFYVACGLVGKGRQVFDEMRQPGLV 158
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
WT ++ Y+ V E +LF +MR G+ + + ++ + ACG +H +
Sbjct: 159 LWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFI 218
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G + D + +++I+ YG G ++ AY
Sbjct: 219 EKSGIEVDAFVSSTLISTYGEC-------------------------------GSLDYAY 247
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
R F+ P K+ V W TMI NLE +LF MP++D V+W ++I GF QY+E
Sbjct: 248 RFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQE 307
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A WF EM V PN LTL S LSA A+ L+ G+ IHA+V K +M D S+ +SL+
Sbjct: 308 ALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLID 367
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSKCG++ A +IF R++ ++ S++ G A +G GE+AL+ F KMK+ + P+ +T
Sbjct: 368 MYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVT 427
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ VLSAC H GL+++G+ YF+SM+ ++ + P EHY CMVD+LGR G L EA DLI M
Sbjct: 428 MVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGM 487
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
E +WGA L A R H N++L ++AA+ L+ L+P V+LS++Y+ K
Sbjct: 488 PMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWARVMLSNMYAEEAKWDRSM 547
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
+R + K K ++KSPGCS I + VH FL G S EI ++ I K
Sbjct: 548 GLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEK 598
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 10/277 (3%)
Query: 25 EAFEIFATM------PMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI 78
+A E+F TM P A+S G + +A ++ D+ S+ LI
Sbjct: 175 KALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLI 234
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
S Y + G + A R F+ K++V W +M+ + + +++F MP+++VV+W +
Sbjct: 235 STYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNS 294
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ G+ ++ +++ F M G++ N++TL AC G +H V +
Sbjct: 295 MIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKND 354
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ D L +S+I MY + G +D+A ++F ++RD +W S++ G +G E+A F
Sbjct: 355 MNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFS 414
Query: 259 RMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
+M D V+ +++ + G L++ F M
Sbjct: 415 KMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSM 451
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 22/244 (9%)
Query: 298 TWTAIISGFVNNE--QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
W +I V N + ++++ LR +RPN T +L A + + +G ++HA
Sbjct: 56 VWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHA 115
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
VV+ + +L+ Y CG V ++F + + +V + +I + E+
Sbjct: 116 SVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEK 175
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY---NIEPGPEHYA 472
AL LFR M++ GL P+ + +V+SAC +G + K+M IE +
Sbjct: 176 ALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVA----KAMHCFIEKSGIEVDAFVSS 231
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPG----VWGALLGAGRTHLNLDLAKLAAQHLME 528
++ G GSL A F+ P VW ++ H NL+L K L +
Sbjct: 232 TLISTYGECGSLDYAYRF-----FQETPMKNIVVWNTMIHQSVEHNNLELGK----QLFQ 282
Query: 529 LEPD 532
PD
Sbjct: 283 SMPD 286
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 44/268 (16%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ A+ F PM+N V + MI V ++L+ +MP RD V N++I G+
Sbjct: 242 SLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPD--RDVVSWNSMIGGF 299
Query: 82 LKVGRCEEAARIFEAMV----------------------EKDVVAW-------------- 105
++G+ +EA F M D AW
Sbjct: 300 ARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDG 359
Query: 106 ---GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
S++D Y K G + +A +IF++ +++ WT++V G E F M+
Sbjct: 360 SLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEA 419
Query: 163 GMAFNSITLTILFEACGRFFRYREG-VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+ + +T+ + AC +G + FG + ++ + GR+G + E
Sbjct: 420 QVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKE 479
Query: 222 A-NKVFSMMSKRDAVSWNSLISGY-VHN 247
A + + M + + + W + +S VHN
Sbjct: 480 AYDLIMGMPMEANEIIWGAFLSACRVHN 507
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 295/548 (53%), Gaps = 33/548 (6%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKG-RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
A++ + D A ++D K V A +F ++ + N MV Y +
Sbjct: 32 AQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKCYTESSTP 91
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
E + MR+ G+ ++ T + +ACG EG V G + GF D+ + N +
Sbjct: 92 ERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGL 151
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
I+MY R G A VF S++D VSWNS++ GYV GE+E A +F+ MP +D VSW+
Sbjct: 152 ISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWS 211
Query: 270 TMITGFSSK--------------------------------GNLEKSIELFNMMPEKDDV 297
MI G+ K G +E + E+FB M +K+ +
Sbjct: 212 IMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKMLQKNVI 271
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W+ +I G+ + +EA F +ML + ++P+++++ +SA + L+QG IH ++
Sbjct: 272 SWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYM 331
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+ M D+ +Q +LV +Y KCG+ +A IF ++ ERN+VS+N MI G NG G+EAL
Sbjct: 332 KRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGFGKEAL 391
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
F +M+ E + + + FL VL AC+H LV EG F MK +Y +EP EHY C+VD+
Sbjct: 392 ECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDL 451
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGRAG L + ++I SM +P +WG+LL A R H N+ LA++ + L EL+ D + Y
Sbjct: 452 LGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVY 511
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
V++S++Y+ +G R+R K ++++K G S I + V F++G KS + +EIE
Sbjct: 512 VLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHILREEIE 571
Query: 598 VTLQTISK 605
+ + +++K
Sbjct: 572 LVIWSLAK 579
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 152/290 (52%), Gaps = 14/290 (4%)
Query: 12 MITALINNNCSIYE---AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
++ LI+ C E A +F ++ VS+ +M+ G+V G A+ ++ MP R
Sbjct: 147 VVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPER- 205
Query: 69 RDSVCSNALISGY-LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
D V + +I GY K+G A F++M +D+V+W SM+DGY K G + AREIFBK
Sbjct: 206 -DVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBK 264
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
M +KNV++W+ M+DGY ++ +LF M G+ + +++ AC + +G
Sbjct: 265 MLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQG 324
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+H + R DI++ +++ MY + G DEA +F+ M +R+ VSWN +I G N
Sbjct: 325 RWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMN 384
Query: 248 GEIEEAYRLF-----ERMPGKDFVSWTTMITGFSSKGNL-EKSIELFNMM 291
G +EA F ER+P D + ++ S NL + + +FN M
Sbjct: 385 GFGKEALECFXQMEMERIPMDDLLFLGVLMA--CSHANLVTEGLHIFNQM 432
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 197/653 (30%), Positives = 338/653 (51%), Gaps = 57/653 (8%)
Query: 3 DRTSASYNAMITALINNNCSIYE-AFEIFATM-PMRNAVSYAAMITGFVRRGMFYEAEEL 60
DR++ NA+I + C I + A +F M R+ S+ +MI+G ++ GMF +A +L
Sbjct: 196 DRSTFVANALIA--MYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDL 253
Query: 61 YVNMPARWRDSVCSNALIS-GYLKVGRCEEAARI-FEAMVEKDVVAWGSMVDGYC----- 113
+ M R + N+ + G L+V C E A++ + ++ GS V+ C
Sbjct: 254 FRGMQ---RAVLSMNSYTTVGVLQV--CTELAQLNLGRELHAALLKSGSEVNIQCNALLV 308
Query: 114 ---KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
K GRV A +F ++ EK+ ++W +M+ Y++ + + + M RGG +
Sbjct: 309 MYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHAC 368
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ L A G G +VH + D D +GN+++ MY + +++ + VF M
Sbjct: 369 IVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMR 428
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFER-----------MPGK---------------- 263
+D +SW ++I+ Y + EA +F M G
Sbjct: 429 IKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQ 488
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D V +I + G + S+++F + +KD VTWT++I+ + N+
Sbjct: 489 LHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLL 548
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA F EM DV+P+ + L S+L A ++L +G ++H +++ N + +I +SL
Sbjct: 549 NEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSL 608
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V +YS CG++ A ++F + +++V + +MI+ +G G++A++LF++M G+ P+
Sbjct: 609 VDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDH 668
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
++FL++L AC+H LV EG Y M + Y +EP EHYAC+VD+LGR+G EA + I
Sbjct: 669 VSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIK 728
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
SM +P VW +LLGA R H N +LA +AA L+ELEPD+ YV++S++++ +GK +
Sbjct: 729 SMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNN 788
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
VR + + +RK P CSWI + + VH F S D + I + L I++
Sbjct: 789 AKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITE 841
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 228/484 (47%), Gaps = 57/484 (11%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR---RGGMAFNS 168
Y K GRV +AR +FD M + V +W A++ Y+ + ++ +MR G+A +
Sbjct: 105 YGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDG 164
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
TL + +A G R G +VHGL + G D + N++I MY + G +D A +VF +
Sbjct: 165 CTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFEL 224
Query: 229 MSK-RDAVSWNSLISGYVHNGEIEEAYRLFERMP-------------------------- 261
M RD SWNS+ISG + NG +A LF M
Sbjct: 225 MHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNL 284
Query: 262 GKDF------------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
G++ + ++ ++ G ++ ++ +F + EKD ++W +++S +V N
Sbjct: 285 GRELHAALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQN 344
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
Y EA + EMLR +P+ + S+ SA L G ++HA+ +K ++SD +
Sbjct: 345 GLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVG 404
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N+L+ +Y KC + + +F + ++ +S+ ++I+ +AQ+ EAL +FR+ + EG+
Sbjct: 405 NTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIK 464
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC---MVDILGRAGSLAE 486
+ + S+L AC+ GL E + K + Y I G ++DI G G +
Sbjct: 465 VDPMMIGSILEACS--GL--ETILLAKQLHC-YAIRNGLLDLVVKNRIIDIYGECGEVYH 519
Query: 487 AIDLINSMTFEPPPGVWGALLG--AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
++ + ++ + W +++ A LN L A +++PDS V L +
Sbjct: 520 SLKMFETVE-QKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDS----VALVSIL 574
Query: 545 SVIG 548
IG
Sbjct: 575 GAIG 578
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/566 (24%), Positives = 261/566 (46%), Gaps = 93/566 (16%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNA------------VSYAAMITGF 48
M+ RT S+NA+I A +++ S EA ++ M + A V A+ + G
Sbjct: 121 MSSRTVFSWNALIGAYLSSG-SACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGD 179
Query: 49 VRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVE-KDVVAWGS 107
R G E L V R + +NALI+ Y K G + A R+FE M + +DV +W S
Sbjct: 180 GRCGC--EVHGLAVKHGLD-RSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNS 236
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
M+ G + G ++A DLF M+R ++ N
Sbjct: 237 MISGCLQNGMFLQA-------------------------------LDLFRGMQRAVLSMN 265
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
S T + + C + G ++H + + G + +I N+++ MY + G +D A +VF
Sbjct: 266 SYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLVMYTKCGRVDSALRVFR 324
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK--------- 278
+ ++D +SWNS++S YV NG EA M F I SS
Sbjct: 325 EIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLN 384
Query: 279 -------------------GN-----------LEKSIELFNMMPEKDDVTWTAIISGFVN 308
GN +E S +F+ M KD ++WT II+ +
Sbjct: 385 GKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQ 444
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
+ ++ EA F E ++ ++ + + + S+L A + T+ Q+H + ++ N D+ +
Sbjct: 445 SSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIR-NGLLDLVV 503
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
+N ++ +Y +CG V + ++F +++++IV++ SMI+ +A +GL EAL LF +M+ +
Sbjct: 504 KNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDV 563
Query: 429 VPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
P+ + +S+L A + + +G ++ ++ +++E + +VD+ GSL+ A
Sbjct: 564 QPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAI--VSSLVDMYSGCGSLSGA 621
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTH 513
+ + N++ + +W A++ A H
Sbjct: 622 LKVFNAVKCKDMV-LWTAMINATGMH 646
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
+ G D T ++ + G + + LF+ M + +W A+I ++++ EA +
Sbjct: 90 LEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVY 149
Query: 320 IEM---LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
M V P+ TL+SVL AS G ++H VK ++ + N+L+++Y
Sbjct: 150 RAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMY 209
Query: 377 SKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
+KCG + A R+F + D R++ S+NSMISG QNG+ +AL+LFR M+ L N T
Sbjct: 210 AKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTT 269
Query: 436 LSVLSACNHVGLVEEG 451
+ VL C + + G
Sbjct: 270 VGVLQVCTELAQLNLG 285
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKM-NMESDVS-IQNSLVSLYSKCGNVVDAY 386
P Q VL AA + QG Q+HAH V ++E D + L+ +Y KCG V DA
Sbjct: 56 PPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADAR 115
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK---DEGLVPNQITFLSVLSA 441
+F + R + S+N++I + +G EAL ++R M+ G+ P+ T SVL A
Sbjct: 116 LLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKA 173
>gi|5803274|dbj|BAA83584.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|55296350|dbj|BAD68395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596022|gb|EAZ35802.1| hypothetical protein OsJ_20095 [Oryza sativa Japonica Group]
Length = 763
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 201/659 (30%), Positives = 322/659 (48%), Gaps = 111/659 (16%)
Query: 21 CSIYEAFE--------IFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--VNMP--ARW 68
C+ EA E +F + N A++IT + G+ E++ V P A W
Sbjct: 111 CARLEALEMGRCVHGLVFKSCSSGNVFVGASLITMYANCGVVSCLEQVLDGVESPNVALW 170
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
NALISG + R A + F+ M ++VV+W +M+ G+ V A ++F M
Sbjct: 171 ------NALISGLVMNHRVGYARKAFDRMPVRNVVSWTAMIKGHFTAHEVDMAFQLFKLM 224
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P KN V+W M+ G++ + F + +LF S+ G ++ L + A R G
Sbjct: 225 PVKNSVSWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILVKIVNAFAGMKSIRGGR 284
Query: 189 QVHGLVSRFGFDYDIILGNSIITMY--------GRLGF---------------------- 218
+HGL + GF YD++L S++ MY RL F
Sbjct: 285 CIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSD 344
Query: 219 -MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------- 260
+DEA K+F M+ RD +SWNS+I+GY+++G I +A L+ +M
Sbjct: 345 KIDEARKLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMTEKSLEAATALMSWFID 404
Query: 261 --------------PGKDFVSWTTMITGFSSKGNLEKSIELFNMM--------------- 291
P D +S TT++ G+ G+++ +++LF+MM
Sbjct: 405 NGMLDKARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDALDLFHMMQKRTVVTYNVMISGL 464
Query: 292 ----------------PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
P +D VTW+ +++G N EA +++ +ML ++RP++ +S
Sbjct: 465 FHQGKITEAYKLFNESPTRDSVTWSCLVAGLATNGLIHEALQFYKKMLLSNIRPSESVVS 524
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S++S + + + G Q HA +K+ ++S + IQNSL+SLY KCG ++ A IF + +R
Sbjct: 525 SLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQNSLISLYCKCGEMIIAQSIFDLMAKR 584
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+ V++N++I G+A N LG+ A+ +F M + P+ ITFL VLSACNH+ L+EE +F
Sbjct: 585 DKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDPDDITFLGVLSACNHMSLLEEAKYFF 644
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
+M Y I P HYACMVD+ R + EA L+ SM FEP +W +LL R N
Sbjct: 645 NAMTCTYGILPNIMHYACMVDLFCRKCMIKEAEGLVKSMPFEPDSAIWTSLLSGCRLTGN 704
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
LA+ AA L+ ++P + PY+ L ++ + K + +R + K K G SWI
Sbjct: 705 DKLAEHAASQLIAIDPCTKMPYLHLISVHGLTNKSTVIDSLRSQIKSTATEKDVGYSWI 763
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 199/416 (47%), Gaps = 44/416 (10%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
+ + GR+ ARE+FD MP ++VV+W ++ + FL MRR G + +
Sbjct: 45 HLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGFRPDHTSF 104
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ AC R G VHGLV + ++ +G S+ITMY G + +V +
Sbjct: 105 STALSACARLEALEMGRCVHGLVFKSCSSGNVFVGASLITMYANCGVVSCLEQVLDGVES 164
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
+ WN+LISG V N + A + F+RMP ++ VSWT MI G + ++ + +LF +M
Sbjct: 165 PNVALWNALISGLVMNHRVGYARKAFDRMPVRNVVSWTAMIKGHFTAHEVDMAFQLFKLM 224
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
P K+ V+W +I GFV +E++ EA F ++ + L +++A A ++ G
Sbjct: 225 PVKNSVSWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILVKIVNAFAGMKSIRGGR 284
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSK--------------------------CG----- 380
IH VK D+ ++ SLV +Y K CG
Sbjct: 285 CIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSD 344
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+ +A ++F +++ R+ +S+NSMI+G+ +G +A L+ KM ++ L +++S
Sbjct: 345 KIDEARKLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMTEKSLEAAT----ALMS 400
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG--RAGSLAEAIDLINSM 494
G+++ K+ YN+ P + +C + G + G + +A+DL + M
Sbjct: 401 WFIDNGMLD------KARDMFYNM-PQIDVMSCTTLLFGYVKGGHMDDALDLFHMM 449
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 186/568 (32%), Positives = 296/568 (52%), Gaps = 47/568 (8%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV S++ YC+ G V+ AR +FD+MP +++ +W AM+ GY C L++
Sbjct: 184 DVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGY----CQSGNAKEALTLS 239
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G A +S+T+ L AC + GV +H + G + ++ + N +I +Y G +
Sbjct: 240 DGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLK 299
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG------------ 262
+ KVF M RD +SWNS+I Y N + A LF+ M P
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILS 359
Query: 263 ----------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+D ++ ++ G ++ + +FN +P KD ++W
Sbjct: 360 QLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWN 419
Query: 301 AIISGFVNNEQYEEAFRWF--IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
IISG+ N EA + +E ++ NQ T SVL A + L QG ++H ++
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLL 479
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K + DV + SL +Y KCG + DA +F I N V +N++I+ +G GE+A+
Sbjct: 480 KNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVM 539
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF++M DEG+ P+ ITF+++LSAC+H GLV+EG F+ M+T Y I P +HY CMVD+
Sbjct: 540 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLY 599
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L A++ I SM +P +WGALL A R H N+DL K+A++HL E+EP+ +V
Sbjct: 600 GRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 659
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
+LS++Y+ GK + +R K +RK+PG S + + +KV +F G ++ +E+
Sbjct: 660 LLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYR 719
Query: 599 TLQTISKGTKEFDW-PKHDWSLLGLERD 625
L + + K + P H + L +E D
Sbjct: 720 ELTALHEKLKMVGYVPDHRFVLQDVEDD 747
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 243/508 (47%), Gaps = 61/508 (12%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L+ +C A R+ + ++V +V+ YC G V AR FD + ++V AW M+
Sbjct: 67 LQSAKCLHA-RLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMIS 125
Query: 142 GYMKVDCFEDGFDLF-LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY + + F L M G+ + T + +AC +G ++H L +FGF
Sbjct: 126 GYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNV---TDGNKIHCLALKFGFM 182
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+D+ + S+I +Y R G + A +F M RD SWN++ISGY +G +EA L + +
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGL 242
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSI----------------------------------- 285
D V+ ++++ + G+ + +
Sbjct: 243 RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQ 302
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
++F+ M +D ++W +II + NEQ A F EM ++P+ LTL S+ S +
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 346 TLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+ + ++ D++I N++V +Y+K G V A +F + ++++S+N++I
Sbjct: 363 EIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTII 422
Query: 405 SGFAQNGLGEEALNLFRKMKDEG--LVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT- 460
SG+AQNG EA+ ++ M++EG + NQ T++SVL AC+ G + +G ++ + +K
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 482
Query: 461 LY-NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV----WGALLGAGRTHLN 515
LY ++ G + D+ G+ G L +A+ L F P V W L+ H +
Sbjct: 483 LYLDVFVGTS----LADMYGKCGRLDDALSL-----FYQIPRVNSVPWNTLIACHGFHGH 533
Query: 516 LDLAKLAAQHLME--LEPDSATPYVVLS 541
+ A + + +++ ++PD T +LS
Sbjct: 534 GEKAVMLFKEMLDEGVKPDHITFVTLLS 561
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/531 (24%), Positives = 227/531 (42%), Gaps = 87/531 (16%)
Query: 14 TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
+LI+ C ++ A +F MP R+ S+ AMI+G+ + G EA L ++ R D
Sbjct: 189 ASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEA--LTLSDGLRAMD 246
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFD 126
SV +L+S + G I + E ++ ++D Y + G + + +++FD
Sbjct: 247 SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFD 306
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+M +++++W +++ Y + LF MR + + +TL L + R
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRA 366
Query: 187 GVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
V G R G F DI +GN+++ MY +LG +D A VF+ + +D +SWN++ISGY
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYA 426
Query: 246 HNG---EIEEAYRLFERMPGK--------------------------------------D 264
NG E E Y + E G+ D
Sbjct: 427 QNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 486
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
T++ + G L+ ++ LF +P + V W +I+ + E+A F EML
Sbjct: 487 VFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 546
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ V+P+ +T ++LSA + + +++G M++D I SL
Sbjct: 547 EGVKPDHITFVTLLSACSHSGLVDEGEWCFEM-----MQTDYGITPSL------------ 589
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
Y M+ + + G E ALN + M L P+ + ++LSAC
Sbjct: 590 -------------KHYGCMVDLYGRAGQLEIALNFIKSMP---LQPDASIWGALLSACRV 633
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
G V+ G I + + L+ +EP Y ++ + + E +D I S+T
Sbjct: 634 HGNVDLGKI---ASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIT 681
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 271/466 (58%), Gaps = 1/466 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A F + NV+ + A++ G + E ++ M R + S + + L +AC
Sbjct: 29 AASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVMPTSYSFSSLIKACTL 88
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G VHG V + GFD + + ++I Y G + + +VF M +RD +W ++
Sbjct: 89 LVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTM 148
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
IS +V +G++ A RLF+ MP K+ +W MI G+ GN E + LFN MP +D ++WT
Sbjct: 149 ISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWT 208
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+++ + N++Y+E F +++ K + P+++T+++V+SA A L G ++H ++V
Sbjct: 209 TMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQ 268
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ DV I +SL+ +Y+KCG++ A +F + +N+ +N +I G A +G EEAL +F
Sbjct: 269 GFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRMF 328
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M+ + + PN +TF+S+L+AC H G +EEG +F SM Y I P EHY CMVD+L +
Sbjct: 329 GEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSK 388
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L +A+++I +MT EP +WGALL + H NL++A +A Q+LM LEP ++ Y +L
Sbjct: 389 AGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLL 448
Query: 541 SDLYSVIGKKRDGNRVRMK-KKLKRIRKSPGCSWIILKDKVHLFLA 585
++Y+ + + ++R K L ++ PG SW+ + VHLF A
Sbjct: 449 VNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKTVHLFAA 494
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 181/383 (47%), Gaps = 50/383 (13%)
Query: 57 AEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
+ ++ +MP R D +IS +++ G A R+F+ M EK+V W +M+DGY K G
Sbjct: 130 SRRVFDDMPER--DVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLG 187
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
A +F++MP +++++WT M++ Y + +++ LF + GM + +T+T +
Sbjct: 188 NAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVIS 247
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
AC G +VH + GFD D+ +G+S+I MY + G +D A VF + ++
Sbjct: 248 ACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFC 307
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMP 292
WN +I G +G +EEA R+F M K + V++ +++T + G +E+ F M
Sbjct: 308 WNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMV 367
Query: 293 EKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATAT 346
+ + + ++ E+A +EM+R V PN ++L+
Sbjct: 368 QDYCIAPQVEHYGCMVDLLSKAGLLEDA----LEMIRNMTVEPNSFIWGALLN------- 416
Query: 347 LNQGSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
G ++H N+E + +++QN +V ++ N Y+ +++
Sbjct: 417 ---GCKLHK-----NLEIAHIAVQNLMV------------------LEPSNSGHYSLLVN 450
Query: 406 GFAQNGLGEEALNLFRKMKDEGL 428
+A+ E + MKD G+
Sbjct: 451 MYAEENRWNEVAKIRTTMKDLGV 473
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 62/242 (25%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
I+ S+ + + F + + + + A+I G V+ E+A ++ MLR +V P
Sbjct: 17 ISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVMPTS 76
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ SS++ A G +H HV K +S V +Q +L+ YS G+V + R+F +
Sbjct: 77 YSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDD 136
Query: 392 IDER-------------------------------NIVSYNSMISGFAQNGLGEEALNLF 420
+ ER N+ ++N+MI G+ + G E A LF
Sbjct: 137 MPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLF 196
Query: 421 RKMK-------------------------------DEGLVPNQITFLSVLSACNHVGLVE 449
+M D+G++P+++T +V+SAC H+G +
Sbjct: 197 NQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALA 256
Query: 450 EG 451
G
Sbjct: 257 LG 258
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
++K N D + N +S S + A F N+ N++ +N++I G E+A
Sbjct: 1 MIKTNTTQDCFLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQA 60
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
L + M ++P +F S++ AC LV+ F
Sbjct: 61 LVHYMHMLRNNVMPTSYSFSSLIKACTL--LVDSAF 94
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 319/620 (51%), Gaps = 47/620 (7%)
Query: 13 ITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRD 70
+ L +N I++A +F +P+R+ + + M+ G+V+ G F A + M +
Sbjct: 218 LIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPN 277
Query: 71 SVCSNALIS-----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
SV L+S G ++ G + + + E D +++ Y K G + +AR+IF
Sbjct: 278 SVSFVCLLSVCATRGIVRAG-IQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIF 336
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
D MP+ + V W ++ GY++ ++ LF +M G+ +SIT + + +
Sbjct: 337 DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+VH + R G +D+ L ++++ +Y + G ++ A K F + D ++ISGYV
Sbjct: 397 YCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYV 456
Query: 246 HNGEIEEAYRLFERMPGKDFVS-------------------------------------- 267
NG EA LF + + V
Sbjct: 457 LNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQ 516
Query: 268 -WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+++ ++ G L+ + + F MP KD V W +I F N + E A F +M
Sbjct: 517 VGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSG 576
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+ + ++LS+ LSA A L G ++H VV+ + SD + ++L+ +YSKCG + A
Sbjct: 577 TKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALAR 636
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+F +D +N VS+NS+I+ + +G E L+LF +M + G+ P+ +TFL ++SAC H G
Sbjct: 637 SVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAG 696
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
LV+EG YF+ M Y I EH+ACMVD+ GRAG L EA D I SM F P G WG+L
Sbjct: 697 LVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSL 756
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
LGA R H N++LAKLA++HL+EL+P+++ YV+LS++++ G+ +VR K K ++
Sbjct: 757 LGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQ 816
Query: 567 KSPGCSWIILKDKVHLFLAG 586
K PG SWI + H+F A
Sbjct: 817 KIPGYSWIDVNGGTHMFSAA 836
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 153/574 (26%), Positives = 262/574 (45%), Gaps = 77/574 (13%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALISGYL 82
+F + + ++ + +I GF G F A + M P ++ A G
Sbjct: 133 LFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKA-CGGLN 191
Query: 83 KVGRCEEAARIFEAM-VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
V C+ + +M D+ S++ Y G + +A+ +FD++P ++ + W M++
Sbjct: 192 NVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLN 251
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY+K F F MR + NS++ L C R G+Q+HGLV R GF+
Sbjct: 252 GYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFES 311
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D + N+IITMY + G + +A K+F +M + D V+WN LI+GYV NG +EA LF+ M
Sbjct: 312 DPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMV 371
Query: 262 GK-------DFVSW--------------------------------TTMITGFSSKGNLE 282
F S+ + ++ + G++E
Sbjct: 372 TSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVE 431
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+ + F D TA+ISG+V N EA F ++++ + PN LT++SVL A A
Sbjct: 432 MACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACA 491
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
A A+L G ++H ++K +E+ + +S+ +Y+K G + AY+ F + ++ V +N
Sbjct: 492 ALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNL 551
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----------HVGLVEEG 451
MI F+QNG E A++LFR+M G + ++ + LSAC H +V
Sbjct: 552 MIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNS 611
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA-- 509
FI + + ++D+ + G LA A + + M ++ W +++ A
Sbjct: 612 FISDTFVAST------------LIDMYSKCGKLALARSVFDMMDWKNEVS-WNSIIAAYG 658
Query: 510 --GRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
GR LDL + ++PD T V++S
Sbjct: 659 NHGRPRECLDLFHEMVE--AGIQPDHVTFLVIMS 690
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 7/233 (3%)
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G + + F GNL ++L +P W +I GF ++ A +F
Sbjct: 114 GSRMLGMYVLCRSFKDVGNLFCRLQLCYSLP------WNWLIRGFSMLGCFDFALMFFFR 167
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
ML +V P++ T V+ A + +H M D+ I +SL+ LY+ G
Sbjct: 168 MLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGY 227
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ DA +F + R+ + +N M++G+ +NG AL F++M++ + PN ++F+ +LS
Sbjct: 228 IHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSV 287
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
C G+V G I + E P ++ + + G+L +A + + M
Sbjct: 288 CATRGIVRAG-IQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIM 339
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
S A+ Q QIHA V+ M +++ + ++ +Y C + D +F + + +
Sbjct: 86 SDASLVKQQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPW 145
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
N +I GF+ G + AL F +M + P++ TF V+ AC
Sbjct: 146 NWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKAC 187
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/566 (32%), Positives = 306/566 (54%), Gaps = 41/566 (7%)
Query: 41 YAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGRCEEAARIFEAMV 98
++++I+ V + L+ + A + ++ +N LI Y K G E + F+ +
Sbjct: 81 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 140
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
K W +++ Y KKG +A ++FD+MP++N+V++ +++ G + + ++ F
Sbjct: 141 NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFRE 200
Query: 159 MRRG--GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
M+ G G+ + TL L C + QVHG+ + GF ++IL N++I YG+
Sbjct: 201 MQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKC 260
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFS 276
G E ++ LF M KD VSWT+M+ ++
Sbjct: 261 G-------------------------------EPNSSFCLFRSMVEKDAVSWTSMVVTYT 289
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
++ + ++FN MP K V+W A+ISGFV N + EA F +M+++ V P T S
Sbjct: 290 RASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVS 349
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESD---VSIQNSLVSLYSKCGNVVDAYRIF-TNI 392
VL A A+ A + +G Q+H +++ + V + N+L+ +Y+KCG++ A +F I
Sbjct: 350 VLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMI 409
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+++VS+N++I+GFAQNG GE++L +F +M + + PN +TFL VLSACNH GLV G
Sbjct: 410 HVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGL 469
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAG 510
SM+ Y ++P HYA ++D+LGR L EA+ LI + E + WGA+LG
Sbjct: 470 ELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGC 529
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H NL+LA+ AA+ L LEP++ YV+LS++Y+ G+ D NR+R K + ++K P
Sbjct: 530 RVHGNLELARKAAEALFALEPENTGRYVMLSNIYAASGRWSDTNRIRNVMKERGLKKEPA 589
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEI 596
S I LK+ H F+A K + EI
Sbjct: 590 FSRIELKESRHEFVAKDKFHPQIGEI 615
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 165/342 (48%), Gaps = 50/342 (14%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+ ++T+ ++N +++ + +A+++F MP RN VSY ++I+G R EA +
Sbjct: 139 LPNKTTRTWNTLLS-FYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKF 197
Query: 61 YVNM-------------------------PARW--------------RDSVCSNALISGY 81
+ M +W + + +NALI Y
Sbjct: 198 FREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAY 257
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
K G + +F +MVEKD V+W SMV Y + R+ +A ++F++MP K V+W A++
Sbjct: 258 GKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALIS 317
Query: 142 GYMKVD-CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
G++K C+E ++F M + G+ + T + +AC G QVH + R
Sbjct: 318 GFVKNGRCYE-ALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSS 376
Query: 201 ---YDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDAVSWNSLISGYVHNGEIEEAYRL 256
+++ + N+++ MY + G M A +F MM +D VSWN+LI+G+ NG E++ +
Sbjct: 377 DNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAV 436
Query: 257 FERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEK 294
F+RM + V++ +++ + G + +EL + M +
Sbjct: 437 FDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERR 478
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M ++ + S+ +M+ + I +A ++F MP++ VS+AA+I+GFV+ G YEA E+
Sbjct: 273 MVEKDAVSWTSMVVTYTRAS-RIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEV 331
Query: 61 YVNM------P------------------ARWRDSVCS----------------NALISG 80
+ M P R + C NAL+
Sbjct: 332 FHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDM 391
Query: 81 YLKVGRCEEAARIFEAMVE-KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV----VA 135
Y K G + A +FE M+ KDVV+W +++ G+ + GR ++ +FD+M E N+ V
Sbjct: 392 YAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVT 451
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGV 188
+ ++ G +L SM RR G+ S +L + GR R E +
Sbjct: 452 FLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAM 505
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 123/283 (43%), Gaps = 51/283 (18%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
+F +F +M ++AVS+ +M+ + R +A +++ MP ++ +V ALISG++K G
Sbjct: 266 SFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKY--TVSWAALISGFVKNG 323
Query: 86 RCEEAARIFEAMVEK------------------------------------------DVV 103
RC EA +F M+++ +V
Sbjct: 324 RCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVY 383
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
+ +++D Y K G + A +F+ M K+VV+W ++ G+ + ED +F M
Sbjct: 384 VFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIES 443
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+ N +T + AC G++ + + R+G +I + GR ++E
Sbjct: 444 NIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEE 503
Query: 222 A----NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
A KV + +S A+ W +++ G +G +E A + E +
Sbjct: 504 AMCLIEKVPNEISNHIAM-WGAVLGGCRVHGNLELARKAAEAL 545
>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
Length = 829
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/600 (32%), Positives = 327/600 (54%), Gaps = 21/600 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
+A ++F +P R V++ A++ G+V+ GM EA L M P R S C +A
Sbjct: 221 DARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRVTVSTCLSASA 280
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G ++ G+ A I + E D + S+++ YCK G + A IFD+M EK+VV W
Sbjct: 281 NMGGIEEGKQSHAIAIVNGL-ELDNILGTSILNFYCKVGLIEYAEMIFDRMIEKDVVTWN 339
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ GY++ ED + MRRG + F+ +TL+ L A R + G +V R
Sbjct: 340 LLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSLMSAAARTHNLKLGKEVQCYCIRH 399
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
GF DI+L ++ + MY + G + +A KVF+ ++D + WN+L++ Y G EA RLF
Sbjct: 400 GFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAAYAEPGLSGEALRLF 459
Query: 258 ERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVNN 309
M + ++W ++I G + ++ ++F M + ++WT +++G V N
Sbjct: 460 YEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMFLQMQSSGISPNLISWTTMMNGLVQN 519
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVSI 368
EEA + +M +R N +++ LSA A A+L+ G IH ++++ + S VSI
Sbjct: 520 GCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGRSIHGYIIRNQHHSSSVSI 579
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEG 427
+ SLV +Y+KCG++ A R+F + + YN+MIS +A G +EA L+R + +D G
Sbjct: 580 ETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYALYGNVKEATALYRSLDEDVG 639
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ P+ IT +VLSAC+H G + + F M + + ++P EHY MVD+L AG +A
Sbjct: 640 IEPDNITITNVLSACHHAGDINQAIHIFTDMVSKHAMKPCLEHYGLMVDLLASAGETEKA 699
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ LI M ++P + +LL + +L + ++HL+E EP+++ YV +S++Y+V
Sbjct: 700 LRLIEEMPYKPDARMIQSLLASCNKQHKSELVEYLSRHLLESEPENSGNYVTISNVYAVE 759
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK---VHLFLAGRKSCLDLKEIEVTLQTIS 604
G + ++R K+K ++K PGCSWI +K + VH+F+A K+ EI L ++
Sbjct: 760 GSWDEVGKMREMMKVKGLKKKPGCSWIQIKGEEQGVHVFVANDKTHFRNNEIRRILALLT 819
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 214/422 (50%), Gaps = 40/422 (9%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K + A+ +F K+ +NV +W A++ ++ E F+ M G+ ++ +
Sbjct: 112 YAKCDALEVAQLLFSKLRARNVFSWAAIIGVRCRIGLVEGALMGFVEMLENGLFPDNFVV 171
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ +ACG R G VHG V++ G + + +S+ MYG+ G +D+A KVF +
Sbjct: 172 PNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGLLDDARKVFDEIPD 231
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGK-- 263
R V+WN+L+ GYV NG +EA RL M GK
Sbjct: 232 RTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRVTVSTCLSASANMGGIEEGKQS 291
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D + T+++ + G +E + +F+ M EKD VTW +ISG+V
Sbjct: 292 HAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLV 351
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
E+A M R ++ + +TLSS++SA+A T L G ++ + ++ SD+ + ++
Sbjct: 352 EDAIHMCQLMRRGNLNFDCVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTA 411
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V +Y+KCG++VDA ++F + E++++ +N++++ +A+ GL EAL LF +M+ EG+ PN
Sbjct: 412 VEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNV 471
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
IT+ SV+ + G V E F M++ I P + M++ L + G EAI +
Sbjct: 472 ITWNSVILSLLRNGQVNEAKDMFLQMQS-SGISPNLISWTTMMNGLVQNGCSEEAIVYLR 530
Query: 493 SM 494
M
Sbjct: 531 KM 532
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 288/552 (52%), Gaps = 66/552 (11%)
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ N W A++ + + + F +F M G+ + + +++ +AC R +EG+Q
Sbjct: 84 QDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQ 143
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+HGL+ R D+ L N ++ +Y R G + A ++F M KRD+VS+NS+I GYV +G
Sbjct: 144 IHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGM 203
Query: 250 IEE----------------------------------AYRLFERMPGKDFVSWTTMITGF 275
++ A+ LFE MP +D +SW +MI G
Sbjct: 204 VKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGC 263
Query: 276 SSKGNLEKSIELFNMMPEKDDVTW-------------------------------TAIIS 304
G +E + LFN MP++D V+W A+++
Sbjct: 264 VKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMA 323
Query: 305 GFVNNEQYEEAFRWFIEML-RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
G+V N EA +F +ML RK++ P+ TL LSA A ++G +H ++
Sbjct: 324 GYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFS 383
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ +L+ +Y+KCG++ +A +F +ID+++I +N++I G A +GLGE A LF +M
Sbjct: 384 LSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEM 443
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
+ + P+ ITF+ VL+ACNH GLV+EG + F+ M+ ++ +EP +HY CMVDILGRAG
Sbjct: 444 EKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGH 503
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
+ EA + M EP VW LL A R H N + + A+HL+ ++ + + YV+LS++
Sbjct: 504 VEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNI 563
Query: 544 YSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
Y+ G D R+RM K + ++K PGCS I L+ VH F KS ++EI L ++
Sbjct: 564 YAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVREIYSMLDSL 623
Query: 604 SKGTKEFDWPKH 615
S E + KH
Sbjct: 624 SALNSEVAYCKH 635
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 218/459 (47%), Gaps = 30/459 (6%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPM--RNAVSYAAMITGFVR-RGMFYEA 57
M R S S+N+MI + + + A E+F MPM +N +S+ +MI+G+ R A
Sbjct: 183 MMKRDSVSFNSMIDGYVKHG-MVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVA 241
Query: 58 EELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
EL+ MP R D + N++I G +K G+ E A +F M ++DVV+W +MVDGY K G
Sbjct: 242 WELFEEMPKR--DLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGE 299
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFE 176
+ AR +FD+MPE++V++ AM+ GY++ + + F M R + ++ TL I
Sbjct: 300 IDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLS 359
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
A + + EGV +H + GF LG ++I MY + G +D A VF + +
Sbjct: 360 AIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDH 419
Query: 237 WNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
WN++I G +G E A+ LF M D +++ ++ + G +++ + F +M
Sbjct: 420 WNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMR 479
Query: 293 EKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
V + ++ EEA + F+E + + PN + ++LSA
Sbjct: 480 RVHKVEPKLQHYGCMVDILGRAGHVEEA-KKFVE--KMPIEPNDVVWRTLLSACRNHENF 536
Query: 348 NQGSQIHAHVVKM---NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
G + H++ + N S V + N +Y+ G D YRI + +R++ I
Sbjct: 537 TIGEPVAKHLISVDSYNPSSYVLLSN----IYAGFGMWNDVYRIRMMMKQRDL----KKI 588
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
G +Q L F + K V + L LSA N
Sbjct: 589 PGCSQIELEGNVHEFFVRDKSHPQVREIYSMLDSLSALN 627
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/630 (30%), Positives = 326/630 (51%), Gaps = 74/630 (11%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-----------PARWRD 70
SI+ A ++F P R + A++ + G + E L+ M P +
Sbjct: 186 SIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSV 245
Query: 71 SV----CSN-------ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
S+ C+ +I G+LK R ++ D+ +++D Y K G++
Sbjct: 246 SIALKSCAGLRKLLLGKVIHGFLKKVR-----------IDGDMFVGSALIDLYTKCGQMN 294
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEAC 178
+A ++F + P+ +VV WT+++ GY + E F M ++ + +TL + AC
Sbjct: 295 DAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 354
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ ++ G VHG V R G D + L NS++ +YG+ G + A+ +F MS +D +SW+
Sbjct: 355 AQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWS 414
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDF-VSWTTMIT------------------------ 273
++++ Y NG + LF M K +W T+++
Sbjct: 415 TMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNY 474
Query: 274 GFSSKGNL--------------EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
GF + + EK+++LFN MP+KD + W + SG+ +N E+ F
Sbjct: 475 GFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVF 534
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
ML RP+ + L +L+ + L Q +HA V+K E++ I SL+ +Y+KC
Sbjct: 535 RNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKC 594
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG-LVPNQITFLSV 438
++ DA ++F + +++V+++S+I+ + +G GEEAL LF +M + PN +TF+S+
Sbjct: 595 SSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISI 654
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSAC+H GL++EG F M Y ++P EHYA MVD+LGR G L A+D+IN+M +
Sbjct: 655 LSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQA 714
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
P +WGALLGA R H N+ + ++AA++L L+P+ A Y++LS++YSV ++R
Sbjct: 715 GPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRR 774
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
K KR+ K G S + LK++V F+AG +
Sbjct: 775 LVKEKRLNKIVGQSVVELKNEVRSFIAGDR 804
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 226/487 (46%), Gaps = 68/487 (13%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y + + A ++F + P + V W A++ Y CFE + LS+ R +S+++
Sbjct: 181 YARYASIHHAHKLFQETPHRTVYLWNALLRSY----CFEGEWVETLSLFRQMNNVSSVSI 236
Query: 172 ---------TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
+I ++C + G +HG + + D D+ +G+++I +Y + G M++A
Sbjct: 237 EERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDA 296
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS--------------- 267
KVF K D V W S+ISGY +G E A F RM + VS
Sbjct: 297 VKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQ 356
Query: 268 -------------------------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
+++ + G+++ + LF M +KD ++W+ +
Sbjct: 357 LSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM 416
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
++ + +N + F EML K ++PN +T+ SVL A A + L +G +IH V
Sbjct: 417 VACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGF 476
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
E + ++ +L+ +Y KC + A +F + +++++++ + SG+A NG+ E++ +FR
Sbjct: 477 EMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRN 536
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY----ACMVDIL 478
M G P+ I + +L+ + +G++++ + I+ G E+ A ++++
Sbjct: 537 MLSSGTRPDAIALVKILTTISELGILQQAVCLHA-----FVIKNGFENNQFIGASLIEVY 591
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPDSA 534
+ S+ +A + MT++ W +++ A G+ L L A H + +P++
Sbjct: 592 AKCSSIEDANKVFKGMTYKDVV-TWSSIIAAYGFHGQGEEALKLFYQMANH-SDTKPNNV 649
Query: 535 TPYVVLS 541
T +LS
Sbjct: 650 TFISILS 656
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 161/351 (45%), Gaps = 46/351 (13%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + G +D + + +Y R + A+K+F R WN+L+ Y G
Sbjct: 157 QLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEG 216
Query: 249 EIEEAYRLFERMPGKDFVS------------------------WTTMITGFSSK------ 278
E E LF +M VS +I GF K
Sbjct: 217 EWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGD 276
Query: 279 --------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM-L 323
G + ++++F P+ D V WT+IISG+ + E A +F M +
Sbjct: 277 MFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVV 336
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ V P+ +TL SV SA A + G +H V + +++ + + NSL+ LY K G++
Sbjct: 337 SEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIK 396
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+A +F + +++I+S+++M++ +A NG + L+LF +M D+ + PN +T +SVL AC
Sbjct: 397 NASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACA 456
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ +EEG + + Y E ++D+ + S +A+DL N M
Sbjct: 457 CISNLEEG-MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRM 506
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 111/255 (43%), Gaps = 30/255 (11%)
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
T I + V N + + W +E R+++ L +L + ++ SQ+H+
Sbjct: 114 THLIIFTKIVENSELLKFHEWLME--RRNL------LVKLLETCCSKLSI---SQLHSQC 162
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+K + D I L LY++ ++ A+++F R + +N+++ + G E L
Sbjct: 163 LKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETL 222
Query: 418 NLFRKMKDEGLV-----PNQITFLSVLSACNH-----VGLVEEGFIYFKSMKTLYNIEPG 467
+LFR+M + V P+ + L +C +G V GF+ K ++ ++ G
Sbjct: 223 SLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFL--KKVRIDGDMFVG 280
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV-WGALLGAGRTHLNLDLAKLAAQHL 526
+ ++D+ + G + +A+ + M + P V W +++ + +LA +
Sbjct: 281 ----SALIDLYTKCGQMNDAVKVF--MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRM 334
Query: 527 MELEPDSATPYVVLS 541
+ E S P ++S
Sbjct: 335 VVSEKVSPDPVTLVS 349
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 270/484 (55%), Gaps = 35/484 (7%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F ++ N WTAM+ GY + + + MRR G+ S T + LF+ACG
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157
Query: 184 YREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G QVH G F D+ +GNS+I +Y + GF+ A
Sbjct: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCAR------------------- 198
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
++F+ M +D VSWT +I ++ G++E + LF+ +P KD V WTA+
Sbjct: 199 ------------KVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAM 246
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH--AHVVKM 360
++G+ N + +EA +F +M + +++TL+ V+SA A + + I A
Sbjct: 247 VTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGF 306
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+V + ++L+ +YSKCG+ +AY++F + ERN+ SY+SMI G+A +G AL LF
Sbjct: 307 GPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLF 366
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
M + PN++TF+ +LSAC+H GLVE+G F M+ + + P P+HYACMVD+LGR
Sbjct: 367 HDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGR 426
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA+DL+ +M EP GVWGALLGA R H N D+A++AA L +LEP+ Y++L
Sbjct: 427 AGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILL 486
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD-KVHLFLAGRKSCLDLKEIEVT 599
S++Y+ G+ + +++R + K +K+PGCSW K+ ++H F AG + EI
Sbjct: 487 SNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQA 546
Query: 600 LQTI 603
L+ +
Sbjct: 547 LKQL 550
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 125/230 (54%), Gaps = 10/230 (4%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N++I Y+K G A ++F+ M E+DVV+W ++ Y K G + A +FD +P
Sbjct: 177 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 236
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
K++VAWTAMV GY + ++ + F M+ GM + +TL + AC + +
Sbjct: 237 SKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 296
Query: 190 VHGLVSRFGF--DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+ + R GF ++++G+++I MY + G DEA KVF +M +R+ S++S+I GY +
Sbjct: 297 IRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 356
Query: 248 GEIEEAYRLFERM------PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
G A +LF M P K V++ +++ S G +E+ +LF M
Sbjct: 357 GRAHSALQLFHDMLKTEIRPNK--VTFIGILSACSHAGLVEQGRQLFAKM 404
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR--IFTNIDERNIVSYNSMI 404
+Q Q+HAH+++ + + L+ + +K + +Y +F ++ N + +MI
Sbjct: 55 FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMI 114
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
G+A GL E+ N + +M+ +G+ P TF ++ AC
Sbjct: 115 RGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKAC 152
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-PARWR-DSVCSNALISGYL 82
EA+++F M RN SY++MI G+ G + A +L+ +M R + V ++S
Sbjct: 330 EAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACS 389
Query: 83 KVGRCEEAARIFEAMVEKDVVA-----WGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAW 136
G E+ ++F M + VA + MVD + G + EA ++ MP E N W
Sbjct: 390 HAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVW 449
Query: 137 TAMVDG---YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
A++ + D + + + G+ N I L+ ++ + GR+
Sbjct: 450 GALLGACRIHGNPDIAQIAANELFKLEPNGIG-NYILLSNIYASAGRW 496
>gi|297805312|ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316376|gb|EFH46799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 270/485 (55%), Gaps = 33/485 (6%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFF 182
+F+++P W ++ GY F + L + M R G A + T ++ + C
Sbjct: 62 VFERVPYPGTYLWNHLIKGYSNKFLFFETVSLLMRMMRTGFARPDEYTFPLVMKVCSNNA 121
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+R G VHGLV R GFD D++LG S + YG+ + A KVF M +R+ VSW +LI
Sbjct: 122 EFRVGSTVHGLVLRIGFDKDVVLGTSFVDFYGKCKDLCSARKVFGEMPERNVVSWTALIV 181
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT---- 298
YV +GE+EEA R+F+ MP ++ +W ++ G G+L + +LF+ MP++D ++
Sbjct: 182 AYVKSGELEEAKRMFDLMPERNLGTWNALVDGLVKSGDLVNARKLFDEMPKRDIISYTSM 241
Query: 299 ---------------------------WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
W+A+I G+ N Q EAF+ F EM K+V+P++
Sbjct: 242 IDGYAKGGDMVSARDLFENARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 301
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ ++SA + ++ +++ + MN S + +L+ + +KCG++ A ++F
Sbjct: 302 FIMVGLMSACSQMGCFELCEKVDSYLHQSMNKFSSHYVIPALIDMNAKCGHMDRAAKLFE 361
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ +R++VSY SM+ G A +G G EA+ LF KM DEG+VP+++ F +L C+ LVEE
Sbjct: 362 EMPQRDLVSYCSMMEGMAIHGCGSEAVRLFEKMVDEGIVPDEVAFTVILKVCSQSRLVEE 421
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G YF+ M+ Y+I P+HY+C+V++L R G L EA +LI SM FE WG+LLG
Sbjct: 422 GLRYFELMRKEYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGC 481
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
H N ++A++ A+ L ELEP SA YV+LS++Y+ + + D +R K I+K G
Sbjct: 482 SLHGNTEIAEVVARQLFELEPQSAGSYVLLSNIYAALDRWADLAHLRDKMNENGIKKICG 541
Query: 571 CSWII 575
SWII
Sbjct: 542 RSWII 546
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 175/367 (47%), Gaps = 50/367 (13%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR----WRDSVCSNALISGY 81
A ++F MP RN VS+ A+I +V+ G EA+ ++ MP R W NAL+ G
Sbjct: 161 ARKVFGEMPERNVVSWTALIVAYVKSGELEEAKRMFDLMPERNLGTW------NALVDGL 214
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+K G A ++F+ M ++D++++ SM+DGY K G ++ AR++F+ +V AW+A++
Sbjct: 215 VKSGDLVNARKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFENARGVDVRAWSALIL 274
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF--FRYREGVQ--VHGLVSRF 197
GY + + F +F M + + + L AC + F E V +H +++F
Sbjct: 275 GYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQSMNKF 334
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
Y I ++I M + G MD A K+F M +RD VS+ S++ G +G EA RLF
Sbjct: 335 SSHYVI---PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAVRLF 391
Query: 258 ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
E+M + V D+V +T I+ + EE R
Sbjct: 392 EKMVDEGIVP---------------------------DEVAFTVILKVCSQSRLVEEGLR 424
Query: 318 WFIEMLRKD--VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+F E++RK+ + + S +++ + T L + ++ + M E+ S SL+
Sbjct: 425 YF-ELMRKEYSILASPDHYSCIVNLLSRTGKLKEAYEL---IKSMPFEAHASAWGSLLGG 480
Query: 376 YSKCGNV 382
S GN
Sbjct: 481 CSLHGNT 487
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 172/397 (43%), Gaps = 81/397 (20%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
+D V + + Y K A ++F M E++VV+W +++ Y K G + EA+ +FD M
Sbjct: 140 KDVVLGTSFVDFYGKCKDLCSARKVFGEMPERNVVSWTALIVAYVKSGELEEAKRMFDLM 199
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
PE+N+ W A+VDG +K + LF M +
Sbjct: 200 PERNLGTWNALVDGLVKSGDLVNARKLFDEMPK--------------------------- 232
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
DII S+I Y + G M A +F D +W++LI GY NG
Sbjct: 233 ------------RDIISYTSMIDGYAKGGDMVSARDLFENARGVDVRAWSALILGYAQNG 280
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITG---------------------------FSSK--- 278
+ EA+++F M K+ ++ G FSS
Sbjct: 281 QPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQSMNKFSSHYVI 340
Query: 279 ----------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
G+++++ +LF MP++D V++ +++ G + EA R F +M+ + +
Sbjct: 341 PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAVRLFEKMVDEGIV 400
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+++ + +L + + + +G + + K ++ + + +V+L S+ G + +AY
Sbjct: 401 PDEVAFTVILKVCSQSRLVEEGLRYFELMRKEYSILASPDHYSCIVNLLSRTGKLKEAYE 460
Query: 388 IFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ ++ E + ++ S++ G + +G E A + R++
Sbjct: 461 LIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARQL 497
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/631 (30%), Positives = 340/631 (53%), Gaps = 48/631 (7%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVR----RGMFYEAEELYVNMPARWRDSVCSNAL--I 78
+A +F M +RN +++ +I G ++ +F A E+Y + + + CS L
Sbjct: 131 DAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYW-VGEEFNEHTCSVILQAC 189
Query: 79 SGYLKVGRCEE-AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ R E+ + + ++DV S++ Y + G + A +++ + K+V
Sbjct: 190 DSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLN 249
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
M+ Y K C E +FL + G+ N T T + AC +HG+ +
Sbjct: 250 FMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKC 309
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G +I +GN+I+++Y + G ++EA K F M +R+ VSW +L+SGYV NG ++A F
Sbjct: 310 GCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGF 369
Query: 258 ERM----PGKDFVSWTTMITGFSSKGNLEKSIEL-------------------------- 287
++ G D + T++ G S NL +++
Sbjct: 370 SQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKC 429
Query: 288 ---------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
F+ + +K+ V++ AI+SG++ ++ E+A F ++ D++P+ +T + +L
Sbjct: 430 RKLRSARLVFHSLLDKNIVSFNAILSGYIGADE-EDAMALFSQLRLADIKPDSVTFARLL 488
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
S SA A L +G +HA+++K E++ S+ N+++++Y+KCG++ DA ++F +++ + +
Sbjct: 489 SLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSI 548
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N++IS +A +G G +AL LF +MK E VP++IT LSVL AC++ GL+EEGF F M
Sbjct: 549 SWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDM 608
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
++ Y I+P EH+ACMVD+LGRAG L+EA+ IN F P +W L+ + H +L+
Sbjct: 609 ESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNF 668
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
++A++HL++L P+ A Y+++S+LY+ G + RVR ++ K G SWI + +
Sbjct: 669 GQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDN 728
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
KVH F+A K + KEI L + K+
Sbjct: 729 KVHQFVASDKDHPESKEIYAKLDLLKSEMKQ 759
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 227/456 (49%), Gaps = 46/456 (10%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ D ++V+ Y K ++ +A+ +FD+M +N + WT ++ G+++V+ E F +
Sbjct: 110 QNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIARE 169
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M G FN T +++ +AC G Q+HG V + GFD D+ +G S+I+MY R G
Sbjct: 170 MYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGD 229
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGY-------------VH------------------- 246
+ A KV+S ++ +D N +IS Y +H
Sbjct: 230 LGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISA 289
Query: 247 -NGEIE-EAYRLFERM-----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
NG+I+ E R+ M G + +++ + G LE++ + F M E++ V+W
Sbjct: 290 CNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSW 349
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TA++SG+V N ++A F ++L V + +++L + L G QIH VVK
Sbjct: 350 TALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVK 409
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE-ALN 418
+ DVS+ +L+ LY+KC + A +F ++ ++NIVS+N+++SG+ G EE A+
Sbjct: 410 LGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYI--GADEEDAMA 467
Query: 419 LFRKMKDEGLVPNQITFLSVLS-ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
LF +++ + P+ +TF +LS + + LV+ ++ +KT E P ++ +
Sbjct: 468 LFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKT--GFEANPSVGNAVITM 525
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+ GS+ +A L SM + W A++ A H
Sbjct: 526 YAKCGSIGDACQLFYSMNYLDSIS-WNAVISAYALH 560
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 152/295 (51%), Gaps = 12/295 (4%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP--AR 67
NA+++ + + + EA + F M RN VS+ A+++G+V+ G +A E + +
Sbjct: 319 NAIVSVYVKHG-MLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGV 377
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEARE 123
DS C L+ G + +I +V+ DV +++D Y K ++ AR
Sbjct: 378 GFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARL 437
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F + +KN+V++ A++ GY+ D ED LF +R + +S+T L
Sbjct: 438 VFHSLLDKNIVSFNAILSGYIGAD-EEDAMALFSQLRLADIKPDSVTFARLLSLSADQAC 496
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+G +H + + GF+ + +GN++ITMY + G + +A ++F M+ D++SWN++IS
Sbjct: 497 LVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISA 556
Query: 244 YVHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGNLEKSIELFNMMPEK 294
Y +G+ +A LFE M ++FV + +++ S G LE+ LFN M K
Sbjct: 557 YALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESK 611
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/464 (37%), Positives = 266/464 (57%), Gaps = 32/464 (6%)
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G+ N TL+ + +AC +G Q H + + GF+ D+++ +++ MY R
Sbjct: 5 GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARC------ 58
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
G +E+A +F++M + +W MITG + +++
Sbjct: 59 -------------------------GSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMK 93
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
K+++LF M E+D V+WTA+I+G+ N +E+ F +M + ++ ++ + SVLSA A
Sbjct: 94 KALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACA 153
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
A L G Q HA+VV+ D+ + ++LV +Y+K G++ DA ++F + +RN VS+NS
Sbjct: 154 DLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNS 213
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
+I+G AQ+G G +A+ LF +M G+ PN+I+F+ VLSAC+H GLV EG YF M Y
Sbjct: 214 IITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNY 273
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
I P HY CM+D+LGRAG L EA + IN M EP VWGALLGA R H N +LAK
Sbjct: 274 GIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRI 333
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
A+HL+ +E A YV+LS++Y+ G+ D +VR K + + K PG SWI +K +H
Sbjct: 334 AEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHA 393
Query: 583 FLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
F+AG S LKEI L+++S+ K + P ++ L +E D
Sbjct: 394 FVAGETSHPQLKEIHEFLESLSRKMKAAGYVPNKNFVLQDVEDD 437
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 182/388 (46%), Gaps = 29/388 (7%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V AL+ Y + G E+A +F+ M E+ W +M+ G+ + + +A ++F +M
Sbjct: 44 DVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMS 103
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E++VV+WTA++ GY + ++ ++F MR+ GM + + + AC G Q
Sbjct: 104 ERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQ 163
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
H V + GF DI++G++++ MY + G M++A +VF M +R+ VSWNS+I+G +G
Sbjct: 164 FHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGR 223
Query: 250 IEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEK-----DDVTWT 300
+A LFE+M +S+ +++ S G + + FN+M + D +T
Sbjct: 224 GNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYT 283
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+I +EA + M V P+ ++L A +I H++ M
Sbjct: 284 CMIDLLGRAGCLDEAENFINGM---PVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGM 340
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI--------VSYNSMISGFAQNGL 412
++ I L ++Y+ G DA ++ + +R + + +++ F
Sbjct: 341 EVQI-AGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGET 399
Query: 413 GEEAL--------NLFRKMKDEGLVPNQ 432
L +L RKMK G VPN+
Sbjct: 400 SHPQLKEIHEFLESLSRKMKAAGYVPNK 427
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 134/256 (52%), Gaps = 41/256 (16%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M+ K V+PNQ TLS+V+ A A+ A+L QG Q H +++KM ESDV +Q +LV +Y++CG+
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 382 VVD-------------------------------AYRIFTNIDERNIVSYNSMISGFAQN 410
+ D A ++F + ER++VS+ ++I+G+AQN
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---FIYFKSMKTLYNIEPG 467
G G+E+LN+F +M+ G+ ++ SVLSAC + +E G Y +I G
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
+ +VD+ ++GS+ +A + + M + W +++ H + A L + ++
Sbjct: 181 ----SALVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQHGRGNDAVLLFEQML 235
Query: 528 E--LEPDSATPYVVLS 541
+ ++P+ + VLS
Sbjct: 236 QAGIKPNEISFVGVLS 251
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 15/273 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M++R++ ++NAMIT N + +A ++F M R+ VS+ A+I G+ + G Y E L
Sbjct: 71 MSERSTRTWNAMITGHAQNR-DMKKALKLFYEMSERDVVSWTAVIAGYAQNG--YGDESL 127
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAA----RIFEAMVEK-----DVVAWGSMVDG 111
V R + + S+ I G + + AA R F A V + D+V ++VD
Sbjct: 128 NVFNQMR-KTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDM 186
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G + +A ++FDKMP++N V+W +++ G + D LF M + G+ N I+
Sbjct: 187 YAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISF 246
Query: 172 TILFEACGRFFRYREGVQVHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEA-NKVFSMM 229
+ AC EG L+++ +G D+ +I + GR G +DEA N + M
Sbjct: 247 VGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMP 306
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ D W +L+ +G E A R+ E + G
Sbjct: 307 VEPDVSVWGALLGACRIHGNTELAKRIAEHLLG 339
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 321/602 (53%), Gaps = 46/602 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M+ R + SYNAMITA +++ + A ++F M V + + EE
Sbjct: 90 MSIRDTVSYNAMITAFSHSH-DGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEET 148
Query: 61 YVNMPA----RWRD-SVCS--NALISGYLK------VGRC---EEAARIFEAMV--EKDV 102
+ +W SV S NAL+S Y+ V C A ++F+ +D
Sbjct: 149 HCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDE 208
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
AW +++ GY + ++ ARE+ + M + VAW AM+ GY+ +E+ FDL M
Sbjct: 209 PAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSL 268
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G+ + T T + A + G QVH V R +++ G F+
Sbjct: 269 GIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLR-----------TVVQPSGH--FVLSV 315
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
N N+LI+ Y G++ EA R+F++MP KD VSW +++G + +E
Sbjct: 316 N--------------NALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIE 361
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
++ +F MP + +TWT +ISG N EE + F +M + + P + +++ +
Sbjct: 362 EANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCS 421
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+L+ G Q+H+ ++++ +S +S+ N+L+++YS+CG V A +F + + VS+N+
Sbjct: 422 VLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNA 481
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
MI+ AQ+G G +A+ L+ KM E ++P++ITFL++LSAC+H GLV+EG YF +M+ Y
Sbjct: 482 MIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCY 541
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
I P +HY+ ++D+L RAG +EA ++ SM FEP +W ALL H N++L A
Sbjct: 542 GITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQA 601
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
A L+EL P Y+ LS++Y+ +G+ + RVR + + ++K PGCSWI +++ VH+
Sbjct: 602 ADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHV 661
Query: 583 FL 584
FL
Sbjct: 662 FL 663
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 195/402 (48%), Gaps = 67/402 (16%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF----LSMRRGG 163
++D YCK + AR +FDK+P+ ++VA T M+ Y + LF +S+R
Sbjct: 37 LIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIR--- 93
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM-DE- 221
++++ + A +Q+ + R GF D +S++ G L + DE
Sbjct: 94 ---DTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVL---GALSLIADEE 147
Query: 222 --ANKVFSMMSKRDAVS----WNSLISGYVHNGE---------IEEAYRLFERMPG--KD 264
++ + K A+S N+L+S YV + A +LF+ P +D
Sbjct: 148 THCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRD 207
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+WTT+I G+ +L + EL M + V W A+ISG+V+ YEEAF M
Sbjct: 208 EPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHS 267
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD----VSIQNSLVSLYSKCG 380
++ ++ T +SV+SA++ N G Q+HA+V++ ++ +S+ N+L++LY++CG
Sbjct: 268 LGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCG 327
Query: 381 NVVDAYRIFTNIDERNIVSYNS-------------------------------MISGFAQ 409
+V+A R+F + +++VS+N+ MISG AQ
Sbjct: 328 KLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQ 387
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
NG GEE L LF +MK EGL P + +++C+ +G ++ G
Sbjct: 388 NGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNG 429
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 147/321 (45%), Gaps = 55/321 (17%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE--KD 295
N LI Y + I A LF+++P D V+ TTM++ +S+ GN++ + +LFN P +D
Sbjct: 35 NRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRD 94
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA-TLNQGSQIH 354
V++ A+I+ F ++ A + F++M R P+ T SSVL A + A Q+H
Sbjct: 95 TVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLH 154
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCG---------------------------------- 380
V K S S+ N+L+S Y C
Sbjct: 155 CEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTI 214
Query: 381 --------NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
++V A + + + V++N+MISG+ G EEA +L R+M G+ ++
Sbjct: 215 IAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDE 274
Query: 433 ITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYA-----CMVDILGRAGSLAE 486
T+ SV+SA ++ GL G ++ ++T+ ++P H+ ++ + R G L E
Sbjct: 275 YTYTSVISAASNAGLFNIGRQVHAYVLRTV--VQPS-GHFVLSVNNALITLYTRCGKLVE 331
Query: 487 AIDLINSMTFEPPPGVWGALL 507
A + + M + W A+L
Sbjct: 332 ARRVFDKMPVKDLVS-WNAIL 351
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/614 (28%), Positives = 328/614 (53%), Gaps = 46/614 (7%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCSN--ALISGYLKVGRCEEAARIFEAMVE-- 99
+++ + + G F E+ L+ M C ++ + +G+ +E R+ +++
Sbjct: 166 LMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG 225
Query: 100 --KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
+ S++ Y K G V A +FD++ E +VV+W +M++G + +G ++F+
Sbjct: 226 FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFI 285
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
M G+ + TL + AC G +HG + F +++ N+++ MY + G
Sbjct: 286 QMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCG 345
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------- 260
++ A +VF M VSW S+I+ YV G +A LF+ M
Sbjct: 346 NLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVH 405
Query: 261 ---------PGKDFVSWT-------------TMITGFSSKGNLEKSIELFNMMPEKDDVT 298
G+D S+ +I ++ G++E++ +F+ +P KD V+
Sbjct: 406 ACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVS 465
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W +I G+ N EA F++M +K +P+ +T++ VL A A A L++G +IH H++
Sbjct: 466 WNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHIL 524
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ SD+ + +LV +Y+KCG +V A +F I +++++S+ MI+G+ +G G EA++
Sbjct: 525 RRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAIS 584
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F +M+ G+ P++ +F ++L+AC+H GL+ EG+ +F SM+ +EP EHYAC+VD+L
Sbjct: 585 TFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLL 644
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
R G+L++A I SM +P +WG LL R H ++ LA+ A+H+ ELEPD+ YV
Sbjct: 645 ARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYV 704
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
VL+++Y+ K + ++R + + + +++PGCSWI + K ++F+AG K+I+V
Sbjct: 705 VLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDV 764
Query: 599 TLQTISKGTKEFDW 612
L ++ + D+
Sbjct: 765 LLSKLTMQMQNEDY 778
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 239/515 (46%), Gaps = 79/515 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D L+ Y+ G + +IF+ ++ V W ++ Y K G E+ +F KM
Sbjct: 128 DEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQ 187
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ VV N T T + + + +E +
Sbjct: 188 KLGVVG-------------------------------NCYTFTCVLKCFAALGKVKECKR 216
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG V + GF + + NS+I Y + G ++ A+ +F +S+ D VSWNS+I+G V NG
Sbjct: 217 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 276
Query: 250 IEEAYRLFERMP---------------------------------------GKDFVSWTT 270
+F +M ++ V T
Sbjct: 277 SGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNT 336
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
++ +S GNL + E+F M + V+WT+II+ +V Y +A F EM K VRP+
Sbjct: 337 LLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPD 396
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T++S++ A A +++L++G +H++V+K M S++ + N+L+++Y+KCG+V +A +F+
Sbjct: 397 IYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFS 456
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
I ++IVS+N+MI G++QN L EAL LF M+ + P+ IT VL AC + +++
Sbjct: 457 KIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDK 515
Query: 451 GF-IYFKSMKTLYNIEPGPEHYAC-MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
G I+ ++ Y + H AC +VD+ + G L A L+ M + W ++
Sbjct: 516 GREIHGHILRRGYFSDL---HVACALVDMYAKCGLLVLA-QLLFDMIPKKDLISWTVMIA 571
Query: 509 AGRTH--LNLDLAKLAAQHLMELEPDSATPYVVLS 541
H N ++ + +EPD ++ +L+
Sbjct: 572 GYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILN 606
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 39/317 (12%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C +G +VH ++ G D LG ++ MY G + + K+F +
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 159
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMP-------------------------------- 261
WN L+S Y G E+ LF++M
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 219
Query: 262 -------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
G + ++I + G +E + LF+ + E D V+W ++I+G V N
Sbjct: 220 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 279
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
FI+ML V + TL SVL A A L+ G +H VK +V N+L+
Sbjct: 280 GLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 339
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSKCGN+ A +F + + IVS+ S+I+ + + GL +A+ LF +M+ +G+ P+ T
Sbjct: 340 MYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 399
Query: 435 FLSVLSACNHVGLVEEG 451
S++ AC +++G
Sbjct: 400 VTSIVHACACSSSLDKG 416
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 165/351 (47%), Gaps = 21/351 (5%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-------WRDSVCSNALI 78
A E+F M VS+ ++I +VR G++ +A L+ M ++ S+
Sbjct: 350 ATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACAC 409
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
S L GR + + + + + ++ ++++ Y K G V EAR +F K+P K++V+W
Sbjct: 410 SSSLDKGR-DVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNT 468
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY + + +LFL M++ + IT+ + AC +G ++HG + R G
Sbjct: 469 MIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRG 527
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ D+ + +++ MY + G + A +F M+ K+D +SW +I+GY +G EA F
Sbjct: 528 YFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFN 587
Query: 259 --RMPG--KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNN 309
R+ G D S++ ++ S G L + + FN M + V + ++
Sbjct: 588 EMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARM 647
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+A++ FIE + ++P+ +LS + ++ H+ ++
Sbjct: 648 GNLSKAYK-FIESM--PIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFEL 695
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 316 FRWFIEMLRKDVRPNQLTLSS---VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
R IE+L K + +L L+S VL A +L G ++H+ ++ + D ++ L
Sbjct: 77 LRNAIELLTKS-KSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKL 135
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V +Y CG++V +IF I + +N ++S +A+ G E+++LF+KM+ G+V N
Sbjct: 136 VFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNC 195
Query: 433 ITFLSVLSACNHVGLVEE 450
TF VL +G V+E
Sbjct: 196 YTFTCVLKCFAALGKVKE 213
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 306/585 (52%), Gaps = 47/585 (8%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM---PMRNA---------VSYAAMITGF 48
M +R +N+MI + N S EA +F + P+ + V A G
Sbjct: 129 MPNRNGVVWNSMIHSYARNG-SPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGE 187
Query: 49 VRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
++ G A L NM DSV +++LI+ Y K G + A + M E D + ++
Sbjct: 188 IQCGKQIHARILIDNMEL---DSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSAL 244
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
+ GY GR+ +AR F + VV W +++ GY+ + + F LF M++ G+ +
Sbjct: 245 ITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDF 304
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
TL + AC + G Q+H + G D ++ ++ I Y + G +++A K+FS
Sbjct: 305 STLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSE 364
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
+ D + NS+I+ Y ++G+IE+A ++F MP K +SW +MI G S G ++++LF
Sbjct: 365 LKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLF 424
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
MM + D+R N+ L+SV+SA A+ ++L
Sbjct: 425 CMMN-------------------------------KLDLRMNRFNLTSVISACASISSLE 453
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G QI A + ++SD I SLV Y KCG + ++F + + + +S+NSM+ G+A
Sbjct: 454 LGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYA 513
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
NG G EAL LF +M+ G+ P +ITF VLSAC+H GLV+EG+ +F M+ Y+I+PG
Sbjct: 514 TNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDPGI 573
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
EHY+CMVD+ RAG L EA++LI M FE +W ++L H DL + AQ ++E
Sbjct: 574 EHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVAQQIIE 633
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
L+P+++ YV LS +++ G VR + ++++K PG SW
Sbjct: 634 LDPENSGAYVQLSSIFATSGDWESSALVRKVMQERQVQKYPGYSW 678
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 222/485 (45%), Gaps = 68/485 (14%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV 103
++ + R G +A +L+ MP R + N +I GY+K G E + R+F+ M K+
Sbjct: 47 LLQMYTRCGSMTDAHKLFDEMPHR--NCFSWNTMIEGYMKSGNKERSIRLFDMMSNKNDY 104
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
+W + G+ K G + AR +F++MP +N V W +M+ Y + + LF +
Sbjct: 105 SWNVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDP 164
Query: 164 M---AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+ ++ L + AC + G Q+H + + D +L +S+I +YG+ G +D
Sbjct: 165 LDKSCCDTFVLATVIGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLD 224
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
A+ V + M + D S ++LI+GY ++G + +A R F R V W ++I+
Sbjct: 225 SAHCVLNTMEEPDDFSLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLIS------- 277
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
G+V N + EAF F +M +K ++ + TL+++LSA
Sbjct: 278 ------------------------GYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSA 313
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN------------------- 381
++ G Q+HA+ K+ + D + ++ + YSKCG+
Sbjct: 314 CSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILL 373
Query: 382 ------------VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+ DA +IF + ++++S+NSMI G +QNG EAL+LF M L
Sbjct: 374 NSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLR 433
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
N+ SV+SAC + +E G F + T+ ++ +VD + G +
Sbjct: 434 MNRFNLTSVISACASISSLELGEQIF-ARATVVGLDSDEVISTSLVDFYCKCGFIEIGRK 492
Query: 490 LINSM 494
L ++M
Sbjct: 493 LFDTM 497
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 167/359 (46%), Gaps = 64/359 (17%)
Query: 185 REGVQVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+G Q+H L + G + L N ++ MY R G M +A+K+F M R+ SWN++I G
Sbjct: 22 HQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEG 81
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
Y+ +G E + RLF+ M K+ SW + +GF+ G +E + LFN MP ++ V W ++I
Sbjct: 82 YMKSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNSMI 141
Query: 304 SGFVNNEQYEEAFRWFIEM----LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+ N EA R F E+ L K + L++V+ A + G QIHA ++
Sbjct: 142 HSYARNGSPREAVRLFKELNLDPLDKSC-CDTFVLATVIGACTDLGEIQCGKQIHARILI 200
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN----------------------- 396
NME D + +SL++LY KCG++ A+ + ++E +
Sbjct: 201 DNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYANHGRMNDARRA 260
Query: 397 --------IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
+V +NS+ISG+ N EA LF M+ +GL + T ++LSAC+ +
Sbjct: 261 FYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCNS 320
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMV-------------DILGRAGSLAEAIDLINSM 494
+ G K M YAC V D + GSL +A L + +
Sbjct: 321 QHG----KQMHA----------YACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSEL 365
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 293/545 (53%), Gaps = 41/545 (7%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++D Y K G V+ AR++FD++P +++VAW +M+ Y++ ++ D++ M G+ +
Sbjct: 116 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPD 175
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDY-DIILGNSIITMYGRLGFMDEANKVF 226
T + +F+A EG + HG G ++ +G++++ MY + G M +A V
Sbjct: 176 EFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVS 235
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF--------------------- 265
+ +D V + +LI GY H+GE E+ ++F M K
Sbjct: 236 DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLT 295
Query: 266 ------------------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
S T+++T + G ++ S+++F + VTWT++I G V
Sbjct: 296 SGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLV 355
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N + E A F +MLR + PN TLSSVL A ++ A L QG QIHA V+K ++ D
Sbjct: 356 QNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKY 415
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ +L+ Y KCG+ A +F + E ++VS NSMI +AQNG G EAL LF MKD G
Sbjct: 416 VGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTG 475
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
L PN +T+L VLSACN+ GL+EEG F S + NIE +HYACMVD+LGRAG L EA
Sbjct: 476 LEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEA 535
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
LIN + +W LL A R H ++++AK +++L P+ +V+LS+LY+
Sbjct: 536 EMLINQVNISDVV-IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYAST 594
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGT 607
G ++ + R++K+P SW+ ++ ++H F+AG S + ++I L+ + +
Sbjct: 595 GNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKV 654
Query: 608 KEFDW 612
KE +
Sbjct: 655 KELGY 659
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 171/348 (49%), Gaps = 47/348 (13%)
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+Q H L + GF + LGN +I Y + G + A KVF + R V+WNS+I+ Y+ N
Sbjct: 99 IQSHAL--KRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRN 154
Query: 248 GEIEEAYRLFERM-PG---KDFVSWTTMITGFSSKGNLE-------KSIEL--------- 287
G +EA +++RM P D +++++ FS G + +S+ L
Sbjct: 155 GRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFV 214
Query: 288 ----------FNMMPE----------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
F M + KD V +TA+I G+ ++ + E+ + F M +K +
Sbjct: 215 GSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGI 274
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
N+ TLSSVL L G IH +VK +ES V+ Q SL+++Y +CG V D+ +
Sbjct: 275 EANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLK 334
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F N V++ S+I G QNG E AL FR+M + PN T SVL AC+ + +
Sbjct: 335 VFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAM 394
Query: 448 VEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+E+G I+ MK + ++ A ++D G+ GS A + N +
Sbjct: 395 LEQGKQIHAIVMK--FGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL 440
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 198/463 (42%), Gaps = 48/463 (10%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PAR 67
N +I A + +Y A ++F +P R+ V++ +MI ++R G EA ++Y M
Sbjct: 114 NKLIDAYLKCGSVVY-ARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGI 172
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAR 122
D +++ + +G E R V +V ++VD Y K G++ +AR
Sbjct: 173 LPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDAR 232
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+ D++ K+VV +TA++ GY + +F +M + G+ N TL+ + CG
Sbjct: 233 LVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLE 292
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G +HGL+ + G + + S++TMY R G +D++ KVF + V+W S+I
Sbjct: 293 DLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIV 352
Query: 243 GYVHNGEIEEAYRLFERM--------------------------PGK------------- 263
G V NG E A F +M GK
Sbjct: 353 GLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDI 412
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
D +I + G+ E + +FN + E D V+ ++I + N EA + F M
Sbjct: 413 DKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMK 472
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNV 382
+ PN +T VLSA L +G I + N+E +V L + G +
Sbjct: 473 DTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRL 532
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+A + ++ ++V + +++S +G E A + ++ D
Sbjct: 533 KEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVID 575
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
SS++ ++ ++I +H +K S+ N L+ Y KCG+VV A ++F +
Sbjct: 81 SSLIQQCIGIKSITDITKIQSHALKRGFHH--SLGNKLIDAYLKCGSVVYARKVFDEVPH 138
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
R+IV++NSMI+ + +NG +EA++++++M +G++P++ TF SV A + +GLV EG
Sbjct: 139 RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEG 195
>gi|302760807|ref|XP_002963826.1| hypothetical protein SELMODRAFT_79356 [Selaginella moellendorffii]
gi|300169094|gb|EFJ35697.1| hypothetical protein SELMODRAFT_79356 [Selaginella moellendorffii]
Length = 535
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/561 (31%), Positives = 302/561 (53%), Gaps = 50/561 (8%)
Query: 17 INNNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN 75
+ N C ++ EA + F +MP++++VS+ M++ + + G +A+ L+ ++P W+ C N
Sbjct: 9 LQNLCGNVQEARKFFDSMPLQDSVSWTIMVSAYAQGGHIEQAKNLFESLP--WKSLACEN 66
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
A++ Y G E A +F+ M ++DVV+W +M+ Y + G +A+ +FD+ KN+++
Sbjct: 67 AMLQAYSLNGDLENAKLVFDRMTKRDVVSWTTMIGAYAQNGYAFDAKSLFDRFERKNIIS 126
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WTAMV Y + F+ ++F M +
Sbjct: 127 WTAMVHAYSQNKSFDLAREMFERMPQ---------------------------------- 152
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+D+ N +++ Y G ++ A F M RD V+WNS+I+ + G++EEA
Sbjct: 153 -----HDVFSWNILLSAYAHNGHLESAKIAFERMPSRDVVAWNSIIAFFSQKGKLEEAKE 207
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY--- 312
LF MP + +W MI + +L+ + LF+ MP +D ++WT +++ + +
Sbjct: 208 LFHLMPEPNTAAWNVMIQANAQAWHLDVAKGLFDQMPSRDVISWTTLMNSYADMSNLDGC 267
Query: 313 -EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VSIQN 370
E A F M V P+ +T ++ A + A +GS A +V + D V + N
Sbjct: 268 QESAMDVFRLMDLHGVSPDSVTYIAIFDACSRIANAEEGSAFIASIVHPGILQDSVVVGN 327
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+ +++Y + G A+ +F + R+ VS+N+M++ FA+NG GE AL++F M+ EGLVP
Sbjct: 328 AALTMYGRSGLAAGAWSVFQQMPVRDSVSWNAMLTAFARNGHGEAALDVFLAMELEGLVP 387
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+ ITF++VLSAC+H GL+ YF S+ Y + P +HY C+ D+L R+G L EA +L
Sbjct: 388 DIITFVNVLSACSHAGLLHRARGYFHSISRDYGLTPIYDHYVCLTDLLARSGRLVEAEEL 447
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
+NSM FEP W ALLGA R+H ++ AA ++ + D+ +PY++LS LY+ G K
Sbjct: 448 VNSMPFEPNYEAWMALLGACRSHGDVRRGNRAAGFFVQADVDAESPYILLSHLYAEAGSK 507
Query: 551 RDGNRVR--MKKKLKRIRKSP 569
D +R M++K K + +SP
Sbjct: 508 DDVLVIRKAMRRKTK-LDQSP 527
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 43/329 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+ MI A N + ++A +F +N +S+ AM+ + + F A E+
Sbjct: 88 MTKRDVVSWTTMIGAYAQNGYA-FDAKSLFDRFERKNIISWTAMVHAYSQNKSFDLAREM 146
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP D N L+S Y G E A FE M +DVVAW S++ + +KG++ E
Sbjct: 147 FERMPQ--HDVFSWNILLSAYAHNGHLESAKIAFERMPSRDVVAWNSIIAFFSQKGKLEE 204
Query: 121 ARE-------------------------------IFDKMPEKNVVAWTAMVDGYMKVD-- 147
A+E +FD+MP ++V++WT +++ Y +
Sbjct: 205 AKELFHLMPEPNTAAWNVMIQANAQAWHLDVAKGLFDQMPSRDVISWTTLMNSYADMSNL 264
Query: 148 --CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD-II 204
C E D+F M G++ +S+T +F+AC R EG + G D ++
Sbjct: 265 DGCQESAMDVFRLMDLHGVSPDSVTYIAIFDACSRIANAEEGSAFIASIVHPGILQDSVV 324
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK- 263
+GN+ +TMYGR G A VF M RD+VSWN++++ + NG E A +F M +
Sbjct: 325 VGNAALTMYGRSGLAAGAWSVFQQMPVRDSVSWNAMLTAFARNGHGEAALDVFLAMELEG 384
Query: 264 ---DFVSWTTMITGFSSKGNLEKSIELFN 289
D +++ +++ S G L ++ F+
Sbjct: 385 LVPDIITFVNVLSACSHAGLLHRARGYFH 413
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 171/416 (41%), Gaps = 103/416 (24%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK--- 263
NS + + G + EA K F M +D+VSW ++S Y G IE+A LFE +P K
Sbjct: 4 NSALQLQNLCGNVQEARKFFDSMPLQDSVSWTIMVSAYAQGGHIEQAKNLFESLPWKSLA 63
Query: 264 ----------------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
D VSWTTMI ++ G + LF+ K+
Sbjct: 64 CENAMLQAYSLNGDLENAKLVFDRMTKRDVVSWTTMIGAYAQNGYAFDAKSLFDRFERKN 123
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
++WTA++ + N+ ++ A F M + DV + + +LSA A L A
Sbjct: 124 IISWTAMVHAYSQNKSFDLAREMFERMPQHDV----FSWNILLSAYAHNGHLES-----A 174
Query: 356 HVVKMNMES-DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ----- 409
+ M S DV NS+++ +S+ G + +A +F + E N ++N MI AQ
Sbjct: 175 KIAFERMPSRDVVAWNSIIAFFSQKGKLEEAKELFHLMPEPNTAAWNVMIQANAQAWHLD 234
Query: 410 ------------------------------NGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+G E A+++FR M G+ P+ +T++++
Sbjct: 235 VAKGLFDQMPSRDVISWTTLMNSYADMSNLDGCQESAMDVFRLMDLHGVSPDSVTYIAIF 294
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV-----DILGRAGSLAEAIDLINSM 494
AC+ + EEG + S+ + PG + +V + GR+G A A + M
Sbjct: 295 DACSRIANAEEGSAFIASI-----VHPGILQDSVVVGNAALTMYGRSGLAAGAWSVFQQM 349
Query: 495 TFEPPPGVWGALL------GAGRTHLNLDLAKLAAQHLMELE---PDSATPYVVLS 541
W A+L G G L++ LA MELE PD T VLS
Sbjct: 350 PVRDSVS-WNAMLTAFARNGHGEAALDVFLA-------MELEGLVPDIITFVNVLS 397
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 289/543 (53%), Gaps = 41/543 (7%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
M+ Y + G + R+ FD+MP ++V+W A++ Y+ F+ + F M G+
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ ++I AC G + + G + + I+ ++++MYG+LG +A VF
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK------------------ 263
MS RD V+W+++++ Y NG EA LF +M P K
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180
Query: 264 ---------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
V T ++ + G +E ++E F + EK+ V W+AI + +
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH--AHVVKMNMESDV 366
N++ +A R M + + PN T SVL A AA A L QG +IH V+ +ESDV
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ +LV++YSKCGN+ A +F I ++V +NS+I+ AQ+G E+AL LF +M+ E
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
GL P ITF SVL AC+H G++++G +F S + I P EH+ CMVD+LGRAG + +
Sbjct: 361 GLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVD 420
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
+ DL+ M FEP P W A LGA RT+ N+D A AA++L +L+P PYV+LS++Y+
Sbjct: 421 SEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAK 480
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKG 606
G+ D R+R +L K G SWI +KD+VH F++G + EI LQ ++K
Sbjct: 481 AGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKL 540
Query: 607 TKE 609
KE
Sbjct: 541 MKE 543
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 170/384 (44%), Gaps = 52/384 (13%)
Query: 17 INNNCSIYEAFEIFATMPMRNAVSYAAMITGFV------RRGMFYEAEELYVNMPARWRD 70
I N ++ +AF+ MP+ + VS+ A+I ++ R +F+ L P
Sbjct: 8 IGNIPAVRKAFD---EMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGI 64
Query: 71 SVCSNALISGY-LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
S+ +A + +GR + A I +E++ + ++V Y K G +A +F +M
Sbjct: 65 SIFLSACTDAREITIGRSIQLA-ILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMS 123
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
++VVAW+AMV Y + + LF M G+A N +TL +AC R G
Sbjct: 124 HRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGAL 183
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H V G +++G +++ +YG+ G ++ A + F + +++ V+W+++ + Y N
Sbjct: 184 MHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDR 243
Query: 250 IEEAYRLFERMP-------GKDFVS----------------------------------W 268
+A R+ RM FVS
Sbjct: 244 NRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVL 303
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T ++ +S GNL + ++F+ + D V W ++I+ + Q E+A F M + ++
Sbjct: 304 TALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQ 363
Query: 329 PNQLTLSSVLSASAATATLNQGSQ 352
P +T +SVL A + L+QG +
Sbjct: 364 PTIITFTSVLFACSHAGMLDQGRK 387
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 142/295 (48%), Gaps = 25/295 (8%)
Query: 14 TALIN-----NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
TAL++ +C+ +A +F M R+ V+++AM+ + R G EA L+ M
Sbjct: 100 TALVSMYGKLGHCT--DAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDL-- 155
Query: 69 RDSVCSN--ALISGY---LKVGRCEEAA----RIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
D V N L+SG +G A R+ ++ VV ++V+ Y K GR+
Sbjct: 156 -DGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIE 214
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
A E F ++ EKNVVAW+A+ Y + D D + M G+ NS T + +AC
Sbjct: 215 AAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACA 274
Query: 180 RFFRYREGVQVHGLVSRF--GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
++G ++H G + D+ + +++ MY + G + A +F ++ D V W
Sbjct: 275 AIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLW 334
Query: 238 NSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELF 288
NSLI+ +G+ E+A LFERM +++T+++ S G L++ + F
Sbjct: 335 NSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHF 389
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/513 (36%), Positives = 290/513 (56%), Gaps = 9/513 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++D Y K G V+ AR++FD++P +++VAW +M+ Y++ ++ D++ M G+ +
Sbjct: 117 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPD 176
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDY-DIILGNSIITMYGRLGFMDEANKVF 226
T + +F+A EG + HG G ++ +G++++ MY + G M +A V
Sbjct: 177 EFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVS 236
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF-VSWTTMITGFSSKGNLE--K 283
+ +D V + +LI GY H+GE E+ ++F M K + T+ + GNLE
Sbjct: 237 DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLT 296
Query: 284 SIELFNMMPEK----DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
S L + + K VTWT++I G V N + E A F +MLR + PN TLSSVL
Sbjct: 297 SGRLIHGLIVKAGLESAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLR 356
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A ++ A L QG QIHA V+K ++ D + +L+ Y KCG+ A +F + E ++VS
Sbjct: 357 ACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVS 416
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
NSMI +AQNG G EAL LF MKD GL PN +T+L VLSACN+ GL+EEG F S +
Sbjct: 417 VNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSAR 476
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
NIE +HYACMVD+LGRAG L EA LIN + +W LL A R H ++++A
Sbjct: 477 NSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVV-IWRTLLSACRIHGDVEMA 535
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
K +++L P+ +V+LS+LY+ G ++ + R++K+P SW+ ++ +
Sbjct: 536 KRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVERE 595
Query: 580 VHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+H F+AG S + ++I L+ + + KE +
Sbjct: 596 IHTFMAGDWSHPNFRDIREKLEELIEKVKELGY 628
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 152/348 (43%), Gaps = 79/348 (22%)
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+Q H L + GF + LGN +I Y + G + A KVF + R V+WNS+I+ Y+ N
Sbjct: 100 IQSHAL--KRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRN 155
Query: 248 GEIEEAYRLFERM-PG---KDFVSWTTMITGFSSKGNLE-------KSIEL--------- 287
G +EA +++RM P D +++++ FS G + +S+ L
Sbjct: 156 GRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFV 215
Query: 288 ----------FNMMPE----------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
F M + KD V +TA+I G+ ++ + E+ + F M +K +
Sbjct: 216 GSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGI 275
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
N+ TLSSVL L G IH +VK +ES
Sbjct: 276 EANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLES----------------------- 312
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
V++ S+I G QNG E AL FR+M + PN T SVL AC+ + +
Sbjct: 313 ---------AVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAM 363
Query: 448 VEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+E+G I+ MK + ++ A ++D G+ GS A + N +
Sbjct: 364 LEQGKQIHAIVMK--FGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL 409
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 184/465 (39%), Gaps = 84/465 (18%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PAR 67
N +I A + +Y A ++F +P R+ V++ +MI ++R G EA ++Y M
Sbjct: 115 NKLIDAYLKCGSVVY-ARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGI 173
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVE-----KDVVAWGSMVDGYCKKGRVIEAR 122
D +++ + +G E R V +V ++VD Y K G++ +AR
Sbjct: 174 LPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDAR 233
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDG--FDLFLSMRRGGMAFNSITLTILFEACGR 180
+ D++ K+VV +TA++ GY EDG +F +M + G+ N TL+ + CG
Sbjct: 234 LVSDQVVGKDVVLFTALIVGYSHHG--EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGN 291
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G +HGL+ + G + AV+W S+
Sbjct: 292 LEDLTSGRLIHGLIVKAGLE--------------------------------SAVTWTSV 319
Query: 241 ISGYVHNGEIEEAYRLFERM--------------------------PGK----------- 263
I G V NG E A F +M GK
Sbjct: 320 IVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGL 379
Query: 264 --DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
D +I + G+ E + +FN + E D V+ ++I + N EA + F
Sbjct: 380 DIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSG 439
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCG 380
M + PN +T VLSA L +G I + N+E +V L + G
Sbjct: 440 MKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAG 499
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ +A + ++ ++V + +++S +G E A + ++ D
Sbjct: 500 RLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVID 544
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
SS++ ++ ++I +H +K S+ N L+ Y KCG+VV A ++F +
Sbjct: 82 SSLIQQCIGIKSITDITKIQSHALKRGFHH--SLGNKLIDAYLKCGSVVYARKVFDEVPH 139
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
R+IV++NSMI+ + +NG +EA++++++M +G++P++ TF SV A + +GLV EG
Sbjct: 140 RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEG 196
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/623 (30%), Positives = 333/623 (53%), Gaps = 47/623 (7%)
Query: 44 MITGFVRRGMFYEAEELYVNMP--ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKD 101
M++ + + G + E+ L+ M +S + ++ + +GR E RI + +
Sbjct: 524 MMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLG 583
Query: 102 VVAWGSMVDG----YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
++ ++V+ Y K G V A ++FD++ +++VV+W +M+ G + + F+
Sbjct: 584 FGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFV 643
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
M + + TL AC G +HG + F +++ N+++ MY + G
Sbjct: 644 QMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCG 703
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMIT 273
+++A + F M ++ VSW SLI+ YV G ++A RLF M K D S T+++
Sbjct: 704 NLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLH 763
Query: 274 G-----------------------------------FSSKGNLEKSIELFNMMPEKDDVT 298
++ G++E++ +F+ +P KD V+
Sbjct: 764 ACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVS 823
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W +I G+ N EA + F EM +K+ RP+ +T++ +L A + A L G IH ++
Sbjct: 824 WNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMACLLPACGSLAALEIGRGIHGCIL 882
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ S++ + N+L+ +Y KCG++V A +F I E++++++ MISG +GLG EA+
Sbjct: 883 RNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIA 942
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F+KM+ G+ P++ITF S+L AC+H GL+ EG+ +F SM + N+EP EHYACMVD+L
Sbjct: 943 TFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLL 1002
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
R G+L++A +LI +M +P +WGALL R H +++LA+ A+H+ ELEPD+A YV
Sbjct: 1003 ARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYV 1062
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
+L+++Y+ K + ++R + + ++KSPGCSWI ++ K F++ + K I
Sbjct: 1063 LLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFS 1122
Query: 599 TLQTIS-KGTKEFDWPKHDWSLL 620
L + K E PK ++L+
Sbjct: 1123 LLNNLRIKMKNEGHSPKMRYALI 1145
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/474 (30%), Positives = 236/474 (49%), Gaps = 51/474 (10%)
Query: 112 YCKKGRVIEAREIFDKMPEKN-VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y G + E R IFD + N V W M+ Y K+ + + LF M++ G+ NS T
Sbjct: 496 YVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYT 555
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMM 229
+ + + R E ++HG V + GF Y+ ++ NS+I Y + G +D A+K+F +
Sbjct: 556 FSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVV-NSLIATYFKSGEVDSAHKLFDEL 614
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWT---------------- 269
RD VSWNS+ISG V NG A F +M G D +
Sbjct: 615 GDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGR 674
Query: 270 -------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
T++ +S GNL +I+ F M +K V+WT++I+ +V
Sbjct: 675 ALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREG 734
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
Y++A R F EM K V P+ +++SVL A A +L++G +H ++ K NM + + N
Sbjct: 735 LYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSN 794
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+ +Y+KCG++ +AY +F+ I ++IVS+N+MI G+++N L EAL LF +M+ E P
Sbjct: 795 ALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESR-P 853
Query: 431 NQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYA-CMVDILGRAGSLAEAI 488
+ IT +L AC + +E G I+ ++ Y+ E H A ++D+ + GSL A
Sbjct: 854 DGITMACLLPACGSLAALEIGRGIHGCILRNGYSSEL---HVANALIDMYVKCGSLVHA- 909
Query: 489 DLINSMTFEPPPGVWGALL-GAGRTHL-NLDLAKLAAQHLMELEPDSATPYVVL 540
L+ M E W ++ G G L N +A + ++PD T +L
Sbjct: 910 RLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSIL 963
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 198/429 (46%), Gaps = 67/429 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM-PMRNAVSYAAMITGFVRRGMFYEAEE 59
+ DR S+N+MI+ + N S + A E F M +R V A ++
Sbjct: 614 LGDRDVVSWNSMISGCVMNGFS-HSALEFFVQMLILRVGVDLATLVNSV----------- 661
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
+ C+N G L +GR + +A ++V+ +++D Y K G +
Sbjct: 662 -----------AACANV---GSLSLGRALHGQGV-KACFSREVMFNNTLLDMYSKCGNLN 706
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+A + F+KM +K VV+WT+++ Y++ ++D LF M G++ + ++T + AC
Sbjct: 707 DAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACA 766
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
+G VH + + + + N+++ MY + G M+EA VFS + +D VSWN+
Sbjct: 767 CGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNT 826
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMIT------------------------GF 275
+I GY N EA +LF M + TM G+
Sbjct: 827 MIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGY 886
Query: 276 SSK--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
SS+ G+L + LF+M+PEKD +TWT +ISG + EA F +
Sbjct: 887 SSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQK 946
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQG-SQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M ++P+++T +S+L A + + LN+G ++ + + NME + +V L ++ G
Sbjct: 947 MRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTG 1006
Query: 381 NVVDAYRIF 389
N+ AY +
Sbjct: 1007 NLSKAYNLI 1015
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 192/413 (46%), Gaps = 53/413 (12%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS-MMSKR 232
+ + C +EG VH ++S G + +LG ++ MY G + E ++F ++S
Sbjct: 457 ILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDN 516
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMP---------------------GK-------- 263
WN ++S Y G+ E+ LF++M G+
Sbjct: 517 KVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIH 576
Query: 264 ------DFVSWTT----MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
F S+ T +I + G ++ + +LF+ + ++D V+W ++ISG V N
Sbjct: 577 GCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSH 636
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A +F++ML V + TL + ++A A +L+ G +H VK +V N+L+
Sbjct: 637 SALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLL 696
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+YSKCGN+ DA + F + ++ +VS+ S+I+ + + GL ++A+ LF +M+ +G+ P+
Sbjct: 697 DMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVY 756
Query: 434 TFLSVLSACNHVGLVEEG-----FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
+ SVL AC +++G +I +M + ++D+ + GS+ EA
Sbjct: 757 SMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNA------LMDMYAKCGSMEEAY 810
Query: 489 DLINSMTFEPPPGVWGALLGA-GRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
+ + + + W ++G + L + KL A+ E PD T +L
Sbjct: 811 LVFSQIPVKDIVS-WNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLL 862
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 316 FRWFIEMLRKDVRPNQLTL---SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
R +E+LR + ++L L SS+L A L +G +H+ + + + + L
Sbjct: 434 LRNAVELLRMS-QKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKL 492
Query: 373 VSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
V +Y CG + + RIF +I + + +N M+S +A+ G E++ LF+KM+ G+ N
Sbjct: 493 VFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGN 552
Query: 432 QITFLSVLSACNHVGLVEE-----GFIY---FKSMKTLYN 463
TF +L +G V E G +Y F S T+ N
Sbjct: 553 SYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVN 592
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 311/538 (57%), Gaps = 49/538 (9%)
Query: 48 FVRRGMFYEAEELYVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAM----VEKDV 102
+ + G A +L+ MP R +V N +ISGY K G EEA+ +F M + ++V
Sbjct: 129 YAKYGPIEFARKLFDEMPDR---TVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNV 185
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RR 161
+ W +M+ G+ KKG + AR FDKMPE++VV+W AM+ GY + E+ LF M
Sbjct: 186 ITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSP 245
Query: 162 GGMAFNSITLTILFEACGRFFR--YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
G + + T + +C E + V L + GF + + +++ M+ + G +
Sbjct: 246 GNVQPDETTWATVISSCSSLGDPCLSESI-VRKLDDKVGFRPNYFVKTALLDMHAKCGNL 304
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG 279
+ A+K+F + Y+ +P W MI+ ++ G
Sbjct: 305 EAAHKIFEQLG----------------------VYKYRSSVP------WNAMISAYARVG 336
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD--VRPNQLTLSSV 337
+L + LF+ MP++D V+W ++I+G+ N + +A + F EM+ + +P+++T+ SV
Sbjct: 337 DLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSV 396
Query: 338 LSASAATATLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
SA L G+ ++K+N ++ +S+ NSL+++YS+CG++ DA IF + R+
Sbjct: 397 FSACGHLGELGLGNWA-VSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRD 455
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+VSYN++ISGFA++G G E++ L KMK++G+ P++IT++++L+AC+H GL++EG F+
Sbjct: 456 LVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFE 515
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
S+K P +HYACM+D+LGRAG L EA+ LI SM EP G++G+LL A H +
Sbjct: 516 SIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQV 570
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+L +LAA L ++EP ++ Y +LS++Y+ G+ ++G++VR + + ++K+ G SW+
Sbjct: 571 ELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWL 628
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 204/416 (49%), Gaps = 50/416 (12%)
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF-DLFLSM-RRGGMAFNSITLTILFEACGR 180
IF +V +T M+ Y ++ F LF M + + N+ +++ ++ G
Sbjct: 42 HIFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGS 101
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
E + V + G+D D + N I+ +Y + G ++ A K+F M R WN +
Sbjct: 102 -----ESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVM 156
Query: 241 ISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
ISGY G EEA LF M ++ ++WTTMITG + KGNL+ + F+ MPE+
Sbjct: 157 ISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSV 216
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V+W A++SG+ EE R F +ML +V+P++ T ++V+S+ ++ I
Sbjct: 217 VSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVR 276
Query: 356 HV-VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI---------------------- 392
+ K+ + ++ +L+ +++KCGN+ A++IF +
Sbjct: 277 KLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVG 336
Query: 393 ------------DERNIVSYNSMISGFAQNGLGEEALNLFRKM--KDEGLVPNQITFLSV 438
+R+ VS+NSMI+G+ QNG +A+ LF +M ++ P+++T +SV
Sbjct: 337 DLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSV 396
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
SAC H+G + G + S+ + +I+ Y ++++ R GS+ +A+ + M
Sbjct: 397 FSACGHLGELGLGN-WAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEM 451
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/550 (23%), Positives = 219/550 (39%), Gaps = 136/550 (24%)
Query: 1 MADRTSASYNAMITAL--INNNCSIYEAFEIFATMPM-RNAVSYAAMITGFVRRGMFYEA 57
M DRT A +N MI+ N F + + RN +++ MITG ++G A
Sbjct: 145 MPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTA 204
Query: 58 EELYVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDG 111
+ MP R SV S NA++SGY + G EE R+F M V+ D W +++
Sbjct: 205 RMYFDKMPER---SVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISS 261
Query: 112 YCKKGRVIEAREIFDKMPEK-----NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
G + I K+ +K N TA++D + K E
Sbjct: 262 CSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHK------------ 309
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+FE G ++YR V N++I+ Y R+G + A +F
Sbjct: 310 -------IFEQLG-VYKYRSSVP----------------WNAMISAYARVGDLPSAKHLF 345
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD---------FVS---------- 267
M +RD VSWNS+I+GY NGE +A +LFE M + VS
Sbjct: 346 DKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGE 405
Query: 268 ----------------------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
+ ++I +S G+++ ++ +F M +D V++ +ISG
Sbjct: 406 LGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISG 465
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
F + E+ +M + P+++T ++L+A + L++G
Sbjct: 466 FAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQ-------------- 511
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
R+F +I ++ Y MI + G EEA+ L + M
Sbjct: 512 ---------------------RLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMPM 550
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAGSL 484
E P+ + S+L+A + VE G + + L+ +EP +YA + +I AG
Sbjct: 551 E---PHAGIYGSLLNATSIHKQVELGEL---AAAKLFKVEPHNSGNYALLSNIYASAGRW 604
Query: 485 AEAIDLINSM 494
E + ++M
Sbjct: 605 KEGDKVRDTM 614
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 319 FIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F ML+ D++PN + SV+ SA + ++ AHV+K + D ++N ++ +Y+
Sbjct: 76 FKHMLQHCDIKPNA-SFYSVMMKSAGSESM----LFLAHVLKSGYDRDHYVRNGILGIYA 130
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
K G + A ++F + +R + +N MISG+ + G EEA LF M D+ + N IT+ +
Sbjct: 131 KYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTT 190
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM--- 494
+++ G ++ +YF M E + M+ + G+ E I L N M
Sbjct: 191 MITGHAKKGNLKTARMYFDKMP-----ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSP 245
Query: 495 -TFEPPPGVWGALLGA 509
+P W ++ +
Sbjct: 246 GNVQPDETTWATVISS 261
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 311/538 (57%), Gaps = 49/538 (9%)
Query: 48 FVRRGMFYEAEELYVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAM----VEKDV 102
+ + G A +L+ MP R +V N +ISGY K G EEA+ +F M + ++V
Sbjct: 72 YAKYGPIEFARKLFDEMPDR---TVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNV 128
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RR 161
+ W +M+ G+ KKG + AR FDKMPE++VV+W AM+ GY + E+ LF M
Sbjct: 129 ITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSP 188
Query: 162 GGMAFNSITLTILFEACGRFFR--YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
G + + T + +C E + V L + GF + + +++ M+ + G +
Sbjct: 189 GNVQPDETTWATVISSCSSLGDPCLSESI-VRKLDDKVGFRPNYFVKTALLDMHAKCGNL 247
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG 279
+ A+K+F + Y+ +P W MI+ ++ G
Sbjct: 248 EAAHKIFEQLG----------------------VYKYRSSVP------WNAMISAYARVG 279
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD--VRPNQLTLSSV 337
+L + LF+ MP++D V+W ++I+G+ N + +A + F EM+ + +P+++T+ SV
Sbjct: 280 DLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSV 339
Query: 338 LSASAATATLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
SA L G+ ++K+N ++ +S+ NSL+++YS+CG++ DA IF + R+
Sbjct: 340 FSACGHLGELGLGNWA-VSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRD 398
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+VSYN++ISGFA++G G E++ L KMK++G+ P++IT++++L+AC+H GL++EG F+
Sbjct: 399 LVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFE 458
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
S+K P +HYACM+D+LGRAG L EA+ LI SM EP G++G+LL A H +
Sbjct: 459 SIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQV 513
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+L +LAA L ++EP ++ Y +LS++Y+ G+ ++G++VR + + ++K+ G SW+
Sbjct: 514 ELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWL 571
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 177/344 (51%), Gaps = 43/344 (12%)
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V + G+D D + N I+ +Y + G ++ A K+F M R WN +ISGY G EEA
Sbjct: 53 VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA 112
Query: 254 YRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
LF M ++ ++WTTMITG + KGNL+ + F+ MPE+ V+W A++SG+
Sbjct: 113 STLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQG 172
Query: 310 EQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHV-VKMNMESDVS 367
EE R F +ML +V+P++ T ++V+S+ ++ I + K+ +
Sbjct: 173 GAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYF 232
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNI----------------------------------D 393
++ +L+ +++KCGN+ A++IF +
Sbjct: 233 VKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMP 292
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKM--KDEGLVPNQITFLSVLSACNHVGLVEEG 451
+R+ VS+NSMI+G+ QNG +A+ LF +M ++ P+++T +SV SAC H+G + G
Sbjct: 293 QRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLG 352
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+ S+ + +I+ Y ++++ R GS+ +A+ + M
Sbjct: 353 N-WAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMA 395
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/550 (23%), Positives = 219/550 (39%), Gaps = 136/550 (24%)
Query: 1 MADRTSASYNAMITAL--INNNCSIYEAFEIFATMPM-RNAVSYAAMITGFVRRGMFYEA 57
M DRT A +N MI+ N F + + RN +++ MITG ++G A
Sbjct: 88 MPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTA 147
Query: 58 EELYVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDG 111
+ MP R SV S NA++SGY + G EE R+F M V+ D W +++
Sbjct: 148 RMYFDKMPER---SVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISS 204
Query: 112 YCKKGRVIEAREIFDKMPEK-----NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
G + I K+ +K N TA++D + K E
Sbjct: 205 CSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHK------------ 252
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+FE G ++YR V N++I+ Y R+G + A +F
Sbjct: 253 -------IFEQLG-VYKYRSSVP----------------WNAMISAYARVGDLPSAKHLF 288
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD---------FVS---------- 267
M +RD VSWNS+I+GY NGE +A +LFE M + VS
Sbjct: 289 DKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGE 348
Query: 268 ----------------------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
+ ++I +S G+++ ++ +F M +D V++ +ISG
Sbjct: 349 LGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISG 408
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
F + E+ +M + P+++T ++L+A + L++G
Sbjct: 409 FAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQ-------------- 454
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
R+F +I ++ Y MI + G EEA+ L + M
Sbjct: 455 ---------------------RLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMPM 493
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAGSL 484
E P+ + S+L+A + VE G + + L+ +EP +YA + +I AG
Sbjct: 494 E---PHAGIYGSLLNATSIHKQVELGEL---AAAKLFKVEPHNSGNYALLSNIYASAGRW 547
Query: 485 AEAIDLINSM 494
E + ++M
Sbjct: 548 KEGDKVRDTM 557
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 319 FIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F ML+ D++PN + SV+ SA + ++ AHV+K + D ++N ++ +Y+
Sbjct: 19 FKHMLQHCDIKPNA-SFYSVMMKSAGSESM----LFLAHVLKSGYDRDHYVRNGILGIYA 73
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
K G + A ++F + +R + +N MISG+ + G EEA LF M D+ + N IT+ +
Sbjct: 74 KYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTT 133
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM--- 494
+++ G ++ +YF M E + M+ + G+ E I L N M
Sbjct: 134 MITGHAKKGNLKTARMYFDKMP-----ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSP 188
Query: 495 -TFEPPPGVWGALLGA 509
+P W ++ +
Sbjct: 189 GNVQPDETTWATVISS 204
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 282/488 (57%), Gaps = 10/488 (2%)
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
R+ A +M + NV + A++ G++ + ++ M R ++ +S T + L +
Sbjct: 827 RLDLAVSFMTQMQKPNVFVYNALIKGFVTCSHPIRSLEFYVRMLRDSVSPSSYTYSSLVQ 886
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
A + E +Q H + +FGF + + + ++I Y G + EA KVF M +RD V+
Sbjct: 887 ASAFASGFGESLQAH--IWKFGFGFHVQIQTTLIGFYSASGRIREARKVFDEMPERDDVT 944
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
W +++S Y +++ A L +MP K+ +W +I G++ GNLE + LFN MP KD
Sbjct: 945 WTTMVSAYRQVLDMDSANSLANQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDI 1004
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
++WT +I+G+ N++Y EA F +M+ + + P+++T+S+V+SA A L G ++H +
Sbjct: 1005 ISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMY 1064
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
V+ DV I ++LV +YSKCG++ A +F N+ ++N+ +NS+I G A +G +EA
Sbjct: 1065 TVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEA 1124
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L +F KM+ E + PN +TF+SV +AC H GLVEEG ++SM Y+I EHY CMV
Sbjct: 1125 LKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVH 1184
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+ +AG + EA++LI SM FEP +WGALL R H NL++A++A LM LEP ++
Sbjct: 1185 LFSKAGLIYEALELIGSMEFEPNAVIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNSGY 1244
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRK-SPGCSWIILKDKVHLFLAGRKS------ 589
Y +L +Y+ + RD +R + + I K PG S I + + HLF A KS
Sbjct: 1245 YFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDE 1304
Query: 590 -CLDLKEI 596
CL L EI
Sbjct: 1305 VCLLLDEI 1312
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 130/254 (51%), Gaps = 6/254 (2%)
Query: 42 AAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKD 101
+I + G EA +++ MP R D V ++S Y +V + A + M EK+
Sbjct: 915 TTLIGFYSASGRIREARKVFDEMPER--DDVTWTTMVSAYRQVLDMDSANSLANQMPEKN 972
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
W ++DGY + G + A +F++MP K++++WT M++GY + + + +F M
Sbjct: 973 EATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMME 1032
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
G+ + +T++ + AC G +VH + GF D+ +G++++ MY + G ++
Sbjct: 1033 EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLER 1092
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSS 277
A VF + K++ WNS+I G +G +EA ++F +M + V++ ++ T +
Sbjct: 1093 ALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTH 1152
Query: 278 KGNLEKSIELFNMM 291
G +E+ ++ M
Sbjct: 1153 AGLVEEGRRIYRSM 1166
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 144/325 (44%), Gaps = 85/325 (26%)
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
L N IT +D A + M K + +N+LI G+V + + RM +D
Sbjct: 814 LMNQFITACSSFNRLDLAVSFMTQMQKPNVFVYNALIKGFVTCSHPIRSLEFYVRML-RD 872
Query: 265 FVS---------------------------W-----------TTMITGFSSKGNLEKSIE 286
VS W TT+I +S+ G + ++ +
Sbjct: 873 SVSPSSYTYSSLVQASAFASGFGESLQAHIWKFGFGFHVQIQTTLIGFYSASGRIREARK 932
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+F+ MPE+DDVTWT ++S A+R ++M + NQ+
Sbjct: 933 VFDEMPERDDVTWTTMVS----------AYRQVLDMDSANSLANQMP------------- 969
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
E + + N L+ Y++ GN+ A +F + ++I+S+ +MI+G
Sbjct: 970 ----------------EKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMING 1013
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---FIYFKSMKTLYN 463
+++N EA+ +F KM +EG++P+++T +V+SAC H+G++E G +Y + +
Sbjct: 1014 YSRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLD 1073
Query: 464 IEPGPEHYACMVDILGRAGSLAEAI 488
+ G + +VD+ + GSL A+
Sbjct: 1074 VYIG----SALVDMYSKCGSLERAL 1094
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 25 EAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN----- 75
EA ++FA M M N V++ ++ T G+ E +Y +M + S+ SN
Sbjct: 1123 EALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDY--SIVSNVEHYG 1180
Query: 76 ALISGYLKVGRCEEAARIFEAM-VEKDVVAWGSMVDGYCKKGRVIEAREI-FDKM 128
++ + K G EA + +M E + V WG+++DG C+ + +E EI F+K+
Sbjct: 1181 CMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDG-CRIHKNLEIAEIAFNKL 1234
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/595 (31%), Positives = 310/595 (52%), Gaps = 61/595 (10%)
Query: 20 NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRG-----------MFYEAEELYVNM---P 65
NCS A +F TMP+RN S+ A++ ++ G + YE + ++ P
Sbjct: 96 NCSFENACHVFDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFP 155
Query: 66 ARWRDSVCSNALISG------YLKV-GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
+ A+ G LK G + A +F K ++ +M+ GY + G +
Sbjct: 156 VVLKICCGLCAVELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNL 215
Query: 119 IEAREIFDKMPEKNV----VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
+A+E+FD+M ++ V ++W +M+ GY+ F++ + LF + + G+ +S TL +
Sbjct: 216 FKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSV 275
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
C R G + H L G + I+G +++ MY + + A F +S+RD
Sbjct: 276 LAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERD- 334
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP-- 292
+P +W +I+G++ EK EL M
Sbjct: 335 -------------------------LP-----TWNALISGYARCNQAEKIRELHQKMRRD 364
Query: 293 --EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
E + TW II+G+V N+QY+ A + F EM ++RP+ T+ +L+A + AT+ +G
Sbjct: 365 GFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRG 424
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q+HA+ ++ +SDV I +LV +Y+KCG+V YR++ I N+VS+N+M++ +A +
Sbjct: 425 KQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMH 484
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
G GEE + LFR+M + P+ +TFL+VLS+C H G +E G M YN+ P +H
Sbjct: 485 GHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALM-VAYNVMPSLKH 543
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE 530
Y CMVD+L RAG L EA +LI ++ E W ALLG H +DL ++AA+ L+ELE
Sbjct: 544 YTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELE 603
Query: 531 PDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
P++ YV+L++LY+ GK + R K ++K PGCSWI +D +H+F+A
Sbjct: 604 PNNPGNYVMLANLYASAGKWHYLTQTRQLMKDMGMQKRPGCSWIEDRDGIHVFVA 658
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 155/333 (46%), Gaps = 61/333 (18%)
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+S T + ++CG G Q+H + GF+ + ++ MY R + A VF
Sbjct: 50 SSTTYASILDSCGSPIL---GKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVF 106
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEE---------------------------------A 253
M R+ SW +L+ Y+ G EE A
Sbjct: 107 DTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCA 166
Query: 254 YRLFERMPG------KDFVSWTTMITGFSSK---------------GNLEKSIELFNMMP 292
L +M G D S M + FS K GNL K+ ELF+ M
Sbjct: 167 VELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRME 226
Query: 293 ----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+KD ++W ++ISG+V+ ++EA+ F ++L++ + P+ TL SVL+ A A++
Sbjct: 227 QEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIR 286
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+G + H+ + ++S+ + +LV +YSKC ++V A F + ER++ ++N++ISG+A
Sbjct: 287 RGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYA 346
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ E+ L +KM+ +G PN T+ +++
Sbjct: 347 RCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAG 379
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 108/223 (48%), Gaps = 20/223 (8%)
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
G+ A+ + +FV+ T ++ ++ + E + +F+ MP ++ +WTA++ ++
Sbjct: 67 GKQLHAHSIKSGFNAHEFVT-TKLLQMYARNCSFENACHVFDTMPLRNLHSWTALLRVYI 125
Query: 308 NNEQYEEAFRWFIEMLRKDVRP--NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+EEAF F ++L + VR + VL + G Q+H +K + +
Sbjct: 126 EMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHDGDMK 185
Query: 366 VSIQ-------------NSLVSLYSKCGNVVDAYRIFTNIDERNI----VSYNSMISGFA 408
+ + N++++ Y + GN+ A +F +++ + +S+NSMISG+
Sbjct: 186 SAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYV 245
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
L +EA +LFR + EG+ P+ T SVL+ C + + G
Sbjct: 246 DGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRG 288
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/631 (30%), Positives = 329/631 (52%), Gaps = 53/631 (8%)
Query: 45 ITGFVRRGMFYEAEELYVNM-----PARWRDSVCSNALISGYLKVGRCEEAARIFEAMV- 98
++ +++ G +EA + + +M P DS+ ++S + E +I A+V
Sbjct: 269 LSSYLQAGEGWEAVDCFRDMIKSRVPC---DSLTYIVILSVVASLNHLELGKQIHGAVVR 325
Query: 99 ---EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
++ V S ++ Y K G V AR +F +M E ++++W ++ G + E L
Sbjct: 326 FGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRL 385
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFR-YREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
F+ + R G+ + T+T + AC Y G QVH + G D + ++I +Y
Sbjct: 386 FIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYS 445
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF----ERMPGKDFVSWTT 270
+ G M+EA +F D SWN+++ G+ + EA RLF ER D +++
Sbjct: 446 KGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFAN 505
Query: 271 -------------------------------MITG----FSSKGNLEKSIELFNMMPEKD 295
+I+G + G ++ + ++FN +P D
Sbjct: 506 AAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPD 565
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
DV WT +ISG V N + E+A + +M V+P++ T ++++ A + L QG QIHA
Sbjct: 566 DVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHA 625
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
+++K+N D + SLV +Y+KCGN+ DAY +F ++ R++ +N+MI G AQ+G EE
Sbjct: 626 NIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEE 685
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
ALN F +MK G+ P+++TF+ VLSAC+H GL + + F SM+ Y +EP EHY+C+V
Sbjct: 686 ALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLV 745
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D L RAG + EA +++SM FE ++ LL A R + + + A+ L ++P +
Sbjct: 746 DALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSA 805
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
YV+LS++Y+ + + R K ++K PG SWI +K+KVHLF+AG +S +
Sbjct: 806 AYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDL 865
Query: 596 IEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
I ++ + K KE + P +++L+ +E +
Sbjct: 866 IYNKVEYVMKRIKEEGYVPDTEFALVDIEEE 896
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 156/632 (24%), Positives = 276/632 (43%), Gaps = 105/632 (16%)
Query: 2 ADRTSASYNAMITAL-----INNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFY- 55
+DR +YNA++ A +++ +EAF IF + ++ ++ + + Y
Sbjct: 77 SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 56 -----EAEELY-VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMV 109
EA + Y V + +W D + AL++ Y K R EA +F+ M +DVV W M+
Sbjct: 137 SPSASEALQGYAVKIGLQW-DVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
Query: 110 DGYCKKGRVIEA----------------------------REIFDKMPEK---------- 131
Y + G E + +F++ E+
Sbjct: 196 KAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFV 255
Query: 132 -----NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+V W + Y++ + D F M + + +S+T ++
Sbjct: 256 CDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLEL 315
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G Q+HG V RFG+D + + NS I MY + G ++ A ++F M + D +SWN++ISG
Sbjct: 316 GKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCAR 375
Query: 247 NGEIEEAYRLF------ERMPGK-----------------------------------DF 265
+G E + RLF +P + F
Sbjct: 376 SGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSF 435
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
VS T +I +S G +E++ LF+ D +W A++ GF ++ Y EA R F M +
Sbjct: 436 VS-TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHER 494
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ +Q+T ++ A+ L QG QIHA V+KM D+ + + ++ +Y KCG + A
Sbjct: 495 GEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSA 554
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F I + V++ ++ISG +NG E+AL + +M+ G+ P++ TF +++ AC+ +
Sbjct: 555 RKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLL 614
Query: 446 GLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
+E+G I+ MK N P +VD+ + G++ +A L M +W
Sbjct: 615 TALEQGKQIHANIMK--LNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWN 671
Query: 505 ALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
A++ H N A+ A E++ TP
Sbjct: 672 AMIVGLAQHGN---AEEALNFFNEMKSRGVTP 700
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 208/440 (47%), Gaps = 27/440 (6%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
S+ +A+ L +G+ A I + + D +++ Y K G + AR++FD P+
Sbjct: 18 SILRHAIADSDLILGKRTHAV-IVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQ 76
Query: 131 --KNVVAWTAMVDGYMK------VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+++V + A++ Y V+ + F +F +R+ M TL+ LF+ C +
Sbjct: 77 SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+ G + G +D+ + +++ +Y + + EA +F M RD V WN ++
Sbjct: 137 SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196
Query: 243 GYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIE--------LFNM 290
YV G +E LF D VS T++ G K E+ +E LF
Sbjct: 197 AYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVC 256
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+ D W +S ++ + EA F +M++ V + LT +LS A+ L G
Sbjct: 257 DDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELG 316
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
QIH VV+ + VS+ NS +++Y K G+V A R+F + E +++S+N++ISG A++
Sbjct: 317 KQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARS 376
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL---YNIEPG 467
GL E +L LF + GL+P+Q T SVL AC+ +EE + + + T I
Sbjct: 377 GLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCALKAGIVLD 433
Query: 468 PEHYACMVDILGRAGSLAEA 487
++D+ + G + EA
Sbjct: 434 SFVSTALIDVYSKGGKMEEA 453
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 202/453 (44%), Gaps = 54/453 (11%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDS---- 71
S+ A +F M + +S+ +I+G R G+ + L++++ P ++ +
Sbjct: 347 SVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLR 406
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
CS +L Y VGR + +V V+ +++D Y K G++ EA +F
Sbjct: 407 ACS-SLEESYC-VGRQVHTCALKAGIVLDSFVS-TALIDVYSKGGKMEEAELLFHNQDGF 463
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
++ +W AM+ G+ D + + LF M G + IT +A G R ++G Q+H
Sbjct: 464 DLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIH 523
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+V + F YD+ + + I+ MY + G M A KVF+ + D V+W ++ISG V NGE E
Sbjct: 524 AVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEE 583
Query: 252 EAYRLFERM--------------------------PGK-------------DFVSWTTMI 272
+A + +M GK D T+++
Sbjct: 584 QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLV 643
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++ GN+E + LF M + W A+I G + EEA +F EM + V P+++
Sbjct: 644 DMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRV 703
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T VLSA + + + + + K +E ++ + LV S+ G++ +A ++ ++
Sbjct: 704 TFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSS 763
Query: 392 ID-ERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ E + Y ++++ G E + K+
Sbjct: 764 MPFEASATMYRTLLNACRVQGDKETGERVAEKL 796
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/610 (30%), Positives = 319/610 (52%), Gaps = 51/610 (8%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVNMPARWRDSVCSNALISGY 81
+F +P ++ V++ MI+G V+ G +FY+ E V +V S I +
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPF 264
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L+ G+ + A I +E D ++D Y K GRVI A ++F+ MP KN+++WT ++
Sbjct: 265 LEGGK-QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY + ++ +LF SM + G+ + + + +C G QVH +
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG---EIEEAYRLFE 258
D + NS+I MY + + +A KVF + + D V +N++I GY G E+ EA +F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 259 RMPGK---------------------------------------DFVSWTTMITGFSSKG 279
M + D + + +I +S+
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
L+ S +F+ M KD V W ++ +G+V + EEA F+E+ RP++ T +++++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A+ A++ G + H ++K +E + I N+L+ +Y+KCG+ DA++ F + R++V
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+NS+IS +A +G G++AL + KM EG+ PN ITF+ VLSAC+H GLVE+G F+ M
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
+ IEP EHY CMV +LGRAG L +A +LI M +P VW +LL N++LA
Sbjct: 684 R-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
+ AA+ + +P + + +LS++Y+ G + +VR + K++ + K PG SWI + +
Sbjct: 743 EHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKE 802
Query: 580 VHLFLAGRKS 589
VH+FL+ KS
Sbjct: 803 VHIFLSKDKS 812
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/514 (25%), Positives = 247/514 (48%), Gaps = 54/514 (10%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV- 84
A ++F MP RN VS++ M++ G++ E+ +++ +DS + ++S +++
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP-NEYILSSFIQAC 156
Query: 85 ------GR---CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
GR + + + ++ ++DV ++D Y K G + AR +FD +PEK+ V
Sbjct: 157 SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVT 216
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT M+ G +K+ LF + + + L+ + AC G Q+H +
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R+G + D L N +I Y + G + A+K+F+ M ++ +SW +L+SGY N +EA
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 256 LFERMP----GKDFVSWTTMIT--------GFSSK----------GN------------- 280
LF M D + ++++T GF ++ GN
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 281 ----LEKSIELFNMMPEKDDVTWTAIISGFVN-NEQYE--EAFRWFIEMLRKDVRPNQLT 333
L + ++F++ D V + A+I G+ Q+E EA F +M + +RP+ LT
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
S+L ASA+ +L QIH + K + D+ ++L+ +YS C + D+ +F +
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+++V +NSM +G+ Q EEALNLF +++ P++ TF ++++A ++ V+ G
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG-Q 575
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
F +E P ++D+ + GS +A
Sbjct: 576 EFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 200/406 (49%), Gaps = 62/406 (15%)
Query: 94 FEAMVEKDVVAWGSMVDGY---------CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
++ +V ++ WG +D Y + G ++ AR++F+KMPE+N+V+W+ MV
Sbjct: 62 YQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACN 121
Query: 145 KVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEAC------GRFFRYREGVQVHGLVSRF 197
+E+ +FL R + N L+ +AC GR+ + Q+ + +
Sbjct: 122 HHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF----QLQSFLVKS 177
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
GFD D+ +G +I Y + G +D A VF + ++ V+W ++ISG V G + +LF
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 258 ERMPGKDFVS---------------------------------------WTTMITGFSSK 278
++ + V +I +
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G + + +LFN MP K+ ++WT ++SG+ N ++EA F M + ++P+ SS+L
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
++ A+ L G+Q+HA+ +K N+ +D + NSL+ +Y+KC + DA ++F ++V
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417
Query: 399 SYNSMISGFAQNGLG---EEALNLFRKMKDEGLVPNQITFLSVLSA 441
+N+MI G+++ G EALN+FR M+ + P+ +TF+S+L A
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 153/295 (51%), Gaps = 42/295 (14%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG + +G + D L N +I +Y R G M A KVF M +R+ VSW++++S H+G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 250 IEEAYRLF-------ERMPGKDFVS--------------W-------------------- 268
EE+ +F + P + +S W
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 269 -TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T +I + GN++ + +F+ +PEK VTWT +ISG V + + + F +++ +V
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ LS+VLSA + L G QIHAH+++ +E D S+ N L+ Y KCG V+ A++
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+F + +NI+S+ +++SG+ QN L +EA+ LF M GL P+ S+L++C
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM--LRKDVR 328
+I +S G + + ++F MPE++ V+W+ ++S ++ YEE+ F+E RKD
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD-S 143
Query: 329 PNQLTLSSVLSASAATATLNQGS--QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
PN+ LSS + A + + Q+ + +VK + DV + L+ Y K GN+ A
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+F + E++ V++ +MISG + G +L LF ++ ++ +VP+ +VLSAC+ +
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 447 LVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+E G I+ ++ Y +E ++D + G + A L N M
Sbjct: 264 FLEGGKQIHAHILR--YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGM 310
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ +L A+ L+ + +H ++ +E D + N L++LYS+ G +V A ++F +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLF----RKMKDEGLVPNQITFLSVLSACN 443
ERN+VS+++M+S +G+ EE+L +F R KD PN+ S + AC+
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS---PNEYILSSFIQACS 157
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 270/484 (55%), Gaps = 35/484 (7%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F ++ N WTAM+ GY + + + MRR G+ S T + LF+ACG
Sbjct: 98 VFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALN 157
Query: 184 YREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G QVH G F D+ +GNS+I +Y + GF+ A
Sbjct: 158 MDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCAR------------------- 198
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
++F+ M +D VSWT +I ++ G++E + LF+ +P KD V WTA+
Sbjct: 199 ------------KVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAM 246
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH--AHVVKM 360
++G+ N + +EA +F +M + +++TL+ V+SA A + + I A
Sbjct: 247 VTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGF 306
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+V + ++L+ +YSKCG+ +AY++F + ERN+ SY+SMI G+A +G AL LF
Sbjct: 307 GPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLF 366
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
M + PN++TF+ +LSAC+H GLVE+G F M+ + + P P+HYACMVD+LGR
Sbjct: 367 HDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGR 426
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA+DL+ +M EP GVWGALLGA R H N D+A++AA L +LEP+ Y++L
Sbjct: 427 AGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILL 486
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD-KVHLFLAGRKSCLDLKEIEVT 599
S++Y+ G+ + +++R + K +K+PGCSW K+ ++H F AG + EI
Sbjct: 487 SNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQA 546
Query: 600 LQTI 603
L+ +
Sbjct: 547 LKQL 550
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 125/230 (54%), Gaps = 10/230 (4%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N++I Y+K G A ++F+ M E+DVV+W ++ Y K G + A +FD +P
Sbjct: 177 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 236
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
K++VAWTAMV GY + ++ + F M+ GM + +TL + AC + +
Sbjct: 237 LKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 296
Query: 190 VHGLVSRFGF--DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+ + R GF ++++G+++I MY + G DEA KVF +M +R+ S++S+I GY +
Sbjct: 297 IRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMH 356
Query: 248 GEIEEAYRLFERM------PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
G A +LF M P K V++ +++ S G +E+ +LF M
Sbjct: 357 GRAHSALQLFHDMLKTEIRPNK--VTFIGILSACSHAGLVEQGRQLFAKM 404
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR--IFTNIDERNIVSYNSMI 404
+Q Q+HAH+++ + + L+ + +K + +Y +F ++ N + +MI
Sbjct: 55 FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMI 114
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
G+A GL E+ N + +M+ +G+ P TF ++ AC
Sbjct: 115 RGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKAC 152
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-PARWR-DSVCSNALISGYL 82
EA+++F M RN SY++MI G+ G + A +L+ +M R + V ++S
Sbjct: 330 EAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACS 389
Query: 83 KVGRCEEAARIFEAMVEKDVVA-----WGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAW 136
G E+ ++F M + VA + MVD + G + EA ++ MP E N W
Sbjct: 390 HAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVW 449
Query: 137 TAMVDG---YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
A++ + D + + + G+ N I L+ ++ + GR+
Sbjct: 450 GALLGACRIHGNPDIAQIAANELFKLEPNGIG-NYILLSNIYASAGRW 496
>gi|218197545|gb|EEC79972.1| hypothetical protein OsI_21597 [Oryza sativa Indica Group]
Length = 731
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/593 (31%), Positives = 299/593 (50%), Gaps = 93/593 (15%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NALISG + R +A + F+ M ++VV+W +M+ G+ V A ++F MP KN V
Sbjct: 139 NALISGLVMNHRVGDARKAFDRMPVRNVVSWTAMIKGHFTVHEVDMAFQLFKLMPVKNSV 198
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W M+ G++ + F + +LF S+ G ++ L + A R G +HGL
Sbjct: 199 SWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILVKIVNAFAGMKSIRGGRCIHGLA 258
Query: 195 SRFGFDYDIILGNSIITMY--------GRLGF-----------------------MDEAN 223
+ GF YD++L S++ MY RL F +DEA
Sbjct: 259 VKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDEAR 318
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------------- 260
K+F M+ RD +SWNS+I+GY+++G I +A L+ +M
Sbjct: 319 KLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMTEKSLEAATALMSWFIDNGMLDK 378
Query: 261 --------PGKDFVSWTTMITGFSSKGNLEKSIELFNMM--------------------- 291
P D +S TT++ G+ G+++ +++LF+MM
Sbjct: 379 ARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDALDLFHMMQKRTVVTYNVMISGLFHQGKI 438
Query: 292 ----------PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
P +D VTW+ +++G N EA +++ +ML ++RP++ +SS++S
Sbjct: 439 TEAYKLFNESPTRDSVTWSCLVAGLATNGLIHEALQFYKKMLLSNIRPSESVVSSLISCL 498
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ + + G Q HA +K+ ++S + IQNSL+SLY KCG ++ A IF + +R+ V++N
Sbjct: 499 SNYSMMVHGQQFHATTIKIGLDSHLLIQNSLISLYCKCGEMIIAQSIFDLMAKRDKVTWN 558
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
++I G+A N LG+ A+ +F M + P+ ITFL VLSACNH+ L+EE +F +M
Sbjct: 559 TIIHGYALNNLGQNAVEMFESMTKAQVDPDDITFLGVLSACNHMSLLEEAKYFFNAMTCT 618
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I P HYACMVD+ R + EA L+ SM FEP +W +LL R N LA+
Sbjct: 619 YGILPNIMHYACMVDLFCRKCMIKEAEGLVKSMPFEPDSAIWTSLLSGCRLTGNDKLAEH 678
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
AA L+ ++P + PY+ L ++ + K + +R + K K G SWI
Sbjct: 679 AASQLIAIDPCTKMPYLHLISVHGLTNKSTVIDSLRSQIKSTATEKDVGYSWI 731
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 188/416 (45%), Gaps = 76/416 (18%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
+ + GR+ ARE+FD MP ++VV+W ++ + FL MRR G + +
Sbjct: 45 HLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGFRPDHTSF 104
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ AC R E ++ +G+ + +V +
Sbjct: 105 STALSACARL----EALE---------------MGSCL-------------EQVLDGVES 132
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
+ WN+LISG V N + +A + F+RMP ++ VSWT MI G + ++ + +LF +M
Sbjct: 133 PNVALWNALISGLVMNHRVGDARKAFDRMPVRNVVSWTAMIKGHFTVHEVDMAFQLFKLM 192
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
P K+ V+W +I GFV +E++ EA F ++ + L +++A A ++ G
Sbjct: 193 PVKNSVSWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILVKIVNAFAGMKSIRGGR 252
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSK--------------------------CG----- 380
IH VK D+ ++ SLV +Y K CG
Sbjct: 253 CIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSD 312
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+ +A ++F +++ R+ +S+NSMI+G+ +G +A L+ KM ++ L +++S
Sbjct: 313 KIDEARKLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMTEKSLEAAT----ALMS 368
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG--RAGSLAEAIDLINSM 494
G+++ K+ YN+ P + +C + G + G + +A+DL + M
Sbjct: 369 WFIDNGMLD------KARDMFYNM-PQIDVMSCTTLLFGYVKGGHMDDALDLFHMM 417
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 332/629 (52%), Gaps = 54/629 (8%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
+++I N C I++A +F MP ++ V + M+ G+V+ G + A +++ M
Sbjct: 186 SSLIKFYSENGC-IHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTET 244
Query: 70 D----------SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
+ SVC++ ++ + + + + +E D +++ Y K G +
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGS----QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLF 300
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+AR +FD MP+ ++V W M+ GY++ ++ LF M M +SIT +
Sbjct: 301 DARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLS 360
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
R+G ++H + R G D+ L +++I +Y + ++ A K+F + D V +
Sbjct: 361 EGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTA 420
Query: 240 LISGYVHNGEIEEAYRLF-----ERM---------------------------------- 260
+ISGYV NG A +F ERM
Sbjct: 421 MISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG 480
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
G + ++ ++ G L+ + + F + +KD V W ++I+ N + EEA F
Sbjct: 481 HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFR 540
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+M + + +++S+ LSA A L+ G +IHA +++ SD+ +++L+ +YSKCG
Sbjct: 541 QMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCG 600
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
N+ A R+F ++E+N VS+NS+I+ + +G +++LNLF M +G+ P+ +TFL+++S
Sbjct: 601 NLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIIS 660
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC H G V+EG YF+ M I EHYACMVD+ GRAG L EA +INSM F P
Sbjct: 661 ACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDA 720
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
GVWG LLGA R H N++LA++A+++L +L+P ++ YV+LS++++ G+ ++R
Sbjct: 721 GVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLM 780
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
K + ++K PGCSWI + + H+F+A +S
Sbjct: 781 KERGVQKVPGCSWIDVNNTTHMFVAADRS 809
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 241/485 (49%), Gaps = 45/485 (9%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
E DV S++ Y + G + +AR +FD+MP K+ V W M++GY+K +++ +F+
Sbjct: 179 ELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFME 238
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
MRR NS+T + C G Q+HGLV G + D + N+++ MY + G
Sbjct: 239 MRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGH 298
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITG 274
+ +A ++F MM K D V+WN +ISGYV NG ++EA LF M D +++++ +
Sbjct: 299 LFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPL 358
Query: 275 FSSKGNLEKSIE-----------------------------------LFNMMPEKDDVTW 299
S L + E +F+ D V
Sbjct: 359 LSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVC 418
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TA+ISG+V N A F +L++ +R N +TL+SVL A A A L G ++H H++K
Sbjct: 419 TAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILK 478
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ ++++ +Y+KCG + A++ F I +++ V +NSMI+ +QNG EEA++L
Sbjct: 479 NGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDL 538
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDIL 478
FR+M G + ++ + LSAC ++ + G I+ M+ + + E + ++D+
Sbjct: 539 FRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAE--SALIDMY 596
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL-DLAKLAAQHLME-LEPDSATP 536
+ G+L A + ++M E W +++ A H L D L L + ++PD T
Sbjct: 597 SKCGNLDLACRVFDTME-EKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTF 655
Query: 537 YVVLS 541
++S
Sbjct: 656 LAIIS 660
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 175/370 (47%), Gaps = 39/370 (10%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y G ++A+ IF ++ W M+ G+ + F+ + M G + T
Sbjct: 91 YVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTF 150
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ +ACG G VH + GF+ D+ +G+S+I Y G + +A +F M
Sbjct: 151 PYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPS 210
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK---------------------- 263
+D V WN +++GYV NG+ + A +F M P
Sbjct: 211 KDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQL 270
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D T++ ++ G+L + LF+MMP+ D VTW +ISG+V N
Sbjct: 271 HGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFM 330
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
+EA F EM+ ++P+ +T SS L + ATL QG +IH ++++ + DV ++++L
Sbjct: 331 DEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSAL 390
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ +Y KC +V A +IF +IV +MISG+ NG+ AL +FR + E + N
Sbjct: 391 IDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANS 450
Query: 433 ITFLSVLSAC 442
+T SVL AC
Sbjct: 451 VTLASVLPAC 460
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L S+L + L+QG Q HA ++ + + + L+ +Y CG +DA IF +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+N MI GF G + AL + KM G +P++ TF V+ AC + V G
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 197/615 (32%), Positives = 312/615 (50%), Gaps = 58/615 (9%)
Query: 22 SIYEAFEIFATMP--------MRNA--VSYAAMITGFVRRGMFYEAEELYVNMPA---RW 68
S+ A+ +F P +RN S+ AMI + G+ Y+A L+V M A RW
Sbjct: 61 SLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRW 120
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREI 124
D+ +I E A I V + D S++ Y G + AR +
Sbjct: 121 PDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRV 180
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD M E+ +V+W M++GY K C ++ +F M G+ + T+ + C
Sbjct: 181 FDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKEL 240
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
G +VH LV DI + NS++ MY + G MDEA +F M KRD VSW ++++GY
Sbjct: 241 EVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGY 300
Query: 245 VHNGEIEEAYRLFERMP--------------------------GKDFVSW---------- 268
+ NG+ A L + M G+ W
Sbjct: 301 ILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEV 360
Query: 269 ---TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
T +I ++ N+ S +F+ ++ W AIISG ++N +A F +ML +
Sbjct: 361 IVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLME 420
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
V PN TL+S+L A A L Q +H ++++ S + + L+ +YSKCG++ A
Sbjct: 421 AVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESA 480
Query: 386 YRIFTNI--DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+ IF I +++I++++++I+G+ +G GE A++LF +M G+ PN+ITF S+L AC+
Sbjct: 481 HNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACS 540
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H GLV+EG FK M + +HY C++D+LGRAG L EA +LI +M F P VW
Sbjct: 541 HAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVW 600
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
GALLG+ H N++L ++AA+ L ELEP + YV+L+++YS +G+ RD VR+
Sbjct: 601 GALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNI 660
Query: 564 RIRKSPGCSWIILKD 578
+RK+P S I +++
Sbjct: 661 GLRKTPAHSLIEVRN 675
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 234/534 (43%), Gaps = 114/534 (21%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +RT S+N MI N C + EA +F M + +G+ + +
Sbjct: 184 MRERTLVSWNTMINGYFKNGC-VKEALMVFDWM---------------IGKGIEPDCATV 227
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVE-----KDVVAWGSMVDGYCKK 115
+P VCS YLK E R A+VE +D+ W S++D Y K
Sbjct: 228 VSVLP------VCS------YLKE---LEVGRRVHALVEVKNLGEDISVWNSLLDMYAKC 272
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + EA+ IF +M +++VV+WT M++GY+ L M+ + N +TL +
Sbjct: 273 GNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVL 332
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
AC + + G +HG R + ++I+ ++I MY + ++ + +VFS SK+
Sbjct: 333 SACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTA 392
Query: 236 SWNSLISGYVHNGEIEEAYRLFERM----------------PGKDFVS------------ 267
WN++ISG +HNG +A LF++M P F++
Sbjct: 393 PWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYL 452
Query: 268 -----------WTTMITGFSSKGNLEKSIELFNMMPEKDD--VTWTAIISGFVNNEQYEE 314
T +I +S G+LE + +FN +P+KD +TW+AII+G+ + E
Sbjct: 453 IRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGET 512
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F +M++ V+PN++T +S+L A + +++G + +++ N Q SL +
Sbjct: 513 AISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDN-------QMSLRT 565
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+ C V+D + G EEA L R M PN
Sbjct: 566 DHYTC--VIDL---------------------LGRAGRLEEAYELIRTM---AFRPNHAV 599
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE-HYACMVDILGRAGSLAEA 487
+ ++L +C VE G + + K L+ +EPG +Y + +I G +A
Sbjct: 600 WGALLGSCVIHENVELGEV---AAKWLFELEPGNTGNYVLLANIYSAVGRWRDA 650
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 116/220 (52%), Gaps = 2/220 (0%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+++ ++ G + +LF+ + +W A+I + N+ +A F++ML R
Sbjct: 60 SSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRR 119
Query: 329 -PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ T V+ A G+ IHA V +SD +QNSL+++Y CG + A R
Sbjct: 120 WPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARR 179
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + ER +VS+N+MI+G+ +NG +EAL +F M +G+ P+ T +SVL C+++
Sbjct: 180 VFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+E G ++ + N+ + ++D+ + G++ EA
Sbjct: 240 LEVGR-RVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEA 278
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDV---SIQNSLVSLYSKCGNVVDAYRIFTNI 392
S+L + ++ QIHAH + + + S + +SL + Y+ G A ++F +
Sbjct: 23 SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDEL 82
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHVGLVEEG 451
++ S+N+MI + +GL +AL LF +M G P+ T+ V+ AC L E G
Sbjct: 83 RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 326/628 (51%), Gaps = 47/628 (7%)
Query: 45 ITGFVRRGMFYEAEELYVNM-PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK--- 100
++ F++RG +EA + +V+M +R + ++ + C E + +V +
Sbjct: 907 LSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGL 966
Query: 101 -DVVAWGS-MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
VV+ G+ +++ Y K G V AR +F +M E ++++W M+ G E +F+
Sbjct: 967 DQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVH 1026
Query: 159 MRRGGMAFNSITLTILFEACGRF-FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
+ R + + T+ + AC Y Q+H + G D + ++I +Y + G
Sbjct: 1027 LLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRG 1086
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP---------------- 261
M+EA +F D SWN+++ GY+ +G+ +A RL+ M
Sbjct: 1087 KMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAK 1146
Query: 262 ----------GK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
GK D + ++ + G +E + +F+ +P DDV
Sbjct: 1147 AAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVA 1206
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WT +ISG V N Q E A + +M V+P++ T ++++ A + L QG QIHA++V
Sbjct: 1207 WTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIV 1266
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K+N D + SLV +Y+KCGN+ DA +F + R I S+N+MI G AQ+G +EAL
Sbjct: 1267 KLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQ 1326
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F+ MK G++P+++TF+ VLSAC+H GLV E + F SM+ Y IEP EHY+C+VD L
Sbjct: 1327 FFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDAL 1386
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
RAG + EA +I+SM FE ++ LL A R ++ + K A+ L+ LEP + YV
Sbjct: 1387 SRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYV 1446
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
+LS++Y+ + + R + ++K PG SW+ LK+KVHLF+AG +S + I
Sbjct: 1447 LLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYN 1506
Query: 599 TLQTISKGTKEFDW-PKHDWSLLGLERD 625
++ I K +E + P D++L+ +E +
Sbjct: 1507 KVEYIMKRIREEGYVPDTDFALVDVEEE 1534
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 159/638 (24%), Positives = 272/638 (42%), Gaps = 109/638 (17%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA----- 57
+R ++NA+++AL + ++ F +F + R+ VS V + A
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLL-RRSVVSTTRHTLAPVFKMCLLSASPSAS 779
Query: 58 EELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY-- 112
E L+ V + +W D + AL++ Y K G EA +F+ M +DVV W M+ Y
Sbjct: 780 ESLHGYAVKIGLQW-DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVD 838
Query: 113 ----------------------------------CKKGRVIEAREIFDKMPEK------- 131
CKK ++E ++ F K
Sbjct: 839 TCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKN-ILELKQ-FKAYATKLFMYDDD 896
Query: 132 --NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+V+ W + +++ + D F+ M +A + +T ++ G Q
Sbjct: 897 GSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQ 956
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG------ 243
+HG+V R G D + +GN +I MY + G + A VF M++ D +SWN++ISG
Sbjct: 957 IHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGL 1016
Query: 244 -------YVH-------------------NGEIEEAYRLFERMPG---------KDFVSW 268
+VH +E Y L ++ FVS
Sbjct: 1017 EECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVS- 1075
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T +I +S +G +E++ LF D +W AI+ G++ + + +A R +I M R
Sbjct: 1076 TALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGER 1135
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+Q+TL + A+ L QG QIHA VVK D+ + + ++ +Y KCG + A R+
Sbjct: 1136 SDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRV 1195
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F+ I + V++ +MISG +NG E AL + +M+ + P++ TF +++ AC+ + +
Sbjct: 1196 FSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTAL 1255
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
E+G ++ L N P +VD+ + G++ +A L T W A++
Sbjct: 1256 EQGRQIHANIVKL-NCAFDPFVMTSLVDMYAKCGNIEDARGLFKR-TNTRRIASWNAMIV 1313
Query: 509 AGRTHLNLDLAKLAAQHLMELE-----PDSATPYVVLS 541
H N AK A Q ++ PD T VLS
Sbjct: 1314 GLAQHGN---AKEALQFFKYMKSRGVMPDRVTFIGVLS 1348
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 205/436 (47%), Gaps = 24/436 (5%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
S+ A+ + L +G+ ARI + D +++ Y K G + AR++FD P+
Sbjct: 661 SILRQAIAASDLSLGK-RAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPD 719
Query: 131 KN--VVAWTAMVDGYM-KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
N +V W A++ D DGF LF +RR ++ TL +F+ C
Sbjct: 720 TNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSAS 779
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+HG + G +D+ + +++ +Y + G + EA +F M+ RD V WN ++ YV
Sbjct: 780 ESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDT 839
Query: 248 GEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK-------SIELFNMMPEKDD 296
EA LF F V+ T+ K N+ + + +LF + D
Sbjct: 840 CLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSD 899
Query: 297 V-TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V W +S F+ + EA F++M+ V + LT +L+ A L G QIH
Sbjct: 900 VIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHG 959
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
V++ ++ VS+ N L+++Y K G+V A +F ++E +++S+N+MISG +GL E
Sbjct: 960 IVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEEC 1019
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG----PEHY 471
++ +F + + L+P+Q T SVL AC+ + EG Y + ++ G
Sbjct: 1020 SVGMFVHLLRDSLLPDQFTVASVLRACSSL----EGGYYLATQIHACAMKAGVVLDSFVS 1075
Query: 472 ACMVDILGRAGSLAEA 487
++D+ + G + EA
Sbjct: 1076 TALIDVYSKRGKMEEA 1091
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 15/292 (5%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TALI+ + EA +F + S+ A++ G++ G F +A LY+ M
Sbjct: 1076 TALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGER 1135
Query: 71 S---VCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEARE 123
S NA + VG ++ +I +V++ D+ ++D Y K G + AR
Sbjct: 1136 SDQITLVNAAKAAGGLVG-LKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARR 1194
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F ++P + VAWT M+ G ++ E + MR + + T L +AC
Sbjct: 1195 VFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTA 1254
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+G Q+H + + +D + S++ MY + G +++A +F + R SWN++I G
Sbjct: 1255 LEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVG 1314
Query: 244 YVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
+G +EA + F+ M + D V++ +++ S G + ++ E F M
Sbjct: 1315 LAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSM 1366
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 199/613 (32%), Positives = 310/613 (50%), Gaps = 112/613 (18%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA-------RWRDS--- 71
S +A +F + +RN++S+ ++I+ + RRG A +L+ +M + D+
Sbjct: 253 SANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSE 312
Query: 72 ----------------------------VCSNALISGYLKVGRCEEAARIFEAMVEKDVV 103
N L++ Y K G +A +FE MVEKD V
Sbjct: 313 FSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSV 372
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC-FEDGFDLFLSMRRG 162
+W S++ G + +A E+F MPE + V+W +++ + FL M RG
Sbjct: 373 SWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRG 432
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G + +T + A + Q+H LV ++ D +GN
Sbjct: 433 GWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGN--------------- 477
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
+L+S Y GE+ E ++F RM
Sbjct: 478 ----------------ALLSCYGKCGEMNECEKIFARMS--------------------- 500
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR--WFIEMLRKDVRPNQLTLSSVLSA 340
+D+V+W ++ISG+++NE +A WF M++K R + T +++LSA
Sbjct: 501 ---------ETRDEVSWNSMISGYIHNELLHKAMDLVWF--MMQKGQRLDSFTFATILSA 549
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A+ ATL +G ++HA ++ +ESDV + ++LV +YSKCG + A R F + RN+ S+
Sbjct: 550 CASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSW 609
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
NSMISG+A++G GE+AL LF +M +G P+ +TF+ VLSAC+HVG VEEGF +FKSM
Sbjct: 610 NSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSE 669
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA-----GRTHLN 515
+Y + P EH++CMVD+LGRAG L E D INSM +P +W +LGA GR N
Sbjct: 670 VYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGR---N 726
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+L + AA+ L+ELEP +A YV+L+++Y+ K D + R K ++K GCSW+
Sbjct: 727 TELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVT 786
Query: 576 LKDKVHLFLAGRK 588
+KD VH+F+AG K
Sbjct: 787 MKDGVHVFVAGDK 799
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 216/474 (45%), Gaps = 85/474 (17%)
Query: 54 FYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+ + E + ++ R++ S CS +L+ + +F + ++++ Y
Sbjct: 95 LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLS---------NTLINIYV 145
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
+ G + A+++FD+M +N+V W ++ GY + ++ F M R G N
Sbjct: 146 RIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGS 205
Query: 174 LFEACGRF--FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR-LGFMDEANKVFSMMS 230
AC + GVQ+HGL+S+ + D+++ N +I+MYG L ++A VF +
Sbjct: 206 ALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIG 265
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERM----------PGKDFVSWTTMITG------ 274
R+++SWNS+IS Y G+ AY LF M P F ++ + G
Sbjct: 266 IRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGRE 325
Query: 275 ------------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
++ G + + +F +M EKD V+W ++ISG NE
Sbjct: 326 VHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNE 385
Query: 311 QYE--------------------------------EAFRWFIEMLRKDVRPNQLTLSSVL 338
E +A ++F++M+R +++T ++L
Sbjct: 386 CSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINIL 445
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE-RNI 397
SA ++ + QIHA V+K + D +I N+L+S Y KCG + + +IF + E R+
Sbjct: 446 SAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDE 505
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
VS+NSMISG+ N L +A++L M +G + TF ++LSAC V +E G
Sbjct: 506 VSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERG 559
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 150/305 (49%), Gaps = 13/305 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFV-RRGMFYEAEE 59
M ++ S S+N++I+ L N CS +A E+F+ MP + VS+ ++I +A +
Sbjct: 366 MVEKDSVSWNSLISGLDQNECS-EDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVK 424
Query: 60 LYVN-MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYC 113
++ M W S + I + E + A+V K D +++ Y
Sbjct: 425 YFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYG 484
Query: 114 KKGRVIEAREIFDKMPE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
K G + E +IF +M E ++ V+W +M+ GY+ + DL M + G +S T
Sbjct: 485 KCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFA 544
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ AC G++VH R + D+++G++++ MY + G +D A++ F +M R
Sbjct: 545 TILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR 604
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELF 288
+ SWNS+ISGY +G E+A +LF RM D V++ +++ S G +E+ E F
Sbjct: 605 NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHF 664
Query: 289 NMMPE 293
M E
Sbjct: 665 KSMSE 669
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/488 (35%), Positives = 263/488 (53%), Gaps = 21/488 (4%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR IFD++ ++++ W ++ Y++ DG LF + + N TL + + C R
Sbjct: 69 ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPDN-FTLPCVIKGCAR 127
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+EG Q+HGL + GF D+ + S++ MY + G +D A KVF M +D V WNSL
Sbjct: 128 LGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSL 187
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I G + VSW MI G+ G+ + ++ELF MP D VTW
Sbjct: 188 IDG--------------------NLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWN 227
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+I+G+ N Q+ +A + F ML+ RP+ TL SVLSA + A L +G IH+++ K
Sbjct: 228 LMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKN 287
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
E D + SL+ +Y+KCG + A +F I ++ + + ++I G +G+ AL LF
Sbjct: 288 GFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALF 347
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M GL PN I F+ VL+ACNH GLV++G YF M Y IEP EHY C+VDIL R
Sbjct: 348 LEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCR 407
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA + I +M P +W +LLG R H +D+ + AAQ ++E+ P++ Y++L
Sbjct: 408 AGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILL 467
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S++Y+ G + VR + RK PGCS + K +H F+ G S KEI +
Sbjct: 468 SNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKM 527
Query: 601 QTISKGTK 608
+ + K
Sbjct: 528 SEMKEKLK 535
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 164/386 (42%), Gaps = 29/386 (7%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMP---MRNAVSYAAMITGFVRRGMFYEAEEL 60
R+ +N +I + N S ++ +F + + + + +I G R G+ E +++
Sbjct: 79 RSLIHWNTIIKCYVENQFS-HDGIVLFHELVHEYLPDNFTLPCVIKGCARLGVVQEGKQI 137
Query: 61 Y--VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGS----------- 107
+ D +L++ Y K G + A ++F+ M++KDVV W S
Sbjct: 138 HGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNA 197
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
M++GY K G A E+F +MP ++V W M+ GY F D +F M + G +
Sbjct: 198 MINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPS 257
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
TL + A +G +H + + GF+ D ILG S+I MY + G ++ A VF
Sbjct: 258 HATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFR 317
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK 283
+ K+ W ++I G +G A LF M + + ++ + G ++
Sbjct: 318 AIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDD 377
Query: 284 SIELFNMMPEKDDVTWT-----AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+ F+MM + + T ++ EEA M + PN++ S+L
Sbjct: 378 GRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENM---PISPNKVIWMSLL 434
Query: 339 SASAATATLNQGSQIHAHVVKMNMES 364
S ++ G V+++ E+
Sbjct: 435 GGSRNHGKIDIGEYAAQRVIEVAPET 460
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS--KCGNVVDAY 386
P+ L LS + SA Q+HA +K + + + + L++LYS K ++ A
Sbjct: 15 PHNLHLSLFQTCSAPQEV----EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYAR 70
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
IF I R+++ +N++I + +N + + LF ++ E L P+ T V+ C +G
Sbjct: 71 SIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLG 129
Query: 447 LVEEG 451
+V+EG
Sbjct: 130 VVQEG 134
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/525 (33%), Positives = 290/525 (55%), Gaps = 7/525 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y V AR++FD++PE+NV+ M+ Y+ + +G +F +M + +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + +AC G ++HG ++ G + +GN +++MYG+ GF+ EA V
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFS--SKGNL 281
MS+RD VSWNSL+ GY N ++A + M D + +++ S + N+
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
++F M +K V+W +I ++ N EA + M P+ ++++SVL A
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
T+ L+ G +IH ++ + + ++ ++N+L+ +Y+KCG + A +F N+ R++VS+
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MIS + +G G +A+ LF K++D GLVP+ I F++ L+AC+H GL+EEG FK M
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I P EH ACMVD+LGRAG + EA I M+ EP VWGALLGA R H + D+ L
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA L +L P+ + YV+LS++Y+ G+ + +R K K ++K+PG S + + +H
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
FL G +S EI L + K KE + P + +L +E +
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEE 604
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/514 (22%), Positives = 207/514 (40%), Gaps = 105/514 (20%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------------PARWRD 70
+ A ++F +P RN + MI +V G + E +++ M P +
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 71 SVCS-------------------------NALISGYLKVGRCEEAARIFEAMVEKDVVAW 105
CS N L+S Y K G EA + + M +DVV+W
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 209
Query: 106 GSMVDGYCKKGR-------------------------------------VIEAREIFDKM 128
S+V GY + R V+ +++F KM
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKM 269
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+K++V+W M+ YMK + +L+ M G +++++T + ACG G
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++HG + R +++L N++I MY + G +++A VF M RD VSW ++IS Y +G
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Query: 249 EIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----W 299
+A LF ++ D +++ T + S G LE+ F +M + +T
Sbjct: 390 RGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL 449
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
++ + +EA+R+ +M + PN+ ++L A + + G + +
Sbjct: 450 ACMVDLLGRAGKVKEAYRFIQDM---SMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
Query: 360 MNMESDVSIQNSLVSLYSKCG---------NVVDAYRIFTNIDERNIVSYNSMISGF--- 407
+ E L ++Y+K G N++ + + N N V N +I F
Sbjct: 507 LAPEQS-GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASN-VEVNRIIHTFLVG 564
Query: 408 -----AQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+ + E L +KMK+ G VP+ + L
Sbjct: 565 DRSHPQSDEIYRELDVLVKKMKELGYVPDSESAL 598
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+E+ +K + L VL TL +H+ ++ ++ + S+ L+ Y+
Sbjct: 31 LELDQKSPQETVFLLGQVLDTYPDIRTLRT---VHSRIILEDLRCNSSLGVKLMRAYASL 87
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+V A ++F I ERN++ N MI + NG E + +F M + P+ TF VL
Sbjct: 88 KDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 440 SACNHVGLVEEGF-IYFKSMK-----TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
AC+ G + G I+ + K TL+ + G +V + G+ G L+EA +++
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLF-VGNG------LVSMYGKCGFLSEARLVLDE 200
Query: 494 MT 495
M+
Sbjct: 201 MS 202
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 166/431 (38%), Gaps = 67/431 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M ++ S+N MI + N + EA E+++ M +AVS +++
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPV-EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 57 AEEL--YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+++ Y+ + + NALI Y K G E+A +FE M +DVV+W +M+ Y
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
GR +A +F K+ + G+ +SI
Sbjct: 388 SGRGCDAVALFSKLQD-------------------------------SGLVPDSIAFVTT 416
Query: 175 FEACGRFFRYREGVQVHGLVS-RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KR 232
AC EG L++ + + ++ + GR G + EA + MS +
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476
Query: 233 DAVSWNSLISG-YVHNGE---IEEAYRLFERMPGKDFVSWTTMITGFSSK-GNLEKSIEL 287
+ W +L+ VH+ + A +LF+ P + + +++ +K G E+ +
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS--GYYVLLSNIYAKAGRWEEVTNI 534
Query: 288 FNMM--------PEKDDVTWTAIISGFV----NNEQYEEAFRWFIEMLRKD-----VRPN 330
N+M P +V II F+ ++ Q +E +R +++K V +
Sbjct: 535 RNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDS 594
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK---CGNVVDAYR 387
+ L V T ++ MN + + N+ + + CG+ A +
Sbjct: 595 ESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAK 654
Query: 388 IFTNIDERNIV 398
+ + I R I+
Sbjct: 655 LISQITSREII 665
>gi|15240281|ref|NP_198573.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g37570
gi|9757967|dbj|BAB08303.1| unnamed protein product [Arabidopsis thaliana]
gi|332006824|gb|AED94207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 550
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 269/484 (55%), Gaps = 33/484 (6%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFF 182
+F+++P W ++ GY F + + + M R G+A + T ++ + C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+ R G VHGLV R GFD D+++G S + YG+ + A KVF M +R+AVSW +L+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT---- 298
YV +GE+EEA +F+ MP ++ SW ++ G G+L + +LF+ MP++D ++
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 299 ---------------------------WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
W+A+I G+ N Q EAF+ F EM K+V+P++
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 332 LTLSSVLSASAATATLNQGSQIHAHV-VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ ++SA + ++ +++ +MN S + +L+ + +KCG++ A ++F
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ +R++VSY SM+ G A +G G EA+ LF KM DEG+VP+++ F +L C LVEE
Sbjct: 365 EMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEE 424
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G YF+ M+ Y+I P+HY+C+V++L R G L EA +LI SM FE WG+LLG
Sbjct: 425 GLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGC 484
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
H N ++A++ A+HL ELEP SA YV+LS++Y+ + + D +R K I K G
Sbjct: 485 SLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICG 544
Query: 571 CSWI 574
SWI
Sbjct: 545 RSWI 548
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 164/313 (52%), Gaps = 18/313 (5%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
++ A ++F MP RNAVS+ A++ +V+ G EA+ ++ MP R S NAL+ G +
Sbjct: 161 LFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSW--NALVDGLV 218
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
K G A ++F+ M ++D++++ SM+DGY K G ++ AR++F++ +V AW+A++ G
Sbjct: 219 KSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILG 278
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF--FRYREGVQ--VHGLVSRFG 198
Y + + F +F M + + + L AC + F E V +H +++F
Sbjct: 279 YAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS 338
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
Y + ++I M + G MD A K+F M +RD VS+ S++ G +G EA RLFE
Sbjct: 339 SHYVV---PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFE 395
Query: 259 RMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNN 309
+M + D V++T ++ +E+ + F +M +K + ++ I++
Sbjct: 396 KMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRT 455
Query: 310 EQYEEAFRWFIEM 322
+ +EA+ M
Sbjct: 456 GKLKEAYELIKSM 468
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 171/393 (43%), Gaps = 87/393 (22%)
Query: 69 RDSVCSNALISGYLKVGRCEE---AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
+D V + + Y G+C++ A ++F M E++ V+W ++V Y K G + EA+ +F
Sbjct: 143 KDVVVGTSFVDFY---GKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF 199
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
D MPE+N+ +W A+VDG +K + LF M +
Sbjct: 200 DLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPK------------------------ 235
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
DII S+I Y + G M A +F D +W++LI GY
Sbjct: 236 ---------------RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYA 280
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITG---------------------------FSSK 278
NG+ EA+++F M K+ ++ G FSS
Sbjct: 281 QNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH 340
Query: 279 -------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
G+++++ +LF MP++D V++ +++ G + EA R F +M+ +
Sbjct: 341 YVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE 400
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHV-VKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ P+++ + +L + + +G + + K ++ + + +V+L S+ G + +
Sbjct: 401 GIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKE 460
Query: 385 AYRIFTNID-ERNIVSYNSMISGFAQNGLGEEA 416
AY + ++ E + ++ S++ G + +G E A
Sbjct: 461 AYELIKSMPFEAHASAWGSLLGGCSLHGNTEIA 493
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI-QNSLVSLYSKCG 380
M+++ P+ L+L ++ + LNQ IHA +++ +E D ++ + S S
Sbjct: 1 MIQRLSHPSLLSLETLFKLCKSEIHLNQ---IHARIIRKGLEQDQNLISIFISSSSSSSS 57
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVL 439
++ + +F + +N +I G++ L E +++ +M GL P++ TF V+
Sbjct: 58 SLSYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVM 117
Query: 440 SACNHVGLVEEG 451
C++ G V G
Sbjct: 118 KVCSNNGQVRVG 129
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/609 (30%), Positives = 330/609 (54%), Gaps = 45/609 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSN 75
++ + +F M R+ VS+ +++TG+ + EL+ M P + S
Sbjct: 152 NVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIA 211
Query: 76 ALIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
AL + G + +G + A + + E + + S++ K G + +AR +FD M K+ V
Sbjct: 212 ALANQGAVAIGM-QIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSV 270
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W +M+ G++ + F+ F +M+ G T + ++C +H
Sbjct: 271 SWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKT 330
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDAVSWNSLISGYVHNGEIEEA 253
+ G + + +++ + +D+A +FS+M + VSW ++ISGY+ NG+ ++A
Sbjct: 331 LKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQA 390
Query: 254 YRLFERMPGK----DFVSWTTMIT-------------------------------GFSSK 278
LF M + + +++T++T F
Sbjct: 391 VNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKI 450
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
GN+ ++++F ++ KD + W+A+++G+ + EEA + F ++ R+ ++PN+ T S++
Sbjct: 451 GNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSII 510
Query: 339 SA-SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+A +A TA++ QG Q HA+ +K+ + + + + +SLV+LY+K GN+ A+ IF ER++
Sbjct: 511 NACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDL 570
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
VS+NSMISG+AQ+G ++AL +F +M+ L + ITF+ V+SAC H GLV +G YF
Sbjct: 571 VSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNI 630
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
M ++I P EHY+CM+D+ RAG L +A+D+IN M F P VW +L A R H N++
Sbjct: 631 MINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIE 690
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
L KLAA+ ++ LEP + YV+LS++Y+ G + VR +R++K PG SWI +K
Sbjct: 691 LGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVK 750
Query: 578 DKVHLFLAG 586
+K + FLAG
Sbjct: 751 NKTYSFLAG 759
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 241/475 (50%), Gaps = 55/475 (11%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALIS 79
A ++F P+R+ + ++ + R EA L+V++ P + S C ++ +
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMS-CVLSVCA 113
Query: 80 GYLK--VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
G VG + +V V S+VD Y K G V + R +FD+M +++VV+W
Sbjct: 114 GSFNGTVGEQVHCQCVKCGLVHHLSVG-NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWN 172
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
+++ GY + ++LF M+ G + T++ + A G+Q+H LV +
Sbjct: 173 SLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKL 232
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
GF+ + ++ NS+I+M + G + +A VF M +D+VSWNS+I+G+V NG+ EA+ F
Sbjct: 233 GFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETF 292
Query: 258 ERM-------PGKDFVS------------------WTTMITGFSSKGN------------ 280
M F S T+ +G S+ N
Sbjct: 293 NNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKC 352
Query: 281 --LEKSIELFNMMPE-KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
++ + LF++M + V+WTA+ISG++ N ++A F M R+ V+PN T S++
Sbjct: 353 KEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTI 412
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L+ A S+IHA V+K N E S+ +L+ + K GN+ DA ++F I+ +++
Sbjct: 413 LTVQHAVFI----SEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDV 468
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH-VGLVEEG 451
+++++M++G+AQ G EEA +F ++ EG+ PN+ TF S+++AC VE+G
Sbjct: 469 IAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQG 523
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 64/341 (18%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+++FD+ P +++ ++ Y + D ++ LF+S+ R G++ +S T++ + C
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F G QVH + G + + +G NSL
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVG-------------------------------NSL 143
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+ Y G + + R+F+ M ++D V+W
Sbjct: 144 VDMYTKTGNVRDGRRVFDE-------------------------------MGDRDVVSWN 172
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
++++G+ N ++ + F M + RP+ T+S+V++A A + G QIHA VVK+
Sbjct: 173 SLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKL 232
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
E++ + NSL+S+ SK G + DA +F N++ ++ VS+NSMI+G NG EA F
Sbjct: 233 GFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETF 292
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
M+ G P TF SV+ +C L E G + KTL
Sbjct: 293 NNMQLAGAKPTHATFASVIKSC--ASLKELGLVRVLHCKTL 331
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 113/212 (53%), Gaps = 7/212 (3%)
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+LF+ P +D ++ + +Q +EA F+ + R + P+ T+S VLS A +
Sbjct: 57 QLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSF 116
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
G Q+H VK + +S+ NSLV +Y+K GNV D R+F + +R++VS+NS+++
Sbjct: 117 NGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLT 176
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNI 464
G++ N ++ LF M+ EG P+ T +V++A + G V G I+ +K +
Sbjct: 177 GYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFE- 235
Query: 465 EPGPEHYAC--MVDILGRAGSLAEAIDLINSM 494
E C ++ +L ++G L +A + ++M
Sbjct: 236 ---TERLVCNSLISMLSKSGMLRDARVVFDNM 264
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 279/493 (56%), Gaps = 38/493 (7%)
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+IFD++ N W M+ Y++ + E L+ M + + ++ T ++ +AC
Sbjct: 84 QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 143
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G ++H V + GFD D+ + N++I MY G M RDA
Sbjct: 144 LEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNM------------RDA-------- 183
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE---LFNMMPEKDDVTW 299
+LF+ P D VSW +++ G+ KG++ + +E LFN M EKD V+W
Sbjct: 184 -----------RKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSW 232
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+A+ISG+ N YEEA FIEM +R +++ + SVLSA A + + G IH V++
Sbjct: 233 SALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIR 292
Query: 360 MNMESDVSIQNSLVSLYS----KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
M +ES V++QN+L+ +YS KCG V +A +F ++E+ + S+N++I G A NGL E
Sbjct: 293 MGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVER 352
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
+L++F +MK+ G++PN+ITF+ VL AC H+GLV+EG +F SM + IEP +HY CMV
Sbjct: 353 SLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMV 412
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D+LGRAG L EA LI SM P WGALLGA + H + ++ + + L+EL+PD
Sbjct: 413 DLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDG 472
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
+V+LS++++ G D VR K + + K+PGCS I VH FLAG K+ + +
Sbjct: 473 FHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINK 532
Query: 596 IEVTLQTISKGTK 608
+E L ++K K
Sbjct: 533 VEGMLNEMAKRLK 545
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 199/438 (45%), Gaps = 48/438 (10%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMRNA----VSYAAMITGFVRRGMFYEAEELYVNM 64
+N M+ A I +N S +A ++ M N +Y ++ R + + +E++ ++
Sbjct: 97 WNTMMRAYIQSN-SAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHV 155
Query: 65 PARWRDS--VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG---RVI 119
DS N LI+ Y G +A ++F+ D V+W S++ GY KKG +V+
Sbjct: 156 LKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVM 215
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EA ++F++M EK++V+W+A++ GY + +E+ +F+ M GM + + + + AC
Sbjct: 216 EAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACA 275
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG----RLGFMDEANKVFSMMSKRDAV 235
+ G +HGLV R G + + L N++I MY + G ++ A +VF+ M ++
Sbjct: 276 HLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVS 335
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
SWN+LI G NG +E + +F M + +
Sbjct: 336 SWNALIIGLAVNGLVERSLDMFSEMKNNGVIP---------------------------N 368
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIH 354
++T+ ++ + +E F M+ K + PN ++ LN+ ++
Sbjct: 369 EITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKL- 427
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE--RNIVSYNSMISG-FAQNG 411
+ M M DV+ +L+ K G+ R+ + E + ++ ++S FA G
Sbjct: 428 --IESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKG 485
Query: 412 LGEEALNLFRKMKDEGLV 429
E+ L + MK +G+V
Sbjct: 486 DWEDVLEVRGMMKQQGVV 503
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 159/315 (50%), Gaps = 49/315 (15%)
Query: 239 SLISGYVHNGE-IEEAYRLFERMPGKDFVSWT---TMITGFSSKG---NLEKSIELFNMM 291
S++ ++HN +++ R+ +M F+S T + + FS+ L+ S+++F+ +
Sbjct: 30 SILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRI 89
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ W ++ ++ + E+A + M++ +V P+ T V+ A A G
Sbjct: 90 ENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGK 149
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGN------------------------------ 381
+IH HV+K+ +SDV +QN+L+++Y+ CGN
Sbjct: 150 EIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKG 209
Query: 382 ----VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
V++A+++F +DE+++VS++++ISG+ QNG+ EEAL +F +M G+ +++ +S
Sbjct: 210 DMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVS 269
Query: 438 VLSACNHVGLVE-----EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
VLSAC H+ +V+ G + +++ N++ H D+ + G + A+++ N
Sbjct: 270 VLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYS--DMYMKCGCVENALEVFN 327
Query: 493 SMTFEPPPGVWGALL 507
M E W AL+
Sbjct: 328 GME-EKGVSSWNALI 341
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 145/308 (47%), Gaps = 21/308 (6%)
Query: 6 SASYNAMITALINNN--CSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
S S+N+++ + + EA+++F M ++ VS++A+I+G+ + GM+ EA +++
Sbjct: 195 SVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIE 254
Query: 64 MPARWR--DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM--------VDGYC 113
M A D V +++S + + I ++ + ++ ++ D Y
Sbjct: 255 MNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYM 314
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G V A E+F+ M EK V +W A++ G E D+F M+ G+ N IT
Sbjct: 315 KCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMG 374
Query: 174 LFEACGRFFRYREG-VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSK 231
+ AC EG ++ + G + ++ ++ + GR G ++EA K+ SM
Sbjct: 375 VLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMA 434
Query: 232 RDAVSWNSLISGYVHNGEIEEAYR----LFERMPGKDFVSWTTMITG-FSSKGNLEKSIE 286
D +W +L+ +G+ E R L E P D + +++ F+SKG+ E +E
Sbjct: 435 PDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHD--GFHVLLSNIFASKGDWEDVLE 492
Query: 287 LFNMMPEK 294
+ MM ++
Sbjct: 493 VRGMMKQQ 500
>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 324/596 (54%), Gaps = 22/596 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
+A ++F +P RNAV++ A++ G+V+ GM+ EA L M P R S C +A
Sbjct: 202 DARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASA 261
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G ++ G+ A I + E D + S+++ YCK G + A IFD M EK+VV W
Sbjct: 262 NMGGIEEGKQSHAIAIVNGL-ELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWN 320
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ GY++ E+ + MRR + F+ +TL+ L A + G ++ R
Sbjct: 321 LLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRH 380
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G + DI+L ++ + MY + G + A KVF ++D + WN+L+S Y +G EA RLF
Sbjct: 381 GLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLF 440
Query: 258 -----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVN 308
E +P + ++W +I G + ++ E+F M + ++WT +++G V
Sbjct: 441 YEMQLESVP-PNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQ 499
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES-DVS 367
N EEA + +M +RPN T++ LSA A+L+ G IH ++++ S S
Sbjct: 500 NGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYSFSAS 559
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I+ SLV +Y+KCG++ A R+F + + YN+MIS +A G EA+ L+R ++D G
Sbjct: 560 IETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGG 619
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ P+ IT S+LSACN+ V + F+ M + + ++P EHY MVD+L AG +A
Sbjct: 620 VKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLASAGETDKA 679
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ L+ M ++P + +L + +L + ++HL+E EPD++ YV++S+ Y+V
Sbjct: 680 LRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNAYAVE 739
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILK---DKVHLFLAGRKSCLDLKEIEVTL 600
G + ++R K+K ++K PGCSWI +K + VH+F+A K+ L EI+ L
Sbjct: 740 GSWDEVAKMREMMKVKGLKKKPGCSWIQIKGEEEGVHVFVANDKTHLRNDEIQRML 795
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 257/528 (48%), Gaps = 64/528 (12%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
S SY +++L N I EA + M RN + I G + +G YE
Sbjct: 11 STSYFHRVSSLCKNG-EIREALSLVTEMDYRN-IRIGPEIYGEILQGCVYE--------- 59
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
RD + + LK G + AR +E +V + Y K + A+ +F
Sbjct: 60 ---RDLCTGQQIHAQILKKG--DFYAR--NEYIETKLVIF------YAKCDALEIAQVLF 106
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
K+ +NV +W A++ ++ E F+ M G+ ++ + + +ACG R
Sbjct: 107 SKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSR 166
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G VHG V++ G + + + +S+ MYG+ G +D+A KVF + R+AV+WN+L+ GYV
Sbjct: 167 FGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYV 226
Query: 246 HNGEIEEAYRLFERM--------------------------PGK-------------DFV 266
NG EEA RL M GK D +
Sbjct: 227 QNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNI 286
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
T+++ + G +E + +F+ M EKD VTW +ISG+V EEA M R++
Sbjct: 287 LGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRREN 346
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
++ + +TLS+++SA+ +T L G +I + ++ +ESD+ + ++ V +Y+KCG++V+A
Sbjct: 347 LKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAK 406
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
++F + +++++ +N+++S +A +GL EAL LF +M+ E + PN IT+ ++ + G
Sbjct: 407 KVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 466
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
V E F M++ I P + M++ L + G EAI + M
Sbjct: 467 QVNEAKEMFLQMQS-SGIFPNLISWTTMMNGLVQNGCSEEAILFLRKM 513
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 147/580 (25%), Positives = 255/580 (43%), Gaps = 95/580 (16%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALISGY 81
+F+ + +RN S+AA+I R G+ A +V M P + +VC +
Sbjct: 105 LFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQW 164
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+ GR + +A + V S+ D Y K G + +AR++FD +P++N VAW A++
Sbjct: 165 SRFGRGVHG-YVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMV 223
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY++ +E+ L MR+ G+ +T++ A EG Q H + G +
Sbjct: 224 GYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLEL 283
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D ILG SI+ Y ++G ++ A +F M ++D V+WN LISGYV G +EEA + + M
Sbjct: 284 DNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMR 343
Query: 262 GK----DFVSWTTMITGFSSKGNLEKSIEL------------------------------ 287
+ D V+ +T+++ +S NL+ E+
Sbjct: 344 RENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIV 403
Query: 288 -----FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
F+ +KD + W ++S + ++ EA R F EM + V PN +T + ++ +
Sbjct: 404 NAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLL 463
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+N+ ++ + M+S IF N++S+ +
Sbjct: 464 RNGQVNEAKEMF-----LQMQSS---------------------GIFP-----NLISWTT 492
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLVEEGFIYFKS 457
M++G QNG EEA+ RKM++ GL PN T LSAC H G G+I
Sbjct: 493 MMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQ 552
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
Y+ E +VD+ + G + +A + S P ++ A++ A + +
Sbjct: 553 Q---YSFSASIE--TSLVDMYAKCGDINKAERVFGSKLCSELP-LYNAMISAYALYGKVR 606
Query: 518 LAKLAAQHLME--LEPDSATPYVVLSDLYSVIGKKRDGNR 555
A + L + ++PD+ T ++ L S RD N+
Sbjct: 607 EAITLYRSLEDGGVKPDNIT----ITSLLSACNYGRDVNQ 642
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 199/427 (46%), Gaps = 55/427 (12%)
Query: 187 GVQVHGLVSRFG--FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS-- 242
G Q+H + + G + + + ++ Y + ++ A +FS + R+ SW ++I
Sbjct: 65 GQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVK 124
Query: 243 -----------GYVH---NGEIEEAYRLFERMPGKDFVSWTTM---ITGFSSKGNLEKSI 285
G+V NG + + + + W+ + G+ +K L +
Sbjct: 125 CRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCV 184
Query: 286 --------------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
++F+ +P+++ V W A++ G+V N YEEA R EM ++
Sbjct: 185 FVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKE 244
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ P ++T+S+ LSASA + +G Q HA + +E D + S+++ Y K G + A
Sbjct: 245 GIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYA 304
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
IF + E+++V++N +ISG+ Q GL EEA+ + + M+ E L + +T +++SA
Sbjct: 305 EMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATST 364
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEH----YACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
++ G K ++ Y I G E + VD+ + GS+ A + +S T +
Sbjct: 365 QNLKLG----KEIQC-YCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDS-TVQKDLI 418
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
+W LL A + + L+ A + E++ +S P V+ +L ++ R+G K+
Sbjct: 419 LWNTLLSA---YADSGLSGEALRLFYEMQLESVPPNVITWNLI-ILSLLRNGQVNEAKEM 474
Query: 562 LKRIRKS 568
+++ S
Sbjct: 475 FLQMQSS 481
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 282/522 (54%), Gaps = 44/522 (8%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++D Y K G++ A E+FD MPE+NVV+WTA++ G++ + LF MR G +
Sbjct: 44 NLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSP 103
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
N TL+ +ACG R GVQ+HG+ R GF+ ++ NS++ MY + + +A +VF
Sbjct: 104 NEFTLSATLKACGGG--TRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVF 161
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVSWTTMITGFSSKG-- 279
++ R+ +WNS+ISGY H G+ ++ +F M + D ++ +++ S G
Sbjct: 162 DVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAA 221
Query: 280 -----------------------------------NLEKSIELFNMMPEKDDVTWTAIIS 304
L ++++F+ + ++ + WT +I
Sbjct: 222 REGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIV 281
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G Q +EA F VR + LSSV++ A A + QG Q+H + K
Sbjct: 282 GHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL 341
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
DVS+ NSLV +Y KCG +A R F + RN+VS+ +MI+G ++G G EA++LF +M+
Sbjct: 342 DVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQ 401
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
+EG+ +++ +L++LSAC+H GLV+E YF + + P EHYACMVD+LGRAG L
Sbjct: 402 EEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGEL 461
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA +LI SM EP GVW LL A R H ++ + + L+ ++ D+ YV+LS++
Sbjct: 462 REAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNIL 521
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ G+ R+ +R + K +RK GCSW + +VH F G
Sbjct: 522 AEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGG 563
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 157/318 (49%), Gaps = 40/318 (12%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L A R R GVQ+H + + GF D +L N++I MY + G + A +VF M +R+
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVSWTTMI---------------- 272
VSW +L+ G++H+GE E RLF M G +F T+
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVC 129
Query: 273 --TGFSSKGNLEKSI--------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
TGF + S+ +F+++P ++ TW ++ISG+ + Q ++
Sbjct: 130 VRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSL 189
Query: 317 RWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHA--HVVKMNMESDVSIQNSLV 373
F EM R+ D +P++ T +S+L A + +G+Q+HA V ++ S+ + +L+
Sbjct: 190 LVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALL 249
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y KC + A ++F ++ RN + + ++I G AQ G +EA+ LFR+ G+ +
Sbjct: 250 DVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGH 309
Query: 434 TFLSVLSACNHVGLVEEG 451
SV++ LVE+G
Sbjct: 310 VLSSVVAVFADFALVEQG 327
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 7/200 (3%)
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G D + +I ++ G L + E+F+ MPE++ V+WTA++ GF+++ + E R F E
Sbjct: 36 GSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGE 95
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M PN+ TLS+ L A G QIH V+ E + NSLV +YSK
Sbjct: 96 MRGSGTSPNEFTLSATLKACGGGT--RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRW 153
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK---DEGLVPNQITFLSV 438
DA R+F I RN+ ++NSMISG+A G G ++L +FR+M+ DE P++ TF S+
Sbjct: 154 TGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDE--QPDEFTFASL 211
Query: 439 LSACNHVGLVEEGFIYFKSM 458
L AC+ +G EG +M
Sbjct: 212 LKACSGLGAAREGAQVHAAM 231
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 184/438 (42%), Gaps = 67/438 (15%)
Query: 16 LINNN-------CS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--- 64
++NNN C ++ A E+F MP RN VS+ A++ GF+ G E L+ M
Sbjct: 40 MLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGS 99
Query: 65 ---PARWRDS----VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
P + S C +G G C FE DVVA S+V Y K
Sbjct: 100 GTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTG--FEG---HDVVA-NSLVVMYSKGRW 153
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFE 176
+AR +FD +P +N+ W +M+ GY D +F M RR + T L +
Sbjct: 154 TGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLK 213
Query: 177 ACGRFFRYREGVQVHGLVSRFGFD--YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
AC REG QVH ++ G + IL +++ +Y + + A +VF + +R+A
Sbjct: 214 ACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNA 273
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDFVSW 268
+ W ++I G+ G+++EA LF R GK +
Sbjct: 274 IQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCY 333
Query: 269 T-------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
T +++ + G ++ F MP ++ V+WTA+I+G + EA
Sbjct: 334 TAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREA 393
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVS 374
F EM + V +++ ++LSA + + +++ + + + + M +V
Sbjct: 394 IDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVD 453
Query: 375 LYSKCGNVVDAYRIFTNI 392
L + G + +A + ++
Sbjct: 454 LLGRAGELREAKELILSM 471
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 67/110 (60%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
++ +L ASA ++L G Q+HA ++K+ SD + N+L+ +Y+KCG + A +F +
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
ERN+VS+ +++ GF +G E L LF +M+ G PN+ T + L AC
Sbjct: 67 ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG 116
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 183/439 (41%), Gaps = 77/439 (17%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMR-----NAVSYAAMITGFVRRGMFYEAE 58
R A++N+MI+ + ++ +F M R + ++A+++ G E
Sbjct: 167 RNLATWNSMISGYAHAG-QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGA 225
Query: 59 ELYVNMPARWRDSVCSNALISG-----YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+++ M R S SNA+++G Y+K R A ++F+ + ++ + W +++ G+
Sbjct: 226 QVHAAMAVRG-VSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHA 284
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
++G+V EA +F + W++ V R G +S+
Sbjct: 285 QEGQVKEAMCLFRRF-------WSSGV-------------------RADGHVLSSVVAVF 318
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
F +G QVH ++ D+ + NS++ MY + G EA + F M R+
Sbjct: 319 -----ADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARN 373
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
VSW ++I+G +G EA LFE M E+ + E
Sbjct: 374 VVSWTAMINGVGKHGHGREAIDLFEEMQ--------------------EEGV-------E 406
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQ 352
D+V + A++S ++ +E R+F + + + +RP + ++ L + +
Sbjct: 407 ADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKE 466
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVV---DAYRIFTNIDERNIVSYNSMISGFAQ 409
+ ++ M ME V + +L+S +V + + +D N V+Y + + A+
Sbjct: 467 L---ILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAE 523
Query: 410 NGLGEEALNLFRKMKDEGL 428
G E + M+ +GL
Sbjct: 524 AGEWRECQGIRGAMRRKGL 542
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 180/591 (30%), Positives = 326/591 (55%), Gaps = 46/591 (7%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG----YCKKGRVIEAREIFDKMPE 130
++++ + V R EE ++ + + ++ ++V+ Y +V A+++FD++ +
Sbjct: 255 SSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTD 314
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
++V++W +M+ GY+K + G ++F+ M G+ + T+ +F AC G +
Sbjct: 315 RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVL 374
Query: 191 HGL-VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
H + D ++ N+++ MY + G ++ A +VF M ++ VSW S+I+GYV G
Sbjct: 375 HSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGL 434
Query: 250 IEEAYRLFERMPGK----DFVSWTTMITGFSSKGNL-----------EKSIE-------- 286
+ A +LF+ M + D + T+++ + GNL E ++E
Sbjct: 435 SDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNA 494
Query: 287 ----------------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+F+ M +KD ++W +I G+ N EA F EM R+ +P+
Sbjct: 495 LTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPD 553
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T++ +L A A+ A L++G +IH + ++ D + N++V +Y KCG +V A +F
Sbjct: 554 GTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFD 613
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
I +++VS+ MI+G+ +G G EA+N F +M+ G+ P++++F+S+L AC+H GL++E
Sbjct: 614 MIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDE 673
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G+ F MK IEP EHYACMVD+L R G+L +A I +M +P +WGALL
Sbjct: 674 GWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGC 733
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H ++ LA+ A+ + ELEP++ YV+L+++Y+ K + ++R K + ++K+PG
Sbjct: 734 RIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPG 793
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
CSWI +K K+++F+AG S K+IE+ L+ + KE + PK ++LL
Sbjct: 794 CSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALL 844
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 209/415 (50%), Gaps = 51/415 (12%)
Query: 87 CEEAARIFEAMVEKDVV-AWGSMVDG---------YCKKGRVIEAREIFDKMPEKNVVAW 136
C E I + + ++ + G M+DG Y K G + E R +FDK+ E + W
Sbjct: 160 CAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLW 219
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
M+ Y + + +LF M G+ NS T + + + R EG QVHGL+ +
Sbjct: 220 NLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICK 279
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
GF+ + NS+I+ Y + A K+F ++ RD +SWNS+ISGYV NG + +
Sbjct: 280 LGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEI 339
Query: 257 FERMP--------------------------GKDFVSWT--------------TMITGFS 276
F +M GK S++ T++ +S
Sbjct: 340 FIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYS 399
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G+L +I +F M EK V+WT++I+G+V + A + F EM + V P+ ++S
Sbjct: 400 KCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTS 459
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L+A A L G +H ++ + N+E++ + N+L +Y+KCG++ DA+ +F+++ +++
Sbjct: 460 ILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKD 519
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++S+N+MI G+ +N L EAL LF +M+ E P+ T +L AC + +++G
Sbjct: 520 VISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKG 573
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 196/408 (48%), Gaps = 43/408 (10%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C R+G +V ++ G D ILG ++ MY + G + E VF +S+
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEK------ 283
WN +IS Y +G E+ LF++M + ++++++ F++ +E+
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 284 -----------------------------SIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
+ +LF+ + ++D ++W ++ISG+V N +
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDR 335
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLV 373
FI+ML V + T+ +V A A TL G +H++ +K ++ +V N+L+
Sbjct: 336 GIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLL 395
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+YSKCG++ A R+F +DE+ +VS+ SMI+G+ + GL + A+ LF +MK G+VP+
Sbjct: 396 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVY 455
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
S+L+AC G ++ G I ++ N+E + D+ + GS+ +A D+ +
Sbjct: 456 AVTSILNACAINGNLKSGKIVHDYIRE-NNLETNSFVSNALTDMYAKCGSMKDAHDVFSH 514
Query: 494 MTFEPPPGVWGALLGA-GRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
M + W ++G + L + L A+ E +PD T +L
Sbjct: 515 MKKKDVIS-WNTMIGGYTKNSLPNEALTLFAEMQRESKPDGTTVACIL 561
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 174/398 (43%), Gaps = 79/398 (19%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIF---------------------------------- 94
RD + N++ISGY+K G + IF
Sbjct: 315 RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVL 374
Query: 95 ------EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
A ++++V +++D Y K G + A +F++M EK VV+WT+M+ GY++
Sbjct: 375 HSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGL 434
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
+ LF M+ G+ + +T + AC + G VH + + + + N+
Sbjct: 435 SDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNA 494
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF---ERMPGKDF 265
+ MY + G M +A+ VFS M K+D +SWN++I GY N EA LF +R D
Sbjct: 495 LTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDG 554
Query: 266 VSWTTMITGFSSKGNLEKSIE-----------------------------------LFNM 290
+ ++ +S L+K E LF+M
Sbjct: 555 TTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDM 614
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+P KD V+WT +I+G+ + EA F +M + P++++ S+L A + + L++G
Sbjct: 615 IPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEG 674
Query: 351 SQIHAHVVK-MNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+I + K +E ++ +V L ++ GN+V A++
Sbjct: 675 WKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHK 712
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 140/280 (50%), Gaps = 13/280 (4%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR-------DSVCSNALI 78
A +F M + VS+ +MITG+VR G+ A +L+ M +R S+ + I
Sbjct: 407 AIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAI 466
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+G LK G+ I E +E + ++ D Y K G + +A ++F M +K+V++W
Sbjct: 467 NGNLKSGKIVHDY-IRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNT 525
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY K + LF M+R + T+ + AC +G ++HG R G
Sbjct: 526 MIGGYTKNSLPNEALTLFAEMQRESKP-DGTTVACILPACASLAALDKGREIHGYALRNG 584
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ D + N+++ MY + G + A +F M+ +D VSW +I+GY +G EA F
Sbjct: 585 YSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFN 644
Query: 259 --RMPG--KDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
RM G D VS+ +++ S G L++ ++FN+M ++
Sbjct: 645 QMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKE 684
>gi|347954468|gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
Length = 788
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 329/596 (55%), Gaps = 23/596 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVC--SNA 76
+A ++F +P RN V++ A++ G+V+ GM EA L +M P R S C ++A
Sbjct: 186 DARKVFDKIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASA 245
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
I G ++ G+ A I + E D + S+++ YCK G V A IFD+M EK+VV W
Sbjct: 246 NIRG-IEEGKQSHAIAIVNGL-EMDNILGTSILNFYCKVGLVEYAEMIFDRMIEKDVVTW 303
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
++ GY++ +D + MR + ++S+TL+ L A R + G +V R
Sbjct: 304 NLLISGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIR 363
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
F+ +I+L ++ + MY + G + +A KVF ++D + WN+L++ Y +G EA RL
Sbjct: 364 HCFESEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYADSGLSGEALRL 423
Query: 257 F-----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFV 307
F E +P + ++W ++I G ++++ E+F M + ++WT +++G V
Sbjct: 424 FYDMQLESVP-PNMITWNSIILSLLRNGQVDEAKEMFLQMQSSGIFPNLISWTTMMNGLV 482
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDV 366
N EEA + +M +RPN +++ LSA A A+LN G IH ++++ + S V
Sbjct: 483 QNGCSEEAINFLRKMQESGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRNLQHSSSV 542
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
S SLV +Y+KCG++ A + F + + YN+MIS +A G +EA+ L+R+++D
Sbjct: 543 SFVTSLVDMYAKCGDINQAEKAFGSKLYDELPLYNAMISAYALYGNMKEAIALYRRLEDM 602
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+ P+ ITF S+LSAC+H G + + F M + + ++P EHY MVD+L +G +
Sbjct: 603 AIKPDSITFTSLLSACSHAGDIVQAINIFTEMVSKHGMKPCLEHYGLMVDLLASSGETNK 662
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A++LI M ++P + +L+ + +L ++ L+E EP+++ YV +S+ +++
Sbjct: 663 ALELIKEMPYKPDARMIQSLVASNNKQHKTELVDYLSKQLLESEPENSGNYVTISNAFAI 722
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK--VHLFLAGRKSCLDLKEIEVTL 600
G + ++R K K ++K PGCSWI +K + VHLF+A K+ + EI+ L
Sbjct: 723 EGSWDEVVKMREMMKAKGLKKKPGCSWIQIKGEXGVHLFVANDKTHIKNDEIQRIL 778
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 216/422 (51%), Gaps = 40/422 (9%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K + A+ +F ++ +NV +W A++ ++ E F+ M G+ ++ +
Sbjct: 77 YAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALTGFVEMIENGVLPDNYVV 136
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ +ACG G VHG + + G + + +S+ MYG+ G +++A KVF + +
Sbjct: 137 PNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYGKCGVLNDARKVFDKIPE 196
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGK-- 263
R+ V+WN+L+ GYV NG EEA RL M GK
Sbjct: 197 RNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANIRGIEEGKQS 256
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D + T+++ + G +E + +F+ M EKD VTW +ISG+V
Sbjct: 257 HAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLISGYVQQGLV 316
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
++A M +++R + +TLS+++SA+A T L G ++ + ++ ES++ + ++
Sbjct: 317 DDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLASTA 376
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V +Y+KCG++VDA ++F + E++++ +N++++ +A +GL EAL LF M+ E + PN
Sbjct: 377 VDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESVPPNM 436
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
IT+ S++ + G V+E F M++ I P + M++ L + G EAI+ +
Sbjct: 437 ITWNSIILSLLRNGQVDEAKEMFLQMQS-SGIFPNLISWTTMMNGLVQNGCSEEAINFLR 495
Query: 493 SM 494
M
Sbjct: 496 KM 497
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 149/569 (26%), Positives = 257/569 (45%), Gaps = 83/569 (14%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCS 74
+I A +F+ + +RN S+AA+I R G+ A +V M P + +VC
Sbjct: 82 AIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALTGFVEMIENGVLPDNYVVPNVCK 141
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+ GR + +A + V S+ D Y K G + +AR++FDK+PE+NVV
Sbjct: 142 ACGALQWTWFGRGVHG-YLVKAGLHDCVFVASSLADMYGKCGVLNDARKVFDKIPERNVV 200
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
AW A++ GY++ E+ L MR+ G+ +T++ A EG Q H +
Sbjct: 201 AWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANIRGIEEGKQSHAIA 260
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
G + D ILG SI+ Y ++G ++ A +F M ++D V+WN LISGYV G +++A
Sbjct: 261 IVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVDDAI 320
Query: 255 RLFERMPGK----DFVSWTTMITGFSSKGNLEKSIE------------------------ 286
+ + M + D V+ +T+++ + NL+ E
Sbjct: 321 HMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLASTAVDMY 380
Query: 287 -----------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+F+ EKD + W +++ + ++ EA R F +M + V PN +T +
Sbjct: 381 AKCGSIVDAKKVFDSTVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESVPPNMITWN 440
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S++ + L G A + + M+S IF
Sbjct: 441 SII-----LSLLRNGQVDEAKEMFLQMQSS---------------------GIFP----- 469
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIY 454
N++S+ +M++G QNG EEA+N RKM++ GL PN + LSAC H+ + G I+
Sbjct: 470 NLISWTTMMNGLVQNGCSEEAINFLRKMQESGLRPNSFSITVALSACAHLASLNFGRSIH 529
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
++ L + +VD+ + G + +A S ++ P ++ A++ A +
Sbjct: 530 GYIIRNLQH-SSSVSFVTSLVDMYAKCGDINQAEKAFGSKLYDELP-LYNAMISAYALYG 587
Query: 515 NLDLAKLAAQHL--MELEPDSATPYVVLS 541
N+ A + L M ++PDS T +LS
Sbjct: 588 NMKEAIALYRRLEDMAIKPDSITFTSLLS 616
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN- 361
+S + + EA R EM ++VR +L L G QIHA ++K
Sbjct: 2 VSSLCKHGEIREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGD 61
Query: 362 -MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ I+ L+ Y+KC + A +F+ + RN+ S+ ++I + GL E AL F
Sbjct: 62 FYARNQYIETKLLIFYAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALTGF 121
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY----ACMVD 476
+M + G++P+ +V AC + + +F Y ++ G + + D
Sbjct: 122 VEMIENGVLPDNYVVPNVCKACGAL-----QWTWFGRGVHGYLVKAGLHDCVFVASSLAD 176
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAGRTHLNLDLAKLAAQHLME-LEPDSA 534
+ G+ G L +A + + + E W AL+ G + +N + +L + E +EP
Sbjct: 177 MYGKCGVLNDARKVFDKIP-ERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRV 235
Query: 535 TPYVVLS 541
T LS
Sbjct: 236 TVSTCLS 242
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 205/664 (30%), Positives = 340/664 (51%), Gaps = 56/664 (8%)
Query: 14 TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------ 64
T L++ C S+ EA +F + + V Y M+ GF + +A + +V M
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVE 132
Query: 65 PARWRDS----VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
P + + VC + L+VG+ E + ++ D+ A + + Y K +V E
Sbjct: 133 PVVYNFTYLLKVCGD---EAELRVGK-EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHE 188
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD+MPE+++V+W +V GY + ++ M + + IT+ + A
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSA 248
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
R G ++HG R GFD + + +++ MY + G + A +F M +R+ VSWNS+
Sbjct: 249 LRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSM 308
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK-------SIEL-- 287
I YV N +EA +F++M + VS + + G+LE+ S+EL
Sbjct: 309 IDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELEL 368
Query: 288 --------------------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
F + + V+W A+I GF N + EA +F +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQ 428
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + V+P+ T SV++A A + + IH V++ ++ +V + +LV +Y+KCG
Sbjct: 429 MQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGA 488
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
++ A IF + ER++ ++N+MI G+ +G+G+ AL LF +M+ + PN +TFLSV+SA
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISA 548
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C+H GLVE G F MK Y+IEP +HY MVD+LGRAG L EA D I M +P
Sbjct: 549 CSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
V+GA+LGA + H N++ A+ A+ L EL P+ +V+L+++Y +VR+
Sbjct: 609 VYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSML 668
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLG 621
+ +RK+PGCS + +K++VH F +G + K+I L+ + KE + +LG
Sbjct: 669 RQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLILG 728
Query: 622 LERD 625
LE D
Sbjct: 729 LEDD 732
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 235/509 (46%), Gaps = 77/509 (15%)
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
+++ + L+S + + G +EAAR+FE + +K V + +M+ G+ K + +A + F +
Sbjct: 66 YQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVR 125
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
M + V + +N T L + CG R G
Sbjct: 126 MRDDEVEP----------------------------VVYN---FTYLLKVCGDEAELRVG 154
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++HGL+ + GF D+ + MY + + EA KVF M +RD VSWN++++GY N
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 248 GEIEEAYRLFERMP--------------------------GKDFVSW------------- 268
G A + M GK+ +
Sbjct: 215 GMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIA 274
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T ++ ++ G+L+ + LF+ M E++ V+W ++I +V NE +EA F +ML + V+
Sbjct: 275 TALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVK 334
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P +++ L A A L +G IH V++ ++ +VS+ NSL+S+Y KC V A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + R IVS+N+MI GFAQNG EALN F +M+ + P+ T++SV++A + +
Sbjct: 395 FGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSIT 454
Query: 449 EEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+I+ M+ ++ +VD+ + G++ A LI M E W A++
Sbjct: 455 HHAKWIHGVVMRNC--LDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMI 511
Query: 508 GAGRTHLNLDLAKLAAQHLMELEPDSATP 536
TH + K A + E++ + P
Sbjct: 512 DGYGTH---GIGKAALELFEEMQKGTIRP 537
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 161/323 (49%), Gaps = 43/323 (13%)
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+L E C R + L+ + G + + +++++ R G +DEA +VF + K
Sbjct: 41 ALLLERCSSLKELR---HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDK 97
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMP--------------------------GK-- 263
+ V + +++ G+ ++++A + F RM GK
Sbjct: 98 KLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D + T + ++ + ++ ++F+ MPE+D V+W I++G+ N
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
A M ++++P+ +T+ SVL A +A + G +IH + ++ +S V+I +L
Sbjct: 218 RMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATAL 277
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V +Y+KCG++ A +F + ERN+VS+NSMI + QN +EA+ +F+KM DEG+ P
Sbjct: 278 VDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTD 337
Query: 433 ITFLSVLSACNHVGLVEEG-FIY 454
++ + L AC +G +E G FI+
Sbjct: 338 VSVMGALHACADLGDLERGRFIH 360
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 165/408 (40%), Positives = 251/408 (61%), Gaps = 1/408 (0%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D++ N+ + R G +D A +F M ++D VSWN+++ GY GE EEA+ LF+RMP
Sbjct: 269 DVVSWNTAMAAMVRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMP 328
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G++ VSW+T+++ + KG++E + +F+ MP K+ VTWT ++S EA R F E
Sbjct: 329 GRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTE 388
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + + + + S+L+A A + L G +IH HV + + + N+L+ ++ KCG
Sbjct: 389 MKEAAIELDVVAVVSILAACAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGC 448
Query: 382 VVDAYRIF-TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
V A IF T I E++ VS+N +I GFA +G GE+ALNLF +MK +G P+ +T ++VLS
Sbjct: 449 VNRADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLS 508
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC H+GLVEEG +F +M+T Y I+P EHY CMVD+LGR G + EA+D+I SM +EP
Sbjct: 509 ACTHMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNE 568
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
+WG+LL A R H N++ A+LAA L L+P +A Y VLS++Y+ GK D + R++
Sbjct: 569 VIWGSLLSACRLHKNVEYAELAANELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQM 628
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
K +K+ G SWI L + H F G + + +I + +S K
Sbjct: 629 KGTGSQKTAGSSWIELDEAFHEFTVGDRKHPESDQISDMIDRLSSHVK 676
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 150/287 (52%), Gaps = 8/287 (2%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA+I A N+ + +A ++F M R+ VS+ + VR+G A ++ MP +
Sbjct: 243 NALIDAYSKND-GLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSMFDEMPEK-- 299
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+V N ++ GY K G EEA +F+ M ++VV+W ++V YCKKG + AR IFDKMP
Sbjct: 300 DTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMP 359
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
KN+V WT MV + + LF M+ + + + + + AC G +
Sbjct: 360 AKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESGCLALGKR 419
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNG 248
+H V + ++ N+++ M+ + G ++ A+ +F + + ++D+VSWN +I G+ +G
Sbjct: 420 IHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGFAMHG 479
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
E+A LF +M + F V+ +++ + G +E+ F M
Sbjct: 480 HGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANM 526
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
++ + N A F++M +R S L + ATA + H HV K+
Sbjct: 178 LLRAYALNSLPHAALAVFVDM---PLRQRDTFTYSFLIKALATAGVTPVRAAHTHVFKLG 234
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
D + N+L+ YSK + DA ++F + R++VS+N+ ++ + G + A ++F
Sbjct: 235 SVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSMFD 294
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
+M ++ + +++ ++L G EE F F+ M
Sbjct: 295 EMPEK----DTVSWNTMLDGYAKAGEAEEAFELFQRM 327
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFAT-MPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
R++ NA++ C + A IF T + +++VS+ +I GF G +A L+
Sbjct: 431 RSTLVCNALMDMFCKCGC-VNRADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKALNLFT 489
Query: 63 NMPAR--WRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKK 115
M + D+V ++S +G EE R F M ++ ++ +G MVD +
Sbjct: 490 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRG 549
Query: 116 GRVIEAREIFDKMP-EKNVVAWTAMVDG 142
G + EA ++ MP E N V W +++
Sbjct: 550 GLIKEAVDMIKSMPWEPNEVIWGSLLSA 577
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 191/588 (32%), Positives = 311/588 (52%), Gaps = 52/588 (8%)
Query: 73 CSNAL-IS---GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
CSNAL IS GYL G+ + A + + + + ++ Y K +A+++F+++
Sbjct: 63 CSNALKISAKKGYLPEGK-QLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEEL 121
Query: 129 PEKNVVAWTAMVDGYM-KVDCFEDG-----FDLFLSMRRGGMAFNSITLTILFEACGRFF 182
P +NVV+W M+ + + D E F F M M + IT L C +F
Sbjct: 122 PVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFN 181
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
GVQ+H + GFD D +G +++ +Y + GF++ A +VF +S RD V WN ++S
Sbjct: 182 DIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVS 241
Query: 243 GYVHNGEIEEAYRLFERMP----------------------------GK----------- 263
YV N EEA+R+F M GK
Sbjct: 242 CYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSF 301
Query: 264 --DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
D + + +I ++ N+ + +F+ M ++ V W +I GF N+ E + E
Sbjct: 302 DSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKE 361
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
MLR+ P++LT+SS++S+ + + + Q+HA VK++ + +S+ NSL+S YSKCG+
Sbjct: 362 MLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGS 421
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ A++ F + ++V++ S+I +A +GL E++ +F KM G+ P++I FL VLSA
Sbjct: 422 ITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSA 481
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C H GLV +G YFK M Y I P EHY C+VD+LGR G + EA +++ SM E
Sbjct: 482 CAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSD 541
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
GA +G+ + H N++LAKLAA+ L +EP+ + Y V+S++++ D R+R +
Sbjct: 542 TLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTME 601
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
KR K PGCSWI + +++H F++ KS + E+ VTL + + KE
Sbjct: 602 DKRDAKVPGCSWIEIGNQIHSFVSNDKSHPNALEMYVTLNMLLRPMKE 649
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 128/295 (43%), Gaps = 47/295 (15%)
Query: 42 AAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM---- 97
A++ + + G A ++ ++ R D V N ++S Y+ EEA R+F +M
Sbjct: 206 CALVGLYAKCGFVENARRVFCDVSCR--DLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDV 263
Query: 98 -------------------------------------VEKDVVAWGSMVDGYCKKGRVIE 120
+ DV+ ++++ Y K +I+
Sbjct: 264 VNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIID 323
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD+M +NVVAW M+ G+ + L M R G + +T++ + +CG
Sbjct: 324 ARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGY 383
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
E +QVH + + + NS+I+ Y + G + A K F + S+ D V+W SL
Sbjct: 384 ASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSL 443
Query: 241 ISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMM 291
I Y +G E++ +FE+M D +++ +++ + G + K + F +M
Sbjct: 444 IYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLM 498
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 329 PNQLTL--SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
PN + L S+ L SA L +G Q+HAH++K +S+QN ++S+Y KC DA
Sbjct: 56 PNTVHLFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAK 115
Query: 387 RIFTNIDERNIVSYNSMI-SGFAQNGLGEEA-----LNLFRKMKDEGLVPNQITFLSVLS 440
++F + RN+VS+N MI + +N E + + FR+M E +VP+ ITF ++
Sbjct: 116 KLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLIC 175
Query: 441 ACNHVGLVEEG 451
C +E G
Sbjct: 176 LCTQFNDIEMG 186
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 30/324 (9%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARW 68
+ALIN + +I +A +F M +RN V++ MI GF G E +L M
Sbjct: 309 SALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFL 368
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVE---KDVVAWG-SMVDGYCKKGRVIEAREI 124
D + +++IS E ++ V+ +D ++ S++ Y K G + A +
Sbjct: 369 PDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKC 428
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F+ + ++V WT+++ Y E ++F M G+ + I + AC
Sbjct: 429 FELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLV 488
Query: 185 REGVQVHGLVSRFGFDYDIILGN----SIITMYGRLGFMDEANKVF-SMMSKRDAVSWNS 239
+G+ L++ Y I+ + ++ + GR G ++EA ++ SM + D+ + +
Sbjct: 489 TKGLHYFKLMTN---AYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGA 545
Query: 240 LISGYVHNGEIE----EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
I + +E A +LF P K V++ M F+S+ + + M +K
Sbjct: 546 FIGSCKLHSNMELAKLAAEKLFLIEPEKS-VNYAVMSNIFASQKHWYDVERIRKTMEDKR 604
Query: 296 D-----VTWTAI---ISGFVNNEQ 311
D +W I I FV+N++
Sbjct: 605 DAKVPGCSWIEIGNQIHSFVSNDK 628
>gi|302760949|ref|XP_002963897.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
gi|300169165|gb|EFJ35768.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
Length = 714
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 318/640 (49%), Gaps = 77/640 (12%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
T+ S+N M+ A N + A F P ++ VS+ M++G+ R G F +A+ + M
Sbjct: 22 TAFSHNVMVAAYAQNG-YLDLAARTFDRTPNKDVVSWNGMLSGYARYGSFRDAKLFFDEM 80
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
P ++++V N LIS + + G EA +F +M +D W ++ GY ++ AREI
Sbjct: 81 P--YKNTVSYNTLISAFARQGNLAEARNLFNSMKIRDAATWNVLIAGYTQRCLCTHAREI 138
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD+ P +NVV W M+ GY + ++ +LF
Sbjct: 139 FDRAPVRNVVTWNTMIGGYAQAGHLDNATELF---------------------------- 170
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
GL+ + ++ + N++I+ GR + +A ++F + RD VSW ++I G
Sbjct: 171 -------GLMPQ----WNEVCWNALISGMGRNRRLPDALELFQALPFRDMVSWIAMIQGC 219
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD-------- 296
VH+G++ A+ LF+RMP D V WT ++T F+ G L+++ +LF+ +P KD
Sbjct: 220 VHSGDLHRAWDLFKRMPLTDVVIWTAIVTAFAHSGFLQEARDLFDAIPIKDAAAVNAMIA 279
Query: 297 ------------------------VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++W A+++ F N +A F M + + P+ +
Sbjct: 280 AYGLHGEIARAKDLFDSAGDLRDVISWNALLAAFSQNGHARQALGIFAGMDLEGIHPDGI 339
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMES---DVSIQNSLVSLYSKCGNVVDAYRIF 389
+ S L A L +G +H ++ + + S+ +LV+ Y+KCG + +A +F
Sbjct: 340 SFVSALDACTILTALREGKLLHEELLLASQGEIFVEASLATALVNFYAKCGRLDEARSLF 399
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ + + NSM+ +AQ+G EA +LF++ G+ P+ +TF+S++SAC+H GL++
Sbjct: 400 DAMAFCDAILLNSMLGAYAQSGRAGEAADLFQRAILSGIHPDAVTFVSMVSACSHAGLLD 459
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G YF S+ + + P HY CMVD+L R G L + DL+++M F+P W +LL
Sbjct: 460 LGHRYFLSLVGDFALAPHAAHYTCMVDLLARTGHLMDGEDLLDAMPFQPEYTAWKSLLAG 519
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
RTH ++ A+ P ++PYV+LS LY GK DG VR +R+RK
Sbjct: 520 CRTHGDVGRGARLARRATNANPVCSSPYVLLSRLYDAAGKHGDGISVRKAMDARRLRKPA 579
Query: 570 GCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
G S I +K + H F+AG K+ ++ I L +++ +E
Sbjct: 580 GLSSITIKGRAHEFVAGGKNHPEISAILDELHSLNAKMRE 619
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 214/492 (43%), Gaps = 86/492 (17%)
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
Y + G +A F+++ + MV Y + G + A FD+ P K+VV+W M+
Sbjct: 2 YGRCGCVADAVICFDSIRNPTAFSHNVMVAAYAQNGYLDLAARTFDRTPNKDVVSWNGML 61
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY + F D F M Y+ V
Sbjct: 62 SGYARYGSFRDAKLFFDEM-----------------------PYKNTVSY---------- 88
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
N++I+ + R G + EA +F+ M RDA +WN LI+GY A +F+R
Sbjct: 89 ------NTLISAFARQGNLAEARNLFNSMKIRDAATWNVLIAGYTQRCLCTHAREIFDRA 142
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
P ++ V+W TMI G++ G+L+ + ELF +MP+ ++V W A+ISG N + +A F
Sbjct: 143 PVRNVVTWNTMIGGYAQAGHLDNATELFGLMPQWNEVCWNALISGMGRNRRLPDALELFQ 202
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+ +D+ ++ +++ + L++ + K +DV I ++V+ ++ G
Sbjct: 203 ALPFRDM----VSWIAMIQGCVHSGDLHRAWDL----FKRMPLTDVVIWTAIVTAFAHSG 254
Query: 381 NVVDAYRIFTNI--------------------------------DERNIVSYNSMISGFA 408
+ +A +F I D R+++S+N++++ F+
Sbjct: 255 FLQEARDLFDAIPIKDAAAVNAMIAAYGLHGEIARAKDLFDSAGDLRDVISWNALLAAFS 314
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
QNG +AL +F M EG+ P+ I+F+S L AC + + EG + + + E
Sbjct: 315 QNGHARQALGIFAGMDLEGIHPDGISFVSALDACTILTALREGKLLHEELLLASQGEIFV 374
Query: 469 EH--YACMVDILGRAGSLAEAIDLINSMTFEPP---PGVWGALLGAGRTHLNLDLAKLAA 523
E +V+ + G L EA L ++M F + GA +GR DL + A
Sbjct: 375 EASLATALVNFYAKCGRLDEARSLFDAMAFCDAILLNSMLGAYAQSGRAGEAADLFQRAI 434
Query: 524 QHLMELEPDSAT 535
L + PD+ T
Sbjct: 435 --LSGIHPDAVT 444
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 17/286 (5%)
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTM 271
MYGR G + +A F + A S N +++ Y NG ++ A R F+R P KD VSW M
Sbjct: 1 MYGRCGCVADAVICFDSIRNPTAFSHNVMVAAYAQNGYLDLAARTFDRTPNKDVVSWNGM 60
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
++G++ G+ + F+ MP K+ V++ +IS F EA F M +D
Sbjct: 61 LSGYARYGSFRDAKLFFDEMPYKNTVSYNTLISAFARQGNLAEARNLFNSMKIRDA---- 116
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T + +++ +I N V N+++ Y++ G++ +A +F
Sbjct: 117 ATWNVLIAGYTQRCLCTHAREIFDRAPVRN----VVTWNTMIGGYAQAGHLDNATELFGL 172
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ + N V +N++ISG +N +AL LF+ + + +++++++ C H G +
Sbjct: 173 MPQWNEVCWNALISGMGRNRRLPDALELFQALP----FRDMVSWIAMIQGCVHSGDLHRA 228
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
+ FK M + + +V +G L EA DL +++ +
Sbjct: 229 WDLFKRMPLTDVVI-----WTAIVTAFAHSGFLQEARDLFDAIPIK 269
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 287/534 (53%), Gaps = 42/534 (7%)
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPE--KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
+ ++++ Y K G V + +F P+ KNVV+WT+++ + F MRR
Sbjct: 65 FNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRS 124
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G+ N T + + AC G Q+H LV + GF ++ + ++++ MY + M A
Sbjct: 125 GVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMA 184
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-----ERMPGKDFVSWTTMITGFSS 277
KVF M R+ VSWN++I G++ N ++A F E + D VS++++ + ++
Sbjct: 185 EKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACAN 244
Query: 278 KGNLE--KSI---------------------------------ELFNMMPEKDDVTWTAI 302
GNLE K + +LF+ +D VTW +
Sbjct: 245 AGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIM 304
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
I +V N YE+A F M RK P++ + SSVL + A A L QG+ IH +++
Sbjct: 305 IMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGF 364
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
++ + +SL+++Y+KCG++VDA++IF ++RN+V + ++I+ Q+G + LF +
Sbjct: 365 VKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQ 424
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
M EG+ P+ ITF+SVLSAC+H G VEEGF YF SM ++ I PG EHYAC+VD+L RAG
Sbjct: 425 MLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAG 484
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L A I M +P VWGALL A R H NL + K A L +LEPD+ YV+L +
Sbjct: 485 ELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCN 544
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
+ + G + + VR K + +RK PGCSWI +K+ ++F KS KEI
Sbjct: 545 ILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEI 598
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 224/528 (42%), Gaps = 97/528 (18%)
Query: 22 SIYEAFEIFATMP--MRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVC 73
S+ + +F++ P +N VS+ ++IT R ++A + +M P + S
Sbjct: 77 SVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAV 136
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+A V + + +++ +V ++VD Y K ++ A ++F++MP +N+
Sbjct: 137 LSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNL 196
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM-AFNSITLTILFEACGRFFRYREGVQVHG 192
V+W M+ G+++ ++ F ++ + A + ++ + +F AC G QVHG
Sbjct: 197 VSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHG 256
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ + G + + NS+ MYG+ G ++ K+FS RD V+WN +I YV+N E+
Sbjct: 257 VALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYED 316
Query: 253 AYRLFERMPGK----DFVSW-----------------------------------TTMIT 273
A F M K D S+ +++IT
Sbjct: 317 ACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLIT 376
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G+L + ++F +++ V WTAII+ + F +MLR+ ++P+ +T
Sbjct: 377 MYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYIT 436
Query: 334 LSSVLSASAATATLNQG-----SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
SVLSA + T + +G S I H + E I V L S+ G + A R
Sbjct: 437 FVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACI----VDLLSRAGELDRAKRF 492
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC-NHVGL 447
+ + P+ + ++LSAC NH L
Sbjct: 493 IELM----------------------------------PIKPDASVWGALLSACRNHSNL 518
Query: 448 VEEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAGSLAEAIDLINSM 494
+ + K L+++EP P +Y + +IL R G L EA ++ M
Sbjct: 519 IMGKEVALK----LFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKM 562
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 170/365 (46%), Gaps = 30/365 (8%)
Query: 12 MITALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVR-----RGMFYEAEELYVN 63
+++AL++ C + A ++F MP+RN VS+ MI GF++ + +F+ L N
Sbjct: 167 VVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLEN 226
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG------SMVDGYCKKGR 117
+ A D V +++ S G E ++ ++ V W S+ D Y K G
Sbjct: 227 LTAL--DEVSFSSVFSACANAGNLEFGKQVHGVALKLGV--WNLVYINNSLSDMYGKCGL 282
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ ++F ++VV W M+ Y+ +ED + F MRR G + + + + +
Sbjct: 283 FNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHS 342
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
C +G +H + R GF ++ + +S+ITMY + G + +A ++F R+ V W
Sbjct: 343 CANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCW 402
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
++I+ +G LFE+M + D++++ ++++ S G +E+ FN M +
Sbjct: 403 TAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIK 462
Query: 294 KDDV-----TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ + I+ + + A R FIE++ ++P+ ++LSA + L
Sbjct: 463 VHGIYPGHEHYACIVDLLSRAGELDRAKR-FIELM--PIKPDASVWGALLSACRNHSNLI 519
Query: 349 QGSQI 353
G ++
Sbjct: 520 MGKEV 524
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI- 392
L+S+ S + T +QIH+ ++ + S + N+L++LY+KCG+V +F++
Sbjct: 30 LTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAP 89
Query: 393 -DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
D +N+VS+ S+I+ + +AL F M+ G+ PN TF +VLSAC
Sbjct: 90 DDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSAC 140
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 181/580 (31%), Positives = 301/580 (51%), Gaps = 45/580 (7%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA 96
+ V+ + +++ + + ++ + P + N L+ Y EA +F A
Sbjct: 55 DPVAASKLLSSYALHRRLPASRGVFASFPNPHATTFLPNTLLRAYALNALPREAVAVFSA 114
Query: 97 MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE----KNVVAWTAMVDGYMKVDCFEDG 152
M +D + ++ G V R + + + ++ A++D Y K F D
Sbjct: 115 MPHRDSFTYSFLIKALSSAG-VAPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDA 173
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
+F M R D++ NS +
Sbjct: 174 SKVFEEMPR---------------------------------------RDVVSWNSAMAA 194
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMI 272
R G ++ A ++F M ++D VSWN+L+ GY G++EEA++LF+ MP ++ VSW+T++
Sbjct: 195 MVRQGEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVV 254
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
+G+ KG++E + +F+ MP K+ VTWT ++S N EEA + F +M V +
Sbjct: 255 SGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVA 314
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF-TN 391
+ S+L+A A + +L G +IH +V + + N+L+ ++ KCG + A +F T
Sbjct: 315 AVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTE 374
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
I E++ VS+N++I GFA +G G++AL+ F +MK +G P+ +T ++VLSAC H+G VEEG
Sbjct: 375 IVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEG 434
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
YF +M+ Y + P EHY CM+D+LGR G + EA+DLI SM ++P +WG+LL A R
Sbjct: 435 RRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLSACR 494
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
H N++ A++A L +L+P +A Y VLS +Y+ GK D + RM+ K +KS G
Sbjct: 495 LHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKSSGS 554
Query: 572 SWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD 611
SWI L + H F G + D +I + +S K+ D
Sbjct: 555 SWIELDEAFHEFTVGDRKHPDSDQISEMVDRLSSHAKDVD 594
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 154/291 (52%), Gaps = 9/291 (3%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA+I A + N +A ++F MP R+ VS+ + + VR+G A ++ M +
Sbjct: 158 NALIDAY-SKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVEGARRMFDEMLEK-- 214
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+V N L+ GY K G EEA ++F+ M E++VV+W ++V GYCKKG + AR IFDKMP
Sbjct: 215 DTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMARVIFDKMP 274
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
KN+V WT MV + E+ LF M+ + + + + AC G +
Sbjct: 275 TKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAACAESGSLALGKR 334
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNG 248
+H V + N++I M+ + G ++ A+ VF + + ++D+VSWN++I G+ +G
Sbjct: 335 IHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDSVSWNTIIGGFAMHG 394
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
++A F +M + F V+ +++ + G +E+ F M E+D
Sbjct: 395 HGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYFANM-ERD 444
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 205/499 (41%), Gaps = 115/499 (23%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMF-YEAEELYVNMPARWRDSVCSNALISGYLK 83
EA +F+ MP R++ +Y+ +I G+ A +V D+ NALI Y K
Sbjct: 107 EAVAVFSAMPHRDSFTYSFLIKALSSAGVAPLRAVHSHVVKLGSIEDTYVGNALIDAYSK 166
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
G +A+++FE M +DVV+W S + ++G V AR +FD+M EK+ V+W ++DGY
Sbjct: 167 NGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVEGARRMFDEMLEKDTVSWNTLLDGY 226
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
K E+ F LF M + ++
Sbjct: 227 TKAGDVEEAFKLFQCMP---------------------------------------ERNV 247
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-- 261
+ +++++ Y + G M+ A +F M ++ V+W ++S NG +EEA +LF +M
Sbjct: 248 VSWSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEA 307
Query: 262 -------------------------------------GKDFVSWTTMITGFSSKGNLEKS 284
G+ +I F G + ++
Sbjct: 308 SVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRA 367
Query: 285 IELFNM-MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+F+ + EKD V+W II GF + ++A +F +M + P+ +T+ +VLSA
Sbjct: 368 DYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTH 427
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+ +G + A NME D Y + I+ Y M
Sbjct: 428 MGFVEEGRRYFA-----NMERD--------------------YGVVPQIEH-----YGCM 457
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I + GL +EA++L + M + PN++ + S+LSAC VE I + L
Sbjct: 458 IDLLGRGGLIKEAVDLIKSMPWD---PNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQP 514
Query: 464 IEPGPEHYACMVDILGRAG 482
G +YA + I AG
Sbjct: 515 SNAG--NYAVLSSIYAEAG 531
>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
Length = 788
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 190/593 (32%), Positives = 321/593 (54%), Gaps = 23/593 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
+A ++F +P RN V++ A++ G+V+ GM EA L +M P R S C +A
Sbjct: 182 DARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASA 241
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G ++ G+ A + + E D + S+++ YCK G V A +FD+M K+VV W
Sbjct: 242 NMGGVEEGKQSHALAVVNGL-ELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDVVTWN 300
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ GY++ ED + MR + F+ +TL+ L R + G +V R
Sbjct: 301 LLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRH 360
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
F+ DI+L ++ + MY + G + +A KVF ++D + WN+L++ Y +G EA RLF
Sbjct: 361 SFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLF 420
Query: 258 -----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVN 308
E +P + ++W +I G ++++ ++F M V+WT +++G V
Sbjct: 421 YEMQLESVP-PNVITWNLIILSLLRNGQVDEAKKMFLQMQSSGIVPTIVSWTTMMNGLVQ 479
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VS 367
N EEA + +M +RPN +++ LSA A A+L+ G +H ++++ + S VS
Sbjct: 480 NGCSEEAIHYLRKMQEYGMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVS 539
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I+ SLV +Y+KCG++ A ++F + YN+MIS +A G EEA+ L+R + D G
Sbjct: 540 IETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAMISAYALYGNVEEAMALYRSLDDMG 599
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ P+ ITF ++LSACNH G + + F M + + ++P EHY MVD+L AG +A
Sbjct: 600 IKPDNITFTNILSACNHAGDINQAIEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKA 659
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ L+ M +EP + +LL +L + ++ L+E EPD++ YV +S+ Y+V
Sbjct: 660 LRLMEEMPYEPDARMIQSLLATCNKEHKTELVEYLSKQLLESEPDNSGNYVTISNAYAVE 719
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILK----DKVHLFLAGRKSCLDLKEI 596
G + ++R K K ++K PGCSWI +K ++V +F+A K+ L EI
Sbjct: 720 GSWDEVVKMREMMKAKGLKKQPGCSWIRVKREEEEEVQVFVANDKTHLRNNEI 772
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 237/484 (48%), Gaps = 45/484 (9%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F K+ +NV +W A++ ++ E F+ M + + ++ + + +ACG
Sbjct: 82 AEVLFSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGA 141
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G VHG V++ G D + + +S+ MYG+ G +D+A KVF + +R+ V+WN+L
Sbjct: 142 LQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNAL 201
Query: 241 ISGYVHNGEIEEAYRLFERM--------------------------PGK----------- 263
+ GYV NG EEA RL M GK
Sbjct: 202 MVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGL 261
Query: 264 --DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
D + T+++ + G +E + +F+ M KD VTW +ISG+V E+A R
Sbjct: 262 ELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKL 321
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + ++ + +TLS+++S +A T G ++ + ++ + ESD+ + ++ V +Y+KCG+
Sbjct: 322 MRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGS 381
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+VDA ++F + +++++ +N++++ +A++GL EAL LF +M+ E + PN IT+ ++ +
Sbjct: 382 IVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILS 441
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT-FEPPP 500
G V+E F M++ I P + M++ L + G EAI + M + P
Sbjct: 442 LLRNGQVDEAKKMFLQMQS-SGIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRP 500
Query: 501 GVWG--ALLGAGRTHLNLDLAKLAAQHLM--ELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
V+ L A +L + +++ L S + L D+Y+ G +V
Sbjct: 501 NVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKV 560
Query: 557 RMKK 560
+K
Sbjct: 561 FRRK 564
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 148/576 (25%), Positives = 254/576 (44%), Gaps = 94/576 (16%)
Query: 21 CSIYEAFEI-FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSV 72
C E E+ F+ + +RN S+AA+I R G+ A +V M P + +V
Sbjct: 76 CDALEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNV 135
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
C + GR + ++ ++ V S+ D Y K G + +AR++FD++PE+N
Sbjct: 136 CKACGALQWRGFGRGVHG-YVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERN 194
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VVAW A++ GY++ E+ L MR G+ +T++ A EG Q H
Sbjct: 195 VVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHA 254
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
L G + D ILG S++ Y ++G ++ A VF M +D V+WN LISGYV G +E+
Sbjct: 255 LAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDVVTWNLLISGYVQQGLVED 314
Query: 253 AYRLFERMP--------------------------GK-------------DFVSWTTMIT 273
A R+ + M GK D V +T +
Sbjct: 315 AIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVD 374
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G++ + ++F+ +KD + W +++ + + EA R F EM + V PN +T
Sbjct: 375 MYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVIT 434
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ ++ + L G A + + M+S +
Sbjct: 435 WNLII-----LSLLRNGQVDEAKKMFLQMQSSGIVP------------------------ 465
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLV 448
IVS+ +M++G QNG EEA++ RKM++ G+ PN + LSAC H G
Sbjct: 466 --TIVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVFSITVALSACANLASLHFGRS 523
Query: 449 EEGFIYFKSM-KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
G+I + + +IE +VD+ + G +++A + F P ++ A++
Sbjct: 524 VHGYIIRNRLHSSSVSIETS------LVDMYAKCGDISKAEKVFRRKLFSELP-LYNAMI 576
Query: 508 GAGRTHLNLDLAKLAAQHL--MELEPDSATPYVVLS 541
A + N++ A + L M ++PD+ T +LS
Sbjct: 577 SAYALYGNVEEAMALYRSLDDMGIKPDNITFTNILS 612
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 6/221 (2%)
Query: 237 WNSLISGYVHNGEIEEAYRLFER-MPGKDFVS-----WTTMITGFSSKGNLEKSIELFNM 290
+ ++ G V+ + ++ R + DF + T ++ ++ LE + LF+
Sbjct: 29 YGEILQGCVYERDFHTGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEIAEVLFSK 88
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+ ++ +W AII E A F+EML+ ++ P+ + +V A A G
Sbjct: 89 LRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWRGFG 148
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
+H +V K ++ V + +SL +Y KCG + DA ++F I ERN+V++N+++ G+ QN
Sbjct: 149 RGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQN 208
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
G+ EEA+ L M++EG+ P ++T + LSA ++G VEEG
Sbjct: 209 GMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEG 249
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 316/587 (53%), Gaps = 43/587 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F +P + MI G+ R +Y+ M A ++ + +L G
Sbjct: 60 ARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLA---SNIKPDRFTFPFLLKG 116
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKG--------RVIE-AREIFDKMPEKNVVAW 136
A + ++ V G + + +K R+++ AR++FD VV W
Sbjct: 117 FTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTW 176
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
M+ GY +V F+ LF+ M + G++ NS+TL ++ AC + G ++ ++
Sbjct: 177 NIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYING 236
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
+ ++IL N +I M+ G E++EA +
Sbjct: 237 GIVERNLILENVLIDMFAACG-------------------------------EMDEAQSV 265
Query: 257 FERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
F+ M +D +SWT+++TGF++ G ++ + + F+ +PE+D V+WTA+I G++ ++ EA
Sbjct: 266 FDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEAL 325
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
F EM +V+P++ T+ S+L+A A L G + ++ K ++++D + N+L+ +Y
Sbjct: 326 ALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMY 385
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
KCGNV A ++F + ++ ++ +MI G A NG GEEAL +F M + + P++IT++
Sbjct: 386 FKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYI 445
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
VL AC H G+VE+G +F SM + I+P HY CMVD+LGRAG L EA ++I +M
Sbjct: 446 GVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPV 505
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
+P VWG+LLGA R H N+ LA++AA+ ++ELEP++ YV+L ++Y+ + + +V
Sbjct: 506 KPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQV 565
Query: 557 RMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
R + I+K+PGCS + L V+ F+AG +S KEI L+ +
Sbjct: 566 RKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENM 612
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 106/216 (49%), Gaps = 1/216 (0%)
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G + + ++F+ +P+ W +I G+ + ++ ML +++P++ T +L
Sbjct: 55 GKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLL 114
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
L G + H VK +S++ +Q + + ++S C V A ++F D +V
Sbjct: 115 KGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVV 174
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++N M+SG+ + +++ LF +M+ G+ PN +T + +LSAC+ + +E G +K +
Sbjct: 175 TWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYI 234
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+E ++D+ G + EA + ++M
Sbjct: 235 NGGI-VERNLILENVLIDMFAACGEMDEAQSVFDNM 269
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 43/260 (16%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
EA +F M R+ +S+ +++TGF G A + + +P RD V A+I GYL++
Sbjct: 261 EAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPE--RDYVSWTAMIDGYLRM 318
Query: 85 GRCEEAARIFEAM---------------------------------------VEKDVVAW 105
R EA +F M ++ D
Sbjct: 319 NRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVG 378
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+++D Y K G V +A+++F +M K+ WTAM+ G E+ +F +M +
Sbjct: 379 NALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASIT 438
Query: 166 FNSITLTILFEACGRFFRYREGVQVH-GLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
+ IT + AC +G + + G ++ ++ + GR G ++EA++
Sbjct: 439 PDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHE 498
Query: 225 VF-SMMSKRDAVSWNSLISG 243
V +M K +++ W SL+
Sbjct: 499 VIVNMPVKPNSIVWGSLLGA 518
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS--KCGNVVDAYRIFTNID 393
S +S ++ Q QIH+H +KM + SD Q +++ + G ++ A ++F I
Sbjct: 9 SPISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
+ + +N+MI G+++ + ++++ M + P++ TF
Sbjct: 69 QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTF 110
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 171/486 (35%), Positives = 275/486 (56%), Gaps = 2/486 (0%)
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFR 183
F +M NV + AM+ G++ ++ M + S T + L +AC
Sbjct: 191 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 250
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G VH + + GF+ + + +++ Y +L + EA KVF M +RDA +W +++S
Sbjct: 251 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSA 310
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
G+++ A +LFE MP ++ +W TMI G++ GN+E + LFN MP KD ++WT +I
Sbjct: 311 LARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMI 370
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
+ + N+QY++A + EM + P+++T+S+V SA A L G +IH +V+ +
Sbjct: 371 TCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLN 430
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
DV I ++LV +Y+KCG++ + IF + ++N+ +N++I G A +G E+AL +F M
Sbjct: 431 LDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIM 490
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
+ E ++PN +TF+S+LSAC H GLV+EG F SM Y+I P HY CMVD+L ++G
Sbjct: 491 EREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGY 550
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
L EA++LI SM FEP +WGALL + H N ++A+ A + LM LEP ++ Y +L +
Sbjct: 551 LNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSM 610
Query: 544 YSVIGKKRDGNRVRMKKKLKRI-RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQT 602
Y+ + +R K K + +K PG SWI L+ +H F A S D +I L
Sbjct: 611 YAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFVLTE 670
Query: 603 ISKGTK 608
+ K
Sbjct: 671 LDGQLK 676
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 187/390 (47%), Gaps = 36/390 (9%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV 102
A++ + + + EA +++ M R D+ A++S +VG + A ++FE M E++
Sbjct: 275 ALVDFYSKLEILSEARKVFDEMCER--DAFAWTAMVSALARVGDMDSARKLFEEMPERNT 332
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
W +M+DGY + G V A +F++MP K++++WT M+ Y + ++D ++ MR
Sbjct: 333 ATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLN 392
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G+ + +T++ + AC G ++H V G + D+ +G++++ MY + G +D +
Sbjct: 393 GIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLS 452
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
+F ++ ++ WN++I G +G E+A R+F M
Sbjct: 453 LLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIM---------------------- 490
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSAS 341
E +MP + VT+ +I+S + +E F+ M R D+RP+ ++
Sbjct: 491 ---EREKIMP--NGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDML 545
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVS---LYSKCGNVVDAYRIFTNIDERNIV 398
+ + LN+ ++ + M E + I +L++ L+ C DA ++ N
Sbjct: 546 SKSGYLNEALEL---IKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSG 602
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
YN ++S +A+ E ++ MK++G+
Sbjct: 603 HYNLLVSMYAEEKDWMEVAHIRSMMKEKGV 632
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+T+N+ + A ++K N D + + +S +V FT ++ N+ YN+MI
Sbjct: 147 STINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMI 206
Query: 405 SGFAQNGLGEEALNLFRKMKDEG-LVPNQITFLSVLSACNHVGLVEEG-----FIYFKSM 458
GF G AL + M +E ++P TF S++ AC + VE G I+ K
Sbjct: 207 KGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGF 266
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
++ ++ +VD + L+EA + + M E W A++ A ++D
Sbjct: 267 ESHLFVQTA------LVDFYSKLEILSEARKVFDEMC-ERDAFAWTAMVSALARVGDMD- 318
Query: 519 AKLAAQHLMELEPDSAT 535
+A+ L E P+ T
Sbjct: 319 ---SARKLFEEMPERNT 332
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 197/607 (32%), Positives = 304/607 (50%), Gaps = 53/607 (8%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN------A 76
I A ++F MP + +SY +I +VR G++++A +++ M + V A
Sbjct: 65 IAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVA 124
Query: 77 LISGYLK---VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+G LK +G RI + D +++ Y GRV AR +FD M ++V
Sbjct: 125 KAAGELKSISLGLVIHG-RILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDV 183
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++W M+ GY + D +F M G+ + T+ + CG G VH L
Sbjct: 184 ISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKL 243
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V I + N+++ MY + G MDEA VF M +RD ++W +I+GY+ +G++E A
Sbjct: 244 VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENA 303
Query: 254 YRLFERMP--------------------------GKDFVSW-------------TTMITG 274
L M GK W T++I+
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISM 363
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ +++ +F+ W+AII+G V NE +A F M R+DV PN TL
Sbjct: 364 YAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATL 423
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+S+L A A A L Q IH ++ K S + LV +YSKCG + A++IF I E
Sbjct: 424 NSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQE 483
Query: 395 ----RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+++V + ++ISG+ +G G AL +F +M G+ PN+ITF S L+AC+H GLVEE
Sbjct: 484 KHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEE 543
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G F M Y HY C+VD+LGRAG L EA +LI ++ FEP +WGALL A
Sbjct: 544 GLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAAC 603
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
TH N+ L ++AA L ELEP++ YV+L+++Y+ +G+ +D +VR + +RK PG
Sbjct: 604 VTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPG 663
Query: 571 CSWIILK 577
S I ++
Sbjct: 664 HSTIEIR 670
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 223/480 (46%), Gaps = 70/480 (14%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF--NSI 169
Y G + AR++FD+MP+ +++++ ++ Y++ + D ++F+ M G+ +
Sbjct: 59 YALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGY 118
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + +A G G+ +HG + R F D + N+++ MY G ++ A VF +M
Sbjct: 119 TYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVM 178
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTM------ITGFSSKG 279
RD +SWN++ISGY NG + +A +F+ M + D + +M + G
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGR 238
Query: 280 NLEKSIE-----------------------------LFNMMPEKDDVTWTAIISGFVNNE 310
N+ K +E +F M +D +TWT +I+G++ +
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDG 298
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
E A M + VRPN +T++S++SA LN G +H ++ + SD+ I+
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIET 358
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SL+S+Y+KC ++ +R+F+ + ++++I+G QN L +AL+LF++M+ E + P
Sbjct: 359 SLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEP 418
Query: 431 NQITFLSVLSACN-----------HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
N T S+L A H L + GF M +L + +V +
Sbjct: 419 NIATLNSLLPAYATLADLRQTMNIHCYLTKTGF-----MSSL-------DAATGLVHVYS 466
Query: 480 RAGSLAEAIDLINSMTFEPPPG---VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+ G+L A + N + + +WGAL+ H + A Q ME+ TP
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD---GHNALQVFMEMVRSGVTP 523
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 116/220 (52%), Gaps = 5/220 (2%)
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVS---WTTMITGFSSKGNLEKSIELFNMMPE 293
+ SL++ Y I + L + VS +T+ ++ G++ + +LF+ MP+
Sbjct: 18 YQSLLNHYAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHIAYARKLFDEMPQ 77
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR--PNQLTLSSVLSASAATATLNQGS 351
+++ +I +V + Y +A FI M+ + ++ P+ T V A+ +++ G
Sbjct: 78 SSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGL 137
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
IH +++ D +QN+L+++Y G V A +F + R+++S+N+MISG+ +NG
Sbjct: 138 VIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNG 197
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+AL +F M +EG+ P+ T +S+L C H+ +E G
Sbjct: 198 YMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMG 237
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L+ AAT ++++ +H HV+ S I ++L Y+ CG++ A ++F + +
Sbjct: 20 SLLNHYAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHIAYARKLFDEMPQS 78
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL--VPNQITFLSVLSACNHVGLVEEGFI 453
+++SYN +I + ++GL +A+N+F +M EG+ VP+ T+ V A + + G +
Sbjct: 79 SLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLV 138
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 196/580 (33%), Positives = 300/580 (51%), Gaps = 62/580 (10%)
Query: 93 IFEAMVEKDVVAWGSMVDGYCK-KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
I ++++ + A G V C V A +F+ + E + ++ Y+ V+
Sbjct: 83 IVSGLLQQPLAA-GRAVKTLCSFPDSVQHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYT 141
Query: 152 GFDLFL-SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ M R +A N T +L + C +G ++H + +FGF+ D+ + NS+I
Sbjct: 142 ALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLI 201
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTT 270
MY G + +A +F + S D V+WNS+I GYV NGEI A LFE MP +D SW +
Sbjct: 202 HMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNS 261
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG------------------------- 305
MI G+ G++ + +LFN MP +D V+W +I G
Sbjct: 262 MIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSW 321
Query: 306 ------FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+V + Y+E R F +M+ + PN+ TL SVL+A A L++G IH++ +K
Sbjct: 322 NIMLALYVRIKDYDECLRMFDKMM-GETMPNEATLVSVLTACAHLGRLDRGKWIHSY-IK 379
Query: 360 MN--MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
N +E DV + +L+++Y+KCG + A +F + R++VS+NSMI G+ +G ++AL
Sbjct: 380 NNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKAL 439
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
+F M+ G +PN TF+ VLSAC H G++ EG+ YF M+ Y IEP EHY CMVD+
Sbjct: 440 EMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDL 499
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGRAG + + +LI M E +WGALL A RTH N +LA++ A+ L+ELEP PY
Sbjct: 500 LGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPY 559
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI----------ILKDKVH------ 581
++LS++Y+ GK D VR K + + K+ G SW+ + K VH
Sbjct: 560 LLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWVHIEEFGTQSFVEKASVHRKSMMY 619
Query: 582 -----LFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHD 616
+ + SC D E+E + T W KHD
Sbjct: 620 SILSDMATQMKLSCGDYDEVENLTEVHPTATY---WVKHD 656
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 205/449 (45%), Gaps = 44/449 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I +A +F + + V++ +MI G+V+ G A EL+ MP R D N++I+GY+
Sbjct: 210 IGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPER--DLFSWNSMIAGYV 267
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
G A +F M +D+V+W M+DGY + + A E+F+ MP +NVV+W M+
Sbjct: 268 GNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLAL 327
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV-SRFGFDY 201
Y+++ +++ +F M M N TL + AC R G +H + + +
Sbjct: 328 YVRIKDYDECLRMFDKMMGETMP-NEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEP 386
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D++L +++TMY + G MD A VF MS R VSWNS+I GY +G+ ++A +F M
Sbjct: 387 DVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDME 446
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+ P +D T+ ++S ++ E + W+ +
Sbjct: 447 KRG---------------------------PMPNDATFICVLSACAHSGMILEGW-WYFD 478
Query: 322 MLRK--DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
++R+ + P ++ + ++ + KM ME ++ +L+S
Sbjct: 479 LMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEEL---IRKMPMEGGTALWGALLSACRTH 535
Query: 380 GNV----VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
N + A R+ ++ R+I Y + + +A G ++ + + MK+ GL
Sbjct: 536 SNSELAEIVAKRLI-ELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFS 594
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
+ VE+ ++ KSM +Y+I
Sbjct: 595 WVHIEEFGTQSFVEKASVHRKSM--MYSI 621
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 147/339 (43%), Gaps = 49/339 (14%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N+MI + N + A ++F MP R+ VS+ MI G+ + A EL
Sbjct: 251 MPERDLFSWNSMIAGYVGNG-DMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACEL 309
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM----------------------- 97
+ MP +R+ V N +++ Y+++ +E R+F+ M
Sbjct: 310 FNWMP--YRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGR 367
Query: 98 ----------------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+E DV+ +++ Y K G + AR++FDKM ++VV+W +M+
Sbjct: 368 LDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIM 427
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR-FGFD 200
GY + ++FL M + G N T + AC EG L+ R + +
Sbjct: 428 GYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIE 487
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLISG-YVH-NGEIEE--AYR 255
+ ++ + GR G M + ++ M + W +L+S H N E+ E A R
Sbjct: 488 PKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKR 547
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
L E P +D + + ++++G + + MM E+
Sbjct: 548 LIELEP-RDIGPYLLLSNIYAAEGKWDDVEIVRKMMKER 585
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/523 (33%), Positives = 287/523 (54%), Gaps = 32/523 (6%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D+ S+V Y G + A +F + K+VV+W +M+ + + +C ED +LFL M
Sbjct: 160 DLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKME 219
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
R + NS+T+ + AC + G V + R G D+ L N+++ MY + G
Sbjct: 220 RENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCG--- 276
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
+++A +LF+ MP +D SWT M+ G++ G+
Sbjct: 277 ----------------------------SVDDAQKLFDEMPERDVFSWTIMLDGYAKMGD 308
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM-LRKDVRPNQLTLSSVLS 339
+ + +FN MP K+ W +IS + N + +EA F E+ L K +P+++TL S LS
Sbjct: 309 YDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLS 368
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A A ++ G IH ++ + + + + +SLV +Y+KCG++ A +F +++ER++
Sbjct: 369 ACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYV 428
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+++MI+G +G G+ A++LF +M++ + PN +TF +VL AC+H GLV+EG ++F M+
Sbjct: 429 WSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEME 488
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
+Y + P +HYACMVDILGRAG L EA++LIN M+ P VWGALLGA H+N++L
Sbjct: 489 PVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELG 548
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
+LA+ L++LEP + V+LS++Y+ G+ + +R + ++K PGCS I
Sbjct: 549 ELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGN 608
Query: 580 VHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGL 622
VH FL G + I L+ I+ K + + LL L
Sbjct: 609 VHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQL 651
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 185/411 (45%), Gaps = 86/411 (20%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGF--MDEANKVFSMMSKRDAVSWNSLISGYVH 246
+VH + R G +D + + T F +D A +F + + + +WN+LI Y
Sbjct: 43 EVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYAS 102
Query: 247 NGEIEEAYRLF-------ERMP---------------------------------GKDFV 266
+ + +++ +F E +P G D
Sbjct: 103 SSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLY 162
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+++ + + G+L + LF + KD V+W ++IS F E+A F++M R++
Sbjct: 163 ILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEREN 222
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
V PN +T+ VLSA A L G + +++ + ++ D+++ N+++ +Y+KCG+V DA
Sbjct: 223 VMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQ 282
Query: 387 RIFTNIDERNIVSYNSMISGFA-------------------------------QNGLGEE 415
++F + ER++ S+ M+ G+A QNG +E
Sbjct: 283 KLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKE 342
Query: 416 ALNLFRKMKDEGLV-PNQITFLSVLSACNHVGLVEEG---FIYFKSMKTLYNIEPGPEHY 471
AL +F +++ + P+++T +S LSAC +G ++ G +Y K + N
Sbjct: 343 ALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHL----I 398
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDL 518
+ +VD+ + GSL +A+++ S+ E VW A++ GR +DL
Sbjct: 399 SSLVDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHGRGKAAIDL 448
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 150/304 (49%), Gaps = 22/304 (7%)
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQ 331
+ SS L+ + LF+ +P+ + TW +I + ++ ++F F+++L K + PN+
Sbjct: 67 SALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNK 126
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T V+ A++ G+ +H +K++ D+ I NSLV Y CG++ A R+F
Sbjct: 127 FTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKG 186
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
I +++VS+NSMIS FAQ E+AL LF KM+ E ++PN +T + VLSAC +E G
Sbjct: 187 ISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFG 246
Query: 452 -----FIYFKSMK---TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
+I K +K TL N M+D+ + GS+ +A L + M E W
Sbjct: 247 RWVCSYIERKGIKVDLTLCN---------AMLDMYTKCGSVDDAQKLFDEMP-ERDVFSW 296
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
+L + D A+L + E + VL Y GK ++ + + +L
Sbjct: 297 TIMLDGYAKMGDYDAARLVFNAMPVKE---IAAWNVLISAYEQNGKPKEALAIFNELQLS 353
Query: 564 RIRK 567
+I K
Sbjct: 354 KIAK 357
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 146/303 (48%), Gaps = 28/303 (9%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+N+MI+A NC +A E+F M N + + + G + A++L + R
Sbjct: 194 SWNSMISAFAQGNCP-EDALELFLKMERENVMPNSVTMVGVLSAC----AKKLDLEF-GR 247
Query: 68 WRDSVCS--------------NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
W VCS NA++ Y K G ++A ++F+ M E+DV +W M+DGY
Sbjct: 248 W---VCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYA 304
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA-FNSITLT 172
K G AR +F+ MP K + AW ++ Y + ++ +F ++ +A + +TL
Sbjct: 305 KMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLV 364
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
AC + G +H + R G + L +S++ MY + G +++A +VF + +R
Sbjct: 365 STLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEER 424
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELF 288
D W+++I+G +G + A LF M + V++T ++ S G +++ F
Sbjct: 425 DVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFF 484
Query: 289 NMM 291
+ M
Sbjct: 485 HEM 487
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 308/602 (51%), Gaps = 48/602 (7%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA---RWRDSVCSNALISGY 81
A ++F + + S+ AMI + G+ Y+A L+V M A RW D+ +I
Sbjct: 74 HARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKAC 133
Query: 82 LKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
E A I V + D S++ Y G + AR +FD M E+ +V+W
Sbjct: 134 GDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWN 193
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
M++GY K C ++ +F M G+ + T+ + C G +VH LV
Sbjct: 194 TMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVK 253
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
DI + NS++ MY + G MDEA +F M KRD VSW ++++GY+ NG+ A L
Sbjct: 254 NLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLC 313
Query: 258 ERMP--------------------------GKDFVSW-------------TTMITGFSSK 278
+ M G+ W T +I ++
Sbjct: 314 QMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKC 373
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
N+ S +F+ ++ W AIISG ++N +A F +ML + V PN TL+S+L
Sbjct: 374 NNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLL 433
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI--DERN 396
A A L Q +H ++++ S + + L+ +YSKCG++ A+ IF I +++
Sbjct: 434 PAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKD 493
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
I++++++I+G+ +G GE A++LF +M G+ PN+ITF S+L AC+H GLV+EG FK
Sbjct: 494 IITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFK 553
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
M + +HY C++D+LGRAG L EA +LI +M F P VWGALLG+ H N+
Sbjct: 554 FMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENV 613
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+L ++AA+ L ELEP + YV+L+++YS +G+ RD VR+ +RK+P S I +
Sbjct: 614 ELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673
Query: 577 KD 578
++
Sbjct: 674 RN 675
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 224/468 (47%), Gaps = 70/468 (14%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
S+ Y G AR++FD++ ++ +W AM+ Y D LF+ M G +
Sbjct: 61 SLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRW 120
Query: 167 -NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
++ T + +ACG + G +H GFD D + NS++ MY G M+ A +V
Sbjct: 121 PDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRV 180
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK---------------------- 263
F +M +R VSWN++I+GY NG ++EA +F+ M GK
Sbjct: 181 FDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKEL 240
Query: 264 -----------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
D W +++ ++ GN++++ +F M ++D V+WT +++G+
Sbjct: 241 EVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGY 300
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+ N A M + V+PN +TL+SVLSA A+ +L G +H ++ +ES+V
Sbjct: 301 ILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEV 360
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
++ +L+ +Y+KC NV ++R+F+ ++ +N++ISG NGL +A+ LF++M E
Sbjct: 361 IVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLME 420
Query: 427 GLVPNQITFLSVLSACN-----------HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
+ PN T S+L A H L+ GF+ + T+ ++
Sbjct: 421 AVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATI------------LI 468
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGV-WGALL------GAGRTHLNL 516
DI + GSL A ++ N + + + W A++ G G T ++L
Sbjct: 469 DIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISL 516
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 234/534 (43%), Gaps = 114/534 (21%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +RT S+N MI N C + EA +F M + +G+ + +
Sbjct: 184 MRERTLVSWNTMINGYFKNGC-VKEALMVFDWM---------------IGKGIEPDCATV 227
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVE-----KDVVAWGSMVDGYCKK 115
+P VCS YLK E R A+VE +D+ W S++D Y K
Sbjct: 228 VSVLP------VCS------YLKE---LEVGRRVHALVEVKNLGEDISVWNSLLDMYAKC 272
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + EA+ IF +M +++VV+WT M++GY+ L M+ + N +TL +
Sbjct: 273 GNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVL 332
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
AC + + G +HG R + ++I+ ++I MY + ++ + +VFS SK+
Sbjct: 333 SACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTA 392
Query: 236 SWNSLISGYVHNGEIEEAYRLFERM----------------PGKDFVS------------ 267
WN++ISG +HNG +A LF++M P F++
Sbjct: 393 PWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYL 452
Query: 268 -----------WTTMITGFSSKGNLEKSIELFNMMPEKDD--VTWTAIISGFVNNEQYEE 314
T +I +S G+LE + +FN +P+KD +TW+AII+G+ + E
Sbjct: 453 IRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGET 512
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F +M++ V+PN++T +S+L A + +++G + +++ N Q SL +
Sbjct: 513 AISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDN-------QMSLRT 565
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+ C V+D + G EEA L R M PN
Sbjct: 566 DHYTC--VIDL---------------------LGRAGRLEEAYELIRTM---AFRPNHAV 599
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE-HYACMVDILGRAGSLAEA 487
+ ++L +C VE G + + K L+ +EPG +Y + +I G +A
Sbjct: 600 WGALLGSCVIHENVELGEV---AAKWLFELEPGNTGNYVLLANIYSAVGRWRDA 650
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 116/220 (52%), Gaps = 2/220 (0%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+++ ++ G + +LF+ + +W A+I + N+ +A F++ML R
Sbjct: 60 SSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRR 119
Query: 329 -PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ T V+ A G+ IHA V +SD +QNSL+++Y CG + A R
Sbjct: 120 WPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARR 179
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + ER +VS+N+MI+G+ +NG +EAL +F M +G+ P+ T +SVL C+++
Sbjct: 180 VFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+E G ++ + N+ + ++D+ + G++ EA
Sbjct: 240 LEVGR-RVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEA 278
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDV---SIQNSLVSLYSKCGNVVDAYRIFTNI 392
S+L + ++ QIHAH + + + S + +SL + Y+ CG A ++F +
Sbjct: 23 SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDEL 82
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHVGLVEEG 451
++ S+N+MI + +GL +AL LF +M G P+ T+ V+ AC L E G
Sbjct: 83 RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 193/642 (30%), Positives = 322/642 (50%), Gaps = 47/642 (7%)
Query: 30 FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEE 89
F +P ++ ++ +MI+ +V G F+EA + + G +
Sbjct: 174 FDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD 233
Query: 90 AARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
RI F+ + +V S++ Y + G AR +FD MP +++ +W AM+ G ++
Sbjct: 234 GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
D+ MR G+ N +T+ + C + + +H V + G ++D+ +
Sbjct: 294 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFV 353
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----- 260
N++I MY + G +++A K F M D VSWNS+I+ Y N + A+ F +M
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGF 413
Query: 261 -PG----------------------------------KDFVSWTTMITGFSSKGNLEKSI 285
P +D V ++ ++ G L+ +
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAAT 344
++F ++ KD ++W +I+G+ N EA + M K++ PNQ T S+L A A
Sbjct: 474 KVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 533
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L QG +IH V+K N+ DV + L+ +Y KCG +VDA +F + + + V++N++I
Sbjct: 534 GALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAII 593
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
S +G E+ L LF +M DEG+ P+ +TF+S+LSAC+H G VEEG F+ M+ Y I
Sbjct: 594 SCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGI 652
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
+P +HY CMVD+LGRAG L A I M +P +WGALLGA R H N++L K A+
Sbjct: 653 KPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASD 712
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
L E++ + YV+LS++Y+ +GK ++VR + + ++K+PG S I + KV +F
Sbjct: 713 RLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFY 772
Query: 585 AGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
G +S KEI L+ ++ K + P + + L +E D
Sbjct: 773 TGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEED 814
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 259/535 (48%), Gaps = 56/535 (10%)
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
+C A + V+ ++ +V+ Y G V +R FD++P+K+V W +M+ Y+
Sbjct: 135 AKCLHALLVVAGKVQSIFIS-TRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193
Query: 145 KVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
F + F + + + T + +ACG +G ++H + GF +++
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRRIHCWAFKLGFQWNV 250
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE--RMP 261
+ S+I MY R GF A +F M RD SWN++ISG + NG +A + + R+
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310
Query: 262 G--KDFVSWTT-----------------------------------MITGFSSKGNLEKS 284
G +FV+ + +I ++ GNLE +
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+ F M D V+W +II+ + N+ A +F++M +P+ LTL S+ S A +
Sbjct: 371 RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430
Query: 345 ATLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+H +++ + DV I N++V +Y+K G + A+++F I ++++S+N++
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTL 490
Query: 404 ISGFAQNGLGEEALNLFRKMKD-EGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTL 461
I+G+AQNGL EA+ +++ M++ + ++PNQ T++S+L A HVG +++G I+ + +KT
Sbjct: 491 ITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKT- 549
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD-LAK 520
N+ C++D+ G+ G L +A+ L + E W A++ H + + K
Sbjct: 550 -NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAEKTLK 607
Query: 521 LAAQHLME-LEPDSATPYVVLSDLYSVIGKKRDGN---RVRMKKKLKRIRKSPGC 571
L + L E ++PD T +V L S G +G R+ + +K K GC
Sbjct: 608 LFGEMLDEGVKPDHVT-FVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC 661
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 188/412 (45%), Gaps = 55/412 (13%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F MP R+ S+ AMI+G ++ G +A ++ M R + + L V
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEM--RLEGIKMNFVTVVSILPV- 325
Query: 86 RCEEAARIFEAM----------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
C + I AM +E D+ ++++ Y K G + +AR+ F +M +VV+
Sbjct: 326 -CPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVS 384
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W +++ Y + D F+ M+ G + +TL L + + VHG +
Sbjct: 385 WNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIM 444
Query: 196 RFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG---EIE 251
R G+ D+++GN+++ MY +LG +D A+KVF ++ +D +SWN+LI+GY NG E
Sbjct: 445 RRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAI 504
Query: 252 EAYRLFE-----------------------------RMPGK--------DFVSWTTMITG 274
E Y++ E R+ G+ D T +I
Sbjct: 505 EVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDV 564
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ G L ++ LF +P++ VTW AIIS + E+ + F EML + V+P+ +T
Sbjct: 565 YGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF 624
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
S+LSA + + + +G + + ++ + +V L + G + AY
Sbjct: 625 VSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAY 676
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 192/618 (31%), Positives = 318/618 (51%), Gaps = 56/618 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F +P + + + +I+ F RG+ EA LY ++ AR ++ ++ G
Sbjct: 85 AQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH-NSVFLTVAKACG 143
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCK--------KGRVIE-AREIFDKMPEKNVVAW 136
+A+R+ E V D + G M D + K + +E AR +FD + K+VV+W
Sbjct: 144 ASGDASRVKE--VHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSW 201
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
T+M Y+ G +F M G+ NS+TL+ + AC + G +HG R
Sbjct: 202 TSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVR 261
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
G ++ + ++++++Y R +++A +
Sbjct: 262 HGMIENVFVCSALVSLYARCL-------------------------------SVKQARLV 290
Query: 257 FERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVNNEQY 312
F+ MP +D VSW ++T + + +K + LF+ M K D+ TW A+I G + N Q
Sbjct: 291 FDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQT 350
Query: 313 EEAFRWFIEMLRK----DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
E+A +EMLRK +PNQ+T+SS L A + +L G ++H +V + + D++
Sbjct: 351 EKA----VEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTT 406
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
+LV +Y+KCG++ + +F I +++V++N+MI A +G G E L LF M G+
Sbjct: 407 MTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGI 466
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
PN +TF VLS C+H LVEEG F SM + +EP HYACMVD+ RAG L EA
Sbjct: 467 KPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAY 526
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
+ I M EP WGALLGA R + N++LAK++A L E+EP++ YV L ++
Sbjct: 527 EFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAK 586
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+ + R+ K + I K+PGCSW+ + D+VH F+ G K+ ++ +I L + + K
Sbjct: 587 LWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMK 646
Query: 609 EFDW-PKHDWSLLGLERD 625
+ P D+ L ++++
Sbjct: 647 SAGYKPDTDYVLQDIDQE 664
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%)
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G+ ++ +LF+ +P+ D T + +IS F EA R + + + ++P+ +V
Sbjct: 80 GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A A+ ++ ++H ++ M SD + N+L+ Y KC V A R+F ++ +++V
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
S+ SM S + GL L +F +M G+ PN +T S+L AC+ + ++ G
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSG 252
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 183/473 (38%), Gaps = 100/473 (21%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALIS 79
S+ +A +F MP R+ VS+ ++T + + + L+ M ++ D NA+I
Sbjct: 283 SVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIG 342
Query: 80 GYLKVGRCEEAARIFEAM---------------------------------------VEK 100
G ++ G+ E+A + M +
Sbjct: 343 GCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIG 402
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D+ ++V Y K G + +R +FD + K+VVAW M+ + LF SM
Sbjct: 403 DLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESML 462
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+ G+ NS+T T + C EG+Q+ + G D+
Sbjct: 463 QSGIKPNSVTFTGVLSGCSHSRLVEEGLQI---FNSMGRDH------------------- 500
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS-WTTMITGFSSKG 279
+ + DA + ++ + G + EAY +RMP + S W ++
Sbjct: 501 --------LVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYK 552
Query: 280 NLE----KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
N+E + +LF + P + ++ + V + + EA I M + +
Sbjct: 553 NVELAKISANKLFEIEPNNPG-NYVSLFNILVTAKLWSEASEARILMKERGI-------- 603
Query: 336 SVLSASAATATLNQGSQIHAHVV--KMNMESDVSIQNSLVSLYSK---CGNVVDAYRIFT 390
+ + + L G ++H VV K NMESD I N L L K G D +
Sbjct: 604 ---TKTPGCSWLQVGDRVHTFVVGDKNNMESD-KIYNFLDELGEKMKSAGYKPDTDYVLQ 659
Query: 391 NIDE----RNIVSYNSMIS-GFAQNGL-GEEALNLFRKMKDEGLVPNQITFLS 437
+ID+ ++ S++ ++ F L G+ ++ +F+ ++ G N I ++S
Sbjct: 660 DIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVS 712
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 184/571 (32%), Positives = 303/571 (53%), Gaps = 52/571 (9%)
Query: 64 MPARWRDSVCSNALISGYLK----VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR-- 117
MP R V + +L + ++ G E A K + ++ GY + R
Sbjct: 1 MPRHLRLGVGARSLATAAIRRGDLAGAAEPEAVASTTPQRKTTADYNRLLAGYARAARPG 60
Query: 118 ------VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
+ +AR +FD++P + V++ ++ + DLF +M
Sbjct: 61 GRRDRLLADARHLFDRIPRPDAVSYNTLLSCHFAAGDVRGARDLFAAM------------ 108
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
A R ++ N++++ R G + EA VF M
Sbjct: 109 ----PATAR---------------------NVTSWNTMLSGLSRSGAVGEARAVFLAMPA 143
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD-FVSWTTMITGFSSKGNLEKSIELFNM 290
R+++SWN+++S + H G++ A FE P K+ V WT M++G+ G++EK+++ F
Sbjct: 144 RNSISWNAMVSCFAHAGDMCAAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEA 203
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQ 349
MP + V+W A+++G+V N + E+A F M+R DVRPN+ TLSSVL + + L
Sbjct: 204 MPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGF 263
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G Q+H K+ + V+ SLVS+Y KCG++ A ++F+ + R+++++N+MISG+A
Sbjct: 264 GRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAH 323
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+G G EA+ LF KMK +G+ PN ITF++VL+AC H G+ + G F+ M+ +Y IE +
Sbjct: 324 HGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVD 383
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
HY+CMVD+L RAGSL A+ LI SM F+P P +G LL A R + N++ A+ AA L+E
Sbjct: 384 HYSCMVDLLCRAGSLERAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQ 443
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
P +A YV L+++Y+V + D +RVR K + K+PG SW+ + +H+F + +
Sbjct: 444 NPQNAGAYVQLANIYAVANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRL 503
Query: 590 CLDLKEIEVTLQTISKGTKEFDW-PKHDWSL 619
L I L + + K + P D++L
Sbjct: 504 HPQLSLIHERLCQLEERMKAMGYVPDLDFAL 534
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 156/296 (52%), Gaps = 11/296 (3%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPM--RNAVSYAAMITGFVRRGMFYEAEELYVN 63
+ SYN +++ + A ++FA MP RN S+ M++G R G EA +++
Sbjct: 82 AVSYNTLLSCHFAAG-DVRGARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLA 140
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKD-VVAWGSMVDGYCKKGRVIEAR 122
MPAR +S+ NA++S + G A FE +K+ V W +MV GY G V +A
Sbjct: 141 MPAR--NSISWNAMVSCFAHAGDMCAAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAM 198
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRF 181
+ F+ MP +++V+W A+V GY+K ED +F +M R + N TL+ + C
Sbjct: 199 QFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNL 258
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
G QVH ++ + G S+++MY + G +D A K+FS M RD ++WN++I
Sbjct: 259 SALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMI 318
Query: 242 SGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
SGY H+G+ EA LFE+M + +++++ ++T G + ++ F M E
Sbjct: 319 SGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQE 374
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 14 TALINNNCSIYE---AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
T+L++ C + A ++F+ M +R+ +++ AMI+G+ G EA EL+ M ++ +
Sbjct: 284 TSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVE 343
Query: 71 S--VCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEARE 123
+ A+++ + G C+ + FE M +E V + MVD C+ G + A
Sbjct: 344 PNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVS 403
Query: 124 IFDKMP 129
+ MP
Sbjct: 404 LIRSMP 409
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 175/525 (33%), Positives = 290/525 (55%), Gaps = 7/525 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y V AR++FD++PE+NV+ M+ Y+ + +G +F +M + +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + +AC G ++HG ++ G + +GN +++MYG+ GF+ EA V
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFS--SKGNL 281
MS+RD VSWNSL+ GY N ++A + M D + +++ S + N+
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
++F M +K V+W +I ++ N EA + M P+ ++++SVL A
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
T+ L+ G +IH ++ + + ++ ++N+L+ +Y+KCG + A +F N+ R++VS+
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MIS + +G G +A+ LF K++D GLVP+ I F++ L+AC+H GL+EEG FK M
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I P EH ACMVD+LGRAG + EA I M+ EP VWGALLGA R H + D+ L
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA L +L P+ + YV+LS++Y+ G+ + +R K K ++K+PG S + + +H
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
FL G +S EI L + K KE + P + +L +E +
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEE 604
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 165/401 (41%), Gaps = 86/401 (21%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------------PARWRD 70
+ A ++F +P RN + MI +V G + E +++ M P +
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 71 SVCS-------------------------NALISGYLKVGRCEEAARIFEAMVEKDVVAW 105
CS N L+S Y K G EA + + M +DVV+W
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 209
Query: 106 GSMVDGYCKKGRVIEAREI-------------------------------------FDKM 128
S+V GY + R +A E+ F KM
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKM 269
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+K++V+W M+ YMK + +L+ M G +++++T + ACG G
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++HG + R +++L N++I MY + G +++A VF M RD VSW ++IS Y +G
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Query: 249 EIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----W 299
+A LF ++ D +++ T + S G LE+ F +M + +T
Sbjct: 390 RGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL 449
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
++ + +EA+R+ +M + PN+ ++L A
Sbjct: 450 ACMVDLLGRAGKVKEAYRFIQDM---SMEPNERVWGALLGA 487
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+E+ +K + L VL TL +H+ ++ ++ + S+ L+ Y+
Sbjct: 31 LELDQKSPQETVFLLGQVLDTYPDIRTLRT---VHSRIILEDLRCNSSLGVKLMRAYASL 87
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+V A ++F I ERN++ N MI + NG E + +F M + P+ TF VL
Sbjct: 88 KDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 440 SACNHVGLV 448
AC+ G +
Sbjct: 148 KACSCSGTI 156
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 164/430 (38%), Gaps = 65/430 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M ++ S+N MI + N + EA E+++ M +AVS +++
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPV-EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 57 AEEL--YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+++ Y+ + + NALI Y K G E+A +FE M +DVV+W +M+ Y
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
GR +A +F K+ + G+ +SI
Sbjct: 388 SGRGCDAVALFSKLQD-------------------------------SGLVPDSIAFVTT 416
Query: 175 FEACGRFFRYREGVQVHGLVS-RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KR 232
AC EG L++ + + ++ + GR G + EA + MS +
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476
Query: 233 DAVSWNSLISG-YVHNGE---IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
+ W +L+ VH+ + A +LF+ P + + + ++ G E+ +
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY-YVLLSNIYAKAGRWEEVTNIR 535
Query: 289 NMM--------PEKDDVTWTAIISGFV----NNEQYEEAFRWFIEMLRKD-----VRPNQ 331
N+M P +V II F+ ++ Q +E +R +++K V ++
Sbjct: 536 NIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSE 595
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK---CGNVVDAYRI 388
L V T ++ MN + + N+ + + CG+ A ++
Sbjct: 596 SALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKL 655
Query: 389 FTNIDERNIV 398
+ I R I+
Sbjct: 656 ISQITSREII 665
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 281/522 (53%), Gaps = 44/522 (8%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++D Y K G++ A E+FD MPE+NVV+WTA++ G++ + LF MR G +
Sbjct: 44 NLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSP 103
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
N TL+ +ACG R GVQ+HG+ R GF+ ++ NS++ MY + + +A +VF
Sbjct: 104 NEFTLSATLKACGGG--TRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVF 161
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVSWTTMITGFSSKG-- 279
++ R+ +WNS+ISGY H G+ ++ +F M + D ++ +++ S G
Sbjct: 162 DVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAA 221
Query: 280 -----------------------------------NLEKSIELFNMMPEKDDVTWTAIIS 304
L ++++F+ + ++ + WT +I
Sbjct: 222 REGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIV 281
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G Q +EA F VR + LSSV++ A A + QG Q+H + K
Sbjct: 282 GHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL 341
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
DVS+ NSLV +Y KCG +A R F + RN+VS+ +MI+G ++G G EA++LF +M+
Sbjct: 342 DVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQ 401
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
EG+ +++ +L++LSAC+H GLV+E YF + + P EHYACMVD+LGRAG L
Sbjct: 402 AEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGEL 461
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA +LI SM EP GVW LL A R H ++ + + L+ ++ D+ YV+LS++
Sbjct: 462 REAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNIL 521
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ G+ R+ +R + K +RK GCSW + +VH F G
Sbjct: 522 AEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGG 563
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 157/318 (49%), Gaps = 40/318 (12%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L A R R GVQ+H + + GF D +L N++I MY + G + A +VF M +R+
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVSWTTMI---------------- 272
VSW +L+ G++H+GE E RLF M G +F T+
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVC 129
Query: 273 --TGFSSKGNLEKSI--------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
TGF + S+ +F+++P ++ TW ++ISG+ + Q ++
Sbjct: 130 VRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSL 189
Query: 317 RWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHA--HVVKMNMESDVSIQNSLV 373
F EM R+ D +P++ T +S+L A + +G+Q+HA V ++ S+ + +L+
Sbjct: 190 LVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALL 249
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y KC + A ++F ++ RN + + ++I G AQ G +EA+ LFR+ G+ +
Sbjct: 250 DVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGH 309
Query: 434 TFLSVLSACNHVGLVEEG 451
SV++ LVE+G
Sbjct: 310 VLSSVVAVFADFALVEQG 327
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 7/200 (3%)
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G D + +I ++ G L + E+F+ MPE++ V+WTA++ GF+++ + E R F E
Sbjct: 36 GSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGE 95
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M PN+ TLS+ L A G QIH V+ E + NSLV +YSK
Sbjct: 96 MRGSGTSPNEFTLSATLKACGGGT--RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRW 153
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK---DEGLVPNQITFLSV 438
DA R+F I RN+ ++NSMISG+A G G ++L +FR+M+ DE P++ TF S+
Sbjct: 154 TGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDE--QPDEFTFASL 211
Query: 439 LSACNHVGLVEEGFIYFKSM 458
L AC+ +G EG +M
Sbjct: 212 LKACSGLGAAREGAQVHAAM 231
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 184/438 (42%), Gaps = 67/438 (15%)
Query: 16 LINNN-------CS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--- 64
++NNN C ++ A E+F MP RN VS+ A++ GF+ G E L+ M
Sbjct: 40 MLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGS 99
Query: 65 ---PARWRDS----VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
P + S C +G G C FE DVVA S+V Y K
Sbjct: 100 GTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTG--FEG---HDVVA-NSLVVMYSKGRW 153
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFE 176
+AR +FD +P +N+ W +M+ GY D +F M RR + T L +
Sbjct: 154 TGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLK 213
Query: 177 ACGRFFRYREGVQVHGLVSRFGFD--YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
AC REG QVH ++ G + IL +++ +Y + + A +VF + +R+A
Sbjct: 214 ACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNA 273
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDFVSW 268
+ W ++I G+ G+++EA LF R GK +
Sbjct: 274 IQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCY 333
Query: 269 T-------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
T +++ + G ++ F MP ++ V+WTA+I+G + EA
Sbjct: 334 TAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREA 393
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVS 374
F EM + V +++ ++LSA + + +++ + + + + M +V
Sbjct: 394 IDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVD 453
Query: 375 LYSKCGNVVDAYRIFTNI 392
L + G + +A + ++
Sbjct: 454 LLGRAGELREAKELILSM 471
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 67/110 (60%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
++ +L ASA ++L G Q+HA ++K+ SD + N+L+ +Y+KCG + A +F +
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
ERN+VS+ +++ GF +G E L LF +M+ G PN+ T + L AC
Sbjct: 67 ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG 116
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 181/439 (41%), Gaps = 77/439 (17%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMR-----NAVSYAAMITGFVRRGMFYEAE 58
R A++N+MI+ + ++ +F M R + ++A+++ G E
Sbjct: 167 RNLATWNSMISGYAHAG-QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGA 225
Query: 59 ELYVNMPARWRDSVCSNALISG-----YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+++ M R S SNA+++G Y+K R A ++F+ + ++ + W +++ G+
Sbjct: 226 QVHAAMAVRG-VSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHA 284
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
++G+V EA +F + W++ V R G +S+
Sbjct: 285 QEGQVKEAMCLFRRF-------WSSGV-------------------RADGHVLSSVVAVF 318
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
F +G QVH ++ D+ + NS++ MY + G EA + F M R+
Sbjct: 319 -----ADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARN 373
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
VSW ++I+G +G EA LFE M + E
Sbjct: 374 VVSWTAMINGVGKHGHGREAIDLFEEMQAEGV---------------------------E 406
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQ 352
D+V + A++S ++ +E R+F + + + +RP + ++ L + +
Sbjct: 407 ADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKE 466
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVV---DAYRIFTNIDERNIVSYNSMISGFAQ 409
+ ++ M ME V + +L+S +V + + +D N V+Y + + A+
Sbjct: 467 L---ILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAE 523
Query: 410 NGLGEEALNLFRKMKDEGL 428
G E + M+ +GL
Sbjct: 524 AGEWRECQGIRGAMRRKGL 542
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 291/538 (54%), Gaps = 28/538 (5%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA--MVDGYMKVDC 148
A++ + + + A +V Y + +R +FD + + + A+ A M+ Y
Sbjct: 373 AQVLKQGLHLNPRAAARLVSAYALLRLLPSSRRVFDAIRDPHADAFLANTMLRAYALGGA 432
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ----VHGLVSRFGFDYDII 204
D F +M R +S T + L +A GV VH V + G D
Sbjct: 433 PRDALAAFSAMPR----RDSFTYSFLIKALSA-----AGVAPVRAVHSHVVKLGSVEDTF 483
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
+GN++I Y + G +A KVF M +RD VSWN+ ++ V GE+ A +LF+ MP KD
Sbjct: 484 VGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKLFDEMPEKD 543
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA--------- 315
VSW T++ G++ G +E + ELF MPE++ V+W+ ++SG+ E A
Sbjct: 544 TVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPG 603
Query: 316 ---FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
W I M V + + S+L+A A + +L+ G +IH +V K N+ + N+L
Sbjct: 604 KNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNAL 663
Query: 373 VSLYSKCGNVVDAYRIF-TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+ ++ KCG V A +F T +++ VS+NS+I GFA +G G++AL LF +MK +G P+
Sbjct: 664 IDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPD 723
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
+T ++VLSAC H+G V+EG YF +M+ Y I P EHY CM+D+LGR G + EA+DLI
Sbjct: 724 AVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLI 783
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
SM +EP +WG+LL A R H N++ A++A L +L+P +A Y VLS++Y+ G+
Sbjct: 784 KSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWS 843
Query: 552 DGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
D + RM+ K +K+ G SW+ L + H F G + D +I + +S K
Sbjct: 844 DMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVKH 901
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 148/291 (50%), Gaps = 28/291 (9%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA+I A + N +A ++F MP R+ VS+ + VR G A +L+ MP +
Sbjct: 486 NALIDAY-SKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKLFDEMPEK-- 542
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+V N ++ GY K G E A +F+ M E++VV+W +MV GYCKKG + AR IFDKMP
Sbjct: 543 DTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMP 602
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
KN+V WT M M+ + + + + AC G +
Sbjct: 603 GKNLVTWTIM-------------------MKEASVELDVAAVVSILAACAESGSLSLGKR 643
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNG 248
+H V + + N++I M+ + G ++ A+ VF + ++D+VSWNS+I G+ +G
Sbjct: 644 IHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHG 703
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
++A LF +M + F V+ +++ + G +++ F+ M E+D
Sbjct: 704 HGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNM-ERD 753
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/486 (35%), Positives = 275/486 (56%), Gaps = 2/486 (0%)
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFR 183
F +M NV + AM+ G++ ++ M + S T + L +AC
Sbjct: 94 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 153
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G VH + + GF+ + + +++ Y +L + EA KVF M +RDA +W +++S
Sbjct: 154 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSA 213
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
G+++ A +LFE MP ++ +W TMI G++ GN+E + LFN MP KD ++WT +I
Sbjct: 214 LARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMI 273
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
+ + N+QY++A + EM + P+++T+S+V SA A L G +IH +V+ +
Sbjct: 274 TCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLN 333
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
DV I ++LV +Y+KCG++ + IF + ++N+ +N++I G A +G E+AL +F M
Sbjct: 334 LDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIM 393
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
+ E ++PN +TF+S+LSAC H GLV+EG F SM Y+I P HY CMVD+L ++G
Sbjct: 394 EREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGY 453
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
L EA++LI SM FEP +WGALL + H N ++A+ A + LM LEP ++ Y +L +
Sbjct: 454 LNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSM 513
Query: 544 YSVIGKKRDGNRVRMKKKLKRI-RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQT 602
Y+ + +R K K + +K PG SWI L+ +H F A S D +I L
Sbjct: 514 YAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFILTE 573
Query: 603 ISKGTK 608
+ K
Sbjct: 574 LDGQLK 579
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 187/390 (47%), Gaps = 36/390 (9%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV 102
A++ + + + EA +++ M R D+ A++S +VG + A ++FE M E++
Sbjct: 178 ALVDFYSKLEILSEARKVFDEMCER--DAFAWTAMLSALARVGDMDSARKLFEEMPERNT 235
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
W +M+DGY + G V A +F++MP K++++WT M+ Y + ++D ++ MR
Sbjct: 236 ATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLN 295
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G+ + +T++ + AC G ++H V G + D+ +G++++ MY + G +D +
Sbjct: 296 GIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLS 355
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
+F ++ ++ WN++I G +G E+A R+F M
Sbjct: 356 LLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIM---------------------- 393
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSAS 341
E +MP + VT+ +I+S + +E F+ M R D+RP+ ++
Sbjct: 394 ---EREKIMP--NGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDML 448
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVS---LYSKCGNVVDAYRIFTNIDERNIV 398
+ + LN+ ++ + M E + I +L++ L+ C DA ++ N
Sbjct: 449 SKSGYLNEALEL---IKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSG 505
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
YN ++S +A+ E ++ MK++G+
Sbjct: 506 HYNLLVSMYAEEKDWMEVAHIRSMMKEKGV 535
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+T+N+ + A ++K N D + + +S +V FT ++ N+ YN+MI
Sbjct: 50 STINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMI 109
Query: 405 SGFAQNGLGEEALNLFRKMKDEG-LVPNQITFLSVLSACNHVGLVEEG-----FIYFKSM 458
GF G AL + M +E ++P TF S++ AC + VE G I+ K
Sbjct: 110 KGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGF 169
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
++ ++ +VD + L+EA + + M E W A+L A ++D
Sbjct: 170 ESHLFVQTA------LVDFYSKLEILSEARKVFDEMC-ERDAFAWTAMLSALARVGDMD- 221
Query: 519 AKLAAQHLMELEPDSAT 535
+A+ L E P+ T
Sbjct: 222 ---SARKLFEEMPERNT 235
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/617 (29%), Positives = 314/617 (50%), Gaps = 71/617 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRR-------GM 53
M +R+ SY M+ AL+ S+ +A E++ P+ + + AMI GFV G+
Sbjct: 174 MPERSVVSYTTMVDALMKRG-SVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGV 232
Query: 54 FYEAEELYVN-----------------------------MPARWRDSVCS--NALISGYL 82
F+E V+ M + D N+LI+ YL
Sbjct: 233 FHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYL 292
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ G + A R+F+ M +DVV+W +++D Y + G + AR + D+MPE+N V+W +V
Sbjct: 293 RKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVAR 352
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + ++ L+ M G N + + AC R G ++H + +
Sbjct: 353 HEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNN 412
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ + +++I MY + ++ +A +F +P
Sbjct: 413 VFVSSALIDMYCKCK-------------------------------QLPDAQMIFYSLPQ 441
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K+ V W ++I+G+S+ + ++ ELF MP ++ +W +IISG+ N Q+ +A + F M
Sbjct: 442 KNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAM 501
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L P ++T SSVL A A+ +L G +HA ++K+ ++ + + +L +Y+K G++
Sbjct: 502 LASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDL 561
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ R+F + +RN V++ +MI G A+NG EE++ LF M G+ PN+ TFL++L AC
Sbjct: 562 DSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFAC 621
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVE YF+ M+ I P +HY CMVD+L RAG LAEA DL+ + +
Sbjct: 622 SHSGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANS 680
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W ALL A + N ++ + AA+ L EL+ D+ YV+LS++Y+ GK +D +R+ K
Sbjct: 681 WAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKG 740
Query: 563 KRIRKSPGCSWIILKDK 579
++K GCSW+ ++D+
Sbjct: 741 INLKKDGGCSWVQIRDE 757
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 199/407 (48%), Gaps = 63/407 (15%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
++ ++K G A R+F+ M E+ VV++ +MVD K+G V +A E++ + P +V +
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
TAM+ G++ + +D +F M G++ N ITL + +AC + + + GL +
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMK 273
Query: 197 FG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
D ++ + NS+IT+Y R G D A ++F M RD VSW +L+ Y G++E A R
Sbjct: 274 SNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARR 333
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+ + MP ++ VSW T++ KGN ++++ L++
Sbjct: 334 VLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYS-------------------------- 367
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+ML RPN SSVL A A+ L G +IH +KM ++V + ++L+ +
Sbjct: 368 -----QMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDM 422
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK----------- 424
Y KC + DA IF ++ ++NIV +NS+ISG++ N EA LF+KM
Sbjct: 423 YCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSII 482
Query: 425 --------------------DEGLVPNQITFLSVLSACNHVGLVEEG 451
G P +ITF SVL AC + +E G
Sbjct: 483 SGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG 529
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 142/291 (48%), Gaps = 38/291 (13%)
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF----SMMSKRDAVSWNSLISG 243
+ H LVS G D + + ++T Y + + F S++ +++ ++
Sbjct: 100 IHAHALVS--GLTADGSVASHLLTAYAAFARAADRDGAFRDCVSVVGAASPFAYDFMVRE 157
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
+V G+I A RLF+ MP + VS+TTM+ +G++ ++EL+ P +TA+I
Sbjct: 158 HVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMI 217
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN-M 362
+GFV NE ++A F EML V PN++TL SV+ A + I +K N +
Sbjct: 218 AGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLL 277
Query: 363 ESDVSIQNSLVSLYSKCGN---------------------VVDAY----------RIFTN 391
+ ++ ++NSL++LY + G+ ++D Y R+
Sbjct: 278 DKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDE 337
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ ERN VS+ ++++ Q G +EA++L+ +M +G PN F SVL AC
Sbjct: 338 MPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGAC 388
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 297/552 (53%), Gaps = 49/552 (8%)
Query: 107 SMVDGYCKKGRVIEAREIF-DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
S+++ Y K ++ A IF D E NV A+ A++ G++ E+GF+ + MR G+
Sbjct: 77 SLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVI 136
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ T +AC + ++HGL+ +FG + D+ +G++++ Y + G M+ A
Sbjct: 137 PDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVA 193
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG----FSSKGNL 281
F + RD V WN++++GY G+ E F RM + V +TG F+ G+L
Sbjct: 194 FEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDL 253
Query: 282 -----------------------------------EKSIELFNMMPEKDDVTWTAIISGF 306
E ++E+F MM EKD +W +I+S
Sbjct: 254 NNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVH 313
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD- 365
++ R ML ++P+ +T+++VL A + A L G +IH +++ + D
Sbjct: 314 EQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDG 373
Query: 366 -----VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
V ++N+++ +Y+KCG++ DA+ +F + +++ S+N MI G+ +G G EAL +F
Sbjct: 374 KDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMF 433
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M + L P+++TF+ VLSAC+H G V +G + MK+ Y++ P EHY C++D+LGR
Sbjct: 434 SRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGR 493
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA +L +M E P VW ALL A R H + LA++AAQ + ELEP+ YV++
Sbjct: 494 AGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLM 553
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S++Y +G+ + VR + + +RK+PGCSWI LK+ VH+F++ ++ + I L
Sbjct: 554 SNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGL 613
Query: 601 QTISKGTKEFDW 612
+++ +E +
Sbjct: 614 NSLTARLREHGY 625
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 132/541 (24%), Positives = 229/541 (42%), Gaps = 101/541 (18%)
Query: 13 ITALIN--NNCSIYE-AFEIFATMPMR--NAVSYAAMITGFVRRGMFYEAEELYVNM--P 65
IT+LIN + C+ A IF+ P N ++ A+I+GF+ G E E Y M
Sbjct: 75 ITSLINMYSKCNQMNFALSIFSD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNE 133
Query: 66 ARWRDSVCSNALISGYLKVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
D I L V ++ +F+ +E DV ++V+ Y K G + A+
Sbjct: 134 GVIPDKFTFPCAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVA 193
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F+++P ++VV W AMV+GY ++ FE + F M + + T+T +
Sbjct: 194 FEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDL 253
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
G +HG + G+D + + NS+I MYG+ +++A ++F MM ++D SWNS++S +
Sbjct: 254 NNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVH 313
Query: 245 VHNGEIEEAYRLFERMPG----KDFVSWTTMITG-------------------------- 274
G+ + RL +RM G D V+ TT++
Sbjct: 314 EQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDG 373
Query: 275 ---------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
++ G++ + +F M KD +W +I G+ + EA F
Sbjct: 374 KDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMF 433
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
M ++P+++T VLSA + ++QG +N LV + SK
Sbjct: 434 SRMCEVQLKPDEVTFVGVLSACSHAGFVSQG------------------RNFLVQMKSK- 474
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
Y + I+ Y +I + G +EA L M E N + + ++L
Sbjct: 475 ------YDVAPTIEH-----YTCVIDMLGRAGQLDEAYELALTMPIEA---NPVVWRALL 520
Query: 440 SAC---NHVGLVEEGFIYFKSMKTLYNIEPGPEH---YACMVDILGRAGSLAEAIDLINS 493
+AC H L E + + ++ +E PEH Y M ++ G G E +++ ++
Sbjct: 521 AACRLHKHAVLAE------VAAQRVFELE--PEHCGSYVLMSNVYGAVGRYEEVLEVRHT 572
Query: 494 M 494
M
Sbjct: 573 M 573
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 37/323 (11%)
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+N T +A +G ++H + GF + S+I MY + M+ A +
Sbjct: 35 YNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSI 94
Query: 226 FSMMSKR-DAVSWNSLISGYVHNGEIEEAYRLFERM------PGK--------------- 263
FS + + ++N++ISG++ NG EE + +++M P K
Sbjct: 95 FSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLE 154
Query: 264 ---------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
D + ++ + G +E + F +P +D V W A+++G+
Sbjct: 155 IKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 214
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
Q+E F M + V P++ T++ VLS A LN G IH +KM +S V++
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAV 274
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
NSL+ +Y KC + DA IF + E++I S+NS++S Q G + L L +M G+
Sbjct: 275 SNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGI 334
Query: 429 VPNQITFLSVLSACNHVGLVEEG 451
P+ +T +VL AC+H+ + G
Sbjct: 335 QPDLVTVTTVLPACSHLAALMHG 357
>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
Length = 806
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 325/597 (54%), Gaps = 24/597 (4%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVC--SNA 76
+A ++F +P RN V++ A++ G+V+ GM EA L +M P R S C ++A
Sbjct: 201 DARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASA 260
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+ G + G+ A + + E D + S+++ YCK G + A +FD+M K+VV W
Sbjct: 261 NMCG-VGEGKQSHAVAVVNGL-EMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKDVVTW 318
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
++ GY++ ED + MR + F+ +TL+ L A R + G +V R
Sbjct: 319 NLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIR 378
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
F+ DI L +++I MY + G + +A +VF ++D + WN+L++ Y +G EA RL
Sbjct: 379 HSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGEALRL 438
Query: 257 F-----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV----TWTAIISGFV 307
F E +P + ++W +I G ++++ E+F M V +WT +++G V
Sbjct: 439 FYEMQLESVP-PNAITWNLIILSLFRNGQVDEAKEMFLQMQSSGIVPTLVSWTTMMNGLV 497
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-V 366
N EEA + +M +RPN +++ LSA A A+L+ G +H ++++ + S V
Sbjct: 498 QNGCSEEAVHYLRKMQESGLRPNVFSITVALSACANLASLHLGRSVHGYIIRNQLHSSSV 557
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
SI+ +L+ +Y+KCG++ A ++F + +N+MIS +A +G +EA++L+R ++D
Sbjct: 558 SIETALIDMYAKCGDISKAEKVFKRKSYSELPLFNAMISAYALSGNVKEAIDLYRSLEDM 617
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G+ P+ ITF +VLSACNH G + + F M + + +EP EHY MVD+L AG +
Sbjct: 618 GIKPDNITFTNVLSACNHAGDINQAIEIFSDMVSKHGMEPCLEHYGLMVDLLASAGETEK 677
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A+ L+ M ++P + +LL +L ++ L+E EPD++ YV +S+ Y+
Sbjct: 678 ALRLMEEMPYKPDARMIQSLLVTCNEEHKTELVDYLSRQLLESEPDNSGNYVTISNAYAG 737
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILK---DKVHLFLAGRKSCLDLKEIEVTL 600
G + ++R K K ++K PGCSWI +K ++VH+F+A K+ L EI L
Sbjct: 738 EGSWDEVVKMREMMKDKGLKKKPGCSWIQIKGXXEEVHVFVANDKTHLRNNEIRRML 794
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 150/612 (24%), Positives = 275/612 (44%), Gaps = 88/612 (14%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAE---- 58
D+ Y +++L N I EA + M RN V I G + +G YE +
Sbjct: 6 DQPRNPYFHRVSSLCKNG-EIREALSLVTEMDFRN-VRIGPEIYGEILQGCVYERDFHTG 63
Query: 59 -----ELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+ N ++ L+ Y K E A +F + ++V +W +++ C
Sbjct: 64 RQIHARILKNGEFYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVKC 123
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
+ G + E ++ + M +K + F D F +
Sbjct: 124 RVG-----------LAEGALMGFVEM----LKDEIFPDNF----------------VVPN 152
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYD-IILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ +ACG G +HG V++ G D + + +S+ MYG+ G +D+A KVF + +R
Sbjct: 153 VCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMYGKCGVLDDARKVFDEIPER 212
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGK--- 263
+ V+WN+L+ GYV NG EEA RL M GK
Sbjct: 213 NVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMCGVGEGKQSH 272
Query: 264 ----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
D + T+++ + G +E + +F+ M KD VTW +ISG+V E
Sbjct: 273 AVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYVQQGLVE 332
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+A R M + ++ + +TLS+++SA+A T G ++ + ++ + ESD+ + ++++
Sbjct: 333 DAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLASTVI 392
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y+KCG++VDA R+F + +++++ +N++++ +A++GL EAL LF +M+ E + PN I
Sbjct: 393 DMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNAI 452
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
T+ ++ + G V+E F M++ I P + M++ L + G EA+ +
Sbjct: 453 TWNLIILSLFRNGQVDEAKEMFLQMQS-SGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRK 511
Query: 494 MT---FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM--ELEPDSATPYVVLSDLYSVIG 548
M P L A +L L + +++ +L S + L D+Y+ G
Sbjct: 512 MQESGLRPNVFSITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCG 571
Query: 549 KKRDGNRVRMKK 560
+V +K
Sbjct: 572 DISKAEKVFKRK 583
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 147/582 (25%), Positives = 253/582 (43%), Gaps = 105/582 (18%)
Query: 21 CSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSV 72
C +E E +F+ + +RN S+AA+I R G+ A +V M P + +V
Sbjct: 94 CDAHEIAETLFSKLRVRNVFSWAAIIGVKCRVGLAEGALMGFVEMLKDEIFPDNFVVPNV 153
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
C + GR + V S+ D Y K G + +AR++FD++PE+N
Sbjct: 154 CKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMYGKCGVLDDARKVFDEIPERN 213
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VVAW A++ GY++ E+ L MR G+ +T++ A EG Q H
Sbjct: 214 VVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMCGVGEGKQSHA 273
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ G + D ILG S++ Y ++G ++ A VF M +D V+WN LISGYV G +E+
Sbjct: 274 VAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYVQQGLVED 333
Query: 253 AYRLFERMP--------------------------GKDFVSW-------------TTMIT 273
A R+ + M GK+ + +T+I
Sbjct: 334 AIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLASTVID 393
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G++ + +F+ +KD + W +++ + + EA R F EM + V PN +T
Sbjct: 394 MYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNAIT 453
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ + ++SL+ G V +A +F +
Sbjct: 454 WNLI----------------------------------ILSLFRN-GQVDEAKEMFLQMQ 478
Query: 394 ERNI----VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----H 444
I VS+ +M++G QNG EEA++ RKM++ GL PN + LSAC H
Sbjct: 479 SSGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKMQESGLRPNVFSITVALSACANLASLH 538
Query: 445 VGLVEEGFIYFKSM-KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
+G G+I + + +IE ++D+ + G +++A + ++ P ++
Sbjct: 539 LGRSVHGYIIRNQLHSSSVSIETA------LIDMYAKCGDISKAEKVFKRKSYSELP-LF 591
Query: 504 GALLGA----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
A++ A G +DL + + M ++PD+ T VLS
Sbjct: 592 NAMISAYALSGNVKEAIDLYR--SLEDMGIKPDNITFTNVLS 631
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 297/552 (53%), Gaps = 49/552 (8%)
Query: 107 SMVDGYCKKGRVIEAREIF-DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
S+++ Y K ++ A IF D E NV A+ A++ G++ E+GF+ + MR G+
Sbjct: 77 SLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVI 136
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ T +AC + ++HGL+ +FG + D+ +G++++ Y + G M+ A
Sbjct: 137 PDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVA 193
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG----FSSKGNL 281
F + RD V WN++++GY G+ E F RM + V +TG F+ G+L
Sbjct: 194 FEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDL 253
Query: 282 -----------------------------------EKSIELFNMMPEKDDVTWTAIISGF 306
E ++E+F MM EKD +W +I+S
Sbjct: 254 NNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVH 313
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD- 365
++ R ML ++P+ +T+++VL A + A L G +IH +++ + D
Sbjct: 314 EQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDG 373
Query: 366 -----VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
V ++N+++ +Y+KCG++ DA+ +F + +++ S+N MI G+ +G G EAL +F
Sbjct: 374 KDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMF 433
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M + L P+++TF+ VLSAC+H G V +G + MK+ Y++ P EHY C++D+LGR
Sbjct: 434 SRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGR 493
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA +L +M E P VW ALL A R H + LA++AAQ + ELEP+ YV++
Sbjct: 494 AGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLM 553
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S++Y +G+ + VR + + +RK+PGCSWI LK+ VH+F++ ++ + I L
Sbjct: 554 SNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGL 613
Query: 601 QTISKGTKEFDW 612
+++ +E +
Sbjct: 614 NSLTARLREHGY 625
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/538 (24%), Positives = 229/538 (42%), Gaps = 95/538 (17%)
Query: 13 ITALIN--NNCSIYE-AFEIFATMPMR--NAVSYAAMITGFVRRGMFYEAEELYVNM--P 65
IT+LIN + C+ A IF+ P N ++ A+I+GF+ G E E Y M
Sbjct: 75 ITSLINMYSKCNQMNFALSIFSD-PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNE 133
Query: 66 ARWRDSVCSNALISGYLKVGRCEE-AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
D I L V ++ +F+ +E DV ++V+ Y K G + A+
Sbjct: 134 GVIPDKFTFPCAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVA 193
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F+++P ++VV W AMV+GY ++ FE + F M + + T+T +
Sbjct: 194 FEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDL 253
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
G +HG + G+D + + NS+I MYG+ +++A ++F MM ++D SWNS++S +
Sbjct: 254 NNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVH 313
Query: 245 VHNGEIEEAYRLFERMPG----KDFVSWTTMITG-------------------------- 274
G+ + RL +RM G D V+ TT++
Sbjct: 314 EQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDG 373
Query: 275 ---------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
++ G++ + +F M KD +W +I G+ + EA F
Sbjct: 374 KDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMF 433
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
M ++P+++T VLSA + ++QG +N LV + SK
Sbjct: 434 SRMCEVQLKPDEVTFVGVLSACSHAGFVSQG------------------RNFLVQMKSK- 474
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
Y + I+ Y +I + G +EA L M E N + + ++L
Sbjct: 475 ------YDVAPTIEH-----YTCVIDMLGRAGQLDEAYELALTMPIEA---NPVVWRALL 520
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEH---YACMVDILGRAGSLAEAIDLINSM 494
+AC L + + + + ++ +E PEH Y M ++ G G E +++ ++M
Sbjct: 521 AACR---LHKHAVLAEVAAQRVFELE--PEHCGSYVLMSNVYGAVGRYEEVLEVRHTM 573
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 37/323 (11%)
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+N T +A +G ++H + GF + S+I MY + M+ A +
Sbjct: 35 YNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSI 94
Query: 226 FSMMSKR-DAVSWNSLISGYVHNGEIEEAYRLFERM------PGK--------------- 263
FS + + ++N++ISG++ NG EE + +++M P K
Sbjct: 95 FSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLE 154
Query: 264 ---------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
D + ++ + G +E + F +P +D V W A+++G+
Sbjct: 155 IKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 214
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
Q+E F M + V P++ T++ VLS A LN G IH +KM +S V++
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAV 274
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
NSL+ +Y KC + DA IF + E++I S+NS++S Q G + L L +M G+
Sbjct: 275 SNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGI 334
Query: 429 VPNQITFLSVLSACNHVGLVEEG 451
P+ +T +VL AC+H+ + G
Sbjct: 335 QPDLVTVTTVLPACSHLAALMHG 357
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/508 (33%), Positives = 283/508 (55%), Gaps = 40/508 (7%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G I AR++FD+MPE+NVV+WTA + GY K ++D +F M R G+ N T
Sbjct: 82 YVKFGETINARKVFDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTY 141
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ AC G+Q+HG + + F ++ + ++++ ++ + G M++A +F MS+
Sbjct: 142 GSVLRACTGLRCLERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSE 201
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIE- 286
RD VSWN++I GY ++++R+F M G+ D + +++ S NL K +
Sbjct: 202 RDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQI 261
Query: 287 ----------------------------------LFNMMPEKDDVTWTAIISGFVNNEQY 312
L+ M +KD +++TAI++G+ Y
Sbjct: 262 HGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSY 321
Query: 313 -EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
EA F +M + + +T ++L+ A A+L+ G QIHA +K DV+ N+
Sbjct: 322 SREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNA 381
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
LV +Y+K G + DA R F + E+N++S+ S+I+G+ ++G G EA+ L++KM+ EGL PN
Sbjct: 382 LVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPN 441
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
ITFLS+L AC+H GL EG+ F +M T YNI P EHY+CM+D+ R G L EA ++I
Sbjct: 442 DITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMI 501
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
M +P +WGA+LGA + ++ L ++AA HL+ ++P+++ YVVL+ +Y+ G
Sbjct: 502 CKMNIKPNSSLWGAILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWD 561
Query: 552 DGNRVRMKKKLKRIRKSPGCSWIILKDK 579
R+R + + ++K PG S I +K
Sbjct: 562 KACRMRNLMEYRSLKKIPGYSIIQSTNK 589
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/529 (23%), Positives = 226/529 (42%), Gaps = 89/529 (16%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP RN VS+ A I+G+ + G + +A ++ M R V +N G +
Sbjct: 91 ARKVFDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMG---RAGVRANQFTYGSVLRA 147
Query: 86 ----RCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
RC E ++K ++ ++VD + K G + +AR +F+ M E++VV+W
Sbjct: 148 CTGLRCLERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSW 207
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
A++ GY D +D F +F SM G+ + TL + +A R + Q+HG++ +
Sbjct: 208 NAVIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQ 267
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI-EEAYR 255
GF I L S+I Y + M A+ ++ M K+D +S+ ++++GY EA
Sbjct: 268 LGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALD 327
Query: 256 LFERM---------------------------------------PGKDFVSWTTMITGFS 276
LF+ M P D + ++ ++
Sbjct: 328 LFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYA 387
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G +E + F M EK+ ++WT++I+G+ + EA + +M + ++PN +T S
Sbjct: 388 KSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLS 447
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L A + + +G + N++ Y I +
Sbjct: 448 LLFACSHSGLTGEGWECF-------------------------NNMITKYNILPRAEH-- 480
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
Y+ MI FA+ G EEA N+ KM + PN + ++L AC+ G + G +
Sbjct: 481 ---YSCMIDLFARGGQLEEAYNMICKMN---IKPNSSLWGAILGACSIYGHMSLGEV--- 531
Query: 457 SMKTLYNIEP-GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWG 504
+ L ++P +Y + I +GS +A + N M + + G
Sbjct: 532 AATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSLKKIPG 580
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 166/347 (47%), Gaps = 49/347 (14%)
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
++G +H + R GFD ++ L +I Y + G A KVF M +R+ VSW + ISGY
Sbjct: 54 KQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQISGY 113
Query: 245 VHNGEIEEAYRLFERMP----------------------------------------GKD 264
NG ++A +F +M G
Sbjct: 114 AKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRFIGNL 173
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
FV + ++ S GN+E + LF M E+D V+W A+I G+ + +++FR F M+
Sbjct: 174 FVQ-SALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMG 232
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ V P+ TL SVL AS+ L + QIH ++++ S + + SL+ Y+K +
Sbjct: 233 EGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKS 292
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQN-GLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A ++ ++ +++++S+ ++++G+A+ EAL+LF+ M+ + + +TF ++L+ C
Sbjct: 293 ASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCA 352
Query: 444 HVGLVEEG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ + G K Y++ G +VD+ ++G + +A
Sbjct: 353 DIASLSIGRQIHALAIKYKPSYDVATGNA----LVDMYAKSGEIEDA 395
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 2/173 (1%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L T L QG IH+H+++ +S++ + L+ Y K G ++A ++F + ERN
Sbjct: 43 ILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERN 102
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+VS+ + ISG+A+NG ++AL +F +M G+ NQ T+ SVL AC + +E G
Sbjct: 103 VVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHG 162
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
++ I A +VD+ + G++ +A L +M+ E W A++G
Sbjct: 163 CIQKNRFIGNLFVQSA-LVDLHSKCGNMEDARYLFETMS-ERDVVSWNAVIGG 213
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/586 (31%), Positives = 303/586 (51%), Gaps = 71/586 (12%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N LI+ Y K+G A +F+ M + + +W +M+ Y K G + +EIF MP ++ V
Sbjct: 44 NNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGV 103
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGG-MAFNSITLTILFEACGRFFRYREGVQVHGL 193
+W +++ GY+ + + SM + G + N IT + + G Q+HG
Sbjct: 104 SWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQ 163
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM------------------------- 228
+ +FGF + +G+S++ MY ++G + A++VF
Sbjct: 164 IVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDS 223
Query: 229 ------MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSK 278
M +RD++SW ++I+G + NG EA LF M + D ++ +++T
Sbjct: 224 KRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGL 283
Query: 279 GNLEKSIEL-----------------------------------FNMMPEKDDVTWTAII 303
L++ E+ F M K+ V+WTA++
Sbjct: 284 RALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAML 343
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
G+ N EEA R F +M R + P+ TL SV+S+ A A+L +G+Q H + +
Sbjct: 344 VGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLI 403
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
S +++ N+L++LY KCG++ D+ ++F + R+ VS+ +++SG+AQ G E ++LF +M
Sbjct: 404 SFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERM 463
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
+GL P+ +TF++VLSAC+ GLVE G YF+SM + I P +HY CM+D+ GRAG
Sbjct: 464 LVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGR 523
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
L EA + IN M F P W LL + R + N ++ K AA+ L+EL+P + Y++LS +
Sbjct: 524 LEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSI 583
Query: 544 YSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
Y+ GK + ++R + K RK PG SWI K KV++F A +S
Sbjct: 584 YAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQS 629
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 228/485 (47%), Gaps = 71/485 (14%)
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK---VDCF 149
I +++ + + ++++ Y K G + AR +FDKMP+ N +W M+ Y K +
Sbjct: 31 IIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTM 90
Query: 150 EDGFDLFLS-----------------------------MRRGGMAFNSITLTILFEACGR 180
++ F + + M+ G + N IT + +
Sbjct: 91 QEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSS 150
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G Q+HG + +FGF + +G+S++ MY ++G + A++VF + +R+ V +N++
Sbjct: 151 QGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTM 210
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+G + +G ++++ RLF M +D +SWTTMIT
Sbjct: 211 ITGLLRSGMVKDSKRLFHGMKERDSISWTTMIT--------------------------- 243
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
G + N EA F +M ++ + +Q T SVL+A L +G +IH +++
Sbjct: 244 ----GLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRS 299
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+V + ++LV +Y KC +V A +F + +N+VS+ +M+ G+ QNG EEA+ +F
Sbjct: 300 GYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVF 359
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
M+ G+ P+ T SV+S+C ++ +EEG F + + ++ + G+
Sbjct: 360 CDMQRNGIEPDDFTLGSVISSCANLASLEEG-AQFHCQALVSGLISFITVSNALITLYGK 418
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPDSATP 536
GS+ ++ L + M+F W AL+ G+ + +DL + L+PD+ T
Sbjct: 419 CGSIEDSNQLFDEMSFRDEVS-WTALVSGYAQFGKANETIDL--FERMLVQGLKPDAVTF 475
Query: 537 YVVLS 541
VLS
Sbjct: 476 IAVLS 480
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 182/389 (46%), Gaps = 71/389 (18%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++H L+ + + + L N++I Y +LG + A VF M + ++ SWN+++S Y +G
Sbjct: 26 KLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSG 85
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
++ +F MP +D VSW ++I+G+ G++ ++++ +N M KD V
Sbjct: 86 DLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMM-KDGV----------- 133
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
+ N++T S++L ++ ++ G QIH +VK + V +
Sbjct: 134 ------------------LNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFV 175
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN--------------------------- 401
+SLV +Y+K G V A ++F + ERN+V YN
Sbjct: 176 GSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDS 235
Query: 402 ----SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
+MI+G QNGL EA++LFR M+ EG+ +Q TF SVL+AC + ++EG K
Sbjct: 236 ISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEG----KE 291
Query: 458 MKTLYNIEPGPEHY----ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+ TL I G H + +VD+ + S+ A + M + L+G G+
Sbjct: 292 IHTLI-IRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNG 350
Query: 514 LNLDLAKL-AAQHLMELEPDSATPYVVLS 541
+ + ++ +EPD T V+S
Sbjct: 351 FSEEAVRVFCDMQRNGIEPDDFTLGSVIS 379
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
T Q ++H ++K + + N+L++ YSK GN+ A +F + + N S+N+M
Sbjct: 18 TRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTM 77
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQ--ITFLSVLSACNHVGLVEEGFIYFKSM 458
+S ++++G +F ++PN+ +++ S++S G V E + SM
Sbjct: 78 LSAYSKSGDLSTMQEIF------SIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSM 128
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 197/645 (30%), Positives = 340/645 (52%), Gaps = 58/645 (8%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
+++I N C I +A +F MP ++ V + M+ GFV+ G A +++ +M
Sbjct: 11 SSLIKLYAENGC-IEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQT 69
Query: 70 D----------SVCSNALIS--GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
S+C++ +S G G F+ +V +VA Y K G+
Sbjct: 70 KPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAM------YSKFGQ 123
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ +A ++F+ MP+ NVV W M+ G+++ ++ LF M G++ +SIT +
Sbjct: 124 LSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPS 183
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
++G ++HG + R G D+ L +++I +Y + + A K+F + D V
Sbjct: 184 VTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVC 243
Query: 238 NSLISGYVHNGEIEEAYRLF-----ERMP---------------------GKDFVS---- 267
++ISGYV NG +A +F E+M GK+ +
Sbjct: 244 TAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILK 303
Query: 268 ---------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+ ++ ++ G L+ + ++F MPEKD V W AII+ N + +EA
Sbjct: 304 HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDL 363
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F +M R+ + + +++S+ LSA A L+ G IH+ ++K +S+V +++L+ +Y K
Sbjct: 364 FRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGK 423
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CGN+ A +F + E+N VS+NS+I+ + +G E +L LF KM ++G+ P+ +TFL++
Sbjct: 424 CGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTI 483
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSAC H G V++G YF+ M Y I EHYAC+VD+ GRAG L EA + I +M F P
Sbjct: 484 LSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSP 543
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
GVWG LLGA R H N++LA++A++ L++L+P+++ YV+LS++++ G+ ++R
Sbjct: 544 DDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRS 603
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K + ++K PG SWI + H+F+A S + +I L +
Sbjct: 604 LMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNL 648
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/514 (27%), Positives = 250/514 (48%), Gaps = 76/514 (14%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D ++LI Y + G E+A R+F+ M KD V W M++G+ K G A ++F+
Sbjct: 6 DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFE--- 62
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
MR NSIT + C G Q
Sbjct: 63 ----------------------------DMRNCQTKPNSITFASVLSICASEALSEFGNQ 94
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+HGLV GF +D ++ N+++ MY + G + +A K+F+ M + V+WN +I+G+V NG
Sbjct: 95 LHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGF 154
Query: 250 IEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIE------------------- 286
++EA LF M D +++ + + + +L++ E
Sbjct: 155 MDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSA 214
Query: 287 ----------------LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+F D V TAIISG+V N +A F +L + + PN
Sbjct: 215 LIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPN 274
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+TL+SVL A A ATLN G ++HA+++K ++ + ++++ +Y+KCG + AY+IF
Sbjct: 275 AVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFR 334
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ E++ V +N++I+ +QNG +EA++LFR+M EGL + ++ + LSAC ++ +
Sbjct: 335 RMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHH 394
Query: 451 G-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G I+ +K ++ E E + ++D+ G+ G+L+ A + M E W +++ A
Sbjct: 395 GKAIHSFMIKGAFDSEVFAE--SALIDMYGKCGNLSVA-RCVFDMMREKNEVSWNSIIAA 451
Query: 510 GRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
+H +L+++ ++E ++PD T +LS
Sbjct: 452 YGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILS 485
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 148/284 (52%), Gaps = 39/284 (13%)
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
GF+ D +G+S+I +Y G +++A ++F M +D V WN +++G+V GE A ++F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 258 ERM------PGK---------------------------------DFVSWTTMITGFSSK 278
E M P D + ++ +S
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G L +++LFN MP+ + VTW +I+GFV N +EA F EM+ V P+ +T +S L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+ +A+L QG +IH ++++ + DV ++++L+ +Y KC +V A +IF +IV
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
++ISG+ NGL +AL +FR + +E + PN +T SVL AC
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPAC 285
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
M D + +SL+ LY++ G + DA R+F + ++ V +N M++GF + G A+ +
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDIL 478
F M++ PN ITF SVLS C L E G ++ + ++ +P + +V +
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN--ALVAMY 118
Query: 479 GRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTHLNLDLAKLAAQHLME--LEPDSA 534
+ G L++A+ L N+M P V W ++ + +D A L ++ + PDS
Sbjct: 119 SKFGQLSDALKLFNTM---PDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSI 175
Query: 535 T 535
T
Sbjct: 176 T 176
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/623 (29%), Positives = 306/623 (49%), Gaps = 71/623 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R SY M+ AL+ + EA E++ P + + A I+GFVR + + A +
Sbjct: 177 MPERNVVSYTTMVDALMKRG-RVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGV 235
Query: 61 YVNMPARWRDS-----VC---------------------------------SNALISGYL 82
+ M + VC N+LI+ YL
Sbjct: 236 FRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYL 295
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
++G A ++F+ M KDVV+W +++D Y + G + AR + D MPE+N V+W ++
Sbjct: 296 RMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIAR 355
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + + L+ M G N + + AC R G ++H + G +
Sbjct: 356 HEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTN 415
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ + +S+I MY + + +A +F+ +P
Sbjct: 416 VFVSSSLIDMYCKCK-------------------------------KCRDAQTIFDTLPE 444
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K+ V W ++ +G+S G + +++ LF MP ++ +W IISG+ N Q+ +A R F M
Sbjct: 445 KNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAM 504
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L P ++T SSVL A A +L G HA +K+ ME + I +L +Y+K G++
Sbjct: 505 LASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDL 564
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ R+F + ERN V++ +MI G A+NG EE++ L M G+ PN+ TFL++L AC
Sbjct: 565 QSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLALLFAC 624
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVE+ YF+ M+ + I P +HY CMVD+L RAG L EA L+ +
Sbjct: 625 SHGGLVEQAIHYFEKMQA-WGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANS 683
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W ALL A T+ N ++ + AA+ L EL D+ YV+LS++Y+ G+ +D R+R+ K
Sbjct: 684 WAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVLMKG 743
Query: 563 KRIRKSPGCSWIILKDKVHLFLA 585
++K GCSW+ ++ + H F +
Sbjct: 744 TTLKKDGGCSWVQVRGQYHAFFS 766
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 206/417 (49%), Gaps = 66/417 (15%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
++ ++K G A +F+ M E++VV++ +MVD K+GRV EA E++++ P +V +
Sbjct: 157 MVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 216
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG--LV 194
TA + G+++ + + +F M G+ N IT + +AC + + + G +
Sbjct: 217 TATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIK 276
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
S F F+ I + NS+IT+Y R+G A KVF M +D VSW +L+ Y +G+++ A
Sbjct: 277 SNF-FESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGAR 335
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
R+ + MP ++ VSW T+I +GN ++++L++
Sbjct: 336 RVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYS------------------------- 370
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
+ML RPN SSVLSA A L G++IHA +KM ++V + +SL+
Sbjct: 371 ------QMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLID 424
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE-------- 426
+Y KC DA IF + E+NIV +NS+ SG++ NG EA+ LF+KM
Sbjct: 425 MYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTI 484
Query: 427 -----------------------GLVPNQITFLSVLSAC-NHVGLVEEGFIYFKSMK 459
G VP +ITF SVL AC N LV + K++K
Sbjct: 485 ISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIK 541
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 142/313 (45%), Gaps = 36/313 (11%)
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS---WNS 239
R + +H R G D + + ++T Y E ++ F A S ++
Sbjct: 97 RLPLALSLHAHAVRSGVAADTSVASHLLTTYAAFARAAECDRAFGDCVAAGAASPFTYDF 156
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
++ +V G+I A LF+ MP ++ VS+TTM+ +G + +++EL+ P +
Sbjct: 157 MVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 216
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TA ISGFV NE + A F +M+ VRPN +T ++ A I +K
Sbjct: 217 TATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIK 276
Query: 360 MN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNID------------------------- 393
N ES + +QNSL++LY + G+ A ++F +D
Sbjct: 277 SNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARR 336
Query: 394 ------ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
ERN VS+ ++I+ Q G EA+ L+ +M +G PN F SVLSAC +
Sbjct: 337 VLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLED 396
Query: 448 VEEGF-IYFKSMK 459
+ G I+ +S+K
Sbjct: 397 LRGGARIHARSLK 409
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 273/490 (55%), Gaps = 31/490 (6%)
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G + A E+FDK+P + + + GY++ + ++ M ++ N T
Sbjct: 66 KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L AC + EG Q+H V +FGF D GF
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGAD--------------GF--------------- 156
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
S N+LI YV+ +E+A R+F+ MP +D VSWT++ITG+S G ++K+ E+F +MPE
Sbjct: 157 --SLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPE 214
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
++ V+W A+I+ +V + + EAF F M ++V ++ +S+LSA L QG I
Sbjct: 215 RNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWI 274
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H ++ K +E D + +++ +Y KCG + A +F + ++ I S+N MI G A +G G
Sbjct: 275 HGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKG 334
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
E A+ LF++M+ E + P+ ITF++VLSAC H GLVEEG YF+ M + ++PG EH+ C
Sbjct: 335 EAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGC 394
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDS 533
MVD+LGRAG L EA LIN M P GV GAL+GA R H N +L + + ++ELEP +
Sbjct: 395 MVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHN 454
Query: 534 ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDL 593
+ YV+L++LY+ G+ D +VR + ++K+PG S I + V F+AG ++
Sbjct: 455 SGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQA 514
Query: 594 KEIEVTLQTI 603
KEI L I
Sbjct: 515 KEIYAKLDEI 524
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 162/337 (48%), Gaps = 13/337 (3%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N LI Y+ E+A R+F+ M ++DVV+W S++ GY + G V +ARE+F+ MP
Sbjct: 154 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMP 213
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E+N V+W AM+ Y++ + + F LF MR + + + AC +G
Sbjct: 214 ERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKW 273
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+HG + + G + D L ++I MY + G +++A++VF+ + ++ SWN +I G +G+
Sbjct: 274 IHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGK 333
Query: 250 IEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WT 300
E A LF+ M D +++ +++ + G +E+ F M E + +
Sbjct: 334 GEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFG 393
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
++ EEA + EM V P+ L +++ A G QI V+++
Sbjct: 394 CMVDLLGRAGLLEEARKLINEM---PVNPDAGVLGALVGACRIHGNTELGEQIGKKVIEL 450
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+ L +LY+ G D ++ +++R +
Sbjct: 451 EPHNSGRYV-LLANLYASAGRWEDVAKVRKLMNDRGV 486
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 144/316 (45%), Gaps = 45/316 (14%)
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
D + S G+L ++E+F+ +P D + I G++ + + ML
Sbjct: 53 DAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRML 112
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
K V PN+ T ++ A + +G QIHAHV+K +D N+L+ +Y ++
Sbjct: 113 HKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLE 172
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGE----------------------------- 414
A R+F N+ +R++VS+ S+I+G++Q G +
Sbjct: 173 QARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNR 232
Query: 415 --EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHY 471
EA LF +M+ E +V ++ S+LSAC +G +E+G +I+ K+ IE +
Sbjct: 233 LHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS--GIELDSKLA 290
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGA----GRTHLNLDLAKLAAQH 525
++D+ + G L +A ++ N + P G+ W ++G G+ ++L K +
Sbjct: 291 TTVIDMYCKCGCLEKASEVFNEL---PQKGISSWNCMIGGLAMHGKGEAAIELFKEMERE 347
Query: 526 LMELEPDSATPYVVLS 541
+ + PD T VLS
Sbjct: 348 M--VAPDGITFVNVLS 361
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 44/285 (15%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S N +I +N S+ +A +F MP R+ VS+ ++ITG+ + G +A E++ MP
Sbjct: 157 SLNNLIHMYVNFQ-SLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPE- 214
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAM------------------------------ 97
R+SV NA+I+ Y++ R EA +F+ M
Sbjct: 215 -RNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKW 273
Query: 98 ---------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
+E D +++D YCK G + +A E+F+++P+K + +W M+ G
Sbjct: 274 IHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGK 333
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR-FGFDYDIILGN 207
E +LF M R +A + IT + AC EG ++ G +
Sbjct: 334 GEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFG 393
Query: 208 SIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIE 251
++ + GR G ++EA K+ + M DA +L+ +G E
Sbjct: 394 CMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTE 438
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 298/545 (54%), Gaps = 51/545 (9%)
Query: 107 SMVDGYCKKGRVIEAREIF-DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
S+++ Y K G++ EA +F D E+NV A+ A++ G++ GF + MR G+
Sbjct: 51 SLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVM 110
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ T + C + ++HG + + G + D+ +G++++ Y + G M++A KV
Sbjct: 111 PDKYTFPCVVRTCCEVMEVK---KIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKV 167
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG----FSSKGNL 281
F +S RD V WN++I+GY G ++EA +F RM K ITG F+S+G+L
Sbjct: 168 FGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDL 227
Query: 282 EK-----------------------------------SIELFNMMPEKDDVTWTAIISGF 306
+ ++ +F M+ EKD +W +IIS
Sbjct: 228 DNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVH 287
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD- 365
++ R F +ML + P+ +T+++VL A + A L G +IH +++ + D
Sbjct: 288 EQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDD 347
Query: 366 -------VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ + N+++ +Y+KCG++ +A +IF ++ ++++ S+N MI G+ +G EAL
Sbjct: 348 ENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALG 407
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
+F +M + PN++T + VLSACNH G V G ++ M++ + + P EHY C++D+L
Sbjct: 408 MFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDML 467
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L +A +++ M + P VW ALLGA R H N +LA++AA+ +++LEP+ YV
Sbjct: 468 GRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYV 527
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
++S++Y VIG+ + VR K + ++K+PGCSWI LKD VH+F G ++ +L +
Sbjct: 528 LMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFRTGDRTHSELNALTN 587
Query: 599 TLQTI 603
L I
Sbjct: 588 QLCDI 592
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 202/423 (47%), Gaps = 48/423 (11%)
Query: 166 FNSITLTILF-EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
N++T + F ++C +G Q+H L+ +GF S+I MY + G M EA
Sbjct: 8 LNNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAIL 67
Query: 225 VF-SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER------MPGK-------------- 263
VF +R+ ++N++ISG+V NG + ++ +++ MP K
Sbjct: 68 VFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVM 127
Query: 264 ----------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
D + ++ + G++E + ++F + +D V W A+I+G+
Sbjct: 128 EVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYA 187
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
+EA F M K V P++ T++ +LS A+ L+ G +H V+KM +S VS
Sbjct: 188 KIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVS 247
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ N+L+ +Y KC ++ DA IF I+E++I S+NS+IS Q G + L LF KM G
Sbjct: 248 VSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSG 307
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA--------CMVDILG 479
++P+ +T +VL AC+H+ + G M + + E+ A ++D+
Sbjct: 308 ILPDLVTITTVLPACSHLAALMHGREIHGYM-IINGLGKDDENGAVDNLLVSNAVMDMYA 366
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL-MELEPDSATPYV 538
+ GS+ A+ + +SM+ + ++G G L+ + +Q E +P+ T
Sbjct: 367 KCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVG 426
Query: 539 VLS 541
VLS
Sbjct: 427 VLS 429
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 237/542 (43%), Gaps = 101/542 (18%)
Query: 13 ITALIN--NNC-SIYEAFEIF-ATMPMRNAVSYAAMITGFVRRGM------FYEAEELYV 62
IT+LIN + C + EA +F RN +Y A+I+GFV G+ FY+ L
Sbjct: 49 ITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEG 108
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
MP ++ C ++V + + + +E DV ++V+ Y K G + +A+
Sbjct: 109 VMPDKYTFP-CVVRTCCEVMEVKKIHGC--LLKMGLELDVFVGSALVNTYLKNGSMEDAQ 165
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
++F ++ ++VV W AM++GY K+ C ++ ++F M G+A + T+T +
Sbjct: 166 KVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRG 225
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G VHG+V + G+D + + N++I MYG+ + +A +F M++++D SWNS+IS
Sbjct: 226 DLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIIS 285
Query: 243 GYVHNGEIEEAYRLFERMPGK----DFVSWTTMITG------------------------ 274
+ G+ + RLF++M G D V+ TT++
Sbjct: 286 VHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGK 345
Query: 275 -------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
++ G++ ++++F+ M +KD +W +I G+ + EA
Sbjct: 346 DDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEA 405
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F +M + +PN++TL VLSA ++ G A MES
Sbjct: 406 LGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQ-----MES----------- 449
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
+ + I+ Y +I + G E+A + +KM + N + +
Sbjct: 450 ---------TFGVIPTIEH-----YTCVIDMLGRAGHLEDAYEIVQKMPIQA---NPVVW 492
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH---YACMVDILGRAGSLAEAIDLIN 492
++L AC G E I + + L PEH Y M ++ G G E +++
Sbjct: 493 RALLGACRLHGNAELAEIAARQVLQLE-----PEHCGSYVLMSNVYGVIGRYEEVLEVRK 547
Query: 493 SM 494
+M
Sbjct: 548 TM 549
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/617 (29%), Positives = 312/617 (50%), Gaps = 71/617 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRR-------GM 53
M +R+ SY M+ AL+ S+ +A E++ P+ + + AMI GFV G+
Sbjct: 174 MPERSVVSYTTMVDALMKRG-SVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGV 232
Query: 54 FYEAEELYVN-----------------------------MPARWRDSVCS--NALISGYL 82
F+E V+ M + D N+LI+ YL
Sbjct: 233 FHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYL 292
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ G + A R+F+ M +DVV+W +++D Y + G + AR + D+MPE+N V+W +V
Sbjct: 293 RKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVAR 352
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + ++ L+ M G N + + AC R G ++H
Sbjct: 353 HEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIH----------- 401
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
N+ M + ++LI Y ++ +A +F +P
Sbjct: 402 --------------------NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQ 441
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K+ V W ++I+G+S+ + ++ ELF MP ++ +W +IISG+ N Q+ +A + F M
Sbjct: 442 KNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAM 501
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L P ++T SSVL A A+ +L G +HA ++K+ ++ + + +L +Y+K G++
Sbjct: 502 LASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDL 561
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ R+F + +RN V++ +MI G A+NG EE++ LF M G+ PN+ TFL++L AC
Sbjct: 562 DSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFAC 621
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVE YF+ M+ I P +HY CMVD+L RAG LAEA DL+ + +
Sbjct: 622 SHSGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANS 680
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W ALL A + N ++ + AA+ L EL+ D+ YV+LS++Y+ GK +D +R+ K
Sbjct: 681 WAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKG 740
Query: 563 KRIRKSPGCSWIILKDK 579
++K GCSW+ ++D+
Sbjct: 741 INLKKDGGCSWVQIRDE 757
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 199/407 (48%), Gaps = 63/407 (15%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
++ ++K G A R+F+ M E+ VV++ +MVD K+G V +A E++ + P +V +
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
TAM+ G++ + +D +F M G++ N ITL + +AC + + + GL +
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMK 273
Query: 197 FG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
D ++ + NS+IT+Y R G D A ++F M RD VSW +L+ Y G++E A R
Sbjct: 274 SNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARR 333
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+ + MP ++ VSW T++ KGN ++++ L++
Sbjct: 334 VLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYS-------------------------- 367
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+ML RPN SSVL A A+ L G +IH +KM ++V + ++L+ +
Sbjct: 368 -----QMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDM 422
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK----------- 424
Y KC + DA IF ++ ++NIV +NS+ISG++ N EA LF+KM
Sbjct: 423 YCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSII 482
Query: 425 --------------------DEGLVPNQITFLSVLSACNHVGLVEEG 451
G P +ITF SVL AC + +E G
Sbjct: 483 SGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG 529
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 145/300 (48%), Gaps = 38/300 (12%)
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF----SMMSKRDAVSWNSLISG 243
+ H LVS G D + + ++T Y + + F S++ +++ ++
Sbjct: 100 IHAHALVS--GLTADGSVASHLLTAYAAFARAADRDGAFRDCVSVVGAASPFAYDFMVRE 157
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
+V G+I A RLF+ MP + VS+TTM+ +G++ ++EL+ P +TA+I
Sbjct: 158 HVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMI 217
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN-M 362
+GFV NE ++A F EML V PN++TL SV+ A + I +K N +
Sbjct: 218 AGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLL 277
Query: 363 ESDVSIQNSLVSLYSKCGN---------------------VVDAY----------RIFTN 391
+ ++ ++NSL++LY + G+ ++D Y R+
Sbjct: 278 DKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDE 337
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ ERN VS+ ++++ Q G +EA++L+ +M +G PN F SVL AC + + G
Sbjct: 338 MPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSG 397
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 314/624 (50%), Gaps = 50/624 (8%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW---RDSVCSNALIS----GYLKVG 85
MP +N V++ ++++G+ R G A ++ +M D C+ AL++ G L+ G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
+ + A D +++ Y + G + A+E+FD+M +VV +T+++ + +
Sbjct: 61 E-QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCR 119
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LVSRFGF-DYDI 203
FE + + M + G+ N T+T + AC R G Q+HG L+ + G +
Sbjct: 120 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSV 175
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--- 260
++I Y R G A VF + ++ VSW S++ Y+ +G +EEA ++F M
Sbjct: 176 YSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISE 235
Query: 261 ---PGK------------------------------DFVSWTTMITGFSSKGNLEKSIEL 287
P + D +++ + G +E+ +
Sbjct: 236 GVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAM 295
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
N + D V+WT IS N E+A +M + PN SSVLS+ A A+L
Sbjct: 296 LNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASL 355
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
+QG Q H +K+ +S++ N+L+++YSKCG + A F + ++ S+NS+I G
Sbjct: 356 DQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGH 415
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
AQ+G +AL +F KM+ G+ P+ TFL VL CNH G+VEEG ++F+ M Y+ P
Sbjct: 416 AQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPA 475
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
P HYACM+D+LGR G EA+ +IN M FEP +W LL + + H NLD+ KLAA LM
Sbjct: 476 PSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLM 535
Query: 528 ELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGR 587
EL + YV++S++Y++ G+ D +VR + ++K GCSWI + ++VH F +
Sbjct: 536 ELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRD 595
Query: 588 KSCLDLKEIEVTLQTISKGTKEFD 611
S + I L + ++FD
Sbjct: 596 MSHPNSDSIYQMLGELVAVMQDFD 619
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 186/412 (45%), Gaps = 27/412 (6%)
Query: 4 RTSASYNAMITALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
R+ + Y++ TALI+ N A +F ++ +N VS+ +M+ ++R G EA ++
Sbjct: 171 RSQSVYSS--TALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQV 228
Query: 61 YVNM------PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+ +M P + S+ A G + +GR + I ++ D+ +++ Y +
Sbjct: 229 FGDMISEGVDPNEFALSIVLGA--CGSIGLGRQLHCSAIKHDLI-TDIRVSNALLSMYGR 285
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G V E + +K+ ++V+WT + + E L M G N + +
Sbjct: 286 TGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSV 345
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
+C +G+Q H L + G D +I GN++I MY + G M A F +M D
Sbjct: 346 LSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDV 405
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNM 290
SWNSLI G+ +G+ +A +F +M D ++ ++ G + G +E+ F +
Sbjct: 406 TSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRL 465
Query: 291 MPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
M ++ T + +I N +++EA R +M P+ L ++L++
Sbjct: 466 MIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDM---PFEPDALIWKTLLASCKLHR 522
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L+ G +++++ + D + + ++Y+ G DA ++ +DE +
Sbjct: 523 NLDIGKLAADRLMELS-DRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGV 573
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 186/475 (39%), Gaps = 101/475 (21%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------S 71
S+ A E+F M + V Y ++I+ F R G F A E + M + +
Sbjct: 91 SLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILT 150
Query: 72 VCSNAL---ISGYL--KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
C L I GYL K+G + + V + +++D Y + G A+ +FD
Sbjct: 151 ACPRVLGQQIHGYLIKKIG-----------LRSQSVYSSTALIDFYSRNGEFKLAKAVFD 199
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+ KNVV+W +M+ Y++ E+ +F M G+ N L+I+ ACG
Sbjct: 200 SLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL--- 256
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G Q+H + DI + N++++MYGR G ++E + + + D VSW + IS
Sbjct: 257 GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQ 316
Query: 247 NGEIEEAYRLFERMPGKDFV---------------------------------------S 267
NG E+A L +M + F +
Sbjct: 317 NGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICT 376
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+I +S G + + F++M D +W ++I G + +A F +M +
Sbjct: 377 GNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGI 436
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ T VL + + +G L+ + ++D Y
Sbjct: 437 KPDDSTFLGVLMGCNHSGMVEEG-----------------------ELFFRL--MIDQYS 471
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
FT Y MI +NG +EAL + M E P+ + + ++L++C
Sbjct: 472 -FTPAPSH----YACMIDMLGRNGRFDEALRMINDMPFE---PDALIWKTLLASC 518
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 202/668 (30%), Positives = 334/668 (50%), Gaps = 59/668 (8%)
Query: 3 DRTSASYNAMITALINNNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
D T + N++I+ NC SI EA +F M R+ +S+ ++IT V G ++ E +
Sbjct: 192 DTTVSVANSLISMF--GNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYF 249
Query: 62 VNMPARWRDSVCSNALISGYLKVGRCEEAAR--------IFEAMVEKDVVAWGSMVDGYC 113
M R+ + IS L V + R + ++ +E +V S++ Y
Sbjct: 250 SQM--RYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYS 307
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
+ G+ +A +F KM E+++++W +M+ ++ + +L + M + A N +T T
Sbjct: 308 QAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTT 367
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
AC + VH V G +++I+GN+++TMYG+ G M A +V +M RD
Sbjct: 368 ALSAC---YNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRD 424
Query: 234 AVSWNSLISGYVHNGEIEEAYRLF-----ERMPG-------------------------- 262
V+WN+LI G+ N E A F E +P
Sbjct: 425 EVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIH 484
Query: 263 ----------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
+ FV +++IT ++ G+L S +F+++ K+ TW AI+S +
Sbjct: 485 AHIVVAGFELETFVQ-SSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPG 543
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EEA + I+M + +Q + S + L++G Q+H+ ++K ES+ + N+
Sbjct: 544 EEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNAT 603
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ +Y KCG + D +RI R+ S+N +IS A++G ++A F +M D GL P+
Sbjct: 604 MDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDH 663
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
+TF+S+LSAC+H GLV+EG YF SM T + + G EH C++D+LGRAG L EA + IN
Sbjct: 664 VTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFIN 723
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
M P VW +LL A + H NL+LA+ AA L EL+ + YV+ S++ + + RD
Sbjct: 724 KMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRD 783
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
VR + + I+K P CSW+ LK++V F G + EI L+ + K +E +
Sbjct: 784 VENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGY 843
Query: 613 -PKHDWSL 619
P +SL
Sbjct: 844 MPDTSYSL 851
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 233/466 (50%), Gaps = 49/466 (10%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARW-RDSVCS 74
SI A +F MP RN S+ +++GFVR G + +A + + +M P+ + S+ +
Sbjct: 7 SIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVT 66
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
SG + G + A + + + DV S++ Y G V E +F ++ E N+V
Sbjct: 67 ACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIV 126
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WT+++ GY C ++ ++ +RR G+ N + + +CG G QV G V
Sbjct: 127 SWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSV 186
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G D + + NS+I+M+G ++EA+ VF M +RD +SWNS+I+ VHNG E++
Sbjct: 187 IKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSL 246
Query: 255 RLFERM----PGKDFVS---------------W--------------------TTMITGF 275
F +M D+++ W ++++ +
Sbjct: 247 EYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMY 306
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
S G E + +F+ M E+D ++W ++++ V+N Y A IEML+ N +T +
Sbjct: 307 SQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFT 366
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+ LSA TL +HA V+ + + ++ I N+LV++Y K G++ A R+ + +R
Sbjct: 367 TALSACYNLETLK---IVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDR 423
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ V++N++I G A N A+ F +++EG+ N IT +++LSA
Sbjct: 424 DEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 214/438 (48%), Gaps = 45/438 (10%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G + A+ +FDKMPE+N +W ++ G+++V ++ F M G+ +S
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 172 TILFEACGRFFRYREGV-QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L AC R EG QVH V + G D+ +G S++ YG G++ E + VF +
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121
Query: 231 KRDAVSWNSLISGYVHNGEIEEA---YR-----------------------LFERMPGKD 264
+ + VSW SL+ GY +NG ++E YR L ++M G
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181
Query: 265 FVS-------------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
+ ++I+ F + ++E++ +F+ M E+D ++W +II+ V+N
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGH 241
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
E++ +F +M + + +T+S++L + L G +H VVK +ES+V + NS
Sbjct: 242 CEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNS 301
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
L+S+YS+ G DA +F + ER+++S+NSM++ NG AL L +M N
Sbjct: 302 LLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATN 361
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
+TF + LSAC ++ ++ + + +N+ G +V + G+ GS+A A +
Sbjct: 362 YVTFTTALSACYNLETLKIVHAFVILLGLHHNLIIGNA----LVTMYGKFGSMAAAQRVC 417
Query: 492 NSMTFEPPPGVWGALLGA 509
M + W AL+G
Sbjct: 418 KIMP-DRDEVTWNALIGG 434
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 126/271 (46%), Gaps = 40/271 (14%)
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK-- 263
MY + G ++ A VF M +R+ SWN+L+SG+V G ++A + F M P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 264 --------------------------------DFVSWTTMITGFSSKGNLEKSIELFNMM 291
D T+++ + + G + + +F +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
E + V+WT+++ G+ N +E + + R V N+ +++V+ + G
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
Q+ V+K +++ VS+ NSL+S++ C ++ +A +F ++ ER+ +S+NS+I+ NG
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
E++L F +M+ + IT ++L C
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVC 271
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSK G++ A +F + ERN S+N+++SGF + G ++A+ F M + G+ P+
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 435 FLSVLSACNHVGLVEEG 451
S+++AC+ G + EG
Sbjct: 61 AASLVTACDRSGCMTEG 77
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/484 (36%), Positives = 273/484 (56%), Gaps = 35/484 (7%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
IF+++ N + A++ GY+ + ++ + + MR+ G+ S T T LF+ACG
Sbjct: 102 IFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMD 161
Query: 184 YREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G Q+HG + GF D+ +GNS+I MY + GF
Sbjct: 162 VGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGF------------------------ 197
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
+E ++F+ MP +D +SWT +I+ + GN+E + ELF+ +P KD V WT +
Sbjct: 198 -------LECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVM 250
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH--AHVVKM 360
+SGF N + EA +F +M V +++TL V+SA A I A +
Sbjct: 251 VSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEF 310
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ V + ++L+ +YSKCG+V DAYR+F + ERN+ SY+SMI GFA +G +A+ LF
Sbjct: 311 GGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLF 370
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M + PN++TF+ VL+AC+H G+VE+G+ F+ M+ Y I+P +HY CMVD+LGR
Sbjct: 371 DEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGR 430
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA +L+ +M EP GVWGALLGA R H + D+A +AA HL ELEP Y++L
Sbjct: 431 AGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILL 490
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI-ILKDKVHLFLAGRKSCLDLKEIEVT 599
+++Y+ G+ D + VR + + +RK+P SWI K VH F +G + EI+
Sbjct: 491 ANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQA 550
Query: 600 LQTI 603
L+ +
Sbjct: 551 LEDL 554
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 125/223 (56%), Gaps = 6/223 (2%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N++I Y+K G E ++F+ M +DV++W ++ Y K G + A E+FD +P K++V
Sbjct: 186 NSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMV 245
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF--FRYREGVQVHG 192
AWT MV G+ + + F M+ G+ + ITL + AC + +Y + ++
Sbjct: 246 AWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVA 305
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
S FG + +++G+++I MY + G + +A +VF M +R+ S++S+I G+ +G + +
Sbjct: 306 EKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHD 365
Query: 253 AYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
A +LF+ M + V++ ++T S G +E+ ++F +M
Sbjct: 366 AMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELM 408
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 47/263 (17%)
Query: 10 NAMITALINNNCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
N+MI I C E ++F MP R+ +S+ +I+ +V+ G A EL+ +P
Sbjct: 186 NSMIDMYIK--CGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPV-- 241
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAM----VEKD----------------------- 101
+D V ++SG+ + + EA FE M VE D
Sbjct: 242 KDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWI 301
Query: 102 --------------VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
VV +++D Y K G V +A +F M E+NV ++++M+ G+
Sbjct: 302 RDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHG 361
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR-FGFDYDIILG 206
D LF M + + N +T + AC +G Q+ L+ + +G
Sbjct: 362 RVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHY 421
Query: 207 NSIITMYGRLGFMDEANKVFSMM 229
++ + GR G + EA+++ M
Sbjct: 422 TCMVDLLGRAGRLQEAHELVKTM 444
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 14 TALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------ 64
+ALI+ + C S+ +A+ +F M RN SY++MI GF G ++A +L+ M
Sbjct: 320 SALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIK 379
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVI 119
P R V +++ G E+ +IFE M ++ + MVD + GR+
Sbjct: 380 PNR----VTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQ 435
Query: 120 EAREIFDKMP-EKNVVAWTAMV 140
EA E+ MP E + W A++
Sbjct: 436 EAHELVKTMPIEPHGGVWGALL 457
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY--RIFTNI 392
S +++ L Q Q+HA ++ ++ + L+ +K VD Y IF +
Sbjct: 47 SQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQV 106
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ N YN++I G+ +E+ + M+ EG+VP TF ++ AC
Sbjct: 107 NYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKAC 156
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 307/554 (55%), Gaps = 42/554 (7%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A+I + + + S+++ Y G + +A++IF P KNVV+WT ++ G K DCF
Sbjct: 45 AQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFV 104
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ D+F M G N++T++ + A R VH R GF+ ++ + +++
Sbjct: 105 EAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALV 164
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFV 266
MY + G M A ++F MS+R+ VSWN+++SGY +G EEA LF M K DF
Sbjct: 165 DMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFY 224
Query: 267 SWTTMI---------------------TGFSSKGNLEKSI--------------ELFNMM 291
+ ++I TG+ + +++ ++ +F+ M
Sbjct: 225 TIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEM 284
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQG 350
KD WT +++GF + ++ A + F +ML ++++ + + L +LS+ + + L QG
Sbjct: 285 FVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQG 344
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
++HA +K +++ + ++++ +Y+ CGN+ DA R F + E+++V +N+MI+G N
Sbjct: 345 RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMN 404
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPE 469
G G +A++LF +MK GL P++ TF+SVL AC+H G+V EG I++ +KT ++I P +
Sbjct: 405 GYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDI-PNLQ 463
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
HYAC++DILGRAG L A IN+M F+P V+ LLGA R H N+ L +Q + E+
Sbjct: 464 HYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEM 523
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
EP+ A YV+LS++Y++ G R + KR++K PG S I + +++ F+AG K
Sbjct: 524 EPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKD 583
Query: 590 CLDLKEIEVTLQTI 603
+IE L+ +
Sbjct: 584 HPQYFKIEGILKGL 597
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 190/415 (45%), Gaps = 47/415 (11%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--VNMPARWRDSVCSNALISGYL 82
+A +IF P +N VS+ +I+G + F EA +++ + M ++V ++++ +
Sbjct: 74 DAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFA 133
Query: 83 KVG--RCEEAARIF--EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+G R ++ F E +V ++VD Y K G + AR++F+ M E+NVV+W A
Sbjct: 134 NLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNA 193
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+V GY E+ DLF MRR G+ + T+ L A + G +HG + R G
Sbjct: 194 IVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG 253
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
++ D + +++ +Y +D+A++VFS M +D +W +++G+ + A + F
Sbjct: 254 YENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFN 313
Query: 259 RMPG----------------------------------------KDFVSWTTMITGFSSK 278
+M G + + +I +++
Sbjct: 314 KMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANC 373
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
GNLE + F M EKD V W A+I+G N +A F++M + P++ T SVL
Sbjct: 374 GNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVL 433
Query: 339 SASAATATLNQGSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
A + + +G QI H+VK + + ++ ++ + + G + AY N+
Sbjct: 434 YACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNM 488
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 186/397 (46%), Gaps = 50/397 (12%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + G ++ L NS++ Y G + +A ++F ++ VSW LISG N
Sbjct: 42 QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKND 101
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKG--NLEKSI----------------- 285
EA +F M +F V+ ++++ F++ G + KS+
Sbjct: 102 CFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161
Query: 286 ----------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+LF M E++ V+W AI+SG+ ++ EEA F M RK +
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ T+ S++ AS + L G+ IH +++ E+D I+ +L+ +Y V DA+R+F
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVF 281
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD-EGLVPNQITFLSVLSACNHVGLV 448
+ + +++ ++ M++GF+ + A+ F KM + L + I + +LS+C+H G +
Sbjct: 282 SEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGAL 341
Query: 449 EEG-FIYFKSMKTLY--NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
++G ++ ++KT + NI G + ++D+ G+L +A M E W A
Sbjct: 342 QQGRRVHALAIKTCFANNIFVG----SAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNA 396
Query: 506 LL-GAGRTHLNLDLAKLAAQHLME-LEPDSATPYVVL 540
++ G G D L Q L+PD +T VL
Sbjct: 397 MIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVL 433
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 195/464 (42%), Gaps = 91/464 (19%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPM----RNAVSYAAMITGFVRRGMFYEAEE 59
+ S+ +I+ L N+C + EA ++F M M NAV+ ++++ F G+ A+
Sbjct: 85 KNVVSWTILISGLAKNDCFV-EAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKS 143
Query: 60 LYVN-MPARWRDSV-CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
++ + + +V AL+ Y K G A ++FE+M E++VV+W ++V GY G
Sbjct: 144 VHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGF 203
Query: 118 VIEAREIFDKMPEKNVVA---------------------------------------WTA 138
EA ++F+ M K ++ TA
Sbjct: 204 SEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTA 263
Query: 139 MVDGYMKVDCFEDGFDLFLSM---------------------RRGGMAFN---------- 167
++D Y+ +C +D +F M R FN
Sbjct: 264 LMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKL 323
Query: 168 -SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
SI L + +C ++G +VH L + F +I +G+++I MY G +++A + F
Sbjct: 324 DSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFF 383
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLE 282
M ++D V WN++I+G NG +A LF +M G D ++ +++ S G +
Sbjct: 384 YGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVY 443
Query: 283 KSIELF-NMMPEKDDVT----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
+ +++F +M+ D+ + +I Q + A+ + M +P+ S++
Sbjct: 444 EGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNM---PFQPDFDVYSTL 500
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
L A + G +I + +M +D L ++Y+ GN
Sbjct: 501 LGACRIHGNIKLGHEISQKIFEME-PNDAGYYVLLSNMYALAGN 543
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 268/469 (57%), Gaps = 1/469 (0%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
SMV + A ++F ++P+ + W + G + L+ M + +
Sbjct: 46 SMVGPNATSAVIRYALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKP 105
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
++ T + +AC + F G VHG V R GF ++++ N+++ + + G + A +F
Sbjct: 106 DNFTFPFVLKACTKLFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIF 165
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
K D V+W++LI+GY G++ A +LF+ MP +D VSW MIT ++ G +E +
Sbjct: 166 DDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARR 225
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
LF+ P KD V+W A+I G+V EA F EM P+++T+ S+LSA A
Sbjct: 226 LFDEAPMKDIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGD 285
Query: 347 LNQGSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
L G ++HA +++MN + + N+LV +Y+KCGN+ A R+F I ++++VS+NS+IS
Sbjct: 286 LESGEKVHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVIS 345
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G A +G EE+L LFR+MK + P+++TF+ VL+AC+H G V+EG YF MK Y IE
Sbjct: 346 GLAFHGHAEESLGLFREMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIE 405
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
P H C+VD+LGRAG L EA + I SM EP VW +LLGA + H +++LAK A +
Sbjct: 406 PTIRHCGCVVDMLGRAGLLKEAFNFIASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQ 465
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
L+ + D + YV+LS++Y+ G+ VR + K+ G S++
Sbjct: 466 LLRMRGDQSGDYVLLSNVYASQGEWDGAENVRKLMDDNGVTKNRGSSFV 514
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 13/301 (4%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V +ALI+GY + G A ++F+ M ++D+V+W M+ Y K G + AR +FD+ P
Sbjct: 172 DVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAP 231
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
K++V+W A++ GY+ + + +LF M G + +T+ L AC G +
Sbjct: 232 MKDIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEK 291
Query: 190 VHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
VH ++ +LGN+++ MY + G + +A +VF ++ +D VSWNS+ISG +G
Sbjct: 292 VHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHG 351
Query: 249 EIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
EE+ LF M D V++ ++ S GN+++ F++M K + T
Sbjct: 352 HAEESLGLFREMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHC 411
Query: 305 GFVNN-----EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
G V + +EAF + M + PN + S+L A + + + +++
Sbjct: 412 GCVVDMLGRAGLLKEAFNFIASM---KIEPNAIVWRSLLGACKVHGDVELAKRANEQLLR 468
Query: 360 M 360
M
Sbjct: 469 M 469
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/481 (23%), Positives = 191/481 (39%), Gaps = 134/481 (27%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR----------WRDSV 72
I A ++FA +P + + I G + A LY M R +
Sbjct: 57 IRYALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKA 116
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
C+ ++ G R+ +VV +++ + K G + A +IFD + +
Sbjct: 117 CTKLF---WVNTGSAVHG-RVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGD 172
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VVAW+A++ GY + RG ++
Sbjct: 173 VVAWSALIAGYAQ---------------RGDLS--------------------------- 190
Query: 193 LVSRFGFD----YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
V+R FD D++ N +IT+Y + G M+ A ++F +D VSWN+LI GYV
Sbjct: 191 -VARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRN 249
Query: 249 EIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLE---------------------- 282
EA LF+ M G D V+ ++++ + G+LE
Sbjct: 250 LNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTLLG 309
Query: 283 --------------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
K++ +F ++ +KD V+W ++ISG + EE+ F EM V
Sbjct: 310 NALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVC 369
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P+++T VL+A + +++G++ + H++K + + +I++ CG VVD
Sbjct: 370 PDEVTFVGVLAACSHAGNVDEGNR-YFHLMKNKYKIEPTIRH--------CGCVVDM--- 417
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
+ GL +EA N MK E PN I + S+L AC G V
Sbjct: 418 ------------------LGRAGLLKEAFNFIASMKIE---PNAIVWRSLLGACKVHGDV 456
Query: 449 E 449
E
Sbjct: 457 E 457
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 270/489 (55%), Gaps = 40/489 (8%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F++MPE++V++W +M+ YM + L M
Sbjct: 129 AYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMP-------------------- 168
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ +I+ NS++ + G M+ A+ VF M R+ VSWNS+
Sbjct: 169 -------------------ERNIVTWNSVVCGLSKAGNMELAHSVFEQMPLRNEVSWNSM 209
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
ISGYV G++ A +F +MP K VSWT MI+G+++ G+L+ + +FN MP K+ V+W
Sbjct: 210 ISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWN 269
Query: 301 AIISGFVNNEQYEEAFRWFIEML-RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
A+ISG+V+N ++++A F ML + RP+Q TL S+LSA A +L G I++++ K
Sbjct: 270 AMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKK 329
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ + + N+L+ +++KCG+V +A +F ++ +R I+++ +M+SG A NG EA+NL
Sbjct: 330 NKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINL 389
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F KM EG P+ + F++VLSAC H GLVEEG F M + I+P EHY CMVD+LG
Sbjct: 390 FDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLG 449
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L EA+ M +P +W LL + H N DL K + +M+ EP + + +
Sbjct: 450 RAGKLEEAVRFTARMHLKPNAVIWATLLFCCKIHGNGDLLKSVTEKIMDQEPSNPSYLTL 509
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
+S+L + G+ D R+ + +R+ K PGCS I + ++VH FLA + KEI
Sbjct: 510 VSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCSSIQVGNRVHEFLAKDTRHVQRKEIYRA 569
Query: 600 LQTISKGTK 608
L T+
Sbjct: 570 LSHYKNATE 578
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 175/348 (50%), Gaps = 16/348 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N+MI+A + I A + MP RN V++ +++ G + G A +
Sbjct: 136 MPERDVISWNSMISAYMTRG-EIQSAIGLLDKMPERNIVTWNSVVCGLSKAGNMELAHSV 194
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R+ V N++ISGY+++G A IF M EK VV+W +M+ GY G +
Sbjct: 195 FEQMP--LRNEVSWNSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKS 252
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEACG 179
A IF+ MP KNVV+W AM+ GY+ F+ +F M G + TL + AC
Sbjct: 253 AENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACA 312
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
G ++ + + I LGN++I M+ + G ++ A +VF MSKR ++W +
Sbjct: 313 HLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTT 372
Query: 240 LISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
++SG NG+ EA LF++M D V + +++ + G +E+ +F+ M ++
Sbjct: 373 MVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEF 432
Query: 296 DVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+ + ++ + EEA R+ R ++PN + +++L
Sbjct: 433 GIKPRIEHYGCMVDLLGRAGKLEEAVRF---TARMHLKPNAVIWATLL 477
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 108/263 (41%), Gaps = 41/263 (15%)
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
++EA R + M V N T + +L + L G IH ++K+ S V +QNS
Sbjct: 55 HKEALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNS 114
Query: 372 LVSLYSKCG-NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
L+ Y+ C N+ AYR+F + ER+++S+NSMIS + G + A+ L KM + +V
Sbjct: 115 LLGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVT 174
Query: 431 ---------------------------NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
N++++ S++S +G V F M
Sbjct: 175 WNSVVCGLSKAGNMELAHSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMP---- 230
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTHLNLDLAKL 521
E + M+ G L A ++ N M P V W A++ + D A
Sbjct: 231 -EKTVVSWTAMISGYATNGDLKSAENIFNHM---PVKNVVSWNAMISGYVHNHEFDQALC 286
Query: 522 AAQHLM---ELEPDSATPYVVLS 541
H++ E PD T +LS
Sbjct: 287 VFHHMLINGECRPDQTTLISILS 309
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 298/537 (55%), Gaps = 40/537 (7%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
S+V Y K RV AR++FD+M E++V++W ++++GY+ E G +F+ M G+
Sbjct: 235 SLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEI 294
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T+ +F C G VH + F + N+++ MY + G +D A VF
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVF 354
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------- 261
MS R VS+ S+I+GY G EA +LFE M
Sbjct: 355 REMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLD 414
Query: 262 -GKDFVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
GK W ++ ++ G++ ++ +F+ M KD ++W +I G+
Sbjct: 415 EGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYS 474
Query: 308 NNEQYEEAFRWF-IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N EA F + ++ K P++ T++ VL A A+ + ++G +IH ++++ SD
Sbjct: 475 KNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ NSLV +Y+KCG ++ A +F +I +++VS+ MI+G+ +G G+EA+ LF +M+
Sbjct: 535 HVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G+ P++I+F+S+L AC+H GLV+EG+ +F M+ IEP EHYAC+VD+L R G+L++
Sbjct: 595 GIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSK 654
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A I +M P +WGALL R H ++ LA+ A+ + ELEP++ YV+++++Y+
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAE 714
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K + R+R + + +RK+PGCSWI +K +V++F+AG S + ++IE L+ +
Sbjct: 715 AEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGV 771
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 214/468 (45%), Gaps = 76/468 (16%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
DS + L Y G +EA+R +FD++
Sbjct: 128 DSNLGSKLALMYTNCGDLKEASR-------------------------------VFDQVK 156
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ + W +++ K F LF M G+ +S T + + ++ G Q
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQ 216
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+HG + + GF +GNS++ Y + +D A KVF M++RD +SWNS+I+GYV NG
Sbjct: 217 LHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 250 IEEAYRLFERMPGK----DFVSWTTMITG------------------------------- 274
E+ +F +M D + ++ G
Sbjct: 277 AEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNT 336
Query: 275 ----FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+S G+L+ + +F M + V++T++I+G+ EA + F EM + + P+
Sbjct: 337 LLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T+++VL+ A L++G ++H + + +M D+ + N+L+ +Y+KCG++ +A +F+
Sbjct: 397 VYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFS 456
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG-LVPNQITFLSVLSACNHVGLVE 449
+ ++I+S+N++I G+++N EAL+LF + E P++ T VL AC + +
Sbjct: 457 EMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFD 516
Query: 450 EGF-IYFKSMKTLYNIEPGPEHYA-CMVDILGRAGSLAEAIDLINSMT 495
+G I+ M+ Y H A +VD+ + G+L A L + +T
Sbjct: 517 KGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGALLLARLLFDDIT 561
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 160/321 (49%), Gaps = 39/321 (12%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
TL + + C ++G +V + GF D LG+ + MY G + EA++VF +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV 155
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERM--PGKDFVSWT------------------ 269
A+ WN L++ +G+ + LF++M G + S+T
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGE 215
Query: 270 -----TMITGFSSKGNLEKSI--------------ELFNMMPEKDDVTWTAIISGFVNNE 310
+ +GF + ++ S+ ++F+ M E+D ++W +II+G+V+N
Sbjct: 216 QLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
E+ F++ML + + T+ SV + A + ++ G +H VK + N
Sbjct: 276 LAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCN 335
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+ +YSKCG++ A +F + R++VSY SMI+G+A+ GL EA+ LF +M++EG+ P
Sbjct: 336 TLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 431 NQITFLSVLSACNHVGLVEEG 451
+ T +VL+ C L++EG
Sbjct: 396 DVYTVTAVLNCCARNRLLDEG 416
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
D+ P TL SVL A + +L G ++ + D ++ + L +Y+ CG++ +A
Sbjct: 91 DIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEA 148
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
R+F + + +N +++ A++G ++ LF+KM G+ + TF V
Sbjct: 149 SRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV 201
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/623 (29%), Positives = 315/623 (50%), Gaps = 71/623 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRR-------GM 53
M +R+ SY M+ AL+ S+ +A E++ P+ + + AMI GFV G+
Sbjct: 174 MPERSVVSYTTMVDALMKRG-SVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGV 232
Query: 54 FYEAEELYVN-----------------------------MPARWRDSVCS--NALISGYL 82
F+E V+ M + D N+LI+ YL
Sbjct: 233 FHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYL 292
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ G + A R+F+ M +DVV+W +++D Y + G + AR + D+MPE+N V+W +V
Sbjct: 293 RKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVAR 352
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + ++ L+ M G N + + AC R G ++H + +
Sbjct: 353 HEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNN 412
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ + +++I MY + ++ +A +F +P
Sbjct: 413 VFVSSALIDMYCKCK-------------------------------QLPDAQMIFYSLPQ 441
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K+ V W ++I+G+S+ + ++ ELF MP ++ +W +IISG+ N Q+ +A + F M
Sbjct: 442 KNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAM 501
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L P ++T SSVL A A+ +L G +HA ++K+ ++ + + +L +Y+K G++
Sbjct: 502 LASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDL 561
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ R+F + +RN V++ +MI G A+NG EE++ LF M G+ PN+ TFL++L AC
Sbjct: 562 DSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFAC 621
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVE YF+ M+ I P +HY CMVD+L RAG LAEA DL+ + +
Sbjct: 622 SHSGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANS 680
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W ALL A + N ++ + AA+ L EL+ D+ YV+LS++Y+ GK +D +R+ K
Sbjct: 681 WAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKG 740
Query: 563 KRIRKSPGCSWIILKDKVHLFLA 585
++K GCSW+ ++ + F +
Sbjct: 741 INLKKDGGCSWVQIRGQYQAFFS 763
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 199/407 (48%), Gaps = 63/407 (15%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
++ ++K G A R+F+ M E+ VV++ +MVD K+G V +A E++ + P +V +
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
TAM+ G++ + +D +F M G++ N ITL + +AC + + + GL +
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMK 273
Query: 197 FG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
D ++ + NS+IT+Y R G D A ++F M RD VSW +L+ Y G++E A R
Sbjct: 274 SNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARR 333
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+ + MP ++ VSW T++ KGN ++++ L++
Sbjct: 334 VLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYS-------------------------- 367
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+ML RPN SSVL A A+ L G +IH +KM ++V + ++L+ +
Sbjct: 368 -----QMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDM 422
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK----------- 424
Y KC + DA IF ++ ++NIV +NS+ISG++ N EA LF+KM
Sbjct: 423 YCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSII 482
Query: 425 --------------------DEGLVPNQITFLSVLSACNHVGLVEEG 451
G P +ITF SVL AC + +E G
Sbjct: 483 SGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG 529
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 144/300 (48%), Gaps = 38/300 (12%)
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF----SMMSKRDAVSWNSLISG 243
+ H LVS G D + + ++T Y + + F S++ +++ ++
Sbjct: 100 IHAHALVS--GLTADGSVASHLLTAYAAFARAADRDGAFRDCVSVVGAASPFAYDFMVRE 157
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
+V G+I A RLF+ MP + VS+TTM+ +G++ ++EL+ P +TA+I
Sbjct: 158 HVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMI 217
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN-M 362
+GFV NE ++A F EML V PN++TL SV+ A + I +K N +
Sbjct: 218 AGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLL 277
Query: 363 ESDVSIQNSLVSL-------------------------------YSKCGNVVDAYRIFTN 391
+ ++ ++NSL++L Y++ G++ A R+
Sbjct: 278 DKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDE 337
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ ERN VS+ ++++ Q G +EA++L+ +M +G PN F SVL AC + + G
Sbjct: 338 MPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSG 397
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/617 (29%), Positives = 312/617 (50%), Gaps = 71/617 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRR-------GM 53
M +R+ SY M+ AL+ S+ +A E++ P+ + + AMI GFV G+
Sbjct: 174 MPERSVVSYTTMVDALMKRG-SVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGV 232
Query: 54 FYEAEELYVN-----------------------------MPARWRDSVCS--NALISGYL 82
F+E V+ M + D N+LI+ YL
Sbjct: 233 FHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYL 292
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ G + A R+F+ M +DVV+W +++D Y + G + AR + D+MPE+N V+W +V
Sbjct: 293 RKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVAR 352
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + ++ L+ M G N + + AC R G ++H
Sbjct: 353 HEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIH----------- 401
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
N+ M + ++LI Y ++ +A +F +P
Sbjct: 402 --------------------NQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQ 441
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K+ V W ++I+G+S+ + ++ ELF MP ++ +W +IISG+ N Q+ +A + F M
Sbjct: 442 KNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAM 501
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
L P ++T SSVL A A+ +L G +HA ++K+ ++ + + +L +Y+K G++
Sbjct: 502 LASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDL 561
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ R+F + +RN V++ +MI G A+NG EE++ LF M G+ PN+ TFL++L AC
Sbjct: 562 DSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFAC 621
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVE YF+ M+ I P +HY CMVD+L RAG LAEA DL+ + +
Sbjct: 622 SHSGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANS 680
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W ALL A + N ++ + AA+ L EL+ D+ YV+LS++Y+ GK +D +R+ K
Sbjct: 681 WAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKG 740
Query: 563 KRIRKSPGCSWIILKDK 579
++K GCSW+ ++D+
Sbjct: 741 INLKKDGGCSWVQIRDE 757
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 199/407 (48%), Gaps = 63/407 (15%)
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
++ ++K G A R+F+ M E+ VV++ +MVD K+G V +A E++ + P +V +
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
TAM+ G++ + +D +F M G++ N ITL + +AC + + + GL +
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMK 273
Query: 197 FG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
D ++ + NS+IT+Y R G D A ++F M RD VSW +L+ Y G++E A R
Sbjct: 274 SNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARR 333
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+ + MP ++ VSW T++ KGN ++++ L++
Sbjct: 334 VLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYS-------------------------- 367
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+ML RPN SSVL A A+ L G +IH +KM ++V + ++L+ +
Sbjct: 368 -----QMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDM 422
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK----------- 424
Y KC + DA IF ++ ++NIV +NS+ISG++ N EA LF+KM
Sbjct: 423 YCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSII 482
Query: 425 --------------------DEGLVPNQITFLSVLSACNHVGLVEEG 451
G P +ITF SVL AC + +E G
Sbjct: 483 SGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG 529
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 145/300 (48%), Gaps = 38/300 (12%)
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF----SMMSKRDAVSWNSLISG 243
+ H LVS G D + + ++T Y + + F S++ +++ ++
Sbjct: 100 IHAHALVS--GLTADGSVASHLLTAYAAFARAADRDGAFRDCVSVVGAASPFAYDFMVRE 157
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
+V G+I A RLF+ MP + VS+TTM+ +G++ ++EL+ P +TA+I
Sbjct: 158 HVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMI 217
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN-M 362
+GFV NE ++A F EML V PN++TL SV+ A + I +K N +
Sbjct: 218 AGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLL 277
Query: 363 ESDVSIQNSLVSLYSKCGN---------------------VVDAY----------RIFTN 391
+ ++ ++NSL++LY + G+ ++D Y R+
Sbjct: 278 DKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDE 337
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ ERN VS+ ++++ Q G +EA++L+ +M +G PN F SVL AC + + G
Sbjct: 338 MPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSG 397
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 204/627 (32%), Positives = 327/627 (52%), Gaps = 53/627 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSV--------C 73
++ +A+ +F M RN S+ ++ G+ ++G F EA LY M W V C
Sbjct: 144 NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRM--LWVGGVKPDVYTFPC 201
Query: 74 SNALISGYLKVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
G + R E + E D+ +++ Y K G V AR +FD+MP ++
Sbjct: 202 VLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+++W AM+ GY + +G LF +MR + + +TLT + AC R G +H
Sbjct: 262 IISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V GF DI + NS+ MY G EA K+FS M +D VSW ++ISGY +N E+
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEK 381
Query: 253 A---YRLFERMPGK-DFVSWTTMITGFSSKGNLEKSIEL--------------------- 287
A YR+ ++ K D ++ +++ ++ G+L+ +EL
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 288 --------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
F+ +P K+ ++WT+II+G N + EA +F +M + ++PN +T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM-KMTLQPNAIT 500
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L++ L+A A L G +IHAHV++ + D + N+L+ +Y +CG + A+ F N
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQF-NSQ 559
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
++++ S+N +++G+++ G G + LF +M + P++ITF+S+L C +V +G +
Sbjct: 560 KKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLM 619
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
YF M+ Y + P +HYAC+VD+LGRAG L EA I M P P VWGALL A R H
Sbjct: 620 YFSKMEE-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH 678
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N+DL +L+AQ + EL+ S Y++L +LY+ GK R+ +VR K + GCSW
Sbjct: 679 HNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSW 738
Query: 574 IILKDKVHLFLAGRKSCLDLKEIEVTL 600
+ +K KVH FL+ K KEI L
Sbjct: 739 VEVKGKVHAFLSDDKYHPQTKEINTVL 765
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 193/396 (48%), Gaps = 70/396 (17%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NA ++ +++ G +A +F M E+++ +W +V GY K+G EA ++ +M
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRM------ 186
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W GG+ + T + CG G +VH V
Sbjct: 187 LWV------------------------GGVKPDVYTFPCVLRTCGGIPDLARGREVHVHV 222
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
R+G++ DI + N++ITMY + G + A +F M +RD +SWN++ISGY NG E
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGL 282
Query: 255 RLFERMPG----KDFVSWTTMI---------------------TGFSSK----------- 278
+LF M G D ++ T++I TGF+
Sbjct: 283 KLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 279 ---GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
G+ ++ +LF+ M KD V+WT +ISG+ N E+A + M + V+P+++T++
Sbjct: 343 LYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVA 402
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VLSA A L+ G ++H +K + S V + N+L+++YSKC + A IF NI +
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
N++S+ S+I+G N EAL FR+MK L PN
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFFRQMK-MTLQPN 497
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 164/343 (47%), Gaps = 40/343 (11%)
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
E+ L SM+ +A + L C + EG +V+ + + LGN+
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNA 134
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------- 260
+ M+ R G + +A VF MS+R+ SWN L+ GY G +EA L+ RM
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKP 194
Query: 261 -------------------PGK-------------DFVSWTTMITGFSSKGNLEKSIELF 288
G+ D +IT + G+++ + LF
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ MP +D ++W A+ISG+ N E + F M V P+ +TL+SV+SA
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G IHA+V+ D+S+ NSL +Y G+ +A ++F+ +D ++IVS+ +MISG+
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYE 374
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
N L E+A++ +R M + + P++IT +VLSAC +G ++ G
Sbjct: 375 YNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 312/589 (52%), Gaps = 44/589 (7%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVN-----MPARWRD---SVCSNALISGYLKVGRCE 88
NA A M+ GF+R G A L+ +PA R +V + S + C
Sbjct: 96 NAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATTSSSPAEAIHCV 155
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
R F + + V+ ++V Y + +AR++FD+M +++VV+WT +VDGY +
Sbjct: 156 AFKRGF---IGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGL 212
Query: 149 FEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
++ + +F M G + N +TL A G+ G VH V G + L N
Sbjct: 213 PDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLEN 272
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS 267
+++ M+G+ G + A ++F + MP KD S
Sbjct: 273 ALVDMFGKCGCVASAKEIF-------------------------------DGMPIKDVYS 301
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
WT+M++ ++ G+LE + +LF +P ++ V+W+ +++ + EEA R F +M+ V
Sbjct: 302 WTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGV 361
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIH-AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
P TL SVLSA A L+ G ++ A++V +E V++ N+ + +++KCG+V A
Sbjct: 362 EPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAAS 421
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
R+F N++++N+VS+N+MI A +G EEAL+LF+K K G+ P++IT++ VLSAC+H G
Sbjct: 422 RLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSG 481
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
LV EG +FK MK +Y IEP EHYACM+D+LG+ G L EA ++ SM WGAL
Sbjct: 482 LVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGAL 541
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
L A R H N+++ K AA L+ L+P + YV++S +Y+ K +R + + ++
Sbjct: 542 LNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVK 601
Query: 567 KSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKH 615
K+PGCS I + K H FLA S ++I L+ I +K + H
Sbjct: 602 KNPGCSSIEVDGKFHEFLAADVSHAHSEDIYAALENIYLHSKLEGYISH 650
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 26/274 (9%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+ +M++A + A ++F +P RNAVS++ M+ + + + EA ++ +M A
Sbjct: 301 SWTSMVSAYAKCG-DLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAA 359
Query: 68 WRD-------SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ SV S G L VGRC A I VE V + +D + K G V
Sbjct: 360 GVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGA 419
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F M +KNVV+W M+ + E+ LF + G+ + IT + AC
Sbjct: 420 ASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSH 479
Query: 181 FFRYREGVQVHGLVSRFGF-DYDIILG--------NSIITMYGRLGFMDEANKVF-SMMS 230
EG R+ F + I+ G +I + G++G ++EA +V SM
Sbjct: 480 SGLVSEG--------RYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPV 531
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
D W +L++ +G +E +++ G D
Sbjct: 532 GADEAGWGALLNACRMHGNVEIGKCAADKLVGLD 565
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/519 (34%), Positives = 277/519 (53%), Gaps = 37/519 (7%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE-KNVVAWTAMVDGYMKVDCF 149
A++ + ++ G ++ Y + AR +FD+ P + W M+ Y K
Sbjct: 76 AQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSS 135
Query: 150 EDGFDLFLSMRRGG--MAFNSITLTILFEACGRFFRYRE-GVQVHGLVSRFGFDYDIILG 206
++ LF M G + + T T +F AC R R G VHG+V + G++ DI +G
Sbjct: 136 QESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVG 195
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV 266
NS++ MY +FS M +A R+F+ MP +D +
Sbjct: 196 NSLVNMY----------SIFSRMV---------------------DAKRVFDEMPQRDVI 224
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+WT+++ G++ +G L ++ ELF+MMP ++DV+W +++G+V + Y EA + F +ML D
Sbjct: 225 TWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHD 284
Query: 327 -VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
V+PN+ L S+LSA A L+QG IH ++ K + +I +L+ +Y+KCG + A
Sbjct: 285 EVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCA 344
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
R+F + +R+++++ SMISG + +GLG E L F +M EG P+ IT L VL+ C+H
Sbjct: 345 RRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHS 404
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GLVEEG F M L+ I P EHY C++D+LGRAG L A + I SM EP W A
Sbjct: 405 GLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRA 464
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDS-ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKR 564
LL A R H ++DL + H+ EL P S YV+LS+LY+ +G+ +VR +
Sbjct: 465 LLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRG 524
Query: 565 IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
PGCSWI + VH FLA K + EI L +
Sbjct: 525 SEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEV 563
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 153/336 (45%), Gaps = 13/336 (3%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N+L++ Y R +A R+F+ M ++DV+ W S+V GY +G ++ ARE+FD MP
Sbjct: 191 DIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMP 250
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEACGRFFRYREGV 188
+N V+W MV GY+ + + F M + N L + AC +G
Sbjct: 251 GRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGK 310
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+H + + + ++I MY + G +D A +VF + KRD ++W S+ISG +G
Sbjct: 311 WIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHG 370
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELF-NMMPEKDDVT----W 299
E F M + F ++ ++ G S G +E+ + +F +M+P V +
Sbjct: 371 LGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHY 430
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+I + E AF M + P+ + ++LSA ++ G +I H+ +
Sbjct: 431 GCLIDLLGRAGRLESAFEAIKSM---PMEPDVVAWRALLSACRIHGDVDLGERIINHIAE 487
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+ S L +LY+ G ++ + +R
Sbjct: 488 LCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQR 523
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 131/288 (45%), Gaps = 19/288 (6%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN-----AL 77
+ A E+F MP RN VS+A M+ G+V + EA + + +M D V N ++
Sbjct: 239 LVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLC--HDEVKPNEAVLVSI 296
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDVVAWGS-----MVDGYCKKGRVIEAREIFDKMPEKN 132
+S +G ++ I ++K+ + S ++D Y K GR+ AR +FD + +++
Sbjct: 297 LSACAHLGALDQGKWI-HVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRD 355
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV-H 191
++ WT+M+ G + F M G + ITL + C EG+ + H
Sbjct: 356 LLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFH 415
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEI 250
++ +G + +I + GR G ++ A + SM + D V+W +L+S +G++
Sbjct: 416 DMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDV 475
Query: 251 EEAYRLF----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+ R+ E PG + + ++S G E ++ M ++
Sbjct: 476 DLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQR 523
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE-RNIVSYNSMI 404
+L Q QIHA VV + + S+ L+ Y C N+ A +F + +N MI
Sbjct: 67 SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMI 126
Query: 405 SGFAQNGLGEEALNLFRKMKDEG--LVPNQITFLSVLSACN 443
+++ +E+L LF +M G ++ TF V +AC+
Sbjct: 127 QAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACS 167
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/574 (32%), Positives = 299/574 (52%), Gaps = 50/574 (8%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N L+ Y+ +A ++ M + VV++ +++ GY K G V EA ++FD +++
Sbjct: 54 NILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCH 113
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W ++ G +K +G F+ MR + ++ T I+ C F G QVH +
Sbjct: 114 SWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCCDLGF----GQQVHADI 169
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ D D +G +++ MY +G + +A KVF M R V+WN++IS Y G +++
Sbjct: 170 VKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSI 229
Query: 255 RLF---------------------------------------ERMPGKDFVSWTTMITGF 275
LF ER D + ++ +
Sbjct: 230 GLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLY 289
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
S G + + LF +P++D V+WT II GF+ + EEA F +M D+ PN T
Sbjct: 290 SKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFG 349
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+L A A +G H V+K + +DV + +++V +YSKCG + DA R F + E
Sbjct: 350 GLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPE 409
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKM---KDEGLVPNQITFLSVLSACNHVGLVEEG 451
R+I S+N +I G+AQNG G +AL L+ +M G+ PN++TF+ VL AC+H GL++EG
Sbjct: 410 RDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEG 469
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
+ YFK M + I+P EHY CMVD+LGRAG L EA LI ++ +P +WGALLGA +
Sbjct: 470 YSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACK 529
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
H ++ + + A+HL EP +++ YV+L++ Y+ IG+ + +R + + + K+ GC
Sbjct: 530 LHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEKTAGC 589
Query: 572 SWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
SW+ + +H FLAG +IEV Q + +
Sbjct: 590 SWVEIGTCMHSFLAGDXL---HPQIEVASQVLPR 620
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/564 (22%), Positives = 230/564 (40%), Gaps = 118/564 (20%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N ++ A IN+ ++ +A ++ MP + VSY +++G+ + G+ EA +L+ R
Sbjct: 54 NILLQAYINSQ-ALSDAHKLLHFMPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTSK--R 110
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAM--------------------------VEKDVV 103
D N ++SG +K + E F M V D+V
Sbjct: 111 DCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCCDLGFGQQVHADIV 170
Query: 104 AWGSMVDG---------YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
S +D Y + G + +AR++FD MP + +V W AM+ Y K +
Sbjct: 171 KVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIG 230
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
LF + R G++ + T I+ ++ E +QVH L+ GF D N+++ +Y
Sbjct: 231 LFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYS 290
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------- 261
+ G++ A+++F + +D VSW +I G++ +G +EEA LF +M
Sbjct: 291 KCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGG 350
Query: 262 ---------------------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
G D V + ++ +S G + ++ F MPE+
Sbjct: 351 LLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPER 410
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEML---RKDVRPNQLTLSSVLSASAATATLNQGS 351
D +W II G+ N +A + + EM+ + PN++T VL A + L +G
Sbjct: 411 DIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEG- 469
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
YS +VD + I + Y M+ + G
Sbjct: 470 ------------------------YSYFKEMVDKHLIKPTAEH-----YTCMVDLLGRAG 500
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GPEH 470
L +EA L + + P+ + + ++L AC G V+ + ++ + LY EP +
Sbjct: 501 LLQEAEALILALP---IKPDNVMWGALLGACKLHGDVQ---MTRRTAEHLYTNEPRNSSN 554
Query: 471 YACMVDILGRAGSLAEAIDLINSM 494
Y + + G EA+++ M
Sbjct: 555 YVLLANSYTDIGEWGEAVEIREVM 578
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 156/353 (44%), Gaps = 68/353 (19%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + + G + N ++ Y + +A+K+ M + VS+N+++SGY G
Sbjct: 37 LHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGL 96
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+ EA +LF+ +D SW ++SG V N
Sbjct: 97 VSEAIKLFDGTSKRDCHSWNI-------------------------------VLSGCVKN 125
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
+ E F++M VRP+ T + ++ L G Q+HA +VK+ + D I
Sbjct: 126 HKLGEGLTHFMKMRCSSVRPDNFTYAIIIPC----CDLGFGQQVHADIVKVCSDLDAFIG 181
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+L+ +Y++ G + DA ++F + R +V++N+MIS +++ G G++++ LFR++ EG+
Sbjct: 182 TNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGIS 241
Query: 430 PNQITFLSVLSACN-----------HVGLVEEGFI-----------------YFKSMKTL 461
++ T+ VL+ H ++E GF Y S L
Sbjct: 242 ADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRL 301
Query: 462 YNIEPGPEHYACMVDILG--RAGSLAEAIDLINSMTF---EPPPGVWGALLGA 509
+ P + + V I+G ++G + EA+ L M EP +G LLGA
Sbjct: 302 FEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGA 354
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/560 (32%), Positives = 305/560 (54%), Gaps = 46/560 (8%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ Y KG + EAR +FD+MPE++VVAWT M+ GY + + +F M +
Sbjct: 48 TLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDP 107
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF-MDEANKV 225
N+ T++ + +AC G VHGL + G D I + N+++ MY MD+A V
Sbjct: 108 NAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMV 167
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGN- 280
F + ++ VSW +LI+GY H + R+F +M ++ S++ + +S G+
Sbjct: 168 FRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSH 227
Query: 281 --------------LEKSIELFNM--------------------MPEKDDVTWTAIISGF 306
E ++ + N M ++D +TW +I+G+
Sbjct: 228 TFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGY 287
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+ E + F M + PN T +S+++A A A LN G QIH +++ ++ ++
Sbjct: 288 ERSNPTESLYV-FSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNL 346
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
++ N+L+ +YSKCGN+ D++++F + R++VS+ +M+ G+ +G GEEA+ LF KM
Sbjct: 347 ALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRS 406
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G+ P+++ F+++LSAC+H GLV+EG YFK M YNI P E Y C+VD+LGRAG + E
Sbjct: 407 GIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEE 466
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A +LI SM F+P VWG LGA + H +L KLAA +++L P A YV+LS++Y+
Sbjct: 467 AYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAA 526
Query: 547 IGKKRDGNRVRMKKKLKRI--RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
GK G R++K +KR+ +K G SW+ + + V+ F+ G + ++ I L+ +
Sbjct: 527 DGKW--GEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLI 584
Query: 605 KGTKEFDW-PKHDWSLLGLE 623
KE + P D + LE
Sbjct: 585 GHMKESGYVPDLDCLIYDLE 604
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 182/419 (43%), Gaps = 52/419 (12%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNAL-ISGY 81
I EA +F MP R+ V++ MI G+ A ++ M D NA IS
Sbjct: 59 IGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDP---NAFTISSV 115
Query: 82 LKVGR---CEEAARIFEAMVEKD-----VVAWGSMVDGYCKKGRVIE-AREIFDKMPEKN 132
LK + C R+ + K + +++D Y ++ A +F + KN
Sbjct: 116 LKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKN 175
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
V+WT ++ GY D G +F M + N + +I AC + G Q+H
Sbjct: 176 EVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHA 235
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V++ GF+ ++ + NSI+ MY R EAN+ F M++RD ++WN+LI+GY + E
Sbjct: 236 AVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNPTES 295
Query: 253 AY--------------------------------------RLFERMPGKDFVSWTTMITG 274
Y R+ R + +I
Sbjct: 296 LYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDM 355
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+S GN+ S ++F M +D V+WTA++ G+ + EEA F +M+R +RP+++
Sbjct: 356 YSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVF 415
Query: 335 SSVLSASAATATLNQGSQIHAHVV-KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
++LSA + +++G + +V N+ D I +V L + G V +AY + ++
Sbjct: 416 MAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESM 474
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 138/288 (47%), Gaps = 41/288 (14%)
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--- 260
+L ++I Y G + EA +F M +RD V+W +I+GY A+ +F M
Sbjct: 44 VLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNE 103
Query: 261 ----------------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----------- 293
G +S+ ++ G + K L+ I + N + +
Sbjct: 104 ELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDD 163
Query: 294 ----------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
K++V+WT +I+G+ + + R F +ML ++V N + S + A +
Sbjct: 164 ACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTS 223
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+ G Q+HA V K ES++ + NS++ +Y +C +A R F +++R+++++N++
Sbjct: 224 IGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTL 283
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
I+G+ ++ E+L +F M+ EG PN TF S+++AC + + G
Sbjct: 284 IAGYERSN-PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCG 330
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 32/219 (14%)
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
+ K +V +LI Y G I EA LF+ MP +D V+WT MI G++S N
Sbjct: 38 IPKGPSVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNN-------- 89
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ A+ F EM+ +++ PN T+SSVL A L+
Sbjct: 90 -----------------------HTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLS 126
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG-NVVDAYRIFTNIDERNIVSYNSMISGF 407
G +H +K ++ + + N+L+ +Y+ C ++ DA +F I +N VS+ ++I+G+
Sbjct: 127 YGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGY 186
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
G L +FR+M E + N +F + AC +G
Sbjct: 187 THRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIG 225
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 11 AMITALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--P 65
A+ ALI+ + C +I ++ ++F M R+ VS+ AM+ G+ G EA EL+ M
Sbjct: 347 ALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRS 406
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIE 120
D V A++S G +E R F+ MV D +G +VD + G+V E
Sbjct: 407 GIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEE 466
Query: 121 AREIFDKMPEK 131
A E+ + MP K
Sbjct: 467 AYELIESMPFK 477
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 315/587 (53%), Gaps = 38/587 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLK 83
A+++F +P + V + MI G+ + E LY+NM DS L++G +
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 84 VGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
G + V K ++ ++V Y G + AR +FD+ +++V +W
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY ++ +E+ +L + M R ++ S+TL ++ AC + +VH VS
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ + L N+ L++ Y GE++ A R+F
Sbjct: 267 TEPSLRLENA-------------------------------LVNAYAACGEMDIAVRIFR 295
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
M +D +SWT+++ G+ +GNL+ + F+ MP +D ++WT +I G++ + E+
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F EM + P++ T+ SVL+A A +L G I ++ K +++DV + N+L+ +Y K
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFK 415
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG A ++F ++D+R+ ++ +M+ G A NG G+EA+ +F +M+D + P+ IT+L V
Sbjct: 416 CGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGV 475
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSACNH G+V++ +F M++ + IEP HY CMVD+LGRAG + EA +++ M P
Sbjct: 476 LSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNP 535
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
VWGALLGA R H + +A+LAA+ ++ELEPD+ Y +L ++Y+ + +D VR
Sbjct: 536 NSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRR 595
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
K I+K+PG S I + H F+AG KS L +EI + L+ +++
Sbjct: 596 KIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 13/236 (5%)
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K FV W + + G ++ + +LF +PE D V W +I G+ + E R ++ M
Sbjct: 71 KLFVFWCSRLGG-----HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM 125
Query: 323 LRKDVRPNQLTLSSVLSA-SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
L++ V P+ T +L+ L G ++H HVVK + S++ +QN+LV +YS CG
Sbjct: 126 LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGL 185
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ A +F + ++ S+N MISG+ + EE++ L +M+ + P +T L VLSA
Sbjct: 186 MDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSA 245
Query: 442 CNHV---GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
C+ V L + Y KT EP +V+ G + A+ + SM
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKT----EPSLRLENALVNAYAACGEMDIAVRIFRSM 297
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK--CGNVVDAYRIFTNI 392
S +S T +Q Q+H+ + + + + Q L + G+V AY++F I
Sbjct: 35 SRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKI 94
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
E ++V +N+MI G+++ E + L+ M EG+ P+ TF +L+ G
Sbjct: 95 PEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDG 148
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/478 (35%), Positives = 269/478 (56%), Gaps = 40/478 (8%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ C + ++G +H + F+ D++L N I+ MY + G ++EA +F M +D
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSWTTMITG------------- 274
VSW LISGY +G+ EA LF +M P + +S +G
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230
Query: 275 FSSK--------------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
FS K ++ ++ +FN + K+ V+W A+I+G + E
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
R F++MLR+ P T SSV +A A++ +L QG +HAHV+K + I N+L+
Sbjct: 291 VMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 350
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+K G++ DA ++F + +++IVS+NS+ISG+AQ+GLG EAL LF +M + PN+IT
Sbjct: 351 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 410
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
FLSVL+AC+H GL++EG YF+ MK + IE H+ +VD+LGRAG L EA I M
Sbjct: 411 FLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEM 469
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
+P VWGALLG+ R H N+DL AA+ + EL+P + P+V+LS++Y+ G+ D
Sbjct: 470 PIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAA 529
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+VR K ++K P CSW+ ++++VH+F+A S +EI+ + IS KE +
Sbjct: 530 KVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGY 587
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 176/343 (51%), Gaps = 40/343 (11%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
LK GR A I + E D+V +++ Y K G + EA+++FDKMP K++V+WT ++
Sbjct: 121 LKQGRAIHA-HIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLIS 179
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY + + LF M G N TL+ L +A G G Q+H ++G+D
Sbjct: 180 GYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDM 239
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++ +G+S++ MY R M EA +F+ ++ ++ VSWN+LI+G+ GE E RLF +M
Sbjct: 240 NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQML 299
Query: 262 GKDF----VSWTTMITGFSSKGNLEK---------------------------------- 283
+ F +++++ T +S G+LE+
Sbjct: 300 RQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIK 359
Query: 284 -SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+ ++F + ++D V+W +IISG+ + EA + F +ML+ V+PN++T SVL+A +
Sbjct: 360 DAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACS 419
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ L++G + K +E+ V+ ++V L + G + +A
Sbjct: 420 HSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEA 462
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 180/395 (45%), Gaps = 28/395 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNAL-ISG 80
S+ EA ++F MP ++ VS+ +I+G+ + G EA L+ P N +S
Sbjct: 155 SLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALF---PKMLHLGFQPNEFTLSS 211
Query: 81 YLK---VGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
LK G + R A K +V S++D Y + + EA+ IF+ + KN
Sbjct: 212 LLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKN 271
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VV+W A++ G+ + E LFL M R G T + +F AC +G VH
Sbjct: 272 VVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHA 331
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V + G +GN++I MY + G + +A KVF + K+D VSWNS+ISGY +G E
Sbjct: 332 HVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE 391
Query: 253 AYRLFERM------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAI 302
A +LFE+M P + +++ +++T S G L++ F +M E +
Sbjct: 392 ALQLFEQMLKAKVQPNE--ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTV 449
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
+ + EA ++ EM ++P ++L + ++ G + +++
Sbjct: 450 VDLLGRAGRLNEANKFIEEM---PIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELD- 505
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
D L ++Y+ G + DA ++ + E +
Sbjct: 506 PHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV 540
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+ P + S +L+ L QG IHAH+ E D+ + N ++++Y+KCG++ +A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA----- 441
+F + +++VS+ +ISG++Q+G EAL LF KM G PN+ T S+L A
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 442 CNHVGLVEEGFIYFKSMKTLY--NIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+H G F S+K Y N+ G + ++D+ R + EA + NS+
Sbjct: 221 SDHHGRQLHAF----SLKYGYDMNVHVG----SSLLDMYARWAHMREAKVIFNSLA 268
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/493 (33%), Positives = 280/493 (56%), Gaps = 32/493 (6%)
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
++ V DV S++ Y G + A ++F + EK+VV+W +M++G+++ + +
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
LF M + + +T+ + AC + G QV + + ++ L N+++ MY
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
+ G IE+A RLF+ M KD V+WTTM+ G
Sbjct: 279 KCG-------------------------------SIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM-LRKDVRPNQLT 333
++ + E + E+ N MP+KD V W A+IS + N + EA F E+ L+K+++ NQ+T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L S LSA A L G IH+++ K + + + ++L+ +YSKCG++ + +F +++
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+R++ +++MI G A +G G EA+++F KM++ + PN +TF +V AC+H GLV+E
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
F M++ Y I P +HYAC+VD+LGR+G L +A+ I +M P VWGALLGA + H
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
NL+LA++A L+ELEP + +V+LS++Y+ +GK + + +R ++ ++K PGCS
Sbjct: 548 ANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSS 607
Query: 574 IILKDKVHLFLAG 586
I + +H FL+G
Sbjct: 608 IEIDGMIHEFLSG 620
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 186/404 (46%), Gaps = 55/404 (13%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP------------------AR 67
A ++F T+ ++ VS+ +MI GFV++G +A EL+ M A+
Sbjct: 185 ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAK 244
Query: 68 WRD-----SVCS--------------NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
R+ VCS NA++ Y K G E+A R+F+AM EKD V W +M
Sbjct: 245 IRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM 304
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFN 167
+DGY ARE+ + MP+K++VAW A++ Y + + +F ++ + M N
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLN 364
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
ITL AC + G +H + + G + + +++I MY + G ++++ +VF+
Sbjct: 365 QITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK 283
+ KRD W+++I G +G EA +F +M + V++T + S G +++
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 284 SIELFNMM-------PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
+ LF+ M PE+ A I + Y E FIE + + P+ +
Sbjct: 485 AESLFHQMESNYGIVPEEKHY---ACIVDVLGRSGYLEKAVKFIEAM--PIPPSTSVWGA 539
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+L A A LN ++++ +D L ++Y+K G
Sbjct: 540 LLGACKIHANLNLAEMACTRLLELEPRND-GAHVLLSNIYAKLG 582
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 125/227 (55%), Gaps = 8/227 (3%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPN 330
+ SS +LE + ++F+ +P+ + W +I + + + F++M+ + PN
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ T ++ A+A ++L+ G +H VK + SDV + NSL+ Y CG++ A ++FT
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
I E+++VS+NSMI+GF Q G ++AL LF+KM+ E + + +T + VLSAC + +E
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 451 G---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
G Y + + N+ M+D+ + GS+ +A L ++M
Sbjct: 251 GRQVCSYIEENRVNVNLTLA----NAMLDMYTKCGSIEDAKRLFDAM 293
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 295/537 (54%), Gaps = 40/537 (7%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
S+V Y K RV AR++FD+M E++V++W ++++GY+ E G +F+ M G+
Sbjct: 84 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 143
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T+ +F C G VH + + F + N+++ MY + G +D A VF
Sbjct: 144 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 203
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------- 261
MS R VS+ S+I+GY G EA +LFE M
Sbjct: 204 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 263
Query: 262 -GKDFVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
GK W ++ ++ G+++++ +F+ M KD ++W II G+
Sbjct: 264 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 323
Query: 308 NNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N EA F +L K P++ T++ VL A A+ + ++G +IH ++++ SD
Sbjct: 324 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 383
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ NSLV +Y+KCG ++ A+ +F +I +++VS+ MI+G+ +G G+EA+ LF +M+
Sbjct: 384 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 443
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G+ ++I+F+S+L AC+H GLV+EG+ +F M+ IEP EHYAC+VD+L R G L +
Sbjct: 444 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 503
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A I +M P +WGALL R H ++ LA+ A+ + ELEP++ YV+++++Y+
Sbjct: 504 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 563
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K R+R + + +RK+PGCSWI +K +V++F+AG S + + IE L+ +
Sbjct: 564 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 620
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 185/367 (50%), Gaps = 40/367 (10%)
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD++ + + W +++ K F LF M G+ +S T + + ++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
G Q+HG + + GF +GNS++ Y + +D A KVF M++RD +SWNS+I+GY
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 245 VHNGEIEEAYRLFERM--------------------------PGKDFVS----------- 267
V NG E+ +F +M G+ S
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 268 --WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
T++ +S G+L+ + +F M ++ V++T++I+G+ EA + F EM +
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ P+ T+++VL+ A L++G ++H + + ++ D+ + N+L+ +Y+KCG++ +A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG-LVPNQITFLSVLSACNH 444
+F+ + ++I+S+N++I G+++N EAL+LF + +E P++ T VL AC
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360
Query: 445 VGLVEEG 451
+ ++G
Sbjct: 361 LSAFDKG 367
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 142/277 (51%), Gaps = 17/277 (6%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLKVGR 86
+F M R+ VSY +MI G+ R G+ EA +L+ M D A+++ +
Sbjct: 202 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 261
Query: 87 CEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+E R+ E + E D+ +++D Y K G + EA +F +M K++++W ++ G
Sbjct: 262 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 321
Query: 143 YMKVDCFEDG----FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
Y K +C+ + F+L L +R + + T+ + AC + +G ++HG + R G
Sbjct: 322 YSK-NCYANEALSLFNLLLEEKR--FSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 378
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ D + NS++ MY + G + A+ +F ++ +D VSW +I+GY +G +EA LF
Sbjct: 379 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 438
Query: 259 RMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMM 291
+M D +S+ +++ S G +++ FN+M
Sbjct: 439 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 475
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 101/271 (37%), Gaps = 59/271 (21%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVS-----YAAMITGFVRRGMFYEAEEL-- 60
S+N +I + NC EA +F + S A ++ F + E+
Sbjct: 314 SWNTIIGGY-SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 372
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y+ + D +N+L+ Y K G A +F+ + KD+V+W M+ GY G E
Sbjct: 373 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 432
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG- 179
A +F++ MR+ G+ + I+ L AC
Sbjct: 433 AIALFNQ-------------------------------MRQAGIEADEISFVSLLYACSH 461
Query: 180 --------RFFR-YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
RFF R ++ V + I+ M R G + +A + M
Sbjct: 462 SGLVDEGWRFFNIMRHECKIEPTVEHYA---------CIVDMLARTGDLIKAYRFIENMP 512
Query: 231 -KRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
DA W +L+ G + +++ A ++ E++
Sbjct: 513 IPPDATIWGALLCGCRIHHDVKLAEKVAEKV 543
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 309/604 (51%), Gaps = 57/604 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-------PARWR----DS 71
++ A ++F + R + Y MI ++ +G ++EA ++++ M P +
Sbjct: 71 VHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIK 130
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
CS L+ Y GR + + S++ Y G V EAR++FD M EK
Sbjct: 131 ACSELLLVEY---GRVLHGLTLVSKF-GSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEK 186
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+VV+W M++GY K +F M G+ + ++ + ACG G +VH
Sbjct: 187 SVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVH 246
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
GLV I+ N+++ MY + G MDEA VF M +RD VSW S+I+GY+ NG+ +
Sbjct: 247 GLVEEKVLGKKIV-SNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAK 305
Query: 252 EAYRLFERMP--------------------------GKDFVSW-------------TTMI 272
A LF+ M G+ W T++I
Sbjct: 306 SALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLI 365
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++ L S +F K V W A++SG V+N+ EA F +ML + V N
Sbjct: 366 DMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAA 425
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T +S+L A A L + I++++++ S++ + SL+ +YSKCG++ A++IF I
Sbjct: 426 TCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTI 485
Query: 393 --DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
D ++I ++ +I+G+ +G GE A++LF++M G+ PN +TF SVL +C+H G+V++
Sbjct: 486 PVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDD 545
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G FK M + P +HY CMVD+LGRAG + EA DLI +M F P VWGALLGA
Sbjct: 546 GLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGAC 605
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
H N++L ++AA+ L ELEP + YV+L+ LY+ +G+ D VR + +RK+P
Sbjct: 606 VMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPA 665
Query: 571 CSWI 574
S I
Sbjct: 666 HSLI 669
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 215/443 (48%), Gaps = 68/443 (15%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAF 166
+V Y G V AR++FD++ ++ + + M+ Y+ + + +FL M
Sbjct: 61 LVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCP 120
Query: 167 NSITLTILFEACGRFFRYREGVQVHGL--VSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
++ T + +AC G +HGL VS+FG ++ NS++ MY G ++EA K
Sbjct: 121 DNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVL--NSLLAMYMNCGEVEEARK 178
Query: 225 VFSMMSKRDAVSWNSLISGYVHNG-----------------------------------E 249
VF M ++ VSWN++I+GY NG E
Sbjct: 179 VFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKE 238
Query: 250 IEEAYRLF----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
+E R+ E++ GK VS ++ ++ G+++++ +F+ M E+D V+WT++I+G
Sbjct: 239 LEVGRRVHGLVEEKVLGKKIVS-NALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMING 297
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
++ N + A F M + +RPN +T++ +L A A+ L G +H V+K + S+
Sbjct: 298 YILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSE 357
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
V+++ SL+ +Y+KC + ++ +FT + V +N+++SG N L EA+ LF+KM
Sbjct: 358 VAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLM 417
Query: 426 EGLVPNQITFLSVLSA---------CNHVG--LVEEGFIYFKSMKTLYNIEPGPEHYACM 474
EG+ N T S+L A N++ L+ GF+ NI+ +
Sbjct: 418 EGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFV--------SNIQVATS----L 465
Query: 475 VDILGRAGSLAEAIDLINSMTFE 497
+DI + GSL A + N++ +
Sbjct: 466 IDIYSKCGSLESAHKIFNTIPVD 488
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 151/312 (48%), Gaps = 34/312 (10%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML-RKDV 327
+ ++ ++ G + + +LF+ + ++ + + +I ++ Y EA + F+EML KD
Sbjct: 59 SVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDC 118
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ T V+ A + + G +H + S + + NSL+++Y CG V +A +
Sbjct: 119 CPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARK 178
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV-- 445
+F + E+++VS+N+MI+G+ +NG AL +F +M D G+ + + +SVL AC ++
Sbjct: 179 VFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKE 238
Query: 446 --------GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
GLVEE + K + +VD+ + GS+ EA + ++M E
Sbjct: 239 LEVGRRVHGLVEEKVLGKKIVSN------------ALVDMYAKCGSMDEARLVFDNMV-E 285
Query: 498 PPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
W +++ G L L K+ + L P+S T ++L S + +DG
Sbjct: 286 RDVVSWTSMINGYILNGDAKSALSLFKI--MQIEGLRPNSVTIALILLACAS-LNNLKDG 342
Query: 554 NRVR---MKKKL 562
+ MK++L
Sbjct: 343 RCLHGWVMKQRL 354
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P S+L A +L Q+HAH++ + S + I++ LV+ Y+ CG V +A ++
Sbjct: 19 PKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLS-IDIRSVLVATYAHCGYVHNARKL 77
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACNHVGL 447
F + +R + YN MI + G EA+ +F +M + P+ T+ V+ AC+ + L
Sbjct: 78 FDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLL 137
Query: 448 VEEG 451
VE G
Sbjct: 138 VEYG 141
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 315/587 (53%), Gaps = 38/587 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLK 83
A+++F +P + V + MI G+ + E LY+NM DS L++G +
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 84 VGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
G + V K ++ ++V Y G + AR +FD+ +++V +W
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY ++ +E+ +L + M R ++ S+TL ++ AC + +VH VS
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ + L N+ L++ Y GE++ A R+F
Sbjct: 267 TEPSLRLENA-------------------------------LVNAYAACGEMDIAVRIFR 295
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
M +D +SWT+++ G+ +GNL+ + F+ MP +D ++WT +I G++ + E+
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F EM + P++ T+ SVL+A A +L G I ++ K +++DV + N+L+ +Y K
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFK 415
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG A ++F ++D+R+ ++ +M+ G A NG G+EA+ +F +M+D + P+ IT+L V
Sbjct: 416 CGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGV 475
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSACNH G+V++ +F M++ + IEP HY CMVD+LGRAG + EA +++ M P
Sbjct: 476 LSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNP 535
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
VWGALLGA R H + +A+LAA+ ++ELEPD+ Y +L ++Y+ + +D VR
Sbjct: 536 NSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRR 595
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
K I+K+PG S I + H F+AG KS L +EI + L+ +++
Sbjct: 596 KIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 13/236 (5%)
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K FV W + + G ++ + +LF +PE D V W +I G+ + E R ++ M
Sbjct: 71 KLFVFWCSRLGG-----HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM 125
Query: 323 LRKDVRPNQLTLSSVLSA-SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
L++ V P+ T +L+ L G ++H HVVK + S++ +QN+LV +YS CG
Sbjct: 126 LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGL 185
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ A +F + ++ S+N MISG+ + EE++ L +M+ + P +T L VLSA
Sbjct: 186 MDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSA 245
Query: 442 CNHV---GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
C+ V L + Y KT EP +V+ G + A+ + SM
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKT----EPSLRLENALVNAYAACGEMDIAVRIFRSM 297
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK--CGNVVDAYRIFTNI 392
S +S T +Q Q+H+ + + + + Q L + G+V AY++F I
Sbjct: 35 SRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKI 94
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
E ++V +N+MI G+++ E + L+ M EG+ P+ TF +L+ G
Sbjct: 95 PEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDG 148
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 199/647 (30%), Positives = 331/647 (51%), Gaps = 48/647 (7%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-----WRDSVCSNALIS 79
EA +F + ++ V Y M+ G+ + +A ++ M D C L
Sbjct: 97 EAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCG 156
Query: 80 GYL--KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
L K GR E I E ++ +++ Y K ++ A ++F++M K++V+WT
Sbjct: 157 ENLDLKKGR-EIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWT 215
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
+V GY + + L L M+ G +S+TL + A R G +HG R
Sbjct: 216 TLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRS 275
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
GF+ + + N+++ MY + G A VF M + VSWN++I G NGE EEA+ F
Sbjct: 276 GFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATF 335
Query: 258 ERMPGKDFVSWTTMITGF----SSKGNLEK------------------------------ 283
+M + V + G ++ G+LE+
Sbjct: 336 LKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKC 395
Query: 284 -----SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+ +FN + EK +VTW A+I G+ N +EA F M + ++ + TL V+
Sbjct: 396 KRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVI 454
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+A A + Q IH V+ M+++V + +LV +Y+KCG + A ++F + ER+++
Sbjct: 455 TALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVI 514
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++N+MI G+ +G+G+E L+LF +M+ + PN ITFLSV+SAC+H G VEEG + FKSM
Sbjct: 515 TWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSM 574
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+ Y +EP +HY+ MVD+LGRAG L +A + I M +P V GA+LGA + H N++L
Sbjct: 575 QEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVEL 634
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+ AAQ L +L+PD +V+L+++Y+ +VR + K + K+PGCSW+ L++
Sbjct: 635 GEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRN 694
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLERD 625
++H F +G + + K+I L+T+ K + S+ +E D
Sbjct: 695 EIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSIHDVEED 741
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 211/441 (47%), Gaps = 42/441 (9%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
+CK G EA +F+ + K V + M+ GY K D FL M +
Sbjct: 89 FCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDY 148
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
L + CG ++G ++HGL+ GF+ ++ + +++++Y + +D A K+F M
Sbjct: 149 ACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQH 208
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMI--------------- 272
+D VSW +L++GY NG + A +L +M D V+ +++
Sbjct: 209 KDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSI 268
Query: 273 ------TGFSSKGNLEKSI--------------ELFNMMPEKDDVTWTAIISGFVNNEQY 312
+GF S N+ ++ +F M K V+W +I G N +
Sbjct: 269 HGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGES 328
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EEAF F++ML + P ++T+ VL A A L +G +H + K+ ++S+VS+ NSL
Sbjct: 329 EEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSL 388
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+S+YSKC V A IF N+++ N V++N+MI G+AQNG +EALNLF M+ +G+ +
Sbjct: 389 ISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDC 447
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
T + V++A + + + + ++ +VD+ + G++ A L +
Sbjct: 448 FTLVGVITALADFSVNRQA-KWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFD 506
Query: 493 SMTFEPPPGVWGALLGAGRTH 513
M E W A++ TH
Sbjct: 507 MMQ-ERHVITWNAMIDGYGTH 526
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 155/329 (47%), Gaps = 42/329 (12%)
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+L E C +E Q+ + + GF + + +I+++ + G EA +VF +
Sbjct: 51 VVLLENCTS---KKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVEL 107
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKD- 264
+ V ++ ++ GY N + +A F RM G++
Sbjct: 108 KLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREI 167
Query: 265 ------------FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
T +++ ++ ++ + ++F M KD V+WT +++G+ N
Sbjct: 168 HGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHA 227
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
+ A + ++M +P+ +TL S+L A A L G IH + + ES V++ N+L
Sbjct: 228 KRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNAL 287
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ +Y KCG+ A +F + + +VS+N+MI G AQNG EEA F KM DEG VP +
Sbjct: 288 LDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTR 347
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+T + VL AC ++G +E G+ K + L
Sbjct: 348 VTMMGVLLACANLGDLERGWFVHKLLDKL 376
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 108/201 (53%), Gaps = 5/201 (2%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T +I+ F G+ ++ +F + K DV + ++ G+ N +A +F+ M+ +VR
Sbjct: 83 TKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVR 142
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ +L L +G +IH ++ ES++ + +++SLY+KC + +AY++
Sbjct: 143 LVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKM 202
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN----- 443
F + +++VS+ ++++G+AQNG + AL L +M++ G P+ +T +S+L A
Sbjct: 203 FERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKAL 262
Query: 444 HVGLVEEGFIYFKSMKTLYNI 464
+G G+ + ++L N+
Sbjct: 263 RIGRSIHGYAFRSGFESLVNV 283
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYV 62
++T+ ++NAMI N C + EA +F M S + F G+ + V
Sbjct: 409 EKTNVTWNAMILGYAQNGC-VKEALNLFCMMQ-----SQGIKLDCFTLVGVITALADFSV 462
Query: 63 NMPARW-----------RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
N A+W + S AL+ Y K G + A ++F+ M E+ V+ W +M+DG
Sbjct: 463 NRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDG 522
Query: 112 YCKKGRVIEAREIFDKMP----EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
Y G E ++F++M + N + + +++ E+G LF SM+
Sbjct: 523 YGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQ 575
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/551 (31%), Positives = 309/551 (56%), Gaps = 14/551 (2%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY----CKKGRVIEAREIFD 126
S+C N+++S Y + R E A F++ + + +W S++ Y C G +E+
Sbjct: 268 SIC-NSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMES 326
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+ +++ W +++ G++ +E+ F S++ G +S ++T +A +
Sbjct: 327 SGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNL 386
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G ++HG + R +YD+ + S++ Y + +D+A VF ++ +WNSLISGY +
Sbjct: 387 GKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTY 446
Query: 247 NGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVT 298
G + A +L +M + D V+W ++++G+S G E+++ + N + + V+
Sbjct: 447 KGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVS 506
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA+ISG NE Y +A ++F +M ++V+PN T+ ++L A A ++ L G +IH +
Sbjct: 507 WTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSM 566
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ D+ I +L+ +Y K G + A+ +F NI E+ + +N M+ G+A G GEE
Sbjct: 567 RHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFT 626
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M+ G+ P+ ITF ++LS C + GLV +G+ YF SMKT YNI P EHY+CMVD+L
Sbjct: 627 LFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLL 686
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
G+AG L EA+D I+++ + +WGA+L A R H ++ +A++AA++L+ LEP ++ Y
Sbjct: 687 GKAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYA 746
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
++ ++YS + D R++ ++ SWI +K +H+F KS + EI
Sbjct: 747 LMMNIYSTFDRWGDVERLKESMTALGVKIPNVWSWIQVKQTIHVFSTEGKSHPEEGEIYF 806
Query: 599 TL-QTISKGTK 608
L Q IS+ K
Sbjct: 807 ELYQLISEIKK 817
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 186/401 (46%), Gaps = 36/401 (8%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV ++++ Y K + A ++FD+ P + W +V ++ + +ED +LF M+
Sbjct: 165 DVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQ 224
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
T+ L +ACG+ EG Q+HG V RFG + + NSI++MY R ++
Sbjct: 225 SASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLE 284
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFS 276
A F ++ SWNS+IS Y N + A+ L + M D ++W ++++G
Sbjct: 285 LARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHL 344
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
+G+ E + F + +GF +P+ +++S
Sbjct: 345 LQGSYENVLTNFRSLQS----------AGF---------------------KPDSCSITS 373
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
L A N G +IH ++++ +E DV + SLV Y K + A +F + +N
Sbjct: 374 ALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKN 433
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
I ++NS+ISG+ GL + A L +MK+EG+ P+ +T+ S++S + G EE
Sbjct: 434 ICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVIN 493
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
+K+L + P + M+ + + +A+ + M E
Sbjct: 494 RIKSL-GLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEE 533
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 11 AMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW-- 68
+++ I N+C + +A +F +N ++ ++I+G+ +G+F AE+L M
Sbjct: 408 SLVDKYIKNDC-LDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIK 466
Query: 69 RDSVCSNALISGYLKVGRCEEAA----RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
D V N+L+SGY GR EEA RI + +VV+W +M+ G C+ ++A +
Sbjct: 467 PDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQF 526
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F +M E+NV NS T+ L AC
Sbjct: 527 FSQMQEENVKP-------------------------------NSTTICTLLRACAGSSLL 555
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
+ G ++H R GF DI + ++I MYG+ G + A++VF + ++ WN ++ GY
Sbjct: 556 KIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGY 615
Query: 245 VHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM 291
G EE + LF+ M D +++T +++G + G + + F+ M
Sbjct: 616 AIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSM 666
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 224 KVFSMMSKRDAVSWN-SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE 282
++ M KR+ V+ + S++ Y+ G+ E A ++F ++++ W + I F+S G
Sbjct: 53 QIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGG-- 110
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
E F E+ K V+ + L+ VL
Sbjct: 111 ----------------------------DSHEILAVFKELHDKGVKFDSKALTVVLKICL 142
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
A L G ++HA +VK DV + +L++LY K + A ++F + +N+
Sbjct: 143 ALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNT 202
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++ ++ E+AL LFR+M+ T + +L AC + + EG
Sbjct: 203 IVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEG 251
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 346 TLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
TLN ++HA ++KM + + V++ S++ Y + G+ A ++F RN + +NS I
Sbjct: 43 TLNSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWNSFI 102
Query: 405 SGFAQ-NGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC-----------NHVGLVEEGF 452
FA G E L +F+++ D+G+ + VL C H LV+ GF
Sbjct: 103 EEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRGF 162
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 295/537 (54%), Gaps = 40/537 (7%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
S+V Y K RV AR++FD+M E++V++W ++++GY+ E G +F+ M G+
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T+ +F C G VH + + F + N+++ MY + G +D A VF
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------- 261
MS R VS+ S+I+GY G EA +LFE M
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 262 -GKDFVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
GK W ++ ++ G+++++ +F+ M KD ++W II G+
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 308 NNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N EA F +L K P++ T++ VL A A+ + ++G +IH ++++ SD
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ NSLV +Y+KCG ++ A+ +F +I +++VS+ MI+G+ +G G+EA+ LF +M+
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G+ ++I+F+S+L AC+H GLV+EG+ +F M+ IEP EHYAC+VD+L R G L +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A I +M P +WGALL R H ++ LA+ A+ + ELEP++ YV+++++Y+
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K R+R + + +RK+PGCSWI +K +V++F+AG S + + IE L+ +
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 771
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 206/415 (49%), Gaps = 45/415 (10%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y G + EA +FD++ + + W +++ K F LF M G+ +S T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ + ++ G Q+HG + + GF +GNS++ Y + +D A KVF M++
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDF 265
RD +SWNS+I+GYV NG E+ +F +M G+
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 266 VS-------------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
S T++ +S G+L+ + +F M ++ V++T++I+G+
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLA 378
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA + F EM + + P+ T+++VL+ A L++G ++H + + ++ D+ + N+L
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNAL 438
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG-LVPN 431
+ +Y+KCG++ +A +F+ + ++I+S+N++I G+++N EAL+LF + +E P+
Sbjct: 439 MDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPD 498
Query: 432 QITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYA-CMVDILGRAGSL 484
+ T VL AC + ++G I+ M+ Y H A +VD+ + G+L
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGAL 550
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 162/321 (50%), Gaps = 39/321 (12%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
TL + + C ++G +V + GF D LG+ + MY G + EA++VF +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERM--PGKDFVSWT------------------ 269
A+ WN L++ +G+ + LF++M G + S+T
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 270 -----TMITGFSSKGNLEKSI--------------ELFNMMPEKDDVTWTAIISGFVNNE 310
+ +GF + ++ S+ ++F+ M E+D ++W +II+G+V+N
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
E+ F++ML + + T+ SV + A + ++ G +H+ VK + N
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+ +YSKCG++ A +F + +R++VSY SMI+G+A+ GL EA+ LF +M++EG+ P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 431 NQITFLSVLSACNHVGLVEEG 451
+ T +VL+ C L++EG
Sbjct: 396 DVYTVTAVLNCCARYRLLDEG 416
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 142/277 (51%), Gaps = 17/277 (6%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLKVGR 86
+F M R+ VSY +MI G+ R G+ EA +L+ M D A+++ +
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 87 CEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+E R+ E + E D+ +++D Y K G + EA +F +M K++++W ++ G
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 143 YMKVDCFEDG----FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
Y K +C+ + F+L L +R + + T+ + AC + +G ++HG + R G
Sbjct: 473 YSK-NCYANEALSLFNLLLEEKR--FSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ D + NS++ MY + G + A+ +F ++ +D VSW +I+GY +G +EA LF
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 259 RMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMM 291
+M D +S+ +++ S G +++ FN+M
Sbjct: 590 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
F + E A + + D+ P TL SVL A + +L G ++ + D
Sbjct: 71 FCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVID 128
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
++ + L +Y+ CG++ +A R+F + + +N +++ A++G ++ LF+KM
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 426 EGLVPNQITFLSV 438
G+ + TF V
Sbjct: 189 SGVEMDSYTFSCV 201
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 101/271 (37%), Gaps = 59/271 (21%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVS-----YAAMITGFVRRGMFYEAEEL-- 60
S+N +I + NC EA +F + S A ++ F + E+
Sbjct: 465 SWNTIIGGY-SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y+ + D +N+L+ Y K G A +F+ + KD+V+W M+ GY G E
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG- 179
A +F++ MR+ G+ + I+ L AC
Sbjct: 584 AIALFNQ-------------------------------MRQAGIEADEISFVSLLYACSH 612
Query: 180 --------RFFR-YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
RFF R ++ V + I+ M R G + +A + M
Sbjct: 613 SGLVDEGWRFFNIMRHECKIEPTVEHYA---------CIVDMLARTGDLIKAYRFIENMP 663
Query: 231 -KRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
DA W +L+ G + +++ A ++ E++
Sbjct: 664 IPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 196/643 (30%), Positives = 336/643 (52%), Gaps = 57/643 (8%)
Query: 14 TALIN--NNCS-IYEAFEIFATMPMR-NAVSYAAMITGFVRRGMFYEAEELY-------- 61
TALI ++CS EA+ +F + R N V++ MI GFV GM+ ++ ELY
Sbjct: 181 TALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENC 240
Query: 62 --VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
V+ + CS+ + + + C+ + + + D S++ Y K G V
Sbjct: 241 KLVSASFTGAFTACSHGEVLDFGRQVHCD----VIKMNFQDDPYVCTSLLTMYAKSGSVE 296
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+A+++FD++ +K V AM+ ++ D L+ M+ G +S T++ L C
Sbjct: 297 DAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCS 356
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
Y G VH V + ++ + ++++TMY + G ++A+ VF M +RD V+W S
Sbjct: 357 VVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGS 416
Query: 240 LISGYVHNGEIEEAYRLFERMP-------------------GKDFVSWTTMITGFSSKGN 280
+I+G+ N ++A LF M G + V +I GF+ K
Sbjct: 417 MIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRG 476
Query: 281 LEKSI--------------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
LE + +F+ MP K+ V W ++IS + N E +
Sbjct: 477 LESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLP 536
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
++L+ + +++++VL A ++ A L +G +HA+ +++ + SD+ ++N+L+ +Y KCG
Sbjct: 537 QILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCG 596
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+ A IF N+ RN+V++NSMI+G+ +G EEA+ LF++MK P+++TFL++++
Sbjct: 597 CLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALIT 656
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
+C+H G+VEEG F+ M+ Y +EP EHYA +VD+LGRAG L +A I M +
Sbjct: 657 SCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADR 716
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
VW LL A R H N++L +L A +L+++EP + YV L +LY + +R
Sbjct: 717 SVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASM 776
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K + ++KSPGCSWI +K++V +F +G S EI TL ++
Sbjct: 777 KGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSL 819
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 146/580 (25%), Positives = 267/580 (46%), Gaps = 94/580 (16%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA-MVEKDVV 103
I V++G + +A EL+ P S + A + + C + ++ + +V
Sbjct: 27 IKALVQQGKYSQALELHSKTP----HSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIV 82
Query: 104 AWG---------SMVDGYCKKGRVIEAREIFDKMPEK-----NVVAWTAMVDGYMKVDCF 149
G S+++ Y K G + A ++FDKM E ++ W ++DGY K F
Sbjct: 83 TMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHF 142
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
E+G F M+ Y G Q+HG + R F+ D L ++
Sbjct: 143 EEGLAQFCRMQ-------------------ELSWYMAGRQIHGYIIRNMFEGDPYLETAL 183
Query: 210 ITMYGRLGFMDEANKVFSMMSKR-DAVSWNSLISGYVHNGEIEEAYRL------------ 256
I MY EA +F + R + V+WN +I G+V NG E++ L
Sbjct: 184 IGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLV 243
Query: 257 ------------------FERMPGKDFVS---------WTTMITGFSSKGNLEKSIELFN 289
F R D + T+++T ++ G++E + ++F+
Sbjct: 244 SASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFD 303
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+ +K+ A+IS F+ N + +A + +M + + T+SS+LS + + +
Sbjct: 304 QVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDF 363
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G +HA V+K +M+S+V+IQ++L+++Y KCG+ DA +F + ER++V++ SMI+GF Q
Sbjct: 364 GRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQ 423
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
N ++AL+LFR M+ EG+ + SV+SA + VE G + + I+ G E
Sbjct: 424 NRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHG-----FAIKRGLE 478
Query: 470 H---YAC-MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKL 521
AC +VD+ + G AE+ +++ S W +++ G ++++L
Sbjct: 479 SDVFVACSLVDMYSKFG-FAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQ 537
Query: 522 AAQHLMELEPDSATPYVV-LSDLYSVI-GKKRDGNRVRMK 559
QH L+ S T +V +S + +++ GK ++R++
Sbjct: 538 ILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ 577
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/563 (24%), Positives = 250/563 (44%), Gaps = 77/563 (13%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCS----NALISGYLKVGRCEE--------- 89
++I +V+ G+ A +++ M + RDS N +I GY K G EE
Sbjct: 95 SLINMYVKCGLLGSALQVFDKM-SESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQ 153
Query: 90 ------AAR-----IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAWT 137
A R I M E D +++ Y R +EA +F K+ + N+VAW
Sbjct: 154 ELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWN 213
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
M+ G+++ +E +L+ + S + T F AC G QVH V +
Sbjct: 214 VMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKM 273
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
F D + S++TMY + G +++A KVF + ++ N++IS ++ NG +A L+
Sbjct: 274 NFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLY 333
Query: 258 ERMPGK----DFVSWTTMITGFS-----------------------------------SK 278
+M D + +++++G S
Sbjct: 334 NKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKC 393
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G+ E + +F M E+D V W ++I+GF N ++++A F M ++ V+ + ++SV+
Sbjct: 394 GSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVI 453
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA + G IH +K +ESDV + SLV +YSK G A +F+++ +N+V
Sbjct: 454 SAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLV 513
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++NSMIS ++ NGL E ++NL ++ G + ++ +VL A + V + +G +
Sbjct: 514 AWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKT-LHAY 572
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG----VWGALLGAGRTHL 514
+ I + ++D+ + G L A + FE P W +++ +H
Sbjct: 573 QIRLQIPSDLQVENALIDMYVKCGCLKYA-----QLIFENMPRRNLVTWNSMIAGYGSHG 627
Query: 515 NLDLAKLAAQHLM--ELEPDSAT 535
N + A + + E PD T
Sbjct: 628 NCEEAVRLFKEMKRSETAPDEVT 650
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 281/522 (53%), Gaps = 44/522 (8%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++D Y K G++ A E+FD MPE+NVV+WTA++ G++ + LF MR G +
Sbjct: 240 NLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSP 299
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
N TL+ +ACG R GVQ+HG+ R GF+ ++ NS++ MY + + +A +VF
Sbjct: 300 NEFTLSATLKACGGG--TRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVF 357
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVSWTTMITGFSSKG-- 279
++ R+ +WNS+ISGY H G+ ++ +F M + D ++ +++ S G
Sbjct: 358 DVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAA 417
Query: 280 -----------------------------------NLEKSIELFNMMPEKDDVTWTAIIS 304
L ++++F+ + ++ + WT +I
Sbjct: 418 REGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIV 477
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G Q +EA F VR + LSSV++ A A + QG Q+H + K
Sbjct: 478 GHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL 537
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
DVS+ NSLV +Y KCG +A R F + RN+VS+ +MI+G ++G G EA++LF +M+
Sbjct: 538 DVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQ 597
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
EG+ +++ +L++LSAC+H GLV+E YF + + P EHYACMVD+LGRAG L
Sbjct: 598 AEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGEL 657
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA +LI SM EP GVW LL A R H ++ + + L+ ++ D+ YV+LS++
Sbjct: 658 REAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNIL 717
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ G+ R+ +R + K +RK GCSW + +VH F G
Sbjct: 718 AEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGG 759
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 163/336 (48%), Gaps = 46/336 (13%)
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
FL M R M + L A R R GVQ+H + + GF D +L N++I MY +
Sbjct: 194 FLPMERRRM------IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAK 247
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVSWTT 270
G + A +VF M +R+ VSW +L+ G++H+GE E RLF M G +F T
Sbjct: 248 CGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSAT 307
Query: 271 MI------------------TGFSSKGNLEKSI--------------ELFNMMPEKDDVT 298
+ TGF + S+ +F+++P ++ T
Sbjct: 308 LKACGGGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLAT 367
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHA-- 355
W ++ISG+ + Q ++ F EM R+ D +P++ T +S+L A + +G+Q+HA
Sbjct: 368 WNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAM 427
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
V ++ S+ + +L+ +Y KC + A ++F ++ RN + + ++I G AQ G +E
Sbjct: 428 AVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKE 487
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
A+ LFR+ G+ + SV++ LVE+G
Sbjct: 488 AMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQG 523
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 7/200 (3%)
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G D + +I ++ G L + E+F+ MPE++ V+WTA++ GF+++ + E R F E
Sbjct: 232 GSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGE 291
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M PN+ TLS+ L A G QIH V+ E + NSLV +YSK
Sbjct: 292 MRGSGTSPNEFTLSATLKACGGGT--RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRW 349
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK---DEGLVPNQITFLSV 438
DA R+F I RN+ ++NSMISG+A G G ++L +FR+M+ DE P++ TF S+
Sbjct: 350 TGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDE--QPDEFTFASL 407
Query: 439 LSACNHVGLVEEGFIYFKSM 458
L AC+ +G EG +M
Sbjct: 408 LKACSGLGAAREGAQVHAAM 427
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 190/449 (42%), Gaps = 62/449 (13%)
Query: 16 LINNN-------CS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
++NNN C ++ A E+F MP RN VS+ A++ GF+ G E L+ M R
Sbjct: 236 MLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEM--R 293
Query: 68 WRDSVCSNALISGYLKV--GRCEEAARIFEAMVE-----KDVVAWGSMVDGYCKKGRVIE 120
+ + +S LK G +I V DVVA S+V Y K +
Sbjct: 294 GSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGHDVVA-NSLVVMYSKGRWTGD 352
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACG 179
AR +FD +P +N+ W +M+ GY D +F M RR + T L +AC
Sbjct: 353 ARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACS 412
Query: 180 RFFRYREGVQVHGLVSRFGFD--YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
REG QVH ++ G + IL +++ +Y + + A +VF + +R+A+ W
Sbjct: 413 GLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQW 472
Query: 238 NSLISGYVHNGEIEEAYRLFERM------------------------------------- 260
++I G+ G+++EA LF R
Sbjct: 473 TTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAK 532
Query: 261 --PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
G D +++ + G ++ F MP ++ V+WTA+I+G + EA
Sbjct: 533 TPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDL 592
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYS 377
F EM + V +++ ++LSA + + +++ + + + + M +V L
Sbjct: 593 FEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLG 652
Query: 378 KCGNVVDAYRIFTNID-ERNIVSYNSMIS 405
+ G + +A + ++ E + + +++S
Sbjct: 653 RAGELREAKELILSMPMEPTVGVWQTLLS 681
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 182/442 (41%), Gaps = 77/442 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR-----NAVSYAAMITGFVRRGMFY 55
+ R A++N+MI+ + ++ +F M R + ++A+++ G
Sbjct: 360 IPSRNLATWNSMISGYAHAG-QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAR 418
Query: 56 EAEELYVNMPARWRDSVCSNALISG-----YLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
E +++ M R S SNA+++G Y+K R A ++F+ + ++ + W +++
Sbjct: 419 EGAQVHAAMAVRGV-SPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIV 477
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
G+ ++G+V EA +F + W++ V R G +S+
Sbjct: 478 GHAQEGQVKEAMCLFRRF-------WSSGV-------------------RADGHVLSSVV 511
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
F +G QVH ++ D+ + NS++ MY + G EA + F M
Sbjct: 512 AVF-----ADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMP 566
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
R+ VSW ++I+G +G EA LFE M +
Sbjct: 567 ARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGV------------------------- 601
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQ 349
E D+V + A++S ++ +E R+F + + + +RP + ++ L +
Sbjct: 602 --EADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELRE 659
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV---DAYRIFTNIDERNIVSYNSMISG 406
++ ++ M ME V + +L+S +V + + +D N V+Y + +
Sbjct: 660 AKEL---ILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNI 716
Query: 407 FAQNGLGEEALNLFRKMKDEGL 428
A+ G E + M+ +GL
Sbjct: 717 LAEAGEWRECQGIRGAMRRKGL 738
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 182/551 (33%), Positives = 288/551 (52%), Gaps = 49/551 (8%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP----E 130
N LI Y K+GR +A +F+ M + ++W +MV Y A EIF +M E
Sbjct: 81 NELIGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGME 140
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
N+V WT+++ Y + E+ +LF MR G+ + L ++ C + +
Sbjct: 141 PNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKII 200
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + GF+ + +++I +YG+ +G++
Sbjct: 201 HEYAVKGGFEEYSFVKSALICVYGK-------------------------------HGDV 229
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD--------VTWTAI 302
A+ LF M K SW +IT + G ++++E+F+ + D V+W+AI
Sbjct: 230 NGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAI 289
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
I GF + + +EA F M + N +T+S+VLS A A L+ G +IH HVV+ M
Sbjct: 290 IDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVM 349
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+++ + N LV++Y+KCG + + + IF + ++++S+NSMI+G+ +GLG AL F +
Sbjct: 350 VNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQ 409
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
M G P+ +TF++VLS+C+H GLV EG F M Y IEP EHYACMVD+LGRAG
Sbjct: 410 MIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAG 469
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT-PYVVLS 541
L EA +++ +M P VWGALL + R H N ++A+ A HL L T Y++LS
Sbjct: 470 LLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLS 529
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI----- 596
++Y+ G+ D RVR K K ++K+PG SWI ++ V+ F AG ++I
Sbjct: 530 NIYAASGRWEDSARVRTSAKTKGLKKNPGQSWIKVEKNVYTFSAGNNMQRGFEQIFEILE 589
Query: 597 EVTLQTISKGT 607
E+T Q +GT
Sbjct: 590 ELTFQMEREGT 600
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 149/309 (48%), Gaps = 39/309 (12%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
MR+ G + T ++ AC + G +HG V GF + +GN +I MY +LG
Sbjct: 33 MRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGR 92
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITG 274
M +A +F MS R +SWN+++S Y N + A +F+RM + + V+WT++I+
Sbjct: 93 MRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISS 152
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ G E+++ELF +M K V + L
Sbjct: 153 YARSGWHEEAMELFGLMR-------------------------------MKGVEVSGEAL 181
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+ V+S A + IH + VK E ++++L+ +Y K G+V A+ +F +
Sbjct: 182 AVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKN 241
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG----LVPNQITFLSVLSACNHVGLVEE 450
+++ S+N++I+ A+ GL +EAL +F +++ G L PN +++ +++ G +E
Sbjct: 242 KSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKE 301
Query: 451 GFIYFKSMK 459
F+ M+
Sbjct: 302 ALELFRRMQ 310
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 217/517 (41%), Gaps = 102/517 (19%)
Query: 1 MADRTSASYNAMITAL-INNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFY 55
M+ R+ S+N M++A N +C+ A EIF M N V++ ++I+ + R G
Sbjct: 103 MSVRSYISWNTMVSAYAFNYDCN--GALEIFQRMESEGMEPNLVTWTSLISSYARSGWHE 160
Query: 56 EAEELYVNMPARWRD----------SVCSN---------------------------ALI 78
EA EL+ M + + S+C++ ALI
Sbjct: 161 EAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALI 220
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK------- 131
Y K G A +F M K + +W +++ + + G EA EIF ++
Sbjct: 221 CVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLR 280
Query: 132 -NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
NVV+W+A++DG+ ++ +LF M+ + N++T++ + C G ++
Sbjct: 281 PNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREI 340
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG V R +I++GN ++ MY + G + E + +F ++D +SWNS+I+GY +G
Sbjct: 341 HGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLG 400
Query: 251 EEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
A F++M F V++ +++ S G + + LF+ M +K +
Sbjct: 401 MNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRI--------- 451
Query: 307 VNNEQYEEAFRWFIEMLRK--------------DVRPNQLTLSSVLSASAATATLNQGSQ 352
E E + +++L + V PN ++L++ +
Sbjct: 452 ---EPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEE 508
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID---------------ERNI 397
+H+ ++ L ++Y+ G D+ R+ T+ E+N+
Sbjct: 509 TASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQSWIKVEKNV 568
Query: 398 VSY---NSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
++ N+M GF Q + E L +M+ EG V +
Sbjct: 569 YTFSAGNNMQRGFEQ--IFEILEELTFQMEREGTVHD 603
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T V+ A A + G IH HV++M +S + + N L+ +Y+K G + DA +F
Sbjct: 43 FTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDR 102
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ R+ +S+N+M+S +A N AL +F++M+ EG+ PN +T+ S++S+ G EE
Sbjct: 103 MSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEA 162
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
F M+ + +E E A ++ I G+ A
Sbjct: 163 MELFGLMR-MKGVEVSGEALAVVISICADLGAFVRA 197
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 318/627 (50%), Gaps = 58/627 (9%)
Query: 34 PMRNAVSYAAMITGFVRRGMFYEAEELYVN-----MPARWRDSVCS--------NALISG 80
P NA M+ GF+R + A L+ +PA R V + + G
Sbjct: 97 PGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGG 156
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
G A + V + V+ ++V Y + +A ++FD+MPE++VV+WT +V
Sbjct: 157 TPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLV 216
Query: 141 DGYMKVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
DGY + ++ + LF M GGM N++TL A G+ G+ +H V+ G
Sbjct: 217 DGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGV 276
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ L N+++ M+G+ G + A +VF +
Sbjct: 277 ARSVNLDNALVDMFGKCGCVRYAREVF-------------------------------DG 305
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
M KD SWT+M+ ++ G+LE + +LF MP ++ V+W+ +I+ + Q EEA F
Sbjct: 306 MEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLF 365
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA-HVVKMNMESDVSIQNSLVSLYSK 378
EM+ V P TL SVLSA A L+ G I+ ++V + V++ N+L+ +++K
Sbjct: 366 REMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAK 425
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG+V +A ++F + ERN+VS+N+MI A +G EEA+ LF ++K E +VP+QITFL +
Sbjct: 426 CGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGL 485
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
L++C+H GLV EG YFK M+ Y IEP EHYACM+D+LG+ G L EA ++ M E
Sbjct: 486 LASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEA 545
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
WGALL A R H N+++ A L+EL+P + YV++S +Y+ K +RM
Sbjct: 546 DEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRM 605
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWS 618
+ + ++K+PGCS I ++ K H FL S +EI L+ I F + D S
Sbjct: 606 TMRDRGVKKNPGCSSIEVEGKFHDFLVADVSHACSEEIYSALKNIY-----FHLKQEDMS 660
Query: 619 LLGLERDWSYTADNIKRIKKFDWPKQY 645
W T N+ + +P Y
Sbjct: 661 -------WQGTIGNLIEPRFLSFPFSY 680
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 122/284 (42%), Gaps = 45/284 (15%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA++ C Y A E+F M +++ S+ +M+ + + G AE+L+ +MP R
Sbjct: 284 NALVDMFGKCGCVRY-AREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPR--R 340
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEK----------------------DVVAW-- 105
+ V + +I+ Y ++ + EEA +F M+ D+ W
Sbjct: 341 NVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIY 400
Query: 106 ----------------GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
+++D + K G V EA ++FD+M E+NVV+W M+ +
Sbjct: 401 ENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQS 460
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF-GFDYDIILGNS 208
E+ LF ++ + + IT L +C EG + + F + +
Sbjct: 461 EEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYAC 520
Query: 209 IITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIE 251
+I + G++G ++EA +V M + D W +L++ +G +E
Sbjct: 521 MIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVE 564
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 307/586 (52%), Gaps = 41/586 (6%)
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
G L GR A ++ ++ + +A ++ + Y K R +AR +FD+MP ++ VAW A+
Sbjct: 73 GDLATGRAVHA-QLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNAL 131
Query: 140 VDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
V GY + ++ + M+ G +SITL + AC + H R G
Sbjct: 132 VAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSG 191
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ + + +I+ Y + G + A VF M +++VSWN++I GY NG+ EA LF
Sbjct: 192 LEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFN 251
Query: 259 RM--PGKDFVSWT-------------------------------------TMITGFSSKG 279
RM G D + +IT +S
Sbjct: 252 RMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCK 311
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
++ + +F+ + + V+W A+I G N E+A R F M ++V+P+ TL SV+
Sbjct: 312 RVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIP 371
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A A + Q IH + ++++++ DV + +L+ +Y+KCG V A +F + ER++++
Sbjct: 372 ALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVIT 431
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+N+MI G+ +G G+ A+ LF +MK G+VPN+ TFLSVLSAC+H GLV+EG YF SMK
Sbjct: 432 WNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMK 491
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
Y +EPG EHY MVD+LGRAG L EA I M +P V+GA+LGA + H N++LA
Sbjct: 492 EDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELA 551
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
+ +AQ + EL P +V+L+++Y+ +D RVR + ++K+PG S I LK++
Sbjct: 552 EESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNE 611
Query: 580 VHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLERD 625
+H F +G + KEI L + + K + S+ +E D
Sbjct: 612 IHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDD 657
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 189/409 (46%), Gaps = 47/409 (11%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS----- 79
+A +F MP+R+ V++ A++ G+ R G+ A E+ V M + S L+S
Sbjct: 112 DARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPAC 171
Query: 80 --GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
E A + +E+ V +++D YCK G + AR +FD MP KN V+W
Sbjct: 172 ANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWN 231
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
AM+DGY + + LF M G+ +++ +ACG EG++VH L+ R
Sbjct: 232 AMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRI 291
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G D ++ + N++ITMY + +D A+ VF + +R VSWN++I G NG E+A RLF
Sbjct: 292 GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351
Query: 258 ERM----------------PG-----------------------KDFVSWTTMITGFSSK 278
RM P +D T +I ++
Sbjct: 352 TRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 411
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G + + LFN E+ +TW A+I G+ ++ + A F EM + PN+ T SVL
Sbjct: 412 GRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVL 471
Query: 339 SASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYSKCGNVVDAY 386
SA + +++G + + + +E + ++V L + G + +A+
Sbjct: 472 SACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAW 520
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 155/326 (47%), Gaps = 40/326 (12%)
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
F++M G T T L + C G VH ++ G D + + ++ MY +
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD--------FVS 267
+A +VF M RD V+WN+L++GY NG A + RM ++ VS
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 268 --------------------------------WTTMITGFSSKGNLEKSIELFNMMPEKD 295
T ++ + G++ + +F+ MP K+
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V+W A+I G+ N EA F M+ + V +++ + L A L++G ++H
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
+V++ ++S+VS+ N+L+++YSKC V A +F +D R VS+N+MI G AQNG E+
Sbjct: 287 LLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSED 346
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSA 441
A+ LF +M+ E + P+ T +SV+ A
Sbjct: 347 AVRLFTRMQLENVKPDSFTLVSVIPA 372
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 13/293 (4%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TA+++ C I A +F MP +N+VS+ AMI G+ + G EA L+ M D
Sbjct: 200 TAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVD 259
Query: 71 --SVCSNALISGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREI 124
V A + ++G +E R+ E +V + +V +++ Y K RV A +
Sbjct: 260 VTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHV 319
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD++ + V+W AM+ G + C ED LF M+ + +S TL + A
Sbjct: 320 FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDP 379
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
+ +HG R D D+ + ++I MY + G ++ A +F+ +R ++WN++I GY
Sbjct: 380 LQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGY 439
Query: 245 VHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGNLEKSIELFNMMPE 293
+G + A LFE M V ++ ++++ S G +++ E F M E
Sbjct: 440 GSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKE 492
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F+ M P T +S+L AA L G +HA + ++S+ +L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK-DEGLVPNQI 433
+Y+KC DA R+F + R+ V++N++++G+A+NGL A+ + +M+ +EG P+ I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 434 TFLSVL 439
T +SVL
Sbjct: 163 TLVSVL 168
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 138/341 (40%), Gaps = 47/341 (13%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
RT S+NAMI N CS +A +F M + N F + ++
Sbjct: 326 RTQVSWNAMILGCAQNGCS-EDAVRLFTRMQLENVKP-----DSFTLVSVIPALADISDP 379
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
+ ARW I GY + R+ +++DV +++D Y K GRV AR
Sbjct: 380 LQARW---------IHGY--------SIRLH---LDQDVYVLTALIDMYAKCGRVNIARI 419
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F+ E++V+ W AM+ GY + +LF M+ G+ N T + AC
Sbjct: 420 LFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGL 479
Query: 184 YREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
EG + + +G + + +++ + GR G +DEA M +S +
Sbjct: 480 VDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAML 539
Query: 243 GYV---HNGEI--EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
G N E+ E A ++FE P + + ++ + ++ K + EK+ +
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEGV--YHVLLANIYANASMWKDVARVRTAMEKNGL 597
Query: 298 T----WTAI---------ISGFVNNEQYEEAFRWFIEMLRK 325
W+ I SG N++Q +E + +++ +
Sbjct: 598 QKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEE 638
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 302/553 (54%), Gaps = 40/553 (7%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A+I + + + S+++ Y G + +A++IF P KNVV+WT ++ G K DCF
Sbjct: 45 AQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFV 104
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ D+F M G N++T++ + A R VH R GF+ ++ + +++
Sbjct: 105 EAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALV 164
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFV 266
MY + G M A ++F MS+R+ V+WN+++SGY +G EEA LF M K DF
Sbjct: 165 DMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFY 224
Query: 267 SWTTMI---------------------TGFSSKGNLEKSI--------------ELFNMM 291
+ ++I TG+ + +++ ++ +F+ M
Sbjct: 225 TIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEM 284
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQG 350
KD WT +++GF + ++ A + F +ML ++++ + + L +LS+ + + L QG
Sbjct: 285 SVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQG 344
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
++HA +K +++ + ++++ +Y+ CGN+ DA R F + E+++V +N+MI+G N
Sbjct: 345 RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMN 404
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
G G +A++LF +MK GL P++ TF+SVL AC+H G+V EG F M ++ P +H
Sbjct: 405 GYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQH 464
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE 530
YAC++DILGRAG L A IN+M F+P V+ LLGA R H N+ L +Q + E+E
Sbjct: 465 YACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEME 524
Query: 531 PDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSC 590
P+ A YV+LS++Y++ G R + KR++K PG S I + +++ F+AG K
Sbjct: 525 PNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDH 584
Query: 591 LDLKEIEVTLQTI 603
+IE L+ +
Sbjct: 585 PQYFKIEGILKGL 597
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 191/415 (46%), Gaps = 47/415 (11%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-ARWR-DSVCSNALISGYL 82
+A +IF P +N VS+ +I+G + F EA +++ M ++ ++V ++++ +
Sbjct: 74 DAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFA 133
Query: 83 KVG--RCEEAARIF--EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+G R ++ F E +V ++VD Y K G + AR++F+ M E+NVV W A
Sbjct: 134 NLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNA 193
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+V GY E+ DLF MRR G+ + T+ L A + G +HG + R G
Sbjct: 194 IVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG 253
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
++ D + +++ +Y +D+A++VFS MS +D +W +++G+ + A + F
Sbjct: 254 YENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFN 313
Query: 259 RMPG----------------------------------------KDFVSWTTMITGFSSK 278
+M G + + +I +++
Sbjct: 314 KMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANC 373
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
GNLE + F M EKD V W A+I+G N +A F++M + P++ T SVL
Sbjct: 374 GNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVL 433
Query: 339 SASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
A + + +G QI H+VK ++ ++ ++ + + G + AY N+
Sbjct: 434 YACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNM 488
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 186/397 (46%), Gaps = 50/397 (12%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + G ++ L NS++ Y G + +A ++F ++ VSW LISG N
Sbjct: 42 QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKND 101
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKG--NLEKSI----------------- 285
EA +F M +F V+ ++++ F++ G + KS+
Sbjct: 102 CFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161
Query: 286 ----------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+LF M E++ VTW AI+SG+ ++ EEA F M RK +
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ T+ S++ AS + L G+ IH +++ E+D I+ +L+ +Y V DA+R+F
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVF 281
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD-EGLVPNQITFLSVLSACNHVGLV 448
+ + +++ ++ M++GF+ + A+ F KM + L + I + +LS+C+H G +
Sbjct: 282 SEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGAL 341
Query: 449 EEG-FIYFKSMKTLY--NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
++G ++ ++KT + NI G + ++D+ G+L +A M E W A
Sbjct: 342 QQGRRVHALAIKTCFANNIFVG----SAVIDMYANCGNLEDAKRFFYGMG-EKDVVCWNA 396
Query: 506 LL-GAGRTHLNLDLAKLAAQHLME-LEPDSATPYVVL 540
++ G G D L Q L+PD +T VL
Sbjct: 397 MIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVL 433
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 192/612 (31%), Positives = 322/612 (52%), Gaps = 48/612 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNALISGYLK 83
A ++F MP ++ V++ MITG+V G A E +M R D +++ G
Sbjct: 55 ACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAH 114
Query: 84 VGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
R + ++ +V E+ V A +++D Y K RV +A ++F MP +N V+W A+
Sbjct: 115 ACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNAL 174
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+DG+++V + F L M++ G+ T L Y+ +Q+H + + G
Sbjct: 175 IDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGL 234
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFS-MMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
++ L N+ +T Y G +++A +VF + RD V+WNS++ Y+ + + E+A+ LF
Sbjct: 235 EFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFL 294
Query: 259 RMPG----KDFVSWTTMITGFSSKGN---------------------------------- 280
M G D ++T +I+ + +
Sbjct: 295 EMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLN 354
Query: 281 ---LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
+E ++ LF+ M KD V+W +I++GF E+A + F M + S+V
Sbjct: 355 NKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAV 414
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L + + A L G QIH VK +S+ + +SL+ +YSKCG + DA++ F + + +
Sbjct: 415 LRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESS 474
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
+++NS++ +AQ+G G+ AL+LF M++ + + +TF++VL+AC+HVGLVE+G KS
Sbjct: 475 ITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKS 534
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
M++ Y I P EHYAC VD+ GRAG L EA LI+SM F+P V LLGA R N++
Sbjct: 535 MESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIE 594
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
LA A L+E+EP+ YV+LS++Y + + D V + ++++K PG SWI +K
Sbjct: 595 LAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVK 654
Query: 578 DKVHLFLAGRKS 589
++VH F A +S
Sbjct: 655 NEVHAFKAEDRS 666
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 197/394 (50%), Gaps = 43/394 (10%)
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
C G + A ++FD+MP K+ V W M+ GY++ ++ SM+R G + T
Sbjct: 47 CFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFG 106
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ + R+ G QVH L+ + G++ + G++++ MY + +++A VF M R
Sbjct: 107 SILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVR 166
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMP-------------------GKDFVSWT---- 269
+ VSWN+LI G+V G+ + A+ L + M G F T
Sbjct: 167 NFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLH 226
Query: 270 ----------------TMITGFSSKGNLEKSIELFN-MMPEKDDVTWTAIISGFVNNEQY 312
+T +S G LE + +F+ + +D VTW +++ ++ +++
Sbjct: 227 CKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKD 286
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
E+AF F+EM P+ T + V+SA A A N G HA V+K +E V+I N+L
Sbjct: 287 EDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNAL 346
Query: 373 VSLYSKCGN--VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+++Y K N + A +F ++ ++ VS+NS+++GF+Q G E+AL LF M+
Sbjct: 347 ITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEI 406
Query: 431 NQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYN 463
+ + +VL +C+ + +++ G I+ ++KT ++
Sbjct: 407 DDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFD 440
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRL--GFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
H + G I + N+I+ Y + G ++ A K+F M +D V+WN++I+GYV +
Sbjct: 21 THCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVES 80
Query: 248 GEIEEAYRLFERMPGKDF---------------------------------------VSW 268
G + A+ + M + F +
Sbjct: 81 GNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAG 140
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-V 327
+ ++ ++ +E + ++F MP ++ V+W A+I GFV + AF W ++ ++K+ V
Sbjct: 141 SALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAF-WLLDCMQKEGV 199
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
R T + +L+ Q+H ++K +E ++ N+ ++ YS+CG + DA R
Sbjct: 200 RVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKR 259
Query: 388 IFTN-IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+F + R++V++NSM+ + + E+A NLF +M+ G P+ T+ V+SAC
Sbjct: 260 VFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISAC 315
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 21/282 (7%)
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G+L + +LF+ MP KD VTW +I+G+V + A+ + M R+ + + T S+L
Sbjct: 50 GDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSIL 109
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A + G Q+H+ +VK+ E V ++L+ +Y+KC V DAY +F + RN V
Sbjct: 110 KGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFV 169
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N++I GF Q G + A L M+ EG+ TF +L+ + +G ++K
Sbjct: 170 SWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLT-------LLDGDKFYKLT 222
Query: 459 KTLYN--IEPGPEHYACMVD----ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
L+ I+ G E Y + + G L +A + + W ++L A
Sbjct: 223 MQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLV 282
Query: 513 HLNLDLAKLAAQHLMEL-----EPDSATPYVVLSDLYSVIGK 549
H D + A +E+ EPD T V+S ++ K
Sbjct: 283 H---DKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHK 321
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 172/382 (45%), Gaps = 28/382 (7%)
Query: 9 YNAMITALIN--NNCSIYE-AFEIF-ATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
YNA+ A + + C + E A +F + R+ V++ +M+ ++ +A L++ M
Sbjct: 237 YNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEM 296
Query: 65 PARW--RDSVCSNALISGYLKVGRCEEAARIFEAMV-----EKDVVAWGSMVDGYCK-KG 116
D +IS + + F A+V E+ V +++ Y K
Sbjct: 297 QGFGFEPDIYTYTCVISACFAAAH-KNYGKSFHALVIKRGLEESVTICNALITMYLKLNN 355
Query: 117 RVIEAR-EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
+ +EA +F M K+ V+W +++ G+ ++ ED LF MR + + +
Sbjct: 356 KSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVL 415
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+C + G Q+H L + GFD + + +S+I MY + G +++A K F +K ++
Sbjct: 416 RSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSI 475
Query: 236 SWNSLISGYVHNGEIEEAYRLF----ERMPGKDFVSWTTMITGFSSKGNLE------KSI 285
+WNS++ Y +G+ + A LF ER D V++ ++T S G +E KS+
Sbjct: 476 TWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSM 535
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
E +P + + A+ Y E + I+ + +PN + L ++L A A
Sbjct: 536 ESDYGIPPRMEHYACAV--DLFGRAGYLEEAKALIDSM--PFQPNAMVLKTLLGACRACG 591
Query: 346 TLNQGSQIHAHVVKMNMESDVS 367
+ +Q+ + ++++ E +
Sbjct: 592 NIELAAQVASQLLEVEPEEHCT 613
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKC--GNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
H K + S + + N+++ YSKC G++ A ++F + ++ V++N+MI+G+ ++G
Sbjct: 22 HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLS----ACNH 444
A + MK G + TF S+L AC H
Sbjct: 82 NLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRH 118
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 267/455 (58%), Gaps = 1/455 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++F ++ + ++ W M+ G + L+ M G+ + T + + +AC +
Sbjct: 66 AHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTK 125
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ G +HG V + GF + + N++I + G + A +F +KR+ V W++L
Sbjct: 126 LSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSAL 185
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+GY G+++ A +LF+ MP KD VSW MIT ++ G +EK+ +LF+ +P+KD VTW
Sbjct: 186 TAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWN 245
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+I+G+V + +EA F M RP+ +T+ S+LSASA L G +IH + M
Sbjct: 246 AMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDM 305
Query: 361 NM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ V + N+L+ +Y+KCG++ +A +F + +++ S+NS+I G A +G EE++NL
Sbjct: 306 CCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINL 365
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F++M + PN+ITF++VL AC+H G V EG +YF MK ++ IEP +HY CMVDILG
Sbjct: 366 FQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILG 425
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L EA D I++M EP +W LLGA R H +++L + A + L+++ D + YV+
Sbjct: 426 RAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVL 485
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
LS++Y+ G+ +VR ++K G S I
Sbjct: 486 LSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLI 520
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 154/304 (50%), Gaps = 17/304 (5%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
R+ V +AL +GY + G+ + A ++F+ M KD+V+W M+ Y K G + +AR++FD++
Sbjct: 177 REVVPWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEV 236
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P+K+VV W AM+ GY+ ++ ++F +MR G + +T+ + A G
Sbjct: 237 PKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGK 296
Query: 189 QVH-GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++H + D ++L N++I MY + G + A +VF M K+D SWNS+I G +
Sbjct: 297 KIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALH 356
Query: 248 GEIEEAYRLFERM------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDD 296
G EE+ LF+ M P + +++ ++ S G + + FN+M E +
Sbjct: 357 GHAEESINLFQEMLRLKMKPNE--ITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNI 414
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+ ++ EAF FI+ + ++ PN + ++L A + G + +
Sbjct: 415 KHYGCMVDILGRAGLLIEAFD-FIDTM--EIEPNAIIWRTLLGACRVHGDVELGRRANEQ 471
Query: 357 VVKM 360
++KM
Sbjct: 472 LLKM 475
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 192/477 (40%), Gaps = 128/477 (26%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALIS 79
A ++FA + + + MI G + A LY M P ++ S A
Sbjct: 66 AHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTK 125
Query: 80 -GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
++K+G ++ ++ + + +++ + G + AR +FD ++ VV W+A
Sbjct: 126 LSWVKLGFGIHG-KVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSA 184
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+ GY RRG + V+R
Sbjct: 185 LTAGY---------------ARRGKLD----------------------------VARQL 201
Query: 199 FD----YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
FD D++ N +IT Y + G M++A K+F + K+D V+WN++I+GYV + +EA
Sbjct: 202 FDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEAL 261
Query: 255 RLFERM----PGKDFVSWTTMITGFSSKGNLE---------------------------- 282
+F+ M D V+ ++++ + G+LE
Sbjct: 262 EMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDM 321
Query: 283 --------KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++E+F M +KD +W +II G + EE+ F EMLR ++PN++T
Sbjct: 322 YAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITF 381
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+VL A + + +G +++ +++K + ++I E
Sbjct: 382 VAVLVACSHAGKVREG-RMYFNLMK------------------------NVFKI-----E 411
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
NI Y M+ + GL EA + M+ E PN I + ++L AC G VE G
Sbjct: 412 PNIKHYGCMVDILGRAGLLIEAFDFIDTMEIE---PNAIIWRTLLGACRVHGDVELG 465
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MPM++ VS+ MIT + + G +A +L+ +P +D V NA+I+GY+
Sbjct: 198 ARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPK--KDVVTWNAMIAGYVLSR 255
Query: 86 RCEEAARIFEAMV----------------------------------------EKDVVAW 105
+EA +F+AM + V+
Sbjct: 256 LNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLS 315
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+++D Y K G + A E+F M +K+ +W +++ G E+ +LF M R M
Sbjct: 316 NALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMK 375
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEA-N 223
N IT + AC + REG L+ F + +I ++ + GR G + EA +
Sbjct: 376 PNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFD 435
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ +M + +A+ W +L+ +G++E R E++
Sbjct: 436 FIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQL 472
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 149/378 (39%), Gaps = 97/378 (25%)
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+S V +G ++ A++LF ++ D W TMI G + ++ L+ M
Sbjct: 53 FVSAIVVSGTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMEN------ 106
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+ VRP++ T S VL A + + G IH V+K
Sbjct: 107 -------------------------RGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLK 141
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVD-------------------------------AYRI 388
+S+ ++N+L+ ++ CG++ A ++
Sbjct: 142 SGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDVARQL 201
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK-------------------------- 422
F + +++VS+N MI+ +A++G E+A LF +
Sbjct: 202 FDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEAL 261
Query: 423 -----MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
M+D G P+ +T LS+LSA +G +E G +S+ + + ++D+
Sbjct: 262 EMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDM 321
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL--EPDSAT 535
+ GS+ A+++ M + W +++G H + + + Q ++ L +P+ T
Sbjct: 322 YAKCGSIGNALEVFQGMR-KKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEIT 380
Query: 536 PYVVLSDLYSVIGKKRDG 553
VL S GK R+G
Sbjct: 381 FVAVLVAC-SHAGKVREG 397
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL--VSLYSKC 379
M+RK N S Q+HA ++ + S S+ L VS
Sbjct: 1 MIRKRTNDNSFNRFQQSSLWQKCTNFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVS 60
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G + A+++F I + +I +N+MI G AQ A++L+ +M++ G+ P++ TF VL
Sbjct: 61 GTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVL 120
Query: 440 SACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN-SMTFE 497
AC + V+ GF I+ K +K+ + + ++ G LA A L + S E
Sbjct: 121 KACTKLSWVKLGFGIHGKVLKSGFQSNTFVRN--TLIYFHANCGDLATARALFDASAKRE 178
Query: 498 PPPGVWGALLGAGRTHLNLDLAK 520
P W AL LD+A+
Sbjct: 179 VVP--WSALTAGYARRGKLDVAR 199
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 196/643 (30%), Positives = 336/643 (52%), Gaps = 57/643 (8%)
Query: 14 TALIN--NNCS-IYEAFEIFATMPMR-NAVSYAAMITGFVRRGMFYEAEELY-------- 61
TALI ++CS EA+ +F + R N V++ MI GFV GM+ ++ ELY
Sbjct: 586 TALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENC 645
Query: 62 --VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
V+ + CS+ + + + C+ + + + D S++ Y K G V
Sbjct: 646 KLVSASFTGAFTACSHGEVLDFGRQVHCD----VIKMNFQDDPYVCTSLLTMYAKSGSVE 701
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+A+++FD++ +K V AM+ ++ D L+ M+ G +S T++ L C
Sbjct: 702 DAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCS 761
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
Y G VH V + ++ + ++++TMY + G ++A+ VF M +RD V+W S
Sbjct: 762 VVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGS 821
Query: 240 LISGYVHNGEIEEAYRLFERMP-------------------GKDFVSWTTMITGFSSKGN 280
+I+G+ N ++A LF M G + V +I GF+ K
Sbjct: 822 MIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRG 881
Query: 281 LEKSI--------------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
LE + +F+ MP K+ V W ++IS + N E +
Sbjct: 882 LESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLP 941
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
++L+ + +++++VL A ++ A L +G +HA+ +++ + SD+ ++N+L+ +Y KCG
Sbjct: 942 QILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCG 1001
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+ A IF N+ RN+V++NSMI+G+ +G EEA+ LF++MK P+++TFL++++
Sbjct: 1002 CLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALIT 1061
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
+C+H G+VEEG F+ M+ Y +EP EHYA +VD+LGRAG L +A I M +
Sbjct: 1062 SCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADR 1121
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
VW LL A R H N++L +L A +L+++EP + YV L +LY + +R
Sbjct: 1122 SVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASM 1181
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K + ++KSPGCSWI +K++V +F +G S EI TL ++
Sbjct: 1182 KGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSL 1224
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 151/580 (26%), Positives = 277/580 (47%), Gaps = 75/580 (12%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA-MVEKDVV 103
I V++G + +A EL+ P S + A + + C + ++ + +V
Sbjct: 413 IKALVQQGKYSQALELHSKTP----HSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIV 468
Query: 104 AWG---------SMVDGYCKKGRVIEAREIFDKMPEK-----NVVAWTAMVDGYMKVDCF 149
G S+++ Y K G + A ++FDKM E ++ W ++DGY K F
Sbjct: 469 TMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHF 528
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
E+G F M+ G+ + +L+I+ C R Y G Q+HG + R F+ D L ++
Sbjct: 529 EEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETAL 588
Query: 210 ITMYGRLGFMDEANKVFSMMSKR-DAVSWNSLISGYVHNGEIEEAYRL------------ 256
I MY EA +F + R + V+WN +I G+V NG E++ L
Sbjct: 589 IGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLV 648
Query: 257 ------------------FERMPGKDFVSW---------TTMITGFSSKGNLEKSIELFN 289
F R D + T+++T ++ G++E + ++F+
Sbjct: 649 SASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFD 708
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+ +K+ A+IS F+ N + +A + +M + + T+SS+LS + + +
Sbjct: 709 QVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDF 768
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G +HA V+K +M+S+V+IQ++L+++Y KCG+ DA +F + ER++V++ SMI+GF Q
Sbjct: 769 GRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQ 828
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
N ++AL+LFR M+ EG+ + SV+SA + VE G + + I+ G E
Sbjct: 829 NRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHG-----FAIKRGLE 883
Query: 470 H---YAC-MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKL 521
AC +VD+ + G AE+ +++ S W +++ G ++++L
Sbjct: 884 SDVFVACSLVDMYSKFG-FAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQ 942
Query: 522 AAQHLMELEPDSATPYVV-LSDLYSVI-GKKRDGNRVRMK 559
QH L+ S T +V +S + +++ GK ++R++
Sbjct: 943 ILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ 982
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 302/563 (53%), Gaps = 40/563 (7%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
DS+ +++L YLK R +A ++F+ M ++DVV W +M+ GY + G V EA+E+F +M
Sbjct: 138 DSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMR 197
Query: 130 ----EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
E N+V+W M+ G+ +++ +F M G + T++ + A G
Sbjct: 198 SGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVV 257
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G QVHG V + G D + ++++ MYG+ G + E ++VF
Sbjct: 258 VGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFD------------------ 299
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTA 301
E+EE + S +TG S G ++ ++E+FN ++ + VTWT+
Sbjct: 300 ---EVEEM----------EIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTS 346
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
II+ N + EA F +M V PN +T+ S++ A + L G +IH ++
Sbjct: 347 IIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRG 406
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ DV + ++L+ +Y+KCG + A R F + N+VS+N+++ G+A +G +E + +F
Sbjct: 407 IFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFH 466
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
M G P+ +TF VLSAC GL EEG+ + SM + IEP EHYAC+V +L R
Sbjct: 467 MMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRV 526
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L EA +I M FEP VWGALL + R H NL L ++AA+ L LEP + Y++LS
Sbjct: 527 GKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLS 586
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
++Y+ G + NR+R K K +RK+PG SWI + KVH+ LAG +S +K+I L
Sbjct: 587 NIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLD 646
Query: 602 TISKGTKEFDW-PKHDWSLLGLE 623
++ K+ + PK ++ L +E
Sbjct: 647 KLNMQMKKSGYLPKTNFVLQDVE 669
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 173/361 (47%), Gaps = 36/361 (9%)
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
+P + ++++++ + + F F + + ++ L ++C G
Sbjct: 64 LPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG 123
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
Q+H + GF D I+ +S+ MY + + +A K+F M RD V W+++I+GY
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRL 183
Query: 248 GEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
G +EEA LF M + VSW M+ GF + G ++++ +F MM ++
Sbjct: 184 GLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMM----------LV 233
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
GF W P+ T+S VL A + G+Q+H +V+K +
Sbjct: 234 QGF-----------W----------PDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLG 272
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
SD + ++++ +Y KCG V + R+F ++E I S N+ ++G ++NG+ + AL +F K
Sbjct: 273 SDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKF 332
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
KD+ + N +T+ S++++C+ G E F+ M+ Y +EP ++ G +
Sbjct: 333 KDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQA-YGVEPNAVTIPSLIPACGNISA 391
Query: 484 L 484
L
Sbjct: 392 L 392
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 173/418 (41%), Gaps = 98/418 (23%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS--VCSNALISG 80
I +A ++F MP R+ V ++AMI G+ R G+ EA+EL+ M + + V N +++G
Sbjct: 155 ILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAG 214
Query: 81 YLKVGRCEEAARIFEAMVEK--------------------DVVAWG-------------- 106
+ G +EA +F M+ + DVV
Sbjct: 215 FGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSD 274
Query: 107 -----SMVDGYCKKGRVIEAREIFDKMPEK------------------------------ 131
+M+D Y K G V E +FD++ E
Sbjct: 275 KFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKD 334
Query: 132 -----NVVAWTAMVDGYMKVDCFEDGFD-----LFLSMRRGGMAFNSITLTILFEACGRF 181
NVV WT+++ C ++G D LF M+ G+ N++T+ L ACG
Sbjct: 335 QKMELNVVTWTSII-----ASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNI 389
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
G ++H R G D+ +G+++I MY + G + A + F MS + VSWN+++
Sbjct: 390 SALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVM 449
Query: 242 SGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
GY +G+ +E +F M D V++T +++ + G E+ +N M E+ +
Sbjct: 450 KGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGI 509
Query: 298 T-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+ +++ + EEA+ EM P+ ++LS+ L+ G
Sbjct: 510 EPKMEHYACLVTLLSRVGKLEEAYSIIKEM---PFEPDACVWGALLSSCRVHNNLSLG 564
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 101/196 (51%), Gaps = 1/196 (0%)
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
S+ L + +P +++++I F + + F + + P+ L S + + A+
Sbjct: 57 SLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCAS 116
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
L+ G Q+HA +D + +SL +Y KC ++DA ++F + +R++V +++M
Sbjct: 117 LRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAM 176
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I+G+++ GL EEA LF +M+ G+ PN +++ +L+ + G +E F+ M +
Sbjct: 177 IAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFR-MMLVQG 235
Query: 464 IEPGPEHYACMVDILG 479
P +C++ +G
Sbjct: 236 FWPDGSTVSCVLPAVG 251
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD---AYRIF 389
LS LS+S TA+L+Q Q HA ++++N+ SD + SL+S Y+ ++ + +
Sbjct: 4 ALSQCLSSS--TASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLS 61
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+++ + S++S+I FA++ L F + L+P+ S + +C + ++
Sbjct: 62 SHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALD 121
Query: 450 EG 451
G
Sbjct: 122 PG 123
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 307/586 (52%), Gaps = 41/586 (6%)
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
G L GR A ++ ++ + +A ++ + Y K R +AR +FD+MP ++ VAW A+
Sbjct: 73 GDLATGRAVHA-QLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNAL 131
Query: 140 VDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
V GY + ++ + M+ G +SITL + AC + H R G
Sbjct: 132 VAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSG 191
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ + + +I+ Y + G + A VF M +++VSWN++I GY NG+ EA LF
Sbjct: 192 LEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFN 251
Query: 259 RM--PGKDFVSWT-------------------------------------TMITGFSSKG 279
RM G D + +IT +S
Sbjct: 252 RMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCK 311
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
++ + +F+ + + V+W A+I G N E+A R F M ++V+P+ TL SV+
Sbjct: 312 RVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIP 371
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A A + Q IH + ++++++ DV + +L+ +Y+KCG V A +F + ER++++
Sbjct: 372 ALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVIT 431
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+N+MI G+ +G G+ A+ LF +MK G+VPN+ TFLSVLSAC+H GLV+EG YF SMK
Sbjct: 432 WNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMK 491
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
Y +EPG EHY MVD+LGRAG L EA I M +P V+GA+LGA + H N++LA
Sbjct: 492 EDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELA 551
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
+ +AQ + EL P +V+L+++Y+ +D RVR + ++K+PG S I LK++
Sbjct: 552 EESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNE 611
Query: 580 VHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLERD 625
+H F +G + KEI L + + K + S+ +E D
Sbjct: 612 IHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDD 657
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 189/409 (46%), Gaps = 47/409 (11%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS----- 79
+A +F MP+R+ V++ A++ G+ R G+ A E+ V M + S L+S
Sbjct: 112 DARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPAC 171
Query: 80 --GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
E A + +E+ V +++D YCK G + AR +FD MP KN V+W
Sbjct: 172 ANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWN 231
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
AM+DGY + + LF M G+ +++ +ACG EG++VH L+ R
Sbjct: 232 AMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRI 291
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G D ++ + N++ITMY + +D A+ VF + +R VSWN++I G NG E+A RLF
Sbjct: 292 GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351
Query: 258 ERM----------------PG-----------------------KDFVSWTTMITGFSSK 278
RM P +D T +I ++
Sbjct: 352 TRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 411
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G + + LFN E+ +TW A+I G+ ++ + A F EM + PN+ T SVL
Sbjct: 412 GRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVL 471
Query: 339 SASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYSKCGNVVDAY 386
SA + +++G + + + +E + ++V L + G + +A+
Sbjct: 472 SACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAW 520
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 155/326 (47%), Gaps = 40/326 (12%)
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
F++M G T T L + C G VH ++ G D + + ++ MY +
Sbjct: 47 FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD--------FVS 267
+A +VF M RD V+WN+L++GY NG A + RM ++ VS
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 268 --------------------------------WTTMITGFSSKGNLEKSIELFNMMPEKD 295
T ++ + G++ + +F+ MP K+
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V+W A+I G+ N EA F M+ + V +++ + L A L++G ++H
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
+V++ ++S+VS+ N+L+++YSKC V A +F +D R VS+N+MI G AQNG E+
Sbjct: 287 LLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSED 346
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSA 441
A+ LF +M+ E + P+ T +SV+ A
Sbjct: 347 AVRLFTRMQLENVKPDSFTLVSVIPA 372
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 140/293 (47%), Gaps = 13/293 (4%)
Query: 14 TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TA+++ C I A +F MP +N+VS+ AMI G+ + G EA L+ M D
Sbjct: 200 TAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVD 259
Query: 71 --SVCSNALISGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREI 124
V A + ++G +E R+ E +V + +V +++ Y K RV A +
Sbjct: 260 VTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHV 319
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD++ + V+W AM+ G + C ED LF M+ + +S TL + A
Sbjct: 320 FDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDP 379
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
+ +HG R D D+ + ++I MY + G ++ A +F+ +R ++WN++I GY
Sbjct: 380 LQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGY 439
Query: 245 VHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGNLEKSIELFNMMPE 293
+G + A LFE M V ++ ++++ S G +++ E F M E
Sbjct: 440 GSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKE 492
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F+ M P T +S+L AA L G +HA + ++S+ +L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK-DEGLVPNQI 433
+Y+KC DA R+F + R+ V++N++++G+A+NGL A+ + +M+ +EG P+ I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 434 TFLSVL 439
T +SVL
Sbjct: 163 TLVSVL 168
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 138/341 (40%), Gaps = 47/341 (13%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
RT S+NAMI N CS +A +F M + N F + ++
Sbjct: 326 RTQVSWNAMILGCAQNGCS-EDAVRLFTRMQLENVKP-----DSFTLVSVIPALADISDP 379
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
+ ARW I GY + R+ +++DV +++D Y K GRV AR
Sbjct: 380 LQARW---------IHGY--------SIRLH---LDQDVYVLTALIDMYAKCGRVNIARI 419
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F+ E++V+ W AM+ GY + +LF M+ G+ N T + AC
Sbjct: 420 LFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGL 479
Query: 184 YREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
EG + + +G + + +++ + GR G +DEA M +S +
Sbjct: 480 VDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAML 539
Query: 243 GYV---HNGEI--EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
G N E+ E A ++FE P + + ++ + ++ K + EK+ +
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEGV--YHVLLANIYANASMWKDVARVRTAMEKNGL 597
Query: 298 T----WTAI---------ISGFVNNEQYEEAFRWFIEMLRK 325
W+ I SG N++Q +E + +++ +
Sbjct: 598 QKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEE 638
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 187/566 (33%), Positives = 298/566 (52%), Gaps = 50/566 (8%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
S+++ Y K G V A + F PE ++++W M+ Y + + + F + R G+
Sbjct: 934 SLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKP 993
Query: 167 NSITLTILFEAC-----GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+ TL + AC G +F G QVH + G D + ++I +Y + G MDE
Sbjct: 994 DQFTLASVLRACSTGDEGEYFTL--GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDE 1051
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------- 260
A + D SWN+++ GY+ + + +A F M
Sbjct: 1052 AEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGC 1111
Query: 261 -----PGKDFVSWTTMITGFSSK--------------GNLEKSIELFNMMPEKDDVTWTA 301
GK ++ + GF++ G++ ++ELF + D+V WT
Sbjct: 1112 LINLKQGKQIQAYAIKL-GFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTT 1170
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+ISG++ N + A + M V+P++ T ++++ AS+ L QG QIHA+VVK++
Sbjct: 1171 MISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLD 1230
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
D + SLV +Y KCG+V DAYR+F +D R +V +N+M+ G AQ+G +EALNLFR
Sbjct: 1231 YSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFR 1290
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
M+ G+ P+++TF+ VLSAC+H GL E + YF +M Y I P EHY+C+VD LGRA
Sbjct: 1291 TMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRA 1350
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G + EA ++I SM F+ ++ ALLGA RT + + AK A L+ L+P ++ YV+LS
Sbjct: 1351 GRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLS 1410
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
++Y+ + D R KLK ++K PG SWI +K+KVHLF+ +S I ++
Sbjct: 1411 NIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIE 1470
Query: 602 TISKGTKEFDW--PKHDWSLLGLERD 625
+ K +E P D++LL +E +
Sbjct: 1471 DLMKRIREEGSYVPDTDFTLLDVEEE 1496
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 216/430 (50%), Gaps = 28/430 (6%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
LK+G+ ARI + D +++ Y K G + AR++FDK ++++V W +++
Sbjct: 627 LKLGK-RAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685
Query: 142 GYMKV--DCFE---DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
Y + +E +GF LF +R G + +TL L + C + VHG +
Sbjct: 686 AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
GF+ D+ + +++ +Y + G + +A +F M +RDAV WN ++ YV N +EA R
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805
Query: 257 FERMP----GKDFVSWTTMITGFSS------KGNLEK----SIELFNMMPEKDDVTWTAI 302
F DF + +I G +S K + E+ ++++F + W
Sbjct: 806 FSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKK 865
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
++ F++ Q A F +LR + + +TL +LSA+ L+ G QIHA V+K +
Sbjct: 866 LTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSF 925
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
V + NSL+++YSK G V A + F N E +++S+N+MIS +AQN L EA+ FR
Sbjct: 926 APVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRD 985
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEH----YACMVDI 477
+ +GL P+Q T SVL AC+ +EG + S +Y I+ G + ++D+
Sbjct: 986 LLRDGLKPDQFTLASVLRACS---TGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDL 1042
Query: 478 LGRAGSLAEA 487
+ G + EA
Sbjct: 1043 YSKGGKMDEA 1052
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/562 (24%), Positives = 249/562 (44%), Gaps = 70/562 (12%)
Query: 42 AAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK- 100
A++ + + G+ +A L+ MP R D+V N ++ Y++ +EA R F A
Sbjct: 756 GALVNIYCKYGLVGQARLLFDKMPER--DAVLWNVMLKAYVENSFQDEALRFFSAFHRSG 813
Query: 101 --------DVVAWGSMVDGYCKKGRVIE-----AREIFDKMPEKNVVAWTAMVDGYMKVD 147
V G D + R E A ++F N+ AW + ++
Sbjct: 814 FXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAG 873
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
D F ++ R + +S+TL I+ A G Q+H LV + F + + N
Sbjct: 874 QIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSN 933
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------P 261
S++ MY + G + A K F + D +SWN++IS Y N EA F + P
Sbjct: 934 SLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKP 993
Query: 262 GK-------------------------------------DFVSWTTMITGFSSKGNLEKS 284
+ FVS T +I +S G ++++
Sbjct: 994 DQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVS-TALIDLYSKGGKMDEA 1052
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
L + + D +W AI+ G++ + + +A F M + +++TL++ + AS
Sbjct: 1053 EFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCL 1112
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L QG QI A+ +K+ +D+ + + ++ +Y KCG++ +A +F I + V++ +MI
Sbjct: 1113 INLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMI 1172
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYN 463
SG+ +NG + AL+++ M+ G+ P++ TF +++ A + + +E+G I+ +K Y+
Sbjct: 1173 SGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYS 1232
Query: 464 IEPGPEHY--ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA-LLG-AGRTHLNLDLA 519
+ +H+ +VD+ + GS+ +A + M W A LLG A H++ L
Sbjct: 1233 L----DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVV-FWNAMLLGLAQHGHVDEALN 1287
Query: 520 KLAAQHLMELEPDSATPYVVLS 541
++PD T VLS
Sbjct: 1288 LFRTMQSNGIQPDKVTFIGVLS 1309
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 190/455 (41%), Gaps = 58/455 (12%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSV---------- 72
+Y A + F P + +S+ MI+ + + + EA + ++ RD +
Sbjct: 945 VYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDL---LRDGLKPDQFTLASV 1001
Query: 73 ---CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
CS Y +G I ++ V+ +++D Y K G++ EA +
Sbjct: 1002 LRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST-ALIDLYSKGGKMDEAEFLLHGKY 1060
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ ++ +W A++ GY+K + + F M G+ + ITL +A G ++G Q
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ 1120
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+ + GF+ D+ + + ++ MY + G M A ++F +S+ D V+W ++ISGY+ NG+
Sbjct: 1121 IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGD 1180
Query: 250 IEEAYRLFERM--------------------------PGK-------------DFVSWTT 270
+ A ++ M GK D T+
Sbjct: 1181 EDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTS 1240
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
++ + G+++ + +F M + V W A++ G + +EA F M ++P+
Sbjct: 1241 LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPD 1300
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
++T VLSA + + ++ + + K + ++ + LV + G + +A +
Sbjct: 1301 KVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVI 1360
Query: 390 TNIDERNIVS-YNSMISGFAQNGLGEEALNLFRKM 423
++ + S Y +++ G E A + K+
Sbjct: 1361 ASMPFKASASMYRALLGACRTKGDAETAKRVADKL 1395
>gi|302795382|ref|XP_002979454.1| hypothetical protein SELMODRAFT_111075 [Selaginella moellendorffii]
gi|300152702|gb|EFJ19343.1| hypothetical protein SELMODRAFT_111075 [Selaginella moellendorffii]
Length = 689
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 300/582 (51%), Gaps = 16/582 (2%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R +N M+ ++ + A I MP N VS+ M+T + RG A +
Sbjct: 94 MPQRNDYCWNTMLNGFASHG-DVTTACLILQLMPQHNVVSWTIMLTAYAERGHLALALSV 152
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ ++PAR RD V N L +EA + E M +VA SM+ + + G
Sbjct: 153 FDSVPARTRDVVTWNVLAQALAGNFHVDEAMLVLEKMPHHSLVAVNSMITAHAQAGHAHV 212
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +F MP +NVV+W+A + Y + + +L +M G+ N +TL + C
Sbjct: 213 ARHLFKNMPARNVVSWSATIGAYAQAGYIPESLELVRAMLLEGVKPNEVTLVAILTGCTP 272
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G VH ++R G D + N +I MYG+ G + EA K+F ++ ++ SWN +
Sbjct: 273 E-HLAIGRAVHQQIARSGDARDRFVQNLLIQMYGKCGAVQEARKIFDAIADKNVFSWNIM 331
Query: 241 ISGYVHNGEIEEAYRLFERM-PG--------KDFVSWTTMITGFSSKGNLEKSIELFNMM 291
I YV+NG + A L++RM P + V T +I FS+ G+L + E F+ +
Sbjct: 332 IGAYVNNGLDDHALDLYKRMAPALPSALGLETNPVVATALINAFSAAGSLLSAEEAFHCV 391
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ---LTLSSVLSASAATATLN 348
KD V WT++I+ F N A + F M + + P++ LT ++L+A + +
Sbjct: 392 DCKDAVCWTSMITAFARNGDGIGALKTFSRMNLEGIFPDEICILTYVTLLAACGSVGDVE 451
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+G + HA + E+ + NSL+S+YSK G +A +F I + ++NSMIS
Sbjct: 452 EGRRAHAKITASGFEAVPVVANSLLSMYSKFGRCDEAKVVFEKIQRKETGAFNSMISALT 511
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
++G EEAL LF M +G+ PN +TF++V AC H GLV++ + F M IEP
Sbjct: 512 EHGKFEEALGLFPLMDIDGVRPNDVTFINVFLACTHAGLVDKAWELFLCMVEECGIEPSE 571
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
+H C+VD+LGRAG L EA I +M P +W LLGA + H ++D + AA+ +E
Sbjct: 572 KHCGCVVDLLGRAGKLEEAEKFIANMEARPGAVIWMTLLGACKLHGDIDRGRFAAEKAIE 631
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGN--RVRMKKKLKRIRKS 568
++P + PYV L+ ++ G K + + R R+ ++ +R+++S
Sbjct: 632 IDPADSGPYVALASIFMAAGMKDEADKLRKRLSEQQRRLKQS 673
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 194/431 (45%), Gaps = 54/431 (12%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAAR 92
MP +V+ +I G F EAE LY +P
Sbjct: 1 MPQVGSVAATVVILALAEEGHFAEAENLYCFIP--------------------------- 33
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
EKD + +M++ Y + G V +AR +FD + +VV+WT+M+ +D
Sbjct: 34 ------EKDTASMNAMINLYGRTGDVSQARTVFDAIKNPDVVSWTSMLQANALSGHLQDA 87
Query: 153 FDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
+LF +M +R +N++ F V L+ + ++++ ++T
Sbjct: 88 KNLFRAMPQRNDYCWNTML---------NGFASHGDVTTACLILQLMPQHNVVSWTIMLT 138
Query: 212 MYGRLGFMDEANKVFSMMS--KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
Y G + A VF + RD V+WN L N ++EA + E+MP V+
Sbjct: 139 AYAERGHLALALSVFDSVPARTRDVVTWNVLAQALAGNFHVDEAMLVLEKMPHHSLVAVN 198
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+MIT + G+ + LF MP ++ V+W+A I + E+ ML + V+P
Sbjct: 199 SMITAHAQAGHAHVARHLFKNMPARNVVSWSATIGAYAQAGYIPESLELVRAMLLEGVKP 258
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N++TL ++L+ L G +H + + D +QN L+ +Y KCG V +A +IF
Sbjct: 259 NEVTLVAILTGCTPE-HLAIGRAVHQQIARSGDARDRFVQNLLIQMYGKCGAVQEARKIF 317
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE-----GLVPNQITFLSVLSACNH 444
I ++N+ S+N MI + NGL + AL+L+++M GL N + ++++A +
Sbjct: 318 DAIADKNVFSWNIMIGAYVNNGLDDHALDLYKRMAPALPSALGLETNPVVATALINAFSA 377
Query: 445 VGLV---EEGF 452
G + EE F
Sbjct: 378 AGSLLSAEEAF 388
>gi|347954456|gb|AEP33728.1| chlororespiratory reduction 21, partial [Brassica oleracea]
Length = 643
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 188/593 (31%), Positives = 319/593 (53%), Gaps = 23/593 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
+A ++F +P RN V++ A++ G+V+ GM EA L +M P R S C +A
Sbjct: 37 DARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASA 96
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G ++ G+ A + + E D + S+++ YCK G + A +FD+M K+VV W
Sbjct: 97 NMGGVEEGKXSHALAVVNGL-ELDNILGTSILNFYCKVGLIDYAEMVFDRMIGKDVVTWN 155
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ GY++ ED + MR + F+ +TL+ L R + G +V R
Sbjct: 156 LLISGYVQQGLVEDAIRMCQLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRH 215
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
F+ DI+L ++ + MY + G + +A KVF ++D + WN+L++ Y +G EA RLF
Sbjct: 216 SFESDIVLASAAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLF 275
Query: 258 -----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVN 308
E +P + ++W +I G ++++ E+F M V+WT +++G V
Sbjct: 276 YEMQLESVP-PNVITWNLIILSLLRNGQVDEAKEMFLQMQSSGIVPTIVSWTTMMNGLVX 334
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VS 367
N EEA + +M +RPN +++ LSA A A+L+ G +H ++++ + S VS
Sbjct: 335 NGCSEEAIHYLRKMQESGMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVS 394
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I+ SLV +Y+KCG++ A ++F + YN+MIS +A G EEA+ L+ ++D G
Sbjct: 395 IETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAMISAYALYGNVEEAMALYGSLEDMG 454
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ P+ ITF ++LSACNH G + + F M + + ++P EHY MVD+L AG +A
Sbjct: 455 IKPDNITFTNILSACNHAGDINQAIEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKA 514
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ L+ M +EP + +LL +L + ++ L+E EPD++ YV +S+ Y+
Sbjct: 515 LRLMEEMPYEPDARMIQSLLATCNKEHKTELVEYLSKQLLESEPDNSGNYVTISNAYAGE 574
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILK----DKVHLFLAGRKSCLDLKEI 596
G + ++R K K ++K PGCSWI +K + V +F+A K+ L EI
Sbjct: 575 GSWDEVVKMREMMKAKGLKKQPGCSWIRVKREEEEXVQVFVANDKTHLRNNEI 627
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 225/460 (48%), Gaps = 31/460 (6%)
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
V S+ D Y K G + +AR++FD++PE+NVVAW A++ GY++ E+ L MR
Sbjct: 19 VFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMRE 78
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
G+ +T++ A EG H L G + D ILG SI+ Y ++G +D
Sbjct: 79 EGVEPTRVTVSTCLSASANMGGVEEGKXSHALAVVNGLELDNILGTSILNFYCKVGLIDY 138
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSS 277
A VF M +D V+WN LISGYV G +E+A R+ + M + D V+ +T+++ +
Sbjct: 139 AEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKLKFDCVTLSTLMSTAAR 198
Query: 278 KGN--LEKSIELFNMMP--EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
N L K ++ + + E D V +A + + +A + F ++KD+ +
Sbjct: 199 TQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAKKVFDSTVQKDL----IL 254
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+++L+A A + + ++ + ++ +V N ++ + G V +A +F +
Sbjct: 255 WNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKEMFLQMQ 314
Query: 394 ER----NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----H 444
IVS+ +M++G NG EEA++ RKM++ G+ PN + LSAC H
Sbjct: 315 SSGIVPTIVSWTTMMNGLVXNGCSEEAIHYLRKMQESGMRPNVFSITVALSACANLASLH 374
Query: 445 VGLVEEGFIYFKSM-KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
G G+I + + +IE +VD+ + G +++A + F P ++
Sbjct: 375 FGRSVHGYIIRNRLHSSSVSIETS------LVDMYAKCGDISKAEKVFRRKLFSELP-LY 427
Query: 504 GALLGAGRTHLNLD--LAKLAAQHLMELEPDSATPYVVLS 541
A++ A + N++ +A + M ++PD+ T +LS
Sbjct: 428 NAMISAYALYGNVEEAMALYGSLEDMGIKPDNITFTNILS 467
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 184/347 (53%), Gaps = 40/347 (11%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G VHG V++ G D + + +S+ MYG+ G +D+A KVF + +R+ V+WN+L+ GYV
Sbjct: 3 GRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQ 62
Query: 247 NGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK-----------SIEL---- 287
NG EEA RL M + V+ +T ++ ++ G +E+ +EL
Sbjct: 63 NGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKXSHALAVVNGLELDNIL 122
Query: 288 --------------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
F+ M KD VTW +ISG+V E+A R M + +
Sbjct: 123 GTSILNFYCKVGLIDYAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKL 182
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+ + +TLS+++S +A T G ++ + ++ + ESD+ + ++ V +Y+KCG++VDA +
Sbjct: 183 KFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAKK 242
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + +++++ +N++++ +A++GL EAL LF +M+ E + PN IT+ ++ + G
Sbjct: 243 VFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQ 302
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
V+E F M++ I P + M++ L G EAI + M
Sbjct: 303 VDEAKEMFLQMQS-SGIVPTIVSWTTMMNGLVXNGCSEEAIHYLRKM 348
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/474 (35%), Positives = 264/474 (55%), Gaps = 37/474 (7%)
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
+M R G+ ++IT + L + C +EG +VH + G++ + + N+++ MY +
Sbjct: 45 AMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFN 104
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGE---------------------IEEAYRL 256
++EA +F M +R+ VSW ++IS Y + R
Sbjct: 105 LLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRA 164
Query: 257 FERMPG--------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
+ +P D + +I +S +L+ ++ +F+ MP +D V W +I
Sbjct: 165 CDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSI 224
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
I GF N EA F M R +Q TL+SVL A A L G Q+H HV+K
Sbjct: 225 IGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKF-- 282
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+ D+ + N+L+ +Y KCG++ DA F+ + E++++S+++M++G AQNG +AL LF
Sbjct: 283 DQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFES 342
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
MK+ G PN IT L VL AC+H GLVE+G+ YF+SMK L+ ++PG EHY C++D+LGRAG
Sbjct: 343 MKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAG 402
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L EA+ LI+ M EP W LLGA R H N+DLA AA+ ++ELEP+ A Y++LS+
Sbjct: 403 RLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSN 462
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
+Y+ + D VR + IRK+PGCSWI + ++H+F+ G S ++EI
Sbjct: 463 IYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEI 516
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 162/335 (48%), Gaps = 32/335 (9%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
EA ++F MP RN VS+ MI+ + + + +A + + M +R+ V N Y V
Sbjct: 108 EAEDLFDEMPERNVVSWTTMISAYSNK-LNDKALKCLILM---FREGVRPNMFT--YSSV 161
Query: 85 GRCEEA--------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
R + I + +E DV +++D Y K + A +FD+MP +++V W
Sbjct: 162 LRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVW 221
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+++ G+ + + +LF M+R G + TLT + AC G QVH V
Sbjct: 222 NSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVH--VHV 279
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
FD D+IL N++I MY + G +++AN FS M ++D +SW+++++G NG +A L
Sbjct: 280 LKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALEL 339
Query: 257 FERMPGK----DFVSWTTMITGFSSKGNLEKS-------IELFNMMPEKDDVTWTAIISG 305
FE M ++++ ++ S G +EK +LF + P ++ + +I
Sbjct: 340 FESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREH--YGCLIDL 397
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+ +EA + EM + P+ +T ++L A
Sbjct: 398 LGRAGRLDEAVKLIHEM---ECEPDSVTWRTLLGA 429
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 171/414 (41%), Gaps = 78/414 (18%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIF 125
D++ + LI G +E R+ E + E + ++++ Y K + EA ++F
Sbjct: 54 DAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLF 113
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
D+MPE+NVV+WT M+ Y + + M R G+ N T + + AC R
Sbjct: 114 DEMPERNVVSWTTMISAYSN-KLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR 172
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
Q+H + + G + D+ + +++I +Y + +D A VF M RD V WNS+I G+
Sbjct: 173 ---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFA 229
Query: 246 HNGEIEEAYRLFERMP-------------------------------------GKDFVSW 268
N + EA LF+RM +D +
Sbjct: 230 QNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILN 289
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+I + G+LE + F+ M EKD ++W+ +++G N +A F M R
Sbjct: 290 NALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSR 349
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN +T+ VL A + + +G S+ L+ VD R
Sbjct: 350 PNYITVLGVLFACSHAGLVEKGWYYF---------------RSMKKLFG-----VDPGR- 388
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
Y +I + G +EA+ L +M+ E P+ +T+ ++L AC
Sbjct: 389 ---------EHYGCLIDLLGRAGRLDEAVKLIHEMECE---PDSVTWRTLLGAC 430
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
+ F + A R M R V + +T S ++ +A + +G ++H H+ E
Sbjct: 28 ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ + N+L+++Y K + +A +F + ERN+VS+ +MIS ++ N L ++AL M
Sbjct: 88 PKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILM 146
Query: 424 KDEGLVPNQITFLSVLSACN--------HVGLVEEGF 452
EG+ PN T+ SVL AC+ H G+++ G
Sbjct: 147 FREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGL 183
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 179/596 (30%), Positives = 319/596 (53%), Gaps = 49/596 (8%)
Query: 52 GMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD- 110
G+F + +EL + DS ++ G+ + E R+ +++ ++ ++V+
Sbjct: 144 GLFEKMQELGIR-----GDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNS 198
Query: 111 ---GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
Y K G V AR +FD++ +++VV+W +M+ G +G + F+ M G+ +
Sbjct: 199 LIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVD 258
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
S TL + AC G +H + GF ++ N+++ MY + G ++ AN+VF
Sbjct: 259 SATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFV 318
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEK 283
M + VSW S+I+ +V G EA LF+ M K D + T+++ + +L+K
Sbjct: 319 KMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDK 378
Query: 284 SIE-----------------------------------LFNMMPEKDDVTWTAIISGFVN 308
E +F+ +P K+ V+W +I G+
Sbjct: 379 GREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQ 438
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
N EA + F++M +K ++P+ +T++ VL A A A L +G +IH H+++ SD+ +
Sbjct: 439 NSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHV 497
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
+LV +Y KCG +V A ++F I +++++ + MI+G+ +G G+EA++ F KM+ G+
Sbjct: 498 ACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGI 557
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
P + +F S+L AC H GL++EG+ F SMK+ NIEP EHYACMVD+L R+G+L+ A
Sbjct: 558 EPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAY 617
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
I +M +P +WGALL R H +++LA+ A+H+ ELEP++ YV+L+++Y+
Sbjct: 618 KFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAE 677
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
K + +++ + ++ GCSWI ++ K ++F AG S K I+ L+ ++
Sbjct: 678 KWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLT 733
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 219/434 (50%), Gaps = 47/434 (10%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D V +V Y G +++ R IFD + + W ++ Y K+ + + LF M+
Sbjct: 91 DEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQ 150
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF-DYDIILGNSIITMYGRLGFM 219
G+ +S T T + + + RE +VHG V + GF Y+ ++ NS+I Y + G +
Sbjct: 151 ELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVV-NSLIAAYFKCGEV 209
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--PGKDFVSWT-------- 269
+ A +F +S RD VSWNS+ISG NG F +M G D S T
Sbjct: 210 ESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVAC 269
Query: 270 -----------------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
T++ +S GNL + E+F M E V+WT
Sbjct: 270 ANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWT 329
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+II+ V + EA F EM K +RP+ ++SV+ A A + +L++G ++H H+ K
Sbjct: 330 SIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKN 389
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
NM S++ + N+L+++Y+KCG++ +A IF+ + +NIVS+N+MI G++QN L EAL LF
Sbjct: 390 NMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLF 449
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYAC-MVDIL 478
M+ + L P+ +T VL AC + +E+G I+ ++ Y + H AC +VD+
Sbjct: 450 LDMQKQ-LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDL---HVACALVDMY 505
Query: 479 GRAGSLAEAIDLIN 492
+ G L A L +
Sbjct: 506 VKCGLLVLAQQLFD 519
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 181/411 (44%), Gaps = 42/411 (10%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + + C +G +VH ++S G D +LG ++ MY G + + ++F +
Sbjct: 59 TYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGI 118
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSK------- 278
WN L+S Y G E+ LFE+M D ++T ++ GF++
Sbjct: 119 LNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECK 178
Query: 279 ----------------------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
G +E + LF+ + ++D V+W ++ISG N
Sbjct: 179 RVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNG 238
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+FI+ML V + TL +VL A A L G +HA+ VK V N
Sbjct: 239 FSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNN 298
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+ +YSKCGN+ A +F + E IVS+ S+I+ + GL EA+ LF +M+ +GL P
Sbjct: 299 TLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRP 358
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+ SV+ AC +++G +K N+ ++++ + GS+ EA +L
Sbjct: 359 DIYAVTSVVHACACSNSLDKGREVHNHIKK-NNMGSNLPVSNALMNMYAKCGSMEEA-NL 416
Query: 491 INSMTFEPPPGVWGALLGA-GRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
I S W ++G + L + +L +L+PD T VL
Sbjct: 417 IFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLKPDDVTMACVL 467
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 8/247 (3%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI---EEAYRLFERMPGK 263
N+ I + +G + A K+ S S+R + N+ S E+ E+ R+ +
Sbjct: 28 NAKICKFCEMGDLRNAMKLLSR-SQRSELELNTYCSVLQLCAELKSLEDGKRVHSIISSN 86
Query: 264 ----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
D V ++ + + G+L K +F+ + W ++S + Y E+ F
Sbjct: 87 GMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLF 146
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+M +R + T + VL AA+A + + ++H +V+K+ S ++ NSL++ Y KC
Sbjct: 147 EKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKC 206
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G V A +F + +R++VS+NSMISG NG L F +M + G+ + T ++VL
Sbjct: 207 GEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVL 266
Query: 440 SACNHVG 446
AC +VG
Sbjct: 267 VACANVG 273
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 187/566 (33%), Positives = 298/566 (52%), Gaps = 50/566 (8%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
S+++ Y K G V A + F PE ++++W M+ Y + + + F + R G+
Sbjct: 934 SLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKP 993
Query: 167 NSITLTILFEAC-----GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+ TL + AC G +F G QVH + G D + ++I +Y + G MDE
Sbjct: 994 DQFTLASVLRACSTGDEGEYFTL--GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDE 1051
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------- 260
A + D SWN+++ GY+ + + +A F M
Sbjct: 1052 AEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGC 1111
Query: 261 -----PGKDFVSWTTMITGFSSK--------------GNLEKSIELFNMMPEKDDVTWTA 301
GK ++ + GF++ G++ ++ELF + D+V WT
Sbjct: 1112 LINLKQGKQIQAYAIKL-GFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTT 1170
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+ISG++ N + A + M V+P++ T ++++ AS+ L QG QIHA+VVK++
Sbjct: 1171 MISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLD 1230
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
D + SLV +Y KCG+V DAYR+F +D R +V +N+M+ G AQ+G +EALNLFR
Sbjct: 1231 YSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFR 1290
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
M+ G+ P+++TF+ VLSAC+H GL E + YF +M Y I P EHY+C+VD LGRA
Sbjct: 1291 TMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRA 1350
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G + EA ++I SM F+ ++ ALLGA RT + + AK A L+ L+P ++ YV+LS
Sbjct: 1351 GRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLS 1410
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
++Y+ + D R KLK ++K PG SWI +K+KVHLF+ +S I ++
Sbjct: 1411 NIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIE 1470
Query: 602 TISKGTKEFDW--PKHDWSLLGLERD 625
+ K +E P D++LL +E +
Sbjct: 1471 DLMKRIREEGSYVPDTDFTLLDVEEE 1496
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 216/430 (50%), Gaps = 28/430 (6%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
LK+G+ ARI + D +++ Y K G + AR++FDK ++++V W +++
Sbjct: 627 LKLGK-RAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685
Query: 142 GYMKV--DCFE---DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
Y + +E +GF LF +R G + +TL L + C + VHG +
Sbjct: 686 AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
GF+ D+ + +++ +Y + G + +A +F M +RDAV WN ++ YV N +EA R
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805
Query: 257 FERMPGK----DFVSWTTMITGFSS------KGNLEK----SIELFNMMPEKDDVTWTAI 302
F DF + +I G +S K + E+ ++++F + W
Sbjct: 806 FSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKK 865
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
++ F++ Q A F +LR + + +TL +LSA+ L+ G QIHA V+K +
Sbjct: 866 LTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSF 925
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
V + NSL+++YSK G V A + F N E +++S+N+MIS +AQN L EA+ FR
Sbjct: 926 APVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRD 985
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEH----YACMVDI 477
+ +GL P+Q T SVL AC+ +EG + S +Y I+ G + ++D+
Sbjct: 986 LLRDGLKPDQFTLASVLRACS---TGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDL 1042
Query: 478 LGRAGSLAEA 487
+ G + EA
Sbjct: 1043 YSKGGKMDEA 1052
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/562 (24%), Positives = 249/562 (44%), Gaps = 70/562 (12%)
Query: 42 AAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK- 100
A++ + + G+ +A L+ MP R D+V N ++ Y++ +EA R F A
Sbjct: 756 GALVNIYCKYGLVGQARLLFDKMPER--DAVLWNVMLKAYVENSFQDEALRFFSAFHRSG 813
Query: 101 --------DVVAWGSMVDGYCKKGRVIE-----AREIFDKMPEKNVVAWTAMVDGYMKVD 147
V G D + R E A ++F N+ AW + ++
Sbjct: 814 FFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAG 873
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
D F ++ R + +S+TL I+ A G Q+H LV + F + + N
Sbjct: 874 QIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSN 933
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------P 261
S++ MY + G + A K F + D +SWN++IS Y N EA F + P
Sbjct: 934 SLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKP 993
Query: 262 GK-------------------------------------DFVSWTTMITGFSSKGNLEKS 284
+ FVS T +I +S G ++++
Sbjct: 994 DQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVS-TALIDLYSKGGKMDEA 1052
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
L + + D +W AI+ G++ + + +A F M + +++TL++ + AS
Sbjct: 1053 EFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCL 1112
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L QG QI A+ +K+ +D+ + + ++ +Y KCG++ +A +F I + V++ +MI
Sbjct: 1113 INLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMI 1172
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYN 463
SG+ +NG + AL+++ M+ G+ P++ TF +++ A + + +E+G I+ +K Y+
Sbjct: 1173 SGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYS 1232
Query: 464 IEPGPEHY--ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA-LLG-AGRTHLNLDLA 519
+ +H+ +VD+ + GS+ +A + M W A LLG A H++ L
Sbjct: 1233 L----DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVV-FWNAMLLGLAQHGHVDEALN 1287
Query: 520 KLAAQHLMELEPDSATPYVVLS 541
++PD T VLS
Sbjct: 1288 LFRTMQSNGIQPDKVTFIGVLS 1309
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 8/247 (3%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--VNMPARWRDSVCSNALISGYLK 83
A E+F + + V++ MI+G++ G A +Y + + D LI
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212
Query: 84 VGRCEEAARIFEAMVEKDV----VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
+ E+ +I +V+ D S+VD YCK G V +A +F KM + VV W AM
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ-VHGLVSRFG 198
+ G + ++ +LF +M+ G+ + +T + AC + E + + +G
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332
Query: 199 FDYDIILGNSIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
+I + ++ GR G + EA N + SM K A + +L+ G+ E A R+
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVA 1392
Query: 258 ERMPGKD 264
+++ D
Sbjct: 1393 DKLLALD 1399
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 185/592 (31%), Positives = 314/592 (53%), Gaps = 39/592 (6%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNALISG 80
+Y A ++F +P + + MI G+ R LY M D L+ G
Sbjct: 85 VYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKG 144
Query: 81 Y-----LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+ LK G+ + ++ ++ + + G V AR+IFD VV
Sbjct: 145 FTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVT 204
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGG--MAFNSITLTILFEACGRFFRYREGVQVHGL 193
W ++ GY + +E+ LF+ M + ++ NS+TL ++ AC +
Sbjct: 205 WNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKL------------ 252
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
D++ G I Y + G + E N + N+LI + GE++ A
Sbjct: 253 -------KDLVGGKCIYNKYIKEGIV-EPNLILE----------NALIDMFASCGEMDAA 294
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+F+ M +D +SWT+++TGF++ ++ + + F+ MPE+D V+WTA+I G++ +++
Sbjct: 295 RGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFK 354
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
E F +M +V+P++ T+ S+L+A A L G ++ K +++D I N+L+
Sbjct: 355 EVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALI 414
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y KCGNV A +IF + +++ ++ +MI G A NG GEEAL +F M + + P++I
Sbjct: 415 DMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEI 474
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
T++ V+ AC HVGLV +G +F +M + I+P HY CMVD+LGRAG L EA+++I +
Sbjct: 475 TYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMN 534
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
M +P VWG+LLGA R H N+ LA++AA ++ELEP++ YV+L ++Y+ K ++
Sbjct: 535 MPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNL 594
Query: 554 NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
+ VR + I+K PGCS + + V+ F+AG KS KEI L+ + +
Sbjct: 595 HNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQ 646
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 9/251 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+ +++T N C I A + F MP R+ VS+ AMI G++R F E L
Sbjct: 301 MKTRDVISWTSIVTGFANT-CRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTL 359
Query: 61 Y--VNMPARWRDSVCSNALISGYLKVGRCE--EAARIF--EAMVEKDVVAWGSMVDGYCK 114
+ + M D ++++ +G E E A+ + + ++ D +++D Y K
Sbjct: 360 FRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFK 419
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G V +A++IF++M +K+ WTAM+ G E+ +F M + + IT +
Sbjct: 420 CGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGV 479
Query: 175 FEACGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKR 232
AC +G + + G ++ ++ + GR G + EA +V +M K
Sbjct: 480 MCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKP 539
Query: 233 DAVSWNSLISG 243
+++ W SL+
Sbjct: 540 NSIVWGSLLGA 550
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV--SLYSKCGNVVDAY 386
P + S +S T+ + +QIH+ +K + S+ ++ + G+V A
Sbjct: 30 PLHSFVKSPISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYAR 89
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
++F I + ++ +N+MI G+++ E ++L++ M + P+ TF
Sbjct: 90 KVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTF 138
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 302/558 (54%), Gaps = 54/558 (9%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGR-VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
A + ++ +E D S++ Y K G E R++FD + K+V++WT+M+ GY++V
Sbjct: 142 AHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKP 201
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
+ +LF M G+ N+ TL+ + +AC + G HG+V GFD + ++ +++
Sbjct: 202 MNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASAL 261
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-------- 261
I M+GR +D+A ++F + + DA+ W S+IS N +EA R F M
Sbjct: 262 IDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPD 321
Query: 262 -------------------GKDFVSWTTMITGFSSK--------------GNLEKSIELF 288
GK+ V + TGF G++ +S +F
Sbjct: 322 GFTFGTVLTACGNLGRLKQGKE-VHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIF 380
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ MP K+ V+W+A++ G+ N F+ I++ RK + + ++L A A +
Sbjct: 381 DRMPIKNSVSWSALLGGYCQNGD----FKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVR 436
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
QG ++H ++ DV ++++LV LY+KCG + A IF + RN++++NSMI GFA
Sbjct: 437 QGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFA 496
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
QNG GEEAL +F +M EG+ P+ I+F+ +L AC+H GLV+EG YF SM Y I+ G
Sbjct: 497 QNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGI 556
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
EHY+CMVD+LGRAG L EA LI + F +W ALLGA T N ++A+ A+ +ME
Sbjct: 557 EHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVME 616
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV-------H 581
LEPD YV+L+++Y +G+ D R+R K + + K PG SWI K+ + +
Sbjct: 617 LEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNLGSSFDFEN 676
Query: 582 LFLAGRKSCLDLKEIEVT 599
+ G + LD++E+++
Sbjct: 677 SLVPGESNFLDVEELQMA 694
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 240/520 (46%), Gaps = 90/520 (17%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N+++T E ++F + +++ +S+ +MI+G+VR G + EL+ M A
Sbjct: 157 NSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY-- 214
Query: 70 DSVCSNAL-ISGYLKVGRCEE-----AARIFEAMV-----EKDVVAWGSMVDGYCKKGRV 118
V NA +S +K C E RIF +V + + V +++D + + +
Sbjct: 215 -GVEPNAFTLSAVIKA--CSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCAL 271
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEA 177
+AR++FD++ E + + WT+++ + D F++ F SM+R GM + T + A
Sbjct: 272 DDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTA 331
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
CG R ++G +VH V GF ++++ +S++ MYG+ G + E+ ++F M +++VSW
Sbjct: 332 CGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSW 391
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG----------------------- 274
++L+ GY NG+ + ++F +M D + T++
Sbjct: 392 SALLGGYCQNGDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGW 451
Query: 275 ------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
++ G +E + +F+ MP ++ +TW ++I GF N + EEA R F +M
Sbjct: 452 RDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQM 511
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQG-----SQIHAHVVKMNME-------------- 363
+++ ++P+ ++ +L A + +++G S + +K+ +E
Sbjct: 512 VKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGL 571
Query: 364 --------------SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI---VSYNSMISG 406
D S+ +L+ + C N A RI + E +SY + +
Sbjct: 572 LEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANV 631
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+ G +AL + R MKD G+ N++ S + N++G
Sbjct: 632 YKAVGRWNDALRIRRLMKDRGV--NKMPGKSWIETKNNLG 669
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 181/386 (46%), Gaps = 52/386 (13%)
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
L S+ G ++ + L + C + + G+Q+H V + G ++D +GNS++T+
Sbjct: 103 LQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTL 162
Query: 213 YGRLGF-MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG--------- 262
Y +LG E KVF + +D +SW S+ISGYV G+ + LF +M
Sbjct: 163 YFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFT 222
Query: 263 ------------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
++V + +I L+ + +LF+ +
Sbjct: 223 LSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELL 282
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGS 351
E D + WT+IIS N+ ++EA R+F M R + P+ T +VL+A L QG
Sbjct: 283 EPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGK 342
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
++HA V+ +V +++SLV +Y KCG+V ++ RIF + +N VS+++++ G+ QNG
Sbjct: 343 EVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNG 402
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
+ + +FRKM+ L F ++L C + V +G K + Y + G
Sbjct: 403 DFKSVIQIFRKMEKVDLY----CFGTILRTCAGLAAVRQG----KEVHCQYIRKGGWRDV 454
Query: 472 ---ACMVDILGRAGSLAEAIDLINSM 494
+ +VD+ + G + A + + M
Sbjct: 455 IVESALVDLYAKCGCIEYAQTIFDQM 480
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%), Gaps = 22/251 (8%)
Query: 323 LRKDVRPNQLTLSSVLSAS-----AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
L K + P +++ VL AS N G QIHAHV+K +E D + NSL++LY
Sbjct: 105 LLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYF 164
Query: 378 KCG-NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
K G + + ++F + ++++S+ SMISG+ + G +L LF KM G+ PN T
Sbjct: 165 KLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLS 224
Query: 437 SVLSACNHVGLVEEGFIYF-----KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
+V+ AC+ +G ++ G I+ + + Y I + ++D+ GR +L +A L
Sbjct: 225 AVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIA------SALIDMHGRNCALDDARQLF 278
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAK---LAAQHLMELEPDSATPYVVLSDLYSVIG 548
+ + EP W +++ A + D A + Q + PD T VL+ + +G
Sbjct: 279 DEL-LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN-LG 336
Query: 549 KKRDGNRVRMK 559
+ + G V K
Sbjct: 337 RLKQGKEVHAK 347
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 205/614 (33%), Positives = 310/614 (50%), Gaps = 56/614 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A + P+ A+ AA+++G AE+ +V +++L+ Y+++G
Sbjct: 26 ALKSCPAQPLARALHAAAVVSGL--------AEDPFV-----------ASSLLHSYIRLG 66
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP----EKNVVAWTAMVD 141
A +F+ M EK+VV W +++ GY +G A + ++M E NV+ W +V
Sbjct: 67 ATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVS 126
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G + D + M G ++ ++ A G G QVHG V + G
Sbjct: 127 GLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRL 186
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D + ++I MYG+ G DE +VF S D S N+L++G N ++ EA LF
Sbjct: 187 DACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLF---- 242
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
++F+ + +EL + V+WT+I++ V N + EA F
Sbjct: 243 -REFIC---------------RGVEL-------NVVSWTSIVACCVQNGRDLEAVDLFRT 279
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M V PN +T+ VL A A A L G H ++ DV + ++LV +Y+KCG
Sbjct: 280 MQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGK 339
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
A IF + RN+VS+N+MI G+A +G A+ LF M+ P+ +TF VL A
Sbjct: 340 ARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGA 399
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C+ GL EEG YF M+ + I P EHYACMV +LGR+G L EA DLIN M FEP
Sbjct: 400 CSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSC 459
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG-NRVRMKK 560
+WG+LLG+ R + N+ LA++AA+ L +LEP +A YV+LS++Y+ K DG NRVR +
Sbjct: 460 IWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYAS-KKMWDGVNRVRDEM 518
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSL 619
K ++K GCSWI +K+KVH+ LAG S + I L ++ + P D+ L
Sbjct: 519 KNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVL 578
Query: 620 LGLERDWSYTADNI 633
+E DNI
Sbjct: 579 HDVEEQ---EKDNI 589
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 122/307 (39%), Gaps = 87/307 (28%)
Query: 7 ASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYV 62
AS NA++ L + N + EA +F R N VS+ +++ V+ G EA +L+
Sbjct: 220 ASCNALVAGL-SRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFR 278
Query: 63 NM----------------PA--------RWRDSVC-------------SNALISGYLKVG 85
M PA R + C +AL+ Y K G
Sbjct: 279 TMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCG 338
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM----PEKNVVAWTAMVD 141
+ A IF+AM ++VV+W +M+ GY G A ++F M + ++V +T ++
Sbjct: 339 KARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLG 398
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
+ E+G F M++G + I+ + AC
Sbjct: 399 ACSQAGLTEEGRRYFNEMQQG----HGISPRMEHYAC----------------------- 431
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLIS-----GYVHNGEIEEAYR 255
++T+ GR G +DEA + + M + D+ W SL+ G V E+ A +
Sbjct: 432 -------MVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEV-AAEK 483
Query: 256 LFERMPG 262
LF+ PG
Sbjct: 484 LFQLEPG 490
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 186/531 (35%), Positives = 286/531 (53%), Gaps = 33/531 (6%)
Query: 76 ALISGY-LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
AL+SG +K G A+ + + V+ G+++ Y G V + R++FD+M + +V
Sbjct: 100 ALVSGQEVKEGEEVHASVVRTGFACSEFVS-GALLGFYVACGLVGKGRQVFDEMRQPGLV 158
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
WT ++ Y+ V E +LF +MR G+ + + ++ + ACG +H +
Sbjct: 159 LWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFI 218
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G + D + +++I+ YG G ++ AY
Sbjct: 219 EKSGIEVDAFVSSTLISTYGEC-------------------------------GSLDYAY 247
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
R F+ P K+ V W TMI NLE +LF MP++D V+W ++I GF QY+E
Sbjct: 248 RFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQE 307
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A WF EM V PN LTL S LSA A+ L+ G+ IHA+V K +M D S+ +SL+
Sbjct: 308 ALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLID 367
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSKCG++ A +IF R++ ++ S++ G A +G GE+AL+ F KMK+ + P+ +T
Sbjct: 368 MYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVT 427
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ VLSAC H GL+++G+ YF+SM+ ++ + P EHY MVD+LGR G L EA DLI M
Sbjct: 428 MVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGM 487
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
E +WGA L A R H N++L ++AA+ L+ L P V+LS++Y+ K
Sbjct: 488 PMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDPWARVMLSNMYAEEAKWDRSM 547
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
+R + K K ++KSPGCS I + VH FL G S EI ++ I K
Sbjct: 548 GLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEK 598
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 131/277 (47%), Gaps = 10/277 (3%)
Query: 25 EAFEIFATM------PMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI 78
+A E+F TM P AVS G + +A ++ D+ S+ LI
Sbjct: 175 KALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLI 234
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
S Y + G + A R F+ K++V W +M+ + + +++F MP+++VV+W +
Sbjct: 235 STYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNS 294
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ G+ ++ +++ F M G++ N++TL AC G +H V +
Sbjct: 295 MIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKND 354
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ D L +S+I MY + G +D+A ++F ++RD +W S++ G +G E+A F
Sbjct: 355 MNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFS 414
Query: 259 RMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
+M D V+ +++ + G L++ F M
Sbjct: 415 KMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSM 451
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 22/244 (9%)
Query: 298 TWTAIISGFVNNE--QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
W +I V N + ++++ LR +RPN T +L A + + +G ++HA
Sbjct: 56 VWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHA 115
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
VV+ + +L+ Y CG V ++F + + +V + +I + E+
Sbjct: 116 SVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEK 175
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY---NIEPGPEHYA 472
AL LFR M++ GL P+ + +V+SAC +G + K+M IE +
Sbjct: 176 ALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVA----KAMHCFIEKSGIEVDAFVSS 231
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPG----VWGALLGAGRTHLNLDLAKLAAQHLME 528
++ G GSL A F+ P VW ++ H NL+L K L +
Sbjct: 232 TLISTYGECGSLDYAYRF-----FQETPMKNIVVWNTMIHQSVEHNNLELGK----QLFQ 282
Query: 529 LEPD 532
PD
Sbjct: 283 SMPD 286
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 114/286 (39%), Gaps = 49/286 (17%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ A+ F PM+N V + MI V ++L+ +MP RD V N++I G+
Sbjct: 242 SLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPD--RDVVSWNSMIGGF 299
Query: 82 LKVGRCEEAARIFEAMV----------------------EKDVVAW-------------- 105
++G+ +EA F M D AW
Sbjct: 300 ARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDG 359
Query: 106 ---GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
S++D Y K G + +A +IF++ +++ WT++V G E F M+
Sbjct: 360 SLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEA 419
Query: 163 GMAFNSITLTILFEACGRFFRYREG-VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+ + +T+ + AC +G + FG + ++ + GR+G + E
Sbjct: 420 QVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKE 479
Query: 222 A-NKVFSMMSKRDAVSWNSLISGY-VHN----GEIEEAYRLFERMP 261
A + + M + + + W + +S VHN GE+ A RL P
Sbjct: 480 AYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEV-AARRLLGLXP 524
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 175/524 (33%), Positives = 291/524 (55%), Gaps = 41/524 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV ++V+ Y K G + +AR++FD MP ++V W +M+ Y + + F +F M+
Sbjct: 44 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 103
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G + +T + +AC + G V +S F+ D+ +G ++ITMY R +
Sbjct: 104 HEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 163
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFS 276
A +VF M +++ ++W+++I+ + +G EA R F M + V++ +++ GF+
Sbjct: 164 NAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 223
Query: 277 SKGNLEK-------------------SIELFNM------------------MPEKDDVTW 299
+ LE+ S L N+ M E+ W
Sbjct: 224 TPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAW 283
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+I+G+ + + EA + + + + +++T SVL+A ++ +L +G IH++ V+
Sbjct: 284 NVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE 343
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
++SDV ++N+L ++YSKCG++ +A RIF ++ R+ VS+N M+ +AQ+G EE L L
Sbjct: 344 CGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKL 403
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
RKM+ EG+ N ITF+SVLS+C+H GL+ EG YF S+ IE EHY C+VD+LG
Sbjct: 404 IRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLG 463
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L EA I+ M EP W +LLGA R H +LD KLAA+ L+EL+P +++ VV
Sbjct: 464 RAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVV 523
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
LS++YS G ++ ++R +R++K PG S I +K+KVH F
Sbjct: 524 LSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEF 567
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 177/374 (47%), Gaps = 51/374 (13%)
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R+G +H V D+ + +++ Y + G + +A KVF M R +WNS+IS Y
Sbjct: 27 RKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAY 86
Query: 245 VHNGEIEEAYRLFERMP--------------------------GK-------------DF 265
+ EA+ +F+RM GK D
Sbjct: 87 SISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDL 146
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
T +IT ++ + E + ++F M +K+ +TW+AII+ F ++ EA R+F M ++
Sbjct: 147 FVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQE 206
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC--GNVV 383
+ PN++T S+L+ + L + S+IH + + ++ ++ N+LV++Y +C G +
Sbjct: 207 GILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELD 266
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A I +DE+ I ++N +I+G+ +G EAL +++++ E + +++TF+SVL+AC
Sbjct: 267 VAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACT 326
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYA----CMVDILGRAGSLAEAIDLINSMTFEPP 499
+ EG + + +E G + + ++ + GS+ A + +SM
Sbjct: 327 SSTSLAEGKMIHSNA-----VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSA 381
Query: 500 PGVWGALLGAGRTH 513
W +L A H
Sbjct: 382 VS-WNGMLQAYAQH 394
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 189/443 (42%), Gaps = 52/443 (11%)
Query: 14 TALINN--NC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR- 69
TAL+N C S+ +A ++F MP R+ ++ +MI+ + EA ++ M
Sbjct: 49 TALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGER 108
Query: 70 -DSVCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREI 124
D V +++ + + + E++ E D+ +++ Y + A ++
Sbjct: 109 CDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQV 168
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F +M +KN++ W+A++ + + F M++ G+ N +T L
Sbjct: 169 FGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL 228
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRL--GFMDEANKVFSMMSKRDAVSWNSLIS 242
E ++H L++ G D + N+++ +YGR G +D A + M ++ +WN LI+
Sbjct: 229 EELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLIN 288
Query: 243 GYVHNGEIEEAYRLFERMP--------------------------GK------------- 263
GY +G EA ++R+ GK
Sbjct: 289 GYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDS 348
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
D + + +S G++E + +F+ MP + V+W ++ + + + EE + +M
Sbjct: 349 DVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKME 408
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQ-IHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
++ V+ N +T SVLS+ + + +G Q H+ +E LV L + G +
Sbjct: 409 QEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKL 468
Query: 383 VDAYRIFTNI-DERNIVSYNSMI 404
+A + + + E IV++ S++
Sbjct: 469 QEAEKYISKMPSEPEIVTWASLL 491
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 135/326 (41%), Gaps = 18/326 (5%)
Query: 3 DRTSASYNAMITALINNNCSIYE---AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
D T+ NA++ + C E A I M + ++ +I G+ G EA E
Sbjct: 244 DDTTTMSNALVN--VYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALE 301
Query: 60 LY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYC 113
Y + + A D V ++++ E I VE DV+ ++ + Y
Sbjct: 302 TYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYS 361
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G + AR IFD MP ++ V+W M+ Y + E+ L M + G+ N IT
Sbjct: 362 KCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVS 421
Query: 174 LFEACGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM-SK 231
+ +C EG Q H L G + ++ + GR G + EA K S M S+
Sbjct: 422 VLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSE 481
Query: 232 RDAVSWNSLISGYVHNGEIEE----AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
+ V+W SL+ + +++ A +L E PG S + +S +G+ + + +L
Sbjct: 482 PEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSAS-VVLSNIYSERGDWKNAAKL 540
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYE 313
M + I S V N+ +E
Sbjct: 541 RRAMASRRVKKVPGISSIQVKNKVHE 566
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 75/121 (61%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
ML + V+ N +T +VL++ L +G IH+ V + DV + +LV+ Y+KCG+
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ DA ++F + R++ ++NSMIS ++ + EA +F++M+ EG +++TFLS+L A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 442 C 442
C
Sbjct: 121 C 121
>gi|356518777|ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 737
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 296/560 (52%), Gaps = 92/560 (16%)
Query: 70 DSVCSNALISGYLKVGRCEEAA-RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
D+ +N LI Y K G CEE+A + F + K +W +++ Y K G EA +FDKM
Sbjct: 44 DAFLANGLIDAYSKCG-CEESAHKTFGDLPNKTTRSWNTLISFYSKTGFFDEAHNLFDKM 102
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P++NVV++ +++ G ++ + R
Sbjct: 103 PQRNVVSYNSLISGNLQ-----------------------------------WLR----- 122
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
QVHG+ G ++++IL N++I YG+ G + + VF M +R+ VSW S++ Y
Sbjct: 123 QVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSMVVAYTRAC 182
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
++EA R+F+ MP K+ VSWT ++TGF V
Sbjct: 183 RLDEACRVFKDMPVKNTVSWTALLTGF-------------------------------VR 211
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES---D 365
N +EAF F +ML + VRP+ T SV+ A A A + +G Q+H +++ + +
Sbjct: 212 NGGCDEAFDVFKQMLEEGVRPSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGNLFN 271
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
V + N+L+ +Y+KCG++ A +F R++V++N++I+GFAQNG GEE+L +FR+M +
Sbjct: 272 VYVCNALIDMYAKCGDMKSAENLFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIE 331
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
+ PN +TFL VLS CNH GL EG M+ Y ++P EHYA ++D+LGR L
Sbjct: 332 AKVEPNHVTFLGVLSGCNHAGLDNEGLQLVDLMERQYGVKPKAEHYALLIDLLGRRNRLM 391
Query: 486 EAIDLINSMTFEPPPG------VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
EA+ LI + P G VWGA+LGA R H NLDLA+ AA+ L ELEP++ YV+
Sbjct: 392 EAMSLIEKV----PDGIKNHIAVWGAVLGACRVHGNLDLARKAAEKLFELEPENTGRYVM 447
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI--- 596
L+++Y+ GK R+R K + + K P CS I L++ H F+A K ++EI
Sbjct: 448 LANIYAASGKWGGAKRIRNVMKERCLEKEPACSRIELRNARHEFVAKDKFHPQVEEICEV 507
Query: 597 --EVTLQTISKGTKEF-DWP 613
++ L + G + + D+P
Sbjct: 508 NSKLVLHSKDAGYQPYTDYP 527
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 162/298 (54%), Gaps = 11/298 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+ ++T+ S+N +I+ + EA +F MP RN VSY ++I+G ++ + +
Sbjct: 71 LPNKTTRSWNTLIS-FYSKTGFFDEAHNLFDKMPQRNVVSYNSLISGNLQ--WLRQVHGV 127
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
V + W + + +NALI Y K G + +F M E++VV+W SMV Y + R+ E
Sbjct: 128 AVIVGMEW-NVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSMVVAYTRACRLDE 186
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F MP KN V+WTA++ G+++ ++ FD+F M G+ ++ T + +AC +
Sbjct: 187 ACRVFKDMPVKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVSVIDACAQ 246
Query: 181 FFRYREGVQVHGLVSR---FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
G QVHG + R G +++ + N++I MY + G M A +F M RD V+W
Sbjct: 247 EALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAPMRDVVTW 306
Query: 238 NSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
N+LI+G+ NG EE+ +F RM + V++ +++G + G + ++L ++M
Sbjct: 307 NTLITGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGLDNEGLQLVDLM 364
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
ML DV + S ++S + + +H H++K + D + N L+ YSKCG
Sbjct: 1 MLPNDVISSVEKYSFLISKCITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGC 60
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
A++ F ++ + S+N++IS +++ G +EA NLF KM +V
Sbjct: 61 EESAHKTFGDLPNKTTRSWNTLISFYSKTGFFDEAHNLFDKMPQRNVV 108
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 171/508 (33%), Positives = 285/508 (56%), Gaps = 6/508 (1%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F+ KN+ + A++ G F + F M R G+ + +T + ++ F
Sbjct: 135 VFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFS 194
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR-----DAVSWN 238
G+ +H ++ R G + D + S++ MY ++ + A KVF +R A+ WN
Sbjct: 195 TELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWN 254
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
LI G G +++A +LF+ MP K+ VSW+T+I GF+ G++++++ELF+ MPEK+ V+
Sbjct: 255 VLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVS 314
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WT ++ GF N E+A F +ML + VRPN T+ S LSA A L G +IH ++
Sbjct: 315 WTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIK 374
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ ++ +LV +Y+KCGN+ A +F ++++I ++ MI G+A +G E+A+
Sbjct: 375 DNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIA 434
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F++M G+ P+++ FL++L+AC H G V+ G +F SM+ Y IEP +HY +VD+L
Sbjct: 435 CFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDML 494
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR+G L EA+ I M P +WGAL A R H +AK A L++LEP Y+
Sbjct: 495 GRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYI 554
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
LS+ Y+ +G+ D RVR+ + + + K+ G S I ++ +VH F++G D K I +
Sbjct: 555 FLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICL 614
Query: 599 TLQTISKGT-KEFDWPKHDWSLLGLERD 625
L+ I G K+ P +W L +E++
Sbjct: 615 KLEEIMAGAVKQGYIPGTEWVLHNMEQE 642
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 12/278 (4%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N LI G K G ++A ++F+AM +K+ V+W +++DG+ K G + A E+FD+MPEKNVV
Sbjct: 254 NVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVV 313
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WT MVDG+ + E +F M G+ N+ T+ AC + G+++H +
Sbjct: 314 SWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYI 373
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
G LG +++ MY + G ++ A++VF ++ +W +I G+ +G E+A
Sbjct: 374 KDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAI 433
Query: 255 RLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDDVTWTAIISG 305
F++M D V + ++T G ++ + F+ M E +T I+
Sbjct: 434 ACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDM 493
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ Q +EA R FIE R + P+ + ++ A A
Sbjct: 494 LGRSGQLKEALR-FIE--RMPMNPDFVIWGALFCACRA 528
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 67/258 (25%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T +I+ S + ++ S+ +FN K+ T+ A+I G N + A F MLR ++
Sbjct: 117 TQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIK 176
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P++LT VL + A + G IH +++ +E D ++ SLV +Y K + A+++
Sbjct: 177 PDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKV 236
Query: 389 FTNIDER----------NI--------------------------VSYNSMISGFAQ--- 409
F ER N+ VS++++I GFA+
Sbjct: 237 FDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGD 296
Query: 410 ----------------------------NGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
NG E+AL++F KM +EG+ PN T +S LSA
Sbjct: 297 MDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSA 356
Query: 442 CNHVGLVEEGFIYFKSMK 459
C +G +E G K +K
Sbjct: 357 CAKIGGLEAGLRIHKYIK 374
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%)
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+ P T + +S + T+ Q QIHA ++ N+ S I L+S S ++ +
Sbjct: 74 IPPTTPTEAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSL 133
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+F + +N+ ++N++I G N A+ FR M G+ P+++T+ VL +
Sbjct: 134 AVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKS 188
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 196/615 (31%), Positives = 325/615 (52%), Gaps = 48/615 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVNMPARWRDSVCS 74
S+ EA ++F + ++ ++ MI + ++G MFY+ +E V MP +
Sbjct: 54 SVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDV-MPTKVTYVAIL 112
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NA S E +I + E DV ++++ Y K G V A + F ++ ++VV
Sbjct: 113 NACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVV 172
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WTAM+ ++ D F L+ M+ G+ N ITL +F A G EG V+GLV
Sbjct: 173 SWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLV 232
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
S + D+ + NS + M+G G + +A ++F M RD V+WN +I+ YV N EA
Sbjct: 233 SSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAV 292
Query: 255 RLFERMPGKDF----VSWTTMITGFSSKGNLEK--------------------------- 283
RLF R+ +++ M+ ++S +L K
Sbjct: 293 RLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLY 352
Query: 284 --------SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ ++F M KD +TWT + + N +EA + F EM + RP TL
Sbjct: 353 GRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLV 412
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VL A A L +G QIH+H+++ ++ ++ +L+++Y KCG + +A +F + +R
Sbjct: 413 AVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKR 472
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+I+ +NSM+ +AQ+G +E L LF +M+ +G+ + ++F+SVLSA +H G V +G+ YF
Sbjct: 473 DILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYF 532
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV-WGALLGAGRTHL 514
+M ++I P PE Y C+VD+LGRAG + EA+D++ ++ P G+ W LLGA RTH
Sbjct: 533 VAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHN 592
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
D AK AA+ ++E +P + YVVLS++Y+ G NR+R + + ++K PG S I
Sbjct: 593 KTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSI 652
Query: 575 ILKDKVHLFLAGRKS 589
+ ++VH FL G +S
Sbjct: 653 EILNRVHEFLEGDRS 667
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 241/497 (48%), Gaps = 46/497 (9%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
E++ + G ++ Y + G V EA+++F+ + K+V AWT M+ Y + ++ +F
Sbjct: 36 EQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQ 95
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M+ + +T + AC ++G+++HG + + GF+ D+ +G ++I MY + G
Sbjct: 96 MQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGS 155
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK--------- 263
+ A F + RD VSW ++I+ V + + A L+ RM P K
Sbjct: 156 VRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNA 215
Query: 264 ----DFVSWTTMITGFSSKGNLEKSI--------------------ELFNMMPEKDDVTW 299
+++S + G S G +E + LF M ++D VTW
Sbjct: 216 YGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTW 275
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+I+ +V NE + EA R F + + V+ N +T +L+ + +L +G IH V +
Sbjct: 276 NIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 335
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ D + +L+SLY +C A++IF ++ ++++++ M +AQNG +EAL L
Sbjct: 336 AGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQL 395
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDIL 478
F++M+ EG P T ++VL C H+ +++G I+ ++ + +E E ++++
Sbjct: 396 FQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMY 453
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD--LAKLAAQHLMELEPDSATP 536
G+ G +AEA+ + M + VW ++LGA H D L L ++ D+ +
Sbjct: 454 GKCGKMAEAMSVFEKMA-KRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSF 512
Query: 537 YVVLSDLYSVIGKKRDG 553
VLS L S G DG
Sbjct: 513 VSVLSAL-SHSGSVTDG 528
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 162/326 (49%), Gaps = 41/326 (12%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L + C G +VH V GF+ + ++ +I MY + G + EA +VF ++ ++D
Sbjct: 10 LLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKD 69
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIEL-- 287
+W +I Y G+ + A +F +M +D V++ ++ +S +L+ +E+
Sbjct: 70 VFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHG 129
Query: 288 ---------------------------------FNMMPEKDDVTWTAIISGFVNNEQYEE 314
F + +D V+WTA+I+ V ++Q+
Sbjct: 130 QILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFAL 189
Query: 315 AFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A RW ++ D V PN++TL +V +A L++G ++ V MESDV + NS V
Sbjct: 190 A-RWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAV 248
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+++ G + DA R+F ++ +R++V++N +I+ + QN EA+ LF +++ +G+ N I
Sbjct: 249 NMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDI 308
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMK 459
TF+ +L+ + + +G + + +K
Sbjct: 309 TFVLMLNVYTSLTSLAKGKVIHELVK 334
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 111/218 (50%), Gaps = 8/218 (3%)
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ ++L ++ ++ G ++H HV E + + L+ +Y++CG+V +A +
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F ++ +++ ++ MI + Q G + AL +F +M++E ++P ++T++++L+AC
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 448 VEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
+++G I+ + ++ E ++++ + GS+ A D + W A+
Sbjct: 121 LKDGMEIHGQILQQ--GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVS-WTAM 177
Query: 507 LGAGRTHLNLDLAKLAAQHLMELE---PDSATPYVVLS 541
+ A H LA+ + M+L+ P+ T Y V +
Sbjct: 178 IAACVQHDQFALARWLYRR-MQLDGVVPNKITLYTVFN 214
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 293/532 (55%), Gaps = 41/532 (7%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
E DV S++ Y + G + +AR +FD+MP K+ V W M++GY+K +++ +F+
Sbjct: 179 ELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFME 238
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS--IITMYGRL 216
MRR NS+T + C G Q+HGLV G + D + N+ +I +Y +
Sbjct: 239 MRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKC 298
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-----ERM----------- 260
++ A K+F + D V ++ISGYV NG A +F ERM
Sbjct: 299 RDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVL 358
Query: 261 -----------------------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
G + ++ ++ G L+ + + F + +KD V
Sbjct: 359 PACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAV 418
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
W ++I+ N + EEA F +M + + +++S+ LSA A L+ G +IHA +
Sbjct: 419 CWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFM 478
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
++ SD+ +++L+ +YSKCGN+ A R+F ++E+N VS+NS+I+ + +G +++L
Sbjct: 479 MRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSL 538
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
NLF M +G+ P+ +TFL+++SAC H G V+EG YF+ M I EHYACMVD+
Sbjct: 539 NLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDL 598
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
GRAG L EA +INSM F P GVWG LLGA R H N++LA++A+++L +L+P ++ Y
Sbjct: 599 FGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYY 658
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
V+LS++++ G+ ++R K + ++K PGCSWI + + H+F+A +S
Sbjct: 659 VLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRS 710
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 219/474 (46%), Gaps = 47/474 (9%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y G ++A+ IF ++ W M+ G+ + F+ + M G + T
Sbjct: 91 YVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTF 150
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ +ACG G VH + GF+ D+ +G+S+I Y G + +A +F M
Sbjct: 151 PYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPS 210
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM-------------------PGKDFVSWTTMI 272
+D V WN +++GYV NG+ + A +F M + +++ + +
Sbjct: 211 KDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQL 270
Query: 273 TGFSSKGNLE------------------KSIEL----FNMMPEKDDVTWTAIISGFVNNE 310
G LE + +E+ F+ D V TA+ISG+V N
Sbjct: 271 HGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNG 330
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
A F +L++ +R N +TL+SVL A A A L G ++H H++K + +
Sbjct: 331 MNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGS 390
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+++ +Y+KCG + A++ F I +++ V +NSMI+ +QNG EEA++LFR+M G
Sbjct: 391 AIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKY 450
Query: 431 NQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
+ ++ + LSAC ++ + G I+ M+ + + E + ++D+ + G+L A
Sbjct: 451 DCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAE--SALIDMYSKCGNLDLACR 508
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNL-DLAKLAAQHLME-LEPDSATPYVVLS 541
+ ++M E W +++ A H L D L L + ++PD T ++S
Sbjct: 509 VFDTME-EKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIIS 561
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/516 (23%), Positives = 230/516 (44%), Gaps = 93/516 (18%)
Query: 19 NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI 78
N C I++A +F MP ++ V + M+ G+V+ G + A +++ M R ++ ++
Sbjct: 195 NGC-IHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEM--RRTETNPNSVTF 251
Query: 79 SGYLKVGRCEEAARI-FEAMVEKDVVAWG-----------SMVDGYCKKGRVIEAREIFD 126
+ L V C I F + + VV+ G +++D Y K V AR+IFD
Sbjct: 252 ACVLSV--CASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFD 309
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+ ++V TAM+ GY+ + ++F + + M NS+TL + AC
Sbjct: 310 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 369
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G ++HG + + G +G++I+ MY + G +D A++ F +S +DAV WNS+I+
Sbjct: 370 GKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQ 429
Query: 247 NGEIEEAYRLFERMP--------------------------GK-------------DFVS 267
NG+ EEA LF +M GK D +
Sbjct: 430 NGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFA 489
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+ +I +S GNL+ + +F+ M EK++V+W +II+ + N+ + +++ F ML +
Sbjct: 490 ESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGI 549
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ +T +++SA +++G IH Y +C + +
Sbjct: 550 QPDHVTFLAIISACGHAGQVDEG--IH---------------------YFRC--MTEELG 584
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
I ++ Y M+ F + G EA + M P+ + ++L AC G
Sbjct: 585 IMARMEH-----YACMVDLFGRAGRLNEAFGMINSMP---FSPDAGVWGTLLGACRLHGN 636
Query: 448 VEEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAG 482
VE + + + L++++P +Y + ++ AG
Sbjct: 637 VELAEV---ASRNLFDLDPQNSGYYVLLSNVHANAG 669
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L S+L + L+QG Q HA ++ + + + L+ +Y CG +DA IF +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+N MI GF G + AL + KM G +P++ TF V+ AC + V G
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 166/514 (32%), Positives = 287/514 (55%), Gaps = 41/514 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
+V ++VD Y K G + AR +FD+MP++ VV W +++ GY+ V+C + +LF+ M
Sbjct: 103 NVYICSAVVDMYAKCGEISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKML 162
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+ + ++ +++ C + G QVHGL+ + G Y++++G S++ MY + G +D
Sbjct: 163 KAAINVSAFSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVD 222
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFS 276
++ VF M R+ ++W S+++GY + +EA L + M +D V++ ++++ FS
Sbjct: 223 DSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFS 282
Query: 277 ------------------------------------SKGNLEKSIELFNMMPEKDDVTWT 300
+LE ++ +++ D++ W
Sbjct: 283 GPDCLSYCLQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWN 342
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A+I+G+ ++EEA R F EM + + + TL+SV+ A ++ L +G +HA + +
Sbjct: 343 AVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRT 402
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
S +++QN LVS+Y++CG + D+ R+F ++E +++S+N++++ FA +G G EA+ LF
Sbjct: 403 GYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELF 462
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GPEHYACMVDILG 479
+M+ + PN TFL+VL AC+HVG V++G YF +MK+ +EP EHYA +VD G
Sbjct: 463 EQMRKTEIKPNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTFG 522
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L EA INSM P P V+ ALL A H N ++A +A+ L+EL P+ YV+
Sbjct: 523 RAGYLNEAEAFINSMPIVPAPSVYKALLSASLVHGNREIAARSAKKLLELWPNDPATYVL 582
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
LS + +V G D +R + +RK PG SW
Sbjct: 583 LSSVLTVDGNWDDAADLRKLMCDRGLRKKPGYSW 616
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 211/434 (48%), Gaps = 54/434 (12%)
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
DL R G N L + C + + G+Q H + + GF ++ + ++++ MY
Sbjct: 55 DLIAEFTRHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMY 114
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------- 260
+ G + A +F M +R V+WNSLI GY+ + A LF +M
Sbjct: 115 AKCGEISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVS 174
Query: 261 --------------------------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
G + V T+++ +S G+++ S +F+ M +
Sbjct: 175 SCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNR 234
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
+ +TWT++++G+ E+ +EA EM+ +D+RPN +T +S+LS+ + L+ Q+H
Sbjct: 235 NVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVH 294
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY-RIFTNIDERNIVSYNSMISGFAQNGLG 413
++++ +ES+V I +LV++YSKC + ++ + ++ + + + +++N++I+G+++ G
Sbjct: 295 CCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRH 354
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-----FIYFKSMKTLYNIEPGP 468
EEAL F +MK G+ + T SV+ A + +EEG I+ + N++ G
Sbjct: 355 EEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNG- 413
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH-LNLDLAKLAAQ-HL 526
+V + R G++ ++ + M E W ALL A H + +L Q
Sbjct: 414 -----LVSMYARCGAIGDSKRVFWFME-EHDVISWNALLTAFAHHGYGREAVELFEQMRK 467
Query: 527 MELEPDSATPYVVL 540
E++P+S+T VL
Sbjct: 468 TEIKPNSSTFLAVL 481
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/518 (22%), Positives = 217/518 (41%), Gaps = 88/518 (16%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I A +F MP R V++ ++I G++ A EL++ M + ++ +A
Sbjct: 120 ISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKM---LKAAINVSAFSVSSC 176
Query: 83 KVGRCEEAAR---------IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
G + AR I + + +VV S+VD Y K G V ++R +FD M +NV
Sbjct: 177 LAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNV 236
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+ WT+MV GY +++ ++ L M + N +T L + +QVH
Sbjct: 237 ITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCC 296
Query: 194 VSRFGFDYDIILGNSIITMYGRL-GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ + G + ++ + +++T+Y + +++ KV S++ D ++WN++I+GY G EE
Sbjct: 297 IIQLGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEE 356
Query: 253 AYRLFERM--PGKDFVSWTT-------------------------------------MIT 273
A R F M G D S+T +++
Sbjct: 357 ALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNGLVS 416
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G + S +F M E D ++W A+++ F ++ EA F +M + +++PN T
Sbjct: 417 MYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSST 476
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+VL A + +++G + M+SD+ ++
Sbjct: 477 FLAVLCACSHVGFVDKGIEYFD-----TMKSDILLE------------------------ 507
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+ Y S++ F + G EA M +VP + ++LSA G E I
Sbjct: 508 PLKVEHYASLVDTFGRAGYLNEAEAFINSMP---IVPAPSVYKALLSASLVHGNRE---I 561
Query: 454 YFKSMKTLYNIEPG-PEHYACMVDILGRAGSLAEAIDL 490
+S K L + P P Y + +L G+ +A DL
Sbjct: 562 AARSAKKLLELWPNDPATYVLLSSVLTVDGNWDDAADL 599
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 197/639 (30%), Positives = 323/639 (50%), Gaps = 72/639 (11%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS-------GY 81
+F M +RN VS+ AMI+G+ G +++A EL+V M C L++ G
Sbjct: 218 LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGS 277
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
LK+G+ I VE D+ ++++ Y G + + ++F+ +P ++ W +M+
Sbjct: 278 LKLGKQIHQLAIKFEFVE-DLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMIS 336
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR-YREGVQVHGLVSRFGFD 200
Y C E+ DLF+ M+ G+ + T+ I+ C +G +H V + G
Sbjct: 337 AYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMR 396
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
D LGN++++MY L ++ K+F M D +SWN++I N +A LFERM
Sbjct: 397 IDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERM 456
Query: 261 PGKDFV--SWTTM-----------------ITGFSSKGNLE------------------- 282
+ S+T + I G+ K ++E
Sbjct: 457 RESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDE 516
Query: 283 -KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ +LF P++D ++W A+I PN +T+ +VLS+
Sbjct: 517 ATARDLFEGCPDRDLISWNAMIX---------------------KAEPNSVTIINVLSSF 555
Query: 342 AATATLNQGSQIHAHVVK--MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
ATL QG +HA+V + ++ D+S+ N+ +++Y++CG++ A IF + +RNI+S
Sbjct: 556 THLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIIS 615
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+N+MI+G+ NG G +A+ F +M ++G PN +TF+SVLSAC+H G +E G F SM
Sbjct: 616 WNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMV 675
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
+N+ P HY+C+VD+L R G + EA + I+SM EP VW ALL + R + + A
Sbjct: 676 QDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQA 735
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
K + L +LEP +A YV+LS++Y+ G + R+R K K +RK PG SWII+K++
Sbjct: 736 KTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQ 795
Query: 580 VHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDW 617
VH F AG +S +I L + +E + P W
Sbjct: 796 VHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDLRW 834
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/442 (31%), Positives = 214/442 (48%), Gaps = 50/442 (11%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV ++VD YCK G V +AR +FD M +++VV W AMV GY+ C+E+ L M
Sbjct: 94 DVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMG 153
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILGNSIITMYGRLGFM 219
R + NS T+ L AC R G VHG R G FD + + ++I Y R M
Sbjct: 154 RENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD-M 212
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------------- 260
+F +M R+ VSWN++ISGY G+ +A LF +M
Sbjct: 213 RVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQAC 272
Query: 261 -------PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
GK D ++ +S+ G+LE S +LF +P +D W
Sbjct: 273 AELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWN 332
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT-LNQGSQIHAHVVK 359
++IS + +EEA FI M + V+ ++ T+ +LS A+ L +G +HAHV+K
Sbjct: 333 SMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIK 392
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
M D S+ N+L+S+Y++ V +IF + +I+S+N+MI A+N L +A L
Sbjct: 393 SGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACEL 452
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDIL 478
F +M++ + PN T +S+L+AC V ++ G I+ MK ++IE + D+
Sbjct: 453 FERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMK--HSIEINQPLRTALADMY 510
Query: 479 GRAGSLAEAIDLINSMTFEPPP 500
G A A DL FE P
Sbjct: 511 MNCGDEATARDL-----FEGCP 527
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 146/597 (24%), Positives = 259/597 (43%), Gaps = 108/597 (18%)
Query: 14 TALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TA+++ C + +A +F M R+ V + AM+ G+V G + EA L M R+
Sbjct: 99 TAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMG---RE 155
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE------- 123
++ N+ L + CE A+ + G V GYC + + ++
Sbjct: 156 NLRPNSRTMVALLLA-CEGASEL----------RLGRGVHGYCLRNGMFDSNPHVATALI 204
Query: 124 -------------IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
+FD M +N+V+W AM+ GY V + +LF+ M + F+ +T
Sbjct: 205 GFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVT 264
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ + +AC + G Q+H L +F F D+ + N+++ MY G ++ ++++F +
Sbjct: 265 MLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVP 324
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMI-------TGF---- 275
RDA WNS+IS Y G EEA LF RM KD + M+ +G
Sbjct: 325 NRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGK 384
Query: 276 --------------SSKGN-----------LEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+S GN +E ++F+ M D ++W +I N
Sbjct: 385 SLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNT 444
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+A F M +++PN T+ S+L+A L+ G IH +V+K ++E + ++
Sbjct: 445 LRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRT 504
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L +Y CG+ A +F +R+++S+N+MI K E P
Sbjct: 505 ALADMYMNCGDEATARDLFEGCPDRDLISWNAMIX------------------KAE---P 543
Query: 431 NQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
N +T ++VLS+ H+ + +G ++ + +++ + + R GSL A +
Sbjct: 544 NSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAEN 603
Query: 490 LINSMTFEPPPGV--WGALL-GAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
+ ++ P + W A++ G G D A LA ++E P+ T VLS
Sbjct: 604 IFKTL---PKRNIISWNAMIAGYGMNGRGSD-AMLAFSQMLEDGFRPNGVTFVSVLS 656
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 174/371 (46%), Gaps = 42/371 (11%)
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
K+ K+ W +++ + + + M G+ N+ TL ++ +AC
Sbjct: 19 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 78
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H + D+ +G +++ Y + GF+++A VF MS RD V WN+++ GYV
Sbjct: 79 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 138
Query: 247 NGEIEEAYRLFERMPGKDF---------------------------------------VS 267
G EEA L M ++
Sbjct: 139 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 198
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T + GF + ++ LF++M ++ V+W A+ISG+ + Y +A F++ML +V
Sbjct: 199 VATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEV 258
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+ + +T+ + A A +L G QIH +K D+ I N+L+++YS G++ +++
Sbjct: 259 KFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQ 318
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F ++ R+ +NSMIS +A G EEA++LF +M+ EG+ ++ T + +LS C +
Sbjct: 319 LFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA- 377
Query: 448 VEEGFIYFKSM 458
G + KS+
Sbjct: 378 --SGLLKGKSL 386
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 293/542 (54%), Gaps = 39/542 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
++ A +V+ Y K ++ +A +FD+MPE+++V W M+ GY + + L L M
Sbjct: 64 NLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMS 123
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G +SIT+ + A R G+ VHG V R GF+ + + +++ MY + G +
Sbjct: 124 EEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVS 183
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------------------- 260
A +F M R VSWNS+I GYV +G+ E A +F++M
Sbjct: 184 IARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACA 243
Query: 261 ------PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
GK D ++I+ +S ++ + ++F + K V+W A
Sbjct: 244 DLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNA 303
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+I G+ N EA F EM ++++P+ T+ SV+ A A + Q IH V++
Sbjct: 304 MILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRF 363
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
++ +V + +LV +Y+KCG + A ++F ++ R+++++N+MI G+ +GLG+ ++ LF+
Sbjct: 364 LDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFK 423
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
+MK + PN ITFL LSAC+H GLVEEG +F+SMK Y IEP +HY MVD+LGRA
Sbjct: 424 EMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRA 483
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L +A D I M +P V+GA+LGA + H N+DL + AA + +L PD +V+L+
Sbjct: 484 GRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLA 543
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
++Y+ +VR + ++K+PGCS + + ++VH F +G S K+I L+
Sbjct: 544 NIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLE 603
Query: 602 TI 603
T+
Sbjct: 604 TL 605
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 200/437 (45%), Gaps = 44/437 (10%)
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY K + F M+ + T L + CG + G ++HG V G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
F +++ ++ MY + +++A +F M +RD V WN++ISGY NG + A L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 259 RMPGK----DFVSWTTMI---------------------TGFSSKGNLEKSI-------- 285
RM + D ++ +++ GF S N+ ++
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 286 ------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+F+ M + V+W ++I G+V + E A F +ML + V+P +T+ L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A A L +G +H V ++ ++SDVS+ NSL+S+YSKC V A IF N+ + +VS
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+N+MI G+AQNG EALN F +M+ + P+ T +SV+ A + + + + +
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQA-KWIHGLV 359
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
++ +VD+ + G++ A L + M W A++ TH L
Sbjct: 360 IRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVI-TWNAMIDGYGTH---GLG 415
Query: 520 KLAAQHLMELEPDSATP 536
K + + E++ + P
Sbjct: 416 KTSVELFKEMKKGTIKP 432
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 197/457 (43%), Gaps = 53/457 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR--DSVCSNALISG 80
I +A+ +F MP R+ V + MI+G+ + G A L + M DS+ +++
Sbjct: 81 INDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPA 140
Query: 81 -----YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
L++G + A E V ++VD Y K G V AR IFD M + VV+
Sbjct: 141 VADTRLLRIGMAVH-GYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVS 199
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W +M+DGY++ E +F M G+ ++T+ AC G VH LV
Sbjct: 200 WNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVD 259
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ D D+ + NS+I+MY + +D A +F + + VSWN++I GY NG + EA
Sbjct: 260 QLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALN 319
Query: 256 LFERMPGKDF----------------------VSW-----------------TTMITGFS 276
F M ++ W T ++ ++
Sbjct: 320 AFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYA 379
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G + + +LF+MM + +TW A+I G+ + + + F EM + ++PN +T
Sbjct: 380 KCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLC 439
Query: 337 VLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-E 394
LSA + + + +G + K +E + ++V L + G + A+ + +
Sbjct: 440 ALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIK 499
Query: 395 RNIVSYNSMISGFAQN---GLGEE-ALNLFRKMKDEG 427
I Y +M+ + LGE+ A +F+ D+G
Sbjct: 500 PGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDG 536
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 159/381 (41%), Gaps = 60/381 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM------PMRNAVS---YAAMITGFVRR 51
M RT S+N+MI + + A IF M P V +A G + R
Sbjct: 192 MDHRTVVSWNSMIDGYVQSG-DAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLER 250
Query: 52 GMFYE--AEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMV 109
G F ++L ++ D N+LIS Y K R + AA IF+ + K +V+W +M+
Sbjct: 251 GKFVHKLVDQLKLD-----SDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMI 305
Query: 110 DGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI 169
GY + G V EA F +M +N+ K D F
Sbjct: 306 LGYAQNGCVNEALNAFCEMQSRNI-----------KPDSF-------------------- 334
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T+ + A R+ +HGLV R D ++ + +++ MY + G + A K+F MM
Sbjct: 335 TMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMM 394
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSI 285
+ R ++WN++I GY +G + + LF+ M +++ ++ S G +E+ +
Sbjct: 395 NARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGL 454
Query: 286 ELFNMMPEKDDVTWT-----AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
F M + + T A++ + +A+ + +M ++P ++L A
Sbjct: 455 CFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKM---PIKPGITVYGAMLGA 511
Query: 341 SAATATLNQGSQIHAHVVKMN 361
++ G + + K+N
Sbjct: 512 CKIHKNVDLGEKAAFEIFKLN 532
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 200/627 (31%), Positives = 329/627 (52%), Gaps = 77/627 (12%)
Query: 2 ADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
A R + ++N++++ L + + +A +FA MP R+AVS+ MI G R G F++A + +
Sbjct: 277 ARRNAFTWNSLLS-LYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTF 335
Query: 62 VNM------PARWRD----------------------------SVC---SNALISGYLKV 84
++M P+++ S C +N+++ Y K
Sbjct: 336 LDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKC 395
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
G E A +FE M + V +W MV Y +GR+ A +F+ M E+++V+W ++ GY
Sbjct: 396 GDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYN 455
Query: 145 KVDCFEDGFDL-FLS--MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
+ DG L F S + M ++ T+T + AC + G Q+H + R G
Sbjct: 456 QNGL--DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTG--- 510
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
M ++++ N+LIS Y +G +E A R+ ++
Sbjct: 511 -----------------MPCSSQIM-----------NALISTYAKSGSVETARRIMDQAV 542
Query: 262 GKDF--VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
D +S+T ++ G+ G+ +++ E+F++M +D + WTA+I G+ N Q +EA F
Sbjct: 543 VADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELF 602
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
M+ PN TL++VLSA A+ A L+ G QIH ++ E VS+ N+++++Y++
Sbjct: 603 RSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARS 662
Query: 380 GNVVDAYRIFTNIDERN-IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
G+V A R+F I R +++ SMI AQ+GLGE+A+ LF +M G+ P+ IT++ V
Sbjct: 663 GSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGV 722
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSAC H G V++G Y++ M+ + I P HYACMVD+ RAG L EA + I M P
Sbjct: 723 LSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAP 782
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
VWG+LL A R N DLA+LAA L+ ++P ++ Y L+++YS G+ D R+
Sbjct: 783 DTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWK 842
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLA 585
+K K ++K G SW ++ KVH+F A
Sbjct: 843 LRKDKGVKKETGFSWTHVRGKVHVFGA 869
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 147/550 (26%), Positives = 241/550 (43%), Gaps = 103/550 (18%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCE 88
+ +T N ++Y A + V RG F EA L+ ++P R++ N+L+S Y K GR
Sbjct: 241 LVSTYLCNNLLAYYASVG--VSRGCFREARCLFDDIPYARRNAFTWNSLLSLYAKSGRLP 298
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
+A +F M ++D V+W M+ G + GR
Sbjct: 299 DAHVVFAEMPDRDAVSWTIMIVGLNRSGR------------------------------- 327
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
F D FL M G A + TLT + +C G +VH V + G + + NS
Sbjct: 328 FWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANS 387
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSW 268
++ MYG+ G + A VF M R SWN ++S Y H G +E A +FE M + VSW
Sbjct: 388 VLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSW 447
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDV 327
T+I G++ G + G A ++F ML +
Sbjct: 448 NTIIAGYNQNG-----------------------LDGM--------ALKFFSRMLSASSM 476
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ T++SVLSA A L G Q+H+++++ M I N+L+S Y+K G+V A R
Sbjct: 477 EPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARR 536
Query: 388 ---------------------------------IFTNIDERNIVSYNSMISGFAQNGLGE 414
IF ++ R+++++ +MI G+ QNG +
Sbjct: 537 IMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQND 596
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYAC 473
EA+ LFR M G PN T +VLSAC + ++ G I+ K++++L E
Sbjct: 597 EAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQ--EQSVSVSNA 654
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEP 531
++ + R+GS+ A + + + + W +++ A H + A + + ++ ++P
Sbjct: 655 IITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKP 714
Query: 532 DSATPYVVLS 541
D T VLS
Sbjct: 715 DHITYVGVLS 724
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 37/132 (28%)
Query: 348 NQGSQIHAHVVKMNM-------------ESDVSIQ------------------------N 370
+ G IHAH VK + + V + N
Sbjct: 226 SAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWN 285
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SL+SLY+K G + DA+ +F + +R+ VS+ MI G ++G +A+ F M EG P
Sbjct: 286 SLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAP 345
Query: 431 NQITFLSVLSAC 442
+Q T +VLS+C
Sbjct: 346 SQFTLTNVLSSC 357
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 285/526 (54%), Gaps = 33/526 (6%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A++ +A + ++ ++ + ++ A +F+++ + +V+ + ++ +++
Sbjct: 38 AQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPL 97
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
F +F M+ G+ ++ T L +AC R +H V + GF DI + NS+I
Sbjct: 98 LAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLI 157
Query: 211 TMYGRLGF---------------------------------MDEANKVFSMMSKRDAVSW 237
Y + G + EA ++F M +RD VSW
Sbjct: 158 DSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSW 217
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N+++ GYV GE+ A+ LFE+MP ++ VSW+TM+ G+S G+++ + LF+ MP K+ V
Sbjct: 218 NTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLV 277
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
WT +ISG+ ++A + +M ++ + T+ S+LSA A + L G ++HA +
Sbjct: 278 PWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASI 337
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+ + + N+L+ +Y+KCG++ +A IF + +++VS+N++I G A +G GE+AL
Sbjct: 338 ERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKAL 397
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
LF +MK EG VP+++TF+ VL AC H G V+EG YF +M+ Y + P EHY CMVD+
Sbjct: 398 QLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDL 457
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGR G L EA L++SM EP +WG LLGA R H LA+ L++ E +
Sbjct: 458 LGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNL 517
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+LS++Y+ G + +R++ K I+K G S I + D+VH F
Sbjct: 518 SMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEF 563
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 187/370 (50%), Gaps = 19/370 (5%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+ A ++F M R+ VS+ +MI G V+ G EA L+ MP R D+V N ++ GY+
Sbjct: 168 VAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPER--DTVSWNTILDGYV 225
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
K G A +FE M ++VV+W +MV GY K G + AR +FDKMP KN+V WT M+ G
Sbjct: 226 KAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISG 285
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
Y + +D +L+ M G+ F+ T+ + AC G +VH + R F
Sbjct: 286 YAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCS 345
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ N++I MY + G ++ A +F M ++D VSWN++I G +G E+A +LF RM G
Sbjct: 346 TPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKG 405
Query: 263 KDF----VSWTTMITGFSSKGNLEKSIELFNMM-------PEKDDVTWTAIISGFVNNEQ 311
+ F V++ ++ + G +++ + F+ M PE + + ++ +
Sbjct: 406 EGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEH--YGCMVDLLGRGGR 463
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
+EAFR M + PN + ++L A + ++ +VK + SD +
Sbjct: 464 LKEAFRLVHSM---PLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSEL-SDSGNLSM 519
Query: 372 LVSLYSKCGN 381
L ++Y+ G+
Sbjct: 520 LSNIYAAAGD 529
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 155/348 (44%), Gaps = 50/348 (14%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H V + + +G +I + M A VF+ + D + +N+LI +V N
Sbjct: 35 QIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNS 94
Query: 249 EIEEAYRLFERM-------------------PGKDFVSWTTMI------TGFSSKGNLEK 283
E A+ +F M GK +V MI GF +
Sbjct: 95 EPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPN 154
Query: 284 SI----------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
S+ ++F +M E+D V+W ++I G V + EA R F EM +D
Sbjct: 155 SLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDT 214
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
++ +++L +N ++ + N+ S +++V YSK G++ A
Sbjct: 215 ----VSWNTILDGYVKAGEMNAAFELFEKMPARNVVS----WSTMVLGYSKAGDMDMARI 266
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + +N+V + MISG+A+ GL ++A+NL+ +M++ GL + T +S+LSAC GL
Sbjct: 267 LFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGL 326
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+ G S++ P A ++D+ + GSL A+ + + M
Sbjct: 327 LGLGKRVHASIERTRFKCSTPVSNA-LIDMYAKCGSLENALSIFHGMV 373
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%)
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
++LNQ QIHA V+K N+ + + L++ +S C + A +F I + +++ YN++I
Sbjct: 28 SSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLI 87
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+N A ++F +M+D G+ + T+ +L AC+
Sbjct: 88 RAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACS 126
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 276/507 (54%), Gaps = 48/507 (9%)
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ NV +W +++ + + F S+R+ G+ + ++C G
Sbjct: 1104 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRM 1163
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
H FGF+ D+ + +++I MY + G + +A +F + R+ VSW S+I+GYV N +
Sbjct: 1164 SHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQ 1223
Query: 250 IEEAYRLFE------------------------------RMPGKDFVSWT---------- 269
+ A LF+ R+ GK
Sbjct: 1224 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 1283
Query: 270 -------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
T++ ++ G S ++F+ M EKDD++W ++I+ + + EA F M
Sbjct: 1284 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 1343
Query: 323 LRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
+R VR N +TLS+VL A A L G IH V+KM++E +V + S++ +Y KCG
Sbjct: 1344 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 1403
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
V A + F + E+N+ S+ +M++G+ +G +EAL++F KM G+ PN ITF+SVL+A
Sbjct: 1404 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 1463
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C+H GLVEEG+ +F +MK Y+IEPG EHY CMVD+ GRAG L EA +LI M +P
Sbjct: 1464 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 1523
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VWG+LLGA R H N+DL ++AAQ L EL+PD+ YV+LS+LY+ G+ D R+RM K
Sbjct: 1524 VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 1583
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRK 588
+++ K PG S + LK +VH+FL G K
Sbjct: 1584 NRQLVKPPGFSLVELKGRVHVFLVGDK 1610
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 206/397 (51%), Gaps = 31/397 (7%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A+I + + D + ++ Y GR+ A +F ++ W ++ E
Sbjct: 48 AKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSE 107
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
L+ +M G+A + T + +AC F G VHG + ++GF D+ + N++I
Sbjct: 108 QALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLI 167
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTT 270
Y + G A ++FE+M ++ VSWTT
Sbjct: 168 DFYFKCG-------------------------------HTRFALKVFEKMRVRNVVSWTT 196
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I+G S G+L+++ +F+ +P K+ V+WTA+I+G++ N+Q EEA F M +++ PN
Sbjct: 197 VISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPN 256
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ T+ S++ A L G IH + +K +E V + +L+ +YSKCG++ DA +F
Sbjct: 257 EYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFE 316
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ +++ ++NSMI+ +GLG+EALNLF +M+ + P+ ITF+ VL AC H+ V+E
Sbjct: 317 TMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKE 376
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
G YF M Y I P PEHY CM ++ R+ +L EA
Sbjct: 377 GCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 213/482 (44%), Gaps = 91/482 (18%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
E D+ +++D Y K G++ +AR +FD++P +NVV+WT+M+ GY++ + ++ LF
Sbjct: 1174 ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKD 1233
Query: 159 MRR--------GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ +S+ + + AC R VHG V + GFD I +GN+++
Sbjct: 1234 FLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLM 1293
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM---------- 260
Y + G + KVF M ++D +SWNS+I+ Y +G EA +F M
Sbjct: 1294 DAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNA 1353
Query: 261 -----------------PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNM 290
GK + T++I + G +E + + F+
Sbjct: 1354 VTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDR 1413
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M EK+ +WTA+++G+ + + +EA F +M+R V+PN +T SVL+A + + +G
Sbjct: 1414 MKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG 1473
Query: 351 SQ-IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
+A K ++E + +V L+ + G + +AY
Sbjct: 1474 WHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAY----------------------- 1510
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GP 468
NL ++MK + P+ + + S+L AC V+ G I + + L+ ++P
Sbjct: 1511 --------NLIKRMK---MKPDFVVWGSLLGACRIHKNVDLGEI---AAQKLFELDPDNC 1556
Query: 469 EHYACMVDILGRAGSLAEAID---LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
+Y + ++ AG A+ L+ + PPG + + GR H+ L K H
Sbjct: 1557 GYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPG-FSLVELKGRVHVFLVGDKEHPHH 1615
Query: 526 LM 527
M
Sbjct: 1616 EM 1617
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 27/255 (10%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N LI Y K G A ++FE M ++VV+W +++ G G + EAR IFD++P
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
KNVV+WTAM++GY++ E+ +LF M+ + N T+ L +AC G
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + + + LG ++I MY + G + +A +VF M ++ +WNS+I+ +G
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+EA LF M E N+ P D +T+ ++ V+
Sbjct: 339 GQEALNLFSEM-------------------------ERVNVKP--DAITFIGVLCACVHI 371
Query: 310 EQYEEAFRWFIEMLR 324
+ +E +F M +
Sbjct: 372 KNVKEGCAYFTRMTQ 386
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 191/401 (47%), Gaps = 34/401 (8%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGM----------FYEAE---ELYVNMPARWRDS 71
+A +F +P+RN VS+ +MITG+V+ F E E E N+P DS
Sbjct: 1195 DARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPL---DS 1251
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDK 127
V +++S +V + +V+K + +++D Y K G+ + ++++FD
Sbjct: 1252 VVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDW 1311
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYRE 186
M EK+ ++W +M+ Y + + ++F M R G+ +N++TL+ + AC R
Sbjct: 1312 MEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRA 1371
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H V + +Y++ +G SII MY + G ++ A K F M +++ SW ++++GY
Sbjct: 1372 GKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGM 1431
Query: 247 NGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT---- 298
+G +EA +F +M +++++ +++ S G +E+ FN M K D+
Sbjct: 1432 HGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIE 1491
Query: 299 -WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+ ++ F EA+ + R ++P+ + S+L A ++ G +
Sbjct: 1492 HYGCMVDLFGRAGCLNEAYNL---IKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKL 1548
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+++ + + L +LY+ G D R+ + R +V
Sbjct: 1549 FELDPD-NCGYYVLLSNLYADAGRWADVERMRMLMKNRQLV 1588
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 145/303 (47%), Gaps = 45/303 (14%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I +S+ G + +I LF + TW II N E+A + M+ + + +
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG---------- 380
+ T V+ A +++ G +H ++K DV +QN+L+ Y KCG
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 381 -----NVV----------------DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
NVV +A RIF I +N+VS+ +MI+G+ +N EEAL L
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDIL 478
F++M+ E + PN+ T +S++ AC +G++ G I+ ++K IE G ++D+
Sbjct: 245 FKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNC--IEIGVYLGTALIDMY 302
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALL------GAGRTHLNLDLAKLAAQHLMELEPD 532
+ GS+ +AI++ +M + P W +++ G G+ LNL + + ++PD
Sbjct: 303 SKCGSIKDAIEVFETMPRKSLP-TWNSMITSLGVHGLGQEALNL----FSEMERVNVKPD 357
Query: 533 SAT 535
+ T
Sbjct: 358 AIT 360
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 10/232 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+ +I+ LI+ + EA IF +P +N VS+ AMI G++R EA EL
Sbjct: 186 MRVRNVVSWTTVISGLISCG-DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 61 YVNMPAR--WRDSVCSNALIS-----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+ M A + + +LI G L +GR I + +E V +++D Y
Sbjct: 245 FKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI-KNCIEIGVYLGTALIDMYS 303
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G + +A E+F+ MP K++ W +M+ ++ +LF M R + ++IT
Sbjct: 304 KCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIG 363
Query: 174 LFEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
+ AC +EG + +G + +Y R +DEA K
Sbjct: 364 VLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
QIHA +++ + +D + L+ LYS G + A +F I ++N +I NG
Sbjct: 45 QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
L E+AL L++ M +G+ ++ TF V+ AC + ++ G + S+
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+D+ N+ S+NS+I+ A+ G EAL F ++ GL+P + +F + +C+ + + G
Sbjct: 1102 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 1161
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
+ + ++ E + ++D+ + G L +A L + +
Sbjct: 1162 RMSHQQ-AFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPL 1205
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 194/651 (29%), Positives = 330/651 (50%), Gaps = 79/651 (12%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA 96
+AV +++T + + A ++ MP RD V A+ S + G EA R+F
Sbjct: 83 DAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGE 142
Query: 97 MVEKDVVA----------------------------------WGS-------MVDGYCKK 115
+E+ ++ WG+ ++D + K
Sbjct: 143 TLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKN 202
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G ++ R +FD + E+ VV WT ++ Y + ++ +LFL M G + TL+ +
Sbjct: 203 GDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSML 262
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG---FMDEANKVFSMMSKR 232
AC +R G Q+H L R G + D + ++ MY + + A +VF+ M K
Sbjct: 263 SACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKH 322
Query: 233 DAVSWNSLISGYVHNGEIE-EAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIEL 287
+ ++W +L+SGYV G + + LF +M + + +++++M+ ++ G+ + ++
Sbjct: 323 NVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQI 382
Query: 288 FNMMPEKD----DVTWTAIISGFVNNEQYEEAFRWFIEMLRK-----------DVRPN-- 330
+ + +V A++S + + EEA F ++ K D R N
Sbjct: 383 HTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTY 442
Query: 331 -------------QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
T S++SA+A+ L +G ++HA +K SD +I NSLVS+YS
Sbjct: 443 QDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYS 502
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
+CG +VDA ++F +++ N++S+ SMISG A++G AL LF M G+ PN +T+++
Sbjct: 503 RCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIA 562
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
VLSAC+H GLV+EG +F+ M+ + + P EHYACMVD+LGR+G + +A+D IN M +
Sbjct: 563 VLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQ 622
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
VW LLGA +TH N+D+ ++AA H+++LEP PYV+LS+LY+ G R+R
Sbjct: 623 VDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIR 682
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+ K + K G SW+ + + +H F AG S +EI L+T+ + K
Sbjct: 683 SLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIK 733
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 209/450 (46%), Gaps = 61/450 (13%)
Query: 96 AMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE--KNVVAWTAMVDGYMKVDCFEDGF 153
+++E D V S++ Y K V AR +FD MP +++V+WTAM + +
Sbjct: 78 SLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEAL 137
Query: 154 DLFLSMRRGGMAFNSITLTILFEAC--GRFFRYREGVQVHGLVSRFGF-DYDIILGNSII 210
LF G+ N+ TL +AC F G V GLV + GF D+ +G ++I
Sbjct: 138 RLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGA-VLGLVFKLGFWGTDVSVGCALI 196
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----V 266
M+ + G + +VF + +R V W LI+ Y +G +EA LF M F
Sbjct: 197 DMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQY 256
Query: 267 SWTTMITGFSSKG--------------------------------------NLEKSIELF 288
+ ++M++ + G +L + E+F
Sbjct: 257 TLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVF 316
Query: 289 NMMPEKDDVTWTAIISGFVN-NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
N MP+ + + WTA++SG+V Q + F +ML + +RPN +T SS+L A A
Sbjct: 317 NRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQ 376
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
+ G QIH H VK N+ + N+LVS+Y++ G++ +A F + E+N+VS++ + G
Sbjct: 377 DSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGD 436
Query: 408 AQNGLGEEALNLFRKMKDE--GLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNI 464
++ N ++ + E L + TF S++SA VG++ +G ++ S+K +
Sbjct: 437 GRS-------NTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGS 489
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ + +V + R G L +A + + M
Sbjct: 490 DRAIGNS--LVSMYSRCGYLVDACQVFDEM 517
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 175/376 (46%), Gaps = 52/376 (13%)
Query: 187 GVQVHGLVSRFG--FDYDIILGNSIITMYGRLGFMDEANKVFSMM--SKRDAVSWNSLIS 242
G + G + R G + D ++ NS++T+Y + + A VF M RD VSW ++ S
Sbjct: 66 GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125
Query: 243 GYVHNGEIEEAYRLFER------MP----------------------------------- 261
NG EA RLF +P
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFW 185
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G D +I F+ G+L +F+ + E+ V WT +I+ + + +EA F++
Sbjct: 186 GTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLD 245
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
ML +P+Q TLSS+LSA + G Q+H+ +++ +ESD + LV +Y+K N
Sbjct: 246 MLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHN 305
Query: 382 ---VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE-EALNLFRKMKDEGLVPNQITFLS 437
+ +A +F + + N++++ +++SG+ Q G + + + LF KM +EG+ PN IT+ S
Sbjct: 306 GQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSS 365
Query: 438 VLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
+L AC ++G + G I+ +K+ N+ +V + +GS+ EA + +
Sbjct: 366 MLKACANLGDQDSGRQIHTHCVKS--NLADLNVVGNALVSMYAESGSIEEARHAFDQLYE 423
Query: 497 EPPPGVWGALLGAGRT 512
+ G L G GR+
Sbjct: 424 KNMVSFSGNLDGDGRS 439
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 347 LNQGSQIHAHVVKMN--MESDVSIQNSLVSLYSKCGNVVDAYRIFTN--IDERNIVSYNS 402
++ G + H+++ +E+D + NSL++LYSKC V A +F + R++VS+ +
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
M S ++NG EAL LF + +EGL+PN T + AC
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQAC 162
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 294/592 (49%), Gaps = 72/592 (12%)
Query: 91 ARIFEAMVEKDVVAWGSMVD--GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
A I + + + A +++ + G + A +F+ + E N+ W +M+ G
Sbjct: 50 AHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLS 109
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
F+ M G+ NS T L ++C + EG Q+H V + GF D+ + S
Sbjct: 110 PALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTS 169
Query: 209 IITMYGR-------------------------------LGFMDEANKVFSMMSKRDAVSW 237
+I MY + G+MD A ++F M +D VSW
Sbjct: 170 LINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSW 229
Query: 238 NSLISGYVHNGEIEEAYRLFERMP--------------------------GKDFVSW--- 268
N++I+GY G +EA LFE M G SW
Sbjct: 230 NAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIED 289
Query: 269 ----------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+I +S G+L+ + ELF+ M E+D ++W +I G+ + Y+EA
Sbjct: 290 RGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALAL 349
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F EML V P ++T S+L + A ++ G IHA++ K S+ SL+ LY+K
Sbjct: 350 FREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAK 409
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CGN+V A ++F + +++ S+N+MI G A +G ++A LF KM +G+ PN+ITF+ +
Sbjct: 410 CGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGI 469
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSAC H GLV+ G +F SM Y I P +HY CM+D+LGRAG EA L+ +M +P
Sbjct: 470 LSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKP 529
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
+WG+LLGA R H ++L +L A+ L ELEPD+ YV+LS++Y+ GK D R+R
Sbjct: 530 DGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRT 589
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEF 610
+ + ++K PGC+ I + + VH FL G K ++I L+ + + K F
Sbjct: 590 RLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVF 641
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 197/453 (43%), Gaps = 76/453 (16%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D +LI+ Y + G A +F+ +D +++ +++ GY G + AR++FD+MP
Sbjct: 163 DVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMP 222
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
K+VV+W AM+ GY ++ ++ LF MR+ + N T+ + AC + G
Sbjct: 223 VKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNS 282
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+ + G ++ L N++I MY + G + A ++F M +RD +SWN +I GY H
Sbjct: 283 MRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCS 342
Query: 250 IEEAYRLFERMPGK----------------------DFVSW-----------------TT 270
+EA LF M D W T+
Sbjct: 343 YKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTS 402
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I ++ GN+ + ++F+ M K +W A+I G + Q ++AF F +M + PN
Sbjct: 403 LIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPN 462
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
++T +LSA ++ G Q + +V Q+ +S S+
Sbjct: 463 EITFVGILSACKHAGLVDLGQQFFSSMV----------QDYKISPKSQ------------ 500
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
Y MI + GL EEA +L + M+ + P+ + S+L AC G VE
Sbjct: 501 --------HYGCMIDLLGRAGLFEEAESLLQNME---VKPDGAIWGSLLGACRDHGRVEL 549
Query: 451 GFIYFKSMKTLYNIEP-GPEHYACMVDILGRAG 482
G + + L+ +EP P Y + +I AG
Sbjct: 550 GELV---AERLFELEPDNPGAYVLLSNIYAGAG 579
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 190/436 (43%), Gaps = 59/436 (13%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
T+LIN + + A +F R+A+S+ A+I G+ G A +L+ MP + D
Sbjct: 168 TSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVK--D 225
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVV--------------------------A 104
V NA+I+GY ++GR +EA +FE M + +V +
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRS 285
Query: 105 W-------------GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
W +++D Y K G + ARE+FD M E++V++W M+ GY + +++
Sbjct: 286 WIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKE 345
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
LF M G+ IT + +C G +H +++ L S+I
Sbjct: 346 ALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLID 405
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VS 267
+Y + G + A +VF M + SWN++I G +G+ ++A+ LF +M ++
Sbjct: 406 LYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEIT 465
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEM 322
+ +++ G ++ + F+ M + ++ + +I +EEA M
Sbjct: 466 FVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNM 525
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGN 381
+V+P+ S+L A + G + + + +E D L+S +Y+ G
Sbjct: 526 ---EVKPDGAIWGSLLGACRDHGRVELGELVAERLFE--LEPDNPGAYVLLSNIYAGAGK 580
Query: 382 VVDAYRIFTNIDERNI 397
D RI T +++R +
Sbjct: 581 WDDVARIRTRLNDRGM 596
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 352 QIHAHVVKMNMESDVSIQNSLV--SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
QIHAH++K + + + + L+ S S+ G++ A +F +I+E N+ +NSMI G +
Sbjct: 47 QIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSM 106
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ AL F +M G+ PN TF +L +C + EG
Sbjct: 107 SLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEG 148
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 270/493 (54%), Gaps = 49/493 (9%)
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L L + C + G HG V R G + D + N ++ MY + G + A KVF +
Sbjct: 1 LHSLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIP 60
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERM-----PGKDFVS------------------ 267
+R VSWN +I V NGE E+A +F M P +F
Sbjct: 61 ERSMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQ 120
Query: 268 ----------------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
T +I ++ G++E + +F MPE++DVTW++I++GFV NE
Sbjct: 121 LHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNEL 180
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
YEE F + NQ +SSV+ A A A L +G Q+HA V + + + ++
Sbjct: 181 YEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASA 240
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
LV +Y+KCG++ +AY +F NI+++N+V +N++ISGFA++ E +NLF +M+ G+ P+
Sbjct: 241 LVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPD 300
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
++T+++VLSAC HVGLV++G YF M +N+ P HY+CMVDILGR G + EA +L+
Sbjct: 301 EVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELM 360
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
M F +WG+LL + R H NL+LA++AA++L E+EPD YV+L++ Y+ K
Sbjct: 361 TKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAASKKWE 420
Query: 552 DGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL--------QTI 603
+ + R K I K G SWI +KDKVH F+AG ++ + +I + L + +
Sbjct: 421 EAAKARKSLKGSEILKERGKSWIEIKDKVHTFMAGERTHPRITDIYLELNNLLEEMTKLV 480
Query: 604 SKGTKEFDWPKHD 616
+K +FD HD
Sbjct: 481 NKAETDFDL--HD 491
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 179/374 (47%), Gaps = 51/374 (13%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I A ++F +P R+ VS+ MI V+ G +A ++++ M + S CS +S
Sbjct: 49 IRRACKVFDEIPERSMVSWNIMIGTCVQNGEEEKAIDIFLEM--QREGSPCSEFTVSSV- 105
Query: 83 KVGRCEEAARIF----------EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
V C +F +A+V+ DV +++D Y K G + +A +F+ MPE+N
Sbjct: 106 -VCACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERN 164
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
V W+++V G+++ + +E+G LF + G+ N ++ + AC EG QVH
Sbjct: 165 DVTWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHA 224
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+V R GF + + ++++ MY + G ++EA +F + K++ V WN++ISG+ + E
Sbjct: 225 IVCRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSE 284
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
LFE M TG M P D+VT+ A++S V+
Sbjct: 285 VMNLFEEMQQ----------TG---------------MQP--DEVTYVAVLSACVHVGLV 317
Query: 313 EEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIH-AH--VVKMNMESDVSI 368
++ +F M R+ +V PN VL S L +G +H AH + KM + S+
Sbjct: 318 DKGRSYFDLMTREHNVSPN------VLHYSCMVDILGRGGLVHEAHELMTKMPFAATASM 371
Query: 369 QNSLVSLYSKCGNV 382
SL++ GN+
Sbjct: 372 WGSLLASCRIHGNL 385
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 187/412 (45%), Gaps = 83/412 (20%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
+E D + +++ Y K G + A ++FD++PE+++V+W M+ ++ E D+FL
Sbjct: 29 LETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQNGEEEKAIDIFL 88
Query: 158 SMRRGGMAFNSITLTILFEAC---GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
M+R G + T++ + AC G F R Q+H + D D+ +G ++I +Y
Sbjct: 89 EMQREGSPCSEFTVSSVVCACAAKGDVFFCR---QLHAFAIKAVVDADVFVGTALIDVYA 145
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER--------------- 259
+ G +++A+ VF M +R+ V+W+S+++G+V N EE LF R
Sbjct: 146 KCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMISS 205
Query: 260 -----------MPGK--------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+ G+ +FV+ + ++ ++ G++E++ LF + +K
Sbjct: 206 VIRACAGLAALIEGRQVHAIVCRTGFGPNNFVA-SALVDMYAKCGSIEEAYVLFCNIEKK 264
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
+ V W AIISGF + E F EM + ++P+++T +VLSA +++G
Sbjct: 265 NVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKG---R 321
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
++ M E +VS N++ Y+ M+ + GL
Sbjct: 322 SYFDLMTREHNVS---------------------------PNVLHYSCMVDILGRGGLVH 354
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
EA L KM + S+L++C G +E I + K L+ +EP
Sbjct: 355 EAHELMTKMP---FAATASMWGSLLASCRIHGNLELAEI---AAKNLFEMEP 400
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALIS 79
SI EA+ +F + +N V + A+I+GF + E L+ M D V A++S
Sbjct: 250 SIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLS 309
Query: 80 GYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+ VG ++ F+ M V +V+ + MVD + G V EA E+ KMP
Sbjct: 310 ACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMP----F 365
Query: 135 AWTAMVDGYMKVDC 148
A TA + G + C
Sbjct: 366 AATASMWGSLLASC 379
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 170/540 (31%), Positives = 305/540 (56%), Gaps = 32/540 (5%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN +I Y+++G +A R F+ + KD VAW +++ G K G + +A + P +NV
Sbjct: 143 SNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNV 202
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++WT ++ GY + + D F SM G+ + +T+ L AC +
Sbjct: 203 ISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQL------------ 250
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
D++ G S+ + G G + MS + V+ LI Y G+I A
Sbjct: 251 -------KDLVFGRSLHKLVGEKGML---------MSGKLVVA---LIDMYAKCGDIGRA 291
Query: 254 YRLFERM-PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
+ +F+ + G+ SW MI G+ G+++ + LF+ M ++D VT+ ++I+G+++ +
Sbjct: 292 WEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRL 351
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA F++M R D+R + T+ S+L+A A+ L QG +HA + + +E D+ + +L
Sbjct: 352 REALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTAL 411
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ +Y KCG V +A +F + R++ ++++MI+G A NG+G+ AL F MK +G PN
Sbjct: 412 LDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNS 471
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
+T++++L+AC+H L++EG +YF+ M+ L+NI P EHY CM+D+LGR+G L EA+DL+
Sbjct: 472 VTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVR 531
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
+M +P +W ++L A R H + +LA+ AA+HL++LEPD YV L ++Y + D
Sbjct: 532 TMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWED 591
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+++R + + ++K+ G S I + +VH F+ ++ + EI ++ I++ K +
Sbjct: 592 ASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGY 651
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 163/362 (45%), Gaps = 65/362 (17%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD+MP + TA+ + E L+ MRR G+ ++ T LF+ C R
Sbjct: 59 LFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRA 118
Query: 184 YREGVQ-VHGLVSRFGFDYDI-ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+ Q +H R + ++ N II MY LG +A + F + +DAV+W ++I
Sbjct: 119 HVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVI 178
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
SG G +++A+ L P ++ +SWT +I+G+S G ++++ FN
Sbjct: 179 SGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFN------------ 226
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
ML + P+++T+ +LSA A L G +H V +
Sbjct: 227 -------------------SMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKG 267
Query: 362 MESDVSIQNSLVSLYSKCGNV-------------------------------VDAYR-IF 389
M + +L+ +Y+KCG++ VD R +F
Sbjct: 268 MLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLF 327
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+++R++V++NS+I+G+ G EAL LF +M+ L + T +S+L+AC +G +
Sbjct: 328 DQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALP 387
Query: 450 EG 451
+G
Sbjct: 388 QG 389
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 193/454 (42%), Gaps = 88/454 (19%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+A F +P+++AV++ +I+G + G+ +A L + PA R+ + LISGY +
Sbjct: 158 DARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPA--RNVISWTGLISGYSRA 215
Query: 85 GRCEEAARIFEAMV-----------------------------------EKDVVAWG--- 106
GR EA F +M+ EK ++ G
Sbjct: 216 GRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLV 275
Query: 107 -SMVDGYCKKGRVIEAREIFDKMPE-KNVVAWTAMVDGYMKV----------DCFED--- 151
+++D Y K G + A E+FD + + +W AM+DGY K+ D ED
Sbjct: 276 VALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDL 335
Query: 152 ------------------GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
LF+ MRR + ++ T+ L AC +G +H
Sbjct: 336 VTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHAC 395
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ + + DI LG +++ MY + G ++EA+ VF MS RD +W+++I+G NG + A
Sbjct: 396 IEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAA 455
Query: 254 YRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIIS 304
F M F V++ ++T S L++ F M ++ + +I
Sbjct: 456 LEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMID 515
Query: 305 GFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
+ +EA ++++R ++PN + +S+LSA N H++K+ +
Sbjct: 516 LLGRSGLLDEA----MDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPD 571
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
D ++ L ++Y DA +I ++ER +
Sbjct: 572 ED-AVYVQLYNIYIDSRQWEDASQIRRLMEERGV 604
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 126/314 (40%), Gaps = 61/314 (19%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNA----VSYAAMITGFVRRGMFYE 56
M DR ++N++IT I+ + EA +F M + + +++T G +
Sbjct: 330 MEDRDLVTFNSLITGYIHGG-RLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQ 388
Query: 57 AEELYVNMPARWR--DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
L+ + R D AL+ YLK GR EEA+ +F+AM +DV W +M+ G
Sbjct: 389 GRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAF 448
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G A E F +MKVD F+ NS+T +
Sbjct: 449 NGMGKAALEYF----------------FWMKVDGFQP---------------NSVTYIAI 477
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGN---------SIITMYGRLGFMDEA-NK 224
AC EG R F+ +L N +I + GR G +DEA +
Sbjct: 478 LTACSHSCLLDEG--------RLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDL 529
Query: 225 VFSMMSKRDAVSWNSLISGY-VH---NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
V +M + +AV W S++S VH N A L + P +D V + + +
Sbjct: 530 VRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAV-YVQLYNIYIDSRQ 588
Query: 281 LEKSIELFNMMPEK 294
E + ++ +M E+
Sbjct: 589 WEDASQIRRLMEER 602
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 301/550 (54%), Gaps = 39/550 (7%)
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
+++ ++ D ++VD Y K + +AR +FDKM E+++V WT M+ GY + +
Sbjct: 56 VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 115
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
LF MR G+ + + + + AC + + + + R F D+ILG ++I M
Sbjct: 116 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDM 175
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSW 268
Y + G ++ A ++F M +++ +SW+++I+ Y ++G+ +A LF M D ++
Sbjct: 176 YAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITL 235
Query: 269 TTMITGFSSKGNLE-------------------------------KSIE----LFNMMPE 293
+++ S NL+ + IE LF+ MPE
Sbjct: 236 ASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPE 295
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+D VTWT +I G+ E+ F +M + V P+++ + +V+ A A +++ I
Sbjct: 296 RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI 355
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
++ + + DV + +++ +++KCG V A IF ++E+N++S+++MI+ + +G G
Sbjct: 356 DDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQG 415
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
+AL+LF M G++PN+IT +S+L AC+H GLVEEG +F M Y++ +HY C
Sbjct: 416 RKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTC 475
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDS 533
+VD+LGRAG L EA+ LI SMT E G+WGA LGA RTH ++ LA+ AA L+EL+P +
Sbjct: 476 VVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQN 535
Query: 534 ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDL 593
Y++LS++Y+ G+ D + R +R++K PG +WI + +K H F G +
Sbjct: 536 PGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRS 595
Query: 594 KEIEVTLQTI 603
KEI L+++
Sbjct: 596 KEIYEMLKSL 605
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 207/426 (48%), Gaps = 53/426 (12%)
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
MV G+ KV + + F F + R G ++ TL + AC + G +H +V +FG
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
D D + +++ MY + +++A +F M +RD V+W +I GY G+ E+ LFE
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 259 RM------PGK---------------------------------DFVSWTTMITGFSSKG 279
+M P K D + T MI ++ G
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+E + E+F+ M EK+ ++W+A+I+ + + Q +A F ML + P+++TL+S+L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A + L G IH V K ++ D + +LV +Y KC + DA +F + ER++V+
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI---YFK 456
+ MI G+A+ G E+L LF KM++EG+VP+++ ++V+ AC +G + + Y +
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 360
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL------GAG 510
K ++ G M+D+ + G + A ++ + M E W A++ G G
Sbjct: 361 RKKFQLDVILG----TAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQG 415
Query: 511 RTHLNL 516
R L+L
Sbjct: 416 RKALDL 421
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 142/545 (26%), Positives = 225/545 (41%), Gaps = 126/545 (23%)
Query: 42 AAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK- 100
AA++ +V+ +A L+ M R D V +I GY + G+ E+ +FE M E+
Sbjct: 69 AALVDMYVKCREIEDARFLFDKMQER--DLVTWTVMIGGYAECGKANESLVLFEKMREEG 126
Query: 101 --------------------------------------DVVAWGSMVDGYCKKGRVIEAR 122
DV+ +M+D Y K G V AR
Sbjct: 127 VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAR 186
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
EIFD+M EKNV++W+AM+ Y DLF M GM + ITL L AC
Sbjct: 187 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLK 246
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+ G +H +V +FG D D + +++ MYG+ +++A +F M +RD V+W +I
Sbjct: 247 NLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIG 306
Query: 243 GYVHNGEIEEAYRLFERM------PGK--------------------------------- 263
GY G E+ LF++M P K
Sbjct: 307 GYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL 366
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
D + T MI + G +E + E+F+ M EK+ ++W+A+I+ + + Q +A F ML
Sbjct: 367 DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 426
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
R + PN++TL S+L A + + +G + + M D S++
Sbjct: 427 RSGILPNKITLVSLLYACSHAGLVEEGLRFFS-----LMWEDYSVRA------------- 468
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM---KDEGLVPNQITFLSVLS 440
++ Y ++ + G +EAL L M KDEGL FL
Sbjct: 469 ------------DVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWG---AFLGACR 513
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAG---SLAEAIDLINSMTF 496
V L E K+ +L ++P P HY + +I AG +A+ DL++
Sbjct: 514 THKDVVLAE------KAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRL 567
Query: 497 EPPPG 501
+ PG
Sbjct: 568 KKIPG 572
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 18/243 (7%)
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
++ GF Y F F E++R RP+ TL V+ A L G IH V K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
++ D + +LV +Y KC + DA +F + ER++V++ MI G+A+ G E+L LF
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFI---YFKSMKTLYNIEPGPEHYACMVDIL 478
KM++EG+VP+++ ++V+ AC +G + + I Y + K ++ G M+D+
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG----TAMIDMY 176
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALL------GAGRTHLNLDLAKLAAQHLMELEPD 532
+ G + A ++ + M E W A++ G GR L+L L++ L PD
Sbjct: 177 AKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML----PD 231
Query: 533 SAT 535
T
Sbjct: 232 KIT 234
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 276/507 (54%), Gaps = 48/507 (9%)
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ NV +W +++ + + F S+R+ G+ + ++C G
Sbjct: 1977 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRM 2036
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
H FGF+ D+ + +++I MY + G + +A +F + R+ VSW S+I+GYV N +
Sbjct: 2037 SHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQ 2096
Query: 250 IEEAYRLFE------------------------------RMPGKDFVSWT---------- 269
+ A LF+ R+ GK
Sbjct: 2097 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 2156
Query: 270 -------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
T++ ++ G S ++F+ M EKDD++W ++I+ + + EA F M
Sbjct: 2157 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 2216
Query: 323 LRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
+R VR N +TLS+VL A A L G IH V+KM++E +V + S++ +Y KCG
Sbjct: 2217 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 2276
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
V A + F + E+N+ S+ +M++G+ +G +EAL++F KM G+ PN ITF+SVL+A
Sbjct: 2277 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 2336
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C+H GLVEEG+ +F +MK Y+IEPG EHY CMVD+ GRAG L EA +LI M +P
Sbjct: 2337 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 2396
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VWG+LLGA R H N+DL ++AAQ L EL+PD+ YV+LS+LY+ G+ D R+RM K
Sbjct: 2397 VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 2456
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRK 588
+++ K PG S + LK +VH+FL G K
Sbjct: 2457 NRQLVKPPGFSLVELKGRVHVFLVGDK 2483
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 206/397 (51%), Gaps = 31/397 (7%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A+I + + D + ++ Y GR+ A +F ++ W ++ E
Sbjct: 48 AKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSE 107
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
L+ +M G+A + T + +AC F G VHG + ++GF D+ + N++I
Sbjct: 108 QALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLI 167
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTT 270
Y + G A ++FE+M ++ VSWTT
Sbjct: 168 DFYFKCG-------------------------------HTRFALKVFEKMRVRNVVSWTT 196
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I+G S G+L+++ +F+ +P K+ V+WTA+I+G++ N+Q EEA F M +++ PN
Sbjct: 197 VISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPN 256
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ T+ S++ A L G IH + +K +E V + +L+ +YSKCG++ DA +F
Sbjct: 257 EYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFE 316
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ +++ ++NSMI+ +GLG+EALNLF +M+ + P+ ITF+ VL AC H+ V+E
Sbjct: 317 TMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKE 376
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
G YF M Y I P PEHY CM ++ R+ +L EA
Sbjct: 377 GCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 213/482 (44%), Gaps = 91/482 (18%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
E D+ +++D Y K G++ +AR +FD++P +NVV+WT+M+ GY++ + ++ LF
Sbjct: 2047 ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKD 2106
Query: 159 MRR--------GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+ +S+ + + AC R VHG V + GFD I +GN+++
Sbjct: 2107 FLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLM 2166
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM---------- 260
Y + G + KVF M ++D +SWNS+I+ Y +G EA +F M
Sbjct: 2167 DAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNA 2226
Query: 261 -----------------PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNM 290
GK + T++I + G +E + + F+
Sbjct: 2227 VTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDR 2286
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M EK+ +WTA+++G+ + + +EA F +M+R V+PN +T SVL+A + + +G
Sbjct: 2287 MKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG 2346
Query: 351 SQ-IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
+A K ++E + +V L+ + G + +AY
Sbjct: 2347 WHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAY----------------------- 2383
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GP 468
NL ++MK + P+ + + S+L AC V+ G I + + L+ ++P
Sbjct: 2384 --------NLIKRMK---MKPDFVVWGSLLGACRIHKNVDLGEI---AAQKLFELDPDNC 2429
Query: 469 EHYACMVDILGRAGSLAEAID---LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
+Y + ++ AG A+ L+ + PPG + + GR H+ L K H
Sbjct: 2430 GYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPG-FSLVELKGRVHVFLVGDKEHPHH 2488
Query: 526 LM 527
M
Sbjct: 2489 EM 2490
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 103/191 (53%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N LI Y K G A ++FE M ++VV+W +++ G G + EAR IFD++P
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
KNVV+WTAM++GY++ E+ +LF M+ + N T+ L +AC G
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + + + LG ++I MY + G + +A +VF M ++ +WNS+I+ +G
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338
Query: 250 IEEAYRLFERM 260
+EA LF M
Sbjct: 339 GQEALNLFSEM 349
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 198/415 (47%), Gaps = 37/415 (8%)
Query: 14 TALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGM----------FYEAE-- 58
+ALI+ + C + +A +F +P+RN VS+ +MITG+V+ F E E
Sbjct: 2054 SALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETE 2113
Query: 59 -ELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYC 113
E N+P DSV +++S +V + +V+K + +++D Y
Sbjct: 2114 VEDGNNVPL---DSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYA 2170
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLT 172
K G+ + ++++FD M EK+ ++W +M+ Y + + ++F M R G+ +N++TL+
Sbjct: 2171 KCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLS 2230
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ AC R G +H V + +Y++ +G SII MY + G ++ A K F M ++
Sbjct: 2231 AVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEK 2290
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELF 288
+ SW ++++GY +G +EA +F +M +++++ +++ S G +E+ F
Sbjct: 2291 NVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWF 2350
Query: 289 NMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
N M K D+ + ++ F EA+ M ++P+ + S+L A
Sbjct: 2351 NAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRM---KMKPDFVVWGSLLGACRI 2407
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
++ G + +++ + + L +LY+ G D R+ + R +V
Sbjct: 2408 HKNVDLGEIAAQKLFELDPD-NCGYYVLLSNLYADAGRWADVERMRMLMKNRQLV 2461
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 145/303 (47%), Gaps = 45/303 (14%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I +S+ G + +I LF + TW II N E+A + M+ + + +
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG---------- 380
+ T V+ A +++ G +H ++K DV +QN+L+ Y KCG
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 381 -----NVV----------------DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
NVV +A RIF I +N+VS+ +MI+G+ +N EEAL L
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDIL 478
F++M+ E + PN+ T +S++ AC +G++ G I+ ++K IE G ++D+
Sbjct: 245 FKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNC--IEIGVYLGTALIDMY 302
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALL------GAGRTHLNLDLAKLAAQHLMELEPD 532
+ GS+ +AI++ +M + P W +++ G G+ LNL + + ++PD
Sbjct: 303 SKCGSIKDAIEVFETMPRKSLP-TWNSMITSLGVHGLGQEALNL----FSEMERVNVKPD 357
Query: 533 SAT 535
+ T
Sbjct: 358 AIT 360
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 10/232 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+ +I+ LI+ + EA IF +P +N VS+ AMI G++R EA EL
Sbjct: 186 MRVRNVVSWTTVISGLISCG-DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 61 YVNMPAR--WRDSVCSNALIS-----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+ M A + + +LI G L +GR I + +E V +++D Y
Sbjct: 245 FKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI-KNCIEIGVYLGTALIDMYS 303
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G + +A E+F+ MP K++ W +M+ ++ +LF M R + ++IT
Sbjct: 304 KCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIG 363
Query: 174 LFEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
+ AC +EG + +G + +Y R +DEA K
Sbjct: 364 VLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
QIHA +++ + +D + L+ LYS G + A +F I ++N +I NG
Sbjct: 45 QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
L E+AL L++ M +G+ ++ TF V+ AC + ++ G + S+
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
+ +D+ N+ S+NS+I+ A+ G EAL F ++ GL+P + +F + +C+ + +
Sbjct: 1972 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 2031
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
G + + ++ E + ++D+ + G L +A L + +
Sbjct: 2032 VSGRMSHQQA-FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPL 2078
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 291/545 (53%), Gaps = 41/545 (7%)
Query: 74 SNALISGYLKVGRC---EEAARIFEAMVEKDVV---AWGSMVDGYC---KKGRVIEAREI 124
SNA + +L + RC EE +I M++ ++ S + +C G + AR +
Sbjct: 16 SNAAQTLHL-LQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTV 74
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD++ N W M+ GY E+ L+ M + N+ T L +AC
Sbjct: 75 FDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSAL 134
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
E Q+H + + GF +I NS++ +Y +
Sbjct: 135 EETQQIHAHIIKMGFGSEIYTTNSLLNVYSK----------------------------- 165
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
+G+I+ A LF+++ +D VSW +MI G++ G +E + E+FN MPE++ ++WT++IS
Sbjct: 166 --SGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMIS 223
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G V + +EA F M ++ + + L S L A A L+QG IHA++ K +E
Sbjct: 224 GCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEI 283
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D + L+ +Y+KCG++ +A +F ++E+ + + +MISG+A +G G EAL F KM+
Sbjct: 284 DPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQ 343
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
G+ PNQ+TF +L+AC+H GLV E + F+SM+ ++ +P EHY CMVD+LGRAG L
Sbjct: 344 TAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLL 403
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA +LI +M +P +WGALL A H NL+L K + L++++P Y+ L+ ++
Sbjct: 404 KEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIH 463
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
+ G+ RVR + K + + K PGCS I + H FLAG +S +KEI+ L+ I
Sbjct: 464 AAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIV 523
Query: 605 KGTKE 609
+ +E
Sbjct: 524 ERLRE 528
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 184/447 (41%), Gaps = 55/447 (12%)
Query: 19 NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNA-- 76
N+ S+ A +F + N + MI G+ EA LY +M SV NA
Sbjct: 64 NSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHM---LYHSVPHNAYT 120
Query: 77 ---LISGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
L+ + EE +I +++ ++ S+++ Y K G + AR +FD++
Sbjct: 121 FPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVD 180
Query: 130 EKNVVAWTAMVDGYMKVDCFE-------------------------------DGFDLFLS 158
+++ V+W +M+DGY K E + +LF
Sbjct: 181 QRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHR 240
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M+ G+ +++ L +AC +G +H + + + D ILG +I MY + G
Sbjct: 241 MQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGD 300
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITG 274
++EA +VF M ++ W ++ISGY +G EA F +M + +++T ++T
Sbjct: 301 LEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTA 360
Query: 275 FSSKGNLEKSIELFNMMPE----KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
S G + ++ LF M K + + + + IE + V+PN
Sbjct: 361 CSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENM--PVKPN 418
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
++L+A L G QI +++++ + L S+++ G A R+
Sbjct: 419 AAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIH-LASIHAAAGEWNQAARVRR 477
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEAL 417
+ E+ VS S + NG E L
Sbjct: 478 QMKEQG-VSKLPGCSVISVNGTAHEFL 503
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 272/516 (52%), Gaps = 39/516 (7%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
YC G I+ +++FD+M KN+V+W ++ Y K E LF M+ G+ NS
Sbjct: 132 YCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVY 191
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
L ++C G Q+H V R + +I + +I MY R G+++ A VF M
Sbjct: 192 MSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDA 251
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFV------------SW------ 268
++AV+W L+ GY ++E A LF RM + +FV W
Sbjct: 252 QNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQI 311
Query: 269 ----------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
T ++ + G++E + F + E +DV+W+A+ISGF + +
Sbjct: 312 HSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRL 371
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
E+ + F + + V N +SV A AA A LN GSQ H +K + S + ++++
Sbjct: 372 EDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAM 431
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V++YSKCG + A R F +IDE + V++ ++ISG+A +G EAL FR+M+ G+ PN
Sbjct: 432 VTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNA 491
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
+TF++VL+AC+H GLV E Y SM Y ++P +HY CM+D RAG L EA++LIN
Sbjct: 492 VTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELIN 551
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
M FEP W +LLG H +L L K+AA++L L+P Y++L +LYS GK +
Sbjct: 552 RMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEE 611
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
VR + ++K CSWI +K +VH F+ G +
Sbjct: 612 AGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDR 647
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 178/410 (43%), Gaps = 49/410 (11%)
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
++ D M ++ + LFEACG+ +G +H + R + + N
Sbjct: 68 LKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENC 127
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------- 261
++ MY G + KVF M ++ VSW +IS Y NGE+E+A RLF M
Sbjct: 128 LLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187
Query: 262 ------------GKDFVSW--------------------TTMITGFSSKGNLEKSIELFN 289
G F+ T + + G LE + +F+
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
M ++ VTWT ++ G+ ++ E A F M + V ++ S VL +
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDM 307
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G QIH+H+VK+ ES+VS+ LV Y KCG++ AYR F I E N VS++++ISGF+Q
Sbjct: 308 GRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+G E+ + +F ++ EG+V N + SV AC + + S I+ G
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQAC-----AAQANLNMGSQAHGDAIKRGLV 422
Query: 470 HY----ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
Y + MV + + G L A S+ EP W A++ H N
Sbjct: 423 SYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 218/492 (44%), Gaps = 83/492 (16%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCS 74
S + ++F M M+N VS+ +I+ + + G +A L+ +M A S+
Sbjct: 137 SCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQ 196
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+ L +L++G+ + + + A + ++ ++ + Y + G + A+ +FD M +N V
Sbjct: 197 SCLGPSFLELGK-QIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAV 255
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
WT ++ GY + E +LF M G+ + +I+ + C + G Q+H +
Sbjct: 256 TWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHI 315
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G + ++ +G ++ Y + G ++ A + F +S+ + VSW++LISG+ +G +E+
Sbjct: 316 VKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCI 375
Query: 255 RLFERMPG-----------------------------------KDFVSW----TTMITGF 275
++F + + VS+ + M+T +
Sbjct: 376 KIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMY 435
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
S G L+ + F + E D V WTAIISG+ + EA +F M VRPN +T
Sbjct: 436 SKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFI 495
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VL+A + + + + Q G++ Y + ID
Sbjct: 496 AVLTACSHSGLVAEAKQY-------------------------LGSMSRDYGVKPTIDH- 529
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
Y+ MI +++ GL +EAL L +M E P+ +++ S+L C ++ G I
Sbjct: 530 ----YDCMIDTYSRAGLLQEALELINRMPFE---PDAMSWKSLLGGCWAHCDLKLGKI-- 580
Query: 456 KSMKTLYNIEPG 467
+ + L+ ++PG
Sbjct: 581 -AAENLFRLDPG 591
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%)
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+ +EA + EM DV + + A +L G IH + + SI+N
Sbjct: 67 KLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIEN 126
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
L+ +Y CG+ +D ++F + +N+VS+ +IS +A+NG E+A+ LF M+ G+ P
Sbjct: 127 CLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRP 186
Query: 431 NQITFLSVLSACNHVGLVEEG 451
N ++S+L +C +E G
Sbjct: 187 NSAVYMSLLQSCLGPSFLELG 207
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 185/589 (31%), Positives = 307/589 (52%), Gaps = 34/589 (5%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
EA +F M R RRG A L + + A + L+ G+L
Sbjct: 139 EAIAVFREMQARGVPR---------RRGRAVHAYALKLALDA--------HPLVPGFLAG 181
Query: 85 GRCEEA-----ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM----PEKNVVA 135
E A R+ +AM VV W ++V + G V +A E+ +M PE NV
Sbjct: 182 MYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVAT 241
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W ++ G + + + SM + G+ ++ T++ L ++ R G+++H
Sbjct: 242 WNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFL 301
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R + D+ G +++ MY + G +D A KVF + R+ +WNSL++GY + G + A
Sbjct: 302 RNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALE 361
Query: 256 LFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVTWTAIISGFV 307
L E M D +W +ITG+S G +++ L + + V+WT++ISG
Sbjct: 362 LVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSC 421
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
+N +YE++F + EM + V+P+ +T+S +L A A A +G ++H ++ + D+
Sbjct: 422 HNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMV 481
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ +L+ +YSK G++V A IF +I ++N+V N+M++G A +G G EA+ LF M + G
Sbjct: 482 VSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSG 541
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
L P+ ITF ++L+AC +GLV EG+ YF M+T Y ++P E+YACMVD+L R G L EA
Sbjct: 542 LKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEA 601
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+D I +P WGALL H NL LA++AA++L LEP ++ Y+++ +LY
Sbjct: 602 MDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFRLEPYNSANYLLMMNLYEYE 661
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
+ ++ K + + PG SWI ++ +H+F K + EI
Sbjct: 662 RMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEI 710
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
KD V W ++ E+++EA F EM + V P + +G +
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGV-PRR-----------------RGRAV 160
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
HA+ +K+ +++ + L +Y++ +V A R+ + ++V +N++++ A+ GL
Sbjct: 161 HAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLV 220
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++AL L +M G PN T+ +VLS C+ G E SM
Sbjct: 221 DDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASM 265
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR- 69
TALI+ S+ A IF ++ +N V AM+TG G EA EL+ +M W
Sbjct: 484 TALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDM---WNS 540
Query: 70 ----DSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIE 120
DS+ AL++ +G E F+ M V+ + MVD + G + E
Sbjct: 541 GLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDE 600
Query: 121 AREIFDKMP-EKNVVAWTAMVDG 142
A + ++ P + W A++ G
Sbjct: 601 AMDFIERSPIDPGASHWGALLTG 623
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 307/585 (52%), Gaps = 34/585 (5%)
Query: 25 EAFEIFATMPMRNA---------VSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN 75
EA +F M R V +A G +R G A L + + A +
Sbjct: 139 EAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDA--------H 190
Query: 76 ALISGYLKVGRCEEA-----ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM-- 128
L+ G+L E A R+ +AM VV W ++V + G V +A E+ +M
Sbjct: 191 PLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSR 250
Query: 129 --PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
PE NV W ++ G + + + SM + G+ ++ T++ L ++ R
Sbjct: 251 SGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRH 310
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G+++H R + D+ G +++ MY + G +D A KV + R+ +WNSL++GY +
Sbjct: 311 GMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYAN 370
Query: 247 NGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVT 298
G + A L E M D +W +ITG+S G +++ L + + V+
Sbjct: 371 AGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVS 430
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WT++ISG +N +YE++F + EM + V+P+ +T+S +L A A A +G ++H +
Sbjct: 431 WTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFAL 490
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ + D+ + +L+ +YSK G++V A IF +I ++N+V N+M++G A +G G EA+
Sbjct: 491 RRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIE 550
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF M + GL P+ ITF ++L+AC +GLV EG+ YF SM+T Y ++P E+YACMVD+L
Sbjct: 551 LFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLL 610
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
R G L EA+D I +P WGALL H NL LA++AA++L LEP ++ Y+
Sbjct: 611 ARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYL 670
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
++ +LY + ++ K + + PG SWI ++ +H+F
Sbjct: 671 LMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVF 715
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 165/391 (42%), Gaps = 65/391 (16%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPE---KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
++VD + GR + + E K+ V W V + + +++ +F M+ G
Sbjct: 92 ALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARG 151
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+ + T + ACGR REG VH + D ++ + MY + A
Sbjct: 152 VPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAAT 211
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEK 283
+V M V WN++++ G +++A L RM S+ E
Sbjct: 212 RVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARM----------------SRSGPEP 255
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
++ TW ++SG + + EA ML++ +RP+ T+SS+L + A
Sbjct: 256 NV-----------ATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVAN 304
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
T L G +IH ++ +E DV +LV +Y+KCG + A ++ ++ RN+ ++NS+
Sbjct: 305 TGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSL 364
Query: 404 ISGFAQ-----------------------------------NGLGEEALNLFRKMKDEGL 428
++G+A NG +A+ L R++K G+
Sbjct: 365 VAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGV 424
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
PN +++ S++S H G E+ F + M+
Sbjct: 425 TPNVVSWTSLISGSCHNGEYEDSFYFCHEMQ 455
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR- 69
TALI+ S+ A IF ++ +N V AM+TG G EA EL+ +M W
Sbjct: 502 TALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDM---WNS 558
Query: 70 ----DSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIE 120
DS+ AL++ +G E F++M V+ + MVD + G + E
Sbjct: 559 GLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDE 618
Query: 121 AREIFDKMP-EKNVVAWTAMVDG 142
A + ++ P + W A++ G
Sbjct: 619 AMDFIERSPIDPGASHWGALLTG 641
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/594 (31%), Positives = 316/594 (53%), Gaps = 42/594 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALIS 79
+++ A IF + + Y +I F + G F +A L+ + D+ +
Sbjct: 81 NLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFK 140
Query: 80 GYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+G E +++ +V E D S++D Y + GRV R++F++MP+++VV+
Sbjct: 141 AIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVS 200
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W ++ GY+K +ED D+F M++ + N T+ AC G ++H V
Sbjct: 201 WNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYV 260
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
R + I +GN+++ MY + G + A ++
Sbjct: 261 -REQLGFTIKIGNALVDMYCKCGHLSIAREI----------------------------- 290
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
F MP K + WT+M++G+ + G L+++ ELF P +D V WTA+I+G+V ++++
Sbjct: 291 --FNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDD 348
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F EM K V P++ TL ++L+ A TL QG IH ++ + + D + +L+
Sbjct: 349 AVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIE 408
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+KCG + + IF + E++ S+ S+I G A NG +AL LF +M G+ P+ IT
Sbjct: 409 MYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDIT 468
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN-- 492
F+ VLSAC+H GLVEEG +F+SM +Y IEP EHY C++D+LGRAG L EA +LI
Sbjct: 469 FIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKS 528
Query: 493 -SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
++ E ++GALL A RTH N+++ + A+ L+ +E ++ + +L+++Y+ +
Sbjct: 529 PNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWE 588
Query: 552 DGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
D +VR K K ++K PGCS + + VH FL G S +++EI L +I+K
Sbjct: 589 DVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAK 642
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 198/439 (45%), Gaps = 40/439 (9%)
Query: 1 MADRTSASYNAMITALINNNCSIYE-AFEIFATMPMR-----NAVSYAAMITGFVRRGMF 54
M R S+N +I+ + C YE A ++F M + N + + ++ + M
Sbjct: 193 MPQRDVVSWNVLISGYVK--CRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKML 250
Query: 55 YEAEELYVNMPARWRDSV-CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+E++ + + ++ NAL+ Y K G A IF M K V+ W SMV GY
Sbjct: 251 ELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYV 310
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
G++ EARE+F++ P ++VV WTAM++GY++ + F+D LF M+ ++ + TL
Sbjct: 311 NCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVA 370
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L C + +G +HG + D ++G ++I MY + GF++++ ++F+ + ++D
Sbjct: 371 LLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKD 430
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
SW S+I G NG+ +A LF M + TG +
Sbjct: 431 TASWTSIICGLAMNGKTSKALELFAEM----------VQTGV-----------------K 463
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQ 352
DD+T+ ++S + EE + F M + P ++ L++ +
Sbjct: 464 PDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEE 523
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI---FTNIDERNIVSYNSMISGFAQ 409
+ +N E V + +L+S GNV R+ I+ + + + + +A
Sbjct: 524 LIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYAS 583
Query: 410 NGLGEEALNLFRKMKDEGL 428
E+ + RKMKD G+
Sbjct: 584 ADRWEDVTKVRRKMKDLGV 602
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 117/221 (52%), Gaps = 7/221 (3%)
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
S GNL + +FN + + +I F N + +A F ++ + + P+ T
Sbjct: 78 SIGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPF 137
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
V A + +G +++ VVK +E D + NSL+ +Y++ G V + ++F + +R+
Sbjct: 138 VFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRD 197
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDE-GLVPNQITFLSVLSACNHVGLVEEGFIYF 455
+VS+N +ISG+ + E+A+++FR+M+ + L PN+ T +S LSAC + ++E G
Sbjct: 198 VVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIH 257
Query: 456 KSMKTL--YNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ ++ + I+ G +VD+ + G L+ A ++ N M
Sbjct: 258 RYVREQLGFTIKIG----NALVDMYCKCGHLSIAREIFNDM 294
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 190/617 (30%), Positives = 325/617 (52%), Gaps = 60/617 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--VNMPARWRDSVCSNALIS--GY 81
A ++F M R+ +SY +I+G+ G +++A L+ M D ++S G
Sbjct: 63 AQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQ 122
Query: 82 LK---VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+K +G+ I + ++ V ++D YCK R+ AR +F+ E + V+W +
Sbjct: 123 IKDFALGKVIHGLAIVCGLGQQ-VFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNS 181
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC----GRFFRYREGVQVHGLV 194
++ GY +V +E+ L + M G+ N+ TL ++C Y G +HG
Sbjct: 182 LITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSY--GKTLHGYT 239
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE--- 251
+ G D DI++G +++ MY + G++ +A ++F ++ V +N++I+G++ +I+
Sbjct: 240 VKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKEC 299
Query: 252 --EAYRLFERMP--------------------------GK--------------DFVSWT 269
EA +LF +M GK +F+ +
Sbjct: 300 AYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIG-S 358
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
T+I +S G+ E ++ FN P+ D V+WT +I+G+ N Q+E A F E+L +P
Sbjct: 359 TLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKP 418
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
++ ++++LSA A A G Q+H + VK + + +QNS +S+Y+K GN+ A F
Sbjct: 419 DEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITF 478
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
I ++VS++ MI AQ+G ++A+NLF MK G+ PNQITFL VL+AC+H GLVE
Sbjct: 479 EEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVE 538
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
EG Y++SMK Y+++ +H C+VD+L RAG L +A + I + F P +W LL
Sbjct: 539 EGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSG 598
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
R + ++ K A+ L+EL+P ++ YV+L ++Y+ G ++R K + IRK P
Sbjct: 599 CRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEP 658
Query: 570 GCSWIILKDKVHLFLAG 586
G SWI + ++VH F+ G
Sbjct: 659 GQSWIEVGNEVHSFVVG 675
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 169/367 (46%), Gaps = 60/367 (16%)
Query: 182 FRYREGVQVHGLVS-----RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
F + G +HG ++ + F+ + L N+ + +Y + G M A K+F MS+R +S
Sbjct: 18 FSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVIS 77
Query: 237 WNSLISGYVHNGEIEEAYRLFE--RMPG------------------KDFVSWTTMITGFS 276
+N LISGY G +A LF RM KDF + +I G +
Sbjct: 78 YNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDF-ALGKVIHGLA 136
Query: 277 SKGNLEKSIELFNMM--------------------PEKDDVTWTAIISGFVNNEQYEEAF 316
L + + L N++ E D+V+W ++I+G+ YEE
Sbjct: 137 IVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEML 196
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATAT--LNQGSQIHAHVVKMNMESDVSIQNSLVS 374
+ ++M +R N TL S L + ++ G +H + VK ++ D+ + +L+
Sbjct: 197 KLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLD 256
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN-----GLGEEALNLFRKMKDEGLV 429
+Y+K G + DA ++F +N+V YN+MI+GF Q EAL LF +M+ +G+
Sbjct: 257 MYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIK 316
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTL---YNIEPGPEHYACMVDILGRAGSLAE 486
P+ TF S++ CNH+ E F Y K + +NI+ + ++++ GS +
Sbjct: 317 PSDFTFSSIIKICNHI----EAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTED 372
Query: 487 AIDLINS 493
+ NS
Sbjct: 373 QLKCFNS 379
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIH-----AHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
P+ L SV + GS IH AH++K + + N+ ++LYSK G +
Sbjct: 2 PSVFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMG 61
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+A ++F + ER+++SYN +ISG+ G +A+ LF + + L ++ ++ VLSAC
Sbjct: 62 NAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACG 121
Query: 444 HV 445
+
Sbjct: 122 QI 123
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 196/572 (34%), Positives = 290/572 (50%), Gaps = 54/572 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
AF+ T+P+ A+ A ++G R D +++L+ YL++G
Sbjct: 26 AFKSCPTLPLARALHAVAEVSGLAR-------------------DPFVASSLLHAYLRLG 66
Query: 86 RCEEAARIFEAMV--EKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-----EKNVVAWTA 138
A +F+ M ++ VV W ++V + +G A + ++M E NV+ W
Sbjct: 67 TTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNG 126
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT-LTILFEACGRFFRYREGVQVHGLVSRF 197
+V G + D +M G+ T ++ A G G Q+HG +
Sbjct: 127 LVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKA 186
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G D + ++I MYG+ G E +VF S D S N+LI+G N ++ EA RLF
Sbjct: 187 GCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLF 246
Query: 258 ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
K+FV ++ +EL + V+WT+I++ V N + EA
Sbjct: 247 -----KEFV---------------DRGVEL-------NVVSWTSIVACCVQNGKDLEAVE 279
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
+F EM + PN +T+ VL A A A L G H ++ DV + ++LV +Y+
Sbjct: 280 FFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYA 339
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
KCG V DA IF + RN+VS+N+MI G+A G A+ +F M P+ +TF
Sbjct: 340 KCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTC 399
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
+L+AC GL EEG YFK M Y + P EHYACMV +LGRAG L EA DLI+ M FE
Sbjct: 400 LLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFE 459
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
P +WG+LLG+ R H N+DLA++AA+ L LEP++A YV+LS++Y+ NRVR
Sbjct: 460 PDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVR 519
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
K ++K GCSWI +K+KVH+ LAG S
Sbjct: 520 EMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDS 551
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 185/444 (41%), Gaps = 62/444 (13%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATM-------PMRNAVSYAAMITGFVRRGMFYEAEEL 60
++N +++ L N + +A ATM P VS A G V G+ ++L
Sbjct: 123 TWNGLVSGL-NRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDV--GLVSVGQQL 179
Query: 61 Y-VNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
+ + A R C ALI Y K G+ E R+F+ DV + +++ G + +V
Sbjct: 180 HGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQV 239
Query: 119 IEA----REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL-----FLSMRRGGMAFNSI 169
EA +E D+ E NVV+WT++V C ++G DL F M+ G NS+
Sbjct: 240 CEALRLFKEFVDRGVELNVVSWTSIV-----ACCVQNGKDLEAVEFFREMQAQGTEPNSV 294
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T+ + A G H R GF +D+ + ++++ MY + G + +A +F M
Sbjct: 295 TIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTM 354
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
R+ VSWN++I GY GE A +F M
Sbjct: 355 VSRNVVSWNAMIGGYAMYGEAVNAVWMFHSM---------------------------LK 387
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLN 348
+ D VT+T +++ EE +F EM + V P + +++ L+
Sbjct: 388 CKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLD 447
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV----VDAYRIFTNIDERNIVSYNSMI 404
+ + + M E D I SL+ GNV V A ++F +++ N +Y +
Sbjct: 448 EAYDL---ISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLF-HLEPENAGNYVLLS 503
Query: 405 SGFAQNGLGEEALNLFRKMKDEGL 428
+ +A + + + MKD GL
Sbjct: 504 NIYASKKMWDRVNRVREMMKDVGL 527
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 307/585 (52%), Gaps = 34/585 (5%)
Query: 25 EAFEIFATMPMRNA---------VSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN 75
EA +F M R V +A G +R G A L + + A +
Sbjct: 139 EAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDA--------H 190
Query: 76 ALISGYLKVGRCEEA-----ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM-- 128
L+ G+L E A R+ +AM VV W ++V + G V +A E+ +M
Sbjct: 191 PLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSR 250
Query: 129 --PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
PE NV W ++ G + + + SM + G+ ++ T++ L ++ R
Sbjct: 251 SGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRH 310
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G+++H R + D+ G +++ MY + G +D A KV + R+ +WNSL++GY +
Sbjct: 311 GMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYAN 370
Query: 247 NGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVT 298
G + A L E M D +W +ITG+S G +++ L + + V+
Sbjct: 371 AGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVS 430
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WT++ISG +N +YE++F + EM + V+P+ +T+S +L A A A +G ++H +
Sbjct: 431 WTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFAL 490
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ + D+ + +L+ +YSK G++V A IF +I ++N+V N+M++G A +G G EA+
Sbjct: 491 RRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIE 550
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF M + GL P+ ITF ++L+AC +GLV EG+ YF SM+T Y ++P E+YACMVD+L
Sbjct: 551 LFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLL 610
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
R G L EA+D I +P WGALL H NL LA++AA++L LEP ++ Y+
Sbjct: 611 ARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYL 670
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
++ +LY + ++ K + + PG SWI ++ +H+F
Sbjct: 671 LMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVF 715
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 165/391 (42%), Gaps = 65/391 (16%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPE---KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
++VD + GR + + E K+ V W V + + +++ +F M+ G
Sbjct: 92 ALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARG 151
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+ + T + ACGR REG VH + D ++ + MY + A
Sbjct: 152 VPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAAT 211
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEK 283
+V M V WN++++ G +++A L RM S+ E
Sbjct: 212 RVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARM----------------SRSGPEP 255
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
++ TW ++SG + + EA ML++ +RP+ T+SS+L + A
Sbjct: 256 NV-----------ATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVAN 304
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
T L G +IH ++ +E DV +LV +Y+KCG + A ++ ++ RN+ ++NS+
Sbjct: 305 TGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSL 364
Query: 404 ISGFAQ-----------------------------------NGLGEEALNLFRKMKDEGL 428
++G+A NG +A+ L R++K G+
Sbjct: 365 VAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGV 424
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
PN +++ S++S H G E+ F + M+
Sbjct: 425 TPNVVSWTSLISGSCHNGEYEDSFYFCHEMQ 455
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR- 69
TALI+ S+ A IF ++ +N V AM+TG G EA EL+ +M W
Sbjct: 502 TALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDM---WNS 558
Query: 70 ----DSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIE 120
DS+ AL++ +G E F++M V+ + MVD + G + E
Sbjct: 559 GLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDE 618
Query: 121 AREIFDKMP-EKNVVAWTAMVDG 142
A + ++ P + W A++ G
Sbjct: 619 AMDFIERSPIDPGASHWGALLTG 641
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 291/545 (53%), Gaps = 41/545 (7%)
Query: 74 SNALISGYLKVGRC---EEAARIFEAMVEKDVV---AWGSMVDGYC---KKGRVIEAREI 124
SNA + +L + RC EE +I M++ ++ S + +C G + AR +
Sbjct: 16 SNAAQTLHL-LQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTV 74
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
FD++ N W M+ GY E+ L+ M + N+ T L +AC
Sbjct: 75 FDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSAS 134
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
E Q+H + + GF +I NS++ +Y +
Sbjct: 135 EETQQIHAHIIKMGFGSEIYTTNSLLNVYSK----------------------------- 165
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
+G+I+ A LF+++ +D VSW +MI G++ G +E + E+FN MPE++ ++WT++IS
Sbjct: 166 --SGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMIS 223
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G V + +EA F M ++ + + L S L A A L+QG IHA++ K +E
Sbjct: 224 GCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEI 283
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D + L+ +Y+KCG++ +A +F ++E+ + + +MISG+A +G G EAL F KM+
Sbjct: 284 DPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQ 343
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
G+ PNQ+TF +L+AC+H GLV E + F+SM+ ++ +P EHY CMVD+LGRAG L
Sbjct: 344 TAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLL 403
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA +LI +M +P +WGALL A H NL+L K + L++++P Y+ L+ ++
Sbjct: 404 KEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIH 463
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
+ G+ RVR + K + + K PGCS I + H FLAG +S +KEI+ L+ I
Sbjct: 464 AAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIV 523
Query: 605 KGTKE 609
+ +E
Sbjct: 524 ERLRE 528
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 184/447 (41%), Gaps = 55/447 (12%)
Query: 19 NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNA-- 76
N+ S+ A +F + N + MI G+ EA LY +M SV NA
Sbjct: 64 NSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHM---LYHSVPHNAYT 120
Query: 77 ---LISGYLKVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
L+ + EE +I +++ ++ S+++ Y K G + AR +FD++
Sbjct: 121 FPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVD 180
Query: 130 EKNVVAWTAMVDGYMKVDCFE-------------------------------DGFDLFLS 158
+++ V+W +M+DGY K E + +LF
Sbjct: 181 QRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHR 240
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M+ G+ +++ L +AC +G +H + + + D ILG +I MY + G
Sbjct: 241 MQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGD 300
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITG 274
++EA +VF M ++ W ++ISGY +G EA F +M + +++T ++T
Sbjct: 301 LEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTA 360
Query: 275 FSSKGNLEKSIELFNMMPE----KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
S G + ++ LF M K + + + + IE + V+PN
Sbjct: 361 CSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENM--PVKPN 418
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
++L+A L G QI +++++ + L S+++ G A R+
Sbjct: 419 AAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIH-LASIHAAAGEWNQAARVRR 477
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEAL 417
+ E+ VS S + NG E L
Sbjct: 478 QMKEQG-VSKLPGCSVISVNGTAHEFL 503
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/532 (34%), Positives = 290/532 (54%), Gaps = 47/532 (8%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGR-VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
A + ++ +E D S++ Y K G E R++FD + K+V++WT+M+ GY++V
Sbjct: 83 AHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKP 142
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
+ +LF M G+ N+ TL+ + +AC + G HG+V GFD + ++ +++
Sbjct: 143 MNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASAL 202
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-------- 261
I M+GR +D+A ++F + + DA+ W S+IS N +EA R F M
Sbjct: 203 IDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPD 262
Query: 262 -------------------GKDFVSWTTMITGFSSK--------------GNLEKSIELF 288
GK+ V + TGF G++ +S +F
Sbjct: 263 GFTFGTVLTACGNLGRLKQGKE-VHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIF 321
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ MP K+ V+W+A++ G+ N F+ I++ RK + + ++L A A +
Sbjct: 322 DRMPIKNSVSWSALLGGYCQNGD----FKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVR 377
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
QG ++H ++ DV ++++LV LY+KCG + A IF + RN++++NSMI GFA
Sbjct: 378 QGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFA 437
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
QNG GEEAL +F +M EG+ P+ I+F+ +L AC+H GLV+EG YF SM Y I+ G
Sbjct: 438 QNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGI 497
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
EHY+CMVD+LGRAG L EA LI + F +W ALLGA T N ++A+ A+ +ME
Sbjct: 498 EHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVME 557
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
LEPD YV+L+++Y +G+ D R+R K + + K PG SWI K+ +
Sbjct: 558 LEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNL 609
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 212/435 (48%), Gaps = 53/435 (12%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N+++T E ++F + +++ +S+ +MI+G+VR G + EL+ M A
Sbjct: 98 NSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY-- 155
Query: 70 DSVCSNAL-ISGYLKVGRCEE-----AARIFEAMV-----EKDVVAWGSMVDGYCKKGRV 118
V NA +S +K C E RIF +V + + V +++D + + +
Sbjct: 156 -GVEPNAFTLSAVIKA--CSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCAL 212
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEA 177
+AR++FD++ E + + WT+++ + D F++ F SM+R GM + T + A
Sbjct: 213 DDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTA 272
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
CG R ++G +VH V GF ++++ +S++ MYG+ G + E+ ++F M +++VSW
Sbjct: 273 CGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSW 332
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTT--------------------------- 270
++L+ GY NG+ + ++F +M D + T
Sbjct: 333 SALLGGYCQNGDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGW 392
Query: 271 --------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
++ ++ G +E + +F+ MP ++ +TW ++I GF N + EEA R F +M
Sbjct: 393 RDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQM 452
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYSKCGN 381
+++ ++P+ ++ +L A + +++G + + K ++ + + +V L + G
Sbjct: 453 VKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGL 512
Query: 382 VVDAYRIFTNIDERN 396
+ +A + D R+
Sbjct: 513 LEEAEILIETSDFRD 527
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 186/401 (46%), Gaps = 53/401 (13%)
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
L S+ G ++ + L + C + + G+Q+H V + G ++D +GNS++T+
Sbjct: 44 LQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTL 103
Query: 213 YGRLGF-MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG--------- 262
Y +LG E KVF + +D +SW S+ISGYV G+ + LF +M
Sbjct: 104 YFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFT 163
Query: 263 ------------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
++V + +I L+ + +LF+ +
Sbjct: 164 LSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELL 223
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGS 351
E D + WT+IIS N+ ++EA R+F M R + P+ T +VL+A L QG
Sbjct: 224 EPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGK 283
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
++HA V+ +V +++SLV +Y KCG+V ++ RIF + +N VS+++++ G+ QNG
Sbjct: 284 EVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNG 343
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
+ + +FRKM+ L F ++L C + V +G K + Y + G
Sbjct: 344 DFKSVIQIFRKMEKVDLY----CFGTILRTCAGLAAVRQG----KEVHCQYIRKGGWRDV 395
Query: 472 ---ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+ +VD+ + G + A + + M W +++G
Sbjct: 396 IVESALVDLYAKCGCIEYAQTIFDQMPVRNLI-TWNSMIGG 435
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 121/246 (49%), Gaps = 12/246 (4%)
Query: 323 LRKDVRPNQLTLSSVLSAS-----AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
L K + P +++ VL AS N G QIHAHV+K +E D + NSL++LY
Sbjct: 46 LLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYF 105
Query: 378 KCG-NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
K G + + ++F + ++++S+ SMISG+ + G +L LF KM G+ PN T
Sbjct: 106 KLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLS 165
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
+V+ AC+ +G ++ G I F + + + ++D+ GR +L +A L + +
Sbjct: 166 AVIKACSELGDLKLGRI-FHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL-L 223
Query: 497 EPPPGVWGALLGAGRTHLNLDLAK---LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
EP W +++ A + D A + Q + PD T VL+ + +G+ + G
Sbjct: 224 EPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN-LGRLKQG 282
Query: 554 NRVRMK 559
V K
Sbjct: 283 KEVHAK 288
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 14/248 (5%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ E+ IF MP++N+VS++A++ G+ + G F +++ M D C ++
Sbjct: 313 SVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEK--VDLYCFGTILRTC 370
Query: 82 LKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ + + + K DV+ ++VD Y K G + A+ IFD+MP +N++ W
Sbjct: 371 AGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWN 430
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
+M+ G+ + E+ +F M + G+ + I+ + AC EG + +++
Sbjct: 431 SMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTK- 489
Query: 198 GFDYDIILG----NSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLISGYVHNGEIEE 252
DY I +G + ++ + GR G ++EA + RD S W +L+ E
Sbjct: 490 --DYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEI 547
Query: 253 AYRLFERM 260
A R+ +R+
Sbjct: 548 AERIAKRV 555
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/506 (33%), Positives = 275/506 (54%), Gaps = 34/506 (6%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+++ Y + G ++A+++F+ + ++V+WT ++ Y+ F +F + G+ +
Sbjct: 43 LLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPD 102
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
S + ACG G VHG+V RF D I+GN++I MY R
Sbjct: 103 SFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSR------------ 150
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
+G IE A +F+ M KD SWT+++ GF ++E + +
Sbjct: 151 -------------------SGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRI 191
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR--PNQLTLSSVLSASAATA 345
F+ MP ++ V+WTA+I+G+V E F EM R + + P +T+ +VLS A
Sbjct: 192 FDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEM-RAEGKDWPTVITIVAVLSGCADIG 250
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+ GS +H +V K N++ DV++ N+L+ +Y+K G +V A +IF + +R++ S+ +MIS
Sbjct: 251 AFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMIS 310
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G A +G G AL F M G+VPN++T LSVLSAC+H GLV EG F+ M + I+
Sbjct: 311 GLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIK 370
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
P +HY CMVD+LGRAG L EA +LI M +P +W +LL A H NL LA++A +
Sbjct: 371 PKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKM 430
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
++ELEPD Y++L ++Y + D + R + +R++K PGCSW+ + VH FLA
Sbjct: 431 IIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLA 490
Query: 586 GRKSCLDLKEIEVTLQTISKGTKEFD 611
++ L+ I++ K+ D
Sbjct: 491 EDAVHCIRADVYTVLEAITEQMKDLD 516
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 167/365 (45%), Gaps = 16/365 (4%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D + NALI Y + G E A +F+ M KDV +W S+++G+ K + AR IFD+MP
Sbjct: 137 DPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMP 196
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS-ITLTILFEACGRFFRYREGV 188
+N V+WTAM+ GY++ + G +LF MR G + + IT+ + C + G
Sbjct: 197 MRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGS 256
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
VHG V++ D D+ + N+++ MY + G + A K+F M KRD SW ++ISG +G
Sbjct: 257 SVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHG 316
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVTWT 300
+ A F M V+ ++++ S G + + LF M + K +
Sbjct: 317 KGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHY 376
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+ + + IE + ++P+ + S+LSA L ++++
Sbjct: 377 GCMVDLLGRAGLLREAKELIEHM--PIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIEL 434
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM----ISGFAQNGLGEEA 416
+ D + L ++Y DA + + +R + ++G L E+A
Sbjct: 435 EPDDD-GVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLAEDA 493
Query: 417 LNLFR 421
++ R
Sbjct: 494 VHCIR 498
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 129/271 (47%), Gaps = 28/271 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + +S+ +++ I N I A IF MPMRN+VS+ AMITG+V+ + EL
Sbjct: 164 MEIKDVSSWTSLLNGFIKCN-DIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLEL 222
Query: 61 YVNMPAR---WRDSVCSNALISGYLKVGRCEEAARIF----EAMVEKDVVAWGSMVDGYC 113
+ M A W + A++SG +G + + + + ++ DV +++D Y
Sbjct: 223 FQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYA 282
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G ++ A +IF +MP+++V +WT M+ G + F M + G+ N +TL
Sbjct: 283 KSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLS 342
Query: 174 LFEACGRFFRYREG-------VQVHGL---VSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+ AC EG VQ HG+ + +G D++ GR G + EA
Sbjct: 343 VLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLL---------GRAGLLREAK 393
Query: 224 KVFSMMS-KRDAVSWNSLISGYVHNGEIEEA 253
++ M K D+V W SL+S + +G + A
Sbjct: 394 ELIEHMPIKPDSVIWRSLLSACLVHGNLALA 424
>gi|302802806|ref|XP_002983157.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
gi|300149310|gb|EFJ15966.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
Length = 704
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/620 (29%), Positives = 329/620 (53%), Gaps = 42/620 (6%)
Query: 18 NNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNAL 77
+ N + A IF +P N VS+ ++I GF + G A+E++ MP RW S N++
Sbjct: 5 SENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMP-RWSSSSW-NSM 62
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE-IFDKMPEKNVVAW 136
I+GY + G A +F+ E +V++W +++ GY + EA+ IFD+MP + V+W
Sbjct: 63 ITGYAQSGDLAGATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVIFDEMPRREEVSW 122
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
A++ Y + F M R + + T L G+ + E ++ L+
Sbjct: 123 NALLSAYAQAGHVHLARSTFERMPR----HDVVAWTALIAVSGQNGQLEEAEVLYDLIP- 177
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
+ D++ ++I YG G + E+ +V+++M +R+ VS ++I Y NGE+ +A ++
Sbjct: 178 ---ERDLVAWTALIQAYGVNGQLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARKM 234
Query: 257 FERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
+ +P D + T+MI ++ G ++ + E+F+ + D + A++ + + + + A
Sbjct: 235 LDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPDVIACNAMMEAYSSAQMLDHAK 294
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI-----HAHVVKMNM--------- 362
F + +K + ++ +++++A A L++ I H +VV N+
Sbjct: 295 AMFDSIKQKTL----VSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVSHNVMVVAYAHNM 350
Query: 363 -------------ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
E D ++V++ ++ G + +A +F + RN+VS+NS+I+G A
Sbjct: 351 DLAEARRIFYSMDEKDTVTWTAMVAMLAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMAS 410
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
G G A+ M++EG P+ ITF+ +L AC+HVGLVEEG+ +F SM+ + + P E
Sbjct: 411 CGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEGWTHFTSMQGDHGLIPWRE 470
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
HY MVD+LGRAG L A +L+ +M F P G WG+LLG+ +TH ++ L AA+ L++
Sbjct: 471 HYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSCKTHSDVKLGTRAAESLLQF 530
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ S+ PYV+L+++YS +G+ D VR + K + ++K PG S I + +H F+AG S
Sbjct: 531 DDQSSGPYVLLANMYSSVGRVADALAVRNRMKARGVKKQPGVSLIRVDGVLHRFVAGEAS 590
Query: 590 CLDLKEIEVTLQTISKGTKE 609
+EI L + + K+
Sbjct: 591 HPRHQEILSELSRLQELMKK 610
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 183/381 (48%), Gaps = 37/381 (9%)
Query: 1 MADRTSA----SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYE 56
M DRT S+NA+IT +N IF MP R VS+ A+++ + + G +
Sbjct: 78 MFDRTPEHNVISWNALITGYSDNRMIPEAKGVIFDEMPRREEVSWNALLSAYAQAGHVHL 137
Query: 57 AEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
A + MP D V ALI+ + G+ EEA +++ + E+D+VAW +++ Y G
Sbjct: 138 ARSTFERMPR--HDVVAWTALIAVSGQNGQLEEAEVLYDLIPERDLVAWTALIQAYGVNG 195
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMK----------VDCFEDG-----FDLFLSMRR 161
++ E++ ++ MPE+N V+ TAM+ Y + +D D + ++ +
Sbjct: 196 QLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQ 255
Query: 162 GGM------AFNSITLTILFEACGRFFRYREGVQV--HGLVSRFGFDY----DIILGNSI 209
G F+SI + AC Q+ H ++ FD ++ N++
Sbjct: 256 NGYIKDAREMFDSIKNPDVI-ACNAMMEAYSSAQMLDH---AKAMFDSIKQKTLVSWNTM 311
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
+ Y + G +DEA +F + ++ VS N ++ Y HN ++ EA R+F M KD V+WT
Sbjct: 312 VAAYAQAGNLDEAKSIFDSIPHKNVVSHNVMVVAYAHNMDLAEARRIFYSMDEKDTVTWT 371
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
M+ + G L ++ ELF MP ++ V+W ++I+G + A R+ M + +P
Sbjct: 372 AMVAMLAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKP 431
Query: 330 NQLTLSSVLSASAATATLNQG 350
+ +T +L A + + +G
Sbjct: 432 DHITFMGILIACSHVGLVEEG 452
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 38/337 (11%)
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
+ +Y G + A +F + + VSWNSLI+G+ +G + A +F RMP SW
Sbjct: 1 MQVYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWN 60
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR-WFIEMLRKDVR 328
+MITG++ G+L + +F+ PE + ++W A+I+G+ +N EA F EM R++
Sbjct: 61 SMITGYAQSGDLAGATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVIFDEMPRREEV 120
Query: 329 PNQLTLSS---------------------VLSASAATATLNQGSQIHAHVVKMNM--ESD 365
LS+ V++ +A A Q Q+ V ++ E D
Sbjct: 121 SWNALLSAYAQAGHVHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLYDLIPERD 180
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ +L+ Y G + ++ R++ + ERN VS+ +MI ++QNG +A RKM D
Sbjct: 181 LVAWTALIQAYGVNGQLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQA----RKMLD 236
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGS 483
P+Q T S++ A G +++ F S+K P+ AC M++ A
Sbjct: 237 TLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIKN-------PDVIACNAMMEAYSSAQM 289
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
L A + +S+ + W ++ A NLD AK
Sbjct: 290 LDHAKAMFDSIK-QKTLVSWNTMVAAYAQAGNLDEAK 325
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA-EE 59
M ++ + ++ AM+ A++ + + EA E+FA MP RN VS+ ++I G G A
Sbjct: 362 MDEKDTVTWTAMV-AMLAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRY 420
Query: 60 LYV--NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMV-EKDVVAWGS----MVDGY 112
LYV N A+ D + ++ VG EE F +M + ++ W MVD
Sbjct: 421 LYVMRNEGAK-PDHITFMGILIACSHVGLVEEGWTHFTSMQGDHGLIPWREHYCRMVDVL 479
Query: 113 CKKGRVIEAREIFDKMP-EKNVVAWTAMV 140
+ G++ ARE+ + MP +V AW +++
Sbjct: 480 GRAGQLGAARELLETMPFIPDVGAWGSLL 508
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 281/504 (55%), Gaps = 35/504 (6%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F+++ E NV +++ + + F +F M+R G+ ++ T L +AC
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD--EANKVFSMMSKRDAVSWN 238
+H + + G DI + N++I Y R G + +A K+F MS+RD VSWN
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----- 293
S++ G V GE+ +A RLF+ MP +D +SW TM+ G++ + K+ ELF MPE
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 249
Query: 294 ----------------------------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
K+ VTWT II+G+ +EA R +M+
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++ + + S+L+A + L+ G +IH+ + + N+ S+ + N+L+ +Y+KCGN+ A
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+ +F +I ++++VS+N+M+ G +G G+EA+ LF +M+ EG+ P+++TF++VL +CNH
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GL++EG YF SM+ +Y++ P EHY C+VD+LGR G L EAI ++ +M EP +WGA
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA R H +D+AK +L++L+P Y +LS++Y+ +R K K +
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 566 RKSPGCSWIILKDKVHLFLAGRKS 589
K G S + L+D +H F KS
Sbjct: 550 EKPSGASSVELEDGIHEFTVFDKS 573
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 178/372 (47%), Gaps = 17/372 (4%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
RD+V N+++ G +K G +A R+F+ M ++D+++W +M+DGY + + +A E+F+KM
Sbjct: 183 RDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM 242
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
PE+N V+W+ MV GY K E +F M A N +T TI+ +E
Sbjct: 243 PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEAD 300
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK----RDAVSWNSLISGY 244
++ + G +D SI+ G + ++ S++ + +A N+L+ Y
Sbjct: 301 RLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWT 300
G +++A+ +F +P KD VSW TM+ G G+ +++IELF+ M + D VT+
Sbjct: 361 AKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFI 420
Query: 301 AIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
A++ + +E +F M + D+ P ++ L + ++ V
Sbjct: 421 AVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKV---VQT 477
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN---IDERNIVSYNSMISGFAQNGLGEEA 416
M ME +V I +L+ V A + N +D + +Y+ + + +A E
Sbjct: 478 MPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGV 537
Query: 417 LNLFRKMKDEGL 428
++ KMK G+
Sbjct: 538 ADIRSKMKSMGV 549
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 148/304 (48%), Gaps = 40/304 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M++R + S+N+M+ L+ + +A +F MP R+ +S+ M+ G+ R +A EL
Sbjct: 180 MSERDTVSWNSMLGGLVKAG-ELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFEL 238
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM--VEKDVVAWGSMVDGYCKKGRV 118
+ MP R++V + ++ GY K G E A +F+ M K+VV W ++ GY +KG +
Sbjct: 239 FEKMPE--RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EA + D+M VA G+ F++ + + AC
Sbjct: 297 KEADRLVDQM-----VA--------------------------SGLKFDAAAVISILAAC 325
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G+++H ++ R + + N+++ MY + G + +A VF+ + K+D VSWN
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+++ G +G +EA LF RM + D V++ ++ + G +++ I+ F M +
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
Query: 295 DDVT 298
D+
Sbjct: 446 YDLV 449
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 48/304 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+N M+ + +AFE+F MP RN VS++ M+ G+ + G A +
Sbjct: 211 MPQRDLISWNTMLDGYARCR-EMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVM 269
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMV-------------------EKD 101
+ MP ++ V +I+GY + G +EA R+ + MV E
Sbjct: 270 FDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESG 329
Query: 102 VVAWG--------------------SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+++ G +++D Y K G + +A ++F+ +P+K++V+W M+
Sbjct: 330 LLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLH 389
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G ++ +LF MRR G+ + +T + +C EG+ + + Y
Sbjct: 390 GLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV---Y 446
Query: 202 DIILG----NSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYRL 256
D++ ++ + GR+G + EA KV M + + V W +L+ + E++ A +
Sbjct: 447 DLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEV 506
Query: 257 FERM 260
+ +
Sbjct: 507 LDNL 510
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
++ R +D +I+ S ++ +FN + E + ++I N Q +
Sbjct: 41 QIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQ 100
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
AF F EM R + + T +L A + + L +H H+ K+ + SD+ + N+L+
Sbjct: 101 AFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALID 160
Query: 375 LYSKCG--NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
YS+CG V DA ++F + ER+ VS+NSM+ G + G +A LF +M L+
Sbjct: 161 CYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLI 217
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
A LNQ Q+HA +++ N+ D+ I L+S S C A R+F + E N+ NS+I
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLI 89
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN- 463
AQN +A +F +M+ GL + T+ +L AC+ G + +K ++N
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------GQSWLPVVKMMHNH 142
Query: 464 IEP---GPEHYA--CMVDILGRAGSLA--EAIDLINSMTFEPPPGVWGALLGA 509
IE + Y ++D R G L +A+ L M+ E W ++LG
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGG 194
>gi|147833477|emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]
Length = 596
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 289/529 (54%), Gaps = 27/529 (5%)
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y + G + A + F+ + +N+ +W ++ + K CF D LF M + G +S
Sbjct: 5 AYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFN 64
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L +AC ++ H L + + D + +++ +Y LG ++EA+KVF +
Sbjct: 65 LVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVP 124
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG---------------- 274
+++V W +I GY++ E + LF RM F ++ G
Sbjct: 125 LKNSVIWGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKT 184
Query: 275 -----FSS------KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
FSS +G L+ ++ LF + +B V W+AII+GF N + E+ F +ML
Sbjct: 185 FHGLYFSSGYVYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRALESISMFRQML 244
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
V PN +T +S++ A ++ +L QG +H ++++ +E DV S + +Y+KCG +V
Sbjct: 245 ADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIV 304
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
AYR+F I E+N+ S+++MI+GF +GL EALNLF +M+ +PN +TF+SVLSAC+
Sbjct: 305 TAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACS 364
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H G +EEG+ +FKSM Y I P EHYACMVD+LGRAG + EA+ IN+M EP W
Sbjct: 365 HSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAW 424
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
GALLGA R H +LA+ A+ L+ LE D + YV+LS++Y+ +G + R+K K
Sbjct: 425 GALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEK 484
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+ K G + I +K+K++LF + + +IE ++ + +E +
Sbjct: 485 GLLKIVGFTSIEIKEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGY 533
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 166/374 (44%), Gaps = 57/374 (15%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S++ A + F + N S+ ++ + FY+ +L+ M + N + +
Sbjct: 11 SLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVK 70
Query: 82 LKVG-RCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G + A++F ++ +E D ++++ Y + G + EA ++F+++P KN V
Sbjct: 71 ACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVI 130
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W M+ GY+ F+LF MRR G + + L +ACG + +EG HGL
Sbjct: 131 WGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLYF 190
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
G+ Y++ GF+D A +F + RB V W+++I+G+ NG E+
Sbjct: 191 SSGYVYEV------------RGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRALESIS 238
Query: 256 LFERMPGKDF----VSWTTMITGFSSKGNLEK-----------SIEL------------- 287
+F +M V++ +++ SS G+L++ +EL
Sbjct: 239 MFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYA 298
Query: 288 -----------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
F +PEK+ +W+ +I+GF + EA F EM + PN +T S
Sbjct: 299 KCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVS 358
Query: 337 VLSASAATATLNQG 350
VLSA + + + +G
Sbjct: 359 VLSACSHSGRIEEG 372
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 142/323 (43%), Gaps = 62/323 (19%)
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------- 260
I Y +LG + A+K F+ ++ + SWN++++ + N + +LF+RM
Sbjct: 2 IFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVD 61
Query: 261 --------------------------------PGKDFVSWTTMITGFSSKGNLEKSIELF 288
G +V+ ++ ++ G+LE++ ++F
Sbjct: 62 SFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVA-PALMNVYTELGSLEEAHKVF 120
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+P K+ V W +I G++N + F F M R + + ++ A
Sbjct: 121 EEVPLKNSVIWGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGK 180
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+G H + S +Y G + A +F I RB+V ++++I+GFA
Sbjct: 181 EGKTFHG------------LYFSSGYVYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFA 228
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
+NG E++++FR+M + + PN +TF S++ AC+ +G +++G +S+ Y I G
Sbjct: 229 RNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQG----RSVHG-YMIRNGV 283
Query: 469 E----HYACMVDILGRAGSLAEA 487
E +Y +D+ + G + A
Sbjct: 284 ELDVKNYTSFIDMYAKCGCIVTA 306
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 302/566 (53%), Gaps = 44/566 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D ++ Y RV AR++FD +P + V W ++ G + E +
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCD-- 205
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G + ++ TL + A G VH + G + +I++Y + G ++
Sbjct: 206 -GSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVE 264
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------------------- 260
A +F MM K D V++N+LISGY NG + + LF +
Sbjct: 265 SARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHS 324
Query: 261 P-GKDFVSW-----------------TTMITGFSSKGN-LEKSIELFNMMPEKDDVTWTA 301
P G D ++ +T IT + N +E + + F+ MPEK +W A
Sbjct: 325 PFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNA 384
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+ISG+ N E A F +M++ +VRPN +T+SS LSA A L+ G +H + + +
Sbjct: 385 MISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEED 444
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+E +V + +L+ +Y+KCG++ +A RIF +D +N+VS+N+MI+G+ +G G EAL L++
Sbjct: 445 LEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYK 504
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
M D L+P TFLSVL AC+H GLVEEG+ F+SM Y I PG EH CMVD+LGRA
Sbjct: 505 DMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRA 564
Query: 482 GSLAEAIDLINSMTFEP-PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
G L EA +LI+ PGVWGALLGA H + DLAKLA+Q L EL+P+++ YV+L
Sbjct: 565 GQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLL 624
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S+L++ + + VR + K +++ K+PG + I + +K H+F+AG ++ + I L
Sbjct: 625 SNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYL 684
Query: 601 QTISKGTKEFDW-PKHDWSLLGLERD 625
+ ++ E + P+ + +L +E +
Sbjct: 685 EKLTAKMIEAGYRPETEAALYDVEEE 710
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 158/342 (46%), Gaps = 20/342 (5%)
Query: 7 ASYNAMITALIN--NNCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
A + ++T LI+ + C E+ +F M + V+Y A+I+G+ GM + L+
Sbjct: 244 AEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTE 303
Query: 64 M--PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG-----YCKKG 116
+ W +S ALI + G + A+ V K S V +C+
Sbjct: 304 LMTLGLWPNSSTLVALIPVHSPFGH-DLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLN 362
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
+ AR+ FD MPEK + +W AM+ GY + E LF M + + N IT++
Sbjct: 363 DMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLS 422
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
AC + G +H +++ + ++ + ++I MY + G + EA ++F+ M ++ VS
Sbjct: 423 ACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVS 482
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGNLEKSIELFNMMP 292
WN++I+GY +G+ EA +L++ M + ++ +++ S G +E+ ++F M
Sbjct: 483 WNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMT 542
Query: 293 EKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+ + T ++ Q +EAF E + V P
Sbjct: 543 DDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGP 584
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 1 MADRTSASYNAMITALINNNCS--IYEAFEIFATMPMR-NAVSYAAMITGFVRRGMFYEA 57
M ++T S+NAMI+ N + FE + +R N ++ ++ ++ + G
Sbjct: 374 MPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLG 433
Query: 58 EELY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
+ L+ + + ALI Y K G EA RIF M K+VV+W +M+ GY
Sbjct: 434 KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLH 493
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKV----DCFEDGFDLFLSM 159
G+ EA +++ M + +++ +A + E+G+ +F SM
Sbjct: 494 GQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSM 541
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 12 MITALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PA 66
++TALI+ C SI EA IF TM +N VS+ AMI G+ G EA +LY +M
Sbjct: 451 VMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAH 510
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG-----SMVDGYCKKGRVIEA 121
S +++ G EE ++F +M + + G MVD + G++ EA
Sbjct: 511 LLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEA 570
Query: 122 REIFDKMPEKNVVA--WTAMVDGYM 144
E+ + P+ V W A++ M
Sbjct: 571 FELISEFPKSAVGPGVWGALLGACM 595
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/614 (28%), Positives = 325/614 (52%), Gaps = 46/614 (7%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCSN--ALISGYLKVGRCEEAARIFEAMVE-- 99
+++ + + G F E+ L+ M C ++ + +G+ +E R+ +++
Sbjct: 441 LMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLG 500
Query: 100 --KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
+ S++ Y K G V A +FD++ E +VV+W +M++G + +G ++F+
Sbjct: 501 FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFI 560
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
M G+ + TL + A G +HG + F +++ N+++ MY + G
Sbjct: 561 QMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCG 620
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------- 260
++ A +VF M VSW S I+ YV G +A LF+ M
Sbjct: 621 NLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVH 680
Query: 261 ---------PGKDFVSWT-------------TMITGFSSKGNLEKSIELFNMMPEKDDVT 298
G+D S+ +I ++ G++E++ +F+ +P KD V+
Sbjct: 681 ACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVS 740
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W +I G+ N EA F++M +K +P+ +T++ VL A A A L++G +IH H++
Sbjct: 741 WNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHIL 799
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ SD+ + +LV +Y+KCG +V A +F I +++++S+ MI+G+ +G G EA++
Sbjct: 800 RRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAIS 859
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F +M+ G+ P++ +F +L+AC+H GL+ EG+ +F SM+ +EP EHYAC+VD+L
Sbjct: 860 TFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLL 919
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
R G+L++A I SM +P +WG LL R H ++ LA+ A+H+ ELEPD+ YV
Sbjct: 920 ARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYV 979
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
VL+++Y+ K + ++R + + + +++PGCSWI + K ++F+AG K I+V
Sbjct: 980 VLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDV 1039
Query: 599 TLQTISKGTKEFDW 612
L+ ++ + D+
Sbjct: 1040 LLRKLTMQMQNEDY 1053
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 239/515 (46%), Gaps = 79/515 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D L+ Y+ G + +IF+ ++ V W ++ Y K G E+ +F KM
Sbjct: 403 DEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQ 462
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+ VV N T T + + + +E +
Sbjct: 463 KLGVVG-------------------------------NCYTFTCVLKCFAALGKVKECKR 491
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG V + GF + + NS+I Y + G ++ A+ +F +S+ D VSWNS+I+G V NG
Sbjct: 492 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 551
Query: 250 IEEAYRLFERMP---------------------------------------GKDFVSWTT 270
+F +M ++ V T
Sbjct: 552 SGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNT 611
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
++ +S GNL + E+F M + V+WT+ I+ +V Y +A F EM K VRP+
Sbjct: 612 LLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPD 671
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T++S++ A A +++L++G +H++V+K M S++ + N+L+++Y+KCG+V +A +F+
Sbjct: 672 IYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFS 731
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
I ++IVS+N+MI G++QN L EAL LF M+ + P+ IT VL AC + +++
Sbjct: 732 KIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDK 790
Query: 451 GF-IYFKSMKTLYNIEPGPEHYAC-MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
G I+ ++ Y + H AC +VD+ + G L A L+ M + W ++
Sbjct: 791 GREIHGHILRRGYFSDL---HVACALVDMYAKCGLLVLA-QLLFDMIPKKDLISWTVMIA 846
Query: 509 AGRTH--LNLDLAKLAAQHLMELEPDSATPYVVLS 541
H N ++ + +EPD ++ V+L+
Sbjct: 847 GYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILN 881
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 139/317 (43%), Gaps = 39/317 (12%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C +G +VH ++ G D LG ++ MY G + + K+F +
Sbjct: 375 VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMP-------------------------------- 261
WN L+S Y G E+ LF++M
Sbjct: 435 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494
Query: 262 -------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
G + ++I + G +E + LF+ + E D V+W ++I+G V N
Sbjct: 495 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 554
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
FI+ML V + TL SVL A A L+ G +H VK +V N+L+
Sbjct: 555 GLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 614
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSKCGN+ A +F + + IVS+ S I+ + + GL +A+ LF +M+ +G+ P+ T
Sbjct: 615 MYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 674
Query: 435 FLSVLSACNHVGLVEEG 451
S++ AC +++G
Sbjct: 675 VTSIVHACACSSSLDKG 691
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 164/351 (46%), Gaps = 21/351 (5%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-------WRDSVCSNALI 78
A E+F M VS+ + I +VR G++ +A L+ M ++ S+
Sbjct: 625 ATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACAC 684
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
S L GR + + + + + ++ ++++ Y K G V EAR +F K+P K++V+W
Sbjct: 685 SSSLDKGR-DVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNT 743
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY + + +LFL M++ + IT+ + AC +G ++HG + R G
Sbjct: 744 MIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRG 802
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ D+ + +++ MY + G + A +F M+ K+D +SW +I+GY +G EA F
Sbjct: 803 YFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFN 862
Query: 259 --RMPG--KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNN 309
R+ G D S++ ++ S G L + + FN M + V + ++
Sbjct: 863 EMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARM 922
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+A++ FIE + ++P+ +LS + ++ H+ ++
Sbjct: 923 GNLSKAYK-FIESM--PIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFEL 970
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 316 FRWFIEMLRKDVRPNQLTLSS---VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
R IE+L K + +L L+S VL A +L G ++H+ ++ + D ++ L
Sbjct: 352 LRNAIELLTKS-KSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKL 410
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V +Y CG++V +IF I + +N ++S +A+ G E+++LF+KM+ G+V N
Sbjct: 411 VFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNC 470
Query: 433 ITFLSVLSACNHVGLVEE 450
TF VL +G V+E
Sbjct: 471 YTFTCVLKCFAALGKVKE 488
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 308/581 (53%), Gaps = 37/581 (6%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGR 86
+F M RN VS+ ++I G+ +RG + EA L+ M +SV +IS K+
Sbjct: 196 VFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQD 255
Query: 87 CEEAAR----IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ + I E +E + + ++VD Y K G + +AR+IFD+ +KN+V + ++
Sbjct: 256 LQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSN 315
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
Y++ + + M + G + IT+ AC G HG V R G +
Sbjct: 316 YVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGW 375
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ N+II MY + G + A +VF M + VSWNSLI+G+V NG++E A+++F MP
Sbjct: 376 DNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPD 435
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
D VSW TMI + +++IELF +M
Sbjct: 436 SDLVSWNTMIGALVQESMFKEAIELFRVMQS----------------------------- 466
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ + +++T+ V SA L+ IH ++ K ++ D+ + +LV ++++CG+
Sbjct: 467 --EGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDP 524
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A ++F + +R++ ++ + I A G G A+ LF +M +G+ P+ + F+++L+A
Sbjct: 525 QSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTAL 584
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H GLVE+G+ F+SMK +Y I P HY CMVD+LGRAG L+EA+ LINSM EP +
Sbjct: 585 SHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVI 644
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WG+LL A R H N+D+A AA+ + EL+P+ +V+LS++Y+ G+ D +VR+ K
Sbjct: 645 WGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKE 704
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K K PG S I + K+ F G +S ++ IE L+ I
Sbjct: 705 KGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEI 745
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 193/435 (44%), Gaps = 57/435 (13%)
Query: 12 MITALINN--NC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---- 64
M+ AL++ C +I +A +IF +N V Y +++ +VR+G+ E + M
Sbjct: 277 MVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHG 336
Query: 65 --PAR---------------------------------WRDSVCSNALISGYLKVGRCEE 89
P R W D+VC NA+I+ Y+K G+ E
Sbjct: 337 PRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGW-DNVC-NAIINMYMKCGKQEM 394
Query: 90 AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
A R+F+ M+ K V+W S++ G+ + G + A +IF MP+ ++V+W M+ ++ F
Sbjct: 395 ACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMF 454
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
++ +LF M+ G+ + +T+ + ACG +HG + + +D+ LG ++
Sbjct: 455 KEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTAL 514
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DF 265
+ M+ R G A +VF+ M KRD +W + I G A LF+ M + D
Sbjct: 515 VDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDG 574
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN-----EQYEEAFRWFI 320
V + ++T S G +E+ +F M + + A+ G + + EA
Sbjct: 575 VVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLIN 634
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M + PN + S+L+A ++ + + +++ E I L ++Y+ G
Sbjct: 635 SM---QMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPER-TGIHVLLSNIYASAG 690
Query: 381 NVVDAYRIFTNIDER 395
D ++ ++ E+
Sbjct: 691 RWDDVAKVRLHLKEK 705
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 139/316 (43%), Gaps = 62/316 (19%)
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
+++++ G+ +F + G ++ T + AC + EG QVHG +
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ GF+ RD NSLI Y GEI+ R
Sbjct: 167 KMGFE-------------------------------RDMFVENSLIHFYGECGEIDCMRR 195
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+F++M E++ V+WT++I G+ Y+EA
Sbjct: 196 VFDKMS-------------------------------ERNVVSWTSLIGGYAKRGCYKEA 224
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F EM+ +RPN +T+ V+SA A L G Q+ + ++ +E + + N+LV +
Sbjct: 225 VSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDM 284
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y KCG + A +IF ++N+V YN+++S + + GL E L + +M G P++IT
Sbjct: 285 YMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITM 344
Query: 436 LSVLSACNHVGLVEEG 451
LS +SAC+ + V G
Sbjct: 345 LSAVSACSELDDVSCG 360
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 11/273 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M ++T S+N++I + N + A++IF+ MP + VS+ MI V+ MF EA EL
Sbjct: 402 MLNKTRVSWNSLIAGFVRNG-DMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIEL 460
Query: 61 YVNMPAR--WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV---VAWGS-MVDGYCK 114
+ M + D V + S +G + A I + +KD+ + G+ +VD + +
Sbjct: 461 FRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFAR 520
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG-FDLFLSMRRGGMAFNSITLTI 173
G A ++F+KM +++V AWTA + G M ++ G +LF M + G+ + +
Sbjct: 521 CGDPQSAMQVFNKMVKRDVSAWTAAI-GAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVA 579
Query: 174 LFEACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEA-NKVFSMMSK 231
L A +G + + +G + ++ + GR G + EA + + SM +
Sbjct: 580 LLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQME 639
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
+ V W SL++ + ++ A ER+ D
Sbjct: 640 PNDVIWGSLLAACRVHKNVDIAAYAAERISELD 672
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 329 PNQLTL-------SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
PNQ L SS + T+ + Q+H+ + K + +L+S ++ G
Sbjct: 21 PNQNELKILTKHRSSPTGSFKKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGT 80
Query: 382 ------VVDAYRIFTNIDERNIVS----YNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
A +F I++ I+ ++S+I GF+ GLG +A+ +FR++ G VP+
Sbjct: 81 FESLEYAQKALELF--IEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPD 138
Query: 432 QITFLSVLSACNHVGLVEEGF 452
TF VLSAC + EGF
Sbjct: 139 NFTFPFVLSACTKSAALTEGF 159
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 200/658 (30%), Positives = 326/658 (49%), Gaps = 74/658 (11%)
Query: 14 TALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--------- 64
TA NNC + +F TM RN V++ MI+ +V+ EA +++ M
Sbjct: 161 TAYDFNNCDLVR--RVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTP 218
Query: 65 -------PARWR--DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
PA WR D +N L +K+G + D S + Y +
Sbjct: 219 VSFVNVFPAVWRMSDYDNANVLYGLVVKLG----------SDFVDDFFVVSSAIFMYAEL 268
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS-MRRGGMAFNSITLTIL 174
G V AREIFD E+N W M+ GY++ +C + DLF+ M + +T
Sbjct: 269 GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSA 328
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
A + G Q+H + + +++ N+II MY R G + + KVFS M +RD
Sbjct: 329 LTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDV 388
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG-------------------- 274
V+WN+++S +V NG +E L M + F+ + +T
Sbjct: 389 VTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAY 448
Query: 275 ------------------FSSKGNLEKSIELF--NMMPEKDDVTWTAIISGFVNNEQYEE 314
++ G + + +LF N ++D+ TW A+I+G+ N EE
Sbjct: 449 LIRHGIQFEGMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEE 508
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
F F +M+ ++VRPN +TL+S+L A T+ G QIH ++ + +V + +L+
Sbjct: 509 GFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLD 568
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSK G + A +F E+N V+Y +MIS + Q+G+GE AL+LF M G+ P+ +T
Sbjct: 569 MYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVT 628
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F+++LSAC++ GLV+EG F+SM+ Y I+P EHY C+ D+LGR G + EA + + +
Sbjct: 629 FVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGL 688
Query: 495 TFEPPP-GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP--YVVLSDLYSVIGKKR 551
E G+WG+LLGA R H +L K+ A L+E+E S+ +V+LS++Y+ G
Sbjct: 689 GEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWD 748
Query: 552 DGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+ +RVR + + K + K GCSW+ + V+ F++ EI L+ ++ K+
Sbjct: 749 NVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKD 806
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/526 (24%), Positives = 235/526 (44%), Gaps = 89/526 (16%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMA 165
S + C++G +A +FD +P V W ++ G++ + D + MR
Sbjct: 42 SRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPK 101
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR-------LGF 218
F+S T + +AC + + G +H V R F I+ NS++ MY LG
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGT 161
Query: 219 ------MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------P----- 261
D +VF M KR+ V+WN++IS YV + EA+++F M P
Sbjct: 162 AYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221
Query: 262 --------------------------GKDFVS----WTTMITGFSSKGNLEKSIELFNMM 291
G DFV ++ I ++ G ++ + E+F+
Sbjct: 222 VNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCC 281
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQG 350
E++ W +I G+V N EA F++++ + + +T S L+A + L G
Sbjct: 282 LERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELG 341
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q+HA+++K + V I N+++ +YS+CG++ ++++F+N+ ER++V++N+M+S F QN
Sbjct: 342 RQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQN 401
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----------HVGLVEEGFIYFKSMK 459
GL +E L L M+ +G + + +T ++LS + H L+ G I F+ M
Sbjct: 402 GLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHG-IQFEGMD 460
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT-FEPPPGVWGALLGAGRTHLNLDL 518
+ ++D+ ++G + A L + ++ W A++ AG T L
Sbjct: 461 SY------------LIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMI-AGYTQNGLSE 507
Query: 519 AKLAAQHLM---ELEPDSATPYVVLSDLYSV----IGKKRDGNRVR 557
A M + P++ T +L + +GK+ G +R
Sbjct: 508 EGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIR 553
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 184/446 (41%), Gaps = 92/446 (20%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMP-----MRNAVSYAAMITGFVRRGMFYEA 57
+R + +N MI + NNC I EA ++F + + + V++ + +T +
Sbjct: 283 ERNTEVWNTMIGGYVQNNCPI-EAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELG 341
Query: 58 EEL--YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
+L Y+ + V NA+I Y + G + ++F M+E+DVV W +MV + +
Sbjct: 342 RQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQN 401
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G +D ++G L +M++ G +S+TLT L
Sbjct: 402 G-----------------------LD--------DEGLMLVFAMQKQGFMVDSVTLTALL 430
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS--KRD 233
G Q H + R G ++ + + +I MY + G + A ++F S RD
Sbjct: 431 SLASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQLFEKNSDYDRD 489
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM----------------PG--------------- 262
+WN++I+GY NG EE + +F +M P
Sbjct: 490 EATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHG 549
Query: 263 --------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
++ T ++ +S G + + +F EK+ VT+T +IS + + E
Sbjct: 550 FAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGER 609
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS--- 371
A F ML ++P+ +T ++LSA + +++G +I +ME + IQ S
Sbjct: 610 ALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIF-----QSMEREYKIQPSAEH 664
Query: 372 ---LVSLYSKCGNVVDAYRIFTNIDE 394
+ + + G VV+AY + E
Sbjct: 665 YCCVADMLGRVGRVVEAYEFVKGLGE 690
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 336/635 (52%), Gaps = 28/635 (4%)
Query: 12 MITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------- 64
+I + N NC +A + ++P S++++I + +F ++ ++ M
Sbjct: 56 LIASYSNYNC-FNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP 114
Query: 65 -----PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
P ++ VC A +S + KVG+ + + D GSM Y + GR+
Sbjct: 115 DSHVLPNLFK--VC--AELSAF-KVGKQIHCVSCVSGL-DMDAFVQGSMFHMYMRCGRMG 168
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+AR++FD+M +K+VV +A++ Y + C E+ + M G+ N ++ +
Sbjct: 169 DARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFN 228
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK----RDAV 235
R ++E V + + GF D + +S++ G ++ + + K +D
Sbjct: 229 RSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKC 288
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK- 294
+++I Y +G + LF + + ITG S G ++K++E+F + E+
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348
Query: 295 ---DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ V+WT+II+G N + EA F EM V+PN +T+ S+L A A L G
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGR 408
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
H V++++ +V + ++L+ +Y+KCG + + +F + +N+V +NS+++GF+ +G
Sbjct: 409 STHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHG 468
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
+E +++F + L P+ I+F S+LSAC VGL +EG+ YFK M Y I+P EHY
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEP 531
+CMV++LGRAG L EA DLI M FEP VWGALL + R N+DLA++AA+ L LEP
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEP 588
Query: 532 DSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCL 591
++ YV+LS++Y+ G + + +R K + ++K+PGCSWI +K++V+ LAG KS
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHP 648
Query: 592 DLKEIEVTLQTISKGT-KEFDWPKHDWSLLGLERD 625
+ +I + ISK K P D++L +E
Sbjct: 649 QIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQ 683
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 172/400 (43%), Gaps = 70/400 (17%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
ARI ++ + D ++ Y +A + +P+ + ++++++ K F
Sbjct: 39 ARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFT 98
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
+F M G+ +S L LF+ C ++ G Q+H + G D D + S+
Sbjct: 99 QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMF 158
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFV 266
MY R G M +A KVF MS +D V+ ++L+ Y G +EE R+ M + V
Sbjct: 159 HMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIV 218
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
SW +++GF+ G ++EA F ++
Sbjct: 219 SWNGILSGFNRSG-------------------------------YHKEAVVMFQKIHHLG 247
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
P+Q+T+SSVL + + LN G IH +V+K + D + ++++ +Y K G+V
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII 307
Query: 387 RIFTNID-----------------------------------ERNIVSYNSMISGFAQNG 411
+F + E N+VS+ S+I+G AQNG
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
EAL LFR+M+ G+ PN +T S+L AC ++ + G
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG 407
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%)
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
+Q HA ++K ++D I L++ YS DA + +I + I S++S+I +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
L +++ +F +M GL+P+ ++ C
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC 126
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/478 (36%), Positives = 268/478 (56%), Gaps = 41/478 (8%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ C + ++G +H + F+ D++L N I+ MY + G ++EA +F M +D
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSWTTMITG------------- 274
VSW LISGY +G+ EA LF +M P + +S +G
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230
Query: 275 FSSK--------------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
FS K ++ ++ +FN + K+ V+W A+I+G + E
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
R F +MLR+ P T SSVL A A++ +L QG +HAHV+K + I N+L+
Sbjct: 291 VMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 349
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+K G++ DA ++F + +++IVS+NS+ISG+AQ+GLG EAL LF +M + PN+IT
Sbjct: 350 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 409
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
FLSVL+AC+H GL++EG YF+ MK + IE H+ +VD+LGRAG L EA I M
Sbjct: 410 FLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEM 468
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
+P VWGALLGA R H N+DL AA+ + EL+P + P+V+LS++Y+ G+ D
Sbjct: 469 PIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAA 528
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+VR K ++K P CSW+ ++++VH+F+A S +EI+ + IS KE +
Sbjct: 529 KVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGY 586
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 173/342 (50%), Gaps = 39/342 (11%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
LK GR A I + E D+V +++ Y K G + EA+++FDKMP K++V+WT ++
Sbjct: 121 LKQGRAIHA-HIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLIS 179
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY + + LF M G N TL+ L +A G G Q+H ++G+D
Sbjct: 180 GYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDM 239
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++ +G+S++ MY R M EA +F+ ++ ++ VSWN+LI+G+ GE E RLF +M
Sbjct: 240 NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQML 299
Query: 262 GKDFV---------------------SWT-----------------TMITGFSSKGNLEK 283
+ F W T+I ++ G+++
Sbjct: 300 RQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKD 359
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ ++F + ++D V+W +IISG+ + EA + F +ML+ V+PN++T SVL+A +
Sbjct: 360 AKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSH 419
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ L++G + K +E+ V+ ++V L + G + +A
Sbjct: 420 SGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEA 461
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 178/395 (45%), Gaps = 29/395 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNAL-ISG 80
S+ EA ++F MP ++ VS+ +I+G+ + G EA L+ P N +S
Sbjct: 155 SLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALF---PKMLHLGFQPNEFTLSS 211
Query: 81 YLK---VGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
LK G + R A K +V S++D Y + + EA+ IF+ + KN
Sbjct: 212 LLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKN 271
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VV+W A++ G+ + E LF M R G T + + AC +G VH
Sbjct: 272 VVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHA 330
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V + G +GN++I MY + G + +A KVF + K+D VSWNS+ISGY +G E
Sbjct: 331 HVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE 390
Query: 253 AYRLFERM------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAI 302
A +LFE+M P + +++ +++T S G L++ F +M E +
Sbjct: 391 ALQLFEQMLKAKVQPNE--ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTV 448
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
+ + EA ++ EM ++P ++L A ++ G + +++
Sbjct: 449 VDLLGRAGRLNEANKFIEEM---PIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELD- 504
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
D L ++Y+ G + DA ++ + E +
Sbjct: 505 PHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV 539
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 18/224 (8%)
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+ P + S +L+ L QG IHAH+ E D+ + N ++++Y+KCG++ +A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA----- 441
+F + +++VS+ +ISG++Q+G EAL LF KM G PN+ T S+L A
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 442 CNHVGLVEEGFIYFKSMKTLY--NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
+H G F S+K Y N+ G + ++D+ R + EA + NS+ +
Sbjct: 221 SDHHGRQLHAF----SLKYGYDMNVHVG----SSLLDMYARWAHMREAKVIFNSLAAKNV 272
Query: 500 PGVWGALL-GAGRTHLNLDLAKLAAQHLME-LEPDSATPYVVLS 541
W AL+ G R + +L Q L + EP T VL+
Sbjct: 273 VS-WNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLA 315
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/493 (33%), Positives = 273/493 (55%), Gaps = 43/493 (8%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD++P+ N+ W +M GY + + + + +F M
Sbjct: 4 ARQLFDQIPDPNIALWNSMFRGYAQSESYRE---IFCEM--------------------- 39
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F+ +++ S+I Y + A ++F + +RD V WN +
Sbjct: 40 ------------------FERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIM 81
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+SGY+ G++ EA +LF MP +D + W T++ G+++ GN+E LF MPE++ +W
Sbjct: 82 VSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWN 141
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
A+I G+ +N + E F ML + DV PN TL +VLSA A L+ G +H +
Sbjct: 142 ALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAES 201
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
++ +V + N+L+ +Y+KCG + +A +F +D ++++S+N++I G A + G +ALNL
Sbjct: 202 SGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNL 261
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F +MK+ G P+ ITF+ +L AC H+GLVE+GF YF+SM Y I P EHY CMVD+L
Sbjct: 262 FFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLA 321
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L +A+ + M E +W LLGA R + N++LA+LA Q L+ELEP + YV+
Sbjct: 322 RAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVM 381
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
LS++Y G+ D R+++ + +K PGCS I + D V F + + ++EI
Sbjct: 382 LSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGV 441
Query: 600 LQTISKGTKEFDW 612
L+ + K + F +
Sbjct: 442 LRGLVKVLRSFGY 454
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 158/358 (44%), Gaps = 54/358 (15%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRC 87
EIF M RN V++ +MI G++ A L+ P R D V N ++SGY++ G
Sbjct: 34 EIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPER--DVVLWNIMVSGYIEGGDM 91
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
EA ++F M +DV+ W +++ GY G V +F++MPE+N+ +W A++ GY
Sbjct: 92 VEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNG 151
Query: 148 CFEDGFDLFLSMRR----GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
F F++ S +R + N TL + AC R G VH G ++
Sbjct: 152 LF---FEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNV 208
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY------------------- 244
+GN+++ MY + G ++ A VF M +D +SWN+LI G
Sbjct: 209 YVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNA 268
Query: 245 ----------------VHNGEIEEAYRLFERMPGKDFV-----SWTTMITGFSSKGNLEK 283
H G +E+ + F+ M + + M+ + G LE+
Sbjct: 269 GQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQ 328
Query: 284 SIELFNMMP-EKDDVTWTAIISG---FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
++ MP E D V W ++ + N E E A + IE+ K+ N + LS++
Sbjct: 329 AMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKN-PANYVMLSNI 385
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 183/475 (38%), Gaps = 130/475 (27%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N++ GY + E IF M E++VVAW SM++GY ++ AR +FD PE++VV
Sbjct: 20 NSMFRGY---AQSESYREIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVV 76
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W MV GY++ + LF H +
Sbjct: 77 LWNIMVSGYIEGGDMVEARKLF----------------------------------HEMP 102
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+R D++ N+++ Y G ++ +F M +R+ SWN+LI GY HNG E
Sbjct: 103 NR-----DVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVL 157
Query: 255 RLFERM------PGKDFVSWTTMITGFSS----------------------KGN------ 280
F+RM P D T++T S+ KGN
Sbjct: 158 GSFKRMLSESDVPPND----ATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNA 213
Query: 281 ----------LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+E +I +F M KD ++W +I G + + +A F +M +P+
Sbjct: 214 LMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPD 273
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+T +L A + G ++ ++ D Y I
Sbjct: 274 GITFIGILCACTHMGLVEDG-------------------------FAYFQSMADDYLIMP 308
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
I+ Y M+ A+ G E+A+ RKM E + + + +L AC VE
Sbjct: 309 QIEH-----YGCMVDMLARAGRLEQAMAFVRKMPVEA---DGVIWAGLLGACRIYKNVEL 360
Query: 451 GFIYFKSMKTLYNIEP-GPEHYACMVDILGRAGSLAEAIDLINSMT---FEPPPG 501
+ +++ L +EP P +Y + +I G AG + L +M F+ PG
Sbjct: 361 AEL---ALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPG 412
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/640 (28%), Positives = 320/640 (50%), Gaps = 77/640 (12%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVE--- 99
A+I + + G A L+ + D+V N++IS ++ G+C EA +F M E
Sbjct: 185 ALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGV 244
Query: 100 ------------------------------------KDVVAWGSMVDGYCKKGRVIEARE 123
DV +++ Y K GR+ +A
Sbjct: 245 ASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAER 304
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F M ++ V+W ++ G ++ + + D + F M+ + +++ L A GR
Sbjct: 305 VFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGN 364
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G +VH R G D ++ +GN++I MY + + F M ++D +SW ++I+G
Sbjct: 365 LLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAG 424
Query: 244 YVHNGEIEEAYRLFERMPGK--------------------------------------DF 265
Y N EA LF ++ K D
Sbjct: 425 YAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADI 484
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ ++ + G+ + + F + KD V+WT++I+ V+N EA F + +
Sbjct: 485 MLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQT 544
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+++P+ + + S LSA+A ++L +G +IH +++ + I +SLV +Y+ CG V ++
Sbjct: 545 NIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENS 604
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F ++ +R+++ + SMI+ +G G EA+ LF+KM DE ++P+ ITFL++L AC+H
Sbjct: 605 RKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHS 664
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GL+ EG +F+ MK Y +EP PEHYACMVD+L R+ SL EA + SM +P VW A
Sbjct: 665 GLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCA 724
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA H N +L +LAA+ L++ + ++ Y ++S++++ G+ D VR++ K +
Sbjct: 725 LLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGL 784
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
+K+PGCSWI + +K+H F+A KS +I + L +K
Sbjct: 785 KKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTK 824
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 200/383 (52%), Gaps = 43/383 (11%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G + +A ++FD+M E+ + W AM+ ++ + + +L+ MR G+A ++ T
Sbjct: 89 YEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTF 148
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS--MM 229
+ +ACG R G ++HG+ + GF + + N++I MYG+ G + A +F MM
Sbjct: 149 PSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMM 208
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT-------------------- 269
K D VSWNS+IS +V G+ EA LF RM S T
Sbjct: 209 EKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGM 268
Query: 270 -------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+I ++ G +E + +F M +D V+W ++SG V NE
Sbjct: 269 GIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNE 328
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
Y +A +F +M +P+Q+++ ++++AS + L G ++HA+ ++ ++S++ I N
Sbjct: 329 LYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGN 388
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+ +Y+KC V F + E++++S+ ++I+G+AQN EA+NLFRK++ +G+
Sbjct: 389 TLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDV 448
Query: 431 NQITFLSVLSACNHVGLVEEGFI 453
+ + SVL AC+ GL FI
Sbjct: 449 DPMMIGSVLRACS--GLKSRNFI 469
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 147/316 (46%), Gaps = 43/316 (13%)
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
++L + C +G Q+H + + L ++ MY + G + +A KVF M++
Sbjct: 50 SLLLDLCVAVKALPQGQQLHARLLKSHLS--AFLATKLLHMYEKCGSLKDAVKVFDEMTE 107
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------------ 261
R +WN+++ +V +G+ EA L++ M
Sbjct: 108 RTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167
Query: 262 ---------GKDFVSWTTMITGFSSKGNLEKSIELFN--MMPEKDDVTWTAIISGFVNNE 310
G+ +I + G+L + LF+ MM ++D V+W +IIS V
Sbjct: 168 HGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEG 227
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+ EA F M V N T + L + + G IH +K N +DV + N
Sbjct: 228 KCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVAN 287
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+++Y+KCG + DA R+F ++ R+ VS+N+++SG QN L +ALN FR M++ P
Sbjct: 288 ALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKP 347
Query: 431 NQITFLSVLSACNHVG 446
+Q++ L++++A G
Sbjct: 348 DQVSVLNLIAASGRSG 363
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 3/195 (1%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T ++ + G+L+ ++++F+ M E+ TW A++ FV++ +Y EA + EM V
Sbjct: 83 TKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVA 142
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ T SVL A A G++IH VK V + N+L+++Y KCG++ A +
Sbjct: 143 IDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVL 202
Query: 389 FTNI--DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
F I ++ + VS+NS+IS G EAL+LFR+M++ G+ N TF++ L
Sbjct: 203 FDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPS 262
Query: 447 LVEEGF-IYFKSMKT 460
V+ G I+ ++K+
Sbjct: 263 FVKLGMGIHGAALKS 277
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S +L A L QG Q+HA ++K ++ + ++ + L+ +Y KCG++ DA ++F + E
Sbjct: 50 SLLLDLCVAVKALPQGQQLHARLLKSHLSAFLATK--LLHMYEKCGSLKDAVKVFDEMTE 107
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-I 453
R I ++N+M+ F +G EA+ L+++M+ G+ + TF SVL AC +G G I
Sbjct: 108 RTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167
Query: 454 YFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGV-WGALLGAG 510
+ ++K + G + C ++ + G+ G L A L + + E V W +++ A
Sbjct: 168 HGVAVKCGF----GEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAH 223
Query: 511 RT 512
T
Sbjct: 224 VT 225
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/628 (29%), Positives = 320/628 (50%), Gaps = 48/628 (7%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCE 88
IF M R+ +S+ ++ + + G E+ ++ ++ R+ D V S + + +G +
Sbjct: 307 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIF-SLMRRFHDEVNSTTVSTLLSVLGHVD 365
Query: 89 EA--ARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
R +V K V +++ Y GR +EA +F +MP K++++W +++
Sbjct: 366 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 425
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
++ D L SM G + N +T T AC + +G +HGLV G Y
Sbjct: 426 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 485
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM- 260
+ I+GN++++MYG++G M E+ +V M +RD V+WN+LI GY + + ++A F+ M
Sbjct: 486 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 545
Query: 261 --------------------PG-------------------KDFVSWTTMITGFSSKGNL 281
PG D ++IT ++ G+L
Sbjct: 546 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 605
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
S +LFN + ++ +TW A+++ ++ EE + +M V +Q + S LSA+
Sbjct: 606 SSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAA 665
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
A A L +G Q+H VK+ E D I N+ +YSKCG + + ++ R++ S+N
Sbjct: 666 AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 725
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+IS ++G EE F +M + G+ P +TF+S+L+AC+H GLV++G Y+ +
Sbjct: 726 ILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD 785
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
+ +EP EH C++D+LGR+G LAEA I+ M +P VW +LL + + H NLD +
Sbjct: 786 FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 845
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA++L +LEP+ + YV+ S++++ G+ D VR + K I+K CSW+ LKDKV
Sbjct: 846 AAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVS 905
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKE 609
F G ++ EI L+ I K KE
Sbjct: 906 SFGIGDRTHPQTMEIYAKLEDIKKLIKE 933
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 162/624 (25%), Positives = 274/624 (43%), Gaps = 145/624 (23%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARW-------- 68
+ A +F MP+RN VS+ M++G VR G++ E E + M P+ +
Sbjct: 123 VKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTA 182
Query: 69 ------------------------RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA 104
D S A++ Y G + ++FE M +++VV+
Sbjct: 183 CGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS 242
Query: 105 WGSMVDGYCKKGRVIE-------------------------------------------- 120
W S++ GY KG E
Sbjct: 243 WTSLMVGYSDKGEPEEVIDIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD 302
Query: 121 -AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
A IFD+M E++ ++W ++ Y + E+ F +F MRR NS T++ L G
Sbjct: 303 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 362
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
+ G +HGLV + GFD + + N+++ MY G EAN VF M +D +SWNS
Sbjct: 363 HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNS 422
Query: 240 LISGYVHNGEIEEAYRLFERM--PGK--DFVSWTT------------------------- 270
L++ +V++G +A L M GK ++V++T+
Sbjct: 423 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 482
Query: 271 ----------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
+++ + G + +S + MP +D V W A+I G+ +E ++A F
Sbjct: 483 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 542
Query: 321 EMLRKDVRPNQLTLSSVLSASAATAT-LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
M + V N +T+ SVLSA L +G +HA++V ESD ++NSL+++Y+KC
Sbjct: 543 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 602
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G++ + +F +D RNI+++N+M++ A +G GEE L L KM+ G+ +Q +F L
Sbjct: 603 GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGL 662
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEH----YACMVDILGRAGSLAEAIDLINSMT 495
SA + ++EEG + + L ++ G EH + D+ + G + E + ++
Sbjct: 663 SAAAKLAVLEEG----QQLHGL-AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML---- 713
Query: 496 FEPPPGV------WGALLGAGRTH 513
PP V W L+ A H
Sbjct: 714 ---PPSVNRSLPSWNILISALGRH 734
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 238/477 (49%), Gaps = 28/477 (5%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A + +V V+ ++++ Y K GRV AR +FD MP +N V+W M+ G ++V +
Sbjct: 96 ALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYL 155
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFR-YREGVQVHGLVSRFGFDYDIILGNSI 209
+G + F M G+ +S + L ACGR +REGVQVHG V++ G D+ + +I
Sbjct: 156 EGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAI 215
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-ERMPGKDFVSW 268
+ +YG G + + KVF M R+ VSW SL+ GY GE EE ++ + G+ +
Sbjct: 216 LHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQIIGQ 275
Query: 269 T-------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
++I+ S GN++ + +F+ M E+D ++W +I + + N EE+
Sbjct: 276 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 335
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
FR F M R N T+S++LS G IH VVKM +S V + N+L+ +
Sbjct: 336 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 395
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y+ G V+A +F + ++++S+NS+++ F +G +AL L M G N +TF
Sbjct: 396 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 455
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKT---LYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
S L+AC E+G I + YN G +V + G+ G ++E+ ++
Sbjct: 456 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG----NALVSMYGKIGEMSESRRVLL 511
Query: 493 SMTFEPPPGV--WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
M P V W AL+G + D A LAA M +E S+ V+S L + +
Sbjct: 512 QM---PRRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSACL 564
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 132/301 (43%), Gaps = 68/301 (22%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G VH L + ++ N++I MY + G + A +F +M R+ VSWN+++SG V
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 247 NGEIEEAYRLFERM-----PGKDFV--SWTT-------------MITGFSSKGNLEKSI- 285
G E F +M FV S T + GF +K L +
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210
Query: 286 -------------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
++F MP+++ V+WT+++ G+ + + EE D
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI---------D 261
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+ ++ + G QI VVK +ES ++++NSL+S+ GNV A
Sbjct: 262 IYKDE----------------SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN 305
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF---RKMKDEGLVPNQITFLSVLSACN 443
IF + ER+ +S+NS+ + +AQNG EE+ +F R+ DE T LSVL +
Sbjct: 306 YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD 365
Query: 444 H 444
H
Sbjct: 366 H 366
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G +HA VK + V N+L+++Y+K G V A +F + RN VS+N+M+SG +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
GL E + FRKM D G+ P+ S+++AC G
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG 187
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/643 (29%), Positives = 332/643 (51%), Gaps = 49/643 (7%)
Query: 20 NCSIYE-AFEIFATMPMRNAVS-YAAMITGFVRRGMFYEAEELY---VNMPARWRDSVCS 74
+C +Y+ A +F M +S + ++ G+ + M+ EA EL+ ++ P DS
Sbjct: 50 SCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTY 109
Query: 75 NALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
+++ + + I +V+ D+V S+V Y K +A +F++MPE
Sbjct: 110 PSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPE 169
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K+V W ++ Y + F++ + F MRR G NS+T+T +C R G+++
Sbjct: 170 KDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEI 229
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + GF D + ++++ MYG+ G ++ A +VF M K+ V+WNS+ISGY G+
Sbjct: 230 HEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDS 289
Query: 251 EEAYRLFERM------PGKDFVSWTTMITGFSSK-------------------------- 278
+LF+RM P +S M+ S++
Sbjct: 290 ISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSL 349
Query: 279 -------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
G +E + +F ++P+ V+W +ISG+V + EA F EM + V P+
Sbjct: 350 MDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDA 409
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+T +SVL+A + A L +G +IH +++ ++++ + +L+ +Y+KCG V +A+ +F
Sbjct: 410 ITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKC 469
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ +R++VS+ SMI+ + +G AL LF +M + P+++TFL++LSAC H GLV+EG
Sbjct: 470 LPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEG 529
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI-NSMTFEPPPGVWGALLGAG 510
YF M +Y I P EHY+C++D+LGRAG L EA +++ + + L A
Sbjct: 530 CYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSAC 589
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H N+DL A+ L++ +PD ++ Y++LS++Y+ K + VR K K ++K+PG
Sbjct: 590 RLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPG 649
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWP 613
CSWI + K+ F S L L+ + L +S ++ P
Sbjct: 650 CSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDESKP 692
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 237/495 (47%), Gaps = 61/495 (12%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLF 156
++ D+ ++++ Y A+ +FD M + W ++ GY K + + +LF
Sbjct: 34 LQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELF 93
Query: 157 LSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
+ + +S T + +ACG ++Y G +H + + G DI++G+S++ MY +
Sbjct: 94 EKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAK 153
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTM 271
++A +F+ M ++D WN++IS Y +G +EA F M F V+ TT
Sbjct: 154 CNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTA 213
Query: 272 ITG-----------------------------------FSSKGNLEKSIELFNMMPEKDD 296
I+ + G+LE +IE+F MP+K
Sbjct: 214 ISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTV 273
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V W ++ISG+ + F M + V+P TLSS++ + +A L +G +H +
Sbjct: 274 VAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGY 333
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
++ ++SDV I +SL+ LY KCG V A IF I + +VS+N MISG+ G EA
Sbjct: 334 TIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEA 393
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN--IEPGPEH---- 470
L LF +M+ + P+ ITF SVL+AC+ + +E+G + ++N IE ++
Sbjct: 394 LGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKG-------EEIHNLIIEKKLDNNEVV 446
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTHLNLDLA-KLAAQHLM 527
++D+ + G++ EA + + P + W +++ A +H +A +L A+ L
Sbjct: 447 MGALLDMYAKCGAVDEAFSVFKCL---PKRDLVSWTSMITAYGSHGQAYVALELFAEMLQ 503
Query: 528 E-LEPDSATPYVVLS 541
++PD T +LS
Sbjct: 504 SNMKPDRVTFLAILS 518
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L +L A + +L QG IH VV + +++D+ + +L++LY C A +F N++
Sbjct: 6 LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNME 65
Query: 394 ERNIVS-YNSMISGFAQNGLGEEALNLFRKMKD-EGLVPNQITFLSVLSACN-------- 443
+S +N +++G+ +N + EAL LF K+ L P+ T+ SVL AC
Sbjct: 66 NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLG 125
Query: 444 ---HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
H LV+ G + +I G + +V + + + +AI L N M E
Sbjct: 126 KMIHTCLVKTGL--------MMDIVVG----SSLVGMYAKCNAFEKAIWLFNEMP-EKDV 172
Query: 501 GVWGALLGAGRTHLNLD--LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
W ++ N L EP+S T +S ++ R
Sbjct: 173 ACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNR 225
>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g55740, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 830
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/595 (31%), Positives = 327/595 (54%), Gaps = 21/595 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
+A ++F +P RNAV++ A++ G+V+ G EA L+ +M P R S C +A
Sbjct: 226 DASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASA 285
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G ++ G+ A I M E D + S+++ YCK G + A +FD+M EK+VV W
Sbjct: 286 NMGGVEEGKQSHAIAIVNGM-ELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ GY++ ED + MR + ++ +TL L A R + G +V R
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRH 404
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
F+ DI+L ++++ MY + G + +A KVF ++D + WN+L++ Y +G EA RLF
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 258 -----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVN 308
E +P + ++W +I G ++++ ++F M + ++WT +++G V
Sbjct: 465 YGMQLEGVP-PNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQ 523
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVS 367
N EEA + +M +RPN +++ LSA A A+L+ G IH ++++ + S VS
Sbjct: 524 NGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS 583
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I+ SLV +Y+KCG++ A ++F + + N+MIS +A G +EA+ L+R ++ G
Sbjct: 584 IETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG 643
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
L P+ IT +VLSACNH G + + F + + +++P EHY MVD+L AG +A
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKA 703
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ LI M F+P + +L+ + +L ++ L+E EP+++ YV +S+ Y+V
Sbjct: 704 LRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVE 763
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIIL--KDKVHLFLAGRKSCLDLKEIEVTL 600
G + ++R K K ++K PGCSWI + ++ VH+F+A K+ + EI++ L
Sbjct: 764 GSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/529 (27%), Positives = 259/529 (48%), Gaps = 64/529 (12%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+S SY +++L N I EA + M RN + I G + +G YE
Sbjct: 34 SSTSYFHRVSSLCKNG-EIKEALSLVTEMDFRN-LRIGPEIYGEILQGCVYE-------- 83
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
RD + + LK G + AR +E +V + Y K + A +
Sbjct: 84 ----RDLSTGKQIHARILKNG--DFYAR--NEYIETKLVIF------YAKCDALEIAEVL 129
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F K+ +NV +W A++ ++ E F+ M + ++ + + +ACG
Sbjct: 130 FSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWS 189
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R G VHG V + G + + + +S+ MYG+ G +D+A+KVF + R+AV+WN+L+ GY
Sbjct: 190 RFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGY 249
Query: 245 VHNGEIEEAYRLFERM--------------------------PGK-------------DF 265
V NG+ EEA RLF M GK D
Sbjct: 250 VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDN 309
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ T+++ + G +E + +F+ M EKD VTW IISG+V E+A M +
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++ + +TL++++SA+A T L G ++ + ++ + ESD+ + ++++ +Y+KCG++VDA
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F + E++++ +N++++ +A++GL EAL LF M+ EG+ PN IT+ ++ +
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
G V+E F M++ I P + M++ + + G EAI + M
Sbjct: 490 GQVDEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 148/576 (25%), Positives = 254/576 (44%), Gaps = 94/576 (16%)
Query: 21 CSIYEAFEI-FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSV 72
C E E+ F+ + +RN S+AA+I R G+ A +V M P + +V
Sbjct: 120 CDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNV 179
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
C + + GR + ++ +E V S+ D Y K G + +A ++FD++P++N
Sbjct: 180 CKACGALKWSRFGRGVHG-YVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRN 238
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VAW A++ GY++ E+ LF MR+ G+ +T++ A EG Q H
Sbjct: 239 AVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHA 298
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ G + D ILG S++ Y ++G ++ A VF M ++D V+WN +ISGYV G +E+
Sbjct: 299 IAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVED 358
Query: 253 AYRLFERMP--------------------------GK-------------DFVSWTTMIT 273
A + + M GK D V +T++
Sbjct: 359 AIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMD 418
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G++ + ++F+ EKD + W +++ + + EA R F M + V PN +T
Sbjct: 419 MYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVIT 478
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ ++ + L G A + + M+S I
Sbjct: 479 WNLII-----LSLLRNGQVDEAKDMFLQMQSSGIIP------------------------ 509
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLV 448
N++S+ +M++G QNG EEA+ RKM++ GL PN + LSAC H+G
Sbjct: 510 --NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRT 567
Query: 449 EEGFIYFK-SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
G+I +L +IE +VD+ + G + +A + S + P + A++
Sbjct: 568 IHGYIIRNLQHSSLVSIETS------LVDMYAKCGDINKAEKVFGSKLYSELP-LSNAMI 620
Query: 508 GAGRTHLNLDLAKLAAQHL--MELEPDSATPYVVLS 541
A + NL A + L + L+PD+ T VLS
Sbjct: 621 SAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLS 656
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 336/635 (52%), Gaps = 28/635 (4%)
Query: 12 MITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------- 64
+I + N NC +A + ++P S++++I + +F ++ ++ M
Sbjct: 56 LIASYSNYNC-FNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP 114
Query: 65 -----PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
P ++ VC A +S + KVG+ + + D GSM Y + GR+
Sbjct: 115 DSHVLPNLFK--VC--AELSAF-KVGKQIHCVSCVSGL-DMDAFVQGSMFHMYMRCGRMG 168
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+AR++FD+M +K+VV +A++ Y + C E+ + M G+ N ++ +
Sbjct: 169 DARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFN 228
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK----RDAV 235
R ++E V + + GF D + +S++ G ++ + + K +D
Sbjct: 229 RSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKC 288
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK- 294
+++I Y +G + LF + + ITG S G ++K++E+F + E+
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348
Query: 295 ---DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ V+WT+II+G N + EA F EM V+PN +T+ S+L A A L G
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGR 408
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
H V++++ +V + ++L+ +Y+KCG + + +F + +N+V +NS+++GF+ +G
Sbjct: 409 STHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHG 468
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
+E +++F + L P+ I+F S+LSAC VGL +EG+ YFK M Y I+P EHY
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEP 531
+CMV++LGRAG L EA DLI M FEP VWGALL + R N+DLA++AA+ L LEP
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEP 588
Query: 532 DSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCL 591
++ YV+LS++Y+ G + + +R K + ++K+PGCSWI +K++V+ LAG KS
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHP 648
Query: 592 DLKEIEVTLQTISKGT-KEFDWPKHDWSLLGLERD 625
+ +I + ISK K P D++L +E
Sbjct: 649 QIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQ 683
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 214/508 (42%), Gaps = 88/508 (17%)
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
+ ARI ++ + D ++ Y +A + +P+ + ++++++ K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
F +F M G+ +S L LF+ C ++ G Q+H + G D D +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK---- 263
S+ MY R G M +A KVF MS +D V+ ++L+ Y G +EE R+ M
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ VSW +++GF+ G ++++ +F + GF
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHL----------GFC---------------- 249
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
P+Q+T+SSVL + + LN G IH +V+K + D + ++++ +Y K G+V
Sbjct: 250 -----PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 384 DAYRIFTNID-----------------------------------ERNIVSYNSMISGFA 408
+F + E N+VS+ S+I+G A
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---FIYFKSMKTLYNIE 465
QNG EAL LFR+M+ G+ PN +T S+L AC ++ + G + + L N+
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTHLNLDLAKLAA 523
G + ++D+ + G + + + N M P + W +L+ H
Sbjct: 425 VG----SALIDMYAKCGRINLSQIVFNMM---PTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 524 QHLM--ELEPDSATPYVVLSDLYSVIGK 549
+ LM L+PD ++ + L S G+
Sbjct: 478 ESLMRTRLKPD----FISFTSLLSACGQ 501
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%)
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
+Q HA ++K ++D I L++ YS DA + +I + I S++S+I +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
L +++ +F +M GL+P+ ++ C
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC 126
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/514 (35%), Positives = 273/514 (53%), Gaps = 45/514 (8%)
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDG---------YCKKGRVIEAREIFDKMPEKNVV 134
RCE A + A V G++ DG Y G V + R++FD M ++VV
Sbjct: 159 AARCEGAG-AYVAATHALAVRTGALDDGFVGTALAGAYAACGCVRDTRKVFDGMAVRDVV 217
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-- 192
+W M+D Y + +++ LF M+ G+ + + L + ACG R G +H
Sbjct: 218 SWGVMLDSYCQTRNYKEALLLFAKMKNSGVVPDQLILATVLPACGHIRHLRIGKAIHSYM 277
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
LVS D+I+G I + +LIS Y +E
Sbjct: 278 LVS------DMIIGAHISS---------------------------ALISLYASCANMEM 304
Query: 253 AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
A +L+ MP KD VS T M++G++ +E + +F+ MPEKD V+W+A+ISG+V++ Q
Sbjct: 305 AEKLYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQP 364
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA F M +R +++T+ SV+SA A +L++ IHA + + + I N+L
Sbjct: 365 NEALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNAL 424
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ +++KCG + A +F + +N++++ SMIS FA +G G+ +L LF +MKDEG PN+
Sbjct: 425 IDMFAKCGGINLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNE 484
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
+TFLS+L AC H GLV EG + F SM Y IEP EHY CMVD+LGRA + EA+ LI
Sbjct: 485 VTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIE 544
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
SM EP +WG+LL A H +L L AA+ +++L+P+ V+L +Y +
Sbjct: 545 SMHLEPNVPIWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLNN 604
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
VR KL R+ K G SW+ L + H F AG
Sbjct: 605 AQEVRGVMKLHRVSKETGLSWMELNEPFHEFAAG 638
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 151/304 (49%), Gaps = 11/304 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM------PMRNAVSYAAMITGFVRRGMF 54
MA R S+ M+ + + EA +FA M P + ++ G +R
Sbjct: 211 MAVRDVVSWGVMLDSYCQTR-NYKEALLLFAKMKNSGVVPDQLILATVLPACGHIRHLRI 269
Query: 55 YEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+A Y+ + + S+ALIS Y E A +++ M KD+V+ +MV GY +
Sbjct: 270 GKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYAR 329
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
+V AR IFD MPEK+VV+W+AM+ GY+ + + LF M+ G+ + IT+ +
Sbjct: 330 NRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSV 389
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
AC + +H + G + + + N++I M+ + G ++ A VF+ M ++
Sbjct: 390 ISACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLALNVFNEMPLKNV 449
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNM 290
++W S+IS + +G+ + + RLFE+M + + V++ +++ G + + LF+
Sbjct: 450 ITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNEVTFLSLLYACCHAGLVHEGRLLFSS 509
Query: 291 MPEK 294
M ++
Sbjct: 510 MVQQ 513
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 187/642 (29%), Positives = 327/642 (50%), Gaps = 52/642 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----PARWRDSVCSNALISGY 81
A ++F M R++VS+ MI+GF + G + ++ ++ M + + V A +S
Sbjct: 93 AVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSC 152
Query: 82 LKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPE-----KN 132
+ I +V+K D ++++ Y K G + A +F+++ + +N
Sbjct: 153 ASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRN 212
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+ W M+ GY+ +C +LF+ M G++ +S T+ ++ C + G Q+HG
Sbjct: 213 MAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHG 272
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
L+ G D D+ +G +++ MY + G + + ++F + V W S++ NG E
Sbjct: 273 LILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNE 332
Query: 253 AYRLFER----------------MPGKDFVSWTT---MITGFSSK--------------- 278
A F + F+S I GF+ K
Sbjct: 333 ALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVD 392
Query: 279 -----GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
G++E + ++F + +D V+W A+ISGF N+ +EA + F +M K ++PN +T
Sbjct: 393 FYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVT 452
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
++ +LS + + ++H ++++ E++ + NSL+S Y+KCG++ + +F +
Sbjct: 453 MACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLP 512
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
RN V++NS++ GF +G +E F KMK+ + P+ TF S+LS+C+H G V+ G+
Sbjct: 513 VRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWK 572
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
YF SM YN+EP E Y CMVD+LGRAG+L +A DLI SM P +WG+LL + + H
Sbjct: 573 YFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNH 632
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
N LA++ A H+ EL+ S V+L++LY G + RVR K ++K PGCSW
Sbjct: 633 GNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSW 692
Query: 574 IILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKH 615
I + + +H+F+AG S +I T++++S K + H
Sbjct: 693 IEVDNSIHIFVAGDYSHDRSGDIYATIESLSLEMKRVGYVPH 734
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 185/424 (43%), Gaps = 73/424 (17%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
+D N+L+ Y K G A +FE M E+D V+W +M+ G+C+ G +++ +F +M
Sbjct: 72 QDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRM 131
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+ +C GG N + +C G+
Sbjct: 132 VK----------------EC-------------GGSYHNRVACLAALSSCASIKCLTHGL 162
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-----RDAVSWNSLISG 243
++HG + + G D D L +++I MY + G + A VF + R+ WN +I G
Sbjct: 163 EIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILG 222
Query: 244 YVHNGEIEEAYRLFERM--------------------------PGK-------------D 264
YV N + A LF M GK D
Sbjct: 223 YVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDD 282
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
T ++ + G+ E S+++F + V W +++ N EA +F E +
Sbjct: 283 VRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFML 342
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
P+ + L + L A + + +G IH +KM +SDV + +LV Y KCG++
Sbjct: 343 DCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEY 402
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A ++F + R++VS+N++ISGFAQN +EAL FR M+ + + PN +T +LS C H
Sbjct: 403 AQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTH 462
Query: 445 VGLV 448
+ ++
Sbjct: 463 LSVM 466
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 193/443 (43%), Gaps = 53/443 (11%)
Query: 149 FEDGFDLFLSMRRGGMAFNSITL-TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
FED ++L G L +A G + +G Q+HG + +FGF DI + N
Sbjct: 19 FEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKN 78
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK---- 263
S++ MY + G A +F M +RD+VSWN++ISG+ +G+ ++ +F RM +
Sbjct: 79 SLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGS 138
Query: 264 ------------DFVSWTTMITGFSSKGNLEKS------------IELF----------- 288
S + G G L K IE++
Sbjct: 139 YHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAEN 198
Query: 289 -------NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
N + ++ W +I G+V+NE A F+EML + P+ T+ VL
Sbjct: 199 VFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLC 258
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ L G QIH ++ + ++ DV + +L+ +Y KCG+ + +IF N+V +
Sbjct: 259 SQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWG 318
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKT 460
S++ AQNG EAL F + + P+ + L+ L AC+ + L G I+ ++K
Sbjct: 319 SVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKM 378
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
++ + +VD G+ G + A + ++ W AL+ + D A
Sbjct: 379 GFDSDVFVG--GALVDFYGKCGDMEYAQQVFYGLSTRDLVS-WNALISGFAQNKCADEAL 435
Query: 521 LAAQHLM--ELEPDSATPYVVLS 541
A + + +++P++ T +LS
Sbjct: 436 KAFRDMQSKQIKPNTVTMACILS 458
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
++ R S+NA+I+ N C+ EA + F M + N V+ A +++ +
Sbjct: 410 LSTRDLVSWNALISGFAQNKCAD-EALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMIL 468
Query: 57 AEELYVNMPARW--RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+E++ + W +++ +N+LIS Y K G + +FE + ++ V W S++ G+
Sbjct: 469 CKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGM 528
Query: 115 KGRVIEAREIFDKMPEKNV 133
GR E F+KM E N+
Sbjct: 529 HGRTDEMFATFEKMKEANI 547
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/628 (29%), Positives = 320/628 (50%), Gaps = 48/628 (7%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCE 88
IF M R+ +S+ ++ + + G E+ ++ ++ R+ D V S + + +G +
Sbjct: 217 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIF-SLMRRFHDEVNSTTVSTLLSVLGHVD 275
Query: 89 EA--ARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
R +V K V +++ Y GR +EA +F +MP K++++W +++
Sbjct: 276 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 335
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
++ D L SM G + N +T T AC + +G +HGLV G Y
Sbjct: 336 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 395
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM- 260
+ I+GN++++MYG++G M E+ +V M +RD V+WN+LI GY + + ++A F+ M
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455
Query: 261 --------------------PG-------------------KDFVSWTTMITGFSSKGNL 281
PG D ++IT ++ G+L
Sbjct: 456 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 515
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
S +LFN + ++ +TW A+++ ++ EE + +M V +Q + S LSA+
Sbjct: 516 SSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAA 575
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
A A L +G Q+H VK+ E D I N+ +YSKCG + + ++ R++ S+N
Sbjct: 576 AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 635
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+IS ++G EE F +M + G+ P +TF+S+L+AC+H GLV++G Y+ +
Sbjct: 636 ILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD 695
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
+ +EP EH C++D+LGR+G LAEA I+ M +P VW +LL + + H NLD +
Sbjct: 696 FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 755
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA++L +LEP+ + YV+ S++++ G+ D VR + K I+K CSW+ LKDKV
Sbjct: 756 AAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVS 815
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKE 609
F G ++ EI L+ I K KE
Sbjct: 816 SFGIGDRTHPQTMEIYAKLEDIKKLIKE 843
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 270/546 (49%), Gaps = 65/546 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+ A +F MP+RN VS+ M++G VR G++ E E + M + ++ + L
Sbjct: 8 VKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL---GIKPSSFVIASL 64
Query: 83 KVGRCEEAARIFEAMVE-----------KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
V C + +F V+ DV +++ Y G V +R++F++MP++
Sbjct: 65 -VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
NVV+WT+++ GY E+ D++ MR G+ N +++++ +CG G Q+
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 183
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
G V + G + + + NS+I+M G +G +D AN +F MS+RD +SWNS+ + Y NG IE
Sbjct: 184 GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIE 243
Query: 252 EAYRLFERMPG-KDFVSWTTMITGFSSKGNLE---------------------------- 282
E++R+F M D V+ TT+ T S G+++
Sbjct: 244 ESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 303
Query: 283 -------KSIE---LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
+S+E +F MP KD ++W ++++ FVN+ + +A M+ N +
Sbjct: 304 RMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYV 363
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T +S L+A +G +H VV + + I N+LVS+Y K G + ++ R+ +
Sbjct: 364 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 423
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG-LVEEG 451
R++V++N++I G+A++ ++AL F+ M+ EG+ N IT +SVLSAC G L+E G
Sbjct: 424 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 483
Query: 452 FIYFKSMKTLYNIEPG---PEHYA-CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
K + Y + G EH ++ + + G L+ + DL N + W A+L
Sbjct: 484 ----KPLHA-YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII-TWNAML 537
Query: 508 GAGRTH 513
A H
Sbjct: 538 AANAHH 543
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 228/481 (47%), Gaps = 53/481 (11%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K GRV AR +FD MP +N V+W M+ G ++V + +G + F M G+ +S +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 172 TILFEACGRFFR-YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L ACGR +REGVQVHG V++ G D+ + +I+ +YG G + + KVF M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK--------------------------- 263
R+ VSW SL+ GY GE EE +++ M G+
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 264 ------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
++I+ S GN++ + +F+ M E+D ++W +I + + N
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
EE+FR F M R N T+S++LS G IH VVKM +S V + N+
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 301
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
L+ +Y+ G V+A +F + ++++S+NS+++ F +G +AL L M G N
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361
Query: 432 QITFLSVLSACNHVGLVEEGFIYFKSMKT---LYNIEPGPEHYACMVDILGRAGSLAEAI 488
+TF S L+AC E+G I + YN G +V + G+ G ++E+
Sbjct: 362 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN----ALVSMYGKIGEMSESR 417
Query: 489 DLINSMTFEPPPGV--WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
++ M P V W AL+G + D A LAA M +E S+ V+S L +
Sbjct: 418 RVLLQM---PRRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSAC 473
Query: 547 I 547
+
Sbjct: 474 L 474
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+K G V A +F + RN VS+N+M+SG + GL E + FRKM D G+ P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 435 FLSVLSACNHVG 446
S+++AC G
Sbjct: 61 IASLVTACGRSG 72
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 286/555 (51%), Gaps = 72/555 (12%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F + E N ++W M+ G+ +L++ M G++ NS T LF++C +
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS---- 236
+EG Q+H + ++G D+ + S+I+MY + G +++A+KVF S RD VS
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 237 ---------------------------WNSLISGYVHNGEIEEAYRLFERM------P-- 261
WN++ISGY G +EA LF M P
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 262 ------------------GKDFVSW-------------TTMITGFSSKGNLEKSIELFNM 290
G+ SW +I +S G +E++ LF
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+ KD ++W +I G+ ++EA F EML+ PN +T+ S+L A A ++ G
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIG 330
Query: 351 SQIHAHVVKM--NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
IH ++ K + ++ S+Q SL+ +Y+KCGN+ A ++F I +++ S N+MI GFA
Sbjct: 331 RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFA 390
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
+G + A +L +MK +G+ P+ ITF+ +LSAC+H GL + G FKSM Y IEP
Sbjct: 391 MHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKL 450
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
EHY CM+D+LGR+G EA +LINSMT EP +WG+LL A + H NL+L +L AQ LM+
Sbjct: 451 EHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMK 510
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
+EP + YV+LS++Y+ + D RVR K ++K PGCS I + VH FL G K
Sbjct: 511 IEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDK 570
Query: 589 SCLDLKEIEVTLQTI 603
KEI L+ I
Sbjct: 571 FHPQNKEIYKMLEEI 585
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 209/473 (44%), Gaps = 83/473 (17%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+LIS Y + G E+A ++F+ +DVV++ +M+ GY +G + +A+++FD++P K+VV
Sbjct: 117 TSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVV 176
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W AM+ GY ++ +++ +LF M + + + T+ + C G Q+H +
Sbjct: 177 SWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWI 236
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
GF ++ L N++I +Y + G M+ A+ +F + +D +SWN+LI GY + +EA
Sbjct: 237 DNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEAL 296
Query: 255 RLFERM------PGK----------------DFVSW-------------------TTMIT 273
+F+ M P D W T++I
Sbjct: 297 LVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLID 356
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ GN+E + ++F+ + K + A+I GF + + + AF M + + P+ +T
Sbjct: 357 MYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDIT 416
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+LSA + + G +I M ++ YRI
Sbjct: 417 FVGLLSACSHAGLSDLGRKIFK---SMTLD----------------------YRI----- 446
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-HVGLVEEGF 452
E + Y MI ++GL +EA L M E P+ + + S+L AC H L
Sbjct: 447 EPKLEHYGCMIDLLGRSGLFKEAEELINSMTME---PDGVIWGSLLKACKIHKNLELGEL 503
Query: 453 IYFKSMKTLYNIEP-GPEHYACMVDIL---GRAGSLAEAIDLINSMTFEPPPG 501
I K MK IEP P Y + +I R +A L+N + PG
Sbjct: 504 IAQKLMK----IEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPG 552
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 152/326 (46%), Gaps = 50/326 (15%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
T+LI+ N + +A ++F T R+ VSY AMITG+ RG +A++++ +P +D
Sbjct: 117 TSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPI--KD 174
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVV--------------------------A 104
V NA+ISGY ++GR +EA +F M++ DV +
Sbjct: 175 VVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHS 234
Query: 105 W-------------GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
W +++D Y K G + A +F+ + K+V++W ++ GY ++ ++
Sbjct: 235 WIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKE 294
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR--FGFDYDIILGNSI 209
+F M + G N +T+ + AC G +H + + G + L S+
Sbjct: 295 ALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSL 354
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDF 265
I MY + G ++ AN+VF + + S N++I G+ +G + A+ L RM D
Sbjct: 355 IDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDD 414
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMM 291
+++ +++ S G + ++F M
Sbjct: 415 ITFVGLLSACSHAGLSDLGRKIFKSM 440
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 31/202 (15%)
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
L +I +F + E + ++W +I G + A ++ M+ + PN T + +
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A + +G QIHA ++K + D+ + SL+S+Y++ G V DA+++F R++VSY
Sbjct: 88 CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 401 NSMISGFAQNG-----------------------------LG--EEALNLFRKMKDEGLV 429
+MI+G+A G +G +EAL LF +M +
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 430 PNQITFLSVLSACNHVGLVEEG 451
P++ T +VLS C H G VE G
Sbjct: 208 PDESTMATVLSTCTHSGNVELG 229
>gi|224082372|ref|XP_002306667.1| predicted protein [Populus trichocarpa]
gi|222856116|gb|EEE93663.1| predicted protein [Populus trichocarpa]
Length = 630
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 301/580 (51%), Gaps = 44/580 (7%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
R + N + Y + G +A ++F+ + K++V+W + G K + A +FD M
Sbjct: 49 RHTFLGNRCLDLYSQFGNVNDALKVFDDISSKNIVSWNICLKGLLKFDNLSLACSVFDDM 108
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
PE++VV+W +M+ GY F+ + F M++ G+ + T +IL F R G
Sbjct: 109 PERDVVSWNSMISGYASRGYFDCALETFWEMQKLGVRPSEFTYSILMSV---VFGVRHGK 165
Query: 189 QVHGLVSRFGFD-YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++HG + R G +++LGNS+I MYG+ +D A VF M + D +SWNSLIS +
Sbjct: 166 EIHGSIVRSGLGALNVVLGNSLIDMYGKFSSLDYALGVFLTMEELDVISWNSLISVCCQS 225
Query: 248 GEIEEAYRLFERMPG----KDFVSWTTMITG----------------------------- 274
G E A F M D S + +IT
Sbjct: 226 GYPELALDKFCIMRSLGYSPDEFSVSVVITSCLNLRNLEKGKQIFALCVKVGFLCNTIIS 285
Query: 275 ------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
FS LE S+ LF + D ++IS + E+ R F+ L+KD+R
Sbjct: 286 SATIDLFSKCNRLEDSVRLFEEQDQWDSAVCNSMISSYARCGFREDGLRLFVLTLKKDIR 345
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P + TLSSVL S + L QG+Q H+ VK +E D + +SLV +YSK G + + +I
Sbjct: 346 PTEFTLSSVLH-STSILKLEQGTQFHSLAVKSGLELDAIVASSLVEMYSKFGFIDCSIKI 404
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + R+++++N+MI G NG EAL F+++ GL P++IT VL AC+ G +
Sbjct: 405 FNKMVARDLIAWNTMIMGLTHNGRVFEALQTFKELIRTGLPPDRITLAGVLLACSFGGFI 464
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
EG F SM+ Y ++P EHYAC VD+L +AG L EA+ + SM +EP +W ++L
Sbjct: 465 SEGMTVFSSMEERYGVKPSNEHYACFVDLLCQAGRLDEALYVAESMPYEPVSLIWESILH 524
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A H +L L++ A+ LMELEP S+ PY+VL+ ++ + G+ RV+ K ++ K
Sbjct: 525 ACLIHGDLKLSERVAERLMELEPQSSLPYLVLARMFEIRGQWEGVVRVKKAMKRGKVEKV 584
Query: 569 PGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
GCSWI +K++V+ F A + KEI + L+ ++ T+
Sbjct: 585 IGCSWIGVKNQVYTFTADQLQHHRGKEIYLVLRLLNWETE 624
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 136/262 (51%), Gaps = 35/262 (13%)
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + + G + LGN + +Y + G +++A KVF +S ++ VSWN + G + +
Sbjct: 39 HAQLIKVGLNRHTFLGNRCLDLYSQFGNVNDALKVFDDISSKNIVSWNICLKGLLKFDNL 98
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
A +F+ MP +D VSW +MI+G++S+G + ++E F W
Sbjct: 99 SLACSVFDDMPERDVVSWNSMISGYASRGYFDCALETF----------W----------- 137
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES-DVSIQ 369
EM + VRP++ T S ++S + G +IH +V+ + + +V +
Sbjct: 138 ----------EMQKLGVRPSEFTYSILMS---VVFGVRHGKEIHGSIVRSGLGALNVVLG 184
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
NSL+ +Y K ++ A +F ++E +++S+NS+IS Q+G E AL+ F M+ G
Sbjct: 185 NSLIDMYGKFSSLDYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCIMRSLGYS 244
Query: 430 PNQITFLSVLSACNHVGLVEEG 451
P++ + V+++C ++ +E+G
Sbjct: 245 PDEFSVSVVITSCLNLRNLEKG 266
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 182/398 (45%), Gaps = 49/398 (12%)
Query: 1 MADRTSASYNAMITALIN-NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
++ + S+N + L+ +N S+ A +F MP R+ VS+ +MI+G+ RG F A E
Sbjct: 77 ISSKNIVSWNICLKGLLKFDNLSL--ACSVFDDMPERDVVSWNSMISGYASRGYFDCALE 134
Query: 60 LYVNM------PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+ M P+ + S+ + + ++ G+ + + + +VV S++D Y
Sbjct: 135 TFWEMQKLGVRPSEFTYSILMSVVFG--VRHGKEIHGSIVRSGLGALNVVLGNSLIDMYG 192
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K + A +F M E +V++W +++ + E D F MR G + + ++++
Sbjct: 193 KFSSLDYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCIMRSLGYSPDEFSVSV 252
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ +C +G Q+ L + GF + I+ ++ I ++ + ++++ ++F + D
Sbjct: 253 VITSCLNLRNLEKGKQIFALCVKVGFLCNTIISSATIDLFSKCNRLEDSVRLFEEQDQWD 312
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDF---------------------------- 265
+ NS+IS Y G E+ RLF KD
Sbjct: 313 SAVCNSMISSYARCGFREDGLRLFVLTLKKDIRPTEFTLSSVLHSTSILKLEQGTQFHSL 372
Query: 266 ----------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+ ++++ +S G ++ SI++FN M +D + W +I G +N + EA
Sbjct: 373 AVKSGLELDAIVASSLVEMYSKFGFIDCSIKIFNKMVARDLIAWNTMIMGLTHNGRVFEA 432
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+ F E++R + P+++TL+ VL A + +++G +
Sbjct: 433 LQTFKELIRTGLPPDRITLAGVLLACSFGGFISEGMTV 470
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 47/226 (20%)
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-------------------- 393
HA ++K+ + + N + LYS+ GNV DA ++F +I
Sbjct: 39 HAQLIKVGLNRHTFLGNRCLDLYSQFGNVNDALKVFDDISSKNIVSWNICLKGLLKFDNL 98
Query: 394 -----------ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF---LSVL 439
ER++VS+NSMISG+A G + AL F +M+ G+ P++ T+ +SV+
Sbjct: 99 SLACSVFDDMPERDVVSWNSMISGYASRGYFDCALETFWEMQKLGVRPSEFTYSILMSVV 158
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
H G G I + L N+ G ++D+ G+ SL A+ + +M E
Sbjct: 159 FGVRH-GKEIHGSIVRSGLGAL-NVVLGNS----LIDMYGKFSSLDYALGVFLTME-ELD 211
Query: 500 PGVWGALLG----AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
W +L+ +G L LD K + PD + VV++
Sbjct: 212 VISWNSLISVCCQSGYPELALD--KFCIMRSLGYSPDEFSVSVVIT 255
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/628 (29%), Positives = 320/628 (50%), Gaps = 48/628 (7%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCE 88
IF M R+ +S+ ++ + + G E+ ++ ++ R+ D V S + + +G +
Sbjct: 200 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIF-SLMRRFHDEVNSTTVSTLLSVLGHVD 258
Query: 89 EA--ARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
R +V K V +++ Y GR +EA +F +MP K++++W +++
Sbjct: 259 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 318
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
++ D L SM G + N +T T AC + +G +HGLV G Y
Sbjct: 319 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 378
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM- 260
+ I+GN++++MYG++G M E+ +V M +RD V+WN+LI GY + + ++A F+ M
Sbjct: 379 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 438
Query: 261 --------------------PG-------------------KDFVSWTTMITGFSSKGNL 281
PG D ++IT ++ G+L
Sbjct: 439 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 498
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
S +LFN + ++ +TW A+++ ++ EE + +M V +Q + S LSA+
Sbjct: 499 SSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAA 558
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
A A L +G Q+H VK+ E D I N+ +YSKCG + + ++ R++ S+N
Sbjct: 559 AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 618
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+IS ++G EE F +M + G+ P +TF+S+L+AC+H GLV++G Y+ +
Sbjct: 619 ILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD 678
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
+ +EP EH C++D+LGR+G LAEA I+ M +P VW +LL + + H NLD +
Sbjct: 679 FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 738
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA++L +LEP+ + YV+ S++++ G+ D VR + K I+K CSW+ LKDKV
Sbjct: 739 AAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVS 798
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKE 609
F G ++ EI L+ I K KE
Sbjct: 799 SFGIGDRTHPQTMEIYAKLEDIKKLIKE 826
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 152/545 (27%), Positives = 264/545 (48%), Gaps = 74/545 (13%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS------GY 81
++F MP RN VS+ +++ G+ +G E ++Y M R C+ +S G
Sbjct: 98 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM--RGEGVGCNENSMSLVISSCGL 155
Query: 82 LK---VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
LK +GR + ++ ++ +E + S++ G V A IFD+M E++ ++W +
Sbjct: 156 LKDESLGR-QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNS 214
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+ Y + E+ F +F MRR NS T++ L G + G +HGLV + G
Sbjct: 215 IAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 274
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
FD + + N+++ MY G EAN VF M +D +SWNSL++ +V++G +A L
Sbjct: 275 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 334
Query: 259 RM--PGK--DFVSWTT-----------------------------------MITGFSSKG 279
M GK ++V++T+ +++ + G
Sbjct: 335 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 394
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+ +S + MP +D V W A+I G+ +E ++A F M + V N +T+ SVLS
Sbjct: 395 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 454
Query: 340 ASAATAT-LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A L +G +HA++V ESD ++NSL+++Y+KCG++ + +F +D RNI+
Sbjct: 455 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 514
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++N+M++ A +G GEE L L KM+ G+ +Q +F LSA + ++EEG + +
Sbjct: 515 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG----QQL 570
Query: 459 KTLYNIEPGPEH----YACMVDILGRAGSLAEAIDLINSMTFEPPPGV------WGALLG 508
L ++ G EH + D+ + G + E + ++ PP V W L+
Sbjct: 571 HGL-AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML-------PPSVNRSLPSWNILIS 622
Query: 509 AGRTH 513
A H
Sbjct: 623 ALGRH 627
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 153/536 (28%), Positives = 266/536 (49%), Gaps = 65/536 (12%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAAR 92
MP+RN VS+ M++G VR G++ E E + M + ++ + L V C +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL---GIKPSSFVIASL-VTACGRSGS 56
Query: 93 IFEAMVE-----------KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+F V+ DV +++ Y G V +R++F++MP++NVV+WT+++
Sbjct: 57 MFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 116
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY E+ D++ MR G+ N +++++ +CG G Q+ G V + G +
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 176
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+ + NS+I+M G +G +D AN +F MS+RD +SWNS+ + Y NG IEE++R+F M
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 262 G-KDFVSWTTMITGFSSKGNLE-----------------------------------KSI 285
D V+ TT+ T S G+++ +S+
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 286 E---LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
E +F MP KD ++W ++++ FVN+ + +A M+ N +T +S L+A
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+G +H VV + + I N+LVS+Y K G + ++ R+ + R++V++N+
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNA 416
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG-LVEEGFIYFKSMKTL 461
+I G+A++ ++AL F+ M+ EG+ N IT +SVLSAC G L+E G K +
Sbjct: 417 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG----KPLHA- 471
Query: 462 YNIEPG---PEHYA-CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
Y + G EH ++ + + G L+ + DL N + W A+L A H
Sbjct: 472 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII-TWNAMLAANAHH 526
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 218/465 (46%), Gaps = 53/465 (11%)
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR-YRE 186
MP +N V+W M+ G ++V + +G + F M G+ +S + L ACGR +RE
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
GVQVHG V++ G D+ + +I+ +YG G + + KVF M R+ VSW SL+ GY
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 247 NGEIEEAYRLFERMPGK---------------------------------------DFVS 267
GE EE +++ M G+
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
++I+ S GN++ + +F+ M E+D ++W +I + + N EE+FR F M R
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
N T+S++LS G IH VVKM +S V + N+L+ +Y+ G V+A
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + ++++S+NS+++ F +G +AL L M G N +TF S L+AC
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 448 VEEGFIYFKSMKT---LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV-- 502
E+G I + YN G +V + G+ G ++E+ ++ M P V
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGN----ALVSMYGKIGEMSESRRVLLQM---PRRDVVA 413
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
W AL+G + D A LAA M +E S+ V+S L + +
Sbjct: 414 WNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSACL 457
>gi|297744641|emb|CBI37903.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 259/445 (58%), Gaps = 32/445 (7%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN LI+ Y K G+ EA ++F+ M +++ +W +M+ GY K G + AR++FDKMPEK+V
Sbjct: 98 SNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDV 157
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W MV + + +++ + R+ G+ N + + C + QVHG
Sbjct: 158 VSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQ 217
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ GF +++L +S++ Y + G M +A
Sbjct: 218 ILVAGFLSNVVLSSSVLDAYVKCGLMGDAR------------------------------ 247
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
+LF+ M +D ++WTTM++G++ G+++ + ELF MPEK+ V+WTA+ISG+ N
Sbjct: 248 -KLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGH 306
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+A F +M+ VRP+Q T SS L A A+ A+L G QIHA+++++N + + + ++L+
Sbjct: 307 KALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALI 366
Query: 374 SLYSKCGNVVDAYRIFTNIDER-NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+YSKCG++ ++F + + ++V +N++IS AQ+G GEEA+ + M G P++
Sbjct: 367 DMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDK 426
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
ITF+ +L+AC+H GLV++G +F+SM Y I P EHYAC++D+LGRAG E +D +
Sbjct: 427 ITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLE 486
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLD 517
M ++P VW ALLG R H +++
Sbjct: 487 KMPYKPDDRVWNALLGVCRIHGHIE 511
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 186/421 (44%), Gaps = 72/421 (17%)
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD-IILGNSIITMYGRL 216
++ R G+ +S TL L + C REG +VH + G L N +I MY +
Sbjct: 49 NLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKC 108
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFS 276
G EA KVF MS R+ SWN+++SGY G I+ A +LF++MP KD VSW TM+ +
Sbjct: 109 GKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHA 168
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G ++EA R++ E + ++ N + +
Sbjct: 169 QCG-------------------------------YWDEALRFYSEFRQLGIQCNGFSFAG 197
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR--------- 387
VL+ + Q+H ++ S+V + +S++ Y KCG + DA +
Sbjct: 198 VLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARD 257
Query: 388 ----------------------IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+F + E+N VS+ ++ISG+A+NG+G +AL LF KM
Sbjct: 258 VLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMML 317
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
+ P+Q TF S L AC + ++ G + + N +P + ++D+ + GSL
Sbjct: 318 FHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRI-NFQPNTIVVSALIDMYSKCGSLG 376
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL-----EPDSATPYVVL 540
+ + M + +W ++ A H + A Q L ++ +PD T V+L
Sbjct: 377 IGRKVFDLMGNKLDVVLWNTIISALAQH---GCGEEAIQMLDDMVRSGAKPDKITFVVIL 433
Query: 541 S 541
+
Sbjct: 434 N 434
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 150/303 (49%), Gaps = 14/303 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIY-EAFEIFATMPMR----NAVSYAAMITGFVRRGMFY 55
M ++ S+N M+ A + C + EA ++ N S+A ++T V+
Sbjct: 152 MPEKDVVSWNTMVIA--HAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVG 209
Query: 56 EAEELY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+++ + + + V S++++ Y+K G +A ++F+ M +DV+AW +MV GY
Sbjct: 210 LTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYA 269
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G + A E+F +MPEKN V+WTA++ GY + +LF M + + T +
Sbjct: 270 KWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSS 329
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM-SKR 232
AC + G Q+H + R F + I+ +++I MY + G + KVF +M +K
Sbjct: 330 CLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKL 389
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELF 288
D V WN++IS +G EEA ++ + M D +++ ++ S G +++ + F
Sbjct: 390 DVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFF 449
Query: 289 NMM 291
M
Sbjct: 450 ESM 452
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 257/452 (56%), Gaps = 32/452 (7%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD---------------- 233
VH V + G D +GN++I Y + G +A KVF M +RD
Sbjct: 27 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGE 86
Query: 234 ---------------AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
VSWN+++ GY GE+E A+ LF+RMP ++ VSW+TM++G+ K
Sbjct: 87 LAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKK 146
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G+LE + +F+ MP K+ VTWT ++S +EA + F +M V + + S+L
Sbjct: 147 GDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSIL 206
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF-TNIDERNI 397
+A A + +L+ G +IH +V K N+ + N+L+ ++ KCG V A +F T +++
Sbjct: 207 AACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDS 266
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
VS+NS+I GFA +G G++AL LF +MK +G P+ +T ++VLSAC H+G V+EG +F +
Sbjct: 267 VSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSN 326
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
M+ Y I P EHY CM+D+LGR G + EA+DLI SM +EP +WG+LL A R H N++
Sbjct: 327 MERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVE 386
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
A++A L +L+P +A Y VLS++Y+ G+ D + RM+ K +K+ G SW+ L
Sbjct: 387 YAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELN 446
Query: 578 DKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+ H F G + D +I + +S K
Sbjct: 447 ETFHEFTVGDRKHQDSDQISEMVDRLSSHVKH 478
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA+I A + N +A ++F MP R+ VS+ + VR G +L+ MP +
Sbjct: 44 NALIDAY-SKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEK-- 100
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+V N ++ GY K G E A +F+ M E++VV+W +MV GYCKKG + AR IFDKMP
Sbjct: 101 DTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMP 160
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
KN+V WT MV + ++ LF M+ + + + + AC G +
Sbjct: 161 SKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKR 220
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNG 248
+H V + + N++I M+ + G ++ A+ VF + ++D+VSWNS+I G+ +G
Sbjct: 221 IHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHG 280
Query: 249 EIEEAYRLFERMPGKDF-VSWTTMIT--------GFSSKG-----NLEKSIELFNMMPE 293
++A LF +M + F TMI GF +G N+E+ + +MP+
Sbjct: 281 HGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERD---YGIMPQ 336
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 276/506 (54%), Gaps = 32/506 (6%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+ IF + V W + + + D D LF +R ++ + T + + +AC R
Sbjct: 66 AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
R G VHG V + G ++ L N I+ +Y G + A KVF M +RD ++WN +
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+ V G+ E AY+LF MP ++ SWT+MI G++ G +++I+L
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDL------------- 232
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
F+EM + PN++T+ +VL A A L G +IH +
Sbjct: 233 ------------------FLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRS 274
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
E ++ + N+L+ +Y KCG + DA RIF N++ER +VS+++MI+G A +G E+AL LF
Sbjct: 275 GYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALF 334
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KM + G+ PN +TF+ +L AC+H+G+VE+G YF SM Y I P EHY CMVD+ R
Sbjct: 335 NKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSR 394
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA + I +M P VWGALLG + H N+ LA+ A +HL +L+P + YVVL
Sbjct: 395 AGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVL 454
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
S++Y+ G+ D RVR + + ++K+PG S I+++ V+ F+AG + +EI T
Sbjct: 455 SNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTW 514
Query: 601 QTISKGTKEFDW-PKHDWSLLGLERD 625
+ + + K + P LL +E D
Sbjct: 515 EKLLQRMKLKGYVPNTSVVLLDMEED 540
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 180/389 (46%), Gaps = 31/389 (7%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N ++ Y G A ++F+ M ++DV+ W M+ K G A ++F +MPE+NV
Sbjct: 151 QNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNV 210
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+WT+M+ GY + ++ DLFL M G+ N +T+ + AC G ++H
Sbjct: 211 RSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDF 270
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+R G++ +I + N++I MY + G +++A ++F M +R VSW+++I+G +G E+A
Sbjct: 271 SNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDA 330
Query: 254 YRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIIS 304
LF +M + V++ ++ S G +EK + F M + + ++
Sbjct: 331 LALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVD 390
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
F +EA + + M + PN + ++L + + H+ K++ +
Sbjct: 391 LFSRAGLLQEAHEFIMNM---PIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLN 447
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI-------------VSYNSMISGFAQNG 411
D L ++Y++ G D R+ + +R + V YN ++G +
Sbjct: 448 D-GYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYN-FVAGDDTHP 505
Query: 412 LGEEALN----LFRKMKDEGLVPNQITFL 436
EE L ++MK +G VPN L
Sbjct: 506 QTEEIFQTWEKLLQRMKLKGYVPNTSVVL 534
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 24/348 (6%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R ++N MI L+ A+++FA MP RN S+ +MI G+ + G EA +L
Sbjct: 174 MPQRDVITWNIMIARLVKMG-DAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDL 232
Query: 61 YVNM--PARWRDSVCSNALISGYLKVGRCEEAARIFE----AMVEKDVVAWGSMVDGYCK 114
++ M + V A++ +G RI + + EK++ +++D Y K
Sbjct: 233 FLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVK 292
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + +A IFD M E+ VV+W+AM+ G ED LF M G+ N++T +
Sbjct: 293 CGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGI 352
Query: 175 FEACGRFFRYREGVQVHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEANK-VFSMMSKR 232
AC +G + ++R +G I ++ ++ R G + EA++ + +M
Sbjct: 353 LHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAP 412
Query: 233 DAVSWNSLISGYVHNGEI---EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
+ V W +L+ G + I EEA R ++ + + + ++ G E +
Sbjct: 413 NGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRK 472
Query: 290 MMPE---KDDVTWTAI-ISGFVNN--------EQYEEAFRWFIEMLRK 325
+M + K W++I + G V N Q EE F+ + ++L++
Sbjct: 473 LMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQR 520
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/591 (31%), Positives = 311/591 (52%), Gaps = 72/591 (12%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYL 82
+A ++F MP + VSY MI GFV+ + EA ++Y M + + V ++IS
Sbjct: 13 DARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPNEVTMASVISACC 72
Query: 83 KVGR---CE--------------------------------EAARIFEAMVEKDVVAWGS 107
+VGR C EA +F+ M EK+VV+W
Sbjct: 73 RVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFDEMQEKNVVSWNV 132
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
M++GY K G A+E+F+ +P+K++V+W ++DGY++V+ + ++ M G+ +
Sbjct: 133 MLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMMYRLMVSTGLGPS 192
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFD-YDIILGNSIITMYGRLGFMDEANKVF 226
+T+ L ACGR EG Q+H +V + FD YD + ++I Y G ++EA
Sbjct: 193 EVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQA-TVIHFYSACGRINEACFQL 251
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
K S N+LI+G++ N I++A LF MP +D SW+TMI+G++ ++E
Sbjct: 252 EFGMKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYTQSDQPGMALE 311
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
LF+ M + SG +RPN++T+ SV SA AA T
Sbjct: 312 LFHRM----------VTSG---------------------IRPNEVTMVSVFSAIAALGT 340
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER--NIVSYNSMI 404
L +G H +V ++ + ++ S++ +Y+KCG++ A +F I ++ + +N++I
Sbjct: 341 LKEGRWAHEYVHYNSIPLNDNLSASIIDMYAKCGSINTALEVFYQIRDKASTVSPWNTII 400
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
G A +G + +L ++ ++ + + ITF+ VLSAC H GLV G YFKSMK+ YNI
Sbjct: 401 CGLATHGHAKLSLEIYSDLQRRHIKLSAITFIGVLSACCHAGLVGLGKSYFKSMKSKYNI 460
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
+P HY CMVD+LG+AG L E +LI SM + +WG LL A +TH N+ + + AA+
Sbjct: 461 DPDIRHYGCMVDLLGKAGRLEEVEELIRSMPMKADVVIWGMLLSACKTHRNITIGERAAE 520
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+L +L+P ++LS+LY+ +G+ D VR + R+ + PG S ++
Sbjct: 521 NLAKLDPSHGPSRILLSNLYADVGRWEDAFLVRRVMQSHRMHRLPGYSGVV 571
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 220/461 (47%), Gaps = 79/461 (17%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
M+ GY K G + +AR++F+ MP+K V++T M+ G++K D + + ++ MR G+ N
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+T+ + AC R R + +HGLV + FD +++ +++ MY + EA +F
Sbjct: 61 EVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFD 120
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
M +++ VSWN +++GY G A +FE +P KD VSW T+
Sbjct: 121 EMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTI---------------- 164
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
I G+V E+ EA + M+ + P+++T+ ++SA +
Sbjct: 165 ---------------IDGYVRVERLREALMMYRLMVSTGLGPSEVTMIDLISACGRAMAI 209
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG--------------------------- 380
+G Q+H VVK + + +Q +++ YS CG
Sbjct: 210 VEGQQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEACFQLEFGMKDHVASRNALIAGF 269
Query: 381 ---NVVDAYR-IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
++D R +F + ER++ S+++MISG+ Q+ AL LF +M G+ PN++T +
Sbjct: 270 IRNRIIDQARELFNEMPERDVFSWSTMISGYTQSDQPGMALELFHRMVTSGIRPNEVTMV 329
Query: 437 SVLSACNHVGLVEEG-----FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI 491
SV SA +G ++EG ++++ S+ N+ A ++D+ + GS+ A+++
Sbjct: 330 SVFSAIAALGTLKEGRWAHEYVHYNSIPLNDNLS------ASIIDMYAKCGSINTALEVF 383
Query: 492 -----NSMTFEPPPGVWGALLGAGRTHLNLDL-AKLAAQHL 526
+ T P + L G L+L++ + L +H+
Sbjct: 384 YQIRDKASTVSPWNTIICGLATHGHAKLSLEIYSDLQRRHI 424
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/447 (38%), Positives = 255/447 (57%), Gaps = 35/447 (7%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M R +A N T +L + C +G ++H + +FGF+ D+ + NS+I MY G
Sbjct: 1 MVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGR 60
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
+ +A +F + S D V+WNS+I GYV NGEI A LFE MP +D SW +MI G+
Sbjct: 61 IGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGN 120
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISG-------------------------------FV 307
G++ + +LFN MP +D V+W +I G +V
Sbjct: 121 GDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYV 180
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN--MESD 365
+ Y+E R F +M+ + PN+ TL SVL+A A L++G IH++ +K N +E D
Sbjct: 181 RIKDYDECLRMFDKMM-GETMPNEATLVSVLTACAHLGRLDRGKWIHSY-IKNNRVIEPD 238
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
V + +L+++Y+KCG + A +F + R++VS+NSMI G+ +G ++AL +F M+
Sbjct: 239 VLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEK 298
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
G +PN TF+ VLSAC H G++ EG+ YF M+ Y IEP EHY CMVD+LGRAG +
Sbjct: 299 RGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMK 358
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYS 545
+ +LI M E +WGALL A RTH N +LA++ A+ L+ELEP PY++LS++Y+
Sbjct: 359 DLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYA 418
Query: 546 VIGKKRDGNRVRMKKKLKRIRKSPGCS 572
GK D VR K + + K+ G S
Sbjct: 419 AEGKWDDVEIVRKMMKERGLTKTTGLS 445
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 192/414 (46%), Gaps = 42/414 (10%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I +A +F + + V++ +MI G+V+ G A EL+ MP R D N++I+GY+
Sbjct: 61 IGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPER--DLFSWNSMIAGYV 118
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
G A +F M +D+V+W M+DGY + + A E+F+ MP +NVV+W M+
Sbjct: 119 GNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLAL 178
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV-SRFGFDY 201
Y+++ +++ +F M M N TL + AC R G +H + + +
Sbjct: 179 YVRIKDYDECLRMFDKMMGETMP-NEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEP 237
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D++L +++TMY + G MD A VF MS R VSWNS+I GY +G+ ++A +F M
Sbjct: 238 DVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDME 297
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
+ P +D T+ ++S ++ E + W+ +
Sbjct: 298 KRG---------------------------PMPNDATFICVLSACAHSGMILEGW-WYFD 329
Query: 322 MLRK--DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
++R+ + P ++ + ++ + KM ME ++ +L+S
Sbjct: 330 LMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEEL---IRKMPMEGGTALWGALLSACRTH 386
Query: 380 GNV----VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
N + A R+ ++ R+I Y + + +A G ++ + + MK+ GL
Sbjct: 387 SNSELAEIVAKRLI-ELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLT 439
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 147/339 (43%), Gaps = 49/339 (14%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N+MI + N + A ++F MP R+ VS+ MI G+ + A EL
Sbjct: 102 MPERDLFSWNSMIAGYVGNG-DMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACEL 160
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM----------------------- 97
+ MP +R+ V N +++ Y+++ +E R+F+ M
Sbjct: 161 FNWMP--YRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGR 218
Query: 98 ----------------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+E DV+ +++ Y K G + AR++FDKM ++VV+W +M+
Sbjct: 219 LDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIM 278
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR-FGFD 200
GY + ++FL M + G N T + AC EG L+ R + +
Sbjct: 279 GYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIE 338
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLISG-YVH-NGEIEE--AYR 255
+ ++ + GR G M + ++ M + W +L+S H N E+ E A R
Sbjct: 339 PKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKR 398
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
L E P +D + + ++++G + + MM E+
Sbjct: 399 LIELEP-RDIGPYLLLSNIYAAEGKWDDVEIVRKMMKER 436
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 194/619 (31%), Positives = 323/619 (52%), Gaps = 60/619 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS-----------VCS 74
A ++F +P +A +Y A+I + G F+ A +LY +M R+R + CS
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM-LRFRVAPNKYTFPFVLKACS 111
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
AL+ L+ GR A + D+ +++D Y + R AR +F KMP ++VV
Sbjct: 112 -ALVD--LRAGRTIHAHAAAAGL-HTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
AW AM+ GY + L M+ GG+ N+ TL L + +G +H
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 194 VSRFGFDYD---IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
R + + +++G +++ MY + + A +VF M R+ V+W++LI G+V +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 251 EEAYRLFERM--PGKDFVSWT--------------------------------------T 270
EA+ LF+ M G F+S T +
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+++ ++ G + ++ F+ + KD +++ A++SG V N + EEAF F +M ++ P+
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T+ S++ A + A L G H V+ + + SI NSL+ +Y+KCG + + ++F
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ R++VS+N+MI+G+ +GLG+EA LF MK++G P+ +TF+ +++AC+H GLV E
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTE 527
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G +F +M Y I P EHY CMVD+L R G L EA I SM + VWGALLGA
Sbjct: 528 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H N+DL K ++ + +L P+ +V+LS+++S G+ + VR+ +K+K +KSPG
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 647
Query: 571 CSWIILKDKVHLFLAGRKS 589
SWI + +H F+ G +S
Sbjct: 648 YSWIEINGSLHAFVGGDQS 666
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 196/396 (49%), Gaps = 44/396 (11%)
Query: 100 KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM 159
KD W ++ + +G++ AR++FD++P + A+ A++ Y + F DL+ SM
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
R +A N T + +AC R G +H + G D+ + ++I +Y R
Sbjct: 92 LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA--------------------YRLFER 259
A VF+ M RD V+WN++++GY ++G A L
Sbjct: 152 GPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL 211
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIE-----------------------LFNMMPEKDD 296
+ + T I + + LE++ E +F+ MP ++D
Sbjct: 212 LAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND 271
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR-PNQLTLSSVLSASAATATLNQGSQIHA 355
VTW+A+I GFV ++ EAF F +ML + + + +++S L A+ A L+ G+Q+HA
Sbjct: 272 VTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHA 331
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
+ K + +D++ NSL+S+Y+K G + +A F I ++ +SY +++SG QNG EE
Sbjct: 332 LIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEE 391
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
A +F+KM+ + P+ T +S++ AC+H+ ++ G
Sbjct: 392 AFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHG 427
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 8/251 (3%)
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
KD W + S+G L + ++F+ +P D + A+I + + A + M
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
LR V PN+ T VL A +A L G IHAH + +D+ + +L+ LY +C
Sbjct: 92 LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE-GLVPNQITFLSVLS- 440
A +F + R++V++N+M++G+A +G+ A+ M+D GL PN T +S+L
Sbjct: 152 GPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL 211
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY---ACMVDILGRAGSLAEAIDLINSMTFE 497
H L + I+ ++ +E E ++D+ + L A + + M
Sbjct: 212 LAQHGALFQGTSIHAYCLRAC--LEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR 269
Query: 498 PPPGVWGALLG 508
W AL+G
Sbjct: 270 NDV-TWSALIG 279
>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 186/594 (31%), Positives = 326/594 (54%), Gaps = 20/594 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
+A ++F +P RN V++ A++ G+V+ GM EA L+ +M P R S C +A
Sbjct: 226 DARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASA 285
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G ++ G+ A I + E D + S+++ YCK G + A +FD+M +K+VV W
Sbjct: 286 NMGGVEEGKQSHAIAIVNGL-ELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWN 344
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ GY++ E+ + MR + ++ +TL L A R + G +V R
Sbjct: 345 LIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQCYCIRH 404
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
F+ DI+L ++++ MY + G + +A KVF +++D + WN+L++ Y +G E RLF
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLF 464
Query: 258 -----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVN 308
E +P + ++W +I G ++++ ++F M + ++WT +++G V
Sbjct: 465 YGMQLEGVP-PNVITWNLIILSLLRNGEVDEAKDMFLQMQSSGIFPNLISWTTMMNGMVQ 523
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVS 367
N EEA + +M +RPN ++++ LSA A A+L+ G IH ++++ + S VS
Sbjct: 524 NGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNLQHSSSVS 583
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I+ SLV +Y+KCG++ A ++F + + YN+MIS +A G +EA+ L+R ++ G
Sbjct: 584 IETSLVDMYAKCGDINKAEKVFGSKLYSELPLYNAMISAYALYGNLKEAIALYRSLEGVG 643
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
L P+ IT +VLSACNH G + M + + + P EHY MVD+L AG +A
Sbjct: 644 LKPDNITITNVLSACNHAGDNNQATEIVTEMVSKHGMNPCLEHYGLMVDLLASAGQTDKA 703
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ LI M ++P + +L+ + +L ++ L+E EPD++ YV +S+ Y+V
Sbjct: 704 LRLIEEMPYKPDARMIQSLVASCNKQPKSELVDYLSRQLIESEPDNSGNYVTISNAYAVE 763
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILK-DKVHLFLAGRKSCLDLKEIEVTL 600
G + ++R K K ++K PGCSWI +K + VH+F+A K+ + + EI+ L
Sbjct: 764 GSWDEVVKMREIMKAKGLKKKPGCSWIQIKGEGVHVFVANDKTHIRINEIQRIL 817
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 250/529 (47%), Gaps = 64/529 (12%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+S SY +++L N I EA + M RN + I G + +G YE
Sbjct: 34 SSTSYFHRVSSLCKNG-EIKEALSLVTEMDFRN-LRIGPEIYGEILQGCVYE-------- 83
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
RD + + LK G E +V Y K + A +
Sbjct: 84 ----RDLCTGKQIHARILKNGDFYAKNEYIET----------KLVIFYAKCDALDIAEVL 129
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F K+ +NV +W A++ ++ E F+ M + ++ + + +ACG
Sbjct: 130 FTKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWS 189
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R G VHG V + G + + + +S+ MYG+ G +D+A KVF + +R+ V+WN+L+ GY
Sbjct: 190 RFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGY 249
Query: 245 VHNGEIEEAYRLFERM--------------------------PGK-------------DF 265
V NG EEA RLF M GK D
Sbjct: 250 VQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDN 309
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ T+++ + G +E + +F+ M +KD VTW IISG+V E A M +
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLE 369
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++ + +TL++++SA+A T L G ++ + ++ + ESD+ + ++++ +Y+KCG++VDA
Sbjct: 370 KLKYDCVTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F + E++++ +N++++ +A++GL E L LF M+ EG+ PN IT+ ++ +
Sbjct: 430 KKVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
G V+E F M++ I P + M++ + + G EAI + M
Sbjct: 490 GEVDEAKDMFLQMQS-SGIFPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 257/540 (47%), Gaps = 39/540 (7%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALISGY 81
+F + +RN S+AA+I R G+ A +V M P + +VC +
Sbjct: 129 LFTKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQW 188
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+ GR + +A +E V S+ D Y K G + +AR++FD++PE+NVVAW A++
Sbjct: 189 SRFGRGVHG-YVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMV 247
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY++ E+ LF MR+ G+ +T++ A EG Q H + G +
Sbjct: 248 GYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLEL 307
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D ILG S++ Y ++G ++ A VF M +D V+WN +ISGYV G +E A + + M
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMR 367
Query: 262 GK----DFVSWTTMITGFSSKGNLE--KSIELFNMMP--EKDDVTWTAIISGFVNNEQYE 313
+ D V+ T+++ + NL+ K ++ + + E D V + ++ +
Sbjct: 368 LEKLKYDCVTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
+A + F KD+ + +++L+A A + +G ++ + + +V N ++
Sbjct: 428 DAKKVFDSTAEKDL----ILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNVITWNLII 483
Query: 374 SLYSKCGNVVDAYRIFTNIDER----NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+ G V +A +F + N++S+ +M++G QNG EEA+ RKM++ GL
Sbjct: 484 LSLLRNGEVDEAKDMFLQMQSSGIFPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLR 543
Query: 430 PNQITFLSVLSACN-----HVGLVEEGFIYFK-SMKTLYNIEPGPEHYACMVDILGRAGS 483
PN ++ LSAC H G G+I + +IE +VD+ + G
Sbjct: 544 PNAVSITVALSACANLASLHFGRSIHGYIIRNLQHSSSVSIETS------LVDMYAKCGD 597
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL--MELEPDSATPYVVLS 541
+ +A + S + P ++ A++ A + NL A + L + L+PD+ T VLS
Sbjct: 598 INKAEKVFGSKLYSELP-LYNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLS 656
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 198/642 (30%), Positives = 331/642 (51%), Gaps = 60/642 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS-----------VCS 74
A ++F +P +A +Y A+I + G F+ A +LY +M R+R + CS
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM-LRFRVAPNKYTFPFVLKACS 111
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
AL+ L+ GR A + D+ +++D Y + R AR +F KMP ++VV
Sbjct: 112 -ALVD--LRAGRTIHAHAAAAGL-HTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
AW AM+ GY + L M+ GG+ N+ TL L + +G +H
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 194 VSRFGFDYD---IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
R + + +++G +++ MY + + A +VF M R+ V+W++LI G+V +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 251 EEAYRLFERM--PGKDFVSWT--------------------------------------T 270
EA+ LF+ M G F+S T +
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+++ ++ G + ++ F+ + KD +++ A++SG V N + EEAF F +M ++ P+
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T+ S++ A + A L G H V+ + + SI NSL+ +Y+KCG + + ++F
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ R++VS+N+MI+G+ +GLG+EA LF MK++G P+ +TF+ +++AC+H GLV E
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTE 527
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G +F +M Y I P EHY CMVD+L R G L EA I SM + VWGALLGA
Sbjct: 528 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H N+DL K ++ + +L P+ +V+LS+++S G+ + VR+ +K+K +KSPG
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 647
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
SWI + +H F+ G +S ++I L I K+ +
Sbjct: 648 YSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGY 689
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 196/396 (49%), Gaps = 44/396 (11%)
Query: 100 KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM 159
KD W ++ + +G++ AR++FD++P + A+ A++ Y + F DL+ SM
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
R +A N T + +AC R G +H + G D+ + ++I +Y R
Sbjct: 92 LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA--------------------YRLFER 259
A VF+ M RD V+WN++++GY ++G A L
Sbjct: 152 GPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL 211
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIE-----------------------LFNMMPEKDD 296
+ + T I + + LE++ E +F+ MP ++D
Sbjct: 212 LAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND 271
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR-PNQLTLSSVLSASAATATLNQGSQIHA 355
VTW+A+I GFV ++ EAF F +ML + + + +++S L A+ A L+ G+Q+HA
Sbjct: 272 VTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHA 331
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
+ K + +D++ NSL+S+Y+K G + +A F I ++ +SY +++SG QNG EE
Sbjct: 332 LIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEE 391
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
A +F+KM+ + P+ T +S++ AC+H+ ++ G
Sbjct: 392 AFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHG 427
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 8/252 (3%)
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
KD W + S+G L + ++F+ +P D + A+I + + A + M
Sbjct: 32 KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
LR V PN+ T VL A +A L G IHAH + +D+ + +L+ LY +C
Sbjct: 92 LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE-GLVPNQITFLSVLS- 440
A +F + R++V++N+M++G+A +G+ A+ M+D GL PN T +S+L
Sbjct: 152 GPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL 211
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY---ACMVDILGRAGSLAEAIDLINSMTFE 497
H L + I+ ++ +E E ++D+ + L A + + M
Sbjct: 212 LAQHGALFQGTSIHAYCLRAC--LEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR 269
Query: 498 PPPGVWGALLGA 509
W AL+G
Sbjct: 270 NDV-TWSALIGG 280
>gi|15238469|ref|NP_200768.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170472|sp|Q9FGR2.1|PP436_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g59600
gi|10177776|dbj|BAB11040.1| unnamed protein product [Arabidopsis thaliana]
gi|71143062|gb|AAZ23922.1| At5g59600 [Arabidopsis thaliana]
gi|332009827|gb|AED97210.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 268/449 (59%), Gaps = 8/449 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+V Y + G+V++AR++FD+MP++++ M+ + +++ D F M + G+ +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ + L +A G +H LV +F ++ D + +S+I MY + G + A KVFS
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEK 283
+ ++D V +N++ISGY +N + +EA L + M D ++W +I+GFS N EK
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 284 SIELFNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
E+ +M + D V+WT+IISG V+N Q E+AF F +ML + PN T+ ++L
Sbjct: 237 VSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLP 296
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A A + G +IH + V +E ++++L+ +Y KCG + +A +F ++ V+
Sbjct: 297 ACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVT 356
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+NSMI +A +GL ++A+ LF +M+ G + +TF ++L+AC+H GL + G F M+
Sbjct: 357 FNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQ 416
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
Y I P EHYACMVD+LGRAG L EA ++I +M EP VWGALL A R H N++LA
Sbjct: 417 NKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIG 548
++AA+HL ELEP+++ ++L+ LY+ G
Sbjct: 477 RIAAKHLAELEPENSGNGLLLTSLYANAG 505
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 199/497 (40%), Gaps = 128/497 (25%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI-SGY 81
+ +A ++F MP R+ MI R G + E+ + + M ++D + +A I
Sbjct: 67 VLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREM---YKDGLKLDAFIVPSL 123
Query: 82 LKVGRC---EEAARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
LK R E ++ +V E D S++D Y K G V AR++F + E+++
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL 183
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V + AM+ GY ++ +L M+
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMK--------------------------------- 210
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS----KRDAVSWNSLISGYVHNGE 249
G D+I N++I+ + + ++ +++ +M K D VSW S+ISG VHN +
Sbjct: 211 --LLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQ 268
Query: 250 IEEAYRLFERM--------------------------PGKDFVSWTTMITG--------- 274
E+A+ F++M GK+ + +++TG
Sbjct: 269 NEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGY-SVVTGLEDHGFVRS 327
Query: 275 -----FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+ G + +++ LF P+K VT+ ++I + N+ ++A F +M +
Sbjct: 328 ALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKL 387
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ LT +++L+A + HA + + + +QN YRI
Sbjct: 388 DHLTFTAILTACS-----------HAGLTDLGQNLFLLMQNK--------------YRIV 422
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
++ Y M+ + G EA + + M+ E P+ + ++L+AC + G +E
Sbjct: 423 PRLEH-----YACMVDLLGRAGKLVEAYEMIKAMRME---PDLFVWGALLAACRNHGNME 474
Query: 450 EGFIYFKSMKTLYNIEP 466
I + K L +EP
Sbjct: 475 LARI---AAKHLAELEP 488
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%)
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+G +HAH+V + I LV+ Y +CG V+DA ++F + +R+I MI A
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+NG +E+L+ FR+M +GL + S+L A
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA 126
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 194/669 (28%), Positives = 334/669 (49%), Gaps = 86/669 (12%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA 104
+ F++ G +A +L+ MP + ++V +N +ISGY+K G EA ++F+ MVE+ V
Sbjct: 54 VGNFLKNGELSQARQLFEKMPHK--NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVT 111
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMP----------------------------------- 129
W ++ GY + + EA E+F +M
Sbjct: 112 WTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQII 171
Query: 130 ----EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+ ++ +VD Y K + + LF M +S T + A
Sbjct: 172 KLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE----IDSFTFAAVLCANIGLDDIV 227
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G Q+H V + F +++ + N+++ Y + + +A K+F M ++D VS+N +ISGY
Sbjct: 228 LGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYA 287
Query: 246 HNGEIEEAYRLFERMP--------------------------GKDFVSWTTMITG----- 274
+G+ + A+ LF + G+ + T + T
Sbjct: 288 WDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 347
Query: 275 --------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
++ G E++ +F + + V WTA+IS +V YEE + F +M +
Sbjct: 348 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 407
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
V +Q T +S+L ASA+ A+L+ G Q+H+ ++K S+V ++L+ +Y+KCG++ DA
Sbjct: 408 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 467
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+ F + +RNIVS+N+MIS +AQNG E L F++M GL P+ ++FL VLSAC+H G
Sbjct: 468 QTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG 527
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
LVEEG +F SM +Y ++P EHYA +VD+L R+G EA L+ M +P +W ++
Sbjct: 528 LVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSV 587
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEP-DSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
L A R H N +LA+ AA L +E A PYV +S++Y+ G+ + ++V + + +
Sbjct: 588 LNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGV 647
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLERD 625
+K P SW+ +K + H+F A + ++EI + ++K +E + K D S D
Sbjct: 648 KKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGY-KPDTSCALHNED 706
Query: 626 WSYTADNIK 634
+ +++K
Sbjct: 707 EKFKVESLK 715
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 247/492 (50%), Gaps = 36/492 (7%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+ SN + +LK G +A ++FE M K+ V+ M+ GY K G + EAR++FD M
Sbjct: 46 DTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMV 105
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E+ V WT ++ GY +++ F++ F+LF+ M+R G + +T L C + Q
Sbjct: 106 ERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQ 165
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
V + + G+D +I+GN+++ Y + +D A ++F M + D+ ++ +++ + +
Sbjct: 166 VQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDD 225
Query: 250 IEEAYRLFERMPGKDFVSWTTMITG-----FSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
I ++ + +FV W ++ +S ++ + +LF+ MPE+D V++ IIS
Sbjct: 226 IVLGQQIHSFVIKTNFV-WNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIIS 284
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G+ + +++ AF F E+ Q +++LS ++ T G QIHA + +S
Sbjct: 285 GYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADS 344
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
++ + NSLV +Y+KCG +A IFTN+ R+ V + +MIS + Q G EE L LF KM+
Sbjct: 345 EILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR 404
Query: 425 DEGLVPNQITFLSVLSACN-----------HVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
++ +Q TF S+L A H +++ GF + N+ G +
Sbjct: 405 QASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGF--------MSNVFSG----SA 452
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLG--AGRTHLNLDLAKLAAQHLMEL 529
++D+ + GS+ +A+ M P + W A++ A L L L
Sbjct: 453 LLDVYAKCGSIKDAVQTFQEM---PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 509
Query: 530 EPDSATPYVVLS 541
+PDS + VLS
Sbjct: 510 QPDSVSFLGVLS 521
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 171/356 (48%), Gaps = 47/356 (13%)
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ + GFD D N + + + G + +A ++F M ++ VS N +ISGYV +G + EA
Sbjct: 38 IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 97
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM----PEKDDVTWTAIISG---- 305
+LF+ M + V+WT +I G+S +++ ELF M E D VT+ ++SG
Sbjct: 98 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 157
Query: 306 -------------------------------FVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+ + + + A + F EM D T
Sbjct: 158 EMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEID----SFTF 213
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
++VL A+ + G QIH+ V+K N +V + N+L+ YSK +V+DA ++F + E
Sbjct: 214 AAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPE 273
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-I 453
++ VSYN +ISG+A +G + A +LFR+++ Q F ++LS ++ E G I
Sbjct: 274 QDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQI 333
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
+ +++ T + E + +VD+ + G EA + ++T W A++ A
Sbjct: 334 HAQTIVTTADSEILVGN--SLVDMYAKCGKFEEAEMIFTNLTHRSAVP-WTAMISA 386
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 257/452 (56%), Gaps = 32/452 (7%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD---------------- 233
VH V + G D +GN++I Y + G +A KVF M +RD
Sbjct: 150 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGE 209
Query: 234 ---------------AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
VSWN+++ GY GE+E A+ LF+RMP ++ VSW+TM++G+ K
Sbjct: 210 LAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKK 269
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G+LE + +F+ MP K+ VTWT ++S +EA + F +M V + + S+L
Sbjct: 270 GDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSIL 329
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF-TNIDERNI 397
+A A + +L+ G +IH +V K N+ + N+L+ ++ KCG V A +F T +++
Sbjct: 330 AACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDS 389
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
VS+NS+I GFA +G G++AL LF +MK +G P+ +T ++VLSAC H+G V+EG +F +
Sbjct: 390 VSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSN 449
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
M+ Y I P EHY CM+D+LGR G + EA+DLI SM +EP +WG+LL A R H N++
Sbjct: 450 MERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVE 509
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
A++A L +L+P +A Y VLS++Y+ G+ D + RM+ K +K+ G SW+ L
Sbjct: 510 YAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELN 569
Query: 578 DKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+ H F G + D +I + +S K
Sbjct: 570 ETFHEFTVGDRKHQDSDQISEMVDRLSSHVKH 601
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 4/257 (1%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA+I A N +A ++F MP R+ VS+ + VR G +L+ MP +
Sbjct: 167 NALIDAYSKNG-GFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEK-- 223
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+V N ++ GY K G E A +F+ M E++VV+W +MV GYCKKG + AR IFDKMP
Sbjct: 224 DTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMP 283
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
KN+V WT MV + ++ LF M+ + + + + AC G +
Sbjct: 284 SKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKR 343
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNG 248
+H V + + N++I M+ + G ++ A+ VF + ++D+VSWNS+I G+ +G
Sbjct: 344 IHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHG 403
Query: 249 EIEEAYRLFERMPGKDF 265
++A LF +M + F
Sbjct: 404 HGDKALELFAQMKQQGF 420
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 294/559 (52%), Gaps = 48/559 (8%)
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
AAR A + D+ ++VD Y K A +F +MP ++VVAW AM+ GY
Sbjct: 154 HAAR---AGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGK 210
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD----II 204
+ D L M+ A N+ TL L + +G VH R +D ++
Sbjct: 211 YSDTIACLLLMQ-DDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVL 269
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK- 263
+G +++ MY + G + A++VF M+ R+ V+W++L+ G+V G + EA+ LF+ M +
Sbjct: 270 VGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQG 329
Query: 264 ---------------------------------------DFVSWTTMITGFSSKGNLEKS 284
D + ++++ ++ G ++++
Sbjct: 330 LCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQA 389
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
LF+ M KD V+++A++SG+V N + +EAFR F +M +V+P+ T+ S++ A +
Sbjct: 390 TTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHL 449
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
A L G H V+ + S+ SI N+L+ +Y+KCG + + +IF + R+IVS+N+MI
Sbjct: 450 AALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMI 509
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
+G+ +GLG+EA LF MK + P+ +TF+ ++SAC+H GLV EG +F M Y I
Sbjct: 510 AGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGI 569
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
P EHY MVD+L R G L EA I M + VWGALLGA R H N+DL K +
Sbjct: 570 TPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSS 629
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
+ +L P+ +V+LS+++S G+ + VR+ +K + +KSPGCSWI + +H F+
Sbjct: 630 MIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFI 689
Query: 585 AGRKSCLDLKEIEVTLQTI 603
G +S EI L I
Sbjct: 690 GGDRSHAQSSEIYQELDNI 708
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 217/475 (45%), Gaps = 65/475 (13%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TAL++ S A +F MP R+ V++ AM+ G+ G + + + M +D
Sbjct: 168 TALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLM----QD 223
Query: 71 SVCSNA--LIS--------GYLKVGRCEEA--ARIFEAMVEKDVVAWGS-MVDGYCKKGR 117
NA L++ G L GR A R KD V G+ ++D Y K G
Sbjct: 224 DHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGH 283
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT-LTILFE 176
++ A +F+ M +N V W+A+V G++ + F LF M G+ F S T +
Sbjct: 284 LVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALR 343
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
AC G Q+H L+++ G D+ GNS+++MY + G +D+A +F M +D VS
Sbjct: 344 ACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVS 403
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITG------------------ 274
+++L+SGYV NG+ +EA+R+F +M D + ++I
Sbjct: 404 YSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVI 463
Query: 275 -----------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
++ G ++ S ++F++MP +D V+W +I+G+ + +EA
Sbjct: 464 VRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATA 523
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ-IHAHVVKMNMESDVSIQNSLVSLY 376
F++M + P+ +T ++SA + + + +G + H K + + +V L
Sbjct: 524 LFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLL 583
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN----GLGEEALNLFRKMKDEG 427
++ G + +AY+ + + V + G + LG++ ++ +++ EG
Sbjct: 584 ARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEG 638
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 220/492 (44%), Gaps = 62/492 (12%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + AR +FD++P + + A++ Y RR N+ T +
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+AC R VH +R G D+ + +++ +Y + A VF M RD V
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196
Query: 236 SWNSLISGYVHNGEIEE---------------AYRLFERMP----------GKDFVSW-- 268
+WN++++GY +G+ + A L +P G+ ++
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSV 256
Query: 269 ---------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
T ++ ++ G+L + +F M +++VTW+A++ GFV +
Sbjct: 257 RACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRML 316
Query: 314 EAFRWFIEMLRKDVR-PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EAF F +ML + + + +++S L A A + L G Q+HA + K + +D++ NSL
Sbjct: 317 EAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSL 376
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+S+Y+K G + A +F + ++ VSY++++SG+ QNG +EA +FRKM+ + P+
Sbjct: 377 LSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDV 436
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL-------- 484
T +S++ AC+H+ ++ G S+ + I ++D+ + G +
Sbjct: 437 ATMVSLIPACSHLAALQHGKCGHGSV-IVRGIASETSICNALIDMYAKCGRIDLSRQIFD 495
Query: 485 -AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
A D+++ T G+ G LG T L LD+ A EPD T ++ L
Sbjct: 496 VMPARDIVSWNTMIAGYGIHG--LGKEATALFLDMKHQAC------EPDDVT-FICLISA 546
Query: 544 YSVIGKKRDGNR 555
S G +G R
Sbjct: 547 CSHSGLVTEGKR 558
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 133/284 (46%), Gaps = 13/284 (4%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA--RWRDSVCSNALISG 80
I +A +F M +++ VSY+A+++G+V+ G EA ++ M A D +LI
Sbjct: 386 IDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPA 445
Query: 81 Y-----LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
L+ G+C + I + + + +++D Y K GR+ +R+IFD MP +++V+
Sbjct: 446 CSHLAALQHGKCGHGSVIVRGIASETSIC-NALIDMYAKCGRIDLSRQIFDVMPARDIVS 504
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ-VHGLV 194
W M+ GY ++ LFL M+ + +T L AC EG + H +
Sbjct: 505 WNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMA 564
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIE-- 251
++G + ++ + R GF+DEA + M K D W +L+ + I+
Sbjct: 565 HKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLG 624
Query: 252 -EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+ + +++ + ++ + FS+ G +++ E+ + E+
Sbjct: 625 KQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQ 668
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 279/507 (55%), Gaps = 31/507 (6%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A + A DV A ++ K + A ++F ++ N+ + + + G+ +
Sbjct: 36 AHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPD 95
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
F ++ +R G+ +++T L +AC + G+Q HG + R GFD D+ + NS++
Sbjct: 96 KSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLV 155
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTT 270
TMY LG +I+ A +F R+ D VSWT+
Sbjct: 156 TMYSTLG-------------------------------DIKSASYVFRRISCLDVVSWTS 184
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
M+ G+ G++ + +LF+ MPEK+ VTW+ +ISG+ N +++A + + + V N
Sbjct: 185 MVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHAN 244
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ + SV+++ A L G + H ++++ M ++ + +LV +Y++CG++ A +F
Sbjct: 245 ETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFD 304
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ R+ +S+ ++I+GFA +G E+AL F +M+ GL P +ITF +VLSAC+H GLVE
Sbjct: 305 QLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVER 364
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G F+SMK Y IEP EHY CMVD+LGRAG LAEA +N M +P +WGALLGA
Sbjct: 365 GLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGAC 424
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H N ++A+ A + L+EL+P+ + YV+LS++Y+ K + +R K + + K PG
Sbjct: 425 RIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPG 484
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIE 597
+ + KVH F G K+ ++++IE
Sbjct: 485 YTLFEMDGKVHKFTIGDKTHPEIQQIE 511
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 124/226 (54%), Gaps = 4/226 (1%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N+L++ Y +G + A+ +F + DVV+W SMV GY K G V AR++FDKMP
Sbjct: 147 DVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMP 206
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
EKN+V W+ M+ GY K F+ +L+ ++ G+ N + + +C G +
Sbjct: 207 EKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGER 266
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
H + R ++ILG +++ MY R G +D+A VF + RDA+SW +LI+G+ +G
Sbjct: 267 AHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGY 326
Query: 250 IEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
E+A F RM +++T +++ S G +E+ +ELF M
Sbjct: 327 AEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESM 372
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 145/303 (47%), Gaps = 22/303 (7%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
S+ +M+ I + + A ++F MP +N V+++ MI+G+ + F +A ELY + +
Sbjct: 181 SWTSMVAGYIKSG-DVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQS- 238
Query: 68 WRDSVCSN-----ALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRV 118
+ V +N ++I+ +G E R + ++ +++ ++VD Y + G +
Sbjct: 239 --EGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSI 296
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+A +FD++P ++ ++WT ++ G+ E + F M + G+ IT T + AC
Sbjct: 297 DKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSAC 356
Query: 179 GRFFRYREGVQVHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEANK-VFSMMSKRDAVS 236
G+++ + R + + + ++ + GR G + EA K V M K +A
Sbjct: 357 SHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPI 416
Query: 237 WNSLISG-YVH-NGEIEE--AYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE-LFNMM 291
W +L+ +H N EI E L E P + + +++ ++ N +++E + MM
Sbjct: 417 WGALLGACRIHKNSEIAERAGKTLIELKP--EHSGYYVLLSNIYARTNKWENVENIRQMM 474
Query: 292 PEK 294
E+
Sbjct: 475 KER 477
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD-AYRIFTNIDERN 396
LS + TL+ IHAH+++ + DV + L+S+ S N++D A ++F I N
Sbjct: 19 LSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISI-SINKNLLDYAAQVFYQIQNPN 77
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ YNS I GF+ + +++ + + + K GLVP+ +T+ ++ AC G ++ G
Sbjct: 78 LFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMG 132
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 288/537 (53%), Gaps = 39/537 (7%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
S++ YCK G + +AR++FD+M E+N+V+W ++ Y + F+ GF +F +M
Sbjct: 50 SVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKP 109
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
N T + G Q+H R G + + +I MY + G+++ A VF
Sbjct: 110 NGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVF 169
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF--------------------- 265
MS+++AV+W ++ GY +A LF +M +
Sbjct: 170 EKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELN 229
Query: 266 -----------------VSWTTMITGFSSK-GNLEKSIELFNMMPEKDDVTWTAIISGFV 307
VS T + F K NLE + + F + E +DV+W+A+I+G+
Sbjct: 230 FGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYC 289
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
++EEA + F + + V N T +S+ A +A A N G+Q HA +K ++ +
Sbjct: 290 QMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQH 349
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+++++++YS+CG + A R+F +ID+ + V++ ++I+G+A G EAL LFR+M+D G
Sbjct: 350 GESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCG 409
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ PN +TF++VL+AC+H GLV EG Y +SM + Y + +HY CMVDI RAG L EA
Sbjct: 410 VRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEA 469
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
++LI SM F P W LLG T+ NL++ +LAA++L +L+P+ Y+++ +LY+
Sbjct: 470 LELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASF 529
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
GK ++ VR + +RK CSWI +K KVH F+ G K +EI L+ ++
Sbjct: 530 GKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALN 586
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 183/392 (46%), Gaps = 45/392 (11%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M G++ + + LFEACG+ +G H + R + L NS++ MY + G
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------PGKDFVSWTTM 271
+ +A KVF M +R+ VSWN++IS Y NG ++ + +F M G ++ +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 272 I------------------TGFSSKGNLEKSIE--------------LFNMMPEKDDVTW 299
+ +G S ++ +I +F M EK+ V W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
T I+ G+ E+ +A F +M+ + V ++ S VL A A LN G QIH H+VK
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVK 240
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ +ES+VS+ LV Y KC N+ A + F I E N VS++++I+G+ Q G EEAL
Sbjct: 241 LGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKT 300
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMK-TLYNIEPGPEHYACMVDI 477
F ++ + N T+ S+ AC+ + G + ++K +L + G + M+ +
Sbjct: 301 FESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGE---SAMITM 357
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
R G L A + S+ +P W A++
Sbjct: 358 YSRCGRLDYATRVFESID-DPDAVAWTAIIAG 388
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 220/520 (42%), Gaps = 82/520 (15%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN--ALIS 79
S+ +A ++F M RN VS+ +I+ + G+F + ++ NM S +
Sbjct: 60 SLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLR 119
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGS----MVDGYCKKGRVIEAREIFDKMPEKNVVA 135
L E +I + + + S + + Y K G + A +F+KM EKN VA
Sbjct: 120 SLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVA 179
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT ++ GY + + D LF M G+ + +I+ +AC G Q+HG +
Sbjct: 180 WTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIV 239
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ G + ++ +G ++ Y + ++ A K F +S+ + VSW++LI+GY GE EEA +
Sbjct: 240 KLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALK 299
Query: 256 LFE--RMPGKDFVSWT-------------------------------------TMITGFS 276
FE R D S+T MIT +S
Sbjct: 300 TFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYS 359
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G L+ + +F + + D V WTAII+G+ EA + F M VRPN +T +
Sbjct: 360 RCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIA 419
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
VL+A + + + +G Q L S+ S Y + T ID
Sbjct: 420 VLTACSHSGLVIEGRQY------------------LESMSSN-------YGVATTIDH-- 452
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
Y+ M+ +++ G +EAL L R M P+ +++ +L C +E G +
Sbjct: 453 ---YDCMVDIYSRAGFLQEALELIRSMP---FSPDAMSWKCLLGGCWTYRNLEIGEL--- 503
Query: 457 SMKTLYNIEP-GPEHYACMVDILGRAGSLAEAIDLINSMT 495
+ + L+ ++P Y M ++ G EA ++ M
Sbjct: 504 AAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMA 543
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 155/356 (43%), Gaps = 53/356 (14%)
Query: 2 ADRTSASYNAMITALINN---NCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEA 57
A R+ NA + I+N C E E +F M +NAV++ ++ G+ + +A
Sbjct: 137 AIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDA 196
Query: 58 EELY---VNMPARWRDSVCSNALISGY----LKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
L+ VN + V S L + L GR + I + +E +V +VD
Sbjct: 197 LALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGR-QIHGHIVKLGLESEVSVGTPLVD 255
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K + A + F+ + E N V+W+A++ GY ++ FE+ F S+R + NS T
Sbjct: 256 FYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFT 315
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
T +F+AC + G Q H + +++ITMY R G +D A +VF +
Sbjct: 316 YTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESID 375
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMP--------------------------GKD 264
DAV+W ++I+GY + G EA +LF RM G+
Sbjct: 376 DPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQ 435
Query: 265 FVS--------------WTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISG 305
++ + M+ +S G L++++EL MP D ++W ++ G
Sbjct: 436 YLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 285/532 (53%), Gaps = 48/532 (9%)
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
D E NV A+ A++ G++ E+GF+ + MR G+ + T +AC +
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK 156
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
++HGL+ +FG + D+ +G++++ Y + G M+ A F + RD V WN++++GY
Sbjct: 157 ---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITG----FSSKGNL-------------------- 281
G+ E F RM + V +TG F+ G+L
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 282 ---------------EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
E ++E+F MM EKD +W +I+S ++ R ML
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG 333
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD------VSIQNSLVSLYSKCG 380
++P+ +T+++VL A + A L G +IH +++ + D V ++N+++ +Y+KCG
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
++ DA+ +F + +++ S+N MI G+ +G G EAL +F +M + L P+++TF+ VLS
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLS 453
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC+H G V +G + MK+ Y++ P EHY C++D+LGRAG L EA +L +M E P
Sbjct: 454 ACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANP 513
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
VW ALL A R H + LA++AAQ + ELEP+ YV++S++Y +G+ + VR
Sbjct: 514 VVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTM 573
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+ + +RK+PGCSWI LK+ VH+F++ ++ + I L +++ E +
Sbjct: 574 RQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARLXEHGY 625
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 214/509 (42%), Gaps = 89/509 (17%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGRCEE-AARI 93
N ++ A+I+GF+ G E E Y M D I L V ++ +
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIKKIHGLL 162
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
F+ +E DV ++V+ Y K G + A+ F+++P ++VV W AMV+GY ++ FE
Sbjct: 163 FKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVL 222
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
+ F M + + T+T G +HG + G+D + + NS+I MY
Sbjct: 223 ETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMY 282
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWT 269
G+ +++A ++F MM ++D SWNS++S + G+ + RL +RM G D V+ T
Sbjct: 283 GKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVT 342
Query: 270 TMITG-----------------------------------------FSSKGNLEKSIELF 288
T++ ++ G++ + +F
Sbjct: 343 TVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVF 402
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
M KD +W +I G+ + EA F M ++P+++T VLSA + ++
Sbjct: 403 ERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVS 462
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
QG +N LV + SK Y + I+ Y +I
Sbjct: 463 QG------------------RNFLVQMKSK-------YDVAPTIEH-----YTCVIDMLG 492
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
+ G +EA L M E N + + ++L+AC L + + + + ++ +E P
Sbjct: 493 RAGQLDEAYELALTMPIEA---NPVVWRALLAACR---LHKHAVLAEVAAQRVFELE--P 544
Query: 469 EH---YACMVDILGRAGSLAEAIDLINSM 494
EH Y M ++ G G E +++ ++M
Sbjct: 545 EHCGSYVLMSNVYGAVGRYEEVLEVRHTM 573
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 166/376 (44%), Gaps = 40/376 (10%)
Query: 30 FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALISGYL 82
F +P+R+ V + AM+ G+ + G F E + M P+R+ S + G L
Sbjct: 194 FEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDL 253
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
GR + + + V S++D Y K + +A EIF+ M EK++ +W ++V
Sbjct: 254 NNGRIIHGFAM-KMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSV 312
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG--LVSRFGFD 200
+ + + L M G+ + +T+T + AC G ++HG +VS G D
Sbjct: 313 HEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 372
Query: 201 Y----DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
D++L N++I MY + G M +A+ VF MS +D SWN +I GY +G EA +
Sbjct: 373 GKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEM 432
Query: 257 FERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFV 307
F RM D V++ +++ S G + + M K DV +T +I
Sbjct: 433 FSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLG 492
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
Q +EA+ + M + N + ++L+A ++H H V ++V+
Sbjct: 493 RAGQLDEAYELALTM---PIEANPVVWRALLAA----------CRLHKHAVL----AEVA 535
Query: 368 IQNSLVSLYSKCGNVV 383
Q CG+ V
Sbjct: 536 AQRVFELEPEHCGSYV 551
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 205/653 (31%), Positives = 329/653 (50%), Gaps = 65/653 (9%)
Query: 9 YNAMITALINNNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
+N ++TA ++ + A +F +P R+ VS+ A++ G EA L M A+
Sbjct: 28 WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQ 87
Query: 68 WRDSVCSNALISGYL----KVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRV 118
+ SN G V R +++ K +V A +++D Y K GRV
Sbjct: 88 ---GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRV 144
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF--- 175
+AR++FD MPE+N V+W A++ GY + +LFL M R G+A + T L
Sbjct: 145 RDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAV 204
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDA 234
E F + Q+HG + ++G + + N+ IT Y + G + ++ ++F + RD
Sbjct: 205 EGPSCFLMH----QLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDL 260
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVSWTTMITGFSSKGN--------- 280
+SWN+++ Y HNG +EA + F RM + D S+T++I+ S G+
Sbjct: 261 ISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIH 320
Query: 281 ------------------------------LEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+E + + FN + KD V+W ++++G+ +
Sbjct: 321 GLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHG 380
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+A ++F M ++VR ++ S+ L +S+ A L G QIH V+ S+ + +
Sbjct: 381 LSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSS 440
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SL+ +YSK G + DA + F D+ + V +N+MI G+AQ+G E LF +M
Sbjct: 441 SLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPL 500
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+ ITF+ ++++C+H GLV+EG +M+T Y + EHYAC VD+ GRAG L +A L
Sbjct: 501 DHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKL 560
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I+SM FEP VW LLGA R H N++LA A HL EP + YV+LS +YS +G
Sbjct: 561 IDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMW 620
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
D V+ K + + K PG SWI +K++VH F A KS + EI L+ +
Sbjct: 621 SDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 204/411 (49%), Gaps = 49/411 (11%)
Query: 90 AARIFEAMVEKDVVA---WGSMVDGYCKKGR--VIEAREIFDKMPEKNVVAWTAMVDGYM 144
AAR ++++ V A W ++ Y + + AR +FD++P ++ V+W A++
Sbjct: 10 AARSHASLLKSGVAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQA 69
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
+ + L +M G+A N+ L + R G Q+ L + G ++
Sbjct: 70 ASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVF 129
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK- 263
++++ +Y + G + +A +VF M +R+ VSWN+LI+GY +G++ A LF M +
Sbjct: 130 AASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREG 189
Query: 264 ------DFVSWTT-------------------------------MITGFSSKGNLEKSIE 286
F S T IT +S G+L+ S
Sbjct: 190 LAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRR 249
Query: 287 LFNMMPE-KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSA-SAA 343
+F+ + + +D ++W A++ + +N +EA ++F+ M+++ V P+ + +S++S+ S
Sbjct: 250 IFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEH 309
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN---VVDAYRIFTNIDERNIVSY 400
+QG IH V+K +E + N+L+++Y++ + DAY+ F ++ ++ VS+
Sbjct: 310 GHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSW 369
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
NSM++G++Q+GL +AL FR M E + ++ F + L + + + +++ G
Sbjct: 370 NSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLG 420
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 257/475 (54%), Gaps = 31/475 (6%)
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
R +FD + N V W M+ Y + E L+ M + NS T L +AC
Sbjct: 64 RVVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSAL 123
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+ E Q+H + + GF ++ NS++ +Y A+S
Sbjct: 124 SAFEETQQIHAHIIKRGFGLEVYATNSLLRVY--------------------AIS----- 158
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
G I+ A+ LF ++P +D VSW MI G+ GNL+ + ++F MPEK+ ++WT
Sbjct: 159 ------GNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTT 212
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+I GFV ++EA +ML ++P+ +TLS LSA A L QG IH ++ K
Sbjct: 213 MIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGKWIHTYIEKNE 272
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
++ D + L +Y KCG + A +F+ ++++ + ++ ++I G A +G G EAL+ F
Sbjct: 273 IKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAIIGGLAIHGKGREALDWFT 332
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
+M+ G+ PN ITF ++L+AC+H GL EEG F+SM ++YNI+P EHY CMVD++GRA
Sbjct: 333 QMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMGRA 392
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L EA + I SM +P +WGALL A + H + +L K + L+EL+PD + Y+ L+
Sbjct: 393 GLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIELDPDHSGRYIHLA 452
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
+Y+ G+ RVR + K + + PGCS I L VH F AG S ++EI
Sbjct: 453 SIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSITLNGVVHEFFAGDGSHPHIQEI 507
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 194/422 (45%), Gaps = 21/422 (4%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGM-----FYEAEELYVN 63
+N M+ A N+N EA + + N+V + + F+ + F E ++++ +
Sbjct: 78 WNTMLRAYSNSNDP--EAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIHAH 135
Query: 64 MPARW--RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
+ R + +N+L+ Y G + A +F + +D+V+W M+DGY K G + A
Sbjct: 136 IIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMA 195
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
+IF MPEKNV++WT M+ G++++ ++ L M G+ +SITL+ AC
Sbjct: 196 YKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGL 255
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+G +H + + D +LG + MY + G M++A VFS + K+ +W ++I
Sbjct: 256 GALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAII 315
Query: 242 SGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE---- 293
G +G+ EA F +M + +++T ++T S G E+ LF M
Sbjct: 316 GGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNI 375
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
K + + + + R FIE + V+PN ++L+A G +I
Sbjct: 376 KPSMEHYGCMVDLMGRAGLLKEAREFIESM--PVKPNAAIWGALLNACQLHKHFELGKEI 433
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
+++++ + + L S+Y+ G R+ + I R ++++ S NG+
Sbjct: 434 GKILIELDPDHSGRYIH-LASIYAAAGEWNQVVRVRSQIKHRGLLNHPG-CSSITLNGVV 491
Query: 414 EE 415
E
Sbjct: 492 HE 493
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 37/267 (13%)
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
NL + +F+ + + V W ++ + N+ E A + +ML V N T +L
Sbjct: 59 NLAYTRVVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLK 118
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV----------------- 382
A +A + + QIHAH++K +V NSL+ +Y+ GN+
Sbjct: 119 ACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVS 178
Query: 383 ----VD----------AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
+D AY+IF + E+N++S+ +MI GF + G+ +EAL+L ++M G+
Sbjct: 179 WNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGI 238
Query: 429 VPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYAC-MVDILGRAGSLAE 486
P+ IT LSAC +G +E+G +I+ K I+P C + D+ + G + +
Sbjct: 239 KPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPV---LGCVLTDMYVKCGEMEK 295
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTH 513
A+ L+ S + W A++G H
Sbjct: 296 AL-LVFSKLEKKCVCAWTAIIGGLAIH 321
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 279/494 (56%), Gaps = 32/494 (6%)
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
++ V DV S++ Y G + A ++F + EK+VV+W +M++G+++ +
Sbjct: 160 IKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 219
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
+LF M + + +T+ + AC + G +V + + ++ L N+++ MY
Sbjct: 220 ELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMY 279
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMIT 273
+ G IE+A RLF+ M KD V+WTTM+
Sbjct: 280 TKCG-------------------------------SIEDAKRLFDAMEEKDNVTWTTMLD 308
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM-LRKDVRPNQL 332
G++ + E + E+ N MP+KD V W A+IS + N + EA F E+ L+K+++ NQ+
Sbjct: 309 GYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQI 368
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
TL S LSA A L G IH+++ K ++ + + ++L+ +YSKCG++ A +F ++
Sbjct: 369 TLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSV 428
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
++R++ +++MI G A +G G EA+++F KM++ + PN +TF +V AC+H GLV+E
Sbjct: 429 EKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE 488
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
F M++ Y I P +HYAC+VD+LGR+G L +A+ I +M P VWGALLGA +
Sbjct: 489 SLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 548
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H NL LA++A L+ELEP + +V+LS++Y+ GK + + +R ++ ++K PGCS
Sbjct: 549 HANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCS 608
Query: 573 WIILKDKVHLFLAG 586
I + +H FL+G
Sbjct: 609 SIEIDGMIHEFLSG 622
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 187/402 (46%), Gaps = 51/402 (12%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP------------------AR 67
A ++F T+ ++ VS+ +MI GFV++G +A EL+ M A+
Sbjct: 187 ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAK 246
Query: 68 WRD-----SVCS--------------NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
RD VCS NA++ Y K G E+A R+F+AM EKD V W +M
Sbjct: 247 IRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM 306
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFN 167
+DGY ARE+ + MP+K++VAW A++ Y + + +F ++ + + N
Sbjct: 307 LDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLN 366
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
ITL AC + G +H + + G + + +++I MY + G +++A +VF+
Sbjct: 367 QITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFN 426
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK 283
+ KRD W+++I G +G EA +F +M + V++T + S G +++
Sbjct: 427 SVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 486
Query: 284 SIELFNMMPEK-----DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
+ LF M +D + I+ + E+A + FIE + + P+ ++L
Sbjct: 487 AESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVK-FIEAM--PIPPSTSVWGALL 543
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
A A L+ ++++ +D L ++Y+K G
Sbjct: 544 GACKIHANLSLAEMACTRLLELEPRND-GAHVLLSNIYAKSG 584
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 127/228 (55%), Gaps = 9/228 (3%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR--P 329
I SS +LE + ++F+ +P+ + TW +I + + + F++M+ + + P
Sbjct: 72 IAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYP 131
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N+ T ++ A+A ++L+ G +H +K + SDV + NSL+ Y CG++ A ++F
Sbjct: 132 NKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 191
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
T I E+++VS+NSMI+GF Q G ++AL LF+KM+ E + + +T + VLSAC + +E
Sbjct: 192 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLE 251
Query: 450 EG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
G Y + + N+ M+D+ + GS+ +A L ++M
Sbjct: 252 FGRRVCSYIEENRVNVNLTLA----NAMLDMYTKCGSIEDAKRLFDAM 295
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 303/551 (54%), Gaps = 22/551 (3%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPAR---WRDS-----VCSNALISGYLKVGRCEEAARIF 94
A+I +V +G ++A ++ +M W D V + L VG R
Sbjct: 153 AIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHG-RAL 211
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
+ ++ S++ Y G+V AR++F+ M +++VV+W M+ G+ + E+
Sbjct: 212 VSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALA 271
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
+F SM + +S T+ +CG G++VH LV + I + N+++ MY
Sbjct: 272 VFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYS 331
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTT 270
R G +DEA+ VF+ ++D ++W S+I+GY+ NG + A L M + V+ +
Sbjct: 332 RCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLAS 391
Query: 271 MITGFSS------KGN-LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+++ +S K N + S ++F +K V W A++SG ++NE EA F ML
Sbjct: 392 LLSACASLCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSML 451
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
++V N T +SV+ A A A L Q +H+++V+ S +++ L+ +YSKCG++
Sbjct: 452 IEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLD 511
Query: 384 DAYRIFTNI--DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
A++IF I E++I+ ++ +I+G+ +G GE A+ LF +M G+ PN+ITF SVL A
Sbjct: 512 YAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHA 571
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C+H GLV++G FK M Y P P HY C+VD+LGRAG L EA DLI SM F+
Sbjct: 572 CSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHS 631
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
+WGALLGA H N++L ++AA+ L ELEP+S Y++L+++Y+ +G+ +D VR
Sbjct: 632 IWGALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMS 691
Query: 562 LKRIRKSPGCS 572
+RK+P S
Sbjct: 692 KIGLRKTPAQS 702
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 188/417 (45%), Gaps = 80/417 (19%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN-MPARWRD---SVCSNALISGY 81
A ++F M R+ VS+ MI+G+ + G EA ++ + M AR ++ S GY
Sbjct: 238 ARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGY 297
Query: 82 LKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
LK E ++ + + +++ + ++VD Y + G + EA +F + EK+V+ WT
Sbjct: 298 LK--ELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWT 355
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
+M++GY+ + L +M+ G+ N++TL L AC
Sbjct: 356 SMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACA------------------ 397
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
S+ MY + + + +VF+ SK+ V WN+L+SG +HN EA LF
Sbjct: 398 ----------SLCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLF 447
Query: 258 ERM----------------PG-------------------KDFVSWTTMITG----FSSK 278
+ M P F+S +ITG +S
Sbjct: 448 KSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKC 507
Query: 279 GNLEKSIELFNMMP--EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G+L+ + ++F+ +P EKD + W+ +I+G+ + E A F +M+ ++PN++T +S
Sbjct: 508 GSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTS 567
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQ-NSLVSLYSKCGNVVDAYRIFTNI 392
VL A + ++ G + ++++ S + +V L + G + +AY + ++
Sbjct: 568 VLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSM 624
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK---MNMESDVSIQNSLVSLYSKCGN 381
K + N S+L AAT +LN+ +H H + ++ + + + + L Y+ CG
Sbjct: 73 KSLIANVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGC 132
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG-LVPNQITFLSVLS 440
V A ++F ++ + ++ +N++I + G +AL +F M G P++ TF V+
Sbjct: 133 VPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIK 192
Query: 441 ACNHVGLVEEGFI 453
AC+ + ++ G +
Sbjct: 193 ACSVMSMLNVGVL 205
>gi|347954452|gb|AEP33726.1| chlororespiratory reduction 21, partial [Aethionema cordifolium]
Length = 618
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 188/602 (31%), Positives = 316/602 (52%), Gaps = 23/602 (3%)
Query: 21 CSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVC 73
C I + A ++F MP RN V++ +++ G+V+ GM EA L +M P R S C
Sbjct: 6 CGILDDARKVFDRMPERNVVAWNSLMVGYVQNGMNEEAIRLLSDMMNEGIEPTRVTVSTC 65
Query: 74 SNALIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
+A G ++ G+ A I + E D + S+++ YCK G + A IFDKM EK+
Sbjct: 66 LSASAHMGGIEEGKQSHAIAIVNGL-ELDNILGTSILNFYCKVGLIECAEMIFDKMIEKD 124
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VV W ++ GY++ ED MR + F+ +T++ L A G Q+
Sbjct: 125 VVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAAAHTQDLNLGKQLQC 184
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
R + DI+ ++ + MY + G + +A KVF +D + WN+L++ Y + E
Sbjct: 185 YCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDSTVHKDLMLWNTLLAAYAESSHSGE 244
Query: 253 AYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIIS 304
A RLF M + +SW +I G + ++ +F + + ++WT +++
Sbjct: 245 ALRLFYEMQLESVTPNVISWNLIILSLLRXGQVTEAKXMFLQIQSTGISPNLISWTTLMN 304
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
G V N EEA +F +M +RPN + + LSA + A+L+ G IH ++++ S
Sbjct: 305 GLVQNGYSEEAIMYFKKMQESGLRPNPFSXTVALSACSNLASLHFGRSIHGYIIRNQWHS 364
Query: 365 -DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
VS++ SL+ +Y+KCG++ A R+F N + YN+MIS + G EEA+ L+R +
Sbjct: 365 GSVSLETSLLDMYAKCGDINKAERVFGNKLYSELPLYNAMISAYGLYGKVEEAITLYRDL 424
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
+ + P+ ITF ++LSACNH G V + F M + + ++P EHY MVD+ +G
Sbjct: 425 EALDIKPDNITFTNLLSACNHTGSVNQAIQIFTDMVSKHGMQPCLEHYGLMVDLFASSGE 484
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
+ EA+ ++ M +EP + +LL + +L +++L+E EPD++ YV +S+
Sbjct: 485 IEEALRIVKDMPYEPDARMIQSLLAYCKKEHKTELVDYLSKYLLESEPDNSGNYVTISNA 544
Query: 544 YSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL-----KDKVHLFLAGRKSCLDLKEIEV 598
Y+ G + ++R K K ++K PGCSWI + K++VH+F+A K+ L EIE+
Sbjct: 545 YAAGGNWEEVMKMREMMKEKGLKKKPGCSWIQVAGRQEKEEVHVFVANDKTHLKYNEIEM 604
Query: 599 TL 600
L
Sbjct: 605 ML 606
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 174/392 (44%), Gaps = 83/392 (21%)
Query: 110 DGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI 169
D Y K G + +AR++FD+MPE+NVVAW +++ GY++ E+ L M G+ +
Sbjct: 1 DMYGKCGILDDARKVFDRMPERNVVAWNSLMVGYVQNGMNEEAIRLLSDMMNEGIEPTRV 60
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T++ A EG Q H + G + D ILG SI+ Y ++G ++ A +F M
Sbjct: 61 TVSTCLSASAHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIECAEMIFDKM 120
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--------------------------GK 263
++D V+WN LISGYV G IE+A + M GK
Sbjct: 121 IEKDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAAAHTQDLNLGK 180
Query: 264 -------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
D VS +T + ++ G + + ++F+ KD + W +++ + +
Sbjct: 181 QLQCYCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDSTVHKDLMLWNTLLAAYAESS 240
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
EA R F EM + V PN ++ + +
Sbjct: 241 HSGEALRLFYEMQLESVTPNVISWNLI--------------------------------- 267
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDER----NIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
++SL + G V +A +F I N++S+ ++++G QNG EEA+ F+KM++
Sbjct: 268 -ILSLL-RXGQVTEAKXMFLQIQSTGISPNLISWTTLMNGLVQNGYSEEAIMYFKKMQES 325
Query: 427 GLVPNQITFLSVLSACN-----HVGLVEEGFI 453
GL PN + LSAC+ H G G+I
Sbjct: 326 GLRPNPFSXTVALSACSNLASLHFGRSIHGYI 357
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 286/542 (52%), Gaps = 41/542 (7%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++D Y K R +A +F + KNV +WT M+ + + F+ + F M G+
Sbjct: 16 LIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPG 75
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ ++I AC G + + G + + I+ +++++YG+LG +A VF
Sbjct: 76 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFL 135
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK------------------ 263
MS RD V+W+++++ Y NG EA LF +M P K
Sbjct: 136 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 195
Query: 264 ---------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
V T ++ + G +E + E F + EK+ V W+AI + +
Sbjct: 196 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYAR 255
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA--HVVKMNMESDV 366
N++ +A R M + + PN T SVL A AA A L QG +IH HV+ +ESDV
Sbjct: 256 NDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDV 315
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ +LV++YSKCGN+ A +F I ++V +NS+I+ AQ+G E+AL LF +M+ E
Sbjct: 316 YVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 375
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
GL P ITF SVL AC+H G++++G +F S + I P EH+ CMVD+LGRAG + +
Sbjct: 376 GLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVD 435
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
+ DL+ M FEP P W A LGA RT+ N+D A AA++L +L+P PYV+LS++Y+
Sbjct: 436 SEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAK 495
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKG 606
G+ D R+R +L K G SWI +KD+VH F++G + EI LQ ++K
Sbjct: 496 AGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKL 555
Query: 607 TK 608
K
Sbjct: 556 MK 557
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 162/357 (45%), Gaps = 41/357 (11%)
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
G+ + L N +I +Y + D+A VF + ++ SW +++ + N + + +
Sbjct: 4 LGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLF 63
Query: 257 FERM------PGKDFVS---------------------------------WTTMITGFSS 277
F M PG+ +S T +++ +
Sbjct: 64 FRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGK 123
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
G+ + +F M +D V W+A+++ + N EA F +M V PN++TL S
Sbjct: 124 LGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSG 183
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L A A+ L G+ +H V ++S V + +LV+LY KCG + A F I E+N+
Sbjct: 184 LDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNV 243
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
V+++++ + +A+N +A+ + +M EGL PN TF+SVL AC + +++G +
Sbjct: 244 VAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHER 303
Query: 458 MKTL-YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+ L +E +V++ + G+LA A ++ + + +W +L+ H
Sbjct: 304 IHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIA-HLDLVLWNSLIATNAQH 359
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 136/279 (48%), Gaps = 18/279 (6%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN--ALISGY- 81
+A +F M R+ V+++AM+ + R G EA L+ M D V N L+SG
Sbjct: 129 DAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDL---DGVAPNKVTLVSGLD 185
Query: 82 --LKVGRCEEAA----RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+G A R+ ++ VV ++V+ Y K GR+ A E F ++ EKNVVA
Sbjct: 186 ACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVA 245
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W+A+ Y + D D + M G+A NS T + +AC ++G ++H +
Sbjct: 246 WSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIH 305
Query: 196 RF--GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
G + D+ + +++ MY + G + A +F ++ D V WNSLI+ +G+ E+A
Sbjct: 306 VLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKA 365
Query: 254 YRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELF 288
LFERM +++T+++ S G L++ + F
Sbjct: 366 LELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHF 404
>gi|414873978|tpg|DAA52535.1| TPA: hypothetical protein ZEAMMB73_896450 [Zea mays]
gi|414873979|tpg|DAA52536.1| TPA: hypothetical protein ZEAMMB73_896450 [Zea mays]
Length = 701
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 191/578 (33%), Positives = 316/578 (54%), Gaps = 21/578 (3%)
Query: 38 AVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM 97
A +YAAM+ +R AE L+ PA R A++ GY K GR + A +F+AM
Sbjct: 116 ADAYAAMVASRLRERDLTRAEALFGAAPAAARGLYLDTAMLDGYAKAGRVDRARELFDAM 175
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
K+VV W SMV GY + GRV EARE+FD MPE+N +WT +V GY + + ++F
Sbjct: 176 PVKNVVTWTSMVSGYFRAGRVQEARELFDVMPERNDYSWTTVVQGYARNGMLREAREMFD 235
Query: 158 SMRRGGMAFNSITLTILFEA---CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
M + N + T + +A CG+ + E + + R + + N++I+ +
Sbjct: 236 RMPQR----NVVAWTAMVKAYVDCGQIQQAWELFDM--MPERNSYSW-----NAMISGFL 284
Query: 215 RLGFMDEANKVFSMMSKR--DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMI 272
+G + EA ++F M R + VSW ++++G +NG A F+RMP KD +W +I
Sbjct: 285 SIGKVAEAVQLFERMPHRHKNVVSWTTMVAGLANNGLACRAREFFDRMPAKDTAAWNAII 344
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
T +++ G L ++ LF+ M KD VTW+ II + NE+ EA F+ M V PN
Sbjct: 345 TVYANNGQLNEAQRLFDSMLAKDLVTWSTIIEAYSKNERKHEALNMFLLMRHSAVSPNIR 404
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
TL S+L S +T + Q IH V+ + S+ S+ N+L+++YS+ G+++ A+ F +
Sbjct: 405 TLISILVISESTVEVKQ---IHGLVIALGFLSETSLGNALLTMYSRSGDLMSAWFAFKRL 461
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
++++ +++ S++ FA +G G AL F +M G P+ TF +VLSAC HVGLV +G
Sbjct: 462 EQKDAITWTSIVQAFADHGCGYHALLGFAQMLRHGYKPSSTTFTAVLSACRHVGLVGKGR 521
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE-PPPGVWGALLGAGR 511
FKS+ +Y +EP EHY+C+VD+LGRAG + EA +L++ M + LLGA
Sbjct: 522 KMFKSIYHVYGLEPTIEHYSCLVDLLGRAGYVREAKELVDGMQQGMRDEAILATLLGACV 581
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
H +++A+ + L+ +P Y +L+++++ G + V + + +++PG
Sbjct: 582 VHNEVEVAREVGEDLVRFDPSGTGGYRLLANVFASHGMWDETANVWKVMRGSKAKRTPGF 641
Query: 572 SWIILKDKVHLFLAGRKSCLDLKEI-EVTLQTISKGTK 608
S I + + H+F + + EI E+ + TI+ K
Sbjct: 642 SQIEVNMRNHVFYSRDQEHPQCAEIYEMLIDTIAPQMK 679
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 142/277 (51%), Gaps = 4/277 (1%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R ++ AM+ A ++ I +A+E+F MP RN+ S+ AMI+GF+ G EA +L
Sbjct: 237 MPQRNVVAWTAMVKAYVDCG-QIQQAWELFDMMPERNSYSWNAMISGFLSIGKVAEAVQL 295
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R ++ V +++G G A F+ M KD AW +++ Y G++ E
Sbjct: 296 FERMPHRHKNVVSWTTMVAGLANNGLACRAREFFDRMPAKDTAAWNAIITVYANNGQLNE 355
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+ +FD M K++V W+ +++ Y K + + ++FL MR ++ N TL +
Sbjct: 356 AQRLFDSMLAKDLVTWSTIIEAYSKNERKHEALNMFLLMRHSAVSPNIRTLISILVISES 415
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ Q+HGLV GF + LGN+++TMY R G + A F + ++DA++W S+
Sbjct: 416 TVEVK---QIHGLVIALGFLSETSLGNALLTMYSRSGDLMSAWFAFKRLEQKDAITWTSI 472
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSS 277
+ + +G A F +M + +T T S
Sbjct: 473 VQAFADHGCGYHALLGFAQMLRHGYKPSSTTFTAVLS 509
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 289/539 (53%), Gaps = 49/539 (9%)
Query: 112 YCKKGRVIEAREIF-DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K ++ A IF D E NV A+ A++ G++ E+GF+ + MR G+ + T
Sbjct: 2 YSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFT 61
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+AC + ++HGL+ +FG + D+ +G++++ Y + G M+ A F +
Sbjct: 62 FPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP 118
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG----FSSKGNL----- 281
RD V WN++++GY G+ E F RM + V +TG F+ G+L
Sbjct: 119 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRI 178
Query: 282 ------------------------------EKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
E ++E+F MM EKD +W +I S
Sbjct: 179 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGD 238
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME------SD 365
++ R ML ++P+ +T+++VL A + A L G +IH +++ + D
Sbjct: 239 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 298
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
V ++N+++ +Y+KCG++ DA+ +F + +++ S+N MI G+ +G G EAL +F +M +
Sbjct: 299 VLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 358
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
L P+++TF+ VLSAC+H G V +G + MK+ Y++ P EHY C++D+LGRAG L
Sbjct: 359 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 418
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYS 545
EA +L +M E P VW ALL A R H + LA++AAQ + ELEP+ YV++S++Y
Sbjct: 419 EAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYG 478
Query: 546 VIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
+G+ + VR + + +RK+PGCSWI LK+ VH+F++ ++ + I L +++
Sbjct: 479 AVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNSLT 537
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 213/509 (41%), Gaps = 89/509 (17%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGRCEE-AARI 93
N ++ A+I+GF+ G E E Y M D I L V ++ +
Sbjct: 23 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIKKIHGLL 82
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
F+ +E DV ++V+ Y K G + A+ F+++P ++VV W AMV+GY ++ FE
Sbjct: 83 FKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVL 142
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
+ F M + + T+T + G +HG + G+D + + NS+I MY
Sbjct: 143 ETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMY 202
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWT 269
G+ +++A ++F MM ++D SWNS+ S + G+ + RL +RM G D V+ T
Sbjct: 203 GKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVT 262
Query: 270 TMITG-----------------------------------------FSSKGNLEKSIELF 288
T++ ++ G++ + +F
Sbjct: 263 TVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVF 322
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
M KD +W +I G+ + EA F M ++P+++T VLSA + ++
Sbjct: 323 ERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVS 382
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
QG +N L + SK Y + I+ Y +I
Sbjct: 383 QG------------------RNFLAQMKSK-------YDVAPTIEH-----YTCVIDMLG 412
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
+ G +EA L M E N + + ++L+AC L + + + + ++ +E P
Sbjct: 413 RAGQLDEAYELALTMPIEA---NPVVWRALLAACR---LHKHAVLAEVAAQRVFELE--P 464
Query: 469 EH---YACMVDILGRAGSLAEAIDLINSM 494
EH Y M ++ G G E +++ ++M
Sbjct: 465 EHCGSYVLMSNVYGAVGRYEEVLEVRHTM 493
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 165/376 (43%), Gaps = 40/376 (10%)
Query: 30 FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALISGYL 82
F +P+R+ V + AM+ G+ + G F E + M P+R+ + S + G L
Sbjct: 114 FEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDL 173
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
GR + + + V S++D Y K + +A EIF+ M EK++ +W ++
Sbjct: 174 NNGRIIHGFAM-KMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSV 232
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG--LVSRFGFD 200
+ + + L M G+ + +T+T + AC G ++HG +VS G D
Sbjct: 233 HEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 292
Query: 201 Y----DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
D++L N++I MY + G M +A+ VF M +D SWN +I GY +G EA +
Sbjct: 293 GKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEM 352
Query: 257 FERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFV 307
F RM D V++ +++ S G + + M K DV +T +I
Sbjct: 353 FSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLG 412
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
Q +EA+ + M + N + ++L+A ++H H V ++V+
Sbjct: 413 RAGQLDEAYELALTM---PIEANPVVWRALLAA----------CRLHKHAVL----AEVA 455
Query: 368 IQNSLVSLYSKCGNVV 383
Q CG+ V
Sbjct: 456 AQRVFELEPEHCGSYV 471
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 281/526 (53%), Gaps = 44/526 (8%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKNVVAWTAMVDGYMKVD- 147
A++ E +VV S+ + Y + R+ A F+++P ++N +W ++ GY K
Sbjct: 28 AKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKT 87
Query: 148 -CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
C+ D L+ MRR +S L +AC G+ +HGL + G D D +
Sbjct: 88 CCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVA 147
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF- 265
S++ MY +LG M+ A KVF + R++V W L+ GY+ + E +RLF M
Sbjct: 148 PSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLA 207
Query: 266 VSWTTMITGFSSKGN---------------------------------------LEKSIE 286
+ T+I + GN L+ + +
Sbjct: 208 LDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARK 267
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
LF +++ V WT +ISGF E+ EAF F +MLR+ + PNQ TL+++L + ++ +
Sbjct: 268 LFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGS 327
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L G +H ++++ +E D S + +Y++CGN+ A +F + ERN++S++SMI+
Sbjct: 328 LRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINA 387
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
F NGL EEAL+ F KMK + +VPN +TF+S+LSAC+H G V+EG+ F+SM Y + P
Sbjct: 388 FGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVP 447
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL 526
EHYACMVD+LGRAG + EA I++M +P WGALL A R H +DLA A+ L
Sbjct: 448 EEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 527 MELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
+ +EP+ ++ YV+LS++Y+ G N VR K +K RK G S
Sbjct: 508 LSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 179/384 (46%), Gaps = 38/384 (9%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS---------- 71
++ A ++F +P+RN+V + ++ G+++ E L+ M RD+
Sbjct: 159 TMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLM----RDTGLALDALTLI 214
Query: 72 ----VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
C N KVG+C I + +++ S++D Y K + AR++F+
Sbjct: 215 CLVKACGNVFAG---KVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET 271
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
++NVV WT ++ G+ K + + FDLF M R + N TL + +C R G
Sbjct: 272 SVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHG 331
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
VHG + R G + D + S I MY R G + A VF MM +R+ +SW+S+I+ + N
Sbjct: 332 KSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGIN 391
Query: 248 GEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM-------PEKDD 296
G EEA F +M ++ V++ ++++ S GN+++ + F M PE++
Sbjct: 392 GLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEH 451
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+ ++ + EA + FI+ + V+P ++LSA ++ +I
Sbjct: 452 --YACMVDLLGRAGEIGEA-KSFIDNM--PVKPMASAWGALLSACRIHKEVDLAGEIAEK 506
Query: 357 VVKMNMESDVSIQNSLVSLYSKCG 380
++ M E S+ L ++Y+ G
Sbjct: 507 LLSMEPEKS-SVYVLLSNIYADAG 529
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 195/422 (46%), Gaps = 71/422 (16%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS--KRDAVSWNSLISGY-- 244
QVH V GF+ +++LG+S+ Y + +D A F+ + KR+ SWN+++SGY
Sbjct: 25 QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSK 84
Query: 245 ----------------------------------------VHNGEIEEAYRLFERMPGKD 264
+ NG + + + D
Sbjct: 85 SKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDD 144
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+V+ +++ ++ G +E + ++F+ +P ++ V W ++ G++ + E FR F M
Sbjct: 145 YVA-PSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRD 203
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM--ESDVSIQNSLVSLYSKCGNV 382
+ + LTL ++ A G +H ++ + +SD +Q S++ +Y KC +
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY-LQASIIDMYVKCRLL 262
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+A ++F +RN+V + ++ISGFA+ EA +LFR+M E ++PNQ T ++L +C
Sbjct: 263 DNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSC 322
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPE----HYACMVDILGRAGSLAEAIDLINSMTFEP 498
+ +G + G KS+ Y I G E ++ +D+ R G++ A + + M P
Sbjct: 323 SSLGSLRHG----KSVHG-YMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMM---P 374
Query: 499 PPGV--WGALLGA----GRTHLNLD-LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
V W +++ A G LD K+ +Q+++ P+S T +V L S G +
Sbjct: 375 ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVV---PNSVT-FVSLLSACSHSGNVK 430
Query: 552 DG 553
+G
Sbjct: 431 EG 432
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 85/177 (48%), Gaps = 8/177 (4%)
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-- 393
++L+ + TLN Q+HA V+ E +V + +SL + Y + + A F I
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 394 ERNIVSYNSMISGFAQNGLG--EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+RN S+N+++SG++++ + L L+ +M+ + + + AC +GL+E G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 452 -FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
I+ +MK ++ +V++ + G++ A + + + +WG L+
Sbjct: 129 ILIHGLAMKN--GLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSV-LWGVLM 182
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 178/640 (27%), Positives = 324/640 (50%), Gaps = 77/640 (12%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVE--- 99
A+I + + G A L+ + D+V N++IS ++ G C EA +F M E
Sbjct: 185 ALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGV 244
Query: 100 ------------------------------------KDVVAWGSMVDGYCKKGRVIEARE 123
DV +++ Y K GR+ +A
Sbjct: 245 ASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGR 304
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F+ M ++ V+W ++ G ++ + + D + F M+ G + +++ L A GR
Sbjct: 305 VFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGN 364
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+G +VH R G D ++ +GN+++ MY + + F M ++D +SW ++I+G
Sbjct: 365 LLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAG 424
Query: 244 YVHNGEIEEAYRLFERMPGK--------------------------------------DF 265
Y N EA LF ++ K D
Sbjct: 425 YAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADI 484
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ ++ + G+++ + F + KD V+WT++I+ V+N EA F + +
Sbjct: 485 MLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQT 544
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+++P+ + + S LSA+A ++L +G +IH +++ + I +SLV +Y+ CG V ++
Sbjct: 545 NIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENS 604
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F ++ +R+++ + SMI+ +G G +A+ LF+KM D+ ++P+ ITFL++L AC+H
Sbjct: 605 RKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHS 664
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GL+ EG +F+ MK Y +EP PEHYACMVD+L R+ SL EA + +M +P +W A
Sbjct: 665 GLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCA 724
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA H N +L +LAA+ L++ + +++ Y ++S++++ G+ D VR++ K +
Sbjct: 725 LLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGL 784
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
+K+PGCSWI + +K+H F+A KS +I + L +K
Sbjct: 785 KKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTK 824
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 201/383 (52%), Gaps = 43/383 (11%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K G + +A ++FD+M E+ + +W A++ ++ + + +L+ MR G+A ++ T
Sbjct: 89 YGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTF 148
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS--MM 229
+ +ACG R G ++HG+ + G+ + + N++I MYG+ G + A +F MM
Sbjct: 149 PSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMM 208
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT-------------------- 269
K D VSWNS+IS +V G EA LF RM S T
Sbjct: 209 EKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGM 268
Query: 270 -------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+I ++ G +E + +F M +D V+W ++SG V NE
Sbjct: 269 GIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNE 328
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
Y +A +F +M +P+Q+++ ++++AS + L +G ++HA+ ++ ++S++ I N
Sbjct: 329 LYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGN 388
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+LV +Y+KC V F + E++++S+ ++I+G+AQN EA+NLFRK++ +G+
Sbjct: 389 TLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDV 448
Query: 431 NQITFLSVLSACNHVGLVEEGFI 453
+ + SVL AC+ GL FI
Sbjct: 449 DPMMIGSVLRACS--GLKSRNFI 469
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 153/321 (47%), Gaps = 43/321 (13%)
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
++L + C +G Q+H L+ + L ++ MYG+ G + +A KVF MS+
Sbjct: 50 SLLLDLCVAAKALPQGQQLHALLLKSHLS--AFLATKLVLMYGKCGSLRDAVKVFDEMSE 107
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------------ 261
R SWN+L+ +V +G+ EA L++ M
Sbjct: 108 RTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167
Query: 262 ---------GKDFVSWTTMITGFSSKGNLEKSIELFN--MMPEKDDVTWTAIISGFVNNE 310
G+ +I + G+L + LF+ MM ++D V+W +IIS V
Sbjct: 168 HGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEG 227
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
EA F M V N T + L + + G IH V+K N +DV + N
Sbjct: 228 NCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVAN 287
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+++Y+KCG + DA R+F ++ R+ VS+N+++SG QN L +ALN FR M++ G P
Sbjct: 288 ALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKP 347
Query: 431 NQITFLSVLSACNHVGLVEEG 451
+Q++ L++++A G + +G
Sbjct: 348 DQVSVLNLIAASGRSGNLLKG 368
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S +L A L QG Q+HA ++K ++ + ++ + LV +Y KCG++ DA ++F + E
Sbjct: 50 SLLLDLCVAAKALPQGQQLHALLLKSHLSAFLATK--LVLMYGKCGSLRDAVKVFDEMSE 107
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-I 453
R I S+N+++ F +G EA+ L++ M+ G+ + TF SVL AC +G G I
Sbjct: 108 RTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167
Query: 454 YFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGV-WGALLGA 509
+ ++K Y G + C ++ + G+ G L A L + + E V W +++ A
Sbjct: 168 HGVAVKCGY----GEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 313/601 (52%), Gaps = 47/601 (7%)
Query: 43 AMITGFVRRGMFYEAEELYVNM---PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVE 99
++ G+ R M+ EA L+ + P DS +++ + R I +V+
Sbjct: 75 GLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVK 134
Query: 100 K----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
+ D+V S+V Y K A ++FD+MP+K+V W ++ Y + FE+
Sbjct: 135 EGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRY 194
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
F MRR G +S+T+T +C R G ++H + GF D + +++ MYG+
Sbjct: 195 FGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGK 254
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------------- 260
G ++ A +VF M + V+WNS+I+GY G+ +LF+RM
Sbjct: 255 CGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTST 314
Query: 261 -----------PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
GK D ++++ + G +E + +F +MP+
Sbjct: 315 LMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTT 374
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+W +ISG+V + +A R F EM + V P+ +T +SVL+A + A L +G +IH
Sbjct: 375 VSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNL 434
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+V+ N+ ++ + +L+ +Y+KCG V +A+ +F + ER++VS+ SMI+ + +G EA
Sbjct: 435 IVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEA 494
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L LF +M + P+++TFL++LSAC+H GLV++G +F M +Y I P EHY+C++
Sbjct: 495 LELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLIT 554
Query: 477 ILGRAGSLAEAIDLINSMT-FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
+LGRAG L EA +++ S + L A R H NLDL A++L++ +PD ++
Sbjct: 555 LLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSS 614
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
Y++LS++Y+ GK + VR K K ++K+PGCSWI + +K+ F S L+
Sbjct: 615 TYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEG 674
Query: 596 I 596
I
Sbjct: 675 I 675
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 222/489 (45%), Gaps = 49/489 (10%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLF 156
++ DV +++ Y A+ +FD + + ++ GY + +++ LF
Sbjct: 34 LQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLF 93
Query: 157 LS-MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
M + +S T + +ACG R G +H + + G DI++G+S++ MY +
Sbjct: 94 DKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAK 153
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTM 271
+ A K+F M +D WN++IS Y +G+ EEA R F M D V+ TT
Sbjct: 154 CNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTA 213
Query: 272 ITG-----------------------------------FSSKGNLEKSIELFNMMPEKDD 296
I+ + G LE +IE+F MP K
Sbjct: 214 ISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTV 273
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V W ++I+G+ + F M + V+P TL+S L A + +A L +G +H +
Sbjct: 274 VAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGY 333
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+++ ++ D+ + +SL+ LY KCG V A IF + + VS+N MISG+ G +A
Sbjct: 334 IIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDA 393
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L LF +M + P+ ITF SVL+AC+ + +E+G ++ N+ ++D
Sbjct: 394 LRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGR-EIHNLIVERNLGNNEVVMGALLD 452
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPD 532
+ + G++ EA + + E W +++ A GR + L+L Q ++PD
Sbjct: 453 MYAKCGAVEEAFGVFKCLP-ERDLVSWTSMITAYGSHGRVYEALELFAEMLQS--NVKPD 509
Query: 533 SATPYVVLS 541
T +LS
Sbjct: 510 RVTFLAILS 518
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 203/426 (47%), Gaps = 57/426 (13%)
Query: 21 CSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW---RDSVCSNA 76
C+ +E A ++F MP ++ + +I+ + + G F EA Y M R+ DSV
Sbjct: 154 CNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALR-YFGMMRRFGFEPDSVTITT 212
Query: 77 LISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
IS ++ + I + +V D ++VD Y K G++ A E+F++MP K
Sbjct: 213 AISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKT 272
Query: 133 VVAWTAMVDGYM----KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
VVAW +M++GY + C + LF M G+ TLT AC + + EG
Sbjct: 273 VVAWNSMINGYGFKGDGISCIQ----LFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGK 328
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
VHG + R DI L +S++ +Y + G ++ A +F +M K VSWN +ISGYV G
Sbjct: 329 FVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEG 388
Query: 249 EIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNM-------------- 290
++ +A RLF M D +++T+++ S LEK E+ N+
Sbjct: 389 KLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMG 448
Query: 291 ---------------------MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+PE+D V+WT++I+ + ++ + EA F EML+ +V+P
Sbjct: 449 ALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKP 508
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+++T ++LSA + ++ G ++ + + + + L++L + G + +AY I
Sbjct: 509 DRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEI 568
Query: 389 FTNIDE 394
+ E
Sbjct: 569 LQSNPE 574
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 170/374 (45%), Gaps = 26/374 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A E+F MP + V++ +MI G+ +G +L+ M + + V +
Sbjct: 261 AIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRM---YSEGVKPTLTTLTSTLMA 317
Query: 86 RCEEAARIFEAM----------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
C ++A++ E ++ D+ S++D Y K G+V A IF MP+ V+
Sbjct: 318 -CSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVS 376
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W M+ GY+ D LF M + + ++IT T + AC + +G ++H L+
Sbjct: 377 WNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIV 436
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ ++ +++ MY + G ++EA VF + +RD VSW S+I+ Y +G + EA
Sbjct: 437 ERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALE 496
Query: 256 LFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGF 306
LF M D V++ +++ S G ++ + FN M + ++ +I+
Sbjct: 497 LFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLL 556
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+ EA+ I ++ + LS++ SA L+ G +I +++ + + D
Sbjct: 557 GRAGRLHEAYE--ILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPD-DS 613
Query: 367 SIQNSLVSLYSKCG 380
S L ++Y+ G
Sbjct: 614 STYIILSNMYASFG 627
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L +L AS + +L QG +H VV + +++DV + +L+SLY C A +F I+
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65
Query: 394 ERNIVSY-NSMISGFAQNGLGEEALNLFRK-MKDEGLVPNQITFLSVLSACN-------- 443
+S N +++G+ +N + +EAL LF K M L P+ T+ SVL AC
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLG 125
Query: 444 ---HVGLVEEGFI 453
H LV+EG +
Sbjct: 126 QMIHTCLVKEGLM 138
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 177/492 (35%), Positives = 272/492 (55%), Gaps = 27/492 (5%)
Query: 121 AREIFDKMPEKNVVAWTAMV-------DGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLT 172
AR +F +MPE N W ++ D +++ + LF +M G + N T
Sbjct: 71 ARAVFRQMPEPNCFCWNTILRVLAETNDEHLQ----SEALMLFSAMLCDGRVKPNRFTFP 126
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ +AC R R REG Q+HGL+ +FGF D + ++++ MY M++A +F +
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFC----K 182
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
+ V ++ + ++E L +R + V W MI G G+++ + LF+ MP
Sbjct: 183 NVVDFDG-------SCQME----LDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMP 231
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
++ V+W +ISG+ N + EA F EM ++ PN +TL SVL A A L G
Sbjct: 232 QRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKW 291
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
IH + K +E D + ++LV +YSKCG++ +A ++F + +RN ++++++I FA +G
Sbjct: 292 IHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGR 351
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
E+A+ F M G+ PN + ++ +LSAC+H GLVEEG +F M + ++P EHY
Sbjct: 352 AEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYG 411
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
CMVD+LGRAG L EA +LI +M EP +W ALLGA + H NL + + A+ LMEL P
Sbjct: 412 CMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPH 471
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLD 592
+ YV LS+LY+ +G RVR+K K IRK PGCSWI + +H FL S
Sbjct: 472 DSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSK 531
Query: 593 LKEIEVTLQTIS 604
KEI+ L +S
Sbjct: 532 AKEIQAMLGEMS 543
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 41/246 (16%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
+VV W M+DG + G + A+ +FD+MP+++VV+W M+ GY + F + +LF M+
Sbjct: 203 NVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQ 262
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+ N +TL + A R G +H + + D +LG++++ MY + G +D
Sbjct: 263 SSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSID 322
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------------------- 260
EA +VF + KR+A++W+++I + +G E+A F M
Sbjct: 323 EALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACS 382
Query: 261 ------PGKDFVSWTTMITGFSSK--------------GNLEKSIELFNMMP-EKDDVTW 299
G+ F S + G + G+LE++ EL MP E DDV W
Sbjct: 383 HAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIW 442
Query: 300 TAIISG 305
A++
Sbjct: 443 KALLGA 448
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 135/297 (45%), Gaps = 64/297 (21%)
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF--VNNEQYE-EAFRWFIEMLRKD-VR 328
FSS+ +++ + +F MPE + W I+ N+E + EA F ML V+
Sbjct: 61 CAFSSR-DIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVK 119
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN+ T SVL A A + L +G QIH +VK D + ++LV +Y C + DAY +
Sbjct: 120 PNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSL 179
Query: 389 FTN-----------------------------------------------IDERNIVSYN 401
F + +R++VS+N
Sbjct: 180 FCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWN 239
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKT 460
MISG+AQNG EA+NLF++M+ + PN +T +SVL A +G +E G +I+ + K
Sbjct: 240 VMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN 299
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG----VWGALLGAGRTH 513
IE + +VD+ + GS+ EA+ + FE P W A++GA H
Sbjct: 300 --KIEIDDVLGSALVDMYSKCGSIDEALQV-----FETLPKRNAITWSAIIGAFAMH 349
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 11/271 (4%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS--VCSNALISG 80
I A +F MP R+ VS+ MI+G+ + G F EA L+ M + D V +++
Sbjct: 220 IKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPA 279
Query: 81 YLKVGRCEEAARIF----EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
++G E I + +E D V ++VD Y K G + EA ++F+ +P++N + W
Sbjct: 280 IARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITW 339
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LVS 195
+A++ + ED F M + G+ N + + AC EG +V
Sbjct: 340 SAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVK 399
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAY 254
G I ++ + GR G ++EA ++ M + D V W +L+ + ++
Sbjct: 400 VVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGE 459
Query: 255 RLFE---RMPGKDFVSWTTMITGFSSKGNLE 282
R+ E + D S+ + ++S GN E
Sbjct: 460 RVAETLMELAPHDSGSYVALSNLYASLGNWE 490
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 330/657 (50%), Gaps = 65/657 (9%)
Query: 5 TSASYNAMITALINNNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
+ +N ++TA ++ + A +F +P R+ VS+ A++ G EA L
Sbjct: 24 ATTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRA 83
Query: 64 MPARWRDSVCSNALISGYL----KVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCK 114
M A+ + SN G V R +++ K +V A +++D Y K
Sbjct: 84 MHAQ---GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAK 140
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
GRV +AR++FD MPE+N V+W A++ GY + +LFL M R G+A + T L
Sbjct: 141 CGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASL 200
Query: 175 F---EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
E F + Q+HG + ++G + + N+ IT Y + G + ++ ++F +
Sbjct: 201 LTAVEGPSCFLMH----QLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGD 256
Query: 232 -RDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVSWTTMITGFSSKGN----- 280
RD +SWN+++ Y HNG +EA + F RM + D S+T++I+ S G+
Sbjct: 257 IRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQG 316
Query: 281 ----------------------------------LEKSIELFNMMPEKDDVTWTAIISGF 306
+E + + FN + KD V+W ++++G+
Sbjct: 317 RVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGY 376
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+ +A ++F M ++VR ++ S+ L +S+ A L G QIH V+ S+
Sbjct: 377 SQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASND 436
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ +SL+ +YSK G + DA + F D+ + V +N+MI G+AQ+G E LF +M
Sbjct: 437 FVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQR 496
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+ ITF+ ++++C+H GLV+EG +M+T Y + EHYAC VD+ GRAG L +
Sbjct: 497 KAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDK 556
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A LI+SM FEP VW LLGA R H N++LA A HL EP + YV+LS +YS
Sbjct: 557 AKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSG 616
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+G D V+ K + + K PG SWI +K++VH F A KS + EI L+ +
Sbjct: 617 LGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 296/549 (53%), Gaps = 41/549 (7%)
Query: 105 WGSMVDG-YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
+G M+ G Y + G + A + F+ + +N+ +W ++ + K CF D LF M + G
Sbjct: 49 FGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEG 108
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+S L +AC ++ H L + + D + +++ +Y LG ++EA+
Sbjct: 109 KLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAH 168
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------------- 260
KVF + +++V W +I G+++ E + LF RM
Sbjct: 169 KVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVY 228
Query: 261 PGKD-----------------FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
GK+ F T+++ + G L+ +++LF + +D V W+AII
Sbjct: 229 AGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAII 288
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
+GF N + E+ F +ML V PN +T +S++ A ++ +L QG +H ++++ +E
Sbjct: 289 AGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVE 348
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
DV S + +Y+KCG +V AYR+F I E+N+ S+++MI+GF +GL EALNLF +M
Sbjct: 349 LDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEM 408
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
+ +PN +TF+SVLSAC+H G +EEG+ +FKSM Y I P EHYACMVD+LGRAG
Sbjct: 409 RSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGK 468
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
+ EA+ IN+M EP WGALLGA R H +LA+ A+ L+ LE D + YV+LS++
Sbjct: 469 IDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNI 528
Query: 544 YSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
Y+ +G + R+K K I K G + I +++K++LF + + +IE ++
Sbjct: 529 YADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSL 588
Query: 604 SKGTKEFDW 612
+ +E +
Sbjct: 589 KERMRELGY 597
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 46/375 (12%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S++ A + F + N S+ ++ + FY+ +L+ M + N + +
Sbjct: 62 SLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVK 121
Query: 82 LKVG-RCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G + A++F ++ +E D ++++ Y + G + EA ++F+++P KN V
Sbjct: 122 ACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVI 181
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W M+ G++ F+LF MRR G + + L +ACG + +EG HGL
Sbjct: 182 WGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCI 241
Query: 196 RFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ F D + L S++ MY + GF+D A K+F +S RD V W+++I+G+ NG E+
Sbjct: 242 KKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESI 301
Query: 255 RLFERMPGKDF----VSWTTMITGFSSKGNLEK-----------SIEL------------ 287
+F +M V++ +++ SS G+L++ +EL
Sbjct: 302 SMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMY 361
Query: 288 ------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
F +PEK+ +W+ +I+GF + EA F EM + PN +T
Sbjct: 362 AKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFV 421
Query: 336 SVLSASAATATLNQG 350
SVLSA + + + +G
Sbjct: 422 SVLSACSHSGRIEEG 436
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 157/331 (47%), Gaps = 51/331 (15%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM- 260
++ G I Y +LG + A+K F+ ++ + SWN++++ + N + +LF+RM
Sbjct: 46 SLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRML 105
Query: 261 ---------------------------------------PGKDFVSWTTMITGFSSKGNL 281
G +V+ ++ ++ G+L
Sbjct: 106 KEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVA-PALMNVYTELGSL 164
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
E++ ++F +P K+ V W +I G +N + F F M R + + ++ A
Sbjct: 165 EEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQAC 224
Query: 342 AATATLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+G H +K N ++S+ +Q SLV +Y KCG + A ++F I R++V +
Sbjct: 225 GNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVW 284
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
+++I+GFA+NG E++++FR+M + + PN +TF S++ AC+ +G +++G +S+
Sbjct: 285 SAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQG----RSVHG 340
Query: 461 LYNIEPGPE----HYACMVDILGRAGSLAEA 487
Y I G E +Y +D+ + G + A
Sbjct: 341 -YMIRNGVELDVKNYTSFIDMYAKCGCIVTA 370
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 134/288 (46%), Gaps = 11/288 (3%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALIS 79
S+ EA ++F +P++N+V + MI G + + EL+ M D LI
Sbjct: 163 SLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQ 222
Query: 80 GYLKV-----GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
V G+ I + ++ + S+VD Y K G + A ++F+++ ++VV
Sbjct: 223 ACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVV 282
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W+A++ G+ + + +F M + NS+T + AC ++G VHG +
Sbjct: 283 VWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYM 342
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
R G + D+ S I MY + G + A +VF + +++ SW+++I+G+ +G EA
Sbjct: 343 IRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEAL 402
Query: 255 RLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
LF M + V++ ++++ S G +E+ F M +T
Sbjct: 403 NLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGIT 450
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 5/182 (2%)
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
++LS T TL Q++A ++ + + + Y + G++ A + F +I
Sbjct: 17 TLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFE 76
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
N+ S+N++++ ++N + L LF++M EG + + + + AC + L +G F
Sbjct: 77 NLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLF-QGAKLF 135
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
S+ +E P ++++ GSL EA + + + +WG ++ + HLN
Sbjct: 136 HSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSV-IWGVMI---KGHLN 191
Query: 516 LD 517
Sbjct: 192 FS 193
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 180/571 (31%), Positives = 297/571 (52%), Gaps = 52/571 (9%)
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
A ++ D+ +++D Y K + +A IF MP +++VAW AM+ GY +
Sbjct: 152 IHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAV 211
Query: 154 DLFLSMRR--GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD--------- 202
LSM+ + N+ TL L + +G VH R +
Sbjct: 212 AHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTD 271
Query: 203 -IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++LG +++ MY + G + A +VF M R+ V+W++LI G+V + +A+ LF+ M
Sbjct: 272 GVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAML 331
Query: 262 GK----------------------------------------DFVSWTTMITGFSSKGNL 281
+ D + ++++ ++ G +
Sbjct: 332 AQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLI 391
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+++I LF+ M KD V+++A++SG+V N + EEAF F +M +V P+ T+ S++ A
Sbjct: 392 DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 451
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ A L G H V+ + S+ SI N+L+ +Y+KCG + + ++F + R+IVS+N
Sbjct: 452 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWN 511
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MI+G+ +GLG+EA LF +M + G P+ +TF+ +LSAC+H GLV EG +F M+
Sbjct: 512 TMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHG 571
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y + P EHY CMVD+L R G L EA + I SM VW ALLGA R + N+DL K
Sbjct: 572 YGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKK 631
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
++ + EL P+ +V+LS++YS G+ + VR+ +K++ +KSPGCSWI + +H
Sbjct: 632 VSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLH 691
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
F+ G +S EI L I G K+ +
Sbjct: 692 AFVGGDQSHPQSPEIYRELDNILVGIKKLGY 722
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 228/485 (47%), Gaps = 72/485 (14%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP---A 66
A++ + C + +A IFATMP R+ V++ AM+ G+ GM++ A ++M
Sbjct: 164 TALLDMYVKCAC-LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMH 222
Query: 67 RWRDSVCS-----------NALISGY----LKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
R R + + AL G ++ C + R ++ + V+ +++D
Sbjct: 223 RLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDM 282
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT- 170
Y K G ++ AR +FD MP +N V W+A++ G++ F LF +M G+ F S T
Sbjct: 283 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 342
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ AC R G Q+H L+++ G D+ GNS+++MY + G +D+A +F M+
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------PGKDFVS------- 267
+D VS+++L+SGYV NG EEA+ +F++M P ++
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 462
Query: 268 --WTTMITGFSSK--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
+ +I G +S+ G ++ S ++FNMMP +D V+W +I+G+ +
Sbjct: 463 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ-----IHAHVVKMNMESDV 366
+EA F+EM P+ +T +LSA + + + +G H + + ME +
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYI 582
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNI----DERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+V L S+ G + +AY ++ D R V+ + LG++ + ++
Sbjct: 583 ----CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQE 638
Query: 423 MKDEG 427
+ EG
Sbjct: 639 LGPEG 643
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 183/392 (46%), Gaps = 58/392 (14%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD--CFEDGFDLFLSMRRGGMAFNSITLTI 173
G + A +FD++P +V + ++ Y DG L+ M R +A N+ T
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+AC + G +H G D+ + +++ MY + + +A +F+ M RD
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 234 AVSWNSLISGYVHNGEIEEA---------------------YRLFERMPGKDFVSWTTMI 272
V+WN++++GY H+G A L + + ++ T +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 273 TGF----------SSKGNLEKSIEL--------------------FNMMPEKDDVTWTAI 302
+ +SK L + L F+ MP +++VTW+A+
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKD---VRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
I GFV + +AF F ML + + P +++S L A A+ L G Q+HA + K
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAK 368
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ +D++ NSL+S+Y+K G + A +F + ++ VSY++++SG+ QNG EEA +
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
F+KM+ + P+ T +S++ AC+H+ ++ G
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHG 460
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA--FRWFIEMLRKDVRPNQLTL 334
+ G+L ++ LF+ +P D T+ +I + ++ A + MLR V PN T
Sbjct: 69 ASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTF 128
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
L A +A A + G IH H + +++D+ + +L+ +Y KC + DA IF +
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 395 RNIVSYNSMISGFAQNGLGEEALN--LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
R++V++N+M++G+A +G+ A+ L +M+ L PN T +++L G + +G
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 181/519 (34%), Positives = 277/519 (53%), Gaps = 45/519 (8%)
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL---FLS 158
++ W ++ Y K G + A ++FD MP ++VV++ M+ ++ + D DL +
Sbjct: 94 ILIWNKLLSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVRNN--YDALDLVGLYSK 151
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M++ + N IT L AC R H R G + +G+S++ Y +
Sbjct: 152 MKKEDVKPNHITFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMK 211
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITG 274
+++A K F+ + + D VSWN +I G N E A R+F +M D + T++I
Sbjct: 212 LEDAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKT 271
Query: 275 FSSKGNLEKS------------------------------------IELFNMMPEKDDVT 298
S G+L+ +++F + E + ++
Sbjct: 272 CSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVASPVKIFGSISEPNIIS 331
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA+ISGF+ NEQ EEA F EMLR VR N + SS+L A L QG QIHA ++
Sbjct: 332 WTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARII 391
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K D+S+ N+L+ +YSKCG++ DA+ +F + + ++VS +MI + Q+G G+EAL
Sbjct: 392 KSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALE 451
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
+ +MK EGLVP+ +TFL L AC+H GLVEEG FK M +N++P EH+AC+VD+L
Sbjct: 452 ILAEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDML 511
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L EA + I+ M E VW LLGA R H + L + +AQ +MEL+P PYV
Sbjct: 512 GRAGRLNEAENFIDEMGIESDVLVWETLLGACRVHGEMVLGEKSAQKIMELQPGRHGPYV 571
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
+L+++Y+ G D VR K ++K GCSW+ L+
Sbjct: 572 LLANIYAERGSWEDKVMVREKLVSHGLKKQVGCSWVALE 610
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 179/357 (50%), Gaps = 46/357 (12%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C R G+ VH + + + I++ N ++++Y + G + A+++F M +RD
Sbjct: 65 ILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMPRRD 124
Query: 234 AVSWNSLISGYVHNG-EIEEAYRLFERMPGKD---------------------------- 264
VS+N++IS V N + + L+ +M +D
Sbjct: 125 VVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGIFH 184
Query: 265 ------------FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
FV ++++ G++ + LE +I+ FN + E D V+W +I G N
Sbjct: 185 AHTVRCGLSSNEFVG-SSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSK 243
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
E A R F +ML+ +VR + TL+S++ + L G Q H +K+ + + I N+L
Sbjct: 244 EHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNAL 303
Query: 373 VSLYSKC-GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+++YSKC V +IF +I E NI+S+ +MISGF QN EEA+ LF++M G+ N
Sbjct: 304 ITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVREN 363
Query: 432 QITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+F S+L ++ +E+G I+ + +K+ + ++ + ++D+ + GSL +A
Sbjct: 364 DFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNN--ALIDMYSKCGSLEDA 418
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S +L L G +H ++VK+N+ + I N L+SLY K G++ A+++F +
Sbjct: 63 SQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMPR 122
Query: 395 RNIVSYNSMISGFAQNGLGE-EALNLFRKMKDEGLVPNQITFLSVLSACN 443
R++VS+N+MIS +N + + L+ KMK E + PN ITF ++ AC+
Sbjct: 123 RDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACD 172
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 20/271 (7%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---P 65
YNA+IT + +IF ++ N +S+ AMI+GF++ EA L+ M
Sbjct: 300 YNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLG 359
Query: 66 ARWRDSVCSNALISGYLKVGRCEEA----ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
R D S +++ Y + E+ ARI ++ D+ +++D Y K G + +A
Sbjct: 360 VRENDFSFS-SILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDA 418
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
+F KM + +VV+ T M+ Y + ++ ++ M+ G+ + +T AC
Sbjct: 419 HLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHG 478
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGN----SIITMYGRLGFMDEA-NKVFSMMSKRDAVS 236
EGV+V ++ D+++ ++ M GR G ++EA N + M + D +
Sbjct: 479 GLVEEGVRVFKIMIE---DHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLV 535
Query: 237 WNSLISGYVHNGEI----EEAYRLFERMPGK 263
W +L+ +GE+ + A ++ E PG+
Sbjct: 536 WETLLGACRVHGEMVLGEKSAQKIMELQPGR 566
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 270/494 (54%), Gaps = 41/494 (8%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLG 217
++RG + + + L + C R + +G VH LV D ++L N I+ MY + G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------- 260
+D+A ++F M +D V+W +LI+G+ N +A LF +M
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK 197
Query: 261 ---------PGKDFVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
PG ++ + ++ ++ G+++ + F+ MP K +V+
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISG + E A +M RK+ +P T SSV SA A+ L QG +HAH++
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMI 317
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K ++ I N+L+ +Y+K G++ DA R+F + + ++VS+N+M++G AQ+GLG+E L+
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F +M G+ PN+I+FL VL+AC+H GL++EG YF+ MK Y +EP HY VD+L
Sbjct: 378 RFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLL 436
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR G L A I M EP VWGALLGA R H N++L AA+ EL+P + P +
Sbjct: 437 GRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRM 496
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
+LS++Y+ G+ RD +VR K ++K P CSW+ +++ VHLF+A ++ +KEI
Sbjct: 497 LLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRG 556
Query: 599 TLQTISKGTKEFDW 612
+ IS KE +
Sbjct: 557 KWEEISGKIKEIGY 570
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 162/347 (46%), Gaps = 39/347 (11%)
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
G ++ GR A + ++ +V +V+ Y K G + +AR +FD+MP K++V WTA+
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ G+ + + D LF M R G+ N TL+ L +A G G Q+H ++G+
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY 220
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ +G++++ MY R G MD A F M + VSWN+LISG+ GE E A L +
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280
Query: 260 MPGKDFVS----------------------WT-----------------TMITGFSSKGN 280
M K+F W T++ ++ G+
Sbjct: 281 MQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGS 340
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
++ + +F+ + + D V+W +++G + +E F +MLR + PN+++ VL+A
Sbjct: 341 IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+ + L++G + K +E DV + V L + G + A R
Sbjct: 401 CSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAER 447
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 131/282 (46%), Gaps = 20/282 (7%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNAL-ISGYLK 83
+A +F MP ++ V++ A+I GF + +A L+ P R + N +S LK
Sbjct: 141 DARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLF---PQMLRLGLQPNHFTLSSLLK 197
Query: 84 VGRCEEA--------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
E A + + V ++VD Y + G + A+ FD MP K+ V+
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W A++ G+ + E L M+R T + +F AC +G VH +
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMI 317
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ G +GN+++ MY + G +D+A +VF + K D VSWN++++G +G +E
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 256 LFERM------PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
FE+M P + +S+ ++T S G L++ + F +M
Sbjct: 378 RFEQMLRIGIEPNE--ISFLCVLTACSHSGLLDEGLYYFELM 417
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 139/317 (43%), Gaps = 21/317 (6%)
Query: 21 CSIYEAFEI-FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNAL 77
C +A ++ F MP ++ VS+ A+I+G R+G A L M + +++
Sbjct: 237 CGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSV 296
Query: 78 ISGYLKVGRCEEAARIFEAMVEK--DVVAW--GSMVDGYCKKGRVIEAREIFDKMPEKNV 133
S +G E+ + M++ ++A+ +++D Y K G + +A+ +FD++ + +V
Sbjct: 297 FSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W M+ G + ++ D F M R G+ N I+ + AC EG+ L
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIE- 251
+ ++ + D+ + + + GR+G +D A + M + A W +L+ + +E
Sbjct: 417 MKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMEL 476
Query: 252 ---EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE-----KDDVTWTAI- 302
A R FE P D + ++S G ++ MM E + +W I
Sbjct: 477 GVYAAERAFELDP-HDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIE 535
Query: 303 --ISGFVNNEQYEEAFR 317
+ FV N++ +
Sbjct: 536 NAVHLFVANDETHPQIK 552
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 277/487 (56%), Gaps = 15/487 (3%)
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLS-MRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
N +W + G++ + + L+ ++ G ++ T +LF+AC R R G ++
Sbjct: 114 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 173
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
G V GFD DI + N++I + G +D A K+F RD VSWNS+I+GY G +
Sbjct: 174 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYC--GNL 231
Query: 251 EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
E A +LF+ M K VSWTTM+ G++ G L+ + +LF+ MP+KD V W A+I G+V+
Sbjct: 232 ESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHAN 291
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+ +EA F EM ++ P+++T+ S LSA + L+ G IH ++ K + +V++
Sbjct: 292 RGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGT 351
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+ +Y+KCG + A ++F + RN +++ ++ISG A +G A+ F +M D ++P
Sbjct: 352 ALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMP 411
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+++TFL +LSAC H GLVEEG YF M + +N+ P +HY+CMVD+LGRAG L EA +L
Sbjct: 412 DEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEEL 471
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I SM E VWGAL A R H N+ + + AA L++++P + YV+L+++Y
Sbjct: 472 IKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMW 531
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEF 610
++ + R + + + K+P SW +L + FL +E+TL + F
Sbjct: 532 KEAGKARKLMRQRGVEKTPD-SWSLLS-VLRFFLY----------LEITLSLVLTLADAF 579
Query: 611 DWPKHDW 617
++ W
Sbjct: 580 EFAGFQW 586
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 15/274 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M ++T S+ M+ + + A+++F MP ++ V + AMI G+V EA L
Sbjct: 241 MTNKTMVSWTTMVVGYAQSGL-LDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALAL 299
Query: 61 YVNMPAR--WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV---VAWGS-MVDGYCK 114
+ M A D V + +S ++G + I + + ++ VA G+ ++D Y K
Sbjct: 300 FNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAK 359
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G++ +A ++F ++P +N + WTA++ G F M + + +T L
Sbjct: 360 CGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGL 419
Query: 175 FEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKR 232
AC EG + + S+F + + ++ + GR G ++EA ++ SM +
Sbjct: 420 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 479
Query: 233 DAVSWNSL-----ISGYVHNGEIEEAYRLFERMP 261
DAV W +L I G V GE A +L + P
Sbjct: 480 DAVVWGALFFACRIHGNVLMGE-RAASKLLQMDP 512
>gi|347954466|gb|AEP33733.1| chlororespiratory reduction 21, partial [Lepidium sativum]
Length = 805
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 325/594 (54%), Gaps = 20/594 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
+A +F +P RN V++ A++ G+V+ GM EA L +M P R S C +A
Sbjct: 204 DARMVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASA 263
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G ++ G+ A I + E D + S+++ YCK G + A IFD++ K++V W
Sbjct: 264 NMGGIEEGKQSHAIAIVNGL-ELDNILGTSILNFYCKVGLIEYAEMIFDRIIGKDIVTWN 322
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ GY++ +D + MR + ++S+TL+ L A R G +V R
Sbjct: 323 LLISGYVQQGLVDDAMYMCKLMRLENLRYDSVTLSTLMSAAARTQNLNLGKEVQCYSIRH 382
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
F+ +I+L +S + MY + G + +A KVF +++D + WN+L++ Y +G EA +LF
Sbjct: 383 SFESEIVLASSTVDMYAKCGSIVDAKKVFESTAEKDLILWNTLLAAYADSGLSGEALKLF 442
Query: 258 -----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVN 308
E +P + ++W ++I F G ++++ E+F M + ++WT +++G+V
Sbjct: 443 YDMLLESVP-PNIITWNSIILSFLRNGQVDEAKEMFLQMQSSGIFPNLISWTTMMNGWVQ 501
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVS 367
N EEA + +M +RPN T+S LSA +LN G IH ++++ S VS
Sbjct: 502 NGCSEEAIIFLRKMQESGLRPNAFTISVALSACTHLVSLNFGRSIHGYIIRNFQHSSSVS 561
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ SLV LY+KCG++ A ++F N + +N+MIS +A G +E++ L+R+++D
Sbjct: 562 FETSLVDLYAKCGDINQAEKVFGNKLYDELPLHNAMISAYALYGNVKESITLYRRLEDMA 621
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ P+ ITF S+L AC H G + + F M + ++++P EHY MVDIL +G +A
Sbjct: 622 MKPDNITFTSLLYACTHAGDIVQAINIFTEMVSKHDMKPCLEHYGLMVDILASSGETNKA 681
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
++LI M ++P + +L+ + +L ++ L+E EP+++ YV +S+ Y++
Sbjct: 682 LELIEEMPYKPDARMIQSLVASCNKQHKTELVDYLSRQLLESEPENSGNYVTISNAYAIE 741
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILK-DKVHLFLAGRKSCLDLKEIEVTL 600
G + ++R K K ++K PGCSWI +K + VH+F+A + + EI+ L
Sbjct: 742 GSWNEVMKMREMMKAKGLKKKPGCSWIQIKGEGVHVFVANDMTHIKNDEIQRIL 795
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/596 (25%), Positives = 274/596 (45%), Gaps = 69/596 (11%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+S+SY I++L + I EA + M RN V I G + +G YE
Sbjct: 12 SSSSYFHQISSLCKHG-EIREALRLVKEMDFRN-VRIGPEIYGEILQGCVYE-------- 61
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
RD + + LK G A ++ ++ Y K + A+++
Sbjct: 62 ----RDLCTGQQIHARILKNG----------AFYARNEYIETKLLIFYAKCDALEVAQDL 107
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F ++ +NV +W A++ ++ E F+ M G+ ++ + + +ACG
Sbjct: 108 FSRLRVRNVFSWAAIIGLKCRIGLCEGALLGFVEMLENGVLPDNYVVPNVCKACGALHWS 167
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
G VHG V + G + + +S+ MYG+ G +D+A VF + +R+ V+WN+L+ GY
Sbjct: 168 WFGRGVHGYVLKAGLHDCVFVASSLADMYGKCGVLDDARMVFDEIPERNVVAWNALMVGY 227
Query: 245 VHNGEIEEAYRLFERM--------------------------PGK-------------DF 265
V NG EEA RL M GK D
Sbjct: 228 VQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDN 287
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ T+++ + G +E + +F+ + KD VTW +ISG+V ++A M +
Sbjct: 288 ILGTSILNFYCKVGLIEYAEMIFDRIIGKDIVTWNLLISGYVQQGLVDDAMYMCKLMRLE 347
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++R + +TLS+++SA+A T LN G ++ + ++ + ES++ + +S V +Y+KCG++VDA
Sbjct: 348 NLRYDSVTLSTLMSAAARTQNLNLGKEVQCYSIRHSFESEIVLASSTVDMYAKCGSIVDA 407
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F + E++++ +N++++ +A +GL EAL LF M E + PN IT+ S++ +
Sbjct: 408 KKVFESTAEKDLILWNTLLAAYADSGLSGEALKLFYDMLLESVPPNIITWNSIILSFLRN 467
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT---FEPPPGV 502
G V+E F M++ I P + M++ + G EAI + M P
Sbjct: 468 GQVDEAKEMFLQMQS-SGIFPNLISWTTMMNGWVQNGCSEEAIIFLRKMQESGLRPNAFT 526
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLME-LEPDSATPY-VVLSDLYSVIGKKRDGNRV 556
L A ++L+ + +++ + S+ + L DLY+ G +V
Sbjct: 527 ISVALSACTHLVSLNFGRSIHGYIIRNFQHSSSVSFETSLVDLYAKCGDINQAEKV 582
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 137/558 (24%), Positives = 249/558 (44%), Gaps = 81/558 (14%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALI 78
A ++F+ + +RN S+AA+I R G+ A +V M P + +VC
Sbjct: 104 AQDLFSRLRVRNVFSWAAIIGLKCRIGLCEGALLGFVEMLENGVLPDNYVVPNVCKACGA 163
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+ GR + +A + V S+ D Y K G + +AR +FD++PE+NVVAW A
Sbjct: 164 LHWSWFGRGVHG-YVLKAGLHDCVFVASSLADMYGKCGVLDDARMVFDEIPERNVVAWNA 222
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ GY++ E+ L MR+ G+ +T++ A EG Q H + G
Sbjct: 223 LMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNG 282
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ D ILG SI+ Y ++G ++ A +F + +D V+WN LISGYV G +++A + +
Sbjct: 283 LELDNILGTSILNFYCKVGLIEYAEMIFDRIIGKDIVTWNLLISGYVQQGLVDDAMYMCK 342
Query: 259 RMPGK----DFVSWTTMITG-----------------------------------FSSKG 279
M + D V+ +T+++ ++ G
Sbjct: 343 LMRLENLRYDSVTLSTLMSAAARTQNLNLGKEVQCYSIRHSFESEIVLASSTVDMYAKCG 402
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
++ + ++F EKD + W +++ + ++ EA + F +ML + V PN +T +S++
Sbjct: 403 SIVDAKKVFESTAEKDLILWNTLLAAYADSGLSGEALKLFYDMLLESVPPNIITWNSII- 461
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
+ L G A + + M+S IF N++S
Sbjct: 462 ----LSFLRNGQVDEAKEMFLQMQSS---------------------GIFP-----NLIS 491
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+ +M++G+ QNG EEA+ RKM++ GL PN T LSAC H+ + G +
Sbjct: 492 WTTMMNGWVQNGCSEEAIIFLRKMQESGLRPNAFTISVALSACTHLVSLNFGRSIHGYII 551
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
+ +VD+ + G + +A + + ++ P + A++ A + N+ +
Sbjct: 552 RNFQHSSSVSFETSLVDLYAKCGDINQAEKVFGNKLYDELP-LHNAMISAYALYGNVKES 610
Query: 520 KLAAQHL--MELEPDSAT 535
+ L M ++PD+ T
Sbjct: 611 ITLYRRLEDMAMKPDNIT 628
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 183/560 (32%), Positives = 292/560 (52%), Gaps = 47/560 (8%)
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW--TAMVDGYMK 145
E A++ + + D +A ++ Y + R+ +R IF P + ++ Y
Sbjct: 76 ELHAQLLKHGLHLDPLAASKLISSYALQRRLPASRRIFASFPNPQATTFLPNTLLRAYAL 135
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ----VHGLVSRFGFDY 201
LF +M + +S T + L +A G+ VH V + G
Sbjct: 136 NALPHAAVSLFSAMPQR----DSFTYSFLIKALSS-----SGLTPLRAVHSHVVKLGSIE 186
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D +GN++I Y + G +A+KVF M +RD VSWNS ++ V GE+ A R+F+ MP
Sbjct: 187 DTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEMP 246
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF--------------- 306
KD VSW T++ G++ G +E + ELF MPE++ V+W+ ++SG+
Sbjct: 247 DKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFDK 306
Query: 307 ----------------VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
N EEA R F +M V + + S+L+A A + +L G
Sbjct: 307 MPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALG 366
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF-TNIDERNIVSYNSMISGFAQ 409
+IH +V + + N+++ ++ KCG V A +F T I E++ VS+N++I GFA
Sbjct: 367 KRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAM 426
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+G G++AL+ F +MK +G P+ +T ++VLSAC H+G VEEG +F +M+ Y I P E
Sbjct: 427 HGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIVPQIE 486
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
HY CM+D+LGR G + EA+ LI SM ++P +WG+LL A R H N++ A++A L +L
Sbjct: 487 HYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELSKL 546
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+P +A Y VLS++Y+ G+ D + RM+ K +KS G SWI L + H F G +
Sbjct: 547 QPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWIELDEAFHEFTVGDRK 606
Query: 590 CLDLKEIEVTLQTISKGTKE 609
D +I + +S K+
Sbjct: 607 HSDSDQISEMVDRLSSHVKD 626
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 158/291 (54%), Gaps = 9/291 (3%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA+I A + N +A ++F MP R+ VS+ + + VR+G A ++ MP +
Sbjct: 192 NALIDAY-SKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEMPDK-- 248
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+V N ++ GY K G+ E+A +F+ M E++VV+W ++V GYCKKG + AR IFDKMP
Sbjct: 249 DTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFDKMP 308
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
KN+V WT MV + E+ LF M+ + + + + AC G +
Sbjct: 309 TKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALGKR 368
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNG 248
+H V + N++I M+ + G ++ A+ VF + ++++D+VSWN++I G+ +G
Sbjct: 369 IHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAMHG 428
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
++A F +M + F V+ +++ + G +E+ + F+ M E+D
Sbjct: 429 HGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNM-ERD 478
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 209/504 (41%), Gaps = 115/504 (22%)
Query: 20 NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMF-YEAEELYVNMPARWRDSVCSNALI 78
N + A +F+ MP R++ +Y+ +I G+ A +V D+ NALI
Sbjct: 136 NALPHAAVSLFSAMPQRDSFTYSFLIKALSSSGLTPLRAVHSHVVKLGSIEDTYVGNALI 195
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
Y K G +A+++FE M +D V+W S + ++G V AR +FD+MP+K+ V+W
Sbjct: 196 DAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEMPDKDTVSWNT 255
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++DGY K ED F+LF M
Sbjct: 256 VLDGYTKAGKMEDAFELFQCMP-------------------------------------- 277
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ +++ +++++ Y + G ++ A +F M ++ V+W ++S NG +EEA RLF
Sbjct: 278 -ERNVVSWSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFT 336
Query: 259 RMPGK----DFVSWTTMITGFSSKGNLE---------------KSIELFNMM-------- 291
+M D + +++ + G+L +S + N M
Sbjct: 337 QMKEAAVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCG 396
Query: 292 -------------PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
EKD V+W II GF + ++A +F +M + RP+ +T+ +VL
Sbjct: 397 CVNRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVL 456
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA + +G Q + NME D Y I I+
Sbjct: 457 SACTHMGFVEEGRQHFS-----NMERD--------------------YGIVPQIEH---- 487
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
Y MI + GL EEA+ L + M + PN++ + S+LSAC VE I +
Sbjct: 488 -YGCMIDLLGRGGLIEEAVGLIKSMPWD---PNEVIWGSLLSACRLHKNVEYAEIAVNEL 543
Query: 459 KTLYNIEPGPEHYACMVDILGRAG 482
L G +YA + +I AG
Sbjct: 544 SKLQPSNAG--NYAVLSNIYAEAG 565
>gi|302141863|emb|CBI19066.3| unnamed protein product [Vitis vinifera]
Length = 521
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 178/496 (35%), Positives = 268/496 (54%), Gaps = 11/496 (2%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A I + V DV +++ Y + +AR +FD+ E+NV WT M+ Y +
Sbjct: 27 AHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLERNVATWTTMISAYSSSGRPD 86
Query: 151 DGFDLFLSMRRG-GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
++ M N + + +ACG G +HG V R +D +L N++
Sbjct: 87 TALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLIHGRVFRANLGFDTVLMNTL 146
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
+ MY + G + A KVF + + SWN++ISGY G +EEA LF +MP D VSW
Sbjct: 147 LDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLMEEAVNLFYQMPEPDTVSWN 206
Query: 270 TMITGF-------SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
++I GF ++ G ++ ++ LF +PEKD V W+++IS F F +M
Sbjct: 207 SIIAGFGILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLFRDM 266
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ D+ +Q +SSVL A ++ L G Q+H+ VK ES+ SL+ LY+KCG +
Sbjct: 267 VNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLIDLYAKCGEI 326
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
D +F ER+ V Y +I G QNG EA+ F++M + GL PN+ITFL VLSAC
Sbjct: 327 EDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFLGVLSAC 386
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
H GLVEE + FK MKT Y +EP EHY C+V++L +AG EA +LI M FEP +
Sbjct: 387 RHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEELIAEMPFEPDQTI 446
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W +LLGA TH +L A+ L+ P+ + V LS++Y+ + + D +R +M++ +
Sbjct: 447 WNSLLGACGTHKKTELVNFIAERLLTTLPEDPSILVTLSNVYATL-EMWDDSR-KMREVI 504
Query: 563 KRI-RKSPGCSWIILK 577
K++ K G SWI +K
Sbjct: 505 KKVGMKEAGKSWIQIK 520
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 165/406 (40%), Gaps = 76/406 (18%)
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
CGRF +R G +H + + G D+ N+++ MY + + +A ++F +R+ +W
Sbjct: 13 CGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLERNVATW 72
Query: 238 NSLISGYVHNGEIEEAYRLFERM------------------------------------- 260
++IS Y +G + A + + +M
Sbjct: 73 TTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLIHGRVF 132
Query: 261 ---PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
G D V T++ + G+L + ++F+ + +W +ISG+ EEA
Sbjct: 133 RANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLMEEAVN 192
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F +M P+ ++ +S+++ L+ LY+
Sbjct: 193 LFYQM----PEPDTVSWNSIIAGFGI----------------------------LIDLYA 220
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
G + DA R+F + E++IV ++S+IS + GL +LFR M + + +Q S
Sbjct: 221 NDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLFRDMVNLDIEVDQFIISS 280
Query: 438 VLSACNH-VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
VL AC+ VGL ++ +K+ Y E ++D+ + G + + + L +
Sbjct: 281 VLKACSSLVGLGSGKQVHSFCVKSGYESERIT--VTSLIDLYAKCGEIEDGLALFYCTSE 338
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHL-MELEPDSATPYVVLS 541
G ++G G+ ++ + + + L+P+ T VLS
Sbjct: 339 RDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFLGVLS 384
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 149/357 (41%), Gaps = 55/357 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+V N L+ Y+K G A ++F+ ++ +W +M+ GY K+G + EA +F +MP
Sbjct: 139 DTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLMEEAVNLFYQMP 198
Query: 130 EKNVVAWTAMVDGY-MKVDCF-EDG----------------------------------- 152
E + V+W +++ G+ + +D + DG
Sbjct: 199 EPDTVSWNSIIAGFGILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSL 258
Query: 153 -FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
F LF M + + ++ + +AC G QVH + G++ + I S+I
Sbjct: 259 VFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLID 318
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDF 265
+Y + G +++ +F S+RD V + +I G NG EA F+ M P +
Sbjct: 319 LYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNE-- 376
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMP-----EKDDVTWTAIISGFVNNEQYEEAFRWFI 320
+++ +++ G +E++ +F M E + I+ ++EA
Sbjct: 377 ITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEELIA 436
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
EM P+Q +S+L A T + A + + D SI +L ++Y+
Sbjct: 437 EM---PFEPDQTIWNSLLGA-CGTHKKTELVNFIAERLLTTLPEDPSILVTLSNVYA 489
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 15/230 (6%)
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
SV+ G +HAH++K+ + +DV N+L+++Y + DA R+F ER
Sbjct: 8 SVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLER 67
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACNHVGLVEEG-FI 453
N+ ++ +MIS ++ +G + AL + +M + + PN + +VL AC VG +E G I
Sbjct: 68 NVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLI 127
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAGRT 512
+ + + N+ ++D+ + GSL+ A + + + P W ++ G G+
Sbjct: 128 HGRVFRA--NLGFDTVLMNTLLDMYVKCGSLSSARKVFDDI-LCPSSTSWNTMISGYGKE 184
Query: 513 HLNLDLAKLAAQHLMELEPDSAT------PYVVLSDLYSVIGKKRDGNRV 556
L + L Q EPD+ + + +L DLY+ GK +D R+
Sbjct: 185 GLMEEAVNLFYQM---PEPDTVSWNSIIAGFGILIDLYANDGKIKDALRL 231
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 180/571 (31%), Positives = 295/571 (51%), Gaps = 52/571 (9%)
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
A ++ D+ +++D Y K + +A IF MP +++VAW AM+ GY +
Sbjct: 37 IHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAV 96
Query: 154 DLFLSMRRGGMAF--NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD--------- 202
LSM+ N+ TL L + +G VH R +
Sbjct: 97 AHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTD 156
Query: 203 -IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++LG +++ MY + G + A +VF M R+ V+W++LI G+V + +A+ LF+ M
Sbjct: 157 GVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAML 216
Query: 262 GK----------------------------------------DFVSWTTMITGFSSKGNL 281
+ D + ++++ ++ G +
Sbjct: 217 AQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLI 276
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+++I LF+ M KD V+++A++SG+V N + EEAF F +M +V P+ T+ S++ A
Sbjct: 277 DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 336
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ A L G H V+ + S+ SI N+L+ +Y+KCG + + ++F + R+IVS+N
Sbjct: 337 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWN 396
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MI+G+ +GLG+EA LF +M + G P+ +TF+ +LSAC+H GLV EG +F M
Sbjct: 397 TMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHG 456
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y + P EHY CMVD+L R G L EA + I SM VW ALLGA R + N+DL K
Sbjct: 457 YGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKK 516
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
++ + EL P+ +V+LS++YS G+ + VR+ +K++ +KSPGCSWI + +H
Sbjct: 517 VSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLH 576
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
F+ G +S EI L I G K+ +
Sbjct: 577 AFVGGDQSHPQSPEIYRELDNILVGIKKLGY 607
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 220/470 (46%), Gaps = 71/470 (15%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA---RWRDSVCS------- 74
+A IFATMP R+ V++ AM+ G+ GM++ A ++M R R + +
Sbjct: 63 DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPL 122
Query: 75 ----NALISGYLKVGRCEEAA----RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
AL G C A R ++ + V+ +++D Y K G ++ AR +FD
Sbjct: 123 LAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 182
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT-LTILFEACGRFFRYR 185
MP +N V W+A++ G++ F LF +M G+ F S T + AC R
Sbjct: 183 AMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLR 242
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G Q+H L+++ G D+ GNS+++MY + G +D+A +F M+ +D VS+++L+SGYV
Sbjct: 243 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 302
Query: 246 HNGEIEEAYRLFERM----------------PGKDFVS---------WTTMITGFSSK-- 278
NG EEA+ +F++M P ++ + +I G +S+
Sbjct: 303 QNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETS 362
Query: 279 ------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
G ++ S ++FNMMP +D V+W +I+G+ + +EA F+EM
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQ-----IHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
P+ +T +LSA + + + +G H + + ME + +V L S+ G
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI----CMVDLLSRGGF 478
Query: 382 VVDAYRIFTNI----DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ +AY ++ D R V+ + LG++ + +++ EG
Sbjct: 479 LDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 528
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 165/347 (47%), Gaps = 56/347 (16%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M R +A N+ T +AC + G +H G D+ + +++ MY +
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------------ 260
+ +A +F+ M RD V+WN++++GY H+G A M
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 261 -------------------------PGKDFVSWTT--------MITGFSSKGNLEKSIEL 287
P ++ S T ++ ++ G+L + +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD---VRPNQLTLSSVLSASAAT 344
F+ MP +++VTW+A+I GFV + +AF F ML + + P +++S L A A+
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASL 238
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L G Q+HA + K + +D++ NSL+S+Y+K G + A +F + ++ VSY++++
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 298
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
SG+ QNG EEA +F+KM+ + P+ T +S++ AC+H+ ++ G
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 345
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 162/325 (49%), Gaps = 19/325 (5%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISG- 80
S+ A +F MP RN V+++A+I GFV +A L+ M A+ + ++ S
Sbjct: 173 SLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASAL 232
Query: 81 -------YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+L++G + A + ++ V D+ A S++ Y K G + +A +FD+M K+
Sbjct: 233 RACASLDHLRMGE-QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDT 291
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+++A+V GY++ E+ F +F M+ + ++ T+ L AC + G HG
Sbjct: 292 VSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGS 351
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V G + + N++I MY + G +D + +VF+MM RD VSWN++I+GY +G +EA
Sbjct: 352 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 411
Query: 254 YRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIIS 304
LF M F V++ +++ S G + + F++M +T + ++
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVD 471
Query: 305 GFVNNEQYEEAFRWFIEM-LRKDVR 328
+EA+ + M LR DVR
Sbjct: 472 LLSRGGFLDEAYEFIQSMPLRADVR 496
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 180/559 (32%), Positives = 304/559 (54%), Gaps = 40/559 (7%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+ +L Y++ GR +A ++F+ M EKDVV +++ GY +KG + E I +M
Sbjct: 150 DAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEME 209
Query: 130 ----EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
E N+V+W ++ G+ + ++ +F M G + +T++ + + G
Sbjct: 210 KSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLN 269
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G Q+HG V + G D + ++++ MYG+ SG+V
Sbjct: 270 MGRQIHGYVIKQGLLKDKCVISAMLDMYGK--------------------------SGHV 303
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTA 301
+ +LF+ + ITG S G ++K++E+F + E+ + V+WT+
Sbjct: 304 YG-----IIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTS 358
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
II+G N + EA F EM V+PN++T+ S+L A A L G H V+++
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ DV + ++L+ +Y+KCG + + +F + +N+V +NS+++G++ +G +E +++F
Sbjct: 419 LLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFE 478
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
+ L P+ I+F S+LSAC VGL +EG+ YF M Y I+P EHY+CMV++LGRA
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRA 538
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L EA DLI + FEP VWGALL + R N+DLA++AAQ L LEP++ YV++S
Sbjct: 539 GKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMS 598
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
++Y+ G + + +R K + ++K+PGCSWI +K+KV+ LA KS + +I +
Sbjct: 599 NIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMD 658
Query: 602 TISKGT-KEFDWPKHDWSL 619
IS+ K P D++L
Sbjct: 659 EISEEMRKSGHRPNLDFAL 677
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 180/399 (45%), Gaps = 62/399 (15%)
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
+ ARI ++ + D ++ Y +A I +P+ V ++++++ K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
F +F M G+ ++ L LF+ C ++ G Q+H + G D D +
Sbjct: 96 LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS 267
S+ MY R G M +A KVF MS++D V+ ++L+ GY G +EE R+ M
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEM------- 208
Query: 268 WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
K +E +I +N I+SGF + ++EA F +M
Sbjct: 209 ---------EKSGIEPNIVSWN-----------GILSGFNRSGYHKEAVIMFQKMHHLGF 248
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+Q+T+SSVL + + LN G QIH +V+K + D + ++++ +Y K G+V +
Sbjct: 249 CPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIK 308
Query: 388 IFTNID-----------------------------------ERNIVSYNSMISGFAQNGL 412
+F + E N+VS+ S+I+G AQNG
Sbjct: 309 LFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGK 368
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
EAL LFR+M+ G+ PN++T S+L AC ++ + G
Sbjct: 369 DIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHG 407
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 64/276 (23%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+Y ++F M A ITG R G+ +A E++ G
Sbjct: 303 VYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMF------------------GLF 344
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
K E +E +VV+W S++ G + G+ IEA E+F +M
Sbjct: 345 K-----------EQKMELNVVSWTSIIAGCAQNGKDIEALELFREM-------------- 379
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ G+ N +T+ + ACG G HG R D
Sbjct: 380 -----------------QVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDD 422
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP- 261
+ +G+++I MY + G + + VF+MM ++ V WNSL++GY +G+ +E +FE +
Sbjct: 423 VHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMR 482
Query: 262 ---GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
DF+S+T++++ G ++ + FNMM E+
Sbjct: 483 TRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEE 518
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 94/191 (49%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I +S+ + + +P+ +++++I + + ++ F M + P+
Sbjct: 56 LIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPD 115
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
L ++ A + G QIH ++ D +Q SL +Y +CG + DA ++F
Sbjct: 116 THVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFD 175
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ E+++V+ ++++ G+A+ G EE + + +M+ G+ PN +++ +LS N G +E
Sbjct: 176 RMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKE 235
Query: 451 GFIYFKSMKTL 461
I F+ M L
Sbjct: 236 AVIMFQKMHHL 246
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 49/101 (48%)
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
+Q HA ++K ++D I L++ YS DA I +I + + S++S+I +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKA 94
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
L +++ +F +M GL+P+ ++ C + + G
Sbjct: 95 KLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAG 135
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 271/494 (54%), Gaps = 41/494 (8%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLG 217
++RG + + + L + C R + +G VH LV D ++L N I+ MY + G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------- 260
+D+A ++F M +D V+W +LI+G+ N +A LF +M
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 261 ---------PGKDFVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
PG ++ + ++ ++ G+++ + F+ MP K +V+
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISG + E A +M RK+ +P T SSVLSA A+ L QG +HAH++
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI 317
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K ++ I N+L+ +Y+K G++ DA R+F + + ++VS+N+M++G AQ+GLG+E L+
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
F +M G+ PN+I+FL VL+AC+H GL++EG YF+ MK Y +EP HY VD+L
Sbjct: 378 RFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLL 436
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR G L A I M EP VWGALLGA R H N++L AA+ EL+P + P +
Sbjct: 437 GRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRM 496
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
+LS++Y+ G+ RD +VR K ++K P CSW+ +++ VHLF+A ++ +KEI
Sbjct: 497 LLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRG 556
Query: 599 TLQTISKGTKEFDW 612
+ IS KE +
Sbjct: 557 KWEEISGKIKEIGY 570
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 161/347 (46%), Gaps = 39/347 (11%)
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
G ++ GR A + ++ +V +V+ Y K G + +AR +FD+MP K++V WTA+
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ G+ + + D LF M R G N TL+ L +A G G Q+H ++G+
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY 220
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ +G++++ MY R G MD A F M + VSWN+LISG+ GE E A L +
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280
Query: 260 MPGKDFV----------------------SW-----------------TTMITGFSSKGN 280
M K+F W T++ ++ G+
Sbjct: 281 MQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGS 340
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
++ + +F+ + + D V+W +++G + +E F +MLR + PN+++ VL+A
Sbjct: 341 IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+ + L++G + K +E DV + V L + G + A R
Sbjct: 401 CSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAER 447
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 20/282 (7%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNAL-ISGYLK 83
+A +F MP ++ V++ A+I GF + +A L+ P R N +S LK
Sbjct: 141 DARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLF---PQMLRLGFQPNHFTLSSLLK 197
Query: 84 VGRCEEA--------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
E A + + V ++VD Y + G + A+ FD MP K+ V+
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W A++ G+ + E L M+R T + + AC +G VH +
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI 317
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ G +GN+++ MY + G +D+A +VF + K D VSWN++++G +G +E
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 256 LFERM------PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
FE+M P + +S+ ++T S G L++ + F +M
Sbjct: 378 RFEQMLRIGIEPNE--ISFLCVLTACSHSGLLDEGLYYFELM 417
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 118/253 (46%), Gaps = 12/253 (4%)
Query: 21 CSIYEAFEI-FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNAL 77
C +A ++ F MP ++ VS+ A+I+G R+G A L M + +++
Sbjct: 237 CGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSV 296
Query: 78 ISGYLKVGRCEEAARIFEAMVEK--DVVAW--GSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+S +G E+ + M++ ++A+ +++D Y K G + +A+ +FD++ + +V
Sbjct: 297 LSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W M+ G + ++ D F M R G+ N I+ + AC EG+ L
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIE- 251
+ ++ + D+ + + + GR+G +D A + M + A W +L+ + +E
Sbjct: 417 MKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMEL 476
Query: 252 ---EAYRLFERMP 261
A R FE P
Sbjct: 477 GVYAAERAFELDP 489
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 191/644 (29%), Positives = 332/644 (51%), Gaps = 51/644 (7%)
Query: 12 MITALINN--NCSIYE-AFEIFATMPMRNAVS-YAAMITGFVRRGMFYEAEELY---VNM 64
+ LIN +C +Y+ A +F M +S + ++ G+ + M+ EA EL+ ++
Sbjct: 40 LCKTLINQYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHY 99
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIE 120
P DS ++ + R I +++ D+V S+V Y K +
Sbjct: 100 PYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEK 159
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F++MPEK+V W ++ Y + F+D + F MRR G NS+T+T +C R
Sbjct: 160 AIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCAR 219
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G+++H + GF D + ++++ MYG+ G ++ A ++F M K+ V+WNS+
Sbjct: 220 LLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSM 279
Query: 241 ISGYVHNGEIEEAYRLFERM------PGKDFVSWTTMITGFSSK---------------- 278
ISGY G+I +LF+RM P +S M+ S++
Sbjct: 280 ISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRI 339
Query: 279 -----------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
G +E + ++F ++P+ V+W +ISG+V + EA F E
Sbjct: 340 QPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSE 399
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + V + +T +SVL+A + A L +G +IH +++ ++++ + +L+ +Y+KCG
Sbjct: 400 MRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGA 459
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
V +A+ +F + +R++VS+ SMI+ + +G AL LF +M + P+++ FL++LSA
Sbjct: 460 VDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSA 519
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLI-NSMTFEPPP 500
C H GLV+EG YF M +Y I P EHY+C++D+LGRAG L EA +++ +
Sbjct: 520 CGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDV 579
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
+ L A R H N+DL A+ L++ +PD ++ Y++LS++Y+ K + VR K
Sbjct: 580 ELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKM 639
Query: 561 KLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
K ++K+PGCSWI + K+ F S L L+ + L +S
Sbjct: 640 KELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLS 683
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 222/465 (47%), Gaps = 59/465 (12%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLF 156
++ D+ ++++ Y A+ +FD M + W ++ GY K + + +LF
Sbjct: 34 LQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELF 93
Query: 157 LSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
+ + +S T +F+ACG RY G +H + + G DI++G+S++ MYG+
Sbjct: 94 EKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGK 153
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTM 271
++A +F+ M ++D WN++IS Y +G ++A F M F V+ TT
Sbjct: 154 CNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTA 213
Query: 272 ITG-----------------------------------FSSKGNLEKSIELFNMMPEKDD 296
I+ + G+LE +IE+F MP+K
Sbjct: 214 ISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTV 273
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V W ++ISG+ + F M + V+P TLSS++ + +A L +G +H +
Sbjct: 274 VAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGY 333
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
++ ++ DV + +SL+ LY KCG V A +IF I + +VS+N MISG+ G EA
Sbjct: 334 TIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEA 393
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN--IEPGPEH---- 470
L LF +M+ + + ITF SVL+AC+ + +E+G K ++N IE ++
Sbjct: 394 LGLFSEMRKSYVESDAITFTSVLTACSQLAALEKG-------KEIHNLIIEKKLDNNEVV 446
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTH 513
++D+ + G++ EA + + P + W +++ A +H
Sbjct: 447 MGALLDMYAKCGAVDEAFSVFKCL---PKRDLVSWTSMITAYGSH 488
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 28/233 (12%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L +L A + +L QG IH VV + +++D+ + +L++ Y C A +F N++
Sbjct: 6 LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNME 65
Query: 394 ERNIVS-YNSMISGFAQNGLGEEALNLFRKMKD-EGLVPNQITFLSVLSACN-------- 443
+S +N +++G+ +N + EAL LF K+ L P+ T+ SV AC
Sbjct: 66 NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLG 125
Query: 444 ---HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
H L++ G + +I G + +V + G+ + +AI L N M E
Sbjct: 126 KMIHTCLIKTGL--------MMDIVVG----SSLVGMYGKCNAFEKAIWLFNEMP-EKDV 172
Query: 501 GVWGALLGAGRTHLNLD--LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
W ++ N L EP+S T +S ++ R
Sbjct: 173 ACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNR 225
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 189/569 (33%), Positives = 294/569 (51%), Gaps = 43/569 (7%)
Query: 84 VGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
VG CE A + ++ DV + VD + K V A ++F++MPE++ W AM+ G
Sbjct: 68 VGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG 127
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + + F LF MR + +S+T+ L ++ + +H + R G D
Sbjct: 128 FCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ 187
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSK--RDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ + N+ I+ YG+ G +D A VF + + R VSWNS+ Y GE +A+ L+ M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 261 ---------------------------------------PGKDFVSWTTMITGFSSKGNL 281
+D + T I+ +S +
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ LF++M + V+WT +ISG+ +EA F M++ +P+ +TL S++S
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 342 AATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+L G I A + D V I N+L+ +YSKCG++ +A IF N E+ +V++
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
+MI+G+A NG+ EAL LF KM D PN ITFL+VL AC H G +E+G+ YF MK
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
+YNI PG +HY+CMVD+LGR G L EA++LI +M+ +P G+WGALL A + H N+ +A+
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
AA+ L LEP A PYV ++++Y+ G R+R K + I+K PG S I + K
Sbjct: 548 QAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Query: 581 HLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
H F G ++ + I TL +S K+
Sbjct: 608 HSFTVGEHGHVENEVIYFTLNGLSLFAKD 636
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 196/439 (44%), Gaps = 64/439 (14%)
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
LF M+RGG N+ T + +AC R VH + + F D+ +G + + M+
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
+ +D A KVF M +RDA +WN+++SG+ +G ++A+ LF M + + +
Sbjct: 99 KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT 158
Query: 275 FSSKGNLEKSIELFNMMP-----------------------------------------E 293
+ EKS++L M +
Sbjct: 159 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 218
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+ V+W ++ + + +AF + MLR++ +P+ T ++ ++ TL QG I
Sbjct: 219 RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLI 278
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H+H + + + D+ N+ +S+YSK + A +F + R VS+ MISG+A+ G
Sbjct: 279 HSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM 338
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
+EAL LF M G P+ +T LS++S C G +E G I+ + Y C
Sbjct: 339 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG----------KWIDARADIYGC 388
Query: 474 ----------MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAGRTHLNLDLAKLA 522
++D+ + GS+ EA D+ ++ T E W ++ G + L+ KL
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDN-TPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 523 AQHL-MELEPDSATPYVVL 540
++ + ++ +P+ T VL
Sbjct: 448 SKMIDLDYKPNHITFLAVL 466
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/515 (24%), Positives = 223/515 (43%), Gaps = 95/515 (18%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ A ++F MP R+A ++ AM++GF + G +A L+ M R + + +
Sbjct: 102 SVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM--RLNEITPDSVTVMTL 159
Query: 82 LKVGRCEEAARIFEAM--------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EK 131
++ E++ ++ EAM V+ V + + Y K G + A+ +F+ + ++
Sbjct: 160 IQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDR 219
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
VV+W +M Y D F L+ M R + T L +C +G +H
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIH 279
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
G D DI N+ I+MY + A +F +M+ R VSW +ISGY G+++
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMD 339
Query: 252 EAYRLFERM----PGKDFVSWTTMITG--------------------------------- 274
EA LF M D V+ ++I+G
Sbjct: 340 EALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNAL 399
Query: 275 ---FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
+S G++ ++ ++F+ PEK VTWT +I+G+ N + EA + F +M+ D +PN
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNH 459
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+T +VL A A + +L +G + + H++K Y I
Sbjct: 460 ITFLAVLQACAHSGSLEKGWE-YFHIMK------------------------QVYNISPG 494
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN---HVGLV 448
+D Y+ M+ + G EEAL L R M + P+ + ++L+AC +V +
Sbjct: 495 LDH-----YSCMVDLLGRKGKLEEALELIRNMSAK---PDAGIWGALLNACKIHRNVKIA 546
Query: 449 EEGFIYFKSMKTLYNIEPG-PEHYACMVDILGRAG 482
E+ + ++L+N+EP Y M +I AG
Sbjct: 547 EQ------AAESLFNLEPQMAAPYVEMANIYAAAG 575
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 77/143 (53%)
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W I VN E+ F EM R PN T V A A A + +HAH++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K SDV + + V ++ KC +V A ++F + ER+ ++N+M+SGF Q+G ++A +
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 419 LFRKMKDEGLVPNQITFLSVLSA 441
LFR+M+ + P+ +T ++++ +
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQS 162
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 10 NAMI-TALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM- 64
N MI ALI+ + C SI+EA +IF P + V++ MI G+ G+F EA +L+ M
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 65 -----PARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCK 114
P + + A++ G E+ F M + + + MVD +
Sbjct: 452 DLDYKP----NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 507
Query: 115 KGRVIEAREIFDKMPEK-NVVAWTAMVDG 142
KG++ EA E+ M K + W A+++
Sbjct: 508 KGKLEEALELIRNMSAKPDAGIWGALLNA 536
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 307/582 (52%), Gaps = 39/582 (6%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I+ A IF + N + MI G+ + + M R R S + +
Sbjct: 102 IHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQM-IRNRAEFDSGSFVFALK 160
Query: 83 KVGRCEEA-------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G+ E + I++ + D+ ++ Y + G + AR++FD+ K+VV
Sbjct: 161 ACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVT 220
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT M++GY + + ++ LF SM + N +T+ L AC + G +H +
Sbjct: 221 WTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIR 280
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R + L N+++ MY + G + A ++F+ M +RD SW SL++GY NG++ A +
Sbjct: 281 RKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARK 340
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
LF+ MP ++ VSW MI G+S +++ELF+ M + + G V
Sbjct: 341 LFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVD---------VVGLV-------- 383
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA-HVVKMNMESDVSIQNSLVS 374
P + TL VLSAS L G +IH HV K+ ++ + ++N+++
Sbjct: 384 -------------PTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMD 430
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+KCG++ A ++F ++ E+N+VS+NSMIS +A G ++AL LF +M GL P+ IT
Sbjct: 431 MYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHIT 490
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F+ VLSAC++ G V EG +F+SM+ + +EP EHYACMVD+L R G L EA +LI+ M
Sbjct: 491 FIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRM 550
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
E G WGALL A R H N+++AKLA + L+EL+P+ + Y +L+++ + K +D
Sbjct: 551 PMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVR 610
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
VR + + ++K PG S I ++ K H FL S EI
Sbjct: 611 MVRRMMRERGVKKVPGHSLIEIEGKFHEFLVADTSHTRSSEI 652
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 163/309 (52%), Gaps = 24/309 (7%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYVN 63
++ MI NN + EA +F +M N V+ A+++ ++G + L+ +
Sbjct: 220 TWTTMINGYARNNW-LDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEH 278
Query: 64 MPARWRDSVCS----NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
+ R +D CS NA++ Y+K G A IF M +DV +W S+++GY K G +
Sbjct: 279 I--RRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLG 336
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEAC 178
AR++FD+MPE+N+V+W AM+ GY + + +LF +M G+ TL + A
Sbjct: 337 SARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSAS 396
Query: 179 GRFFRYREGVQVH-GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
G+ G ++H V++ G +IL N+++ MY + G +D A K+F M +++ VSW
Sbjct: 397 GQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSW 456
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMIT-----GFSSKG--NLEKSIE 286
NS+IS Y G ++A LF++M G D +++ +++ GF S+G + E
Sbjct: 457 NSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMEN 516
Query: 287 LFNMMPEKD 295
F + P+++
Sbjct: 517 CFGVEPKRE 525
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 125/273 (45%), Gaps = 16/273 (5%)
Query: 237 WNSLISGYVHNGEI---EEAYRLFERMPGKDFVSWTTMIT------------GFSSKGNL 281
WNSL + ++ N + + +F+ + ++ T ++ S G++
Sbjct: 43 WNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDI 102
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ +F+ + W +I G+ F +F +M+R + + L A
Sbjct: 103 HYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKAC 162
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
A G +H+ + K +SD+ +QN L+ Y + G + A ++F +++V++
Sbjct: 163 GQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWT 222
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MI+G+A+N +EA+ LF M + PN++T +++LSAC+ G E G + ++
Sbjct: 223 TMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRR- 281
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+I M+D+ + G L A ++ N+M
Sbjct: 282 KDITCSLNLLNAMLDMYVKCGCLTTAREIFNNM 314
>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
Length = 794
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 322/596 (54%), Gaps = 23/596 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
+A ++F +P RNAV++ A++ G+V+ GM EA L M P R S C +A
Sbjct: 190 DARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASA 249
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G ++ G+ A I + E D + S+++ YCK G + A IFD M EK+VV W
Sbjct: 250 NMGGIEEGKQSHAIAIVNGL-ELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWN 308
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ GY++ E+ + MRR + F+ +TL+ L A + G ++ R
Sbjct: 309 LLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRH 368
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G + DI+L ++ + MY + G + A KVF ++D + WN+L+S Y +G EA RLF
Sbjct: 369 GLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLF 428
Query: 258 -----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVN 308
E +P + ++W +I G + ++ E+F M + ++WT +++G V
Sbjct: 429 YEMQLESVP-PNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQ 487
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES-DVS 367
N EEA + +M +RPN T++ LSA A A+L+ G IH ++++ S S
Sbjct: 488 NGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFSAS 547
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I+ SLV +Y+KCG++ A R+F + + YN+MIS +A G EA+ L+R ++D G
Sbjct: 548 IETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGG 607
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
+ P+ IT S+LS CN+ V + F M + + ++P EHY MVD+L AG +A
Sbjct: 608 VKPDNITITSLLS-CNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKA 666
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ L+ M ++P + +L + +L + ++HL+E EPD++ YV++S+ Y+V
Sbjct: 667 LRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNAYAVE 726
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILK---DKVHLFLAGRKSCLDLKEIEVTL 600
G + ++R K+K ++K PGCSWI +K + VH+F+A K+ L EI+ L
Sbjct: 727 GSWDEVAKMREMMKVKGLKKKPGCSWIQIKGEEEGVHVFVANDKTHLRNDEIQRML 782
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 256/526 (48%), Gaps = 64/526 (12%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
SY +++L N I EA + M RN + I G + +G YE
Sbjct: 1 SYFHRVSSLCKNG-EIREALSLVTEMDYRN-IRIGPEIYGEILQGCVYE----------- 47
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
RD + + LK G + AR +E +V + Y K + A+ +F K
Sbjct: 48 -RDLCTGQQIHAQILKKG--DFYAR--NEYIETKLVIF------YAKCDALEIAQVLFSK 96
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
+ +NV +W A++ ++ E F+ M G+ ++ + + +ACG R G
Sbjct: 97 LRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFG 156
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
VHG V++ G + + + +S+ MYG+ G +D+A KVF + R+AV+WN+L+ GYV N
Sbjct: 157 RGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQN 216
Query: 248 GEIEEAYRLFERM--------------------------PGK-------------DFVSW 268
G EEA RL M GK D +
Sbjct: 217 GMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILG 276
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T+++ + G +E + +F+ M EKD VTW +ISG+V EEA M R++++
Sbjct: 277 TSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLK 336
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ +TLS+++SA+ +T L G +I + ++ +ESD+ + ++ V +Y+KCG++V+A ++
Sbjct: 337 FDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKV 396
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + +++++ +N+++S +A +GL EAL LF +M+ E + PN IT+ ++ + G V
Sbjct: 397 FDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQV 456
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
E F M++ I P + M++ L + G EAI + M
Sbjct: 457 NEAKEMFLQMQS-SGIFPNLISWTTMMNGLVQNGCSEEAILFLRKM 501
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/586 (29%), Positives = 298/586 (50%), Gaps = 71/586 (12%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N L+S Y K R A R+F+ M ++++ +W +++ Y K + E +F MP +++V
Sbjct: 48 NNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMV 107
Query: 135 AWTAMVDGYMKVDCFEDGFDLF-LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+W +++ Y + L + G N I L+ + + G+QVHG
Sbjct: 108 SWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGH 167
Query: 194 VSRFGFDYDIILGNSIITMYGRLGF-------------------------------MDEA 222
V +FGF + +G+ ++ MY + G ++++
Sbjct: 168 VVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDS 227
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM---------------------- 260
++F M ++D++SW ++I+G+ NG EA LF M
Sbjct: 228 RQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGV 287
Query: 261 ----PGKDFVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
GK ++ + ++ + +++ + +F M K+ V+WTA++
Sbjct: 288 MALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAML 347
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
G+ N EEA + F +M + P+ TL SV+S+ A A+L +G+Q H + +
Sbjct: 348 VGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI 407
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
S +++ N+LV+LY KCG++ D++R+F+ + + VS+ +++SG+AQ G E L LF M
Sbjct: 408 SFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESM 467
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGS 483
G P+++TF+ VLSAC+ GLV++G F+SM + I P +HY CM+D+ RAG
Sbjct: 468 LAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGR 527
Query: 484 LAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
L EA IN M F P W +LL + R H N+++ K AA+ L++LEP + Y++LS +
Sbjct: 528 LEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSI 587
Query: 544 YSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
Y+ GK + +R + K +RK PGCSWI K++VH+F A +S
Sbjct: 588 YAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQS 633
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 235/502 (46%), Gaps = 72/502 (14%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
I +A ++ ++V Y K R+ AR +FD+MP++N+ +W ++ Y K+ C
Sbjct: 33 CHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLP 92
Query: 151 DGFDLF--------------------------------LSMRRGGMAFNSITLTILFEAC 178
+ +F L + G N I L+ +
Sbjct: 93 EMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILA 152
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ G+QVHG V +FGF + +G+ ++ MY + G + A + F M +++ V +N
Sbjct: 153 SKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYN 212
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
+LI+G + IE++ +LF M KD +SWT MI GF+ G ++I+LF
Sbjct: 213 TLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFR--------- 263
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
EM +++ +Q T SVL+A L +G Q+HA+++
Sbjct: 264 ----------------------EMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYII 301
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ + + ++ + ++LV +Y KC ++ A +F ++ +N+VS+ +M+ G+ QNG EEA+
Sbjct: 302 RTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVK 361
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
+F M++ G+ P+ T SV+S+C ++ +EEG F + + +V +
Sbjct: 362 IFCDMQNNGIEPDDFTLGSVISSCANLASLEEG-AQFHCRALVSGLISFITVSNALVTLY 420
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPDSA 534
G+ GS+ ++ L + M++ W AL+ G+ + L L + H +PD
Sbjct: 421 GKCGSIEDSHRLFSEMSYVDEVS-WTALVSGYAQFGKANETLRLFESMLAH--GFKPDKV 477
Query: 535 TPYVVLSDLYSVIGKKRDGNRV 556
T VLS S G + GN++
Sbjct: 478 TFIGVLSAC-SRAGLVQKGNQI 498
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 196/411 (47%), Gaps = 71/411 (17%)
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
FNS++L+ + C R+ ++H + + + +I L N++++ Y + + A +V
Sbjct: 9 FNSMSLSNHY--CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRV 66
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSI 285
F M +R+ SWN+L+S Y + E R+F MP +D VSW ++I+ ++ +G L +S+
Sbjct: 67 FDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSV 126
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+ +N+M + +G N N++ LS++L ++
Sbjct: 127 KAYNLM----------LYNGPFN--------------------LNRIALSTMLILASKQG 156
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS--- 402
++ G Q+H HVVK +S V + + LV +YSK G V A + F + E+N+V YN+
Sbjct: 157 CVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIA 216
Query: 403 ----------------------------MISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
MI+GF QNGL EA++LFR+M+ E L +Q T
Sbjct: 217 GLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYT 276
Query: 435 FLSVLSACNHVGLVEEG-FIYFKSMKTLY--NIEPGPEHYACMVDILGRAGSLAEAIDLI 491
F SVL+AC V ++EG ++ ++T Y NI G + +VD+ + S+ A +
Sbjct: 277 FGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVG----SALVDMYCKCKSIKSAETVF 332
Query: 492 NSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME-LEPDSATPYVVLS 541
M + L+G G+ + + K+ +EPD T V+S
Sbjct: 333 RKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVIS 383
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 281/474 (59%), Gaps = 4/474 (0%)
Query: 116 GRVIEAREIFDKMP-EKNVVAWTAMVDGYMKVDCFEDGFDLFLSM--RRGGMAFNSITLT 172
G + A+++FD + +N +T M+ Y + F + M + + N T T
Sbjct: 80 GSLNYAQKLFDTVDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTFT 139
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD-EANKVFSMMSK 231
+F AC +F EG Q H + +F F++ + NS++ YG++G + +VF +
Sbjct: 140 YVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEG 199
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
D VSWN LI+GYV +G+++EA RLF+ MP +D VSWT M+ G++ G L ++ LF+ M
Sbjct: 200 PDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEM 259
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
P+++ V+W+A+I G++ Y +A F EM V+ +++ ++++LSA A L+QG
Sbjct: 260 PKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGR 319
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
+H ++ K ++ D + +L+ +YSKCG + A+++F ++ + ++SMI G A +
Sbjct: 320 WLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHS 379
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
GE+A+ LF KM + G+ P++IT++++L+AC H GLV+ G F M +P +HY
Sbjct: 380 FGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHY 439
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEP 531
C+VD+LGRAG L +A ++ +M + P +W ALL A + H N++L + + L+++EP
Sbjct: 440 GCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRILIKMEP 499
Query: 532 DSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
+ YV+ S++Y+ + + ++R + K++ ++K+PGCS I L VH F++
Sbjct: 500 QNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELNGAVHEFVS 553
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 157/309 (50%), Gaps = 16/309 (5%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V N LI+GY+K G +EA R+F+ M E+DVV+W M+ GY G + EA +FD+MP
Sbjct: 201 DVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEMP 260
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
++N+V+W+A++ GY+++ C+ +LF M+ + + + +T L AC R +G
Sbjct: 261 KRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRW 320
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + + G D L ++I MY + G +D A KVF + W+S+I G +
Sbjct: 321 LHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSF 380
Query: 250 IEEAYRLFERM------PGKDFVSWTTMITGFSSKGNLEKSIELFNMM-----PEKDDVT 298
E+A LF +M P + +++ ++ + G ++ +++FN M P+
Sbjct: 381 GEKAIELFAKMIECGIEPSE--ITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQH 438
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
+ I+ +AFR M V+ + ++LSA + G Q+ ++
Sbjct: 439 YGCIVDLLGRAGLLHDAFRVVETM---PVKADPAIWRALLSACKLHRNVELGEQVGRILI 495
Query: 359 KMNMESDVS 367
KM ++D++
Sbjct: 496 KMEPQNDMN 504
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 117/252 (46%), Gaps = 11/252 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+ M+ + + EA +F MP RN VS++A+I G+++ G + +A EL
Sbjct: 228 MPERDVVSWTIMLVGYADAGF-LSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALEL 286
Query: 61 YVNMP-ARWR-DSVCSNALISGYLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYC 113
+ M A+ + D V L+S ++G ++ R ++K D +++D Y
Sbjct: 287 FKEMQVAKVKMDEVIVTTLLSACARLGALDQ-GRWLHMYIDKHGIKVDAHLSTALIDMYS 345
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K GR+ A ++F + +K V W++M+ G E +LF M G+ + IT
Sbjct: 346 KCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITYIN 405
Query: 174 LFEACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-K 231
+ AC G+Q+ + +V + I+ + GR G + +A +V M K
Sbjct: 406 ILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVK 465
Query: 232 RDAVSWNSLISG 243
D W +L+S
Sbjct: 466 ADPAIWRALLSA 477
>gi|356561520|ref|XP_003549029.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Glycine max]
Length = 506
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 263/492 (53%), Gaps = 37/492 (7%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++F++M + V + T M+ G++K C ED LF M + N T L +
Sbjct: 34 ACQLFEEMSDLTVASATTMIQGFVKRHCHEDAIYLFSKMLASKIRPNEFTFGTLINSSAA 93
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G Q+H + G + +G+S++ +Y + +++A K F + VS+ +L
Sbjct: 94 LGNVVVGKQLHACAMKIGLSCHVFVGSSLLDLYFKQSTIEDAQKAFGDTQHPNVVSYTTL 153
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I GY+ G E+A R+F MP ++ VSW M+ G S G
Sbjct: 154 ICGYLKRGRFEDALRVFHEMPERNVVSWNAMVGGCSQTG--------------------- 192
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
EEA +FI MLR+ PN+ T V+ A+A A+L G HA +K
Sbjct: 193 ----------HNEEAVNFFIGMLREGFIPNESTFPCVICAAANIASLGIGKSFHACAIKF 242
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+ D + NSL+S Y+KCG++ D+ +F + +RNIVS+N+MI G+AQNG G EA++ F
Sbjct: 243 LGKVDQFVGNSLISFYAKCGSMEDSLLMFDKLFKRNIVSWNAMICGYAQNGRGAEAISFF 302
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG---PEHYACMVDI 477
+M EG PN +T L +L ACNH GLV+EG+ YF + PG EHYACMV++
Sbjct: 303 ERMCSEGYKPNYVTLLGLLWACNHAGLVDEGYSYFNRARLE---SPGLLKSEHYACMVNL 359
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
L R+G AEA D + S+ F+P G W ALL + H N+ L +LAA+ +++L+PD + Y
Sbjct: 360 LARSGRFAEAEDFLQSVPFDPGLGFWKALLAGCQIHSNMRLGELAARKILDLDPDDVSSY 419
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
V+LS+ +S GK D VR + K K +++ PG SWI ++ +VH FL G ++ EI
Sbjct: 420 VMLSNAHSAAGKWSDVATVRTEMKEKGMKRIPGSSWIEVRGEVHAFLTGDQNHDKKDEIY 479
Query: 598 VTLQTISKGTKE 609
+ L + +E
Sbjct: 480 LLLNFFFEHLRE 491
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 142/298 (47%), Gaps = 9/298 (3%)
Query: 1 MADRTSASYNAMITALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA 57
M+D T AS MI + +C +IY ++ A+ N ++ +I G
Sbjct: 41 MSDLTVASATTMIQGFVKRHCHEDAIYLFSKMLASKIRPNEFTFGTLINSSAALGNVVVG 100
Query: 58 EELY-VNMPARWRDSV-CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
++L+ M V ++L+ Y K E+A + F +VV++ +++ GY K+
Sbjct: 101 KQLHACAMKIGLSCHVFVGSSLLDLYFKQSTIEDAQKAFGDTQHPNVVSYTTLICGYLKR 160
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
GR +A +F +MPE+NVV+W AMV G + E+ + F+ M R G N T +
Sbjct: 161 GRFEDALRVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIGMLREGFIPNESTFPCVI 220
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
A G H +F D +GNS+I+ Y + G M+++ +F + KR+ V
Sbjct: 221 CAAANIASLGIGKSFHACAIKFLGKVDQFVGNSLISFYAKCGSMEDSLLMFDKLFKRNIV 280
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFN 289
SWN++I GY NG EA FERM + ++V+ ++ + G +++ FN
Sbjct: 281 SWNAMICGYAQNGRGAEAISFFERMCSEGYKPNYVTLLGLLWACNHAGLVDEGYSYFN 338
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 319/627 (50%), Gaps = 51/627 (8%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI------ 78
EA+ +F M + VS+ M++ FV G + +A +LY M + V N
Sbjct: 169 EAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRM---IQTGVAPNEFTFVKLLA 225
Query: 79 -SGYLKVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
S +L + + A + +E ++V ++VD YCK + +A ++ E +V W
Sbjct: 226 ASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLW 285
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
TA++ G+ + F + F M G+ N+ T + + AC G Q+H V
Sbjct: 286 TAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVM 345
Query: 197 FGFDYDIILGNSIITMYGRLGFM-DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
G + D+ +GNS++ MY + M ++A + F ++ + +SW SLI+G+ +G EE+ +
Sbjct: 346 AGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIK 405
Query: 256 LFERMPG---------------------------------------KDFVSWTTMITGFS 276
+F M G D V ++ ++
Sbjct: 406 VFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYA 465
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G ++ + + +MM +D +T+T++ + +E A M + DVR + +L+S
Sbjct: 466 GLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLAS 525
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
LSA+A + G Q+H + VK + S +S+ N LV LY KCG + DA+R F I E +
Sbjct: 526 FLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPD 585
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
VS+N +I G A NG AL+ F M+ G+ P+QIT L VL AC+H GLV+ G YF+
Sbjct: 586 AVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQ 645
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
SM+ + I P +HY C+VD+LGRAG L EA+++I +M F+P ++ LLGA + H N+
Sbjct: 646 SMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNI 705
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
L + A+ +EL+P YV+L++LY G+ G + R + + +RK+PG SW+
Sbjct: 706 PLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEE 765
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTI 603
++ VHLF AG S + +I ++++
Sbjct: 766 RNMVHLFTAGDTSHPQIGKIHEKIESL 792
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 213/416 (51%), Gaps = 54/416 (12%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
RD +C ++ I +K+G ++D+ +++ Y K V EAR++FD+M
Sbjct: 32 RDGICIHSPI---IKMG------------FQEDMFLSNNLLSLYGKCFGVAEARQLFDEM 76
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P ++V +WT ++ Y K+ E+ +LF SM G N TL+ +C + G
Sbjct: 77 PCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGT 136
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+ LV++ GFD + +LG+++I Y + G EA +VF M+ D VSW ++S +V G
Sbjct: 137 RFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAG 196
Query: 249 EIEEAYRLFERM------PGK--------------------------------DFVSWTT 270
+A +L+ RM P + + V T
Sbjct: 197 SWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTA 256
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
++ + ++E ++++ + E D WTAIISGF + ++ EA F EM V PN
Sbjct: 257 LVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPN 316
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV-DAYRIF 389
T S +L+A ++ L+ G QIH+ VV +E+DVS+ NSLV +Y KC N++ DA R F
Sbjct: 317 NFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAF 376
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
I N++S+ S+I+GF+++GL EE++ +F M+ G+ PN T ++L AC +
Sbjct: 377 RGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTI 432
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 145/585 (24%), Positives = 262/585 (44%), Gaps = 68/585 (11%)
Query: 16 LINNNCSIY-------EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PA 66
L NN S+Y EA ++F MP R+ S+ +++ + + G EA EL+ +M
Sbjct: 52 LSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISG 111
Query: 67 RWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEA 121
+ + + + + R F+A+V K + V +++D Y K G EA
Sbjct: 112 EYPNEFTLSTALRSCSALREFNHGTR-FQALVTKSGFDSNPVLGSALIDFYSKCGCTQEA 170
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
+F+ M ++V+WT MV +++ + L+ M + G+A N T L A F
Sbjct: 171 YRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLL-AASSF 229
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
G VH + + + +++L +++ MY + +++A KV + + D W ++I
Sbjct: 230 LGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAII 289
Query: 242 SGYVHNGEIEEAYRLFERMP--------------------------GKDFVSWTTM--IT 273
SG+ + + EA F M GK S M +
Sbjct: 290 SGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLE 349
Query: 274 GFSSKGN------------LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
S GN +E ++ F + + ++WT++I+GF + EE+ + F
Sbjct: 350 NDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGA 409
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M VRPN TLS++L A +L Q ++H +++K N ++DV + N+LV Y+ G
Sbjct: 410 MQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGM 469
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
V DA+ + + + R++++Y S+ + Q G E ALN+ M + + + + S LSA
Sbjct: 470 VDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSA 529
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC----MVDILGRAGSLAEAIDLINSMTFE 497
+ ++E G K + Y+++ G + +VD+ G+ G + +A +T E
Sbjct: 530 AAGIPIMETG----KQLHC-YSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEIT-E 583
Query: 498 PPPGVWGALLG--AGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
P W L+ A H++ L+ L +EPD T +VL
Sbjct: 584 PDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVL 628
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 139/266 (52%), Gaps = 7/266 (2%)
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+LF+ MP +D +WT ++S + +EEA F ML PN+ TLS+ L + +A
Sbjct: 71 QLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALR 130
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
N G++ A V K +S+ + ++L+ YSKCG +AYR+F ++ +IVS+ M+S
Sbjct: 131 EFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVS 190
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
F + G +AL L+ +M G+ PN+ TF+ +L+A + +GL ++ M ++ IE
Sbjct: 191 SFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLM--MWRIE 248
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
+VD+ + S+ +A+ ++ +T E +W A++ L A + A H
Sbjct: 249 LNLVLKTALVDMYCKCQSIEDAVK-VSKLTLEYDVFLWTAIISGFTQSLKFREA-ITAFH 306
Query: 526 LMELE---PDSATPYVVLSDLYSVIG 548
ME P++ T +L+ S++
Sbjct: 307 EMETSGVVPNNFTYSGILNACSSILA 332
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 202/488 (41%), Gaps = 84/488 (17%)
Query: 14 TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------ 64
TAL++ C SI +A ++ + + A+I+GF + F EA + M
Sbjct: 255 TALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVV 314
Query: 65 PARWRDSVCSNALISGY-LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE-AR 122
P + S NA S L +G+ + +R+ A +E DV S+VD Y K +IE A
Sbjct: 315 PNNFTYSGILNACSSILALDLGK-QIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAV 373
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
F + NV++WT+++ G+ + E+ +F +M+ G+ NS TL+ + ACG
Sbjct: 374 RAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIK 433
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+ ++HG + + D D+++GN+++ Y LG +D+A V SMM RD +++ SL +
Sbjct: 434 SLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLAT 493
Query: 243 GYVHNGEIEEAYRLFERMPGKD-----------------------------------FVS 267
G E A + M D S
Sbjct: 494 RINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGS 553
Query: 268 WTTMITG----FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
W ++ G + G + + F + E D V+W +I G +N A F +M
Sbjct: 554 WISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMR 613
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
V P+Q+T VL A + H +V M ++ S++
Sbjct: 614 LAGVEPDQITCLLVLYACS-----------HGGLVDMGLDYFQSMR-------------- 648
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+ + I +D Y ++ + G EEA+N+ M P+ + + ++L AC
Sbjct: 649 EKHGIRPQLDH-----YVCLVDLLGRAGRLEEAMNVIETMP---FKPDALIYKTLLGACK 700
Query: 444 HVGLVEEG 451
G + G
Sbjct: 701 LHGNIPLG 708
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
++ G IH+ ++KM + D+ + N+L+SLY KC V +A ++F + R++ S+ ++S
Sbjct: 30 SVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMS 89
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
+ + G EEAL LF M G PN+ T + L +C+ + G F+++ T +
Sbjct: 90 AYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHG-TRFQALVTKSGFD 148
Query: 466 PGPEHYACMVDILGRAGSLAEA 487
P + ++D + G EA
Sbjct: 149 SNPVLGSALIDFYSKCGCTQEA 170
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/653 (28%), Positives = 336/653 (51%), Gaps = 56/653 (8%)
Query: 3 DRTSASYNAMI-----TALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA 57
D+++ NA+I L+++ ++E + A R+ S+ ++++G V+ G EA
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDA----RDVASWNSVVSGCVQNGRTLEA 251
Query: 58 EELYVNMPARW--RDSVCSNALIS-----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
L+ M + +S S A++ G L +GR E A + + E ++ +++
Sbjct: 252 LALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGR-ELHAALLKCGSELNIQC-NALLV 309
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y K GRV A +F ++ EK+ ++W +M+ Y++ + + D F M + G +
Sbjct: 310 MYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHAC 369
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ L A G R G + H + D+ +GN+++ MY + G ++ + KVF M
Sbjct: 370 VVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMG 429
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK--------------------------- 263
RD +SW ++++ + + EA + + +
Sbjct: 430 IRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQ 489
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D + +I + G + S+ LF + +KD V+WT++I+ NN +
Sbjct: 490 VHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRL 549
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
A F EM + +++P+ + L S+L A A ++L +G Q+H +++ N + + +SL
Sbjct: 550 NGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSL 609
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V +YS CG++ A R+F +++V + +MI+ +G G++A++LF++M GL P+
Sbjct: 610 VDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDH 669
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
++FL++L AC+H LVEEG Y M + Y ++P EHYAC+VDILGR+G EA + I
Sbjct: 670 VSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIK 729
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
+M +P VW ALLGA R H N LA +AA L+ELEPD+ Y+++S++++ +GK +
Sbjct: 730 TMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNN 789
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
R + + +RK+P CSWI + + +H F +G D + I + L I++
Sbjct: 790 AKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITE 842
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 190/374 (50%), Gaps = 43/374 (11%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG---GMAFNS 168
Y + GRV +AR +F+ MP + V +W A+V Y+ + ++ +MR G A +
Sbjct: 105 YGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDG 164
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
TL + +ACG R G +VHGL + G D ++ N++I MY + G +D A +VF
Sbjct: 165 CTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEW 224
Query: 229 MSK--RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF--------------------- 265
+ + RD SWNS++SG V NG EA LF M F
Sbjct: 225 LQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLS 284
Query: 266 -----------------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
+ ++ ++ G ++ ++ +F + EKD ++W +++S +V
Sbjct: 285 LGRELHAALLKCGSELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQ 344
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
N Y EA +F EML+ +P+ + S+ SA + LN G + HA+ +K + +D+ +
Sbjct: 345 NSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQV 404
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
N+L+ +Y KCG++ + ++F ++ R+ +S+ ++++ FAQ+ EAL + +++ EG+
Sbjct: 405 GNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGI 464
Query: 429 VPNQITFLSVLSAC 442
+ + + S+L C
Sbjct: 465 MVDSMMIGSILETC 478
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/582 (22%), Positives = 258/582 (44%), Gaps = 99/582 (17%)
Query: 48 FVRRGMFYEAEELYVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAM--------- 97
+ R G +A L+ MPAR +V S NAL+ YL G EA R++ AM
Sbjct: 105 YGRCGRVDDARRLFNGMPAR---TVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSA 161
Query: 98 ---------------------------------VEKDVVAWGSMVDGYCKKGRVIEAREI 124
++K + +++ Y K G + A +
Sbjct: 162 PDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRV 221
Query: 125 FDKMPE--KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
F+ + + ++V +W ++V G ++ + LF M+ G NS T + + C
Sbjct: 222 FEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELG 281
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G ++H + + G + +I N+++ MY + G +D A +VF ++++D +SWNS++S
Sbjct: 282 LLSLGRELHAALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLS 340
Query: 243 GYVHNGEIEEAYRLFERM--------------------------PGKDFVSWT------- 269
YV N EA F M G++F ++
Sbjct: 341 CYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHT 400
Query: 270 ------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
T++ + G++E S ++F M +D ++WT I++ F + ++ EA +E+
Sbjct: 401 DLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQ 460
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
++ + + + + S+L +++ Q+H + ++ N D+ ++N L+ +Y +CG
Sbjct: 461 KEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIR-NGLLDLILENRLIDIYGECGEFD 519
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+ +F +++++IVS+ SMI+ NG A+ LF +M+ + P+ + +S+L A
Sbjct: 520 HSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIA 579
Query: 444 HVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+ + +G ++ ++ + IE GP + +VD+ GS+ AI + + +
Sbjct: 580 GLSSLTKGKQVHGFLIRRNFPIE-GPV-VSSLVDMYSGCGSMNYAIRVFERAKCKDVV-L 636
Query: 503 WGALLGAGRTHLN----LDLAKLAAQHLMELEPDSATPYVVL 540
W A++ A H + +DL K Q L PD + +L
Sbjct: 637 WTAMINATGMHGHGKQAIDLFKRMLQ--TGLTPDHVSFLALL 676
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 142/313 (45%), Gaps = 48/313 (15%)
Query: 186 EGVQVHGLVSRFGF---DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
EG QVH G D D L ++ MYGR G +D+A ++F+ M R SWN+L+
Sbjct: 75 EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134
Query: 243 GYVHNGEIEEAYRLFERM-----PG----------------------------------- 262
Y+ +G EA R++ M PG
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194
Query: 263 --KDFVSWTTMITGFSSKGNLEKSIELFNMMPE--KDDVTWTAIISGFVNNEQYEEAFRW 318
K + +I ++ G L+ ++ +F + + +D +W +++SG V N + EA
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALAL 254
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F M N T +VL A L+ G ++HA ++K E ++ N+L+ +Y+K
Sbjct: 255 FRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALLVMYAK 313
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
G V A R+F I E++ +S+NSM+S + QN EA++ F +M G P+ +S+
Sbjct: 314 YGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSL 373
Query: 439 LSACNHVGLVEEG 451
SA H+ + G
Sbjct: 374 SSALGHLSRLNNG 386
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV---KMNMESDVSIQ 369
E R + L P + VL AA +G Q+HAH V +N + D +
Sbjct: 39 EGDLRQALRQLTTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLA 98
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE--- 426
LV +Y +CG V DA R+F + R + S+N+++ + +G EA+ ++ M+
Sbjct: 99 TKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAP 158
Query: 427 GLVPNQITFLSVLSACNHVG 446
G P+ T SVL AC G
Sbjct: 159 GSAPDGCTLASVLKACGAEG 178
>gi|297843734|ref|XP_002889748.1| hypothetical protein ARALYDRAFT_471032 [Arabidopsis lyrata subsp.
lyrata]
gi|297335590|gb|EFH66007.1| hypothetical protein ARALYDRAFT_471032 [Arabidopsis lyrata subsp.
lyrata]
Length = 595
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 297/532 (55%), Gaps = 62/532 (11%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+NA I+ ++G+ EA ++F++ K V +W SMV Y +A+ +FD+MPE+N+
Sbjct: 18 ANAQITHLSRIGQIHEARKLFDSCDSKSVSSWNSMVAVYSASCMPRDAQLLFDEMPERNI 77
Query: 134 VAWTAMVDGYMK---VDCFEDGFDLFLSMRRGGMAFNSITLTILFE-ACGRFFRYREGVQ 189
++W ++ GYMK +D + FDL L N ++ T L + A F++ E +
Sbjct: 78 ISWNGLLSGYMKNGEIDEAREVFDLMLER-------NVVSWTTLVDVAESLFWKMPEKNK 130
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+ + R + I S+I + G +DEA ++F MS+R ++W ++++GY N
Sbjct: 131 MGESMMRVSY----IARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGRNNR 186
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLE-------------KSIELFNMMPEKDD 296
+++A +LF+ MP K VSWT+M+ + G +E KS E F+ M E++D
Sbjct: 187 VDDARKLFDVMPEKTEVSWTSMLMSYVQNGRIEDAEELFEAKRRDSKSKEGFDSMKERND 246
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
TW +I N EA F+ M ++ VRP TL SVLS A+ A+L+ G Q+HA
Sbjct: 247 ATWQMVIKFHERNGFELEALDLFVLMQKQGVRPTFPTLISVLSVCASLASLHHGKQVHAQ 306
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+V+ + D+ + + L+++Y KCG ++ + IF ++I+ +NS+ISG+A + LGEEA
Sbjct: 307 LVRCQFDVDLYVASVLMTMYIKCGELLKSKLIFDRFPSKDIIMWNSIISGYASHSLGEEA 366
Query: 417 LNLFRKMKDEGLV-PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
L +F +M G PN++TF++ LSAC++ G+VEEG F+SM++
Sbjct: 367 LKIFYEMPLSGSTEPNEVTFVATLSACSYAGMVEEGLKIFESMES--------------- 411
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD-SA 534
+LGRAG EA+++I+SM EP VWG+LLGA RTH LDLA+ A+ L+E+E + S
Sbjct: 412 -VLGRAGRFNEAMEMIDSMIVEPDAAVWGSLLGACRTHSQLDLAEFCAKKLIEIETENSG 470
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+P ++ +G L +RKSPGCSW +K KVH F G
Sbjct: 471 SPTF----MHLKVG------------GLMLVRKSPGCSWNEVKFKVHAFTHG 506
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 168/367 (45%), Gaps = 80/367 (21%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
++ +S+N+M+ A+ + +C +A +F MP RN +S+ +++G+++ G EA E++
Sbjct: 44 KSVSSWNSMV-AVYSASCMPRDAQLLFDEMPERNIISWNGLLSGYMKNGEIDEAREVFDL 102
Query: 64 MPAR----------------WR--------------DSVCSNALISGYLKVGRCEEAARI 93
M R W+ + ++I G K GR +EA I
Sbjct: 103 MLERNVVSWTTLVDVAESLFWKMPEKNKMGESMMRVSYIARTSMIHGLCKEGRVDEAREI 162
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED-- 151
F+ M E+ V+ W +MV GY + RV +AR++FD MPEK V+WT+M+ Y++ ED
Sbjct: 163 FDEMSERSVITWTTMVTGYGRNNRVDDARKLFDVMPEKTEVSWTSMLMSYVQNGRIEDAE 222
Query: 152 --------------GF----------------------------DLFLSMRRGGMAFNSI 169
GF DLF+ M++ G+
Sbjct: 223 ELFEAKRRDSKSKEGFDSMKERNDATWQMVIKFHERNGFELEALDLFVLMQKQGVRPTFP 282
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
TL + C G QVH + R FD D+ + + ++TMY + G + ++ +F
Sbjct: 283 TLISVLSVCASLASLHHGKQVHAQLVRCQFDVDLYVASVLMTMYIKCGELLKSKLIFDRF 342
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-----GKDFVSWTTMITGFSSKGNLEKS 284
+D + WNS+ISGY + EEA ++F MP + V++ ++ S G +E+
Sbjct: 343 PSKDIIMWNSIISGYASHSLGEEALKIFYEMPLSGSTEPNEVTFVATLSACSYAGMVEEG 402
Query: 285 IELFNMM 291
+++F M
Sbjct: 403 LKIFESM 409
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 180/571 (31%), Positives = 296/571 (51%), Gaps = 52/571 (9%)
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
A ++ D+ +++D Y K + +A IF MP +++VAW AM+ GY +
Sbjct: 152 IHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAV 211
Query: 154 DLFLSMRR--GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD--------- 202
LSM+ + N+ TL L + +G VH R +
Sbjct: 212 AHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTD 271
Query: 203 -IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++LG +++ MY + G + A +VF M R+ V+W++LI G+V + +A+ LF+ M
Sbjct: 272 GVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAML 331
Query: 262 GK----------------------------------------DFVSWTTMITGFSSKGNL 281
+ D + ++++ ++ G +
Sbjct: 332 AQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLI 391
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+++I LF+ M KD V+++A++SG+V N + EEAF F +M +V P+ T+ S++ A
Sbjct: 392 DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 451
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ A L G H V+ + S+ SI N+L+ +Y+KCG + + ++F + R+IVS+N
Sbjct: 452 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWN 511
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MI+G+ +GLG+EA LF +M + G P+ +TF+ +LSAC+H GLV EG +F M
Sbjct: 512 TMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHG 571
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y + P EHY CMVD+L R G L EA + I SM VW ALLGA R + N+DL K
Sbjct: 572 YGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKK 631
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
++ + EL P+ +V+LS++YS G+ + VR+ +K++ +KSPGCSWI + +H
Sbjct: 632 VSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLH 691
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
F+ G +S EI L I G K+ +
Sbjct: 692 AFVGGDQSHPQSPEIYRELDNILVGIKKLGY 722
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 226/485 (46%), Gaps = 72/485 (14%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP---A 66
A++ + C + +A IFATMP R+ V++ AM+ G+ GM++ A ++M
Sbjct: 164 TALLDMYVKCAC-LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMH 222
Query: 67 RWRDSVCS-----------NALISGYLKVGRCEEAA----RIFEAMVEKDVVAWGSMVDG 111
R R + + AL G C A R ++ + V+ +++D
Sbjct: 223 RLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDM 282
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT- 170
Y K G ++ AR +FD MP +N V W+A++ G++ F LF +M G+ F S T
Sbjct: 283 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 342
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ AC R G Q+H L+++ G D+ GNS+++MY + G +D+A +F M+
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------PGKDFVS------- 267
+D VS+++L+SGYV NG EEA+ +F++M P ++
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 462
Query: 268 --WTTMITGFSSK--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
+ +I G +S+ G ++ S ++FNMMP +D V+W +I+G+ +
Sbjct: 463 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ-----IHAHVVKMNMESDV 366
+EA F+EM P+ +T +LSA + + + +G H + + ME +
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 582
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNI----DERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+V L S+ G + +AY ++ D R V+ + LG++ + ++
Sbjct: 583 ----CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQE 638
Query: 423 MKDEG 427
+ EG
Sbjct: 639 LGPEG 643
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 184/392 (46%), Gaps = 58/392 (14%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD--CFEDGFDLFLSMRRGGMAFNSITLTI 173
G + A +FD++P +V + ++ Y DG L+ M R +A N+ T
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+AC + G +H G D+ + +++ MY + + +A +F+ M RD
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM--------------------------------- 260
V+WN++++GY H+G A M
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 261 ----------PGKDFVSWTT--------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
P ++ S T ++ ++ G+L + +F+ MP +++VTW+A+
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKD---VRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
I GFV + +AF F ML + + P +++S L A A+ L G Q+HA + K
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAK 368
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ +D++ NSL+S+Y+K G + A +F + ++ VSY++++SG+ QNG EEA +
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
F+KM+ + P+ T +S++ AC+H+ ++ G
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHG 460
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA--FRWFIEMLRKDVRPNQLTL 334
+ G+L ++ LF+ +P D T+ +I + ++ A + MLR V PN T
Sbjct: 69 ASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTF 128
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
L A +A A + G IH H + +++D+ + +L+ +Y KC + DA IF +
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 395 RNIVSYNSMISGFAQNGLGEEALN--LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
R++V++N+M++G+A +G+ A+ L +M+ L PN T +++L G + +G
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 180/571 (31%), Positives = 296/571 (51%), Gaps = 52/571 (9%)
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
A ++ D+ +++D Y K + +A IF MP +++VAW AM+ GY +
Sbjct: 37 IHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAV 96
Query: 154 DLFLSMRR--GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD--------- 202
LSM+ + N+ TL L + +G VH R +
Sbjct: 97 AHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTD 156
Query: 203 -IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++LG +++ MY + G + A +VF M R+ V+W++LI G+V + +A+ LF+ M
Sbjct: 157 GVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAML 216
Query: 262 GK----------------------------------------DFVSWTTMITGFSSKGNL 281
+ D + ++++ ++ G +
Sbjct: 217 AQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLI 276
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+++I LF+ M KD V+++A++SG+V N + EEAF F +M +V P+ T+ S++ A
Sbjct: 277 DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPAC 336
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ A L G H V+ + S+ SI N+L+ +Y+KCG + + ++F + R+IVS+N
Sbjct: 337 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWN 396
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MI+G+ +GLG+EA LF +M + G P+ +TF+ +LSAC+H GLV EG +F M
Sbjct: 397 TMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHG 456
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y + P EHY CMVD+L R G L EA + I SM VW ALLGA R + N+DL K
Sbjct: 457 YGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKK 516
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
++ + EL P+ +V+LS++YS G+ + VR+ +K++ +KSPGCSWI + +H
Sbjct: 517 VSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLH 576
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
F+ G +S EI L I G K+ +
Sbjct: 577 AFVGGDQSHPQSPEIYRELDNILVGIKKLGY 607
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 220/470 (46%), Gaps = 71/470 (15%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA---RWRDSVCS------- 74
+A IFATMP R+ V++ AM+ G+ GM++ A ++M R R + +
Sbjct: 63 DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPL 122
Query: 75 ----NALISGYLKVGRCEEAA----RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
AL G C A R ++ + V+ +++D Y K G ++ AR +FD
Sbjct: 123 LAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 182
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT-LTILFEACGRFFRYR 185
MP +N V W+A++ G++ F LF +M G+ F S T + AC R
Sbjct: 183 AMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLR 242
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G Q+H L+++ G D+ GNS+++MY + G +D+A +F M+ +D VS+++L+SGYV
Sbjct: 243 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 302
Query: 246 HNGEIEEAYRLFERM----------------PGKDFVS---------WTTMITGFSSK-- 278
NG EEA+ +F++M P ++ + +I G +S+
Sbjct: 303 QNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETS 362
Query: 279 ------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
G ++ S ++FNMMP +D V+W +I+G+ + +EA F+EM
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQ-----IHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
P+ +T +LSA + + + +G H + + ME + +V L S+ G
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI----CMVDLLSRGGF 478
Query: 382 VVDAYRIFTNI----DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ +AY ++ D R V+ + LG++ + +++ EG
Sbjct: 479 LDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEG 528
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 165/345 (47%), Gaps = 52/345 (15%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M R +A N+ T +AC + G +H G D+ + +++ MY +
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------------ 260
+ +A +F+ M RD V+WN++++GY H+G A M
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 261 -------------------------PGKDFVSWTT--------MITGFSSKGNLEKSIEL 287
P ++ S T ++ ++ G+L + +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR-PNQLTLSSVLSASAATAT 346
F+ MP +++VTW+A+I GFV + +AF F ML + + + +++S L A A+
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L G Q+HA + K + +D++ NSL+S+Y+K G + A +F + ++ VSY++++SG
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ QNG EEA +F+KM+ + P+ T +S++ AC+H+ ++ G
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 345
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 162/325 (49%), Gaps = 19/325 (5%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISG- 80
S+ A +F MP RN V+++A+I GFV +A L+ M A+ + ++ S
Sbjct: 173 SLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASAL 232
Query: 81 -------YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+L++G + A + ++ V D+ A S++ Y K G + +A +FD+M K+
Sbjct: 233 RACASLDHLRMGE-QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDT 291
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+++A+V GY++ E+ F +F M+ + ++ T+ L AC + G HG
Sbjct: 292 VSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGS 351
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V G + + N++I MY + G +D + +VF+MM RD VSWN++I+GY +G +EA
Sbjct: 352 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 411
Query: 254 YRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIIS 304
LF M F V++ +++ S G + + F++M +T + ++
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVD 471
Query: 305 GFVNNEQYEEAFRWFIEM-LRKDVR 328
+EA+ + M LR DVR
Sbjct: 472 LLSRGGFLDEAYEFIQSMPLRADVR 496
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 287/535 (53%), Gaps = 42/535 (7%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + AR++FD +P + W A++ GY + + F+D ++ +M+ ++ +S T L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS--MMSKRD 233
+AC + G VH V R GFD D+ + N +I +Y + + A VF + +R
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLE--KSIE- 286
VSW +++S Y NGE EA +F +M D+V+ +++ F+ +L+ +SI
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 287 --------------------------------LFNMMPEKDDVTWTAIISGFVNNEQYEE 314
LF+ M + + W A+ISG+ N E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F EM+ KDVRP+ ++++S +SA A +L Q ++ +V + + DV I ++L+
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+++KCG+V A +F +R++V +++MI G+ +G EA++L+R M+ G+ PN +T
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
FL +L ACNH G+V EG+ +F M + I P +HYAC++D+LGRAG L +A ++I M
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
+P VWGALL A + H +++L + AAQ L ++P + YV LS+LY+
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
VR++ K K + K GCSW+ ++ ++ F G KS +EIE ++ I KE
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 170/367 (46%), Gaps = 57/367 (15%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + G + L +I G + A +VF + + WN++I GY N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 249 EIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKS----IELFNM---------- 290
++A ++ M D ++ ++ S +L+ ++F +
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 291 -----------------------MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+PE+ V+WTAI+S + N + EA F +M + DV
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ + L SVL+A L QG IHA VVKM +E + + SL ++Y+KCG V A
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + N++ +N+MISG+A+NG EA+++F +M ++ + P+ I+ S +SAC VG
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHY-------ACMVDILGRAGSLAEAIDLINSMTFEPPP 500
+E+ +++Y G Y + ++D+ + GS+ E L+ T +
Sbjct: 339 LEQA-------RSMYEY-VGRSDYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDV 389
Query: 501 GVWGALL 507
VW A++
Sbjct: 390 VVWSAMI 396
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 188/429 (43%), Gaps = 52/429 (12%)
Query: 12 MITALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-AR 67
+IT LI+ + S I A ++F +P + A+I G+ R F +A +Y NM AR
Sbjct: 55 LITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 68 WR-DSVCSNALISG-----YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
DS L+ +L++GR A++F + DV ++ Y K R+ A
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVH-AQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173
Query: 122 REIFD--KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
R +F+ +PE+ +V+WTA+V Y + + ++F MR+ + + + L + A
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT 233
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
++G +H V + G + + L S+ TMY + G + A +F M + + WN+
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK------------ 283
+ISGY NG EA +F M KD +S T+ I+ + G+LE+
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 284 -------------------SIE----LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
S+E +F+ ++D V W+A+I G+ + + EA +
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M R V PN +T +L A + + +G + + ++ L + G
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAG 473
Query: 381 NVVDAYRIF 389
++ AY +
Sbjct: 474 HLDQAYEVI 482
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 142/276 (51%), Gaps = 9/276 (3%)
Query: 237 WNSLISGYVHNGEIEEAY-RLFERMPGKDFVSW--TTMITGFSSKGNLEKSIELFNMMPE 293
+ SLI H ++++ + RL + G F + T +I SS G++ + ++F+ +P
Sbjct: 24 YASLIDSATHKAQLKQIHARLL--VLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR 81
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
W AII G+ N +++A + M V P+ T +L A + + L G +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN--IDERNIVSYNSMISGFAQNG 411
HA V ++ ++DV +QN L++LY+KC + A +F + ER IVS+ +++S +AQNG
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
EAL +F +M+ + P+ + +SVL+A + +++G S+ + +E P+
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM-GLEIEPDLL 260
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+ + + G +A A L + M P +W A++
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 43/264 (16%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMRN----AVSYAAMITGFVRRGMFYEAEELYVNM 64
+NAMI+ N + EA ++F M ++ +S + I+ + G +A +Y +
Sbjct: 291 WNAMISGYAKNGYA-REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 65 P-ARWRDSV-CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
+ +RD V S+ALI + K G E A +F+ +++DVV W +M+ GY GR EA
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA- 408
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
L+ +M RGG+ N +T L AC
Sbjct: 409 ------------------------------ISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLI 241
REG ++ + +I + GR G +D+A +V M + V+ W +L+
Sbjct: 439 MVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 242 SGYVHNGEIE----EAYRLFERMP 261
S + +E A +LF P
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDP 522
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 268/467 (57%), Gaps = 4/467 (0%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + A ++F ++ E ++ W M+ G + L+ M G+ + T + L
Sbjct: 61 GAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLL 120
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+ C R + G VHG V ++GF+ + + N++I + G + A +F + +R V
Sbjct: 121 KGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVV 180
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
SW++L +GY GE+ A ++F+ MP KD VSW MITG+ G +E + LF+ PEKD
Sbjct: 181 SWSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKD 240
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
VTW +I+G+V + +A F EM P+++T+ S+LSA A L G ++H
Sbjct: 241 VVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHC 300
Query: 356 HVVKMNMESDVSI--QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
+ +M D+S+ N+LV +Y+KCG++ A ++F + E+++ ++NS+I G A +G
Sbjct: 301 SISEMT-RGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHA 359
Query: 414 EEALNLFRKMKD-EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
EE++ LF +M+ + + PN+ITF+ V+ AC+H G VEEG YFK M+ Y+IEP H+
Sbjct: 360 EESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHG 419
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
CMVD+LGRAG L+EA +LI M EP +W LLGA R H N++L +LA + L++L D
Sbjct: 420 CMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRD 479
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
+ YV+LS++Y+ G+ VR +RK G S I D+
Sbjct: 480 ESGDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIEADDR 526
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 166/343 (48%), Gaps = 27/343 (7%)
Query: 39 VSYAAMITGFVRRGMFY---------EAEELYVNMPARWRDSVCS-NALISGYLKVGRCE 88
+ Y + FVR + Y A ++ ++P R SV S +AL +GY + G
Sbjct: 140 LKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPER---SVVSWSALTAGYARRGELG 196
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
A +IF+ M KD+V+W M+ GY K G + AR +FD+ PEK+VV W M+ GY+
Sbjct: 197 VARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGE 256
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF-DYDIILGN 207
++F MR G + +T+ L AC + G ++H +S D ++LGN
Sbjct: 257 QRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGN 316
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----- 262
+++ MY + G ++ A +VF M ++D +WNS+I G +G EE+ +LF M
Sbjct: 317 ALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIK 376
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN-----EQYEEAFR 317
+ +++ +I S GN+E+ F +M E+ D+ I G + + EAF
Sbjct: 377 PNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFE 436
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+M ++ PN + ++L A + G + ++K+
Sbjct: 437 LIAKM---EIEPNAIIWRTLLGACRVHGNVELGRLANERLLKL 476
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 131/303 (43%), Gaps = 46/303 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+ +R+ S++A+ TA + A +IF MP+++ VS+ MITG+V+ G A L
Sbjct: 174 LPERSVVSWSAL-TAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTL 232
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMV---------------------- 98
+ P +D V N +I+GY+ G +A +FE M
Sbjct: 233 FDEAPE--KDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLG 290
Query: 99 ------------------EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
+ V+ ++VD Y K G + A ++F KM EK+V W +++
Sbjct: 291 DLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVI 350
Query: 141 DGYMKVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLV-SRFG 198
G E+ LF M+ + N IT + AC EG + L+ R+
Sbjct: 351 GGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYD 410
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYRLF 257
+ ++I ++ + GR G + EA ++ + M + +A+ W +L+ +G +E
Sbjct: 411 IEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLAN 470
Query: 258 ERM 260
ER+
Sbjct: 471 ERL 473
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/511 (34%), Positives = 275/511 (53%), Gaps = 33/511 (6%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV + V + G ++ AR +FD+ P ++VV+W ++ GY++ + +LF +
Sbjct: 155 DVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLV 214
Query: 161 RGGMAF--NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
G A + +T+ C + G ++H V G + L N+++ MY
Sbjct: 215 EDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMY----- 269
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
V G +E A +FER+ K VSWTTMI G +
Sbjct: 270 --------------------------VKCGSLELAKSVFERIDNKTVVSWTTMIVGHARL 303
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G +E + LF+ MPE+D W A+++G+V N+Q +EA F EM V PN++T+ ++L
Sbjct: 304 GMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLL 363
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA + L G +H ++ + + V++ SLV +Y+KCGN+ A IF I ++N +
Sbjct: 364 SACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNAL 423
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++ +MI G A +G +EA+ F++M D GL P++ITF+ VLSAC H GLV+EG +F M
Sbjct: 424 TWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLM 483
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
Y++E +HY+CM+D+LGRAG L EA L+N+M +P VWGAL A R H N+ L
Sbjct: 484 HEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITL 543
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+ AA L+EL+P + YV+L+++Y+ ++ ++VR+ + + K PGCS I L
Sbjct: 544 GEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNG 603
Query: 579 KVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
VH F+ KS LD I L I+ K
Sbjct: 604 VVHEFIVKDKSHLDTIAIYDCLHGITLQMKH 634
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 154/316 (48%), Gaps = 43/316 (13%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY-------------------- 61
S+ A +F P R+ VS+ +I G+VR G+ EA EL+
Sbjct: 171 SMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGA 230
Query: 62 ---------VNMPARWRDSV------CS----NALISGYLKVGRCEEAARIFEAMVEKDV 102
+ + R + V C+ NA++ Y+K G E A +FE + K V
Sbjct: 231 VSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTV 290
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
V+W +M+ G+ + G + +AR +FD+MPE++V W A++ GY++ ++ LF M+
Sbjct: 291 VSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQES 350
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
+ N IT+ L AC + G+ VH + R + LG S++ MY + G + +A
Sbjct: 351 KVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKA 410
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSK 278
+F + ++A++W ++I G ++G +EA F+RM D +++ +++
Sbjct: 411 ICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHA 470
Query: 279 GNLEKSIELFNMMPEK 294
G +++ + F++M EK
Sbjct: 471 GLVKEGRQFFSLMHEK 486
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 134/315 (42%), Gaps = 49/315 (15%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ A +F + + VS+ MI G R GM +A L+ MP RD NAL++GY
Sbjct: 274 SLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPE--RDVFPWNALMAGY 331
Query: 82 LKVGRCEEAARIFEAMVEKDV--------------------------------------V 103
++ + +EA +F M E V V
Sbjct: 332 VQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSV 391
Query: 104 AWG-SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
A G S+VD Y K G + +A IF ++P+KN + WTAM+ G ++ + F M
Sbjct: 392 ALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDL 451
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLV-SRFGFDYDIILGNSIITMYGRLGFMDE 221
G+ + IT + AC +EG Q L+ ++ + + + +I + GR G +DE
Sbjct: 452 GLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDE 511
Query: 222 ANKVFSMMS-KRDAVSWNSLISGYVHNGEI----EEAYRLFERMPGKDFVSWTTMITGFS 276
A ++ + M DAV W +L +G I + A +L E P + ++
Sbjct: 512 AEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGI--YVLLANMY 569
Query: 277 SKGNLEKSIELFNMM 291
++ N+ K + +M
Sbjct: 570 AEANMRKKADKVRVM 584
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
RP+ LT +L A A G+ + HV K+ +DV + N+ V +S G++V A R
Sbjct: 118 RPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARR 177
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG--LVPNQITFLSVLSACNHV 445
+F R++VS+N++I G+ ++GL EAL LF ++ ++G + P+++T + +S C +
Sbjct: 178 LFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQM 237
Query: 446 GLVEEG 451
G +E G
Sbjct: 238 GDLELG 243
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 321/602 (53%), Gaps = 69/602 (11%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+A + F MP+RN VS+ +I+GFV++ A + M R +N I+ L
Sbjct: 301 QAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEM--RKVGEKINNYTITSVLTA 358
Query: 85 GRCEEAARIFEAMVEKDVVAW-------------GSMVDGYCKKGRVIEAREIFDKMPE- 130
C E I EA+ + +W ++++ Y K G V + +F +M
Sbjct: 359 --CTEPVMIKEAV---QLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMEST 413
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM---AFNSITLTILFEACGRFFRYREG 187
KN+ W M+ + + +LF M + G+ F S ++ + ++ G
Sbjct: 414 KNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL------G 467
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+H + + G DI +G+S+ TMY + G ++E+ VF M +D VSW S+I+G+ +
Sbjct: 468 RLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEH 527
Query: 248 GEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIEL---------------- 287
E+A +LF M + D ++ T +T S+ +LEK E+
Sbjct: 528 DHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVG 587
Query: 288 -------------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
F+M+P+KD + ++++SG+ N E+A F E+ D+
Sbjct: 588 GALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLW 647
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ T+SSV+ A A +L+ G+Q+HA V KM + ++VS+ +SLV++YSKCG++ + +++
Sbjct: 648 IDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKV 707
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F I++ +++S+ +MI +AQ+G G EAL ++ M+ EG P+ +TF+ VLSAC+H G+V
Sbjct: 708 FEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMV 767
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
EEG+ + SM Y IEPG HYACMVD+LGR+G L EA IN+M EP +WG LL
Sbjct: 768 EEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLA 827
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A + H +++L +LAA+ ++ELEP A YV LS++ + +G D ++R + ++K
Sbjct: 828 ACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKE 887
Query: 569 PG 570
PG
Sbjct: 888 PG 889
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/568 (27%), Positives = 286/568 (50%), Gaps = 51/568 (8%)
Query: 21 CSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALI 78
CS +A +F + N V + A+I+G V+ + A +L+ M R+ +S ++++
Sbjct: 196 CSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSIL 255
Query: 79 SGY-----LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+ L+ GR + + + +DV +++D Y K + +A + F +MP +NV
Sbjct: 256 TACAALEELEFGRGVQG-WVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNV 314
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+WT ++ G+++ D F F MR+ G N+ T+T + AC +E VQ+H
Sbjct: 315 VSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSW 374
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEE 252
+ + GF D + +++I MY ++G +D + +VF M S ++ W +IS + +G
Sbjct: 375 IFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGR 434
Query: 253 AYRLFERM------PGK------------------------------DFVSWTTMITGFS 276
A LF+RM P K D +++ T +S
Sbjct: 435 AVELFQRMLQEGLRPDKFCSSSVLSIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYS 494
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G+LE+S +F MP+KD+V+W ++I+GF ++ E+A + F EML +++RP+Q+TL++
Sbjct: 495 KCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTA 554
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
L+A +A +L +G ++H + ++ + +V + +LV++YSKCG +V A R+F + +++
Sbjct: 555 ALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKD 614
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
S +S++SG+AQNG E+AL LF +++ L + T SV+ A + ++ G
Sbjct: 615 QFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIG-TQLH 673
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
+ T + + +V + + GS+ E + + +P W A++ + H
Sbjct: 674 ACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIE-KPDLISWTAMIVSYAQH-GK 731
Query: 517 DLAKLAAQHLMELE---PDSATPYVVLS 541
L LM E PDS T VLS
Sbjct: 732 GAEALKVYDLMRKEGTKPDSVTFVGVLS 759
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 155/382 (40%), Gaps = 69/382 (18%)
Query: 77 LISGYLKVGRCE-------EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
S Y K GRC A + A+++ + S++ YCK ++ A +FDK P
Sbjct: 49 FFSDYTKSGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTP 108
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
N I+ IL C + F + + +
Sbjct: 109 HP-----------------------------------NVISWNILISGCNQNFSFEDSWR 133
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+ GFD + S+++ LG V+S+ K S +GYV G
Sbjct: 134 NFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFS-----NGYVRAG- 187
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
MI F+ + E ++ +F + ++ V W AIISG V N
Sbjct: 188 ---------------------MIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKN 226
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
+ A F +M + PN T SS+L+A AA L G + V+K DV +
Sbjct: 227 RENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVG 286
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+++ LY+KC ++ A + F + RN+VS+ ++ISGF Q A + F++M+ G
Sbjct: 287 TAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEK 346
Query: 430 PNQITFLSVLSACNHVGLVEEG 451
N T SVL+AC +++E
Sbjct: 347 INNYTITSVLTACTEPVMIKEA 368
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 273/506 (53%), Gaps = 34/506 (6%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+++ Y + G ++A+++F+ + ++V+WT ++ Y+ F +F + G+ +
Sbjct: 294 LLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPD 353
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
S + ACG G VHG+V RF D I+GN++I MY R
Sbjct: 354 SFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSR------------ 401
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
+G IE A +F+ M KD SWT+++ GF ++E + +
Sbjct: 402 -------------------SGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRI 442
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR--PNQLTLSSVLSASAATA 345
F+ MP ++ V+WTA+I+G+V E F EM R + + P +T+ +VLS A
Sbjct: 443 FDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEM-RAEGKDWPTVITIVAVLSGCADIG 501
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+ GS +H +V K N++ DV++ N+L+ +Y+K G +V A +IF + +R++ S+ +MIS
Sbjct: 502 AFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMIS 561
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G A +G G AL F M G PN++T LSVLSAC+H GLV EG F+ M + I+
Sbjct: 562 GLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIK 621
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
P +HY CMVD+LGRAG L EA +LI M +P +W +LL A H NL LA++A +
Sbjct: 622 PKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKM 681
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
++ELEPD Y++L ++Y + D + R + +R++K PGCSW+ + VH FLA
Sbjct: 682 IIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLA 741
Query: 586 GRKSCLDLKEIEVTLQTISKGTKEFD 611
++ L+ I++ K+ D
Sbjct: 742 EDAVHCIRADVYTVLEAITEQMKDLD 767
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 168/365 (46%), Gaps = 16/365 (4%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D + NALI Y + G E A +F+ M KDV +W S+++G+ K + AR IFD+MP
Sbjct: 388 DPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMP 447
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS-ITLTILFEACGRFFRYREGV 188
+N V+WTAM+ GY++ + G +LF MR G + + IT+ + C + G
Sbjct: 448 MRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGS 507
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
VHG V++ D D+ + N+++ MY + G + A K+F M KRD SW ++ISG +G
Sbjct: 508 SVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHG 567
Query: 249 EIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVTWT 300
+ A F M + V+ ++++ S G + + LF M + K +
Sbjct: 568 KGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHY 627
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+ + + IE + ++P+ + S+LSA L ++++
Sbjct: 628 GCMVDLLGRAGLLREAKELIEHM--PIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIEL 685
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM----ISGFAQNGLGEEA 416
+ D + L ++Y DA + + +R + ++G L E+A
Sbjct: 686 EPDDD-GVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLAEDA 744
Query: 417 LNLFR 421
++ R
Sbjct: 745 VHCIR 749
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 28/271 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + +S+ +++ I N I A IF MPMRN+VS+ AMITG+V+ + EL
Sbjct: 415 MEIKDVSSWTSLLNGFIKCN-DIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLEL 473
Query: 61 YVNMPAR---WRDSVCSNALISGYLKVGRCEEAARIF----EAMVEKDVVAWGSMVDGYC 113
+ M A W + A++SG +G + + + + ++ DV +++D Y
Sbjct: 474 FQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYA 533
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
K G ++ A +IF +MP+++V +WT M+ G + F M + G N +TL
Sbjct: 534 KSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLS 593
Query: 174 LFEACGRFFRYREG-------VQVHGL---VSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+ AC EG VQ HG+ + +G D++ GR G + EA
Sbjct: 594 VLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLL---------GRAGLLREAK 644
Query: 224 KVFSMMS-KRDAVSWNSLISGYVHNGEIEEA 253
++ M K D+V W SL+S + +G + A
Sbjct: 645 ELIEHMPIKPDSVIWRSLLSACLVHGNLALA 675
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 257/451 (56%), Gaps = 32/451 (7%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD---------------- 233
VH V + G D +GN++I Y + G +A KVF M +RD
Sbjct: 457 VHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGE 516
Query: 234 ---------------AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
VSWN+++ GY GE+E A+ LF+RMP ++ VSW+TM++G+ K
Sbjct: 517 LAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKK 576
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G+LE + +F+ MP K+ VTWT ++S +EA + F +M V + + S+L
Sbjct: 577 GDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSIL 636
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF-TNIDERNI 397
+A A + +L+ G +IH +V K N+ + N+L+ ++ KCG V A +F T +++
Sbjct: 637 AACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDS 696
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
VS+NS+I GFA +G G++AL LF +MK +G P+ +T ++VLSAC H+G V+EG +F +
Sbjct: 697 VSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSN 756
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
M+ Y I P EHY CM+D+LGR G + EA+DLI SM +EP +WG+LL A R H N++
Sbjct: 757 MERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVE 816
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
A++A L +L+P +A Y VLS++Y+ G+ D + RM+ K +K+ G SW+ L
Sbjct: 817 YAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELN 876
Query: 578 DKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+ H F G + D +I + +S K
Sbjct: 877 ETFHEFTVGDRKHQDSDQISEMVDRLSSHVK 907
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 153/299 (51%), Gaps = 21/299 (7%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA+I A + N +A ++F MP R+ VS+ + VR G +L+ MP +
Sbjct: 474 NALIDAY-SKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEK-- 530
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+V N ++ GY K G E A +F+ M E++VV+W +MV GYCKKG + AR IFDKMP
Sbjct: 531 DTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMP 590
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
KN+V WT MV + ++ LF M+ + + + + AC G +
Sbjct: 591 SKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKR 650
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNG 248
+H V + + N++I M+ + G ++ A+ VF + ++D+VSWNS+I G+ +G
Sbjct: 651 IHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHG 710
Query: 249 EIEEAYRLFERMPGKDF-VSWTTMIT--------GFSSKG-----NLEKSIELFNMMPE 293
++A LF +M + F TMI GF +G N+E+ + +MP+
Sbjct: 711 HGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERD---YGIMPQ 766
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 207/477 (43%), Gaps = 71/477 (14%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMF-YEAEELYVNMPARWRDSVCSNALISGYLK 83
+A F+ MP R++ +Y+ +I G+ A +V D+ NALI Y K
Sbjct: 423 DALAAFSAMPRRDSFTYSFLIKALSAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSK 482
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
G +A ++F+ M E+DVV+W + + ++G + R++FD+MPEK+ V+W ++DGY
Sbjct: 483 NGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGY 542
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
K E F+LF M + ++
Sbjct: 543 TKAGEVEAAFELFQRMP---------------------------------------ERNV 563
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+ +++++ Y + G ++ A +F M ++ V+W ++S G ++EA +LF +M
Sbjct: 564 VSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEA 623
Query: 264 ----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS---------GFVNNE 310
D + +++ + G+L + + +++ T + + G VN
Sbjct: 624 SVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRA 683
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
Y + E ++KD ++ +S++ A ++ ++ A + + D
Sbjct: 684 DYV----FDTETVQKD----SVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMI 735
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDE-----RNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+++S + G V + R F+N++ I Y MI + GL +EA++L + M
Sbjct: 736 NVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPW 795
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
E PN++ + S+LSAC VE I + L G +YA + +I AG
Sbjct: 796 E---PNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAG--NYAVLSNIYAEAG 847
>gi|222635245|gb|EEE65377.1| hypothetical protein OsJ_20684 [Oryza sativa Japonica Group]
Length = 769
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/526 (34%), Positives = 292/526 (55%), Gaps = 41/526 (7%)
Query: 97 MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM-----PEKNVVAWTAMVDGYMKVDCFED 151
M KD + +MV G+ K G + EA E+ K +K V A+ ++ Y + F D
Sbjct: 1 MPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSD 60
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
LF + +G +Y+ H ++ R GF+ +++ NS++
Sbjct: 61 AKRLFDMIPKG--------------------QYQ-----HNMLKRKGFERNVVSWNSMMI 95
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTM 271
Y + G + A +F+ M +D VSWN++ISGY +++E+ +LF MP D VSW +
Sbjct: 96 CYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLI 155
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
I GF KG E + F+ MPE+ ++W +ISG+ N Y + + F +ML P++
Sbjct: 156 IQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDR 215
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T SSVL+A A+ L G+QIH +V+ + D +I N+L+++YS+CG + DA IF
Sbjct: 216 HTFSSVLAACASIPMLGLGAQIH-QLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQ 274
Query: 392 ID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ ++++VS+N++I + +G +AL LF++M+ ++P ITF+S+LSAC + GLV E
Sbjct: 275 MHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSE 334
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G + F +M Y I EHYA +V+++GR G L +A+++INSM P VWGA LGA
Sbjct: 335 GRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVINSMPMAPDRSVWGAFLGAC 394
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
N LA++AA+ L + PDS+ PYV++ +L++ GK VR + + + I K PG
Sbjct: 395 TAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPG 454
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHD 616
SWI L+ K+H+F++G + +EI L+ DW H+
Sbjct: 455 YSWIDLEGKMHVFISGDTWHPNAQEIFSVLE---------DWQWHN 491
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 122/226 (53%), Gaps = 4/226 (1%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFE 95
RN VS+ +M+ +++ G A L+ MP + D V N +ISGY + +E+ ++F
Sbjct: 85 RNVVSWNSMMICYIKAGDVCSARALFNEMPDK--DLVSWNTMISGYTQASDMKESEKLFW 142
Query: 96 AMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
M + D V+W ++ G+ +KG AR FD+MPE+ ++W M+ GY K + L
Sbjct: 143 EMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKL 202
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
F M G + T + + AC G Q+H LV + F D + N++ITMY R
Sbjct: 203 FSKMLEVGEIPDRHTFSSVLAACASIPMLGLGAQIHQLVEK-SFVPDTAISNALITMYSR 261
Query: 216 LGFMDEANKVFSMM-SKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
G +++A +F M +K+D VSWN+LI Y H+G +A +LF+ M
Sbjct: 262 CGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEM 307
>gi|357482055|ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago truncatula]
gi|355512648|gb|AES94271.1| hypothetical protein MTR_5g012660 [Medicago truncatula]
Length = 519
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 268/470 (57%), Gaps = 2/470 (0%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ Y K A +F ++P+ NVV+W ++ GY+ F+ LF + R +
Sbjct: 46 TLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICA 105
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
++ + T AC + + G +H + G D + ++ N +I MYG+ G ++ A ++F
Sbjct: 106 DAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRIF 165
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIE 286
S ++ +D +SWNS+I+ +NG I ++ + MP D VS+ +I G + G +E ++
Sbjct: 166 SDIADKDVISWNSVIAACANNGNIGLGFKFLQLMPNPDVVSYNGLINGIAQAGKIEDAVR 225
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
+ + MP + +W ++I+GFVN + EA F +M K+++ ++ T S +L+ A+ +
Sbjct: 226 ILSTMPCPNSSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIASLSA 285
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L G IH +K ++S + + +SL+ +YSKCG V DA IF + RN+VS+N+MI G
Sbjct: 286 LTWGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFNVLSNRNLVSWNAMIYG 345
Query: 407 FAQNGLGEEALNLFRKMKDE-GLVPNQITFLSVLSACNHVGL-VEEGFIYFKSMKTLYNI 464
+A+NG +A++LF +K E P+ ITFL+V+SAC+H + E G YF +M Y I
Sbjct: 346 YARNGDSAQAISLFELLKMERDTKPDGITFLNVISACSHSQIPFEMGIQYFDAMINEYGI 405
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
P +H M+ ++G+ G L+ A +I+ + FE VW +LL A T +L +A++AA
Sbjct: 406 APSIKHCCSMIRLMGQKGELSRAQKMIHELGFESCGVVWRSLLAACGTQEDLHVAEIAAA 465
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
++ LE D YV+LS++Y+ G+ D N +R KR+RK G SWI
Sbjct: 466 KVIGLERDEDYVYVMLSNMYASFGRWEDVNVIRSLMSKKRVRKEAGSSWI 515
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 145/341 (42%), Gaps = 74/341 (21%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW---------------- 68
A +F +P N VS+ +I+G+V G F +A L+ +
Sbjct: 59 HAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICADAFSFTSAMVACA 118
Query: 69 ---------------------RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGS 107
++V +N LI Y K G E A RIF + +KDV++W S
Sbjct: 119 QLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRIFSDIADKDVISWNS 178
Query: 108 -------------------------------MVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+++G + G++ +A I MP N +W
Sbjct: 179 VIAACANNGNIGLGFKFLQLMPNPDVVSYNGLINGIAQAGKIEDAVRILSTMPCPNSSSW 238
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+++ G++ + ++F M + + T +I+ G+ +H +
Sbjct: 239 NSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIASLSALTWGMLIHCCTIK 298
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
+G D I++G+S+I MY + G +++A +F+++S R+ VSWN++I GY NG+ +A L
Sbjct: 299 YGLDSSIVVGSSLIDMYSKCGQVNDAESIFNVLSNRNLVSWNAMIYGYARNGDSAQAISL 358
Query: 257 F-----ERMPGKDFVSWTTMITGFS-SKGNLEKSIELFNMM 291
F ER D +++ +I+ S S+ E I+ F+ M
Sbjct: 359 FELLKMERDTKPDGITFLNVISACSHSQIPFEMGIQYFDAM 399
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 137/282 (48%), Gaps = 47/282 (16%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
TT+I + + LF +P+ + V+W +ISG+V+ Q+++A F ++ R +
Sbjct: 45 TTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQIC 104
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ + +S + A A + L GS IH+ VK+ M+++ + N L+ +Y KCG+V A RI
Sbjct: 105 ADAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRI 164
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F++I +++++S+NS+I+ A NG ++GL
Sbjct: 165 FSDIADKDVISWNSVIAACANNG--------------------------------NIGL- 191
Query: 449 EEGFIYFKSMKTLYNIEPGPE--HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
GF + + M P P+ Y +++ + +AG + +A+ ++++M P W ++
Sbjct: 192 --GFKFLQLM-------PNPDVVSYNGLINGIAQAGKIEDAVRILSTMPC-PNSSSWNSV 241
Query: 507 LGA--GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
+ R+ + L HL L+ D T ++L+ + S+
Sbjct: 242 ITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIASL 283
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 135/325 (41%), Gaps = 54/325 (16%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+AD+ S+N++I A NN +I F+ MP + VSY +I G + G +A +
Sbjct: 168 IADKDVISWNSVIAACANNG-NIGLGFKFLQLMPNPDVVSYNGLINGIAQAGKIEDAVRI 226
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV------------------ 102
MP +S N++I+G++ R EA +F M K++
Sbjct: 227 LSTMPC--PNSSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIASLS 284
Query: 103 -VAWG--------------------SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+ WG S++D Y K G+V +A IF+ + +N+V+W AM+
Sbjct: 285 ALTWGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFNVLSNRNLVSWNAMIY 344
Query: 142 GYMKVDCFEDGFDLF--LSMRRGGMAFNSITLTILFEACGRF-FRYREGVQ-VHGLVSRF 197
GY + LF L M R + IT + AC + G+Q +++ +
Sbjct: 345 GYARNGDSAQAISLFELLKMERDTKP-DGITFLNVISACSHSQIPFEMGIQYFDAMINEY 403
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGY-----VHNGEIE 251
G I S+I + G+ G + A K+ + + V W SL++ +H EI
Sbjct: 404 GIAPSIKHCCSMIRLMGQKGELSRAQKMIHELGFESCGVVWRSLLAACGTQEDLHVAEIA 463
Query: 252 EAYRL-FERMPGKDFVSWTTMITGF 275
A + ER +V + M F
Sbjct: 464 AAKVIGLERDEDYVYVMLSNMYASF 488
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 112/230 (48%), Gaps = 10/230 (4%)
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRI 388
N L L ++ + G QIH++ ++ +++ + +L+ Y K A+ +
Sbjct: 4 NALALVDLIRTATDLCFHKFGQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNL 63
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F I + N+VS+N++ISG+ G ++AL+LF K++ + + +F S + AC + L+
Sbjct: 64 FVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICADAFSFTSAMVACAQLSLL 123
Query: 449 EEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+ G I+ K++K ++ C++D+ G+ GS+ A+ + + + + W +++
Sbjct: 124 KLGSSIHSKTVK--LGMDNNTVVANCLIDMYGKCGSVERAVRIFSDIA-DKDVISWNSVI 180
Query: 508 GAGRTHLNLDLAKLAAQHLMELEPD-SATPYVVLSDLYSVIGKKRDGNRV 556
A + N+ L ++L P+ Y L + + GK D R+
Sbjct: 181 AACANNGNIGLGF----KFLQLMPNPDVVSYNGLINGIAQAGKIEDAVRI 226
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 279/497 (56%), Gaps = 31/497 (6%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+ IF + + +++ + L+ +M + G+ + +T + +AC
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G+ VH V + GF+ D + +S+I +Y + A ++F++ S RD VSWN++
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I GYV + E+ A +F+RM +D +SW TMI G++ G ++++ LF+ MPE++ V+W
Sbjct: 268 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWN 327
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKD-------------------------------VRP 329
++++GFV E+AF F EM +D V+P
Sbjct: 328 SMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKP 387
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ T+ S+LSA A L++G +H ++ +E + + +LV +Y+KCG + A ++F
Sbjct: 388 TEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVF 447
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
++ ++++++N++I+G A +G +EA LF++MK+ G+ PN ITF+++LSAC+H G+V+
Sbjct: 448 NAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVD 507
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
EG M + Y IEP EHY C++D+L RAG L EA++LI +M EP P GALLG
Sbjct: 508 EGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGG 567
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
R H N +L ++ + L+ L+P + Y++LS++Y+ K D +VR K+ I K P
Sbjct: 568 CRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVP 627
Query: 570 GCSWIILKDKVHLFLAG 586
G S I LK VH F+AG
Sbjct: 628 GVSVIELKGMVHRFVAG 644
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 158/287 (55%), Gaps = 9/287 (3%)
Query: 12 MITALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
++++LI+ N + A ++F R+ VS+ AMI G+V+ A ++ M R
Sbjct: 232 IVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCR- 290
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
D + N +I+GY VG+ +EA R+F+ M E+++V+W SM+ G+ K G V +A +F +M
Sbjct: 291 -DVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEM 349
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P ++VV+W +M+ Y + + LF MR G+ T+ L AC +G+
Sbjct: 350 PCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGL 409
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+H ++ + + I+G +++ MY + G + A +VF+ M +D ++WN++I+G +G
Sbjct: 410 HLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHG 469
Query: 249 EIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
++EA +LF+ M + +++ +++ S G +++ +L + M
Sbjct: 470 NVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCM 516
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 16/140 (11%)
Query: 329 PNQLTLS----SVLSASAATATLNQGSQIHAHVV-KMNMESDVSIQNSLVSLYSKCGNVV 383
PN LT +LS TL Q+HA ++ N +S SL +L +
Sbjct: 87 PNPLTNPPSNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLA 146
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A IF ++ YNS+I + + EAL L+ M GL P+ +T+ V+ ACN
Sbjct: 147 YAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACN 206
Query: 444 -----------HVGLVEEGF 452
H +V+ GF
Sbjct: 207 ESSVTWFGLLVHTHVVKSGF 226
>gi|359475162|ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Vitis vinifera]
Length = 670
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/632 (30%), Positives = 326/632 (51%), Gaps = 76/632 (12%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRG-------- 52
M +R ++NA+I A I ++ +A E+F + P ++ V+Y +M++G++
Sbjct: 49 MPERNVFTWNAIIWAYIKTQ-NLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALK 107
Query: 53 MFYEAEEL-------------YVNMPARWR-------------------DSVCSNALISG 80
+F E + L +N+ A+ ++LI
Sbjct: 108 LFIEMQSLNDETRIDEFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDM 167
Query: 81 YLKVGRCEEAARIFEAMVEK-DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN-VVAWTA 138
Y K G E ++F+ D+V+ +MV C++G + +F + E N VV+W
Sbjct: 168 YSKCGCFREVCQVFDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNT 227
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ GY++ C ED LF+ M + +N T+ L AC + G +VHG V ++
Sbjct: 228 LISGYVQNGCEEDALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYE 287
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
++ + + ++ +Y + G M A V++ + +A S
Sbjct: 288 LGFNPFISSGLVDVYCKCGNMKYAELVYATIGTGNAFSI--------------------- 326
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
T+MI G SS+GN+ ++ LF+ + EK + WTA+ +G+V ++Q E F
Sbjct: 327 ----------TSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFTGYVKSQQCEAVFEL 376
Query: 319 FIEM-LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
E +++ + P+ L L SVL A A A LN G QIHA+V+++ +E D + +++V +YS
Sbjct: 377 LSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGIELDEKLVSAMVDMYS 436
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
K GN+ A +IF + R+ V YN M +G+A +G +A+ F +M + G+ P+ +TF++
Sbjct: 437 KSGNIKYAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGVRPDAVTFVA 496
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
+LSAC H GLVE G YF SM T YNI P +HYACM+D+ GRA L +A+ + + E
Sbjct: 497 LLSACRHCGLVELGEKYFASM-TDYNILPEIDHYACMIDLYGRANQLEKAVAFMKRIPIE 555
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
P + GA L A R + N LA+ A + ++ +E D+ YV L+++Y+ GK + R+R
Sbjct: 556 PDAVILGAFLNACRINRNTKLAREAEEKILRIEGDNGARYVQLANVYAAEGKWVEMGRIR 615
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
K + I+K GCSW+ ++++VH+F +G S
Sbjct: 616 RKMRENEIKKFAGCSWVYVENRVHIFTSGDSS 647
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 132/511 (25%), Positives = 220/511 (43%), Gaps = 80/511 (15%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN LI Y K G EA ++F+ M E++V W +++ Y K + +ARE+FD P K++
Sbjct: 26 SNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAYIKTQNLKQARELFDSAPSKDL 85
Query: 134 VAWTAMVDGYMKVDCFE-DGFDLFLSMR--RGGMAFNSITLTILFEACGRFFRYREGVQV 190
V + +M+ GY+ D +E + LF+ M+ + +LT + + G Q+
Sbjct: 86 VTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDEFSLTRMLNLSAKLSMESYGKQL 145
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDAVSWNSLISGYVHNGE 249
H + + + +S+I MY + G E +VF + D VS N++++ GE
Sbjct: 146 HSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFDGCAGVLDLVSKNAMVAACCREGE 205
Query: 250 IEEAYRLFER-MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
+E LF R + D VSW T+I+G+ G E +++LF M E
Sbjct: 206 LEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEEDALKLFVHMEE--------------- 250
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
+VR N+ T++ +LSA A +L G ++H V+K + + I
Sbjct: 251 ----------------NEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFI 294
Query: 369 QNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD--- 425
+ LV +Y KCGN+ A ++ I N S SMI G + G EA LF + +
Sbjct: 295 SSGLVDVYCKCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSS 354
Query: 426 -----------------------------EGLVPNQITFLSVLSACNHVGLVEEG-FIYF 455
E +VP+ + +SVL AC + G I+
Sbjct: 355 IIWTALFTGYVKSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHA 414
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
++ IE + + MVD+ ++G++ A + +T V ++ AG H
Sbjct: 415 YVLRI--GIELDEKLVSAMVDMYSKSGNIKYAEKIFQRVT--NRDAVIYNIMTAGYAHHG 470
Query: 516 LDLAKLAAQHLMEL-----EPDSATPYVVLS 541
+ A Q E+ PD+ T +LS
Sbjct: 471 HE--NQAIQQFEEMLERGVRPDAVTFVALLS 499
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 67/294 (22%)
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
++G + H + G + N +I +Y + GF+ EA+K+F M +R+ +WN++I Y
Sbjct: 5 KDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAY 64
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
+ +++A LF+ P KD V++ +M +S
Sbjct: 65 IKTQNLKQARELFDSAPSKDLVTYNSM-------------------------------LS 93
Query: 305 GFVNNEQYE-EAFRWFIEM--LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
G++N + YE A + FIEM L + R ++ +L+ +L+ SA + + G Q+H+++VK
Sbjct: 94 GYINTDGYETNALKLFIEMQSLNDETRIDEFSLTRMLNLSAKLSMESYGKQLHSYMVKTA 153
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFT------------------------------- 390
+SL+ +YSKCG + ++F
Sbjct: 154 NNISGFAVSSLIDMYSKCGCFREVCQVFDGCAGVLDLVSKNAMVAACCREGELEMGVNLF 213
Query: 391 --NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+++ ++VS+N++ISG+ QNG E+AL LF M++ + N+ T +LSAC
Sbjct: 214 WRDLELNDVVSWNTLISGYVQNGCEEDALKLFVHMEENEVRWNEHTIAGLLSAC 267
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
++ G + HAH +K + S V N L+ LYSK G + +A+++F + ERN+ ++N++I
Sbjct: 3 SIKDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIW 62
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA-CNHVGLVEEGFIYFKSMKTL 461
+ + ++A LF + LV T+ S+LS N G F M++L
Sbjct: 63 AYIKTQNLKQARELFDSAPSKDLV----TYNSMLSGYINTDGYETNALKLFIEMQSL 115
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 262/476 (55%), Gaps = 31/476 (6%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR +FD++ N V W M+ Y + E+ L+ M + N+ T L +AC
Sbjct: 64 ARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSA 123
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
E Q+H + + GF ++ NS++ +Y A+S
Sbjct: 124 LSALAETHQIHVQIIKRGFGSEVYATNSLLRVY--------------------AIS---- 159
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
G I+ A+ LF+ +P +D VSW TMI G+ GN+E + ++F MPEK+ ++WT
Sbjct: 160 -------GSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWT 212
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
++I GFV ++EA +ML ++P+++TLS LSA A L QG IH ++ K
Sbjct: 213 SMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKN 272
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
++ D + +L+ +Y KCG + A +F+ ++++ + ++ ++I GFA +G G EAL+ F
Sbjct: 273 KIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWF 332
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M+ G+ P TF +VL+AC+H GLVEEG F+SM T YN++P EHY CMVD+LGR
Sbjct: 333 TQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGR 392
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA + + SM +P +WG+LL A H +L+L K + L+EL+P+ Y+ L
Sbjct: 393 AGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYIHL 452
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
+ +++ G+ + ++VR K K + PGCS I L H F AG + ++E+
Sbjct: 453 ASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEFFAGAEPHPHVREM 508
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 202/431 (46%), Gaps = 23/431 (5%)
Query: 3 DRTSAS----YNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMF 54
DR S+ +N MI A N+N EA ++ M NA ++ ++
Sbjct: 69 DRISSPNTVMWNTMIRAYSNSN-DPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSAL 127
Query: 55 YEAEELYVNMPARWRDS--VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY 112
E +++V + R S +N+L+ Y G + A +F+ + +D+V+W +M+DGY
Sbjct: 128 AETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGY 187
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
K G V A +IF MPEKNV++WT+M+ G+++ ++ L M G+ + ITL+
Sbjct: 188 IKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLS 247
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
AC +G +H + + D +LG ++I MY + G M +A VFS + K+
Sbjct: 248 CSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKK 307
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELF 288
+W ++I G+ +G+ EA F +M ++T ++T S G +E+ LF
Sbjct: 308 CVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLF 367
Query: 289 NMMPE----KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
M K + + + + + + F+E + ++PN S+L+A
Sbjct: 368 ESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESM--PIKPNAAIWGSLLNACHLH 425
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L G +I +++++ E D + L S+++ G +A ++ ++I + +++
Sbjct: 426 KHLELGKEIGKFLIELDPEHDGRYIH-LASIHAAAGEWDEASQVRSHIKNKGLLNLPG-C 483
Query: 405 SGFAQNGLGEE 415
S NG+ E
Sbjct: 484 STITLNGVAHE 494
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 145/302 (48%), Gaps = 40/302 (13%)
Query: 248 GEIEEAY-RLFERMPGKDFVSWTTMITGFSSK--GNLEKSIELFNMMPEKDDVTWTAIIS 304
GE+++ + +L ++ + ++ + ++T ++S NL + +F+ + + V W +I
Sbjct: 25 GELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIR 84
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
+ N+ EEA + +ML + N T +L A +A + L + QIH ++K S
Sbjct: 85 AYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGS 144
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS------------------- 405
+V NSL+ +Y+ G++ A+ +F + R+IVS+N+MI
Sbjct: 145 EVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMP 204
Query: 406 ------------GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-F 452
GF + G+ +EAL L ++M G+ P++IT LSAC +G +E+G +
Sbjct: 205 EKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKW 264
Query: 453 IYFKSMKTLYNIEPGPEHYAC-MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
I+ K I+P C ++D+ + G + +A+ L+ S + W A++G
Sbjct: 265 IHTYIGKNKIKIDPV---LGCALIDMYVKCGEMKKAL-LVFSKLEKKCVYTWTAIIGGFA 320
Query: 512 TH 513
H
Sbjct: 321 VH 322
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/477 (34%), Positives = 262/477 (54%), Gaps = 31/477 (6%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y R+++AR +FDKM + VAW ++DGY + ++D LF MR M +
Sbjct: 162 LIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPD 221
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
S+ L + ACG G +H V G+ D L ++I MY G MD A K
Sbjct: 222 SVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARK--- 278
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
+++ + K + T M++G++ G ++ + +
Sbjct: 279 ----------------------------IYDGLSSKHLIVSTAMLSGYAKLGMVKDARFI 310
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ M E+D V W+A+ISG+ ++Q +EA + F EML+K P+Q+T+ SV+SA + L
Sbjct: 311 FDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGAL 370
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
Q + IH +V + +S+ N+L+ +Y+KCGN+V A +F N+ +N++S++SMI+ F
Sbjct: 371 AQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAF 430
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
A +G + A+ LFR+MK+ + PN +TF+ VL AC H GLVEEG F SM + I P
Sbjct: 431 AMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPT 490
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
EHY CMVD+ RA L +AI+LI +M F P +WG+L+ A + H +L + AA+ L+
Sbjct: 491 REHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLL 550
Query: 528 ELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
ELEPD VVLS++Y+ + D +R K I K S I + ++VH+F+
Sbjct: 551 ELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFM 607
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 148/303 (48%), Gaps = 41/303 (13%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T +I ++S + + LF+ M D V W II G+ N Y++A R F +M D++
Sbjct: 160 TGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMK 219
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN------- 381
P+ + L +VLSA L+ G IH V D +Q +L+++Y+ CG
Sbjct: 220 PDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKI 279
Query: 382 ------------------------VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
V DA IF + ER++V +++MISG+A++ +EAL
Sbjct: 280 YDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEAL 339
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVG-LVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
LF +M + VP+QIT LSV+SAC+HVG L + +I+ ++ + + ++D
Sbjct: 340 KLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNN--ALID 397
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTHLNLDLAKLAAQHLME--LEPD 532
+ + G+L +A ++ +M P V W +++ A H N D A + + E +EP+
Sbjct: 398 MYAKCGNLVKAREVFENM---PRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPN 454
Query: 533 SAT 535
T
Sbjct: 455 GVT 457
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 142/277 (51%), Gaps = 6/277 (2%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
DS ALI+ Y G + A +I++ + K ++ +M+ GY K G V +AR IFD+M
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E+++V W+AM+ GY + D ++ LF M + + IT+ + AC +
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANW 375
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H V R GF + + N++I MY + G + +A +VF M +++ +SW+S+I+ + +G
Sbjct: 376 IHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGN 435
Query: 250 IEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
+ A +LF RM + V++ ++ G +E+ +LF+ M + ++ T G
Sbjct: 436 ADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 495
Query: 306 FVNNEQYEEAF-RWFIEMLRK-DVRPNQLTLSSVLSA 340
+ + F R IE++ PN + S++SA
Sbjct: 496 CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSA 532
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
++ + S+L A + + N G +IH K+ D IQ L+++Y+ C ++DA +F
Sbjct: 120 DRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLF 179
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ + V++N +I G+ QNG ++AL LF M+ + P+ + +VLSAC H G +
Sbjct: 180 DKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLS 239
Query: 450 EG 451
G
Sbjct: 240 YG 241
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 111/276 (40%), Gaps = 44/276 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAV----SYAAMITGFVRRGMFYE 56
M +R ++AMI+ ++ EA ++F M + +V + ++I+ G +
Sbjct: 314 MIERDLVCWSAMISGYAESD-QPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQ 372
Query: 57 AE--ELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
A YV+ R +NALI Y K G +A +FE M K+V++W SM++ +
Sbjct: 373 ANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAM 432
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G A ++F +M E N+ N +T +
Sbjct: 433 HGNADSAIKLFRRMKEVNIEP-------------------------------NGVTFIGV 461
Query: 175 FEACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KR 232
ACG EG ++ +++ G ++ +Y R F+ +A ++ M
Sbjct: 462 LYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAP 521
Query: 233 DAVSWNSLISGYVHNGEIE----EAYRLFERMPGKD 264
+ + W SL+S +GE E A RL E P D
Sbjct: 522 NVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHD 557
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 287/535 (53%), Gaps = 42/535 (7%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + AR++FD +P V W A++ GY + + F+D ++ M+ ++ +S T L
Sbjct: 67 GDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLL 126
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS--MMSKRD 233
+ACG + G VH V R GF+ D+ + N +I +Y + + A VF + +R
Sbjct: 127 KACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERT 186
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLE--KSIE- 286
VSW +++S Y NGE EA +F +M D V+ +++ F+ +LE +SI
Sbjct: 187 IVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHA 246
Query: 287 --------------------------------LFNMMPEKDDVTWTAIISGFVNNEQYEE 314
LF+ M + + W A+ISG+ N ++
Sbjct: 247 SVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKD 306
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F EM+ KDVRP+ ++++S +SA A +L Q + +V + + DV I ++L+
Sbjct: 307 AIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALID 366
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+++KCG+V A +F +R++V +++MI G+ +G EA++L+R M+ +G+ PN +T
Sbjct: 367 MFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVT 426
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
FL +L ACNH G+V EG+ +F M + I P +HYAC++D+LGRAG L +A ++I M
Sbjct: 427 FLGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCM 485
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
+P VWGALL A + H +++L K AAQ L ++P + YV LS+LY+
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
VR++ K K + K GCSW+ ++ ++ F G KS +EIE ++ I KE
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKE 600
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 147/304 (48%), Gaps = 41/304 (13%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + G + L +I G + A +VF + + WN++I GY N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNN 98
Query: 249 EIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKS----IELFNM---------- 290
++A ++ +M D ++ ++ +L+ ++F +
Sbjct: 99 HFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQN 158
Query: 291 -----------------------MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+PE+ V+WTAI+S + N + EA F +M + DV
Sbjct: 159 GLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDV 218
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ + L SVL+A L QG IHA V+KM +E++ + SL ++Y+KCG V A
Sbjct: 219 KPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKI 278
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + N++ +N+MISG+A+NG ++A++LF +M ++ + P+ I+ S +SAC VG
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 448 VEEG 451
+E+
Sbjct: 339 LEQA 342
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 142/277 (51%), Gaps = 11/277 (3%)
Query: 237 WNSLISGYVHNGEIEEAY-RLFERMPGKDFVSW--TTMITGFSSKGNLEKSIELFNMMPE 293
+ SLI H ++ + + RL + G F + T +I SS G++ + ++F+ +P
Sbjct: 24 YASLIDSSTHKAQLRQIHARLL--VLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPR 81
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
W AII G+ N +++A + +M V P+ T +L A + L G +
Sbjct: 82 PQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFV 141
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN--IDERNIVSYNSMISGFAQNG 411
HA V ++ E+DV +QN L++LY+KC + A +F + ER IVS+ +++S +AQNG
Sbjct: 142 HAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEH 470
EAL +F +M+ + P+ + +SVL+A + +E+G I+ MK +E P+
Sbjct: 202 EPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKM--GLETEPDL 259
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+ + + G +A A L + M P +W A++
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 182/408 (44%), Gaps = 45/408 (11%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNALISGYLKVGRCEEA 90
+P R VS+ A+++ + + G EA E++ M D V ++++ + + E+
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQG 241
Query: 91 ARIFEAMV------EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
I +++ E D++ S+ Y K G+V A+ +FDKM N++ W AM+ GY
Sbjct: 242 RSIHASVMKMGLETEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
K +D DLF M + ++I++T AC + + + VSR + D+
Sbjct: 300 KNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVF 359
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
+ +++I M+ + G ++ A VF RD V W+++I GY +G+ EA L+ M +D
Sbjct: 360 ISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAME-RD 418
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
V +DVT+ ++ ++ E + +F M
Sbjct: 419 GV--------------------------HPNDVTFLGLLIACNHSGMVREGWWFFNRMAD 452
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV-- 382
+ P Q + ++ L+Q ++ + M ++ V++ +L+S K +V
Sbjct: 453 HKINPQQQHYACIIDLLGRAGHLDQAYEV---IKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 383 --VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
A ++F+ ID N Y + + +A L + + +MK++GL
Sbjct: 510 GKYAAQQLFS-IDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGL 556
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 15/246 (6%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELY---VNMPARWRDSVCSNALISGYLKVG 85
+F M N + + AMI+G+ + G +A +L+ +N R D++ + IS +VG
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVR-PDTISITSAISACAQVG 337
Query: 86 RCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
E+A R + V + DV +++D + K G V AR +FD+ +++VV W+AM+
Sbjct: 338 SLEQA-RWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMI 396
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY + L+ +M R G+ N +T L AC REG ++ +
Sbjct: 397 VGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKIN 456
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLISGYVHNGEIE----EAYR 255
II + GR G +D+A +V M + V+ W +L+S + +E A +
Sbjct: 457 PQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQ 516
Query: 256 LFERMP 261
LF P
Sbjct: 517 LFSIDP 522
>gi|224054634|ref|XP_002298341.1| predicted protein [Populus trichocarpa]
gi|222845599|gb|EEE83146.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/425 (38%), Positives = 269/425 (63%), Gaps = 9/425 (2%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M++ G+ N + + + CG + + G +H ++ ++ + D+ + +S+I MY + G
Sbjct: 1 MQKQGLGANKFVIPSVLKCCGHVYDVQTGRILHSVILKYSIESDVYVISSLIDMYSKCGE 60
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITG 274
+++A +VF M ++D V+ N+++SGY +G +E + L ++M + ++W ++I+G
Sbjct: 61 VEKARRVFDRMVEKDLVALNAMLSGYGQHGFAKEGFALMDKMEKLGIKPNVITWNSLISG 120
Query: 275 FSSKGNLEKSIELFNMM----PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
F+ KG+ ++F +M E D ++WT++ISG V N + E AF F +ML + P
Sbjct: 121 FAQKGDDAMVSKMFELMISNGVEPDVISWTSVISGLVQNFRNEAAFDAFKQMLGRGFLPT 180
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T+S+VL+A A A + +G +IH + V + +E D+ ++++LV +Y+KCG + +A +F
Sbjct: 181 SATISTVLAACATMANVRRGREIHGYAVVIRVEDDIYVRSALVDMYAKCGFISEASVLFY 240
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACNHVGLVE 449
+ ERN V++NSMI G+A +G +EA+ LF +M K EG + +TF +VL+AC+H G+VE
Sbjct: 241 MMPERNTVTWNSMIFGYANHGYCDEAIELFDQMEKSEGNKLDHLTFTAVLTACSHAGMVE 300
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G F M+ Y I P EHYACMVD+LGRAG+L EA D+I M +P VWGALLGA
Sbjct: 301 HGQSLFLLMQQKYKIVPRLEHYACMVDLLGRAGNLNEAYDMIKKMPVKPDLFVWGALLGA 360
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
R H ++ LA++AA+HL ELEP++A +++S+LY+ G + +R + K KR++ P
Sbjct: 361 CRNHGDIGLAEVAARHLAELEPENAGNNMLMSNLYADAGSWENVSRSKKMMKRKRLKNFP 420
Query: 570 GCSWI 574
GCSWI
Sbjct: 421 GCSWI 425
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 167/333 (50%), Gaps = 26/333 (7%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCKKGRVIEAREI 124
+D V NA++SGY + G +E + + M ++ +V+ W S++ G+ +KG ++
Sbjct: 74 KDLVALNAMLSGYGQHGFAKEGFALMDKMEKLGIKPNVITWNSLISGFAQKGDDAMVSKM 133
Query: 125 FDKM----PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
F+ M E +V++WT+++ G ++ E FD F M G S T++ + AC
Sbjct: 134 FELMISNGVEPDVISWTSVISGLVQNFRNEAAFDAFKQMLGRGFLPTSATISTVLAACAT 193
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
R G ++HG + DI + ++++ MY + GF+ EA+ +F MM +R+ V+WNS+
Sbjct: 194 MANVRRGREIHGYAVVIRVEDDIYVRSALVDMYAKCGFISEASVLFYMMPERNTVTWNSM 253
Query: 241 ISGYVHNGEIEEAYRLFERMPGK-----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
I GY ++G +EA LF++M D +++T ++T S G +E LF +M +K
Sbjct: 254 IFGYANHGYCDEAIELFDQMEKSEGNKLDHLTFTAVLTACSHAGMVEHGQSLFLLMQQKY 313
Query: 296 DVT-----WTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQ 349
+ + ++ EA+ +M++K V+P+ ++L A +
Sbjct: 314 KIVPRLEHYACMVDLLGRAGNLNEAY----DMIKKMPVKPDLFVWGALLGACRNHGDIGL 369
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGN 381
H+ + +E + + N L+S LY+ G+
Sbjct: 370 AEVAARHLAE--LEPENAGNNMLMSNLYADAGS 400
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 148/339 (43%), Gaps = 80/339 (23%)
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
I + +E DV S++D Y K G V +AR +FD+M EK++VA AM+ GY + ++G
Sbjct: 36 ILKYSIESDVYVISSLIDMYSKCGEVEKARRVFDRMVEKDLVALNAMLSGYGQHGFAKEG 95
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
F L M + G+ N IT NS+I+
Sbjct: 96 FALMDKMEKLGIKPNVITW-----------------------------------NSLISG 120
Query: 213 YGRLGFMDEANKVFSMM----SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV-- 266
+ + G +K+F +M + D +SW S+ISG V N E A+ F++M G+ F+
Sbjct: 121 FAQKGDDAMVSKMFELMISNGVEPDVISWTSVISGLVQNFRNEAAFDAFKQMLGRGFLPT 180
Query: 267 --SWTTMITGFSSKGNLEKSIE-----------------------------------LFN 289
+ +T++ ++ N+ + E LF
Sbjct: 181 SATISTVLAACATMANVRRGREIHGYAVVIRVEDDIYVRSALVDMYAKCGFISEASVLFY 240
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV-RPNQLTLSSVLSASAATATLN 348
MMPE++ VTW ++I G+ N+ +EA F +M + + + + LT ++VL+A + +
Sbjct: 241 MMPERNTVTWNSMIFGYANHGYCDEAIELFDQMEKSEGNKLDHLTFTAVLTACSHAGMVE 300
Query: 349 QGSQIHAHV-VKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
G + + K + + +V L + GN+ +AY
Sbjct: 301 HGQSLFLLMQQKYKIVPRLEHYACMVDLLGRAGNLNEAY 339
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---PARWRDSVCSNALIS 79
I EA +F MP RN V++ +MI G+ G EA EL+ M D + A+++
Sbjct: 232 ISEASVLFYMMPERNTVTWNSMIFGYANHGYCDEAIELFDQMEKSEGNKLDHLTFTAVLT 291
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVA-----WGSMVDGYCKKGRVIEAREIFDKMPEK-NV 133
G E +F M +K + + MVD + G + EA ++ KMP K ++
Sbjct: 292 ACSHAGMVEHGQSLFLLMQQKYKIVPRLEHYACMVDLLGRAGNLNEAYDMIKKMPVKPDL 351
Query: 134 VAWTAMV 140
W A++
Sbjct: 352 FVWGALL 358
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 280/521 (53%), Gaps = 62/521 (11%)
Query: 93 IFEAMVEK-DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
+F V+K +V +W S++ + G +EA F
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFS------------------------- 65
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
SMR+ + N T ++C G Q H FGF+ D+ + ++++
Sbjct: 66 ------SMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVD 119
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTM 271
MY + G + +A +F +S R+ VSW S+I+GYV N + A R+F+ M +D +SW ++
Sbjct: 120 MYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSI 179
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
I ++ G +S+E+F+ M + ++ + A+
Sbjct: 180 IAVYAQNGMSTESMEIFHRMVKDGEINYNAV----------------------------- 210
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
TLS+VL A A + + G IH V+KM +ES+V + S++ +Y KCG V A + F
Sbjct: 211 -TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 269
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ E+N+ S+++M++G+ +G +EAL +F +M G+ PN ITF+SVL+AC+H GL+EEG
Sbjct: 270 MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 329
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
+ +FK+M +++EPG EHY CMVD+LGRAG L EA DLI M P VWGALLGA R
Sbjct: 330 WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACR 389
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
H N+DL +++A+ L EL+P + YV+LS++Y+ G+ D R+R+ K + K PG
Sbjct: 390 MHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGF 449
Query: 572 SWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
S + +K +VH+FL G + ++I L+ +S +E +
Sbjct: 450 SLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGY 490
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 125/233 (53%), Gaps = 5/233 (2%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D S+AL+ Y K G +A +F+ + +++V+W SM+ GY + A +FD M
Sbjct: 110 DLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMA 169
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG-MAFNSITLTILFEACGRFFRYREGV 188
E++V++W +++ Y + + ++F M + G + +N++TL+ + AC R G
Sbjct: 170 ERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGK 229
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+H V + G + ++ +G SII MY + G ++ A K F M +++ SW+++++GY +G
Sbjct: 230 CIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHG 289
Query: 249 EIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
+EA +F M +++++ +++ S G LE+ F M + DV
Sbjct: 290 HAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDV 342
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 18/276 (6%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
++ R S+ +MIT + N+ + A +F M R+ +S+ ++I + + GM E+ E+
Sbjct: 137 ISHRNIVSWTSMITGYVQND-DAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEI 195
Query: 61 Y--------VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY 112
+ +N A +V SG ++G+C ++ + +E +V S++D Y
Sbjct: 196 FHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHD-QVIKMGLESNVFVGTSIIDMY 254
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
CK G+V AR+ FD+M EKNV +W+AMV GY ++ ++F M G+ N IT
Sbjct: 255 CKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFV 314
Query: 173 ILFEACGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ AC EG + F + + ++ + GR G++ EA + M
Sbjct: 315 SVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKL 374
Query: 232 R-DAVSWNSLISGY-----VHNGEIEEAYRLFERMP 261
R D V W +L+ V GEI A +LFE P
Sbjct: 375 RPDFVVWGALLGACRMHKNVDLGEI-SARKLFELDP 409
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 193/628 (30%), Positives = 315/628 (50%), Gaps = 77/628 (12%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPA---RWRDSVCSNALISGYLKVGRCEEAARI 93
++ A++ F F + ++L+ +M + ++ + L + Y G +A I
Sbjct: 58 TSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVI 117
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
F+ +V K+ W M+ GY G +P K++V + M+ CF
Sbjct: 118 FDGIVLKNSFLWNFMIRGYASNG-----------LPMKSLVLYREML-------CF---- 155
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
G ++ T + +ACG G +VH V G + DI +GNS++ MY
Sbjct: 156 ---------GQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMY 206
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD--FVSWTTM 271
+ G M A VF M++RD SWN++ISGY N + A+ +F+ M GK F TT+
Sbjct: 207 AKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLM-GKAGLFADCTTL 265
Query: 272 ITGFSSKGNLEKSIE---------------------------------------LFNMMP 292
+ S+ +L+ E LF +
Sbjct: 266 LGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVR 325
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
KD V+W ++I G+ N E+ R F M P+Q+T +VL A A L G
Sbjct: 326 WKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMS 385
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
IH+++VK +++ + +LV +YSKCG++ + R+F + ++++VS+++M++G+ +G
Sbjct: 386 IHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGR 445
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
G EA+++ MK ++P+ F S+LSAC+H GLV EG F M+ YN++P HY+
Sbjct: 446 GREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYS 505
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
CMVD+LGRAG L EA +I +M +P +W ALL A R H N+ LA+++AQ + ++ P
Sbjct: 506 CMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPK 565
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLD 592
+ Y+ LS++Y+ + D RVR + K ++KSPGCS+I L + VH FL G KS
Sbjct: 566 VVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQ 625
Query: 593 LKEIEVTLQTISKGTKEFDWPKHDWSLL 620
++I L + + KE + K D SL+
Sbjct: 626 TEDIYAKLNELKQQLKEAGY-KPDTSLV 652
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 156/357 (43%), Gaps = 51/357 (14%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA-EE 59
MA+R S+N MI+ N S AF +F M + + G + +A +E
Sbjct: 222 MAERDLTSWNTMISGYAKNADS-GTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKE 280
Query: 60 LYVNMPARWRDSVC------SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
V R+S+ +N+LI Y +A R+FE + KD V+W SM+ GY
Sbjct: 281 GKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYA 340
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
+ G E+ +F +M +DG G D +T
Sbjct: 341 RNGDAFESLRLFRRMA----------LDG--------SGPD-------------QVTFIA 369
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ AC + R G+ +H + + GFD + I+G +++ MY + G + + +VF M +
Sbjct: 370 VLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKS 429
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS----WTTMITGFSSKGNLEKSIELFN 289
VSW+++++GY +G EA + + M + +T++++ S G + + E+F
Sbjct: 430 LVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFY 489
Query: 290 MMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
M ++ +V ++ ++ +EA+ M +++P +++L+AS
Sbjct: 490 KMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTM---EIKPTSDIWAALLTAS 543
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 284/513 (55%), Gaps = 12/513 (2%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF--NSITLTILFEACGRF 181
+ D P++ V + ++ G D LF SMR G A + T + ++C
Sbjct: 76 VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
G Q+H +R G D ++ + +S I+MY R G D+A ++F M RD VSWN++I
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195
Query: 242 SGYVHNGEIEEAYRLFERM-----PGKDFVSWTTMITGFSSKGNLEKSIEL---FNMMPE 293
SG+ H G A +F + P D + +++ K +E L F+ M
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMG-KARVEDIALLKGVFDEMRF 254
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
K ++W A+++ + NNE + EA F+ M + + P+ +TL++VL + + L+ G +I
Sbjct: 255 KGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRI 314
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H + + M S + ++N+L+ +Y+ CG + +A +F ++ R++VS+ S+IS + ++G G
Sbjct: 315 HEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHG 374
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
EA++LF KM +GL P+ I F+++L+AC+H GL++ G YF SM + ++I P EHYAC
Sbjct: 375 REAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYAC 434
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDS 533
MVD+LGRAG + EA D I M +P VWGALLGA R H N+D+ LAA L+ L P
Sbjct: 435 MVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQ 494
Query: 534 ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDL 593
YV+LS++Y+ G+ D + VR + K I+K PG S L D+VH F G S
Sbjct: 495 TGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQS 554
Query: 594 KEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
K I L + + +E + P+ + +L +E +
Sbjct: 555 KMIYKKLSELLRRIREMGYNPEVEATLHDVEEE 587
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 148/324 (45%), Gaps = 50/324 (15%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK---GRVIEA-RE------ 123
+++ IS Y + GR ++A ++FE M +DVV+W +M+ G+ GR ++ RE
Sbjct: 160 AHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQC 219
Query: 124 ----------------------------IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
+FD+M K +++W AM+ Y + + +L
Sbjct: 220 PKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVEL 279
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
F+ M++ G+ +++TL + +CG G ++H ++ R ++L N+++ MY
Sbjct: 280 FMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYAN 339
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTM 271
G + EA VF M RD VSW S+IS Y +G EA LFE+M G+ D +++ +
Sbjct: 340 CGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAI 399
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+ S G L+ F M + + + ++ EA+ + + M
Sbjct: 400 LAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVM---P 456
Query: 327 VRPNQLTLSSVLSASAATATLNQG 350
++PN+ ++L A + ++ G
Sbjct: 457 IKPNERVWGALLGACRIHSNMDIG 480
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 8/223 (3%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLKVGR 86
+F M + +S+ AM+ + M EA EL++ M D+V ++ +V
Sbjct: 248 VFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSA 307
Query: 87 CEEAARIFEAMVEKDVVAW----GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
RI E + + + + +++D Y G + EAR++FD M ++VV+WT+++
Sbjct: 308 LSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISA 367
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ-VHGLVSRFGFDY 201
Y + + DLF M G+ +SI + AC G + + S F
Sbjct: 368 YGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAP 427
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISG 243
+ ++ + GR G + EA +M K + W +L+
Sbjct: 428 KLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGA 470
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/535 (33%), Positives = 294/535 (54%), Gaps = 39/535 (7%)
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
++K+G+ A + + +A MV Y G + A +FD++ + + + +++
Sbjct: 92 FIKLGQQAHAQIVLHGLQPNAFLA-AKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSII 150
Query: 141 DGYMK---VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
Y + + + M G+ ++ TL + ++C R G VHG R
Sbjct: 151 RAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRV 210
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G + D +G S+I MY V G I +A +LF
Sbjct: 211 GLEGDFYVGASLIDMY-------------------------------VKCGVIGDARKLF 239
Query: 258 ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
++M +D SW +I G+ +G + + +LF M ++ V+WTA+ISG+ N E+A
Sbjct: 240 DKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALG 299
Query: 318 WFIEMLR--KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F EML+ +++PN +T+ SVL A A +A L +G +IH + + + S+Q +L +
Sbjct: 300 LFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGM 359
Query: 376 YSKCGNVVDAYRIFTNIDE--RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
Y+KC ++V+A F I + +N++++N+MI+ +A +G G EA+++F M G+ P+ +
Sbjct: 360 YAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAV 419
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
TF+ +LS C+H GL++ G +F M T++++EP EHYAC+VD+LGRAG L EA +LI+
Sbjct: 420 TFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQ 479
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
M + P VWGALL A R+H NL++A+LAA+ L LEPD++ YV+LS+LY+ G +
Sbjct: 480 MPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEV 539
Query: 554 NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
++R K + ++KSPGCSWI + K HLF+ KS KEI L+ + + K
Sbjct: 540 KKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIK 594
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 120/224 (53%), Gaps = 8/224 (3%)
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+LI Y+K G +A ++F+ M+ +D+ +W +++ GY K+G + A ++F++M +N+V+
Sbjct: 221 SLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVS 280
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGG--MAFNSITLTILFEACGRFFRYREGVQVHGL 193
WTAM+ GY + E LF M + G M N +T+ + AC + G ++H
Sbjct: 281 WTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDF 340
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK--RDAVSWNSLISGYVHNGEIE 251
+ G + + ++ MY + + EA F M+++ ++ ++WN++I+ Y +G
Sbjct: 341 ANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGV 400
Query: 252 EAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
EA +FE M D V++ +++G S G ++ + FN M
Sbjct: 401 EAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDM 444
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 36 RNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGRCEEAARI 93
+N +++ MIT + G EA ++ NM D+V L+SG G +
Sbjct: 381 KNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNH 440
Query: 94 FEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAWTAMV 140
F M VE V + +VD + GR++EA+E+ +MP + W A++
Sbjct: 441 FNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALL 493
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 291/567 (51%), Gaps = 46/567 (8%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV S++ Y + V AR +FD+MP +++ +W AM+ GY C L++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY----CQSGNAKEALTLS 239
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G A +S+T+ L AC + GV +H + G + ++ + N +I +Y G +
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG------------ 262
+ KVF M RD +SWNS+I Y N + A LF+ M P
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 263 ----------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+D ++ ++ G ++ + +FN +P D ++W
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
IISG+ N EA + M + ++ NQ T SVL A + L QG ++H ++K
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ DV + SL +Y KCG + DA +F I N V +N++I+ +G GE+A+ L
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 539
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F++M DEG+ P+ ITF+++LSAC+H GLV+EG F+ M+T Y I P +HY CMVD+ G
Sbjct: 540 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYG 599
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L A+ I SM+ +P +WGALL A R H N+DL K+A++HL E+EP+ +V+
Sbjct: 600 RAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVL 659
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
LS++Y+ GK + +R K +RK+PG S + + +KV +F G ++ +E+
Sbjct: 660 LSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE 719
Query: 600 LQTISKGTKEFDW-PKHDWSLLGLERD 625
L + K + P H + L +E D
Sbjct: 720 LTALQAKLKMIGYVPDHRFVLQDVEDD 746
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 236/505 (46%), Gaps = 56/505 (11%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L+ +C A + ++ +V +V+ YC G V AR FD + ++V AW M+
Sbjct: 67 LQSAKCLHARLVVSKQIQ-NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 142 GYMKVDCFEDGFDLF-LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY + + F L M G+ + T + +AC +G ++H L +FGF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFM 182
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+D+ + S+I +Y R + A +F M RD SWN++ISGY +G +EA L +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSI----------------------------------- 285
D V+ ++++ + G+ + +
Sbjct: 243 RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
++F+ M +D ++W +II + NEQ A F EM ++P+ LTL S+ S +
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 346 TLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+ + ++ D++I N++V +Y+K G V A +F + +++S+N++I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 405 SGFAQNGLGEEALNLFRKMKDEG-LVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLY 462
SG+AQNG EA+ ++ M++EG + NQ T++SVL AC+ G + +G ++ + +K
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV----WGALLGAGRTHLNLDL 518
++ + D+ G+ G L +A+ L F P V W L+ H + +
Sbjct: 483 YLDVFV--VTSLADMYGKCGRLEDALSL-----FYQIPRVNSVPWNTLIACHGFHGHGEK 535
Query: 519 AKLAAQHLME--LEPDSATPYVVLS 541
A + + +++ ++PD T +LS
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 224/527 (42%), Gaps = 88/527 (16%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCE 88
+F MP+R+ S+ AMI+G+ + G EA L ++ R DSV +L+S + G
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEA--LTLSNGLRAMDSVTVVSLLSACTEAGDFN 264
Query: 89 EAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
I + E ++ ++D Y + GR+ + +++FD+M +++++W +++ Y
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDI 203
+ LF MR + + +TL L + R V G R G F DI
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+GN+++ MY +LG +D A VF+ + D +SWN++ISGY NG EA ++ M +
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE 444
Query: 264 DFV-----SWTTMITGFSSK-----------------------------------GNLEK 283
+ +W +++ S G LE
Sbjct: 445 GEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLED 504
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
++ LF +P + V W +I+ + E+A F EML + V+P+ +T ++LSA +
Sbjct: 505 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 564
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+ +++G M++D I SL Y M
Sbjct: 565 SGLVDEGQWCFEM-----MQTDYGITPSL-------------------------KHYGCM 594
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
+ + + G E AL + M L P+ + ++LSAC G V+ G I + + L+
Sbjct: 595 VDMYGRAGQLETALKFIKSMS---LQPDASIWGALLSACRVHGNVDLGKI---ASEHLFE 648
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMT----FEPPPGVWGAL 506
+EP Y ++ + + E +D I S+ PG W ++
Sbjct: 649 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG-WSSM 694
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 298/560 (53%), Gaps = 50/560 (8%)
Query: 103 VAWGSMVDGYCKKGRVIEAREIFD--KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
+A S+++ Y K + + +F+ KNV A+ A++ G++ + L+ MR
Sbjct: 65 LAITSLINMYSKCSLIDHSLRVFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMR 124
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G+A + T + ACG ++HGL+ + G + D+ +G++++ Y + F+
Sbjct: 125 HLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVG 184
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG----FS 276
EA +VF + RD V WN++++G+ G EEA +F RM G V +TG FS
Sbjct: 185 EAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFS 244
Query: 277 SKGNLEK-----------------------------------SIELFNMMPEKDDVTWTA 301
G+ + ++ +F MM E D +W +
Sbjct: 245 VMGDFDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNS 304
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVV-- 358
I+S + R F M+ V+P+ +T+++VL A A L G +IH ++V
Sbjct: 305 IMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVN 364
Query: 359 ------KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
++ DV + N+L+ +Y+KCGN+ DA +F N+ E+++ S+N MI+G+ +G
Sbjct: 365 GLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGY 424
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
G EAL++F +M +VPN+I+F+ +LSAC+H G+V+EG + M++ Y + P EHY
Sbjct: 425 GGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYT 484
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
C++D+L RAG L EA DL+ +M F+ P W +LL A R H + DLA++AA ++ELEPD
Sbjct: 485 CVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPD 544
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLD 592
YV++S++Y V+G+ + R K + ++K PGCSWI L + VH+F+ G ++
Sbjct: 545 HCGNYVLMSNVYGVVGRYEEVLEWRYTMKQQNVKKRPGCSWIELVNGVHVFITGDRTHPQ 604
Query: 593 LKEIEVTLQTISKGTKEFDW 612
+ I L +++ +E +
Sbjct: 605 TEYIYAGLNSLTAVLQEHGY 624
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 42/333 (12%)
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
RG ++ T ++C +G ++H + + F + S+I MY + +D
Sbjct: 22 RGFSTYDLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLID 81
Query: 221 EANKVFSMMSK--RDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK--------- 263
+ +VF+ + ++ ++N+LI+G++ N + A L+ +M P K
Sbjct: 82 HSLRVFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRA 141
Query: 264 ----DFVSWTTMITGFSSKGNLE--------------------KSIELFNMMPEKDDVTW 299
D T I G K LE ++ +F +P +D V W
Sbjct: 142 CGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLW 201
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
A+++GF ++EEA F M V P + T++ VLS + + G +H V K
Sbjct: 202 NAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTK 261
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
M ES V + N+L+ +Y KC V DA +F +DE +I S+NS++S + G L L
Sbjct: 262 MGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRL 321
Query: 420 FRKMKDEGLV-PNQITFLSVLSACNHVGLVEEG 451
F +M V P+ +T +VL AC H+ + G
Sbjct: 322 FDRMMGSSRVQPDLVTVTTVLPACTHLAALMHG 354
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 186/467 (39%), Gaps = 122/467 (26%)
Query: 13 ITALIN--NNCSIYE-AFEIF--ATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--- 64
IT+LIN + CS+ + + +F T +N +Y A+I GF+ + A LY M
Sbjct: 67 ITSLINMYSKCSLIDHSLRVFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHL 126
Query: 65 ---------PARWR-------------------------DSVCSNALISGYLKVGRCEEA 90
P R D +AL++ YLK EA
Sbjct: 127 GIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEA 186
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
R+FE + +DVV W +MV+G+ + GR EA +F +M VV V G + +
Sbjct: 187 YRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSI---- 242
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
F G F G VHG V++ G++ +++ N++I
Sbjct: 243 ------------------------FSVMGDF---DNGRAVHGFVTKMGYESGVVVSNALI 275
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DF 265
MYG+ + +A VF MM + D SWNS++S + G+ RLF+RM G D
Sbjct: 276 DMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDL 335
Query: 266 VSWTTMITG-------------------------------------------FSSKGNLE 282
V+ TT++ ++ GN+
Sbjct: 336 VTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMR 395
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+ +F M EKD +W +I+G+ + EA F M + + PN+++ +LSA +
Sbjct: 396 DARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACS 455
Query: 343 ATATLNQGSQIHAHV-VKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ +G + + K + + ++ + + G +++AY +
Sbjct: 456 HAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDL 502
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 28/324 (8%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNAL 77
EA+ +F +P+R+ V + AM+ GF + G F EA ++ M P R+ V S
Sbjct: 185 EAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFS 244
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G GR + + E VV +++D Y K V +A +F+ M E ++ +W
Sbjct: 245 VMGDFDNGRAVHGF-VTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWN 303
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGG-MAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+++ + + LF M + + +T+T + AC G ++HG +
Sbjct: 304 SIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVV 363
Query: 197 FG---------FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
G FD D++L N+++ MY + G M +A VF M ++D SWN +I+GY +
Sbjct: 364 NGLAKEESHDVFD-DVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMH 422
Query: 248 GEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGNLEKSIELFNMMPEKDDVT----- 298
G EA +F RM V S+ +++ S G +++ + + M K V+
Sbjct: 423 GYGGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEH 482
Query: 299 WTAIISGFVNNEQYEEAFRWFIEM 322
+T +I Q EA+ + M
Sbjct: 483 YTCVIDMLCRAGQLMEAYDLVLTM 506
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT-- 390
T + L + A A L++G ++H H++K SL+++YSKC + + R+F
Sbjct: 31 TCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFP 90
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+N+ +YN++I+GF N L + AL L+ +M+ G+ P++ TF V+ AC G ++
Sbjct: 91 THHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRAC---GDDDD 147
Query: 451 GFIYFKSMKTLYNI 464
GF+ K ++ +
Sbjct: 148 GFVVTKIHGLMFKV 161
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/525 (33%), Positives = 273/525 (52%), Gaps = 45/525 (8%)
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
ARW D+V I+ ++VG ++D ++V Y RV EAR +F
Sbjct: 6 ARWTDTVRGTHGIA--VRVG------------ADEDGFVGTALVGAYAACQRVAEARRVF 51
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
D MPE+++VAW M+D Y + + L M+R + + + L + CG R
Sbjct: 52 DGMPERDLVAWGVMLDSYFNTQNYRETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLR 111
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G +H + D L +++I MY M+ A+K++S M +
Sbjct: 112 SGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMADKIYSGMQR-------------- 157
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
KD VS T M+ G++ G +E + +FN M EKD V+W+A+IS
Sbjct: 158 -----------------KDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISA 200
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
+ N Q E F +M V P+++T+ SV+SA A +L++ IH+ V
Sbjct: 201 YAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKI 260
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+SI N+L+ ++SKCG++ A +F + +N++++ SMI+ FA +G G AL LF +MK
Sbjct: 261 LSICNALIDMFSKCGSLTLALNMFNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKG 320
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
EG+ PN +TFL +L AC H GLV EG F+ M Y IEP EHY CMVD++GRA +
Sbjct: 321 EGVEPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQ 380
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYS 545
EA+DLI SM P +WG+LL A H +++L + AA+ ++EL+P+ YV+LS++++
Sbjct: 381 EAVDLIESMHIRPNVAIWGSLLAACWMHGDIELGEFAAKKILELDPNHDGAYVLLSNIHA 440
Query: 546 VIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSC 590
G + ++R+ K+ + K G SW+ L VH F C
Sbjct: 441 KSGNWNNAQKLRVMMKVHGVSKETGYSWLELNCTVHGFQLETHDC 485
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 168/337 (49%), Gaps = 13/337 (3%)
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y+ + + D+ S+ALI+ Y E A +I+ M KD+V+ +MV GY K G++
Sbjct: 119 YIQVSDIFVDARLSSALINMYASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEI 178
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR IF+ M EK+VV+W+AM+ Y + + + +LF M+ G++ + IT+ + AC
Sbjct: 179 ARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACAN 238
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ +H +V GF + + N++I M+ + G + A +F+ M +++ ++W S+
Sbjct: 239 IGSLDKARWIHSIVGNHGFYKILSICNALIDMFSKCGSLTLALNMFNAMPRKNVITWTSM 298
Query: 241 ISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
I+ + +G+ A LF +M G+ + V++ ++ G + + LF M ++
Sbjct: 299 IAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYR 358
Query: 297 VT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ + ++ + +EA IE + +RPN S+L+A + G
Sbjct: 359 IEPKHEHYGCMVDLMGRAKLMQEAVD-LIESMH--IRPNVAIWGSLLAACWMHGDIELGE 415
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+++++ D + L ++++K GN +A ++
Sbjct: 416 FAAKKILELDPNHDGAYV-LLSNIHAKSGNWNNAQKL 451
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 106/276 (38%), Gaps = 44/276 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMP----MRNAVSYAAMITGFVRRGMFYE 56
MA++ S++AMI+A NN E +F M + ++ ++I+ G +
Sbjct: 186 MAEKDVVSWSAMISAYAENN-QPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDK 244
Query: 57 AEELY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
A ++ V ++ NALI + K G A +F AM K+V+ W SM+ +
Sbjct: 245 ARWIHSIVGNHGFYKILSICNALIDMFSKCGSLTLALNMFNAMPRKNVITWTSMIAAFAM 304
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G DG LF M+ G+ N +T +L
Sbjct: 305 HG------------------------DG-------PSALTLFGQMKGEGVEPNGVTFLVL 333
Query: 175 FEACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
AC EG + ++ + + ++ + GR M EA + M R
Sbjct: 334 LYACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRP 393
Query: 234 AVS-WNSLISGYVHNGEIE----EAYRLFERMPGKD 264
V+ W SL++ +G+IE A ++ E P D
Sbjct: 394 NVAIWGSLLAACWMHGDIELGEFAAKKILELDPNHD 429
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/560 (30%), Positives = 289/560 (51%), Gaps = 71/560 (12%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V ++ + Y K E+A ++F+ M E+DV +W +++ Y + G+ P
Sbjct: 332 DVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ-----------P 380
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
EK +LF M+ G +S+TLT + +C R G +
Sbjct: 381 EK--------------------ALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKE 420
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + R GF D + ++++ MYG+ G ++ A +VF + +++ VSWNS+I+GY G+
Sbjct: 421 IHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGD 480
Query: 250 IEEAYRLFERMP--------------------------GK-------------DFVSWTT 270
+ LF RM GK D ++
Sbjct: 481 SKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSS 540
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I + GN+ + +F MP+ + V+W +ISG+V Y EA F +M + V+P+
Sbjct: 541 LIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPD 600
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+T +SVL A + A L +G +IH +++ +E + + +L+ +Y+KCG V +A IF
Sbjct: 601 AITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFN 660
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ ER+ VS+ SMI+ + +G EAL LF KM+ P+++TFL++LSAC+H GLV+E
Sbjct: 661 QLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDE 720
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN-SMTFEPPPGVWGALLGA 509
G YF M Y +P EHY+C++D+LGR G L EA +++ + G+ L A
Sbjct: 721 GCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSA 780
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
H LDL + + L+E +PD + Y++LS++Y+ + K + +VR+K K ++K+P
Sbjct: 781 CHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNP 840
Query: 570 GCSWIILKDKVHLFLAGRKS 589
GCSWI + ++H F+ KS
Sbjct: 841 GCSWIEVGKRIHPFVVEDKS 860
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 227/469 (48%), Gaps = 55/469 (11%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAWTAMVDGYMKVDCFE 150
+I ++ ++ S+++ Y A+ +F + ++ W ++ K F
Sbjct: 220 KIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFI 279
Query: 151 DGFDLFLSMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
+G ++F + + ++ T + +AC R G VH V + GF D+++ +S
Sbjct: 280 EGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSA 339
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF---- 265
+ MY + ++A K+F M +RD SWN++IS Y +G+ E+A LFE M F
Sbjct: 340 VGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDS 399
Query: 266 VSWTTMIT--------------------------GFSSK---------GNLEKSIELFNM 290
V+ TT+I+ GF S G LE + E+F
Sbjct: 400 VTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQ 459
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+ K+ V+W ++I+G+ + F M + +RP TLSS+L A + + L G
Sbjct: 460 IQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLG 519
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
IH ++++ +E+D+ + +SL+ LY KCGN+ A +F N+ + N+VS+N MISG+ +
Sbjct: 520 KFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKV 579
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN------I 464
G EAL +F M+ G+ P+ ITF SVL AC+ + ++E+G K ++N +
Sbjct: 580 GSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKG-------KEIHNFIIESKL 632
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
E ++D+ + G++ EA+ + N + E W +++ A +H
Sbjct: 633 EINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSWTSMIAAYGSH 680
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 197/417 (47%), Gaps = 47/417 (11%)
Query: 20 NCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNA 76
C+++E A ++F MP R+ S+ +I+ + + G +A EL+ M DSV
Sbjct: 345 KCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTT 404
Query: 77 LISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
+IS ++ E I +V D ++VD Y K G + A+E+F+++ KN
Sbjct: 405 VISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKN 464
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VV+W +M+ GY + +LF M G+ TL+ + AC R + G +HG
Sbjct: 465 VVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHG 524
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ R + DI + +S+I +Y + G + A VF M K + VSWN +ISGYV G E
Sbjct: 525 YIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLE 584
Query: 253 AYRLFERM----PGKDFVSWTTMITGFSSKGNLEK------------------------- 283
A +F M D +++T+++ S LEK
Sbjct: 585 ALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLD 644
Query: 284 ----------SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ +FN +PE+D V+WT++I+ + ++ Q EA + F +M + D +P+++T
Sbjct: 645 MYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVT 704
Query: 334 LSSVLSASAATATLNQGS-QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
++LSA + +++G + + + + V + L+ L + G + +AY I
Sbjct: 705 FLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEIL 761
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 181/363 (49%), Gaps = 30/363 (8%)
Query: 14 TALIN--NNCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA---R 67
+AL++ C E A E+F + +N VS+ +MI G+ +G EL+ M R
Sbjct: 438 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 497
Query: 68 WRDSVCSNALI----SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
+ S+ L+ S L++G+ I VE D+ S++D Y K G + A
Sbjct: 498 PTLTTLSSILMACSRSVNLQLGKFIHG-YIIRNRVEADIFVNSSLIDLYFKCGNIGSAEN 556
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F MP+ NVV+W M+ GY+KV + + +F MR+ G+ ++IT T + AC +
Sbjct: 557 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 616
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+G ++H + + + ++ +++ MY + G +DEA +F+ + +RD VSW S+I+
Sbjct: 617 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 676
Query: 244 YVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM-------P 292
Y +G+ EA +LFE+M D V++ +++ S G +++ FN M P
Sbjct: 677 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 736
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK--DVRPNQLTLSSVLSASAATATLNQG 350
+ + + G V + EA+ E+L++ D+R + LS++ SA L+ G
Sbjct: 737 AVEHYSCLIDLLGRVG--RLREAY----EILQRTPDIREDVGLLSTLFSACHLHKKLDLG 790
Query: 351 SQI 353
QI
Sbjct: 791 EQI 793
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 15/233 (6%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L+ V + SA L G IH +V + +++++++ SL++LY C A +F I+
Sbjct: 200 LARVTAGSALEELL--GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIE 257
Query: 394 ER-NIVSYNSMISGFAQNGLGEEALNLF-RKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+I +N +++ +N + E L +F R + L P+ T+ SVL AC+ +G V G
Sbjct: 258 NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 317
Query: 452 -FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA- 509
++ +K+ + ++ A V + + +AI L + M E W ++
Sbjct: 318 KMVHTHVIKSGFAMDVVVMSSA--VGMYAKCNVFEDAIKLFDEMP-ERDVASWNNVISCY 374
Query: 510 ---GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
G+ L+L + +PDS T V+S ++ +R G + M+
Sbjct: 375 YQDGQPEKALEL--FEEMKVSGFKPDSVTLTTVISSCARLLDLER-GKEIHME 424
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 301/548 (54%), Gaps = 42/548 (7%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ GY K G + A ++F + +++ V+W M+ G++ + FE + SM+R G A
Sbjct: 39 NIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAV 98
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ + + + G QVH ++ + G++ ++ G++++ MY + +++A +VF
Sbjct: 99 DGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVF 158
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------- 261
++ R++V+WN+LISGY G+ A+ L + M
Sbjct: 159 KSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHK 218
Query: 262 --------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK---DDVTWTAIIS 304
D +IT +S G++E + +F+ E D V+W +I++
Sbjct: 219 LTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILT 278
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
GF + E+A ++F M + V + S+VL + + ATL G Q+H V+K E
Sbjct: 279 GFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEP 338
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
+ + +SL+ +YSKCG + DA + F + + +++NS+I G+AQ+G G+ AL+LF MK
Sbjct: 339 NGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMK 398
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
D + + ITF++VL+AC+H+GLVEEG+ + KSM++ Y I P EHYACM+D+LGRAG L
Sbjct: 399 DRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRL 458
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLY 544
EA LI +M FEP VW LLGA RT +++LA A HL+ELEP+ YV+LS ++
Sbjct: 459 DEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMF 518
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
+ + + ++ K + ++K PG SWI +K++V F A +S + +EI + L +
Sbjct: 519 GHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELM 578
Query: 605 KGTKEFDW 612
+ + D+
Sbjct: 579 EEIRRLDY 586
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 187/387 (48%), Gaps = 61/387 (15%)
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
YR V H L + G I N+II+ Y + G + A+K+F S+RDAVSWN++I+G
Sbjct: 16 YRASVN-HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAG 74
Query: 244 YVHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKG-------------------- 279
+V+ G E A + M F S+ +++ G + G
Sbjct: 75 FVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGN 134
Query: 280 ---------------NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+E + E+F + ++ VTW A+ISG+ AF W ++ +
Sbjct: 135 VFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAF-WLLDCME 193
Query: 325 -KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ V + T + +L+ +Q+HA +VK + SD ++ N++++ YS+CG++
Sbjct: 194 LEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIE 253
Query: 384 DAYRIFTN-IDERNI--VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
DA R+F I+ R++ VS+NS+++GF+Q+GL E+AL F M+ + +V + F +VL
Sbjct: 254 DAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLR 313
Query: 441 ACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
+C+ + ++ G ++ +K+ EP + ++ + + G + +A +F+
Sbjct: 314 SCSDLATLQLGQQVHVLVLKS--GFEPNGFVASSLIFMYSKCGVIEDA-----RKSFDAT 366
Query: 500 PG----VWGALL----GAGRTHLNLDL 518
P W +L+ GR + LDL
Sbjct: 367 PKDSSIAWNSLIFGYAQHGRGKIALDL 393
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 123/509 (24%), Positives = 206/509 (40%), Gaps = 90/509 (17%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR---DSVCSNALISGYL 82
A ++F R+AVS+ MI GFV G F A E +M R+ D +++ G
Sbjct: 53 ASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMK-RYGFAVDGYSFGSILKGVA 111
Query: 83 KVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
VG E ++ MV E +V A +++D Y K RV +A E+F + +N V W A
Sbjct: 112 CVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNA 171
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ GY +V F L M G+ + T L ++ QVH + + G
Sbjct: 172 LISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHG 231
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKR--DAVSWNSLISGYVHNGEIEEAYR 255
D + N+IIT Y G +++A +VF + R D VSWNS+++G+ +G E+A +
Sbjct: 232 LASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALK 291
Query: 256 LFERMPGK----------------------------------------DFVSWTTMITGF 275
FE M + FV+ +++I +
Sbjct: 292 FFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVA-SSLIFMY 350
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
S G +E + + F+ P+ + W ++I G+ + + + A F M + V+ + +T
Sbjct: 351 SKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFV 410
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VL+A + + +G +MESD I +
Sbjct: 411 AVLTACSHIGLVEEGWSF-----LKSMESDYGIPPRM----------------------- 442
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
Y MI + G +EA L M E P+ + + ++L AC G +E
Sbjct: 443 --EHYACMIDLLGRAGRLDEAKALIEAMPFE---PDAMVWKTLLGACRTCGDIE-----L 492
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSL 484
S + +E PE + V + G L
Sbjct: 493 ASQVASHLLELEPEEHCTYVLLSSMFGHL 521
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 3/170 (1%)
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
LS S+ TA L + S H +K + + N+++S Y+KCG + A ++F +R+
Sbjct: 7 LSQSSFTA-LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDA 65
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
VS+N+MI+GF G E AL + MK G + +F S+L VG VE G S
Sbjct: 66 VSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVG-QQVHS 124
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
M E + ++D+ + + +A ++ S+ W AL+
Sbjct: 125 MMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSV-TWNALI 173
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 275/508 (54%), Gaps = 38/508 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV + + + +G + AR +FD+ P ++VV+W ++ GY++ + +LF +
Sbjct: 155 DVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLA 214
Query: 161 RGGMAFNSITLTIL--FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
G A +T++ C + G ++H V G + L N+++ MY
Sbjct: 215 EDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMY----- 269
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSK 278
V G +E A +FER+ + VSWTTMI G +
Sbjct: 270 --------------------------VKCGSLELANSVFERISNRTAVSWTTMIVGHARL 303
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G +E + LF+ MPE+D W A+++G+V N+Q +EA F EM + V PN++T+ ++L
Sbjct: 304 GMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLL 363
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA + L G +H ++ + + V++ SLV +Y+KCGN+ A +F I +N +
Sbjct: 364 SACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNAL 423
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++ SMI G A +G +EA+ F++M D GL P++ITF+ VLSAC H GLVE G +F M
Sbjct: 424 TWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLM 483
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
Y++E +HY+CM+D+LGRAG L EA L+N+M +P VWGAL A R H N+ L
Sbjct: 484 HAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITL 543
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+ AA L+EL+P + YV+L+++Y+ ++ ++VR+ + + K PGCS I L
Sbjct: 544 GEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNG 603
Query: 579 KVHLFLAGRKSCLDLKEI-----EVTLQ 601
VH F+ KS LD I E+TLQ
Sbjct: 604 VVHEFIVKDKSHLDTNAIYDCLHEITLQ 631
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 161/357 (45%), Gaps = 80/357 (22%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY------------------------ 61
A +F P+R+ VS+ +I G+VR G+ EA EL+
Sbjct: 175 ARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGC 234
Query: 62 -----VNMPARWRDSV------CS----NALISGYLKVGRCEEAARIFEAMVEKDVVAWG 106
+ + R + V C+ NA++ Y+K G E A +FE + + V+W
Sbjct: 235 AQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWT 294
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+M+ G+ + G + +AR +FD+MPE++V W A++ GY++ ++ LF M++ +
Sbjct: 295 TMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDP 354
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
N IT+ L AC + G+ VH + R + LG S++ MY + G + +A VF
Sbjct: 355 NEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVF 414
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------------------------- 260
+ + ++A++W S+I G ++G +EA F+RM
Sbjct: 415 NEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVE 474
Query: 261 PGKDFVS--------------WTTMITGFSSKGNLEKSIELFNMMP-EKDDVTWTAI 302
G+ F S ++ MI G+L+++ +L N MP + D V W A+
Sbjct: 475 AGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGAL 531
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 49/315 (15%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ A +F + R AVS+ MI G R GM +A L+ MP RD NAL++GY
Sbjct: 274 SLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPE--RDVFPWNALMAGY 331
Query: 82 LKVGRCEEAARIFEAMVEKDV--------------------------------------V 103
++ + +EA +F M + V V
Sbjct: 332 VQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSV 391
Query: 104 AWG-SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
A G S+VD Y K G + +A +F+++P +N + WT+M+ G ++ + F M
Sbjct: 392 ALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDL 451
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLV-SRFGFDYDIILGNSIITMYGRLGFMDE 221
G+ + IT + AC G Q L+ +++ + + + +I + GR G +DE
Sbjct: 452 GLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDE 511
Query: 222 ANKVFSMMS-KRDAVSWNSLISGYVHNGEI----EEAYRLFERMPGKDFVSWTTMITGFS 276
A ++ + M DAV W +L +G I + A +L E P + ++
Sbjct: 512 AEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGI--YVLLANMY 569
Query: 277 SKGNLEKSIELFNMM 291
++ N+ K + +M
Sbjct: 570 AEANMRKKADKVRVM 584
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
RP+ LT ++ A A + G+ + HV K+ +DV + N+ + +S G + A R
Sbjct: 118 RPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARR 177
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG--LVPNQITFLSVLSACNHV 445
+F R++VS+N++I G+ ++GL EAL LF ++ ++G + P+++T + +S C +
Sbjct: 178 LFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQM 237
Query: 446 GLVEEG 451
G +E G
Sbjct: 238 GDLELG 243
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 286/535 (53%), Gaps = 42/535 (7%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + AR++FD +P + W A++ GY + + F+D ++ +M+ ++ +S T L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS--MMSKRD 233
+AC + G VH V R GFD D+ + N +I +Y + + A VF + +R
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLE--KSIE- 286
VSW +++S Y NGE EA +F M D+V+ +++ F+ +L+ +SI
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 287 --------------------------------LFNMMPEKDDVTWTAIISGFVNNEQYEE 314
LF+ M + + W A+ISG+ N E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F EM+ KDVRP+ ++++S +SA A +L Q ++ +V + + DV I ++L+
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+++KCG+V A +F +R++V +++MI G+ +G EA++L+R M+ G+ PN +T
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
FL +L ACNH G+V EG+ +F M + I P +HYAC++D+LGRAG L +A ++I M
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
+P VWGALL A + H +++L + AAQ L ++P + YV LS+LY+
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
VR++ K K + K GCSW+ ++ ++ F G KS +EIE ++ I KE
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 169/367 (46%), Gaps = 57/367 (15%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + G + L +I G + A +VF + + WN++I GY N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 249 EIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKS----IELFNM---------- 290
++A ++ M D ++ ++ S +L+ ++F +
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 291 -----------------------MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+PE+ V+WTAI+S + N + EA F M + DV
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDV 218
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ + L SVL+A L QG IHA VVKM +E + + SL ++Y+KCG V A
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + N++ +N+MISG+A+NG EA+++F +M ++ + P+ I+ S +SAC VG
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHY-------ACMVDILGRAGSLAEAIDLINSMTFEPPP 500
+E+ +++Y G Y + ++D+ + GS+ E L+ T +
Sbjct: 339 LEQA-------RSMYEY-VGRSDYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDV 389
Query: 501 GVWGALL 507
VW A++
Sbjct: 390 VVWSAMI 396
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 188/429 (43%), Gaps = 52/429 (12%)
Query: 12 MITALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-AR 67
+IT LI+ + S I A ++F +P + A+I G+ R F +A +Y NM AR
Sbjct: 55 LITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 68 WR-DSVCSNALISG-----YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
DS L+ +L++GR A++F + DV ++ Y K R+ A
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVH-AQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173
Query: 122 REIFD--KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
R +F+ +PE+ +V+WTA+V Y + + ++F MR+ + + + L + A
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFT 233
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
++G +H V + G + + L S+ TMY + G + A +F M + + WN+
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK------------ 283
+ISGY NG EA +F M KD +S T+ I+ + G+LE+
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 284 -------------------SIE----LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
S+E +F+ ++D V W+A+I G+ + + EA +
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M R V PN +T +L A + + +G + + ++ L + G
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAG 473
Query: 381 NVVDAYRIF 389
++ AY +
Sbjct: 474 HLDQAYEVI 482
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 141/276 (51%), Gaps = 9/276 (3%)
Query: 237 WNSLISGYVHNGEIEEAY-RLFERMPGKDFVSW--TTMITGFSSKGNLEKSIELFNMMPE 293
+ SLI H ++++ + RL + G F + T +I SS G++ + ++F+ +P
Sbjct: 24 YASLIDSATHKAQLKQIHARLL--VLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR 81
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
W AII G+ N +++A + M V P+ T +L A + + L G +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN--IDERNIVSYNSMISGFAQNG 411
HA V ++ ++DV +QN L++LY+KC + A +F + ER IVS+ +++S +AQNG
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
EAL +F M+ + P+ + +SVL+A + +++G S+ + +E P+
Sbjct: 202 EPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM-GLEIEPDLL 260
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+ + + G +A A L + M P +W A++
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 112/264 (42%), Gaps = 43/264 (16%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMRN----AVSYAAMITGFVRRGMFYEAEELYVNM 64
+NAMI+ N + EA ++F M ++ +S + I+ + G +A +Y +
Sbjct: 291 WNAMISGYAKNGYA-REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 65 P-ARWRDSV-CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
+ +RD V S+ALI + K G E A +F+ +++DVV W +M+ GY GR EA
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA- 408
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
L+ +M RGG+ N +T L AC
Sbjct: 409 ------------------------------ISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLI 241
REG L++ + +I + GR G +D+A +V M + V+ W +L+
Sbjct: 439 MVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 242 SGYVHNGEIE----EAYRLFERMP 261
S + +E A +LF P
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDP 522
>gi|414878289|tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea mays]
Length = 534
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/493 (34%), Positives = 271/493 (54%), Gaps = 9/493 (1%)
Query: 120 EAREIFDK-MPE--KNVVAWTAMVDGYMK-----VDCFEDGFDLF-LSMRRGGMAFNSIT 170
AR +FD +P +NV WTA + Y + E LF L +R G N+ T
Sbjct: 37 HARAVFDNAVPTACENVYLWTATIAAYARHASSSPSVAEGALTLFRLMLRHGVPRPNAFT 96
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ + C R G+QVHG + G + +++ MYG G + +A +VF MS
Sbjct: 97 ASSVVRCCSALRAVRVGIQVHGFLVNAGLGRAEHVRAALVDMYGNHGRVADARRVFDEMS 156
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
V N++++ YV G++E +F+RM +D +SW T++ G+ +G + ELF
Sbjct: 157 ATSVVLGNTMVACYVRAGDVESGRVVFDRMVERDLISWNTLMMGYLRQGGAGVARELFEE 216
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP+++ +W I+ + + +A F M +P+ T++ ++SA A +L+
Sbjct: 217 MPDRNVNSWNMAIAAYSQERSWADAVAVFNRMRLARFQPDPATMAVLMSACAQLGSLSVA 276
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q+H + K +E + + NSL+ +Y+KCG++ A+ +F ++ VSYN MI A++
Sbjct: 277 RQVHGILRKGCVEMNFHVLNSLIDMYAKCGSISQAHLLFVETHLKDTVSYNVMICALARH 336
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
G G +AL +F +M E L P+ +T L VLSAC H GLV +G YF+SMKT Y IE P+H
Sbjct: 337 GHGRDALQVFDEMSKERLQPDAVTLLGVLSACAHAGLVHDGKFYFESMKTNYAIEQSPDH 396
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE 530
YACMVD+ GRAG + EA +L +M EP GVWGAL+ A R H N+++ K+AA+ L+ +E
Sbjct: 397 YACMVDLYGRAGLIKEAYELARAMPMEPHAGVWGALINACRKHCNVEVGKVAARELIAIE 456
Query: 531 PDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSC 590
P + YV+L++ + + V + K I K+ GCSW+ +++ VH FL G S
Sbjct: 457 PRNPGTYVLLANTLARGQQWEFVETVWQSMRGKGIEKTAGCSWLEVENVVHEFLMGESSH 516
Query: 591 LDLKEIEVTLQTI 603
+ EI L+ +
Sbjct: 517 PNSDEIYSILEHL 529
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 115/219 (52%), Gaps = 2/219 (0%)
Query: 42 AAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKD 101
AA++ + G +A ++ M A V N +++ Y++ G E +F+ MVE+D
Sbjct: 133 AALVDMYGNHGRVADARRVFDEMSAT--SVVLGNTMVACYVRAGDVESGRVVFDRMVERD 190
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
+++W +++ GY ++G ARE+F++MP++NV +W + Y + + D +F MR
Sbjct: 191 LISWNTLMMGYLRQGGAGVARELFEEMPDRNVNSWNMAIAAYSQERSWADAVAVFNRMRL 250
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
+ T+ +L AC + QVHG++ + + + + NS+I MY + G + +
Sbjct: 251 ARFQPDPATMAVLMSACAQLGSLSVARQVHGILRKGCVEMNFHVLNSLIDMYAKCGSISQ 310
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
A+ +F +D VS+N +I +G +A ++F+ M
Sbjct: 311 AHLLFVETHLKDTVSYNVMICALARHGHGRDALQVFDEM 349
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 128/318 (40%), Gaps = 30/318 (9%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCE 88
+F M R+ +S+ ++ G++R+G A EL+ MP R +S N I+ Y +
Sbjct: 182 VFDRMVERDLISWNTLMMGYLRQGGAGVARELFEEMPDRNVNS--WNMAIAAYSQERSWA 239
Query: 89 EAARIFEAM----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP----EKNVVAWTAMV 140
+A +F M + D ++ + G + AR++ + E N +++
Sbjct: 240 DAVAVFNRMRLARFQPDPATMAVLMSACAQLGSLSVARQVHGILRKGCVEMNFHVLNSLI 299
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
D Y K LF+ ++++ ++ A R R+ +QV +S+
Sbjct: 300 DMYAKCGSISQAHLLFVETHLK----DTVSYNVMICALARHGHGRDALQVFDEMSKERLQ 355
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS-----WNSLISGYVHNGEIEEAYR 255
D + +++ G + + F M A+ + ++ Y G I+EAY
Sbjct: 356 PDAVTLLGVLSACAHAGLVHDGKFYFESMKTNYAIEQSPDHYACMVDLYGRAGLIKEAYE 415
Query: 256 LFERMPGKDFVS-WTTMITGFSSKGNLE----KSIELFNMMPEKDDVTWTAIISGFVNNE 310
L MP + W +I N+E + EL + P ++ T+ + + +
Sbjct: 416 LARAMPMEPHAGVWGALINACRKHCNVEVGKVAARELIAIEP-RNPGTYVLLANTLARGQ 474
Query: 311 QYEEAFRWFIEMLRKDVR 328
Q+E F+E + + +R
Sbjct: 475 QWE-----FVETVWQSMR 487
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 120/289 (41%), Gaps = 16/289 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N ++ + + A E+F MP RN S+ I + + + +A +
Sbjct: 186 MVERDLISWNTLMMGYLRQGGAGV-ARELFEEMPDRNVNSWNMAIAAYSQERSWADAVAV 244
Query: 61 YVNMP-ARWR-DSVCSNALISGYLKVGRCEEAARIF----EAMVEKDVVAWGSMVDGYCK 114
+ M AR++ D L+S ++G A ++ + VE + S++D Y K
Sbjct: 245 FNRMRLARFQPDPATMAVLMSACAQLGSLSVARQVHGILRKGCVEMNFHVLNSLIDMYAK 304
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + +A +F + K+ V++ M+ + D +F M + + +++TL +
Sbjct: 305 CGSISQAHLLFVETHLKDTVSYNVMICALARHGHGRDALQVFDEMSKERLQPDAVTLLGV 364
Query: 175 FEACGRFFRYREG-VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KR 232
AC +G + + + + ++ +YGR G + EA ++ M +
Sbjct: 365 LSACAHAGLVHDGKFYFESMKTNYAIEQSPDHYACMVDLYGRAGLIKEAYELARAMPMEP 424
Query: 233 DAVSWNSLISGYVHNGEIE-------EAYRLFERMPGKDFVSWTTMITG 274
A W +LI+ + +E E + R PG + T+ G
Sbjct: 425 HAGVWGALINACRKHCNVEVGKVAARELIAIEPRNPGTYVLLANTLARG 473
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/560 (30%), Positives = 289/560 (51%), Gaps = 71/560 (12%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V ++ + Y K E+A ++F+ M E+DV +W +++ Y + G+ P
Sbjct: 140 DVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ-----------P 188
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
EK +LF M+ G +S+TLT + +C R G +
Sbjct: 189 EK--------------------ALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKE 228
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + R GF D + ++++ MYG+ G ++ A +VF + +++ VSWNS+I+GY G+
Sbjct: 229 IHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGD 288
Query: 250 IEEAYRLFERMP--------------------------GK-------------DFVSWTT 270
+ LF RM GK D ++
Sbjct: 289 SKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSS 348
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I + GN+ + +F MP+ + V+W +ISG+V Y EA F +M + V+P+
Sbjct: 349 LIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPD 408
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+T +SVL A + A L +G +IH +++ +E + + +L+ +Y+KCG V +A IF
Sbjct: 409 AITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFN 468
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ ER+ VS+ SMI+ + +G EAL LF KM+ P+++TFL++LSAC+H GLV+E
Sbjct: 469 QLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDE 528
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN-SMTFEPPPGVWGALLGA 509
G YF M Y +P EHY+C++D+LGR G L EA +++ + G+ L A
Sbjct: 529 GCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSA 588
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
H LDL + + L+E +PD + Y++LS++Y+ + K + +VR+K K ++K+P
Sbjct: 589 CHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNP 648
Query: 570 GCSWIILKDKVHLFLAGRKS 589
GCSWI + ++H F+ KS
Sbjct: 649 GCSWIEVGKRIHPFVVEDKS 668
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 248/522 (47%), Gaps = 62/522 (11%)
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
S+ + S YLK G+ +I ++ ++ S+++ Y A+ +F +
Sbjct: 8 SLLKTCIDSKYLKQGKLIHQ-KIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIEN 66
Query: 131 K-NVVAWTAMVDGYMKVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACGRFFRYREGV 188
++ W ++ K F +G ++F + + ++ T + +AC R G
Sbjct: 67 PLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGK 126
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
VH V + GF D+++ +S + MY + ++A K+F M +RD SWN++IS Y +G
Sbjct: 127 MVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDG 186
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMIT--------------------------GFSSK 278
+ E+A LFE M F V+ TT+I+ GF S
Sbjct: 187 QPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSS 246
Query: 279 ---------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
G LE + E+F + K+ V+W ++I+G+ + F M + +RP
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 306
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
TLSS+L A + + L G IH ++++ +E+D+ + +SL+ LY KCGN+ A +F
Sbjct: 307 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 366
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
N+ + N+VS+N MISG+ + G EAL +F M+ G+ P+ ITF SVL AC+ + ++E
Sbjct: 367 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 426
Query: 450 EGFIYFKSMKTLYN------IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
+G K ++N +E ++D+ + G++ EA+ + N + E W
Sbjct: 427 KG-------KEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSW 478
Query: 504 GALLGA----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
+++ A G+ L L + Q + +PD T +LS
Sbjct: 479 TSMIAAYGSHGQAFEALKLFEKMQQS--DAKPDKVTFLAILS 518
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 197/417 (47%), Gaps = 47/417 (11%)
Query: 20 NCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNA 76
C+++E A ++F MP R+ S+ +I+ + + G +A EL+ M DSV
Sbjct: 153 KCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTT 212
Query: 77 LISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
+IS ++ E I +V D ++VD Y K G + A+E+F+++ KN
Sbjct: 213 VISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKN 272
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VV+W +M+ GY + +LF M G+ TL+ + AC R + G +HG
Sbjct: 273 VVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHG 332
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ R + DI + +S+I +Y + G + A VF M K + VSWN +ISGYV G E
Sbjct: 333 YIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLE 392
Query: 253 AYRLFERM----PGKDFVSWTTMITGFSSKGNLEK------------------------- 283
A +F M D +++T+++ S LEK
Sbjct: 393 ALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLD 452
Query: 284 ----------SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ +FN +PE+D V+WT++I+ + ++ Q EA + F +M + D +P+++T
Sbjct: 453 MYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVT 512
Query: 334 LSSVLSASAATATLNQGS-QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
++LSA + +++G + + + + V + L+ L + G + +AY I
Sbjct: 513 FLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEIL 569
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 181/363 (49%), Gaps = 30/363 (8%)
Query: 14 TALIN--NNCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA---R 67
+AL++ C E A E+F + +N VS+ +MI G+ +G EL+ M R
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 305
Query: 68 WRDSVCSNALI----SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
+ S+ L+ S L++G+ I VE D+ S++D Y K G + A
Sbjct: 306 PTLTTLSSILMACSRSVNLQLGKFIHG-YIIRNRVEADIFVNSSLIDLYFKCGNIGSAEN 364
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F MP+ NVV+W M+ GY+KV + + +F MR+ G+ ++IT T + AC +
Sbjct: 365 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 424
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
+G ++H + + + ++ +++ MY + G +DEA +F+ + +RD VSW S+I+
Sbjct: 425 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 484
Query: 244 YVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM-------P 292
Y +G+ EA +LFE+M D V++ +++ S G +++ FN M P
Sbjct: 485 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 544
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK--DVRPNQLTLSSVLSASAATATLNQG 350
+ + + G V + EA+ E+L++ D+R + LS++ SA L+ G
Sbjct: 545 AVEHYSCLIDLLGRVG--RLREAY----EILQRTPDIREDVGLLSTLFSACHLHKKLDLG 598
Query: 351 SQI 353
QI
Sbjct: 599 EQI 601
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 13/233 (5%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L S+L + L QG IH +V + +++++++ SL++LY C A +F I+
Sbjct: 6 LLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIE 65
Query: 394 ER-NIVSYNSMISGFAQNGLGEEALNLF-RKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+I +N +++ +N + E L +F R + L P+ T+ SVL AC+ +G V G
Sbjct: 66 NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 125
Query: 452 -FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA- 509
++ +K+ + ++ A V + + +AI L + M E W ++
Sbjct: 126 KMVHTHVIKSGFAMDVVVMSSA--VGMYAKCNVFEDAIKLFDEMP-ERDVASWNNVISCY 182
Query: 510 ---GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
G+ L+L + +PDS T V+S ++ +R G + M+
Sbjct: 183 YQDGQPEKALEL--FEEMKVSGFKPDSVTLTTVISSCARLLDLER-GKEIHME 232
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 301/557 (54%), Gaps = 47/557 (8%)
Query: 94 FEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
F+ M+ D++ Y K GR+ A ++FD+M ++NVV+WTA++ G+++ +
Sbjct: 5 FDLMLSNDLIVM------YGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESL 58
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
LF M G+ N T + +ACG G Q+H + + GFD ++GNSII MY
Sbjct: 59 LLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMY 118
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------- 260
+ G ++EA +F +M R+ +SWN++I+GY G E+A LF++M
Sbjct: 119 SKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFT 178
Query: 261 -----------------------PGKDFVSWTTMITG-----FSSKGNLEKSIELFNMMP 292
G S T + G + G L + +F+ +
Sbjct: 179 STLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIE 238
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
EK ++WTA+I G+ E+ F ++ ++ + LSS++ A A + QG Q
Sbjct: 239 EKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQ 298
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+HA +K+ D+S+ NS++ +Y KCG + +A R+F+ + RN++S+ MI+G+ ++GL
Sbjct: 299 MHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGL 358
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
G+EA+ LF +M+ + P+ +T+L+VL C+H GLVE+G YF + + + I+ EHYA
Sbjct: 359 GKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYA 418
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
CMVD+LGRAG L EA +L++SM E G+W LL A R H +L+L K L+ L+ +
Sbjct: 419 CMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSE 478
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLD 592
+ YV++S++Y+ G ++ R+R K K+++K G SW+ + +VH F G +
Sbjct: 479 NPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPL 538
Query: 593 LKEIEVTLQTISKGTKE 609
++I L+ + + KE
Sbjct: 539 TEKIHEILKEMERRMKE 555
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 186/391 (47%), Gaps = 55/391 (14%)
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
GF +D++L N +I MYG+ G + A VF M KR+ VSW +L+ G++ NG E+ LF
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 258 ERM-------------------------------------PGKDFVS--WTTMITGFSSK 278
+M G D V+ ++I +S
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G + ++ +F +MP ++ ++W A+I+G+ E+A F +M ++ T +S L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 339 SASAATATLNQGSQIHAHVVKMNM--ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
A + + +G+QIHA ++ + ++ +L+ LY KCG + A R+F++I+E++
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
++S+ ++I G+AQ G E++ LFR++++ + + S++ LV++G K
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQG----K 297
Query: 457 SMKTL-YNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALL-GAG 510
M + G + C ++D+ + G + EA L + M P V W ++ G G
Sbjct: 298 QMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEM---PARNVISWTVMITGYG 354
Query: 511 RTHLNLDLAKLAAQ-HLMELEPDSATPYVVL 540
+ L + +L + L EPD T VL
Sbjct: 355 KHGLGKEAIRLFDEMQLDSTEPDDVTYLAVL 385
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 206/459 (44%), Gaps = 64/459 (13%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--------WRDSVCSNAL 77
A ++F M RN VS+ A++ G ++ G E+ L+ M + ++ + L
Sbjct: 26 ACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGL 85
Query: 78 ISGYLKVGRCEEAARIFEAMVEKDV----VAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
++G L +GR +I + V+ V S++D Y K GR+ EA +F+ MP +N+
Sbjct: 86 LNG-LDIGR-----QIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNL 139
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++W AM+ GY E LF M+ G + T T +AC +EG Q+H
Sbjct: 140 ISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAF 199
Query: 194 VSRFGFDYDI--ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ GF Y + + ++I +Y + G + A +VFS + ++ +SW +LI GY G +
Sbjct: 200 LITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLA 259
Query: 252 EAYRLFERM---------------------------------------PGKDFVSWTTMI 272
E+ LF ++ G D +++
Sbjct: 260 ESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSIL 319
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
+ G + ++ LF+ MP ++ ++WT +I+G+ + +EA R F EM P+ +
Sbjct: 320 DMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDV 379
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T +VL + + + +G + + + + +++ V +V L + G + +A + +
Sbjct: 380 TYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDS 439
Query: 392 ID-ERNIVSYNSMISGFAQNG---LGEEALNLFRKMKDE 426
+ E N+ + +++S +G LG+E + ++ E
Sbjct: 440 MPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSE 478
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 141/281 (50%), Gaps = 12/281 (4%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP--ARWRDSVCSNALISG 80
I EA +F MP+RN +S+ AMI G+ G +A L+ M + D + +
Sbjct: 124 INEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKA 183
Query: 81 YLKVGRCEEAARIFEAMVEK------DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+G +E +I ++ + G+++D Y K G++ AR +F + EK+V+
Sbjct: 184 CSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVI 243
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WTA++ GY + + +LF +R + + L+ + F ++G Q+H
Sbjct: 244 SWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFA 303
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ DI + NSI+ MY + G ++EA ++FS M R+ +SW +I+GY +G +EA
Sbjct: 304 IKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAI 363
Query: 255 RLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
RLF+ M D V++ ++ G S G +EK E F+ +
Sbjct: 364 RLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRL 404
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
M D+ + N L+ +Y KCG + A +F + +RN+VS+ +++ G QNG E+L L
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 420 FRKMKDEGLVPNQITFLSVLSAC 442
F KM G+ PN TF + L AC
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKAC 83
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--VNMPARWRDSVCSNALISG 80
I EA +F+ MP RN +S+ MITG+ + G+ EA L+ + + + D V A++ G
Sbjct: 328 INEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLG 387
Query: 81 YLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNVV 134
G E+ F + ++ V + MVD + GR+ EA+ + D MP E NV
Sbjct: 388 CSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVG 447
Query: 135 AWTAMV 140
W ++
Sbjct: 448 IWQTLL 453
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 318/610 (52%), Gaps = 53/610 (8%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN--ALISGYL 82
+A +F MP R+ VS+ ++++ F+ MF +A + ++M R V N +L+S
Sbjct: 129 DARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSM---MRSGVPVNVASLVSVVP 185
Query: 83 KVGRCEEAA-------RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
G +E + + ++ V ++VD Y K G V + ++F+ MPE+N V+
Sbjct: 186 ACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVS 245
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W + + ++ + D LF M G SITL+ L A + G +VHG
Sbjct: 246 WNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSI 305
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ + DI + NS++ MY + G +++A VF + R+ VSWN++I+ V NG EA+
Sbjct: 306 KRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFG 365
Query: 256 LFERM--------------------------PGKDFVSWT-------------TMITGFS 276
L +M GK +W+ +I ++
Sbjct: 366 LVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYA 425
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G L + +F++ EKDDV++ +I G+ + E+ F ++ + + ++
Sbjct: 426 KCGQLRLAQSIFDL-SEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMG 484
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
L+A ++ QG +IH +V+ + + + N+L+ LY+K G + A +IF I E++
Sbjct: 485 ALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKD 544
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+ S+N+MI G+ +G + A +LF MKD G+ + +++++VLS C+H GLVE G YF
Sbjct: 545 VASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFS 604
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
M N+EP HYACMVD+LGR+G L E++++I M F VWGALLGA R H N+
Sbjct: 605 HMLA-QNLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNI 663
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+LA+ AA HL EL+P+ + Y VL ++Y+ G+ + +++R K ++++K+P SW+
Sbjct: 664 ELAQYAADHLFELKPEHSGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQKNPAYSWVQS 723
Query: 577 KDKVHLFLAG 586
+K+ FL G
Sbjct: 724 GNKLQAFLVG 733
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/508 (27%), Positives = 240/508 (47%), Gaps = 79/508 (15%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N L++ Y G +A R+F+ M +DVV+W S+V + + +KM
Sbjct: 110 DVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSF-----------LANKM- 157
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
F+D LSM R G+ N +L + ACG G+
Sbjct: 158 -------------------FDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLG 198
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHGLV + G D + LGN+++ MYG+ G ++ + KVF M +R+ VSWNS I +++ G
Sbjct: 199 VHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGL 258
Query: 250 IEEAYRLFERMPGKDFVSWTTMIT-------------------GFSSK------------ 278
+ LF M + F+ + ++ G+S K
Sbjct: 259 YGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANS 318
Query: 279 --------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
G+LEK+ +F + ++ V+W A+I+ V N EAF I+M + PN
Sbjct: 319 LVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPN 378
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+TL ++L A + A+L G QIHA ++ + D+ I N+L+ +Y+KCG + A IF
Sbjct: 379 SITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF- 437
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
++ E++ VSYN++I G++Q+ E+LNLF+++ G+ + I+F+ L+AC ++ ++
Sbjct: 438 DLSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQ 497
Query: 451 GF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G I+ ++ L + P + ++ + + G L A + N + E W ++
Sbjct: 498 GKEIHGVLVRRLLSNHPFLAN--TLLGLYTKGGMLDTASKIFNRIK-EKDVASWNNMIMG 554
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPY 537
H +D AA HL +L D Y
Sbjct: 555 YGMHGQID----AAFHLFDLMKDHGVTY 578
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 153/305 (50%), Gaps = 39/305 (12%)
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+G+++H R G D+ GN+++ Y G +A +VF M RD VSWNSL+S ++
Sbjct: 94 KGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFL 153
Query: 246 HNGEIEEAYR-LFERMPGKDFVSWTTMI------------------------TGFSSK-- 278
N ++A + L M V+ +++ TG S
Sbjct: 154 ANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVN 213
Query: 279 ------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
G++E S+++F MPE+++V+W + I F+N Y + F M +
Sbjct: 214 LGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERG 273
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
P +TLSS+L A + G ++H + +K ME D+ + NSLV +Y+K G++ A
Sbjct: 274 FMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKAC 333
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+F I+ RN+VS+N+MI+ QNG EA L KM+ +G PN IT +++L AC+ +
Sbjct: 334 AVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMA 393
Query: 447 LVEEG 451
++ G
Sbjct: 394 SLKTG 398
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 185/397 (46%), Gaps = 33/397 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ +A +F + +RN VS+ AMI V+ G EA L + M +D C N++
Sbjct: 328 SLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQ---KDGECPNSIT--- 381
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWG-------------SMVDGYCKKGRVIEAREIFDKM 128
V +R+ K + AW +++D Y K G++ A+ IFD +
Sbjct: 382 -LVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-L 439
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
EK+ V++ ++ GY + + +LF + G+ +++I+ AC +++G
Sbjct: 440 SEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGK 499
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++HG++ R L N+++ +Y + G +D A+K+F+ + ++D SWN++I GY +G
Sbjct: 500 EIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHG 559
Query: 249 EIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM----PEKDDVTWT 300
+I+ A+ LF+ M D VS+ +++ S G +E+ + F+ M E + +
Sbjct: 560 QIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYA 619
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
++ + Q E+ ++M N ++L A + H+ ++
Sbjct: 620 CMVDLLGRSGQLTESVEIILDM---PFHANSDVWGALLGACRIHGNIELAQYAADHLFEL 676
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
E + L ++Y++ G +A++I T + R +
Sbjct: 677 KPEHS-GYYSVLRNMYAEAGRWNEAHKIRTLMKSRKV 712
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 13/188 (6%)
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN--QGSQIHAHVVKMNMESDVSIQNS 371
EA + MLR V P+ T L A+AA A + +G ++HA ++ +DV N+
Sbjct: 57 EALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNT 116
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
LV+ Y+ CG+ DA R+F + R++VS+NS++S F N + ++A M G+ N
Sbjct: 117 LVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVN 176
Query: 432 QITFLSVLSAC-----NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+ +SV+ AC GL G + + ++ N+ +VD+ G+ G +
Sbjct: 177 VASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGN------ALVDMYGKFGHVEA 230
Query: 487 AIDLINSM 494
++ + M
Sbjct: 231 SMKVFEGM 238
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/649 (29%), Positives = 333/649 (51%), Gaps = 53/649 (8%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP--ARWRDSVCSNALISGYLKVG 85
++F M RN V++ +I+G+ R M E L++ M +S A + + G
Sbjct: 149 KVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Query: 86 RCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
++ +V +K + S+++ Y K G V +AR +FDK K+VV W +M+
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY + +F SMR + + + + + C R Q+H V ++GF +
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
D + +++ Y + M +A ++F + + VSW ++ISG++ N EEA LF M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 261 PGKDF-----------------------------------VSWTTMITGFSSKGNLEKSI 285
K T ++ + G +E++
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT- 344
++F+ + +KD V W+A+++G+ + E A + F E+ + ++PN+ T SS+L+ AAT
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
A++ QG Q H +K ++S + + ++L+++Y+K GN+ A +F E+++VS+NSMI
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
SG+AQ+G +AL++F++MK + + +TF+ V +AC H GLVEEG YF M I
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
P EH +CMVD+ RAG L +A+ +I +M +W +L A R H +L +LAA+
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAE 688
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
++ ++P+ + YV+LS++Y+ G ++ +VR + ++K PG SWI +K+K + FL
Sbjct: 689 KIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFL 748
Query: 585 AGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLERDWSYTADNI 633
AG +S +I + L+ +S K+ LG E D SY +I
Sbjct: 749 AGDRSHPLKDQIYMKLEDLSTRLKD----------LGYEPDTSYVLQDI 787
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 231/468 (49%), Gaps = 54/468 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+Y A +F P R+ SY +++ GF R G EA+ L++N+ + CS + S L
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS--IFSSVL 100
Query: 83 KVGR--CEEA-ARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
KV C+E R K DV S+VD Y K + R++FD+M E+NVV
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
WT ++ GY + ++ LF+ M+ G NS T G+QVH +V
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G D I + NS+I +Y + G + +A +F + V+WNS+ISGY NG EA
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 255 RLFE-------RMPGKDFVS--------------------------------WTTMITGF 275
+F R+ F S T ++ +
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 276 SSKGNLEKSIELFNMMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
S + ++ LF + + V+WTA+ISGF+ N+ EEA F EM RK VRPN+ T
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S +L+A + S++HA VVK N E ++ +L+ Y K G V +A ++F+ ID+
Sbjct: 401 SVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 456
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
++IV++++M++G+AQ G E A+ +F ++ G+ PN+ TF S+L+ C
Sbjct: 457 KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 205/443 (46%), Gaps = 54/443 (12%)
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN--- 167
G R+ A +FDK P ++ ++ +++ G+ + ++ LFL++ R GM +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 168 -SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
S L + C F G Q+H +FGF D+ +G S++ Y + + KVF
Sbjct: 96 FSSVLKVSATLCDELF----GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--GKDFVSWT--------------- 269
M +R+ V+W +LISGY N +E LF RM G S+T
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 270 ----------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
++I + GN+ K+ LF+ K VTW ++ISG+
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EA F M VR ++ + +SV+ A L Q+H VVK D +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
I+ +L+ YSKC ++DA R+F I N+VS+ +MISGF QN EEA++LF +MK +
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G+ PN+ T+ +L+A + ++ ++ + +KT N E ++D + G + E
Sbjct: 392 GVRPNEFTYSVILTA---LPVISPSEVHAQVVKT--NYERSSTVGTALLDAYVKLGKVEE 446
Query: 487 AIDLINSMTFEPPPGVWGALLGA 509
A + + + + W A+L
Sbjct: 447 AAKVFSGID-DKDIVAWSAMLAG 468
>gi|302764988|ref|XP_002965915.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
gi|300166729|gb|EFJ33335.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
Length = 912
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 192/639 (30%), Positives = 330/639 (51%), Gaps = 78/639 (12%)
Query: 3 DRTSASYNAMITALINNNCSIYE----AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAE 58
DRT T +I C++ E A EIFA MP RNAVSY+ MI ++ +G EAE
Sbjct: 226 DRTPQQDIVSCTLMIKA-CAVQEILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAE 284
Query: 59 ELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFE-AMVEKDVVAWGSMVDGYCKKGR 117
L MP + D +++S Y + G EEA RIF+ A D V+W +++ Y + G
Sbjct: 285 NLSRRMPQQ--DPTLWTSMLSAYSRHGLVEEARRIFDRAARRDDEVSWNALLSAYAQAGH 342
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ AR F++MP +VVAWTA++
Sbjct: 343 LHLARSTFERMPRHDVVAWTALI-----------------------------------AV 367
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
G+ + E ++ L+ + D++ ++I YG G + E+ +V+++M +R+ VS
Sbjct: 368 SGQNGQLEEAEVLYDLIP----ERDLVAWTALIQAYGVNGKLTESKRVYALMPERNRVSH 423
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
++I Y NGE+ +A ++ + +P D + T+MI ++ G ++ + E+F+ + D +
Sbjct: 424 TAMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPDVI 483
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI---- 353
A++ + + + + A F + +K + ++ +++++A A L++ I
Sbjct: 484 ACNAMMEAYSSAQMLDHAKAMFDSIKQKTL----VSWNTMVAAYAQAGNLDEAKSIFDSI 539
Query: 354 -HAHVVKMNM----------------------ESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
H +VV N+ E D ++V++ ++ G + +A +F
Sbjct: 540 PHKNVVSHNVMIVAYAHNMDLAEARRIFYSMDEKDTVTWTAMVAMVAQHGRLAEAQELFA 599
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ RN+VS+NS+I+G A G G A+ M++EG P+ ITF+ +L AC+HVGLVEE
Sbjct: 600 KMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEE 659
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G+ +F SM+ + + P EHY MVD+LGRAG L A +L+ +M F P G WG+LLG+
Sbjct: 660 GWTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSC 719
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
+TH ++ L AA+ L++ + S+ PYV+L+++YS +G+ D VR + K + ++K PG
Sbjct: 720 KTHSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNRMKARGVKKQPG 779
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
S I + +H F+AG S +EI L + + K+
Sbjct: 780 VSLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMKK 818
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/512 (24%), Positives = 226/512 (44%), Gaps = 95/512 (18%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N +I Y K R ++A +F + E +V + ++ Y + G + A+ IFD++P NVV
Sbjct: 51 NLIIQMYGKCSRIDDAQAVFNELPEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNVV 110
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRR-GGMAFNSITLTI-----LFEACGRFFRYREGV 188
+W +++ G+ + + ++F M R ++NS+ L A F R E
Sbjct: 111 SWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWNSMITGYAQSGDLASATAMFDRTPE-- 168
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+++I N++IT Y + EA VF RD +SWN++++ Y +G
Sbjct: 169 ------------HNVISWNALITGYSDNRMIPEAKGVFDRAPGRDKISWNAMLTAYAQSG 216
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT---------- 298
+++ A +F+R P +D VS T MI + + L ++E+F MP+++ V+
Sbjct: 217 DLDSAKEVFDRTPQQDIVSCTLMIKACAVQEILGHAVEIFAAMPDRNAVSYSFMIQIYID 276
Query: 299 ---------------------WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
WT+++S + + EEA R F R+D ++++ +++
Sbjct: 277 QGKIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVEEARRIFDRAARRD---DEVSWNAL 333
Query: 338 LSASAATATLN-------------------------QGSQIHAHVVKMNM--ESDVSIQN 370
LSA A L+ Q Q+ V ++ E D+
Sbjct: 334 LSAYAQAGHLHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLYDLIPERDLVAWT 393
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+ Y G + ++ R++ + ERN VS+ +MI ++QNG +A RKM D P
Sbjct: 394 ALIQAYGVNGKLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQA----RKMLDTLPDP 449
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAI 488
+Q T S++ A G +++ F S+K P+ AC M++ A L A
Sbjct: 450 DQSTRTSMIVAYAQNGYIKDAREMFDSIKN-------PDVIACNAMMEAYSSAQMLDHAK 502
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
+ +S+ + W ++ A NLD AK
Sbjct: 503 AMFDSIK-QKTLVSWNTMVAAYAQAGNLDEAK 533
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 186/424 (43%), Gaps = 63/424 (14%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
L +CG +G ++H ++ ++ L N II MYG+ +D+A VF+ +
Sbjct: 14 ALATAIRSCGIAKDLAQGRKIHNQIADGEHRGNLFLQNLIIQMYGKCSRIDDAQAVFNEL 73
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFS------------- 276
+ + S L+ Y NG++ A +F+++P + VSW ++I GFS
Sbjct: 74 PEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFA 133
Query: 277 ------------------SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
G+L + +F+ PE + ++W A+I+G+ +N EA
Sbjct: 134 RMPRWSSSSWNSMITGYAQSGDLASATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGV 193
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F +D +++ +++L+A A + L+ ++ + ++ S ++ ++
Sbjct: 194 FDRAPGRD----KISWNAMLTAYAQSGDLDSAKEVFDRTPQQDIVS-CTLMIKACAVQEI 248
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
G+ V+ IF + +RN VSY+ MI + G EA NL R+M + + + S+
Sbjct: 249 LGHAVE---IFAAMPDRNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQ----DPTLWTSM 301
Query: 439 LSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
LSA + GLVEE I+ ++ + + + ++ +AG L A TFE
Sbjct: 302 LSAYSRHGLVEEARRIFDRAARRDDEVS-----WNALLSAYAQAGHLHLA-----RSTFE 351
Query: 498 PPPG----VWGALLGAGRTHLNLDLAKLAAQHLMELEPD-SATPYVVLSDLYSVIGKKRD 552
P W AL+ + L+ A++ L +L P+ + L Y V GK +
Sbjct: 352 RMPRHDVVAWTALIAVSGQNGQLEEAEV----LYDLIPERDLVAWTALIQAYGVNGKLTE 407
Query: 553 GNRV 556
RV
Sbjct: 408 SKRV 411
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 31/135 (22%)
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+ +L+ VR Q L++ + + L QG +IH + ++ +QN ++ +Y KC
Sbjct: 1 MSLLKTQVRELQNALATAIRSCGIAKDLAQGRKIHNQIADGEHRGNLFLQNLIIQMYGKC 60
Query: 380 GNVVDAYRIFTNIDE-------------------------------RNIVSYNSMISGFA 408
+ DA +F + E N+VS+NS+I+GF+
Sbjct: 61 SRIDDAQAVFNELPEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFS 120
Query: 409 QNGLGEEALNLFRKM 423
Q+G A +F +M
Sbjct: 121 QHGFMSNADEIFARM 135
>gi|347954460|gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
Length = 820
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 319/597 (53%), Gaps = 24/597 (4%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVC--SNA 76
+A ++F +P RN V++ A++ G+V+ GM EA L +M P R S C ++A
Sbjct: 215 DARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLSASA 274
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
++G + +C A + +E D + S+++ YCK G + A IFD+M EK+VV W
Sbjct: 275 NMAGVEEGTQCHAIAIV--NGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFEKDVVTW 332
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
++ GY++ ED + MR + ++ +TL L A R + G +V R
Sbjct: 333 NLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCXCFR 392
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
+ DI+L ++ + MY + G + +A KVF ++D + WN+L++ Y +G EA RL
Sbjct: 393 HSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSGEALRL 452
Query: 257 F-----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFV 307
F E +P + ++W +I + ++ E+F M + ++WT +++G V
Sbjct: 453 FYEMQLESVP-PNVITWNLIILSRLRNAEVNEAKEMFLQMQSSGITPNLISWTTMMNGMV 511
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDV 366
N EEA + +M +RPN +++ LSASA A+ + G IH ++++ + S
Sbjct: 512 QNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLASXHFGRSIHGYIIRNLRHSSSA 571
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
SI+ SLV +Y+KCG++ A R+F + + YN+MIS +A G EA+ L+R ++D
Sbjct: 572 SIETSLVDMYAKCGDINKAERVFESKLSNELPLYNAMISAYALXGNVTEAVALYRSLEDM 631
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G P+ ITF S+LSACNH G +++ F M + + ++P EHY +VD+ A +
Sbjct: 632 GXKPDSITFTSLLSACNHAGDIDQAIRVFTDMVSNHGVKPCLEHYGLLVDLFASAKETDK 691
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A+ L+ M ++P + +L+ + +L ++ L+E EP+ + YV +S+ Y+V
Sbjct: 692 ALRLMEEMPYKPDXRMIQSLVASCNKQHKTELVDYLSRQLLETEPEXSGNYVTISNAYAV 751
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILK---DKVHLFLAGRKSCLDLKEIEVTL 600
G + + R K K ++K PGCSWI +K + VH+F+A K+ + EI+ L
Sbjct: 752 EGSWDEVVKTREMMKAKGLKKKPGCSWIQIKGEEEGVHVFVANDKTHVRNDEIQRIL 808
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/530 (26%), Positives = 254/530 (47%), Gaps = 66/530 (12%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+S SY +++L N I EA + M RN + I G + +G YE
Sbjct: 23 SSTSYFHRVSSLCKNG-EIKEALSLVTEMDFRN-LRIGPEIYGEILQGCVYE-------- 72
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
RD + + LK G + AR +E +V + Y K + A +
Sbjct: 73 ----RDLCTGKQIHARILKNG--DLYAR--NEYIETKLVIF------YAKCDDLEIAEVL 118
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F K+ +NV +W A++ ++ E F+ M + ++ + +F+ACG
Sbjct: 119 FSKLRVRNVFSWAAIIGVKCRMGLCEGALMGFVEMLENEIFPDNFVVPNVFKACGALQWS 178
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R G VHG V + G + + + +S+ MYG+ G +D+A KVF + +R+ V+WN+L+ GY
Sbjct: 179 RFGRGVHGYVLKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGY 238
Query: 245 VHNGEIEEAYRLFERM------PGK---------------------------------DF 265
V NG EEA RL M P + D
Sbjct: 239 VQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLELDN 298
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ T+++ + G +E + +F+ M EKD VTW +ISG+V E+A M +
Sbjct: 299 ILGTSLLNFYCKVGLIEYAEMIFDRMFEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLE 358
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++ + +TL++++SA+A T L G ++ + ++ESD+ + ++ + +Y+KCG++VDA
Sbjct: 359 KLKYDCVTLATLMSAAARTENLKLGKEVQCXCFRHSLESDIVLASTAMDMYAKCGSIVDA 418
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF-LSVLSACNH 444
++F + E++++ +N++++ +A++G EAL LF +M+ E + PN IT+ L +LS +
Sbjct: 419 KKVFDSTVEKDLILWNTLLAAYAESGHSGEALRLFYEMQLESVPPNVITWNLIILSRLRN 478
Query: 445 VGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ E ++ + + I P + M++ + + G EAI + M
Sbjct: 479 AEVNEAKEMFLQMQSS--GITPNLISWTTMMNGMVQNGCSEEAIHFLRKM 526
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 143/576 (24%), Positives = 255/576 (44%), Gaps = 94/576 (16%)
Query: 21 CSIYEAFEI-FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS 79
C E E+ F+ + +RN S+AA+I R G+ A +V M + N ++
Sbjct: 109 CDDLEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLCEGALMGFVEMLEN--EIFPDNFVVP 166
Query: 80 GYLKVGRCEEAAR--------IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
K + +R + +A +E V S+ D Y K G + +AR++FD++PE+
Sbjct: 167 NVFKACGALQWSRFGRGVHGYVLKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPER 226
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
NVVAW A++ GY++ E+ L MR+ G+ +T++ A EG Q H
Sbjct: 227 NVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLSASANMAGVEEGTQCH 286
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ G + D ILG S++ Y ++G ++ A +F M ++D V+WN LISGYV G +E
Sbjct: 287 AIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFEKDVVTWNLLISGYVQQGLVE 346
Query: 252 EAYRLFERMP--------------------------GK-------------DFVSWTTMI 272
+A + + M GK D V +T +
Sbjct: 347 DAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCXCFRHSLESDIVLASTAM 406
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++ G++ + ++F+ EKD + W +++ + + EA R F EM + V PN +
Sbjct: 407 DMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSGEALRLFYEMQLESVPPNVI 466
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T + ++ + A +N+ ++ + +Q+S ++
Sbjct: 467 TWNLIILSRLRNAEVNEAKEMF-----------LQMQSSGIT------------------ 497
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS-----ACNHVGL 447
N++S+ +M++G QNG EEA++ RKM++ G+ PN + LS A H G
Sbjct: 498 --PNLISWTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLASXHFGR 555
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
G+I ++ L + + +VD+ + G + +A + S P ++ A++
Sbjct: 556 SIHGYI----IRNLRHSSSASIETS-LVDMYAKCGDINKAERVFESKLSNELP-LYNAMI 609
Query: 508 GAGRTHLNLDLAKLAAQHL--MELEPDSATPYVVLS 541
A N+ A + L M +PDS T +LS
Sbjct: 610 SAYALXGNVTEAVALYRSLEDMGXKPDSITFTSLLS 645
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 177/509 (34%), Positives = 267/509 (52%), Gaps = 39/509 (7%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
YC G I+ +++FD+M KN+V+W ++ Y K E LF M+ G+ NS
Sbjct: 132 YCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVY 191
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
L ++C G Q+H V R + +I + +I MY R G+++ A VF M
Sbjct: 192 MSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDA 251
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMP--------------------------GKDF 265
++AV+W L+ GY ++E A LF RM GK
Sbjct: 252 QNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQI 311
Query: 266 ------------VSWTTMITGFSSK-GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
VS T + F K G++E + F + E +DV+W+A+ISGF + +
Sbjct: 312 HSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRL 371
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
E+ + F + + V N +SV A AA A LN GSQ H +K + S + ++++
Sbjct: 372 EDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAM 431
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V++YSKCG + A R F +IDE + V++ ++ISG+A +G EAL FR+M+ G+ PN
Sbjct: 432 VTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNA 491
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
+TF++VL+AC+H GLV E Y SM Y ++P +HY CM+D RAG L EA++LIN
Sbjct: 492 VTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELIN 551
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRD 552
M FEP W +LLG H +L L K+AA++L L+P Y++L +LYS GK +
Sbjct: 552 RMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEE 611
Query: 553 GNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
VR + ++K CSWI +K +VH
Sbjct: 612 AGHVRKLMAERELKKEVSCSWISVKGQVH 640
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 178/410 (43%), Gaps = 49/410 (11%)
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
++ D M ++ + LFEACG+ +G +H + R + + N
Sbjct: 68 LKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENC 127
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------- 261
++ MY G + KVF M ++ VSW +IS Y NGE+E+A RLF M
Sbjct: 128 LLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187
Query: 262 ------------GKDFVSW--------------------TTMITGFSSKGNLEKSIELFN 289
G F+ T + + G LE + +F+
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
M ++ VTWT ++ G+ ++ E A F M + V ++ S VL +
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDM 307
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G QIH+H+VK+ ES+VS+ LV Y KCG++ AYR F I E N VS++++ISGF+Q
Sbjct: 308 GKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+G E+ + +F ++ EG+V N + SV AC + + S I+ G
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQAC-----AAQANLNMGSQAHGDAIKRGLV 422
Query: 470 HY----ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
Y + MV + + G L A S+ EP W A++ H N
Sbjct: 423 SYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 215/486 (44%), Gaps = 83/486 (17%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALISG 80
++F M M+N VS+ +I+ + + G +A L+ +M A S+ + L
Sbjct: 143 KVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPS 202
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
+L++G+ + + + A + ++ ++ + Y + G + A+ +FD M +N V WT ++
Sbjct: 203 FLELGK-QMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLM 261
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY + E +LF M G+ + +I+ + C + G Q+H + + G +
Sbjct: 262 VGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXE 321
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
++ +G ++ Y + G ++ A + F +S+ + VSW++LISG+ +G +E+ ++F +
Sbjct: 322 SEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSL 381
Query: 261 PG-----------------------------------KDFVSW----TTMITGFSSKGNL 281
+ VS+ + M+T +S G L
Sbjct: 382 RSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRL 441
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ + F + E D V WTAIISG+ + EA +F M VRPN +T +VL+A
Sbjct: 442 DYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTAC 501
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
+ + + + Q G++ Y + ID Y+
Sbjct: 502 SHSGLVAEAKQY-------------------------LGSMSRDYGVKPTIDH-----YD 531
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
MI +++ GL EAL L +M E P+ +++ S+L C ++ G I + + L
Sbjct: 532 CMIDTYSRAGLLXEALELINRMPFE---PDAMSWKSLLGGCWAHCDLKLGKI---AAENL 585
Query: 462 YNIEPG 467
+ ++PG
Sbjct: 586 FRLDPG 591
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%)
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+ +EA + EM DV + + A +L G IH + + SI+N
Sbjct: 67 KLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIEN 126
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
L+ +Y CG+ +D ++F + +N+VS+ +IS +A+NG E+A+ LF M+ G+ P
Sbjct: 127 CLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRP 186
Query: 431 NQITFLSVLSACNHVGLVEEG 451
N ++S+L +C +E G
Sbjct: 187 NSAVYMSLLQSCLGPSFLELG 207
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 283/497 (56%), Gaps = 43/497 (8%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR---RGGM 164
++ Y + G + AR++FD+MP ++ V++ +M+DGY+K + +LF SM + +
Sbjct: 166 LIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLI 225
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
++NS+ G F + ++G+ + A +
Sbjct: 226 SWNSML--------GGFAQTKDGIGL-------------------------------ALE 246
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKS 284
+F M +RD VSWN++I G+ G IE A+ LF RMP +D +SW+ MI G++ G+++ +
Sbjct: 247 LFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVA 306
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAA 343
LF+ MP+KD V + I++G+ N Y EA F EM R+ ++ P++ TL LSA +
Sbjct: 307 RTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQ 366
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+ + + +H + ++ + + +L+ +YSKCG++ +A IF +D++ I +N+M
Sbjct: 367 LGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAM 426
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
ISG A+NGLG+ A + +M + P+ ITF+ VL+AC H GLV+EG I F+ M+ ++
Sbjct: 427 ISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHK 486
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
+EP +HY CMVDILG+AG + A+ I M EP +W LL A + H N + +L A
Sbjct: 487 LEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGELIA 546
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+HLM ++ +++ YV+LS++Y+ +G ++VRM K + + K PGCSWI L+ VH F
Sbjct: 547 KHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIELEGVVHEF 606
Query: 584 LAGRKSCLDLKEIEVTL 600
L KS + EI L
Sbjct: 607 LVRDKSHPYVSEIYSVL 623
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 201/411 (48%), Gaps = 22/411 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPM--RNAVSYAAMITGFVR-RGMFYEA 57
M + S SYN+MI + + +I A E+F +MP+ +N +S+ +M+ GF + + A
Sbjct: 186 MPIQDSVSYNSMIDGYVKSG-TIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLA 244
Query: 58 EELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
EL+ MP R D V N +I G+ K GR E A +F M ++DV++W +M+DGY K G
Sbjct: 245 LELFEKMPER--DLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGD 302
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFE 176
+ AR +FD+MP+K+VVA+ ++ GY + + + ++F M R+ ++ + TL +
Sbjct: 303 IKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALS 362
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
A + + +H G + ++I MY + G ++ A +F + ++
Sbjct: 363 AISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDH 422
Query: 237 WNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
WN++ISG NG + A+ + M D +++ ++ + G +++ + F +M
Sbjct: 423 WNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMR 482
Query: 293 EKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
+ + + ++ E A ++ EM + PN + ++LSA
Sbjct: 483 KVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEM---PIEPNDIIWRTLLSACQNHENF 539
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRIFTNIDERNI 397
G I H+ M M+S S L+S +Y++ G A ++ + ++N+
Sbjct: 540 TIGELIAKHL--MTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNL 588
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%)
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+ D W A+I + + + A F ML ++ + S +L A A + +G Q
Sbjct: 87 DDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEGKQ 146
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
IH ++K+ + S++ + N L+++Y +CG++ A ++F + ++ VSYNSMI G+ ++G
Sbjct: 147 IHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGT 206
Query: 413 GEEALNLFRKMKDE 426
+ A LF M E
Sbjct: 207 IDLARELFDSMPLE 220
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 18/167 (10%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLV--SLYSKCGNVVD-----------AYRIFTNI 392
T N +Q+HA ++K + S+ ++ S+ S +V+ RI N
Sbjct: 26 TQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYAVQRIRRNH 85
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+ + +N++I ++ AL LF M + G ++ +F +L AC V LVEEG
Sbjct: 86 LDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEG- 144
Query: 453 IYFKSMKTLYNIEPGPEHYA--CMVDILGRAGSLAEAIDLINSMTFE 497
+ L +E G + C++ + R G + A + + M +
Sbjct: 145 --KQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQ 189
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/569 (31%), Positives = 298/569 (52%), Gaps = 45/569 (7%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
++ DV S+V+ Y K G ARE+F+ M ++++W +M+ + E+ +LF+
Sbjct: 935 LDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFI 994
Query: 158 SMRRGGMAFNSITLTILFEACGRF---FRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
+ G+ + TL + AC + VH L + G D + ++I +Y
Sbjct: 995 DLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHAL--KTGNIADSFVATTLIDVYS 1052
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTT 270
+ G M+EA +F D WN+++ GY+ + ++A LF + D ++ T
Sbjct: 1053 KSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLAT 1112
Query: 271 ---------------------MITGFSSK--------------GNLEKSIELFNMMPEKD 295
+ GF S G++ + +FN + D
Sbjct: 1113 AAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPD 1172
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
DV WT++ISG V+N ++A R + M + V P++ T ++++ AS+ L QG Q+HA
Sbjct: 1173 DVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHA 1232
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
+V+K++ SD + SLV +Y+KCGN+ DAYR+F ++ RNI +N+M+ G AQ+G EE
Sbjct: 1233 NVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEE 1292
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
A+NLF+ MK G+ P++++F+ +LSAC+H GL E + Y SM Y IEP EHY+C+V
Sbjct: 1293 AVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLV 1352
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D LGRAG + EA +I +M F+ + ALLGA R +++ K A L LEP +
Sbjct: 1353 DALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSA 1412
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
YV+LS++Y+ + D R K K ++K PG SWI +K+ +HLF+ +S
Sbjct: 1413 AYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADI 1472
Query: 596 IEVTLQTISKGTKEFDW-PKHDWSLLGLE 623
I ++ + K +E + P ++ LL +E
Sbjct: 1473 IYDKVEEMMKTIREDGYVPDTEFVLLDVE 1501
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 156/639 (24%), Positives = 285/639 (44%), Gaps = 105/639 (16%)
Query: 3 DRTSASYNAMITA----LINNNCSIYEAFEIF----ATMPMRNAVSYAAMITGFVRRGMF 54
+R ++NA++ A + +N+ + E +F A++ ++ A ++ + G
Sbjct: 684 ERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCL 743
Query: 55 YEAEELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
+ AE ++ + + W D S AL++ Y K GR +A +F+ M E+DVV W M+ G
Sbjct: 744 WAAEGVHGYAIKIGLEW-DVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKG 802
Query: 112 YCKKGRVIEAREIFDKM------PEKNVVA---------------WTA-MVDGY-MKVDC 148
Y + G EA ++F + P++ V W A V Y K+
Sbjct: 803 YVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSL 862
Query: 149 FEDGFDL----------------------FLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+D D+ F++M + ++++TL ++ A
Sbjct: 863 SDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLEL 922
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G QVHG+ + G D D+ + NS++ MY ++G A +VF+ M D +SWNS+IS
Sbjct: 923 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ 982
Query: 247 NGEIEEAYRLF-----ERMPGKDFV----------------------------------- 266
+ EE+ LF E + F
Sbjct: 983 SSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSF 1042
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
TT+I +S G +E++ LF + D W A++ G++ ++A F + +
Sbjct: 1043 VATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSG 1102
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+ +Q+TL++ A L+QG QIHAH +K +SD+ + + ++ +Y KCG++V+A
Sbjct: 1103 EKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAG 1162
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+F I + V++ SMISG NG ++AL ++ +M+ ++P++ TF +++ A + V
Sbjct: 1163 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT 1222
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
+E+G ++ L + P +VD+ + G++ +A L M +W A+
Sbjct: 1223 ALEQGRQLHANVIKLDCVSD-PFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAM 1280
Query: 507 LGAGRTHLN----LDLAKLAAQHLMELEPDSATPYVVLS 541
L H N ++L K H +EPD + +LS
Sbjct: 1281 LVGLAQHGNAEEAVNLFKSMKSH--GIEPDRVSFIGILS 1317
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 212/433 (48%), Gaps = 24/433 (5%)
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
A+ + L +G+C A RI + D +++ Y K G + AR++FD PE+++V
Sbjct: 631 AISTHNLLLGKCTHA-RIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVT 689
Query: 136 WTAMVDGYM-KVDC----FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
W A++ Y VD ++G LF +R + +TL + + C V
Sbjct: 690 WNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGV 749
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
HG + G ++D+ + +++ +Y + G M +A +F M +RD V WN ++ GYV G
Sbjct: 750 HGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLE 809
Query: 251 EEAYRLFERMPGK----DFVSWTTMITGFSS---------KGNLEKSIELFNMMPEKDDV 297
+EA++LF D S ++ G S ++ ++ + DV
Sbjct: 810 KEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDV 869
Query: 298 -TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
W +S + A F+ M ++ + +TL VL+A A T L G Q+H
Sbjct: 870 FCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGI 929
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
VK ++SDVS+ NSLV++YSK G A +F ++ +++S+NSMIS AQ+ L EE+
Sbjct: 930 AVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEES 989
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHV--GLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
+NLF + EGL P+ T SVL AC+ + GL I+ ++KT NI +
Sbjct: 990 VNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKT-GNIADSFV-ATTL 1047
Query: 475 VDILGRAGSLAEA 487
+D+ ++G + EA
Sbjct: 1048 IDVYSKSGKMEEA 1060
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 205/473 (43%), Gaps = 60/473 (12%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFV-----RRGMFYEAEELYVNMPARWRDS----- 71
S+ A ++F T P R+ V++ A++ + G E L+ + A +
Sbjct: 671 SLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTL 730
Query: 72 --VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
V L SG L I + +E DV G++V+ Y K GR+ +AR +FD M
Sbjct: 731 APVLKLCLNSGCLWAAEGVHGYAI-KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR 789
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E++VV W M+ GY+++ ++ F LF R G+ + ++ ++
Sbjct: 790 ERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNG------------ 837
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN----SLISGYV 245
VS +D L + + +L D+ VF K W I +V
Sbjct: 838 ----VSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFV 893
Query: 246 HNGEIEEAYR------LFERMPGKDFVSWTTMITGFSSKGNLEKSI-------------- 285
+ + Y + + G D + + G + K L+ +
Sbjct: 894 NMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG 953
Query: 286 ------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
E+FN M D ++W ++IS + EE+ FI++L + ++P+ TL+SVL
Sbjct: 954 CAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLR 1013
Query: 340 A-SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A S+ LN QIH H +K +D + +L+ +YSK G + +A +F N D+ ++
Sbjct: 1014 ACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLA 1073
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+N+M+ G+ G++AL LF + G +QIT + AC + L+++G
Sbjct: 1074 CWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQG 1126
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 199/447 (44%), Gaps = 54/447 (12%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
N+++ C+ Y A E+F M + +S+ +MI+ + + E+ L++++
Sbjct: 943 NSLVNMYSKMGCA-YFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGL 1001
Query: 65 -PARWRDS----VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
P + + CS +LI G L + R + + VA +++D Y K G++
Sbjct: 1002 KPDHFTLASVLRACS-SLIDG-LNISRQIHVHALKTGNIADSFVA-TTLIDVYSKSGKME 1058
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EA +F + ++ W AM+ GY+ + + +LF + + G + ITL +ACG
Sbjct: 1059 EAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACG 1118
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
+G Q+H + GFD D+ + + I+ MY + G M A VF+ +S D V+W S
Sbjct: 1119 CLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTS 1178
Query: 240 LISGYVHNGEIEEAYRLFER------MPGK-----------------------------D 264
+ISG V NG ++A R++ R MP + D
Sbjct: 1179 MISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLD 1238
Query: 265 FVS----WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
VS T+++ ++ GN+E + LF M ++ W A++ G + EEA F
Sbjct: 1239 CVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFK 1298
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQ-IHAHVVKMNMESDVSIQNSLVSLYSKC 379
M + P++++ +LSA + ++ + +H+ +E ++ + LV +
Sbjct: 1299 SMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRA 1358
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISG 406
G V +A ++ + + S N + G
Sbjct: 1359 GLVQEADKVIETMPFKASASINRALLG 1385
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 177/492 (35%), Positives = 270/492 (54%), Gaps = 27/492 (5%)
Query: 121 AREIFDKMPEKNVVAWTAMV-------DGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLT 172
AR +F +MPE N W ++ D +++ + LF +M G + N T
Sbjct: 71 ARAVFRQMPEPNCFCWNTILRILAETNDEHLQ----SEALMLFSAMLCDGRVKPNRFTFP 126
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+ +AC R R REG Q+HGL+ +FGF D + ++++ MY M++A +F +
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFC----K 182
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
+ V ++ + ++E L +R + V W MI G G+++ + LF+ MP
Sbjct: 183 NVVDFDG-------SCQME----LDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMP 231
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+ V+W +ISG+ N + EA F EM ++ PN +TL SVL A A L G
Sbjct: 232 PRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKW 291
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
IH + K +E D + ++LV +YSKCG++ A ++F + +RN ++++++I FA +G
Sbjct: 292 IHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGR 351
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
E+A+ F M G+ PN + ++ +LSAC+H GLVEEG +F M + ++P EHY
Sbjct: 352 AEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYG 411
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
CMVD+LGRAG L EA +LI +M EP +W ALLGA + H NL + + A+ LMEL P
Sbjct: 412 CMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPH 471
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLD 592
+ YV LS+LY+ +G RVR+K K IRK PGCSWI + +H FL S
Sbjct: 472 DSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSK 531
Query: 593 LKEIEVTLQTIS 604
KEI+ L +S
Sbjct: 532 AKEIQAMLGEMS 543
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 41/246 (16%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
+VV W M+DG + G + A+ +FD+MP ++VV+W M+ GY + F + +LF M+
Sbjct: 203 NVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQ 262
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+ N +TL + A R G +H + + D +LG++++ MY + G +D
Sbjct: 263 SSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSID 322
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------------------- 260
+A +VF + KR+A++W+++I + +G E+A F M
Sbjct: 323 KALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACS 382
Query: 261 ------PGKDFVSWTTMITGFSSK--------------GNLEKSIELFNMMP-EKDDVTW 299
G+ F S + G + G+LE++ EL MP E DDV W
Sbjct: 383 HAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIW 442
Query: 300 TAIISG 305
A++
Sbjct: 443 KALLGA 448
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 64/297 (21%)
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAI--ISGFVNNEQYE-EAFRWFIEMLRKD-VR 328
FSS+ +++ + +F MPE + W I I N+E + EA F ML V+
Sbjct: 61 CAFSSR-DIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVK 119
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN+ T SVL A A + L +G QIH +VK D + ++LV +Y C + DAY +
Sbjct: 120 PNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSL 179
Query: 389 FTN--------------------------------------------IDE---RNIVSYN 401
F DE R++VS+N
Sbjct: 180 FCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWN 239
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKT 460
MISG+AQNG EA+NLF++M+ + PN +T +SVL A +G +E G +I+ + K
Sbjct: 240 VMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN 299
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG----VWGALLGAGRTH 513
+E + +VD+ + GS+ +A+ + FE P W A++GA H
Sbjct: 300 --KVEIDDVLGSALVDMYSKCGSIDKALQV-----FETLPKRNAITWSAIIGAFAMH 349
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 11/271 (4%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS--VCSNALISG 80
I A +F MP R+ VS+ MI+G+ + G F EA L+ M + D V +++
Sbjct: 220 IKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPA 279
Query: 81 YLKVGRCEEAARIF----EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
++G E I + VE D V ++VD Y K G + +A ++F+ +P++N + W
Sbjct: 280 IARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITW 339
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG-LVS 195
+A++ + ED F M + G+ N + + AC EG +V
Sbjct: 340 SAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVK 399
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAY 254
G I ++ + GR G ++EA ++ M + D V W +L+ + ++
Sbjct: 400 VVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGE 459
Query: 255 RLFE---RMPGKDFVSWTTMITGFSSKGNLE 282
R+ E + D S+ + ++S GN E
Sbjct: 460 RVAETLMELAPHDSGSYVALSNLYASLGNWE 490
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 179/575 (31%), Positives = 303/575 (52%), Gaps = 42/575 (7%)
Query: 41 YAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLKVGRCEEAAR----IF 94
Y +I F ++G + L+ + W D+ + +G +A + +
Sbjct: 105 YNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVT 164
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
+ +E D S++D Y + + +FD+MP+++V++W M+ GY+K FED +
Sbjct: 165 KTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAIN 224
Query: 155 LFLSMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
+F M+ G+ + T+ AC R G ++H V R + I+GN+++ MY
Sbjct: 225 VFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYV-RDNVKFTPIIGNALLDMY 283
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMIT 273
+ G + A VF E MP K+ + WTTM++
Sbjct: 284 CKCGCLSIARAVF-------------------------------EEMPSKNVICWTTMVS 312
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
G+++ G LE++ ELF P +D V WTA+I+G+V +++EA F EM + V+P++
Sbjct: 313 GYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFI 372
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ S+L+ A T + QG IH + + + D + +L+ +Y+KCG + A IF +
Sbjct: 373 VVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLR 432
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
++ S+ S+I G A NG +AL LF KMK G+ P+ ITF+ VLSAC+H GLVEEG
Sbjct: 433 VKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRK 492
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP---GVWGALLGAG 510
+F SM+ Y I+P EHY C+VD+LGRAG L EA +LI + E ++G+LL A
Sbjct: 493 FFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSAC 552
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R + N+++ + A+ L++ E ++ + +L+++Y+ + D +VR K K ++K+PG
Sbjct: 553 RIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPG 612
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
CS I + +H F +G S +++EI L ++K
Sbjct: 613 CSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIMAK 647
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 186/443 (41%), Gaps = 72/443 (16%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--------------------- 67
+F MP R+ +S+ MI+G+V+ F +A ++ M
Sbjct: 194 LFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALK 253
Query: 68 -----------WRDSV-----CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
RD+V NAL+ Y K G A +FE M K+V+ W +MV G
Sbjct: 254 RLELGKKIHHYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSG 313
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y G + EARE+F+ P ++VV WTAM++GY++ + F++ LF M+ + + +
Sbjct: 314 YANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIV 373
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
L C + +G +H + D ++G ++I MY + GF+++A ++F +
Sbjct: 374 VSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRV 433
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
+D SW S+I G NG+ +A LF +M
Sbjct: 434 KDTASWTSIICGLAMNGKTSKALELFSKMKQAGV-------------------------- 467
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEM-LRKDVRPNQLTLSSVLSASAATATLNQG 350
DD+T+ ++S + EE ++F M + ++P ++ LN+
Sbjct: 468 -RPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEA 526
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI-----DERNIVSYNSMIS 405
++ + N V + SL+S GNV R+ + + ++ + + I
Sbjct: 527 EELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIY 586
Query: 406 GFAQNGLGEEALNLFRKMKDEGL 428
FA E+ + RKMKD G+
Sbjct: 587 AFADR--WEDVTKVRRKMKDLGV 607
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 196/651 (30%), Positives = 317/651 (48%), Gaps = 56/651 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV- 84
A +F +P RN VS+ ++ G RG F EA L+ + RW + +++ LK+
Sbjct: 484 AHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRL--RWEGHEVNQFVLTTVLKLV 541
Query: 85 ----------GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
G A ++ +++ +++D Y G V +AR +FD + K+ V
Sbjct: 542 VAMDTLGLAWGVHACACKLGH---DRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAV 598
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
AWTAMV Y + DC E+ +F MR N LT + A G +H
Sbjct: 599 AWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACS 658
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ +D + + +++ MY + G +++A F M++ D + W+ +IS Y + E+A+
Sbjct: 659 VKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAF 718
Query: 255 RLFERM------PGK---------------------------------DFVSWTTMITGF 275
LF RM P + + +I +
Sbjct: 719 ELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLY 778
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ ++E S+E+F+ + + ++V+W II G+ + E A F EM V Q+T S
Sbjct: 779 AKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYS 838
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
SVL A A+TA++N Q+H + K SD + NSL+ Y+KCG + DA IF + E
Sbjct: 839 SVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKEC 898
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
++VS+N++ISG+A +G A LF M + N ITF+++LS C GLV +G F
Sbjct: 899 DLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLF 958
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
SM+ + IEP EHY C+V +LGRAG L +A++ I + P VW ALL + H N
Sbjct: 959 DSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKN 1018
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
++L + +A+ ++E+EP T YV+LS++YS G R + +RK PG SW+
Sbjct: 1019 VELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVE 1078
Query: 576 LKDKVHLFLAGRKSCLDLKEIEVTLQTIS-KGTKEFDWPKHDWSLLGLERD 625
+K +VH F G + ++ I L+ ++ K +E P D L LE +
Sbjct: 1079 IKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEE 1129
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 221/466 (47%), Gaps = 82/466 (17%)
Query: 34 PMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-----ARWRDSVCSNALISGYLKVGRCE 88
P ++ +YA ++ G V RG ++ ++ AR D C+N L++ Y KVG
Sbjct: 424 PGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARL-DLFCANVLLNMYTKVGPFG 482
Query: 89 EAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDC 148
A R+F+ + E+++V++ ++V G+ +G
Sbjct: 483 SAHRVFDGLPERNMVSFVTLVQGHALRGE------------------------------- 511
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
FE+ LF +R G N LT + + VH + G D + +G++
Sbjct: 512 FEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSA 571
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG------ 262
+I Y G + +A +VF + +DAV+W +++S Y N E ++F +M
Sbjct: 572 LIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLN 631
Query: 263 --------KDFVSWTTMITG-------------------------FSSKGNLEKSIELFN 289
+ V ++++ G ++ GN+E + F
Sbjct: 632 PFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFE 691
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
M+ D + W+ +IS + Q E+AF FI M+R V PN+ +LSSVL A A L+
Sbjct: 692 MVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDL 751
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G QIH H +K+ ES++ + N+L+ LY+KC ++ + IF+++ + N VS+N++I G+++
Sbjct: 752 GKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSK 811
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC------NHVGLVE 449
+G GE AL++FR+M+ + Q+T+ SVL AC NHVG V
Sbjct: 812 SGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVH 857
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 5/226 (2%)
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
D ++ ++ G + +F+ +PE++ V++ ++ G ++EEA F +
Sbjct: 464 DLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLR 523
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ NQ L++VL A TL +HA K+ + + + ++L+ YS CG V
Sbjct: 524 WEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVS 583
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
DA R+F I ++ V++ +M+S +++N E L +F KM+ N SVL A
Sbjct: 584 DARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAV 643
Query: 444 HVGLVEEG-FIYFKSMKTLYNIEPGPEH-YACMVDILGRAGSLAEA 487
+ V G I+ S+KTLY+ E H Y ++D+ + G++ +A
Sbjct: 644 CLSSVVLGKGIHACSVKTLYDTE---RHVYGALLDMYAKCGNIEDA 686
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 289/538 (53%), Gaps = 49/538 (9%)
Query: 124 IFDKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
+F+K +K NV +W +++ + + F SMR+ + N T ++C
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
G Q H FGF+ D+ + ++++ MY + G + +A +F +S R+ VSW S+I+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226
Query: 243 GYVHNGEIEEAYRLFE------------------------------RMPGK--------- 263
GYV N + A LF+ R+ K
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286
Query: 264 --------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
D T++ ++ G L S +F+ M E+D ++W +II+ + N E+
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346
Query: 316 FRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
F M++ ++ N +TLS+VL A A + + G IH V+KM +ES+V + S++
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIID 406
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y KCG V A + F + E+N+ S+++M++G+ +G +EAL +F +M G+ PN IT
Sbjct: 407 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYIT 466
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F+SVL+AC+H GL+EEG+ +FK+M +++EPG EHY CMVD+LGRAG L EA DLI M
Sbjct: 467 FVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGM 526
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
P VWGALLGA R H N+DL +++A+ L EL+P + YV+LS++Y+ G+ D
Sbjct: 527 KLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVE 586
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
R+R+ K + K PG S + +K +VH+FL G + ++I L+ +S +E +
Sbjct: 587 RMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGY 644
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 141/587 (24%), Positives = 249/587 (42%), Gaps = 107/587 (18%)
Query: 2 ADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
+ R S A++ +NN ++ F + N S+ ++I R G EA +
Sbjct: 83 SKRRSICAGAVLRRRYSNNPNLTTLFNKYVDKT--NVFSWNSVIAELARSGDSVEALRAF 140
Query: 62 VNM------PARWRDSVCSNALISGYLKVGRCEEAARIFEAMV---EKDVVAWGSMVDGY 112
+M P R C+ S L + +A + +A++ E D+ ++VD Y
Sbjct: 141 SSMRKLSLKPNR-STFPCAIKSCSALLDLHSGRQAHQ--QALIFGFEPDLFVSSALVDMY 197
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL--------SMRRGGM 164
K G + +AR +FD++ +N+V+WT+M+ GY++ D LF S G +
Sbjct: 198 SKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEV 257
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
+ I + + AC R VHG + + GF+ D+ + N+++ Y + G + + +
Sbjct: 258 CVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRR 317
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSW---------------- 268
VF M++RD +SWNS+I+ Y NG E+ +F RM +++
Sbjct: 318 VFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSG 377
Query: 269 ------------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
T++I + G +E + + F+ M EK+ +W+A+++
Sbjct: 378 SQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVA 437
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNME 363
G+ + +EA F EM V+PN +T SVL+A + L +G H K M+ E
Sbjct: 438 GYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG----WHWFKAMSHE 493
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
DV E + Y M+ + G +EA +L + M
Sbjct: 494 FDV---------------------------EPGVEHYGCMVDLLGRAGYLKEAFDLIKGM 526
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAG 482
K L P+ + + ++L AC V+ G I S + L+ ++P +Y + +I AG
Sbjct: 527 K---LRPDFVVWGALLGACRMHKNVDLGEI---SARKLFELDPKNCGYYVLLSNIYADAG 580
Query: 483 SLAEA----IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
+ I + NS +PP + + GR H+ L + QH
Sbjct: 581 RWEDVERMRILMKNSGLVKPPG--FSLVDIKGRVHVFLVGDREHPQH 625
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 178/536 (33%), Positives = 293/536 (54%), Gaps = 65/536 (12%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
VE D V +V Y G + E R IFDK+ + V W +++GY K+ F + L
Sbjct: 132 VEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSL-- 189
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
F R RE LG +
Sbjct: 190 -----------------------FKRMRE------------------LG---------IR 199
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTT--- 270
++ A K+F + RD +SWNS+ISGYV NG E+ LFE+M D + +
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVEL 259
Query: 271 -----MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
++ +S GNL +I++F M E+ V+WT++I+G+ + + R F EM ++
Sbjct: 260 TLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKE 319
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
D+ PN +T++ +L A A+ A L +G +IH H+++ D + N+LV +Y KCG + A
Sbjct: 320 DLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLA 379
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+F I E+++VS+ MI+G+ +G G EA+ F +M++ G+ P++++F+S+L AC+H
Sbjct: 380 RLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHS 439
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GL++EG+ +F M+ IEP EHYAC+VD+L RAG+L++A I M EP +WGA
Sbjct: 440 GLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGA 499
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LL R + ++ LA+ A+H+ ELEP++ YV+L+++Y+ K + ++R + + +
Sbjct: 500 LLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGL 559
Query: 566 RKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL-QTISKGTKEFDWPKHDWSLL 620
RK+PGCSWI +K KVH+F+ G S +IE+ L +T ++ +E +PK ++L+
Sbjct: 560 RKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALI 615
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 168/379 (44%), Gaps = 40/379 (10%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---------PARW----- 68
+ E IF + + ++ G+ + G F E+ L+ M AR
Sbjct: 152 LREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDEL 211
Query: 69 --RDSVCSNALISGYLKVGRCEEAARIFE------------AMVEKDVVAWGSMVDGYCK 114
RD + N++ISGY+ G E+ +FE MV ++ ++D Y K
Sbjct: 212 GDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSK 271
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + A ++F+ M E++VV+WT+M+ GY + + LF M + + NSIT+ +
Sbjct: 272 SGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACI 331
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
AC G ++HG + R GF D + N+++ MY + G + A +F M+ ++D
Sbjct: 332 LPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDL 391
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNM 290
VSW +I+GY +G EA F M D VS+ +++ S G L++ FNM
Sbjct: 392 VSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNM 451
Query: 291 MP-----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
M E + I+ +A++ FI+M+ + P+ ++L
Sbjct: 452 MRNNCCIEPKSEHYACIVDLLARAGNLSKAYK-FIKMM--PIEPDATIWGALLCGCRIYH 508
Query: 346 TLNQGSQIHAHVVKMNMES 364
+ ++ HV ++ E+
Sbjct: 509 DVKLAEKVAEHVFELEPEN 527
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 163/377 (43%), Gaps = 87/377 (23%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG------------- 116
D V + L+ Y+ G E RIF+ + + V W +++GY K G
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR 194
Query: 117 -----RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
RV AR++FD++ +++V++W +M+ GY+ E G DLF M G+ + T+
Sbjct: 195 ELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATM 254
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
++ L N ++ MY + G ++ A +VF M +
Sbjct: 255 V---------------------------SVELTLNNCLLDMYSKSGNLNSAIQVFETMGE 287
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIE- 286
R VSW S+I+GY G + + RLF M +D ++ ++ +S LE+ E
Sbjct: 288 RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEI 347
Query: 287 ----------------------------------LFNMMPEKDDVTWTAIISGFVNNEQY 312
LF+M+PEKD V+WT +I+G+ +
Sbjct: 348 HGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYG 407
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN--MESDVSIQN 370
EA F EM + P++++ S+L A + + L++G ++++ N +E
Sbjct: 408 SEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFF-NMMRNNCCIEPKSEHYA 466
Query: 371 SLVSLYSKCGNVVDAYR 387
+V L ++ GN+ AY+
Sbjct: 467 CIVDLLARAGNLSKAYK 483
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 54/326 (16%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
+ DR S+N+MI+ ++N S + ++F M + + A + EL
Sbjct: 211 LGDRDVISWNSMISGYVSNGLS-EKGLDLFEQMLLLGINTDLATMVSV----------EL 259
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+N N L+ Y K G A ++FE M E+ VV+W SM+ GY ++G
Sbjct: 260 TLN-----------NCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDM 308
Query: 121 AREIFDKMPEK----NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN---SITLTI 173
+ +F +M ++ N + ++ + E G ++ + R G + + + L
Sbjct: 309 SVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVD 368
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDY----DIILGNSIITMYGRLGFMDEANKVFSMM 229
++ CG GL +R FD D++ +I YG G+ EA F+ M
Sbjct: 369 MYLKCGAL----------GL-ARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM 417
Query: 230 S----KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS-----WTTMITGFSSKGN 280
+ D VS+ S++ H+G ++E + F M + + ++ + GN
Sbjct: 418 RNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGN 477
Query: 281 LEKSIELFNMMP-EKDDVTWTAIISG 305
L K+ + MMP E D W A++ G
Sbjct: 478 LSKAYKFIKMMPIEPDATIWGALLCG 503
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 41/274 (14%)
Query: 19 NNC---------SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-- 67
NNC ++ A ++F TM R+ VS+ +MI G+ R G+ + L+ M
Sbjct: 262 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDL 321
Query: 68 WRDSVCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEARE 123
+ +S+ ++ + E I ++ D ++VD Y K G + AR
Sbjct: 322 FPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARL 381
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+FD +PEK++V+WT M+ GY + F MR G+ + ++ + AC
Sbjct: 382 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 441
Query: 184 YREGVQVHGLVSRFGFDYDIILGN-----------SIITMYGRLGFMDEANKVFSMMS-K 231
EG +GF ++++ N I+ + R G + +A K MM +
Sbjct: 442 LDEG---------WGF-FNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIE 491
Query: 232 RDAVSWNSLISG--YVHNGEIEE--AYRLFERMP 261
DA W +L+ G H+ ++ E A +FE P
Sbjct: 492 PDATIWGALLCGCRIYHDVKLAEKVAEHVFELEP 525
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 195/601 (32%), Positives = 294/601 (48%), Gaps = 119/601 (19%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEK---DVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
N L+S Y + G E A ++F+ M E+ D+V+W S+V Y + G I A ++F++M E
Sbjct: 165 NGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTE- 223
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
DL G+ ++++L + AC + G QVH
Sbjct: 224 ----------------------DL-------GIRPDAVSLVNVLPACASVGAWSRGKQVH 254
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS--------------- 236
G R G D+ +GN+++ MY + G M+EANKVF M +D VS
Sbjct: 255 GYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFD 314
Query: 237 --------------------WNSLISGYVHNGEIEEAYRLFERM---------------- 260
W+++I+GY G EA +F +M
Sbjct: 315 DALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLL 374
Query: 261 ------------------------------PGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
PG D + +I +S + + + +F++
Sbjct: 375 SGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDL 434
Query: 291 MPEKDD--VTWTAIISGFVNNEQYEEAFRWFIEMLRKD--VRPNQLTLSSVLSASAATAT 346
+P KD VTWT +I G + + EA F +ML+ D V PN T+S L A A
Sbjct: 435 IPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGA 494
Query: 347 LNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
L G QIHA+V++ ES + + N L+ +YSK G+V A +F N+ +RN VS+ S+++
Sbjct: 495 LRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMT 554
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G+ +G GEEAL +F +M+ GLVP+ +TF+ VL AC+H G+V++G YF M + +
Sbjct: 555 GYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVV 614
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
PG EHYACMVD+L RAG L EA++LI M +P P VW ALL A R + N++L + AA
Sbjct: 615 PGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQ 674
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
L+ELE + Y +LS++Y+ +D R+R K I+K PGCSW+ + F A
Sbjct: 675 LLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFA 734
Query: 586 G 586
G
Sbjct: 735 G 735
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 192/383 (50%), Gaps = 44/383 (11%)
Query: 86 RCEEA--ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV---VAWTAMV 140
RC + A +F + E +V +V Y + G AR++FD+M E+ V V+W ++V
Sbjct: 143 RCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIV 202
Query: 141 DGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
YM+ +F M G+ ++++L + AC + G QVHG R G
Sbjct: 203 AAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGL 262
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D+ +GN+++ MY + G M+EANKVF M +D VSWN++++GY G ++A LFE+
Sbjct: 263 FEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEK 322
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
+ E+ IEL + VTW+A+I+G+ EA F
Sbjct: 323 IR--------------------EEKIEL-------NVVTWSAVIAGYAQRGLGFEALDVF 355
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK--MNME-----SDVSIQNSL 372
+M PN +TL S+LS A TL G + H H +K +N++ D+ + N+L
Sbjct: 356 RQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINAL 415
Query: 373 VSLYSKCGNVVDAYRIFTNI--DERNIVSYNSMISGFAQNGLGEEALNLFRKM--KDEGL 428
+ +YSKC + A +F I +R++V++ +I G AQ+G EAL LF +M D +
Sbjct: 416 IDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFV 475
Query: 429 VPNQITFLSVLSACNHVGLVEEG 451
+PN T L AC +G + G
Sbjct: 476 MPNAFTISCALMACARLGALRFG 498
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 169/535 (31%), Positives = 289/535 (54%), Gaps = 30/535 (5%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
++ +I Y ++G +A R F+ KDVVAW +++ G K G + +AR + + P +NV
Sbjct: 143 ASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNV 202
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V WT ++ GY + + D F SM G+A + +T+ + ACG+ G +H L
Sbjct: 203 VTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHML 262
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V L ++I MY + G A +VF + +
Sbjct: 263 VGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGR---------------------- 300
Query: 254 YRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
G+ W MI G+ G+++ + LF+ M + D +T+ ++I+G+++ +
Sbjct: 301 --------GRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLR 352
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EA F +M R + + T+ +L+ASA+ L QG +HA + + +E DV + +L+
Sbjct: 353 EALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALL 412
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y KCG V +A F + R++ ++++MI G A NG+G+ AL F MK +G N +
Sbjct: 413 DMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSV 472
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
T+++VL+AC+H L++EG +YF M+ L+NI P EHY CM+D+LGR+G L EA+DL+ +
Sbjct: 473 TYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQT 532
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
M +P +W ++L A R H N+DLA+ AA HL++LEP YV + ++Y + D
Sbjct: 533 MPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDA 592
Query: 554 NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+++R + + ++K+ G S I + +VH F+ G +S + EI V ++ I + K
Sbjct: 593 SKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLK 647
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 179/422 (42%), Gaps = 67/422 (15%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +FD+MP + TA+ + + L+ M + ++ T LF+ C R
Sbjct: 56 ALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCAR 115
Query: 181 FFRY-REGVQVHGLVSRFGFDYDI-ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+ G +H R + ++ + II MY LG +A + F S +D V+W
Sbjct: 116 GGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWT 175
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
++ISG G +++A RL R P ++ V+WT +I+G+S G ++++ FN
Sbjct: 176 TVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFN--------- 226
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
ML + P+++T+ +LSA LN G +H V
Sbjct: 227 ----------------------SMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVG 264
Query: 359 KMNMESDVSIQNSLVSLYSKCGN----------------------VVDAY---------- 386
M + +L+ +Y+KCG+ ++D Y
Sbjct: 265 DKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIAR 324
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+F +++ +++++NS+I+G+ G EAL LF KM+ GL + T + +L+A +G
Sbjct: 325 SLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLG 384
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
+ +G ++ +E ++D+ + G + EA+ M+ W A+
Sbjct: 385 ALPQGRALHACIEQRL-VERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVR-DVHTWSAM 442
Query: 507 LG 508
+G
Sbjct: 443 IG 444
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 182/422 (43%), Gaps = 55/422 (13%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------SVCS 74
+A + A P+RN V++ +I+G+ R G EA + + +M + S C
Sbjct: 189 DARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACG 248
Query: 75 N---------------------------ALISGYLKVGRCEEAARIFEAMVE-KDVVAWG 106
ALI Y K G A +F+A+ + W
Sbjct: 249 QLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWN 308
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+M+DGYCK G V AR +FD+M + +V+ + +++ GY+ + LF MRR G+
Sbjct: 309 AMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGA 368
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
++ T+ L A +G +H + + + D+ LG +++ MY + G ++EA F
Sbjct: 369 DNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAF 428
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLE 282
MS RD +W+++I G NG + A F M F V++ ++T S L+
Sbjct: 429 KQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLD 488
Query: 283 KSIELF-------NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ F N+ P+ + + +I + +EA M ++PN + +
Sbjct: 489 EGRLYFDEMRLLHNIRPQIEH--YGCMIDLLGRSGLLDEAMDLVQTM---PMQPNAVIWA 543
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+LSA ++ H++K+ D ++ + ++Y DA +I +++R
Sbjct: 544 SILSACRVHKNVDLAQNAAHHLLKLEPAED-AVYVQMYNIYIDSRQWEDASKIRRLMEKR 602
Query: 396 NI 397
+
Sbjct: 603 GV 604
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 195/665 (29%), Positives = 328/665 (49%), Gaps = 75/665 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY--------------------V 62
+ A ++F MP RN VS+ +++ + G+F E+ L+ +
Sbjct: 247 VESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVI 306
Query: 63 NMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
+ AR + LK+G C E + S++D Y K G + EAR
Sbjct: 307 PLCARQGEVRLGMVFHGLALKLGLCGE------------LKVNSSLLDMYSKCGYLCEAR 354
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEACGRF 181
+FD EKNV++W +M+ GY K F F+L M+ + N +TL + C
Sbjct: 355 VLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEE 413
Query: 182 FRYREGVQVHGLVSRFGF-DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
++ + ++HG R GF D ++ N+ + Y + G + A VF M + SWN+L
Sbjct: 414 IQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNAL 473
Query: 241 ISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIEL--------- 287
I G+V NG +A L+ M G D + ++++ + +L E+
Sbjct: 474 IGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGF 533
Query: 288 --------------------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
F+ M EK+ V W +I+GF NE +A F +
Sbjct: 534 ELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQ 593
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
ML + P+++++ L A + + L G ++H VK ++ + SL+ +Y+KCG
Sbjct: 594 MLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGC 653
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ + IF + + V++N +I+G+ +G G +A+ LF+ M++ G P+ +TF+++L+A
Sbjct: 654 MEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTA 713
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
CNH GLV EG Y M++L+ I+P EHYAC+VD+LGRAG L EA++L+N + +P
Sbjct: 714 CNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSR 773
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
+W +LL + R + +LD+ + A L+EL PD A YV++S+ Y+ +GK + ++R + K
Sbjct: 774 IWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMK 833
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
++K GCSWI + KV FL G +S L +I+ T + K + + P L
Sbjct: 834 EIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLH 893
Query: 621 GLERD 625
LE D
Sbjct: 894 ELEED 898
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 147/580 (25%), Positives = 272/580 (46%), Gaps = 71/580 (12%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S Y++ +F +N + A+++G++R +F +A ++V M + + V N +
Sbjct: 144 SPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMIS-LTEFVPDNFTLPCV 202
Query: 82 LK--VG----RCEEAARIF--EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+K VG R EA F + V DV +++ Y K G V A ++FDKMP++N+
Sbjct: 203 IKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNL 262
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRG--GMAFNSITLTILFEACGRFFRYREGVQVH 191
V+W +++ ++ FE+ + LF + G G+ + T+ + C R R G+ H
Sbjct: 263 VSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFH 322
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
GL + G ++ + +S++ MY + G++ EA +F ++++ +SWNS+I GY + +
Sbjct: 323 GLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFR 381
Query: 252 EAYRLFERMPGKDFVS-----------------------------------------WTT 270
A+ L +M +D V
Sbjct: 382 GAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANA 441
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+ G++ G+L + +F M K +W A+I G V N +A ++ M + P+
Sbjct: 442 FVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPD 501
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
T++S+LSA A +L+ G +IH +++ E D I SLVSLY +CG ++ A F
Sbjct: 502 LFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFD 561
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
N++E+N+V +N+MI+GF+QN +AL++F +M + P++I+ + L AC+ V +
Sbjct: 562 NMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRL 621
Query: 451 GFIYFKSMKTLYNIEPGPEH--YAC-MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
G K + EH C ++D+ + G + ++ ++ + + + W L+
Sbjct: 622 G----KELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEV-TWNVLI 676
Query: 508 ------GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G GR + L + PDS T +L+
Sbjct: 677 TGYGIHGHGRKAIEL----FKSMQNAGFRPDSVTFIALLT 712
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 192/420 (45%), Gaps = 72/420 (17%)
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
P D V L++ Y ++ +F A K++ W +++ GY + +A +
Sbjct: 123 PHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFV 182
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F +M ++ T V ++ TL + +AC +
Sbjct: 183 FVEM-----ISLTEFVP-------------------------DNFTLPCVIKACVGVYDV 212
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R G VHG + D+ +GN++I MYG+ GF++ A KVF M +R+ VSWNS++
Sbjct: 213 RLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYAC 272
Query: 245 VHNGEIEEAYRLFERMPGKD---FVSWTTMIT------------------GFSSK----G 279
+ NG EE+Y LF+ + D TM+T G + K G
Sbjct: 273 LENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCG 332
Query: 280 NLEKSIELFNMMP---------------EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
L+ + L +M EK+ ++W ++I G+ + + AF +M
Sbjct: 333 ELKVNSSLLDMYSKCGYLCEARVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQM 392
Query: 325 KD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNV 382
+D V+ N++TL +VL + +IH + ++ ++SD + N+ V+ Y+KCG++
Sbjct: 393 EDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSL 452
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
A +F ++ + + S+N++I G QNG +AL+L+ M+ GL P+ T S+LSAC
Sbjct: 453 HYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSAC 512
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 128/249 (51%), Gaps = 6/249 (2%)
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
D V T ++T +S + S +FN K+ W A++SG++ N + +A F+EM+
Sbjct: 128 DVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMI 187
Query: 324 R-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ P+ TL V+ A + G +H +K + SDV + N+L+++Y K G V
Sbjct: 188 SLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFV 247
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM--KDEGLVPNQITFLSVLS 440
A ++F + +RN+VS+NS++ +NG+ EE+ LF+ + DEGL+P+ T ++V+
Sbjct: 248 ESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIP 307
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
C G V G + F + + + + ++D+ + G L EA L + T E
Sbjct: 308 LCARQGEVRLGMV-FHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD--TNEKNV 364
Query: 501 GVWGALLGA 509
W +++G
Sbjct: 365 ISWNSMIGG 373
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 21/183 (11%)
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISG-------------FVNNEQYEEAFRWFIEMLRKD 326
N+ I + P K ++ IIS N +AF + L
Sbjct: 25 NINNKIPFHSFTPPKSSHLFSPIISSHKKQQNASKHFHNLCNTGNLNQAFNFLQSNLNDV 84
Query: 327 V-----RPNQLTLSSVLSASAATATLNQGSQIHAHV-VKMNMESDVSIQNSLVSLYSKCG 380
V +P QL + +L + G +IH + + ++DV + LV++YS C
Sbjct: 85 VSSSNSKPKQL-IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICD 143
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD-EGLVPNQITFLSVL 439
+ D+ +F +N+ +N+++SG+ +N L +A+ +F +M VP+ T V+
Sbjct: 144 SPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVI 203
Query: 440 SAC 442
AC
Sbjct: 204 KAC 206
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 192/670 (28%), Positives = 330/670 (49%), Gaps = 108/670 (16%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--------------------- 64
A ++F MP RN VS+A++I V+ G +A L+ +M
Sbjct: 105 ARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTE 164
Query: 65 ----------------PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
R D + NAL++ Y K G ++ +FE + +KD+++WGS+
Sbjct: 165 LGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSI 224
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
+ G+ ++G +EA ++F KM +V+G + F G
Sbjct: 225 IAGFAQQGFEMEALQVFRKM----------IVEGSHHPNEFHFGS--------------- 259
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
F ACG + G Q+HGL ++ D D+ +G S+ MY R +D A F
Sbjct: 260 -----AFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYR 314
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-------------------GKDFVSWT 269
+ D VSWNS+++ Y G + EA LF M G+D +
Sbjct: 315 IEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHG 374
Query: 270 TMITGFSSK--------------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+I + K +L ++++F+ + ++D VTW +I++ +
Sbjct: 375 RLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQH 434
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
EE + F + + + ++++L++VLSASA Q+HA+ K + D +
Sbjct: 435 NHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLS 494
Query: 370 NSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
N+L+ Y+KCG++ DA R+F + + R++ S++S+I G+AQ G +EAL+LF +M+ G+
Sbjct: 495 NTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGI 554
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
PN +TF+ VL+AC+ VG V EG Y+ M+ Y I P EH +C+VD+L RAG L EA
Sbjct: 555 RPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAA 614
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
+ I+ M FEP +W LL A + H ++++ K AA+ ++ ++P + YV+L ++Y+ G
Sbjct: 615 NFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASG 674
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
+ R++ + ++KSPG SW+ LK ++ +F+ +S + +EI L+ I
Sbjct: 675 NWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMI 734
Query: 609 EFDW-PKHDW 617
+ + PKH W
Sbjct: 735 KAGYVPKHSW 744
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 213/459 (46%), Gaps = 53/459 (11%)
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
+A + + V ++ Y + AR++FD+MP +N V+W +++ +++ D
Sbjct: 79 DAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALG 138
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
LF SM R G A + L AC G QVH + D+I+ N+++TMY
Sbjct: 139 LFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYS 198
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------P-----G 262
+ G +D+ +F + +D +SW S+I+G+ G EA ++F +M P G
Sbjct: 199 KNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFG 258
Query: 263 KDFV------SWT--TMITGFSSKGNLEKSIEL--------------------FNMMPEK 294
F SW I G S K L++ + + F +
Sbjct: 259 SAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAP 318
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D V+W +I++ + EA F EM +RP+ +T+ +L A L G IH
Sbjct: 319 DLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIH 378
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+++VK+ ++ DVS+ NSL+S+Y++C ++ A +F I ++++V++NS+++ AQ+ E
Sbjct: 379 SYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPE 438
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL--YNIEPGPEH-- 470
E L LF + ++I+ +VLSA +G YF+ +K + Y + G
Sbjct: 439 EVLKLFSLLNKSEPSLDRISLNNVLSASAELG-------YFEMVKQVHAYAFKAGLVDDR 491
Query: 471 --YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
++D + GSL +A+ L M W +L+
Sbjct: 492 MLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLI 530
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 122/534 (22%), Positives = 224/534 (41%), Gaps = 87/534 (16%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA++T + + N + + F +F + ++ +S+ ++I GF ++G EA +++ M
Sbjct: 191 NALVT-MYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGS 249
Query: 70 DSVCSNALISGYLK---VGRCEEAARI----FEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
S + VG E +I + +++D+ S+ D Y + + AR
Sbjct: 250 HHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSAR 309
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC-GRF 181
F ++ ++V+W ++V+ Y + LF MR G+ + IT+ L AC GR
Sbjct: 310 VAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRD 369
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
Y G +H + + G D D+ + NS+++MY R + A VF + +D V+WNS++
Sbjct: 370 ALY-HGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSIL 428
Query: 242 SGYVHNGEIEEAYRLFERM----PGKDFVSW----------------------------- 268
+ + EE +LF + P D +S
Sbjct: 429 TACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLV 488
Query: 269 ------TTMITGFSSKGNLEKSIELFNMMPEKDDV-TWTAIISGFVNNEQYEEAFRWFIE 321
T+I ++ G+L+ ++ LF +M DV +W+++I G+ +EA F
Sbjct: 489 DDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSR 548
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M +RPN +T VL+A + +N+G ++ ME + I V C
Sbjct: 549 MRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYS-----IMEPEYGI----VPTREHCSC 599
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+VD A+ G EA N +M E P+ I + ++L+A
Sbjct: 600 IVDL---------------------LARAGKLTEAANFIDQMPFE---PDIIMWKTLLAA 635
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPG-PEHYACMVDILGRAGSLAEAIDLINSM 494
+E G ++ + + NI+P Y + +I +G+ E L +M
Sbjct: 636 SKMHNDMEMG---KRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAM 686
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMES-------DVSIQNSLVSLYSKCGNVVDAYR 387
++++SA + +L QG ++H H+V + S + + N L+++Y +C A +
Sbjct: 48 AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQ 107
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + RN VS+ S+I+ QNG +AL LF M G +Q S + AC +G
Sbjct: 108 VFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 167
Query: 448 VEEG 451
V G
Sbjct: 168 VGTG 171
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 323/607 (53%), Gaps = 64/607 (10%)
Query: 55 YEAEELYVNMPARWRDSVCSNAL--ISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY 112
++ E L ++ ++ D + N + I G++ +++ I ++ + + G +D Y
Sbjct: 44 HQRELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLI-RTLTKLGVPMDPY 102
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
+ RVIE + +N WTA++ GY F++ ++ MR+ + S T +
Sbjct: 103 PR--RVIEPVQF------RNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFS 154
Query: 173 ILFEACGRFFRYREGVQVHGLVSRF-GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
L +ACG G Q H R GF + + +GN++I MY
Sbjct: 155 ALLKACGSMGDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMY------------------ 195
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
V G I A ++F+ MP +D +SWT +I ++ GN+E + +LF +
Sbjct: 196 -------------VKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFESL 242
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA---ATATLN 348
P KD V WTA+++GF N + +EA +F M + +R +++T++ +SA A A+ +
Sbjct: 243 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD 302
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+ QI A + V I ++L+ +YSKCGNV +A +F +++ +N+ SY+SMI G A
Sbjct: 303 RAVQI-AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLA 361
Query: 409 QNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
+G +EAL+LF M + + PN +TF+ L+AC+H GLV++G F SM + +EP
Sbjct: 362 THGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPT 421
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
+HY CMVD+LGRAG L EA++LI +M+ EP GVWGALLGA R H N D+A++AA+HL
Sbjct: 422 RDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHLF 481
Query: 528 ELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD-KVHLFLAG 586
ELEPD Y++LS++YS G VR K K ++K+P SW++ K+ ++H F G
Sbjct: 482 ELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPG 541
Query: 587 RKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLERDWSY----TADNIKRIKKFDWP 642
+ K+I+ L+ + + + LG + D S +DN KR+
Sbjct: 542 NLNHPMSKKIQDKLEELVE----------RLTALGYQPDLSSVPYDVSDNAKRLILIQHT 591
Query: 643 KQYLVSF 649
++ ++F
Sbjct: 592 EKLALAF 598
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 147/627 (23%), Positives = 252/627 (40%), Gaps = 137/627 (21%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALIS-GY 81
+ + RN + A+I G+ G F EA +Y M P + S A S G
Sbjct: 106 VIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGD 165
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L +GR + A+ F V +M+D Y K G ++ AR++FD+MPE++V++WT ++
Sbjct: 166 LNLGR-QFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIA 224
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
Y +V E DLF S+ M + T + + + +E ++ + + G
Sbjct: 225 AYARVGNMESAADLFESLPTKDM----VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRA 280
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKR------DAVSWNSLISGYVHNGEIEEAYR 255
D + I+ +LG A++ + K V ++LI Y G +EEA
Sbjct: 281 DEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVN 340
Query: 256 LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
+F M K+ S+++MI G ++ G +++++LF+ M VT TAI
Sbjct: 341 VFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYM-----VTQTAI------------- 382
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+PN +T L+A + + ++QG Q+ A S+
Sbjct: 383 ------------KPNTVTFVGALTACSHSGLVDQGRQVFA------------------SM 412
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y G V+ R Y M+ + G +EAL L + M E P+ +
Sbjct: 413 YQTFG--VEPTRD----------HYTCMVDLLGRAGRLQEALELIKTMSVE---PHGGVW 457
Query: 436 LSVLSAC---NHVGLVEEGFIYFKSMKTLYNIEPG-PEHYACMVDILGRAGSLAEAID-- 489
++L AC N+ + E + + L+ +EP +Y + ++ AG +
Sbjct: 458 GALLGACRIHNNPDIAE------IAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVR 511
Query: 490 -LINSMTFEPPPGVWGALLGAGRTH------LNLDLAKLAAQHLMEL---------EPD- 532
LI + P V + G+ H LN ++K L EL +PD
Sbjct: 512 KLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSKKIQDKLEELVERLTALGYQPDL 571
Query: 533 SATPYVV---------------LSDLYSVIGKKRDGNRVRMKKKLK---------RIRKS 568
S+ PY V L+ +S++ RD +++ K L+ R+
Sbjct: 572 SSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDYT-IKIMKNLRMCQDCHMFMRLASE 630
Query: 569 PGCSWIILKD--KVHLFLAGRKSCLDL 593
II++D + H F +G SC D
Sbjct: 631 VTGRVIIMRDNMRFHHFRSGACSCGDF 657
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 19/310 (6%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+ +I A ++ A ++F ++P ++ V++ AM+TGF + EA E
Sbjct: 211 MPERDVISWTELIAAYARVG-NMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEY 269
Query: 61 YVNMPARW--RDSVCSNALISGYLKVGRCEEAARIFEAMVEK------DVVAWGSMVDGY 112
+ M D V IS ++G + A R + + VV +++D Y
Sbjct: 270 FDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMY 329
Query: 113 CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITL 171
K G V EA +F M KNV ++++M+ G ++ DLF M + + N++T
Sbjct: 330 SKCGNVEEAVNVFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTF 389
Query: 172 TILFEACGRFFRYREGVQVHG-LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
AC +G QV + FG + ++ + GR G + EA ++ MS
Sbjct: 390 VGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMS 449
Query: 231 -KRDAVSWNSLISG-YVHNG-EIEE--AYRLFERMPGKDFVSWTTMITG-FSSKGNLEKS 284
+ W +L+ +HN +I E A LFE P D + +++ +SS G+
Sbjct: 450 VEPHGGVWGALLGACRIHNNPDIAEIAAEHLFELEP--DIIGNYILLSNVYSSAGDWGGV 507
Query: 285 IELFNMMPEK 294
+ + ++ EK
Sbjct: 508 LSVRKLIKEK 517
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 195/649 (30%), Positives = 322/649 (49%), Gaps = 56/649 (8%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------SV 72
I EA IF M R+ +S+ ++I+ + + E+ + M + S+
Sbjct: 211 INEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSI 270
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
C + YLK G+ + + +E ++ +++ Y GR +A IF +MPE++
Sbjct: 271 CGSV---DYLKWGKGVHGLAV-KYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERD 326
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+++W +M+ Y++ +F M N +T T AC + G +HG
Sbjct: 327 LISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHG 386
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V G ++I+GN++IT YG+ M EA KVF M K D V+WN+LI G+ +N E+ E
Sbjct: 387 FVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNE 446
Query: 253 AYRLFERM-----PGKDFVS------------------------------------WTTM 271
A F+ M G D+++ +++
Sbjct: 447 AVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSL 506
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
IT ++ G+L S +F+ + K W AII+ EEA + + M + +Q
Sbjct: 507 ITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQ 566
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
S+ LS +A A L +G Q+H +K+ E D I N+ + +Y KCG + DA RI
Sbjct: 567 FNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQ 626
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+R+ +S+N++IS A++G +A F M G+ PN ++F+ +LSAC+H GLV+EG
Sbjct: 627 PTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEG 686
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
Y+ SM ++Y I+PG EH CM+D+LGR+G L EA I M P VW +LL + R
Sbjct: 687 LAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCR 746
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
+ NLDL + AA+HL+EL+P + YV+ S++++ IG+ D VR + +I+K P
Sbjct: 747 IYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAH 806
Query: 572 SWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSL 619
SW+ K + +F G ++ +++I L + K E + P +SL
Sbjct: 807 SWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSL 855
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 256/538 (47%), Gaps = 68/538 (12%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL---KVG 85
+F M RN S+ M++G+VR G + EA + RD SG++ V
Sbjct: 14 VFDRMSERNEASWNHMMSGYVRVGSYVEAVLFF-------RDICGIGIKPSGFMIASLVT 66
Query: 86 RCEEAARI------FEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
C +++ + F K DV S V Y G V A+++F++MP++NVV
Sbjct: 67 ACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVV 126
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WT+++ Y ++ + + MR G+ N + ++ +CG G Q+ G
Sbjct: 127 SWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHA 186
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+FG + + NS+I M+G G ++EA +F+ M++RD +SWNS+IS N EE++
Sbjct: 187 LKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESF 246
Query: 255 RLFERM-------------------PGKDFVSWTTMITGFSSKGNLEKSIEL-------- 287
R F M D++ W + G + K LE +I L
Sbjct: 247 RYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVY 306
Query: 288 ------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
F MPE+D ++W ++++ +V + + A + F EML N +T +
Sbjct: 307 SDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFT 366
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S L+A G +H VV + ++ ++ I N+L++ Y KC + +A ++F + +
Sbjct: 367 SALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKL 426
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP--NQITFLSVLSAC-NHVGLVEEGF 452
+ V++N++I GFA N EA+ F+ M+ EG + IT +++L +C H L++ G
Sbjct: 427 DKVTWNALIGGFANNAELNEAVAAFKLMR-EGSTSGVDYITIVNILGSCLTHEDLIKYGI 485
Query: 453 -IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
I+ ++ T ++++ + + ++ + + G L + + + + F+ VW A++ A
Sbjct: 486 PIHAHTVVTGFDLDQHVQ--SSLITMYAKCGDLHSSSYIFDQLVFKTSS-VWNAIIAA 540
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 146/576 (25%), Positives = 271/576 (47%), Gaps = 67/576 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN----ALI 78
+ A ++F MP RN VS+ +++ + G E Y M + +C N AL+
Sbjct: 110 VSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMR---HEGICCNENNIALV 166
Query: 79 ---SGYLK---VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
G+L +G + + +E V A S++ + G + EA IF++M E++
Sbjct: 167 ISSCGFLMDIILGH-QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERD 225
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
++W +++ + E+ F F MR N TL+IL CG + G VHG
Sbjct: 226 TISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHG 285
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
L ++G + +I L N+++++Y G +A +F M +RD +SWNS+++ YV +G
Sbjct: 286 LAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLC 345
Query: 253 AYRLFERM----PGKDFVSWT-----------------------------------TMIT 273
A ++F M ++V++T T+IT
Sbjct: 346 ALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLIT 405
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP--NQ 331
+ + ++ ++F MP+ D VTW A+I GF NN + EA F +++R+ +
Sbjct: 406 FYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAF-KLMREGSTSGVDY 464
Query: 332 LTLSSVLSASAATATL-NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+T+ ++L + L G IHAH V + D +Q+SL+++Y+KCG++ + IF
Sbjct: 465 ITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFD 524
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ + +N++I+ A+ G GEEAL L +M+ G+ +Q F + LS + ++EE
Sbjct: 525 QLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEE 584
Query: 451 G-FIYFKSMKTLYNIEPGPEHYA--CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
G ++ ++K + + +H+ +D+ G+ G L +A+ ++ T + W L+
Sbjct: 585 GQQLHGSTIKLGFEL----DHFIINAAMDMYGKCGELDDALRILPQPT-DRSRLSWNTLI 639
Query: 508 GAGRTHLNLDLAKLAAQHLMEL--EPDSATPYVVLS 541
H AK +++L +P+ + +LS
Sbjct: 640 SISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLS 675
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 216/477 (45%), Gaps = 53/477 (11%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K GR+ A+ +FD+M E+N +W M+ GY++V + + F + G+ + +
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61
Query: 172 TILFEACGRF-FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L AC + +EG Q HG + G YD+ +G S + Y G + A K+F+ M
Sbjct: 62 ASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMP 121
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV------------------------ 266
R+ VSW SL+ Y NG +E ++RM +
Sbjct: 122 DRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQ 181
Query: 267 ---------------SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
+ ++I F G++ ++ +FN M E+D ++W +IIS N
Sbjct: 182 LLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTL 241
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
+EE+FR+F M N TLS +LS + L G +H VK +ES++ + N+
Sbjct: 242 HEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNT 301
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
L+S+YS G DA IF + ER+++S+NSM++ + Q+G AL +F +M N
Sbjct: 302 LLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEIN 361
Query: 432 QITFLSVLSACNHV-----GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+TF S L+AC G + GF+ ++ I ++ G+ +AE
Sbjct: 362 YVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGN------TLITFYGKCHKMAE 415
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDL 543
A + M + W AL+G + L+ A +AA LM S Y+ + ++
Sbjct: 416 AKKVFQRMP-KLDKVTWNALIGGFANNAELNEA-VAAFKLMREGSTSGVDYITIVNI 470
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 45/307 (14%)
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG--------- 262
MY + G ++ A VF MS+R+ SWN ++SGYV G EA F + G
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 263 -------------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMM 291
D T+ + ++S G + + ++FN M
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
P+++ V+WT+++ + +N +E + M + + N+ ++ V+S+ + G
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
Q+ H +K +E+ VS NSL+ ++ CG++ +A IF ++ER+ +S+NS+IS AQN
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
L EE+ F M+ N T +LS C V ++ G K + L ++ G E
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWG----KGVHGL-AVKYGLESN 295
Query: 472 ACMVDIL 478
C+ + L
Sbjct: 296 ICLCNTL 302
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 137/276 (49%), Gaps = 7/276 (2%)
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+S G + + +F+ M E+++ +W ++SG+V Y EA +F ++ ++P+ +
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61
Query: 335 SSVLSASAATATL-NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+S+++A ++ + +G Q H +K + DV + S V Y+ G V +A ++F +
Sbjct: 62 ASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMP 121
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF- 452
+RN+VS+ S++ ++ NG +E +N +++M+ EG+ N+ V+S+C + + G
Sbjct: 122 DRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQ 181
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
+ ++K + +E ++ + G G + EA + N M E W +++ A
Sbjct: 182 LLGHALK--FGLETKVSAANSLIFMFGGCGDINEACSIFNEMN-ERDTISWNSIISANAQ 238
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
+ L H M L + Y LS L S+ G
Sbjct: 239 N-TLHEESFRYFHWMRLVHEEIN-YTTLSILLSICG 272
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 164/537 (30%), Positives = 276/537 (51%), Gaps = 71/537 (13%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F+ + +AW +++ Y F+ M G+ + + ++C
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN-------------------- 223
G +HG + R G D+D+ GN+++ MY +L F++E+
Sbjct: 122 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181
Query: 224 ------------KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF------ 265
K+F MM ++D VSWN++I+G NG EE R+ M G +
Sbjct: 182 RTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFT 241
Query: 266 -------------VSWTTMITGFSSKGNLEKSI--------------------ELFNMMP 292
+S I G S + L+ I +F ++
Sbjct: 242 LSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLT 301
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
E+D ++W +II+G V N ++E R+F +ML ++P + SS++ A A TL+ G Q
Sbjct: 302 ERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQ 361
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H ++ + + ++ I +SLV +Y+KCGN+ A +IF + R++VS+ +MI G A +G
Sbjct: 362 LHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQ 421
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
+A+ LF +M+ EG+ PN + F++VL+AC+H GLV+E + YF SM + I PG EHYA
Sbjct: 422 APDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYA 481
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
+ D+LGRAG L EA D I M P +W LL A R H N+D+A+ A ++E++P+
Sbjct: 482 AVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPN 541
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ Y++L+++YS + ++ + R + IRK+P CSWI +K+KV+ F+AG +S
Sbjct: 542 NTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDES 598
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 150/329 (45%), Gaps = 56/329 (17%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA-------- 121
D NAL++ Y K+ EE+ R + G + D ++ R +
Sbjct: 140 DLYTGNALMNMYSKLRFLEESGR--------QRLGAGEVFDEMTERTRSVRTVSVLSEDS 191
Query: 122 -REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
R+IF+ MPEK++V+W ++ G + +E+ + M + +S TL+ +
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
G ++HG R G D DI + +S+I MY + + ++ +VF+++++RD +SWNS+
Sbjct: 252 NVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSI 311
Query: 241 ISGYVHNGEIEEAYRLFERM------P--------------------GKDFVSWTT---- 270
I+G V NG +E R F +M P GK + T
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 371
Query: 271 ---------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
++ ++ GN+ + ++F+ M +D V+WTA+I G + Q +A F +
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQ 431
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQG 350
M + ++PN + +VL+A + +++
Sbjct: 432 METEGIKPNHVAFMAVLTACSHGGLVDEA 460
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 170/350 (48%), Gaps = 20/350 (5%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRDSVCSNA---LISGYL 82
+IF MP ++ VS+ +I G R G++ E + M DS ++ LI+ +
Sbjct: 194 KIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENV 253
Query: 83 KVGRCEE--AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
+ R +E I + + + D+ S++D Y K RV ++ +F + E++ ++W +++
Sbjct: 254 DISRGKEIHGCSIRQGL-DADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSII 312
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
G ++ F++G F M + S + + + AC G Q+HG ++R GFD
Sbjct: 313 AGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFD 372
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+I + +S++ MY + G + A ++F M RD VSW ++I G +G+ +A LFE+M
Sbjct: 373 ENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQM 432
Query: 261 PGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPE----KDDVTWTAIISGFVNNE-Q 311
+ + V++ ++T S G ++++ + FN M V A +S + +
Sbjct: 433 ETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGR 492
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
EEA+ + M + P +++LSA ++ ++ +++++
Sbjct: 493 LEEAYDFICGM---HIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVD 539
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 32/191 (16%)
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
L S+ LFN + + W ++I + ++ ++ FI ML + P+ SVL +
Sbjct: 56 LHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKS 115
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK-------------CGNVVD--- 384
A LN G +H +++++ ++ D+ N+L+++YSK G V D
Sbjct: 116 CALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMT 175
Query: 385 ----------------AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
+IF + E+++VS+N++I+G A+NGL EE L + R+M L
Sbjct: 176 ERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANL 235
Query: 429 VPNQITFLSVL 439
P+ T SVL
Sbjct: 236 KPDSFTLSSVL 246
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ ++L + + +Q Q+HA V+K S + + L+S+YS + D+ R+F I
Sbjct: 9 VKALLRNPLSIKSRSQAQQLHAQVLKFQASS-LCNLSLLLSIYSHINLLHDSLRLFNTIH 67
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+++ S+I + +GL ++L F M GL P+ F SVL +C
Sbjct: 68 FPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSC 116
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 198/658 (30%), Positives = 323/658 (49%), Gaps = 74/658 (11%)
Query: 14 TALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--------- 64
TA NNC + +F TM RN V++ MI+ +V+ EA +++ M
Sbjct: 161 TAYDFNNCDLVR--RVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTP 218
Query: 65 -------PARWR--DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
PA WR D +N L +K+G + D S + Y +
Sbjct: 219 VSFVNVFPAVWRMNDYDNANVLYGLVVKLG----------SDYVDDFFVVSSAIFMYAEL 268
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS-MRRGGMAFNSITLTIL 174
G V AREIFD E+N W M+ GY++ +C + DLF+ M + +T
Sbjct: 269 GCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSA 328
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
A + G Q+H + + +++ N+II MY R G + + KVFS M +RD
Sbjct: 329 LTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDV 388
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG-------------------- 274
V+WN+++S +V NG +E L M + F+ + +T
Sbjct: 389 VTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAY 448
Query: 275 ------------------FSSKGNLEKSIELF--NMMPEKDDVTWTAIISGFVNNEQYEE 314
++ G + + +LF N ++D+ TW A+I+G+ N EE
Sbjct: 449 LIRHGIQFEGMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEE 508
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
F F +M+ ++VRPN +TL+S+L A T+ G QIH ++ + +V + +L+
Sbjct: 509 GFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLD 568
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSK G + A +F E+N V+Y +MI + Q+G+GE AL+LF M G+ P+ +T
Sbjct: 569 MYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVT 628
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F+++LSAC++ GLV+EG F+SM+ Y I+P EHY C+ D+LGR G + EA + + +
Sbjct: 629 FVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGL 688
Query: 495 TFEPPP-GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP--YVVLSDLYSVIGKKR 551
E +WG+LLGA R H +L K+ A L+E+E S +V+LS++Y+ G
Sbjct: 689 GEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWD 748
Query: 552 DGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
+ +RVR + + K + K GCSW+ + V+ F++ EI L+ ++ K+
Sbjct: 749 NVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKD 806
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 234/518 (45%), Gaps = 73/518 (14%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMA 165
S + C++G +A +FD +P V W ++ G++ + D + MR
Sbjct: 42 SRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPK 101
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR-------LGF 218
F+S T + +AC + + G +H V R F I+ NS++ MY LG
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGT 161
Query: 219 ------MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------ 260
D +VF M KR+ V+WN++IS YV + EA+++F M
Sbjct: 162 AYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221
Query: 261 ----PG-------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMM 291
P DF ++ I ++ G ++ + E+F+
Sbjct: 222 VNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCC 281
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQG 350
E++ W +I G+V N EA F++++ + + +T S L+A + L+ G
Sbjct: 282 LERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLG 341
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
Q+HA+++K + V I N+++ +YS+CG++ ++++F+N+ ER++V++N+M+S F QN
Sbjct: 342 RQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQN 401
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
GL +E L L +M+ +G + + +T ++LS +++ E G Y I G +
Sbjct: 402 GLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIG-----KQAHAYLIRHGIQF 456
Query: 471 YAC---MVDILGRAGSLAEAIDLINSMT-FEPPPGVWGALLGAGRTHLNLDLAKLAAQHL 526
++D+ ++G + A L + ++ W A++ AG T L A
Sbjct: 457 EGMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMI-AGYTQNGLSEEGFAVFRK 515
Query: 527 M---ELEPDSATPYVVLSDLYSV----IGKKRDGNRVR 557
M + P++ T +L + +GK+ G +R
Sbjct: 516 MIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIR 553
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 181/446 (40%), Gaps = 92/446 (20%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATMP-----MRNAVSYAAMITGFVRRGMFYEA 57
+R + +N MI + NNC I EA ++F + + V++ + +T +
Sbjct: 283 ERNTEVWNTMIGGYVQNNCPI-EAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLG 341
Query: 58 EEL--YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
+L Y+ + V NA+I Y + G + ++F M+E+DVV W +MV + +
Sbjct: 342 RQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQN 401
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G +D ++G L M++ G +S+TLT L
Sbjct: 402 G-----------------------LD--------DEGLMLVFEMQKQGFMVDSVTLTALL 430
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS--KRD 233
G Q H + R G ++ + G +I MY + G + A ++F S RD
Sbjct: 431 SLASNLRSQEIGKQAHAYLIRHGIQFEGMDG-YLIDMYAKSGLITTAQQLFEKNSXYDRD 489
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM------P--------------------GKDFVS 267
+WN++I+GY NG EE + +F +M P GK
Sbjct: 490 EATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHG 549
Query: 268 W-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
+ T ++ +S G + + +F EK+ VT+T +I + + E
Sbjct: 550 FAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGER 609
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS--- 371
A F ML ++P+ +T ++LSA + +++G +I +ME + IQ S
Sbjct: 610 ALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIF-----QSMEREYKIQPSSEH 664
Query: 372 ---LVSLYSKCGNVVDAYRIFTNIDE 394
+ + + G V +AY + E
Sbjct: 665 YCCVADMLGRVGRVXEAYEFVKGLGE 690
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 192/679 (28%), Positives = 334/679 (49%), Gaps = 97/679 (14%)
Query: 4 RTSASYNAMITALINNNCSIY---------EAFEIFATMPMRNAVSYAAMITGFVRRGMF 54
AS + M+ ++ N IY +A+ +F M +R++VS++ M+ GF + G
Sbjct: 101 HAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGD- 159
Query: 55 YEAEELYVNMPARWRDSVCSNALISGY---LKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
Y+N +R+ + A Y + C + + A+V D
Sbjct: 160 ------YINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALV-----------DM 202
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K + +AR +FDKM E+++V WT M+ GY + + LF MR G+ + + +
Sbjct: 203 YVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAM 262
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ AC + + + + R F D+ILG ++I MY + G ++ A ++F M +
Sbjct: 263 VTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE 322
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK---------------------- 263
++ +SW+++I+ Y ++G+ +A LF M P K
Sbjct: 323 KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQV 382
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
+ + ++ +S L+ + LF+ M +D V+W+ ++ GF Y
Sbjct: 383 HAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDY 442
Query: 313 EEAFRWFIEMLRKDVRPNQLTLS----------------------------SVLSASAAT 344
F F E++R RP+ TL +V+ A A
Sbjct: 443 MNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKL 502
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+++ I ++ + + DV + +++ +++KCG V A IF ++E+N++S+++MI
Sbjct: 503 GAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMI 562
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
+ + +G G +AL+LF M G++PN+IT +S+L AC+H GLVEEG +F M Y++
Sbjct: 563 AAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSV 622
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
+HY C+VD+LGRAG L EA+ LI SMT E G+WGA LGA RTH ++ LA+ AA
Sbjct: 623 RADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAAT 682
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
L+EL+P + Y++LS++Y+ G+ D + R +R++K PG +WI + +K H F
Sbjct: 683 SLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFS 742
Query: 585 AGRKSCLDLKEIEVTLQTI 603
G + KEI L+++
Sbjct: 743 VGDTTHPRSKEIYEMLKSL 761
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 142/272 (52%), Gaps = 18/272 (6%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
QVH S G +I++ N +I Y +D+A +F M RD+VSW+ ++ G+ G
Sbjct: 99 QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 158
Query: 249 EIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLE----------KSIE----LFNM 290
+ + F + D + +I NL+ + IE LF+
Sbjct: 159 DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDK 218
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M E+D VTWT +I G+ + E+ F +M + V P+++ + +V+ A A +++
Sbjct: 219 MQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA 278
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
I ++ + + DV + +++ +Y+KCG V A IF ++E+N++S+++MI+ + +
Sbjct: 279 RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 338
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
G G +AL+LFR M G++P++IT S+L AC
Sbjct: 339 GQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
+SA L Q Q+HA M ++ + N L+ YS + DAY +F + R+
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
VS++ M+ GFA+ G FR++ G P+ T V+ AC
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC 189
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 305/587 (51%), Gaps = 50/587 (8%)
Query: 18 NNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNAL 77
+N+ + A +F +P + ++ +I+ + G EA + Y + R ++ V + L
Sbjct: 22 SNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDF--RHKNCVEPDKL 79
Query: 78 ISGYLKVGR-CEE------AARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFD 126
+ L V + C A R+ E + DV+ +++D Y K AR +F+
Sbjct: 80 L--LLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE 137
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
MP ++V++WT+M Y+ + F M G NS+T++ + AC +
Sbjct: 138 GMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKS 197
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +VHG V R G ++ + ++++ MY S +S
Sbjct: 198 GREVHGFVVRNGMGGNVFVSSALVNMYA------------------------SCLS---- 229
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN-MMPEK---DDVTWTAI 302
I +A +F+ M +D VSW +IT + EK + +F MM E + +W A+
Sbjct: 230 ---IRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAV 286
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
I G + N + E+A M +PNQ+T++SVL A +L G QIH ++ +
Sbjct: 287 IGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWF 346
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
D++ +LV +Y+KCG++ + R+F+ + +R+ VS+N+MI + +G GEEAL LFR+
Sbjct: 347 FQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFRE 406
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
M D G+ PN +TF VLS C+H LV+EG + F SM +++EP +H++CMVD+L RAG
Sbjct: 407 MVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAG 466
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L EA + I M EP G WGALLG R + N++L ++AA L E+E D+ YV+LS+
Sbjct: 467 RLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSN 526
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ + + R + + + K+PGCSWI ++++VH F+ G KS
Sbjct: 527 ILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKS 573
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 1/181 (0%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPN 330
I +S+ G+L+++ LF+ +P+ D TWT +IS + + EA +++ + K+ V P+
Sbjct: 18 IKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPD 77
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+L L SV A A+ + ++H ++ SDV + N+L+ +Y KC A +F
Sbjct: 78 KLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE 137
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ R+++S+ SM S + GL EAL FRKM G PN +T S+L AC + ++
Sbjct: 138 GMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKS 197
Query: 451 G 451
G
Sbjct: 198 G 198
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 7 ASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYV 62
AS+NA+I + N +A E+ + M N ++ +++ ++++
Sbjct: 281 ASWNAVIGGCMQNG-RTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHG 339
Query: 63 NMPARW--RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ W +D + AL+ Y K G E + R+F M ++D V+W +M+ G E
Sbjct: 340 YIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEE 399
Query: 121 A----REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
A RE+ D N V +T ++ G ++G +F SM R
Sbjct: 400 ALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSR 444
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 284/550 (51%), Gaps = 40/550 (7%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A IF+ + + A+ M+ G ++ LF M + + T + + +AC R
Sbjct: 74 ALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSR 133
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
REG QVH L+ + GF + + N++I MY G + A VF M +R V+WNS+
Sbjct: 134 MKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSM 193
Query: 241 ISGYVHNGEIEEAYRLFER------------------------------MPGKDFVS--- 267
+SGY NG +E +LF + + G+ VS
Sbjct: 194 LSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGL 253
Query: 268 ------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
T++I ++ G ++ + +LF+ M ++D V W+A+ISG+ ++ +EA F E
Sbjct: 254 RRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHE 313
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M + +V PN++T+ SVL + A G +H ++ K M+ V++ L+ Y+KCG
Sbjct: 314 MQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGY 373
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ + +F + +N+ ++ ++I G A NG G+ AL F M + + PN +TF+ VLSA
Sbjct: 374 IDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSA 433
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C+H LV++G F SM+ ++IEP EHY CMVDILGRAG L EA I++M F P
Sbjct: 434 CSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAV 493
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VW LL + R H N+++A+ + +H+ LEP + Y++LS+ Y+++G+ D RVR K
Sbjct: 494 VWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIK 553
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
K I+K PGCS I L VH F + KEI L + K K + P D + L
Sbjct: 554 EKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARL 613
Query: 621 GLERDWSYTA 630
E + T+
Sbjct: 614 EAEEESKETS 623
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 187/438 (42%), Gaps = 79/438 (18%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ Y G++ AR +FD MPE+++VAW +M+ GY K +++ LF + + F
Sbjct: 161 TLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEF 220
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ +T+ + ACGR G + + G + L S+I MY + G +D A K+F
Sbjct: 221 DDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLF 280
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-PGKDFVSWTTMI------------- 272
M KRD V+W+++ISGY +EA LF M G + + TM+
Sbjct: 281 DEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYE 340
Query: 273 TG-------------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
TG ++ G +++S+E+F M K+ TWTA+I G
Sbjct: 341 TGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLA 400
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
NN + + A +F ML DV+PN +T VLSA + ++QG + +M D
Sbjct: 401 NNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFN-----SMRRDFD 455
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I E I Y M+ + G EEA M
Sbjct: 456 I-------------------------EPRIEHYGCMVDILGRAGFLEEAYQFIDNMP--- 487
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE-HYACMVDILGRAGSLAE 486
PN + + ++L++C +E + KS++ + +EP Y + + G + +
Sbjct: 488 FPPNAVVWRTLLASCRAHKNIE---MAEKSLEHITRLEPAHSGDYILLSNTYALVGRVED 544
Query: 487 AI---DLINSMTFEPPPG 501
AI LI + PG
Sbjct: 545 AIRVRSLIKEKEIKKIPG 562
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 190/396 (47%), Gaps = 24/396 (6%)
Query: 20 NC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI 78
NC I A +F MP R+ V++ +M++G+ + G++ E +L+ + R +I
Sbjct: 168 NCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKI-LELRIEFDDVTMI 226
Query: 79 SGYLKVGRC---EEAARIFEAMVEKDV----VAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
S + GR E I E +V K + S++D Y K G+V AR++FD+M ++
Sbjct: 227 SVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKR 286
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+VVAW+AM+ GY + D ++ +LF M++G + N +T+ + +C Y G VH
Sbjct: 287 DVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVH 346
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
+ + + LG +I Y + G++D + +VF MS ++ +W +LI G +NGE +
Sbjct: 347 FYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGK 406
Query: 252 EAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAI 302
A F M D V++ +++ S +++ LFN M D+ + +
Sbjct: 407 MALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCM 466
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
+ EEA+++ M PN + ++L++ A + + H+ + +
Sbjct: 467 VDILGRAGFLEEAYQFIDNM---PFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITR--L 521
Query: 363 ESDVSIQNSLVS-LYSKCGNVVDAYRIFTNIDERNI 397
E S L+S Y+ G V DA R+ + I E+ I
Sbjct: 522 EPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEI 557
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 148/296 (50%), Gaps = 22/296 (7%)
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
++ ++ +FN + + + + +I G + A F +M K V+ ++ T SSVL
Sbjct: 70 TIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLK 129
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A + L +G Q+HA ++K +S+ ++N+L+ +Y+ CG + A +F + ER+IV+
Sbjct: 130 ACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVA 189
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-----FIY 454
+NSM+SG+ +NGL +E + LFRK+ + + + +T +SVL AC + +E G +I
Sbjct: 190 WNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIV 249
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
K ++ + ++D+ + G + A L + M + W A++ +
Sbjct: 250 SKGLRRNNTLTTS------LIDMYAKCGQVDTARKLFDEMD-KRDVVAWSAMISG---YA 299
Query: 515 NLDLAKLAAQHLMELEPDSATP--YVVLSDLYS--VIGKKRDGNRVRM---KKKLK 563
D K A E++ + P ++S LYS ++G G V KKK+K
Sbjct: 300 QADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMK 355
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 159/426 (37%), Positives = 253/426 (59%), Gaps = 35/426 (8%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G VHGL+ R G +D+ + S+I +YG+ G
Sbjct: 153 GKCVHGLILRIGLQFDLYVATSLIILYGKCG----------------------------- 183
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
EI +A ++F+ M +D SW ++ G++ G ++ ++ +F MP ++ V+WT +ISG+
Sbjct: 184 --EINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGY 241
Query: 307 VNNEQYEEAFRWFIEMLRKD--VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
+ ++A F EM+++D VRPN +T+ SVL A A +TL +G QIH +M + S
Sbjct: 242 SQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNS 301
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIF--TNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+ S+ +L ++Y+KCG++VDA F N +E+N++++N+MI+ +A G G +A++ FR+
Sbjct: 302 NASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFRE 361
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
M G+ P+ ITF +LS C+H GLV+ G YF M T Y+I P EHYAC+ D+LGRAG
Sbjct: 362 MIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAG 421
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
LAEA L+ M P +WG+LL A R H NL++A+ AA+ L LEP++ YV+LS+
Sbjct: 422 RLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSN 481
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQT 602
+Y+ G+ ++ +++R K + +KSPGCSWI + K H+FL G S KEI + L+
Sbjct: 482 MYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEA 541
Query: 603 ISKGTK 608
+ + K
Sbjct: 542 LPEKMK 547
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 119/230 (51%), Gaps = 8/230 (3%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D + +LI Y K G +A ++F+ M +DV +W +++ GY K G + A IF++MP
Sbjct: 168 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP 227
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR--GGMAFNSITLTILFEACGRFFRYREG 187
+N+V+WT M+ GY + + LF M + G+ N +T+ + AC + G
Sbjct: 228 WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG 287
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK--RDAVSWNSLISGYV 245
Q+H L R G + + + ++ MY + G + +A F +++ ++ ++WN++I+ Y
Sbjct: 288 RQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYA 347
Query: 246 HNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
G +A F M D +++T +++G S G ++ ++ FN M
Sbjct: 348 SYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM 397
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 33/153 (21%)
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T VL +S ++ G +H ++++ ++ D+ + SL+ LY KCG + DA ++F N
Sbjct: 135 FTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDN 194
Query: 392 ---------------------IDE----------RNIVSYNSMISGFAQNGLGEEALNLF 420
ID RNIVS+ +MISG++Q+GL ++AL+LF
Sbjct: 195 MTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLF 254
Query: 421 RKM--KDEGLVPNQITFLSVLSACNHVGLVEEG 451
+M +D G+ PN +T +SVL AC + +E G
Sbjct: 255 DEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG 287
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 15/266 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R +S+NA++ + C I A IF MP RN VS+ MI+G+ + G+ +A L
Sbjct: 195 MTIRDVSSWNALLAGYTKSGC-IDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSL 253
Query: 61 YVNMPARWRDSVCSN-----ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG---- 111
+ M + V N +++ ++ E +I E + + S++
Sbjct: 254 FDEM-VKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 312
Query: 112 YCKKGRVIEAREIFDKM--PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI 169
Y K G +++AR FDK+ EKN++AW M+ Y F M + G+ + I
Sbjct: 313 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 372
Query: 170 TLTILFEACGRFFRYREGVQ-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
T T L C G++ + + + + + + + + GR G + EA+K+
Sbjct: 373 TFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGE 432
Query: 229 MSKRDAVS-WNSLISGYVHNGEIEEA 253
M S W SL++ + +E A
Sbjct: 433 MPMPAGPSIWGSLLAACRKHRNLEMA 458
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 303/534 (56%), Gaps = 50/534 (9%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM--VEK 100
A++ + + G A +L+ MP R + N +ISGY K G +EA R+F M EK
Sbjct: 139 AIMGIYAKYGCIELARKLFDEMPDR--TAADWNVIISGYWKCGNEKEATRLFCMMGESEK 196
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
+V+ W +MV G+ K + AR FD+MPE+ V +W AM+ GY + ++ LF M
Sbjct: 197 NVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRLFDDML 256
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G + T + +C S G D L SI+ R+ F
Sbjct: 257 SSGNEPDETTWVTVLSSC----------------SSLG---DPCLAESIVRKLDRMNF-- 295
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG-KDFVSWTTMITGFSSKG 279
+ + +L+ + G +E A ++FE++ K+ V+W MI+ ++ G
Sbjct: 296 ----------RSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVG 345
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVL 338
+L + +LFN MPE++ V+W ++I+G+ N + +A + F EM+ KD +P+++T+ SV
Sbjct: 346 DLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVF 405
Query: 339 SASAATATLNQG----SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
SA L G S +H + +K++ +S NSL+ +Y +CG++ DA F +
Sbjct: 406 SACGHLGRLGLGNWAVSILHENHIKLS----ISGYNSLIFMYLRCGSMEDARITFQEMAT 461
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+++VSYN++ISG A +G G E++ L KMK++G+ P++IT++ VL+AC+H GL+EEG+
Sbjct: 462 KDLVSYNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTACSHAGLLEEGWKV 521
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F+S+K P +HYACM+D+LGR G L EA+ LI SM EP G++G+LL A H
Sbjct: 522 FESIKV-----PDVDHYACMIDMLGRVGKLEEAVKLIQSMPMEPHAGIYGSLLNATSIHK 576
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
++L +LAA L ++EP ++ YV+LS++Y++ G+ +D ++VR K + + ++K+
Sbjct: 577 QVELGELAAAKLFKVEPHNSGNYVLLSNIYALAGRWKDVDKVRDKMRKQGVKKT 630
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 182/366 (49%), Gaps = 52/366 (14%)
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT-----LTILFEA 177
IF NV +T M+ Y ++ + +S+ + +N I +L ++
Sbjct: 57 HIFRAATYPNVHVFTCMLKYYSQIGATTQ---VVVSLFKHMQYYNDIKPYTSFYPVLIKS 113
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
G+ G+ +H + + G +D + N+I+ +Y + G ++ A K+F M R A W
Sbjct: 114 AGK-----AGMLLHAYLLKLGHSHDHHVRNAIMGIYAKYGCIELARKLFDEMPDRTAADW 168
Query: 238 NSLISGYVHNGEIEEAYRLFERM--PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
N +ISGY G +EA RLF M K+ ++WTTM+TG + NLE + F+ MPE+
Sbjct: 169 NVIISGYWKCGNEKEATRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERR 228
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
+W A++SG+ + +E R F +ML P++ T +VLS+ ++ I
Sbjct: 229 VASWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVR 288
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI----------------------- 392
+ +MN S+ ++ +L+ +++KCGN+ A +IF +
Sbjct: 289 KLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLS 348
Query: 393 ---------DERNIVSYNSMISGFAQNGLGEEALNLFRKM---KDEGLVPNQITFLSVLS 440
ERN VS+NSMI+G+AQNG +A+ LF++M KD P+++T +SV S
Sbjct: 349 LARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSK--PDEVTMVSVFS 406
Query: 441 ACNHVG 446
AC H+G
Sbjct: 407 ACGHLG 412
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 193/615 (31%), Positives = 318/615 (51%), Gaps = 54/615 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP R+ S+ A++ G+V EA L+ M ++S LK
Sbjct: 47 ARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSVALKA- 105
Query: 86 RCEEAARI-----FEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
C +++ I A EK V +++D Y + G++ ++ +F +MP +N V
Sbjct: 106 -CGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRNSVT 164
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
WTA + G + +G F M R ++ ++ I +AC + + G ++H V
Sbjct: 165 WTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHV 224
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
GF + + NS+ TMY G M + ++F MS+RD V W SLI+ Y+ G+ E+A
Sbjct: 225 IVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEEKAV 284
Query: 255 RLF-------------------------------ERMPGKDF---------VSWTTMITG 274
F E++ G F VS +M+
Sbjct: 285 NTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVS-NSMMKM 343
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
+S+ L+ + LF M +D ++W+ II G+ EE F++F M + +P L
Sbjct: 344 YSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFAL 403
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+S+LS S A L QG Q+HA + + +E + +I+++L+++YSKCG++++A ++F D
Sbjct: 404 ASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEEKDR 463
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+IVS +MI+G+A++G EEA++LF K P+ +TF+SVL+AC+H G ++ GF Y
Sbjct: 464 TDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQY 523
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F M+ YN+ P EHY CMVD+L RAG L +A +IN M ++ VW LL A +
Sbjct: 524 FNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKG 583
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+++ + AAQ ++EL+P S T V L++++S G ++ VR K K + K PG S I
Sbjct: 584 DVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSKGVIKEPGWSSI 643
Query: 575 ILKDKVHLFLAGRKS 589
++KD+V F +G S
Sbjct: 644 LIKDQVSAFASGSLS 658
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 217/442 (49%), Gaps = 47/442 (10%)
Query: 92 RIFEAMVEKDV----VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
R A +EK + V S + G++ AR++FDKMP +++ +WTA++ GY+
Sbjct: 14 RFCTASIEKSMHSNHVDTHSQLQDLIDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAAT 73
Query: 148 CFEDGFDLFLSMRRG--GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
E+ LF +MR G++ ++ L++ +ACG+ G +H + + +
Sbjct: 74 KPEEALILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFV 133
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP---- 261
G++++ MY R+G +D++ +VF+ M R++V+W + I+G VH G E R F +M
Sbjct: 134 GSALLDMYMRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQ 193
Query: 262 -----------------------GKDF-----------VSWT--TMITGFSSKGNLEKSI 285
G++ + W ++ T ++ G ++ +
Sbjct: 194 LSSDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGL 253
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
LF M E+D V WT++I+ ++ Q E+A F+ M V PN+ T +S +A A+ +
Sbjct: 254 RLFESMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLS 313
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
L G Q+H +V + + +S+ NS++ +YS C + A +F + R+I+S++++I
Sbjct: 314 RLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIG 373
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G++Q GEE F M+ G P S+LS + ++E+G ++ +E
Sbjct: 374 GYSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGR-QVHALALYLGLE 432
Query: 466 PGPEHYACMVDILGRAGSLAEA 487
P + ++++ + GS+ EA
Sbjct: 433 QNPTIRSALINMYSKCGSIIEA 454
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 197/498 (39%), Gaps = 114/498 (22%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD------------ 70
I ++ +FA MP RN+V++ A ITG V G+ YE + M +R++
Sbjct: 147 IDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQM-SRFKQLSSDTFAFAIAL 205
Query: 71 SVC---------------------------SNALISGYLKVGRCEEAARIFEAMVEKDVV 103
C +N+L + Y + G ++ R+FE+M E+DVV
Sbjct: 206 KACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVV 265
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
W S++ Y + G+ E + FL MR
Sbjct: 266 LWTSLITAYIRIGQE-------------------------------EKAVNTFLLMRNSQ 294
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
++ N T F AC R G Q+HG V G + + NS++ MY +D A+
Sbjct: 295 VSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSAS 354
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE--RMPGKDFVSW------------- 268
+F M RD +SW+++I GY EE ++ F R G +
Sbjct: 355 VLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMA 414
Query: 269 ------------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIIS 304
+ +I +S G++ ++ ++F D V+ TA+I+
Sbjct: 415 VLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMIN 474
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ-IHAHVVKMNME 363
G+ + + EEA F + L+ RP+ +T SVL+A + + L+ G Q + NM
Sbjct: 475 GYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMR 534
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+V L + G + DA ++ + +++ V + +++ + G E ++
Sbjct: 535 PAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQR 594
Query: 423 MKDEGLVPNQITFLSVLS 440
+ + L P T L L+
Sbjct: 595 ILE--LDPTSFTTLVTLA 610
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 176/479 (36%), Positives = 258/479 (53%), Gaps = 38/479 (7%)
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
SM R G+ +SIT + L + C REG +VH + G+ L N +I MY +
Sbjct: 275 SMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFN 334
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE------RMPG--------- 262
++EA +F M +R+ VSW ++IS Y + + A RL MP
Sbjct: 335 LLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLR 394
Query: 263 --------KDFVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
K SW + +I +S G L +++++F M D V W +
Sbjct: 395 ACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNS 454
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
II+ F + +EA + M R +Q TL+SVL A + + L G Q H HV+K
Sbjct: 455 IIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKF- 513
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ D+ + N+L+ +Y KCG++ DA IF + +++++S+++MI+G AQNG EALNLF
Sbjct: 514 -DQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFE 572
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
MK +G PN IT L VL AC+H GLV EG+ YF+SM LY I+PG EHY CM+D+LGRA
Sbjct: 573 SMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRA 632
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
L + + LI+ M EP W LL A R N+DLA AA+ +++L+P YV+LS
Sbjct: 633 EKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLS 692
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTL 600
++Y++ + D VR K + IRK PGCSWI + ++H F+ G KS + EI L
Sbjct: 693 NIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQL 751
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 166/356 (46%), Gaps = 31/356 (8%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNAL-ISGYLK 83
EA +F MP RN VS+ MI+ + + A L M +RD V N S L+
Sbjct: 338 EAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFM---FRDGVMPNMFTFSSVLR 394
Query: 84 VGRCEE-------AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
CE + I + +E DV +++D Y K G ++EA ++F +M + V W
Sbjct: 395 A--CERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVW 452
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+++ + + ++ L+ SMRR G + TLT + AC G Q H V
Sbjct: 453 NSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAH--VHV 510
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
FD D+IL N+++ MY + G +++A +F+ M+K+D +SW+++I+G NG EA L
Sbjct: 511 LKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNL 570
Query: 257 FERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMM-------PEKDDVTWTAIISG 305
FE M P + ++ ++ S G + + F M P ++ + ++
Sbjct: 571 FESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREH--YGCMLDL 628
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
E+ ++ + EM + P+ +T ++L A A ++ + ++K++
Sbjct: 629 LGRAEKLDDMVKLIHEM---NCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLD 681
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-----PARWRD--SVCSN 75
+ EA ++F M ++V + ++I F + EA LY +M PA SV
Sbjct: 434 LLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRA 493
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
L++GR A + ++D++ +++D YCK G + +A+ IF++M +K+V++
Sbjct: 494 CTSLSLLELGR---QAHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVIS 550
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG-VQVHGLV 194
W+ M+ G + + +LF SM+ G N IT+ + AC EG +
Sbjct: 551 WSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMN 610
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANK-VFSMMSKRDAVSWNSLISG 243
+ +G D ++ + GR +D+ K + M + D V+W +L+
Sbjct: 611 NLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDA 660
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 194/612 (31%), Positives = 318/612 (51%), Gaps = 52/612 (8%)
Query: 14 TALIN--NNCSIYEAF-EIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL--YVNMPARW 68
+AL+N CS +A ++F ++ RN V + AM+ GF + G+ E E Y+
Sbjct: 348 SALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQ 407
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREI 124
D ++ S + + ++ M++ ++ ++VD Y K G + EAR+
Sbjct: 408 PDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQ 467
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F+ M + V+W A++ GY++ + ++ F +F M G+ + ++L + AC +
Sbjct: 468 FEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEF 527
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
++G Q H L+ + G D G+S+I MY + G + A VF M R+ VS N+LI+GY
Sbjct: 528 KQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGY 587
Query: 245 VHNGEIEEAYRLFER----------------MPGKD-------------------FVSWT 269
+ +EEA LF+ + G D F+S +
Sbjct: 588 TMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSS 646
Query: 270 TMIT-----GFSSKGNLEKSIELFNMMP-EKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
M+ + + S LF+ + K V WTA+ISG+ +E+A +++ M
Sbjct: 647 EMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMR 706
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
++ P+Q T +SVL A A ++L G ++H+ + D +SL+ +Y+KCG+V
Sbjct: 707 SDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVK 766
Query: 384 DAYRIFTNIDERN-IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ ++F + RN ++S+NSMI G A+NG EEAL +F++M+ + ++P+++TFL VLSAC
Sbjct: 767 GSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSAC 826
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
+H G V EG F M Y ++P +H CMVDILGR G L EA + IN + + P +
Sbjct: 827 SHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPML 886
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
W LLGA R H + K AA LMEL+P S++ YV+LS LY+ + +R + KL
Sbjct: 887 WSTLLGACRKHGDEVRGKRAANKLMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKL 946
Query: 563 KRIRKSPGCSWI 574
K ++K PG SWI
Sbjct: 947 KGVKKLPGYSWI 958
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 205/390 (52%), Gaps = 17/390 (4%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+VD Y K G V A++ F ++ +K+V AW +++ Y+ F F+ M G+ N
Sbjct: 82 IVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPN 141
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T ++ AC G QVH V + GF + +I MY + + +A VF
Sbjct: 142 EFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFD 201
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEK 283
D VSW +LI+GYV +G EA ++F++M D ++ T+I + + G L
Sbjct: 202 GALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLAD 261
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ +LF +P + V W +ISG EEA +F+E+ + ++ + +L SVLSA A+
Sbjct: 262 ARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIAS 321
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+ LN GS +HA +K ++ +V + ++LV++Y+KC + A ++F ++ ERNIV +N+M
Sbjct: 322 LSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAM 381
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG------FIYFKS 457
+ GFAQNGL +E + F MK G P++ TF S+ SAC + ++ G I K
Sbjct: 382 LGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKF 441
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
L+ +VD+ ++G+L EA
Sbjct: 442 TSNLFVANA-------LVDMYAKSGALKEA 464
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 147/589 (24%), Positives = 275/589 (46%), Gaps = 64/589 (10%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW----RDSVCS--NA 76
+ +A ++F +P N V++ MI+G +RG EA ++ + R S+ S +A
Sbjct: 259 LADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSA 318
Query: 77 LIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+ S L G A I E + + +V ++V+ Y K ++ A+++F+ + E+N+V
Sbjct: 319 IASLSMLNYGSMVHAQAIKEGL-DDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVL 377
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W AM+ G+ + ++ + F M+R G + T T +F AC G Q+H ++
Sbjct: 378 WNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMI 437
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ F ++ + N+++ MY + G + EA K F M D VSWN++I GYV +EA+
Sbjct: 438 KNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFF 497
Query: 256 LFERMPGK----DFVSWTTMITGFSS---------------KGNLEKSI----------- 285
+F RM D VS ++++ ++ K L+ S
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYV 557
Query: 286 ---------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
++F MP ++ V+ A+I+G+ + EEA F E+ ++P ++T +
Sbjct: 558 KCGVVLAARDVFYSMPYRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAG 616
Query: 337 VLSASAATATLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-E 394
+L LN G QIH V+K + S + SL+ +Y D+ +F+ +
Sbjct: 617 LLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYP 676
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-I 453
+ +V + ++ISG+AQ E+AL ++ M+ + ++P+Q TF SVL AC + ++ G +
Sbjct: 677 KGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEV 736
Query: 454 YFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA-- 509
+ T +N+ + C ++D+ + G + ++ + + M W +++
Sbjct: 737 HSLIFHTGFNM----DEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLA 792
Query: 510 --GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
G L++ K Q + PD T VLS S G+ +G +V
Sbjct: 793 KNGYAEEALEIFKQMEQQ--SIIPDEVTFLGVLSAC-SHAGRVSEGRKV 838
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 212/473 (44%), Gaps = 83/473 (17%)
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
G ++D Y K + +AR +FD + V+WT ++ GY++ DGF +
Sbjct: 181 GGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVR-----DGFPM---------- 225
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
E V+V + R G D I ++I Y LG + +A K+
Sbjct: 226 --------------------EAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKL 265
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-------------------ERMPGKDFV 266
F+ + + V+WN +ISG+ G EEA F + +
Sbjct: 266 FTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSML 325
Query: 267 SWTTMITGFSSKGNLEKSI--------------------ELFNMMPEKDDVTWTAIISGF 306
++ +M+ + K L+ ++ ++FN + E++ V W A++ GF
Sbjct: 326 NYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N +E +F M R +P++ T +S+ SA A+ L+ G Q+H ++K S++
Sbjct: 386 AQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNL 445
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ N+LV +Y+K G + +A + F + + VS+N++I G+ Q +EA +FR+M
Sbjct: 446 FVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSN 505
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC----MVDILGRAG 482
G++P++++ S++SAC +V ++G + L ++ G + C ++D+ + G
Sbjct: 506 GVLPDEVSLASIVSACANVKEFKQG----QQCHCLL-VKVGLDTSTCAGSSLIDMYVKCG 560
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
+ A D+ SM + + + G +HL + ++ L+P T
Sbjct: 561 VVLAARDVFYSMPYRNVVSINALIAGYTMSHLEEAIHLFQEIQMVGLKPTEVT 613
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 155/362 (42%), Gaps = 82/362 (22%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + G +LGN I+ +Y + G +D A K FS + K+D +WNS++S Y+ +G
Sbjct: 63 IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122
Query: 250 IEEAYRLFERM------P-------------------------------GKDFVSWTT-- 270
+ F M P G F S+
Sbjct: 123 FATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGG 182
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I ++ NL + +F+ D V+WT +I+G+V + EA + F +M R P+
Sbjct: 183 LIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPD 242
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
Q+ L +V++A Y G + DA ++FT
Sbjct: 243 QIALVTVINA-----------------------------------YVALGRLADARKLFT 267
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
I N+V++N MISG A+ G EEA++ F ++K GL + + SVLSA + ++
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327
Query: 451 G-FIYFKSMKTLY--NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
G ++ +++K N+ G + +V++ + + A + NS+ E +W A+L
Sbjct: 328 GSMVHAQAIKEGLDDNVYVG----SALVNMYAKCSKMDAAKQVFNSLG-ERNIVLWNAML 382
Query: 508 GA 509
G
Sbjct: 383 GG 384
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 11/122 (9%)
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
A L+ IH+ +K+ + + N +V LY KCGNV A + F+ ++++++ ++N
Sbjct: 52 AVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWN 111
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----------HVGLVEE 450
S++S + +GL + F M + G+ PN+ TF VLSAC+ H G+ +
Sbjct: 112 SVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKM 171
Query: 451 GF 452
GF
Sbjct: 172 GF 173
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 319/619 (51%), Gaps = 53/619 (8%)
Query: 16 LINNNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW-----R 69
++ NC + +A +F MP R+ VS+ +I G + EA Y M R
Sbjct: 53 MLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNL 112
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKD--VVAWGSMVDGYCKKGRVIEAREIFDK 127
SV S IS L+ + V D V ++VD Y K G V ++F++
Sbjct: 113 VSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNE 172
Query: 128 MPEKNVVAWTAMVDGY-MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
EKN V+W ++++G K C+ D + F M G NS+T++ + ++
Sbjct: 173 TVEKNEVSWNSIINGLACKGRCW-DALNAFRMMIDAGAQPNSVTISSILPVLVELECFKA 231
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G ++HG R G + DI + NS+I MY + G EA+ +F + +R+ VSWN++I+ Y
Sbjct: 232 GKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYAL 291
Query: 247 NGEIEEAYRLFERM--------------------------PGKD--------------FV 266
N EA R +M PGK+ FV
Sbjct: 292 NRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFV 351
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
S ++I ++ G L + +FN KD+V++ +I G+ + ++ F EM
Sbjct: 352 S-NSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLG 409
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+P+ ++ V+SA A A L QG ++H ++ ++ S + + NSL+ Y+KCG + A
Sbjct: 410 KKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIAC 469
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
R+F I +++ S+N+MI G+ G E A+++F M+D+ + + +++++VLSAC+H G
Sbjct: 470 RLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGG 529
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
LVE G+ YF M +EP HY CMVD+LGRAG + EA LI + P +WGAL
Sbjct: 530 LVERGWQYFSEMLA-QRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGAL 588
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
LGA R + N++L + AA+HL EL+P Y++LS++Y+ G+ + N++R K + +
Sbjct: 589 LGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAK 648
Query: 567 KSPGCSWIILKDKVHLFLA 585
K+PGCSW+ + D+VH F+A
Sbjct: 649 KNPGCSWVQIYDQVHAFVA 667
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 184/375 (49%), Gaps = 41/375 (10%)
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M R G+ + T + + C F +G++VHG+V + GFD D+ +GN+++ +YG GF
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF--------------------- 257
+++A ++F M +RD VSWN++I NG+ EA +
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 258 -------ERMPGK------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT 298
E M + + ++ + G+++ ++FN EK++V+
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W +II+G + +A F M+ +PN +T+SS+L G +IH +
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+M E+D+ I NSL+ +Y+K G+ +A IF N+D RNIVS+N+MI+ +A N L EA+
Sbjct: 241 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR 300
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
+M++ G PN +TF +VL AC +G + G +M + ++D+
Sbjct: 301 FVIQMQETGECPNAVTFTNVLPACARLGFLGPG-KEIHAMGVRIGLTSDLFVSNSLIDMY 359
Query: 479 GRAGSLAEAIDLINS 493
+ G L A ++ N+
Sbjct: 360 AKCGCLHSARNVFNT 374
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 217/465 (46%), Gaps = 56/465 (12%)
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV--DCFE 150
+F+ + DV +++ Y G + +AR +FD+MPE++VV+W ++ G + V D E
Sbjct: 36 VFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTII-GLLSVNGDYTE 94
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
F + R + N +++ L ++H + G D + N+++
Sbjct: 95 ARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALV 154
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM---------- 260
YG+ G + +VF+ +++ VSWNS+I+G G +A F M
Sbjct: 155 DAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSV 214
Query: 261 ----------------PGKDFVSWT-------------TMITGFSSKGNLEKSIELFNMM 291
GK+ ++ ++I ++ G+ ++ +F+ +
Sbjct: 215 TISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNL 274
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
++ V+W A+I+ + N EA R+ I+M PN +T ++VL A A L G
Sbjct: 275 DRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGK 334
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
+IHA V++ + SD+ + NSL+ +Y+KCG + A +F N ++ VSYN +I G+++
Sbjct: 335 EIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF-NTSRKDEVSYNILIIGYSETD 393
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
++LNLF +M+ G P+ ++F+ V+SAC ++ +++G K ++ + Y
Sbjct: 394 DCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQG-------KEVHGVALRNHLY 446
Query: 472 A------CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
+ ++D + G + A L N + F+ +LG G
Sbjct: 447 SHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYG 491
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/549 (21%), Positives = 217/549 (39%), Gaps = 121/549 (22%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATM----PMRNAVSYAAMITGFVRRGMFYEAE 58
++ S+N++I L ++A F M N+V+ ++++ V F +
Sbjct: 175 EKNEVSWNSIINGLACKG-RCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGK 233
Query: 59 ELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
E++ + M D +N+LI Y K G EA+ IF + +++V+W +M+ Y
Sbjct: 234 EIHGFSMRMGTE-TDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYA-- 290
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
+++P + + + M+ G N++T T +
Sbjct: 291 ---------LNRLPLEAI--------------------RFVIQMQETGECPNAVTFTNVL 321
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
AC R G ++H + R G D+ + NS+I MY + G + A VF+ S++D V
Sbjct: 322 PACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEV 380
Query: 236 SWNSLISGYVHNGEIEEAYRLFE--RMPGK--DFVSWTTMITG----------------- 274
S+N LI GY + ++ LF R+ GK D VS+ +I+
Sbjct: 381 SYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVA 440
Query: 275 ------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
++ G ++ + LFN + KD +W +I G+ + E A
Sbjct: 441 LRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAI 500
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
F M V+ + ++ +VLSA + + +G Q + ++ +E
Sbjct: 501 SMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEP------------ 548
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+ Y M+ + G EEA L +++ + P+ +
Sbjct: 549 -------------------TEMHYTCMVDLLGRAGFVEEAAKLIQQLP---IAPDANIWG 586
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP-EHYACMVDILGRAGSLAEA---IDLIN 492
++L AC G VE G ++ + L+ ++P +Y + +I G EA +L+
Sbjct: 587 ALLGACRIYGNVELG---RRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMK 643
Query: 493 SMTFEPPPG 501
S + PG
Sbjct: 644 SRGAKKNPG 652
>gi|308044597|ref|NP_001182884.1| uncharacterized protein LOC100501159 [Zea mays]
gi|238007964|gb|ACR35017.1| unknown [Zea mays]
Length = 580
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/570 (31%), Positives = 306/570 (53%), Gaps = 48/570 (8%)
Query: 43 AMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDV 102
AM+ G+ + G A EL+ MP ++ V +++SGY + GR +EA +F+ M E++
Sbjct: 33 AMLDGYAKAGRVDRARELFDAMPV--KNVVTWTSMVSGYFRAGRVQEARELFDVMPERND 90
Query: 103 VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG 162
+W ++V GY + G + EARE+FD+MP++NVVAWTAMV Y+ + ++LF M
Sbjct: 91 YSWTTVVQGYARNGMLREAREMFDRMPQRNVVAWTAMVKAYVDCGQIQQAWELFDMM--- 147
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
R + + N++I+ + +G + EA
Sbjct: 148 -------------------------------PERNSYSW-----NAMISGFLSIGKVAEA 171
Query: 223 NKVFSMMSKR--DAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
++F M R + VSW ++++G +NG A F+RMP KD +W +IT +++ G
Sbjct: 172 VQLFERMPHRHKNVVSWTTMVAGLANNGLACRAREFFDRMPAKDTAAWNAIITVYANNGQ 231
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
L ++ LF+ M KD VTW+ II + NE+ EA F+ M V PN TL S+L
Sbjct: 232 LNEAQRLFDSMLAKDLVTWSTIIEAYSKNERKHEALNMFLLMRHSAVSPNIRTLISILVI 291
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
S +T + QIH V+ + S+ S+ N+L+++YS+ G+++ A+ F +++++ +++
Sbjct: 292 SESTVEVK---QIHGLVIALGFLSETSLGNALLTMYSRSGDLMSAWFAFKRLEQKDAITW 348
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
S++ FA +G G AL F +M G P+ TF +VLSAC HVGLV +G FKS+
Sbjct: 349 TSIVQAFADHGCGYHALLGFAQMLRHGYKPSSTTFTAVLSACRHVGLVGKGRKMFKSIYH 408
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE-PPPGVWGALLGAGRTHLNLDLA 519
+Y +EP EHY+C+VD+LGRAG + EA +L++ M + LLGA H +++A
Sbjct: 409 VYGLEPTIEHYSCLVDLLGRAGYVREAKELVDGMQQGMRDEAILATLLGACVVHNEVEVA 468
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
+ + L+ +P Y +L+++++ G + V + + +++PG S I + +
Sbjct: 469 REVGEDLVRFDPSGTGGYRLLANVFASHGMWDETANVWKVMRGSKAKRTPGFSQIEVNMR 528
Query: 580 VHLFLAGRKSCLDLKEI-EVTLQTISKGTK 608
H+F + + EI E+ + TI+ K
Sbjct: 529 NHVFYSRDQEHPQCAEIYEMLIDTIAPQMK 558
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 142/277 (51%), Gaps = 4/277 (1%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R ++ AM+ A ++ I +A+E+F MP RN+ S+ AMI+GF+ G EA +L
Sbjct: 116 MPQRNVVAWTAMVKAYVDCG-QIQQAWELFDMMPERNSYSWNAMISGFLSIGKVAEAVQL 174
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP R ++ V +++G G A F+ M KD AW +++ Y G++ E
Sbjct: 175 FERMPHRHKNVVSWTTMVAGLANNGLACRAREFFDRMPAKDTAAWNAIITVYANNGQLNE 234
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A+ +FD M K++V W+ +++ Y K + + ++FL MR ++ N TL +
Sbjct: 235 AQRLFDSMLAKDLVTWSTIIEAYSKNERKHEALNMFLLMRHSAVSPNIRTLISILVISES 294
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ Q+HGLV GF + LGN+++TMY R G + A F + ++DA++W S+
Sbjct: 295 TVEVK---QIHGLVIALGFLSETSLGNALLTMYSRSGDLMSAWFAFKRLEQKDAITWTSI 351
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSS 277
+ + +G A F +M + +T T S
Sbjct: 352 VQAFADHGCGYHALLGFAQMLRHGYKPSSTTFTAVLS 388
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/546 (32%), Positives = 298/546 (54%), Gaps = 47/546 (8%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D++ +++ Y K G VI AR +FD+M ++N+V+W+A++ GY + +LF MR
Sbjct: 37 DIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMR 96
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+ N + AC +G+QVH + G + N++I+MY + G
Sbjct: 97 ---IVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCT 153
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS------------- 267
+A V ++MS+ +AVS+N+LI+G+V N + E+ F+ M K F
Sbjct: 154 DALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICT 213
Query: 268 -----WTTM---------------------ITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
W M IT +S +E++ ++F ++ EKD ++W
Sbjct: 214 SYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNT 273
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+++ + +E A R F +ML V+P+ T + VL+A A A++ G QIH H+++
Sbjct: 274 LVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRT 333
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
DV + N+LV++Y+KCG++ ++Y +F +RN+VS+N++I+ F +GLG AL F
Sbjct: 334 RQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHF 393
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
KMK G+ P+ +TF+ +L+ACNH GLVEEG +YF SM+ Y I P EH++C++D+LGR
Sbjct: 394 EKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGR 453
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA + + + F P + G+LL A R H ++ + + A L++L+P + +PYV+L
Sbjct: 454 AGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLL 513
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKR--IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEV 598
S+LY+ + G K LK ++K PG S I + F G S ++EI+
Sbjct: 514 SNLYA--SDEMWGGVAEAWKMLKYSGLKKEPGHSLIDVMGMFEKFTMGDLSHSRIEEIKD 571
Query: 599 TLQTIS 604
T++ ++
Sbjct: 572 TIKMLN 577
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 190/406 (46%), Gaps = 51/406 (12%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
L C + + G+ +H + G DII+ N +I +Y + G + A ++F MS R+
Sbjct: 9 LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERM---PGK--------------------------- 263
VSW+++ISGY G+ A LF +M P +
Sbjct: 69 LVSWSAIISGYDQTGQPLLALNLFSQMRIVPNEYVFASVISACASLTALSQGLQVHAQSL 128
Query: 264 -------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
FVS +I+ + G ++ + N+M E + V++ A+I+GFV N+Q E+
Sbjct: 129 KLGCVSVSFVS-NALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGI 187
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
F M +K P++ T S +L + +G Q+H ++K+N+E I N ++++Y
Sbjct: 188 EAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMY 247
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITF 435
SK + +A ++F I E++++S+N++++ E AL +FR M D V P+ TF
Sbjct: 248 SKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTF 307
Query: 436 LSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
VL+AC + + G I+ ++T + G + +V++ + GS+ + D+
Sbjct: 308 AGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSN--ALVNMYAKCGSIKNSYDVFRR- 364
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE-----PDSAT 535
T + W ++ A H L A +H +++ PDS T
Sbjct: 365 TSDRNLVSWNTIIAAFGNH---GLGARALEHFEKMKTVGIHPDSVT 407
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 80/128 (62%), Gaps = 4/128 (3%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
+ S+L A G +HA +K M SD+ + N +++LYSKCGNV+ A R+F +
Sbjct: 5 AIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEM 64
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+RN+VS++++ISG+ Q G ALNLF +M+ +VPN+ F SV+SAC + + +G
Sbjct: 65 SDRNLVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGL 121
Query: 453 -IYFKSMK 459
++ +S+K
Sbjct: 122 QVHAQSLK 129
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 43/304 (14%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M++ + SYNA+I + N + E F M + + +++ ++ F+
Sbjct: 162 MSEPNAVSYNALIAGFVENQ-QPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWR 220
Query: 57 AEELYVNM-PARWRDSV-CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+L+ M DS N +I+ Y K EEA ++F + EKD+++W ++V C
Sbjct: 221 GMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACC- 279
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVD-GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
F K E+ + + M+D ++K D F T
Sbjct: 280 ----------FCKDHERALRVFRDMLDVCFVKPDDF--------------------TFAG 309
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ AC R G Q+HG + R D+ + N+++ MY + G + + VF S R+
Sbjct: 310 VLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRN 369
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFN 289
VSWN++I+ + ++G A FE+M D V++ ++T + G +E+ FN
Sbjct: 370 LVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFN 429
Query: 290 MMPE 293
M E
Sbjct: 430 SMEE 433
>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 289/540 (53%), Gaps = 45/540 (8%)
Query: 100 KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM 159
+DV +M++ Y K G + A ++FD+M +++V+WT+++ GY+ + F GF LF M
Sbjct: 183 QDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKM 242
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
R M NS+T+ ++ +AC F EG ++H V + GF D + NSI+ MY + G
Sbjct: 243 RME-MEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGS 301
Query: 220 -DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK--------------- 263
+E FS + +RD +SWN LI+ Y G+I E F M +
Sbjct: 302 GEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRREVTSSIESLTLVVSAI 361
Query: 264 ----------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
D V T ++ ++ G LE S +LF +P ++ +TW++
Sbjct: 362 ANCANLSEGGMLHCSAIKTGLHDTVLMTCLLALYAKCGALEISAQLFRDIPHRNSITWSS 421
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
++SGF N ++EA + +ML ++PN +S+++ A L G HA ++ N
Sbjct: 422 MMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIR-N 480
Query: 362 M-----ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+ E ++ SL+++Y +CG++ A F + +++V++ SMI GF +GL EA
Sbjct: 481 LSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEGFGTHGLAFEA 540
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L F+ M + + PN +TFLS+LSAC+H GLV EG F SMK + IEP HY CMVD
Sbjct: 541 LKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPDLNHYTCMVD 600
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+LGR+G L EA+ +I + P +WGALL A R H + L + AA+ L+ELEPD+
Sbjct: 601 LLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKLLELEPDNVGY 660
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
Y + S++ + + + + VR + ++K PG S I +K +H F++G S ++EI
Sbjct: 661 YTLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMIHGFVSGDTSHHQVEEI 720
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 230/485 (47%), Gaps = 57/485 (11%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A I + E N V W +++ ++ F + MR G+A +S T I+ +A
Sbjct: 102 AFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWS 161
Query: 181 F-FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
R G VH + + GF D+ GN+++ +Y + G + A+K+F M+ RD VSW S
Sbjct: 162 LGCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTS 221
Query: 240 LISGYVHNGEIEEAYRLFERM-------------------------PGKDFVSWT----- 269
+ISGY++ ++LF +M G++ S+
Sbjct: 222 IISGYIYGESFSRGFKLFNKMRMEMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGF 281
Query: 270 --------TMITGFSSKGNLEKSIE-LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
+++ ++ G + +E F+ + E+D ++W +I+ + E F
Sbjct: 282 MVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFN 341
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
EM R++V + +L+ V+SA A A L++G +H +K + D + L++LY+KCG
Sbjct: 342 EM-RREVTSSIESLTLVVSAIANCANLSEGGMLHCSAIKTGLH-DTVLMTCLLALYAKCG 399
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+ + ++F +I RN ++++SM+SGF QNG +EA+ L+++M GL PN +++
Sbjct: 400 ALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVI 459
Query: 441 ACNHVGLVEEGFIYFKSMKTLY--NIEPGPEHYAC-----MVDILGRAGSLAEAIDLINS 493
A H+G ++ G K+ + N+ PE + ++++ R GS++ A+ N
Sbjct: 460 AYTHLGALQLG----KATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNR 515
Query: 494 MTFEPPPGVWGALLGAGRTH-LNLDLAKLAAQHL-MELEPDSATPYVVLSDLYSVIGKKR 551
+ + W +++ TH L + K L E++P+S T +LS S G R
Sbjct: 516 VVVKDVV-TWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSAC-SHSGLVR 573
Query: 552 DGNRV 556
+G V
Sbjct: 574 EGCEV 578
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 29/315 (9%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA---RWRDSVCSNALIS----G 80
++F +P RN++++++M++GF + G F EA ELY M A + + S +I+ G
Sbjct: 406 QLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLG 465
Query: 81 YLKVGRCEEA--ARIFEAMVEKDVVAW-GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
L++G+ A R + E+D S+++ Y + G + A F+++ K+VV WT
Sbjct: 466 ALQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWT 525
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV-HGLVSR 196
+M++G+ + F SM + NS+T L AC REG +V H +
Sbjct: 526 SMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWG 585
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGY-VHN----GEI 250
F + D+ ++ + GR G + EA + +++ D+ W +L++ VH GE
Sbjct: 586 FRIEPDLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEY 645
Query: 251 EEAYRLFERMPGKD--FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI-----I 303
A +L E P + W+ + G +E+ + + K W+ I I
Sbjct: 646 -AAEKLLELEPDNVGYYTLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMI 704
Query: 304 SGFV----NNEQYEE 314
GFV ++ Q EE
Sbjct: 705 HGFVSGDTSHHQVEE 719
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+ +IT +S + + + N E + V W +II V++ + A + M V
Sbjct: 87 SKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVA 146
Query: 329 PNQLTLSSVLSAS-AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+ T + A + + G +H +KM DV N+++ +Y KCG++ +A +
Sbjct: 147 HDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASK 206
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + R++VS+ S+ISG+ LF KM+ E + PN +T + +L AC+
Sbjct: 207 LFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKMRME-MEPNSVTMVVMLQACSAFES 265
Query: 448 VEEG 451
V EG
Sbjct: 266 VNEG 269
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 10/194 (5%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
+IHA ++ + +S+ + L++LYS+ + A+ I + +E N V +NS+I +G
Sbjct: 69 RIHASLIVSSGFQPLSVASKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSG 128
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL-VEEG-FIYFKSMKTLYNIEPGPE 469
L AL + +M++ G+ + TF + A +G VE G ++ +MK + G +
Sbjct: 129 LFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMGF----GQD 184
Query: 470 HY--ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA-KLAAQHL 526
Y M+++ + GS+ A L + MT W +++ + KL +
Sbjct: 185 VYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVS-WTSIISGYIYGESFSRGFKLFNKMR 243
Query: 527 MELEPDSATPYVVL 540
ME+EP+S T V+L
Sbjct: 244 MEMEPNSVTMVVML 257
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/554 (30%), Positives = 286/554 (51%), Gaps = 75/554 (13%)
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F + V+AW +++ + F F+ MR G + + ++C
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM------------------------- 219
R G VHG + R G D D+ GN+++ MY +L M
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 220 -----------DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD---- 264
D +VF +M ++D VS+N++I+GY +G E+A R+ M D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 265 ----------FVSWTTMITG-------------------------FSSKGNLEKSIELFN 289
F + +I G ++ +E S +F+
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+ +D ++W ++++G+V N +Y EA R F +M+ V+P + SSV+ A A ATL+
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G Q+H +V++ S++ I ++LV +YSKCGN+ A +IF ++ + VS+ ++I G A
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+G G EA++LF +MK +G+ PNQ+ F++VL+AC+HVGLV+E + YF SM +Y + E
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
HYA + D+LGRAG L EA + I+ M EP VW LL + H NL+LA+ A+ + +
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 541
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ ++ YV++ ++Y+ G+ ++ ++R++ + K +RK P CSWI +K+K H F++G +S
Sbjct: 542 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRS 601
Query: 590 CLDLKEIEVTLQTI 603
+ +I L+ +
Sbjct: 602 HPSMDKINEFLKAV 615
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 182/415 (43%), Gaps = 112/415 (26%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
R+FE M KDVV++ +++ GY + G +ED
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGM-------------------------------YED 225
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
+ M + +S TL+ + + +G ++HG V R G D D+ +G+S++
Sbjct: 226 ALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVD 285
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDF 265
MY + ++++ +VFS + RD +SWNSL++GYV NG EA RLF +M PG
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA-- 343
Query: 266 VSWTTMIT---------------------GFSSK--------------GNLEKSIELFNM 290
V+++++I GF S GN++ + ++F+
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT---- 346
M D+V+WTAII G + EA F EM R+ V+PNQ+ +VL+A +
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Query: 347 ------------LNQGSQIHAHVV-----------------KMNMESDVSIQNSLVSLYS 377
LNQ + +A V KM +E S+ ++L+S S
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Query: 378 KCGNV----VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
N+ A +IFT +D N+ +Y M + +A NG +E L +M+ +GL
Sbjct: 524 VHKNLELAEKVAEKIFT-VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 112/274 (40%), Gaps = 70/274 (25%)
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS---LISGYVHNGEIEEAYRLFERMP 261
L ++I R+ +A ++ + + ++S S +IS Y + + EA LF+ +
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLK 66
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
++W ++I F+ + + +A F+E
Sbjct: 67 SPPVLAWKSVIRCFT-------------------------------DQSLFSKALASFVE 95
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK--- 378
M P+ SVL + L G +H +V++ M+ D+ N+L+++Y+K
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLG 155
Query: 379 ------CGNVVD---------------------------AYRIFTNIDERNIVSYNSMIS 405
GNV D R+F + +++VSYN++I+
Sbjct: 156 MGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIA 215
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G+AQ+G+ E+AL + R+M L P+ T SVL
Sbjct: 216 GYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/548 (33%), Positives = 286/548 (52%), Gaps = 46/548 (8%)
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSITLTILFEAC 178
+AR++FD +P + V W ++ G + E F+ M G + +S TL + A
Sbjct: 176 DARKVFDAVPSPDTVLWNTLLAGLSGSEALEA----FVRMAGAGSVRPDSTTLASVLPAA 231
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G VH + G + +I++Y + G M+ A +F M D V++N
Sbjct: 232 AEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYN 291
Query: 239 SLISGYVHNGEIEEAYRLFERMPG-------KDFVSW----------------------- 268
+LISGY NG + + LF+ + G V+
Sbjct: 292 ALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKA 351
Query: 269 ---------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
T + T + +++ + F+ MPEK +W A+ISG+ N E A F
Sbjct: 352 GLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALF 411
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+M +VRPN LT+SS LSA A L+ G +H + +E +V + +L+ +Y KC
Sbjct: 412 QQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKC 471
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G++ +A IF ++D +N+VS+N MISG+ +G G EAL L++ M D L P TFLSVL
Sbjct: 472 GSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVL 531
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP- 498
AC+H GLV+EG F+SM + Y I PG EH CMVD+LGRAG L EA +LI+
Sbjct: 532 YACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAV 591
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
PG+WGALLGA H + DLAKLA+Q L ELEP++ YV+LS+LY+ + + VR
Sbjct: 592 GPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQ 651
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDW 617
+ K +++ K+PGC+ I + D+ H+F+AG ++ I + L+ ++ E + P +
Sbjct: 652 EAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEA 711
Query: 618 SLLGLERD 625
+L +E +
Sbjct: 712 ALYDVEEE 719
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 164/341 (48%), Gaps = 37/341 (10%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H L GF D + +++ +Y L ++A KVF + D V WN+L++G +
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSEA 204
Query: 250 IEEAYR-------------LFERMPGKDFVSWTTM-------------------ITG--- 274
+E R L +P V+ TTM +TG
Sbjct: 205 LEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLIS 264
Query: 275 -FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G++E + LF+ M D VT+ A+ISG+ N + F E++ +RP+ T
Sbjct: 265 LYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSST 324
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L +++ + +HAHVVK ++++ + +L +LY + ++ A R F +
Sbjct: 325 LVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMP 384
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
E+ + S+N+MISG+AQNGL E A+ LF++M+ + PN +T S LSAC +G + G
Sbjct: 385 EKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKW 444
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
K + +E ++D+ + GS+AEA + +SM
Sbjct: 445 VHKIIAN-EKLELNVYVMTALIDMYVKCGSIAEARCIFDSM 484
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 156/343 (45%), Gaps = 22/343 (6%)
Query: 7 ASYNAMITALIN--NNCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY-- 61
A + ++T LI+ C E A +F M + V+Y A+I+G+ GM + EL+
Sbjct: 253 AQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKE 312
Query: 62 -VNMPARWRDSVCSNALIS-----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
V M R S ALI G+ + C A + +A ++ + ++ YC+
Sbjct: 313 LVGMGLRPSSSTLV-ALIPVHSPFGHEPLAGCLHA-HVVKAGLDANAPVSTALTTLYCRF 370
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
+ AR FD MPEK + +W AM+ GY + E LF M+ + N +T++
Sbjct: 371 NDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSAL 430
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
AC + G VH +++ + ++ + ++I MY + G + EA +F M ++ V
Sbjct: 431 SACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVV 490
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
SWN +ISGY +G+ EA +L++ M ++ +++ S G +++ +F M
Sbjct: 491 SWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSM 550
Query: 292 PEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+T T ++ Q +EAF E + V P
Sbjct: 551 TSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGP 593
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 118/266 (44%), Gaps = 20/266 (7%)
Query: 14 TALINNNCSIYE---AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA---R 67
TAL C + A F MP + S+ AMI+G+ + G+ A L+ M A R
Sbjct: 361 TALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVR 420
Query: 68 WRDSVCSNALIS----GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
S+AL + G L +G+ I +E +V +++D Y K G + EAR
Sbjct: 421 PNPLTISSALSACAQLGALSLGKWVHKI-IANEKLELNVYVMTALIDMYVKCGSIAEARC 479
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
IFD M KNVV+W M+ GY + L+ M + S T + AC
Sbjct: 480 IFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGL 539
Query: 184 YREGVQV-HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS---WNS 239
+EG V + S +G I ++ + GR G + EA ++ S K AV W +
Sbjct: 540 VKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPK-SAVGPGIWGA 598
Query: 240 LISG-YVH-NGEIEE--AYRLFERMP 261
L+ VH +G++ + + +LFE P
Sbjct: 599 LLGACMVHKDGDLAKLASQKLFELEP 624
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 195/637 (30%), Positives = 326/637 (51%), Gaps = 87/637 (13%)
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDV-------------------VAWG------ 106
+ N ++SGYL G+ + F MVE D+ +A G
Sbjct: 288 ISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCM 347
Query: 107 --------------SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
S+++ YCK ++ AR +F+ M E+++++W +++ G + D +
Sbjct: 348 ALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEA 407
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV----QVHGLVSRFGFDYDIILGNS 208
LF+ + R G+ + T+T + +A EG+ Q+H + D + +
Sbjct: 408 VCLFMQLLRCGLKPDHYTMTSVLKAASSL---PEGLSLSKQIHVHAIKTNNVADSFVSTA 464
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----- 263
+I Y R M EA +F + D V+WN+++SGY + + + LF M +
Sbjct: 465 LIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSD 523
Query: 264 DFVSWTTMIT-GF------------------------SSKGNLEKSIEL---------FN 289
DF T + T GF S G L+ ++ F+
Sbjct: 524 DFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 583
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+P DDV WT +ISG + N + E A F +M V P++ T++++ AS+ L Q
Sbjct: 584 SIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 643
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G QIHA+ +K+N SD + SLV +Y+KCG++ DAY +F I+ NI ++N+M+ G AQ
Sbjct: 644 GRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQ 703
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+G G+EAL LF++M+ G+ P+++TF+ VLSAC+H GLV E + Y +SM Y I+P E
Sbjct: 704 HGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIE 763
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
HY+C+ D LGRAG + EA +LI+SM+ E ++ LL A R + + K A L+EL
Sbjct: 764 HYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLEL 823
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
EP ++ YV+LS++Y+ K + R K +++K PG SWI +K+K+HLF+ +S
Sbjct: 824 EPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRS 883
Query: 590 CLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
+ I ++ + + K+ + P+ D++L+ +E +
Sbjct: 884 NPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEE 920
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 204/400 (51%), Gaps = 15/400 (3%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+A+ + L +G+C A RI + +++ Y K G + AR +FDKMPE+++V
Sbjct: 55 DAISTSDLMLGKCTHA-RILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLV 113
Query: 135 AWTAMVDGYMK-----VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
+W +++ Y + V+ ++ F LF +R+ + + +TL+ + + C
Sbjct: 114 SWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASES 173
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
HG + G D D + +++ +Y + G + E +F M RD V WN ++ Y+ G
Sbjct: 174 FHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGF 233
Query: 250 IEEAYRLFERM------PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV-TWTAI 302
EEA L P + + + I+G S+ KS E N ++ + I
Sbjct: 234 KEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKI 293
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
+SG+++ QY + F++M+ D+ +Q+T VL+ + +L G Q+H +K+ +
Sbjct: 294 LSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGL 353
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
+ +++ NSL+++Y K + A +F N+ ER+++S+NS+I+G AQ+ L EA+ LF +
Sbjct: 354 DLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQ 413
Query: 423 MKDEGLVPNQITFLSVLSACNHV--GLVEEGFIYFKSMKT 460
+ GL P+ T SVL A + + GL I+ ++KT
Sbjct: 414 LLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKT 453
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 149/640 (23%), Positives = 271/640 (42%), Gaps = 111/640 (17%)
Query: 1 MADRTSASYNAMITALINNNC----SIYEAFEIFATMPMRNAVSYAAMIT---------- 46
M +R S+N+++ A ++ ++ EAF +F + R V Y + +T
Sbjct: 107 MPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRIL--RQDVVYTSRMTLSPMLKLCLH 164
Query: 47 -GFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAW 105
G+V + + + D + AL++ YLK G+ +E +FE M +DVV W
Sbjct: 165 SGYVCASESFHGYACKIGLDG---DDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLW 221
Query: 106 GSMVDGYCKKGRVIEAREIF--------------------------------------DK 127
M+ Y + G EA ++ D
Sbjct: 222 NLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDA 281
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
+++ ++ GY+ + F+ M + + +T ++ R G
Sbjct: 282 SAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALG 341
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
QVH + + G D + + NS+I MY +L + A VF+ MS+RD +SWNS+I+G +
Sbjct: 342 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQS 401
Query: 248 GEIEEAYRLFERM----PGKDFVSWTTMITGFSS--KG-NLEKSIELFNM---------- 290
EA LF ++ D + T+++ SS +G +L K I + +
Sbjct: 402 DLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFV 461
Query: 291 -------------MPEK---------DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
M E D V W A++SG+ + + F M ++ R
Sbjct: 462 STALIDAYSRNRCMKEAEVLFGRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGER 521
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ TL++VL +NQG Q+HA+ +K + D+ + + ++ +Y KCG++ A
Sbjct: 522 SDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 581
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F +I + V++ ++ISG +NG E AL++F +M+ G++P++ T ++ A + + +
Sbjct: 582 FDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 641
Query: 449 EEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
E+G I+ ++K N P +VD+ + GS+ +A L + W A+L
Sbjct: 642 EQGRQIHANALK--LNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITA-WNAML 698
Query: 508 ------GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G G+ L L + ++PD T VLS
Sbjct: 699 VGLAQHGEGKEALQL----FKQMESLGIKPDKVTFIGVLS 734
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L + +T+ L G HA ++ + + + N+L+S+YSKCG++ A R+F + ER++
Sbjct: 53 LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112
Query: 398 VSYNSMISGFAQNGLG-----EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
VS+NS+++ +AQ+ G +EA LFR ++ + + +++T +L C H G V
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 168
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 319/619 (51%), Gaps = 53/619 (8%)
Query: 16 LINNNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW-----R 69
++ NC + +A +F MP R+ VS+ +I G + EA Y M R
Sbjct: 202 MLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNL 261
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKD--VVAWGSMVDGYCKKGRVIEAREIFDK 127
SV S IS L+ + V D V ++VD Y K G V ++F++
Sbjct: 262 VSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNE 321
Query: 128 MPEKNVVAWTAMVDGY-MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
EKN V+W ++++G K C+ D + F M G NS+T++ + ++
Sbjct: 322 TVEKNEVSWNSIINGLACKGRCW-DALNAFRMMIDAGAQPNSVTISSILPVLVELECFKA 380
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G ++HG R G + DI + NS+I MY + G EA+ +F + +R+ VSWN++I+ Y
Sbjct: 381 GKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYAL 440
Query: 247 NGEIEEAYRLFERM--------------------------PGKD--------------FV 266
N EA R +M PGK+ FV
Sbjct: 441 NRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFV 500
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
S ++I ++ G L + +FN KD+V++ +I G+ + ++ F EM
Sbjct: 501 S-NSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLG 558
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+P+ ++ V+SA A A L QG ++H ++ ++ S + + NSL+ Y+KCG + A
Sbjct: 559 KKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIAC 618
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
R+F I +++ S+N+MI G+ G E A+++F M+D+ + + +++++VLSAC+H G
Sbjct: 619 RLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGG 678
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
LVE G+ YF M +EP HY CMVD+LGRAG + EA LI + P +WGAL
Sbjct: 679 LVERGWQYFSEMLA-QRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGAL 737
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
LGA R + N++L + AA+HL EL+P Y++LS++Y+ G+ + N++R K + +
Sbjct: 738 LGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAK 797
Query: 567 KSPGCSWIILKDKVHLFLA 585
K+PGCSW+ + D+VH F+A
Sbjct: 798 KNPGCSWVQIYDQVHAFVA 816
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 174/341 (51%), Gaps = 40/341 (11%)
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
DGF+ + M R G+ + T + + C F +G++VHG+V + GFD D+ +GN+++
Sbjct: 142 DGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLL 201
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF------------- 257
+YG GF+++A ++F M +RD VSWN++I NG+ EA +
Sbjct: 202 MLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNL 261
Query: 258 ---------------ERMPGK------------DFVSWTTMITGFSSKGNLEKSIELFNM 290
E M + + ++ + G+++ ++FN
Sbjct: 262 VSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNE 321
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
EK++V+W +II+G + +A F M+ +PN +T+SS+L G
Sbjct: 322 TVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAG 381
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
+IH ++M E+D+ I NSL+ +Y+K G+ +A IF N+D RNIVS+N+MI+ +A N
Sbjct: 382 KEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALN 441
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
L EA+ +M++ G PN +TF +VL AC +G + G
Sbjct: 442 RLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPG 482
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 179/436 (41%), Gaps = 80/436 (18%)
Query: 3 DRTSASYNAMITALINNNCSIYEAFEIFATM----PMRNAVSYAAMITGFVRRGMFYEAE 58
++ S+N++I L ++A F M N+V+ ++++ V F +
Sbjct: 324 EKNEVSWNSIINGLACKG-RCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGK 382
Query: 59 ELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
E++ + M D +N+LI Y K G EA+ IF + +++V+W +M+ Y
Sbjct: 383 EIHGFSMRMGTE-TDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYA-- 439
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
+++P + + + M+ G N++T T +
Sbjct: 440 ---------LNRLPLEAI--------------------RFVIQMQETGECPNAVTFTNVL 470
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
AC R G ++H + R G D+ + NS+I MY + G + A VF+ S++D V
Sbjct: 471 PACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEV 529
Query: 236 SWNSLISGYVHNGEIEEAYRLFE--RMPGK--DFVSWTTMITG----------------- 274
S+N LI GY + ++ LF R+ GK D VS+ +I+
Sbjct: 530 SYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVA 589
Query: 275 ------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
++ G ++ + LFN + KD +W +I G+ + E A
Sbjct: 590 LRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAI 649
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
F M V+ + ++ +VLSA + + +G Q + ++ +E +V L
Sbjct: 650 SMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLL 709
Query: 377 SKCGNVVDAYRIFTNI 392
+ G V +A ++ +
Sbjct: 710 GRAGFVEEAAKLIQQL 725
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 111/274 (40%), Gaps = 53/274 (19%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPM----RNAVSYAAMITGFVRRGMFYEAEE 59
+ SYN +I + ++ +F+ M + + VS+ +I+ + +E
Sbjct: 526 KDEVSYNILIIGYSETD-DCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKE 584
Query: 60 LYVNMPAR---WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
++ + R + SN+L+ Y K GR + A R+F ++ KDV +W +M+ GY G
Sbjct: 585 VH-GVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIG 643
Query: 117 RVIEAREIFDKMPEKNV----VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
+ A +F+ M + V V++ A++ C G + RG F+ +
Sbjct: 644 ELETAISMFEAMRDDTVQYDLVSYIAVLSA-----CSHGGL-----VERGWQYFSEMLAQ 693
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-K 231
L E ++H ++ + GR GF++EA K+ +
Sbjct: 694 RL-----------EPTEMH--------------YTCMVDLLGRAGFVEEAAKLIQQLPIA 728
Query: 232 RDAVSWNSLISGYVHNGEIEEAYR----LFERMP 261
DA W +L+ G +E R LFE P
Sbjct: 729 PDANIWGALLGACRIYGNVELGRRAAEHLFELKP 762
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 263/484 (54%), Gaps = 31/484 (6%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D +++ Y GR+++AR +FDKM ++VV W M+DGY + ++ L+ M+
Sbjct: 150 DPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMK 209
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G ++I L + AC G +H + GF + S++ MY G M
Sbjct: 210 TSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMH 269
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGN 280
A +V+ +++P K V T M++G++ G
Sbjct: 270 LAREVY-------------------------------DQLPSKHMVVSTAMLSGYAKLGM 298
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
++ + +F+ M EKD V W+A+ISG+ + Q EA + F EM R+ + P+Q+T+ SV+SA
Sbjct: 299 VQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISA 358
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A L Q IH + K + I N+L+ +Y+KCGN+V A +F N+ +N++S+
Sbjct: 359 CANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISW 418
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
+SMI+ FA +G + A+ LF +MK++ + PN +TF+ VL AC+H GLVEEG +F SM
Sbjct: 419 SSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMIN 478
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
+ I P EHY CMVD+ RA L +A++LI +M F P +WG+L+ A + H ++L +
Sbjct: 479 EHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGE 538
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
AA L+ELEPD VVLS++Y+ + D VR K K + K CS I + ++V
Sbjct: 539 FAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEV 598
Query: 581 HLFL 584
H+F+
Sbjct: 599 HVFM 602
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 41/310 (13%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------SV 72
I +A +F M R+ V++ MI G+ + + +LY M + S
Sbjct: 167 IMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSA 226
Query: 73 CSNA---------------------------LISGYLKVGRCEEAARIFEAMVEKDVVAW 105
C++A L++ Y G A +++ + K +V
Sbjct: 227 CAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVS 286
Query: 106 GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMA 165
+M+ GY K G V +AR IFD+M EK++V W+AM+ GY + + LF M+R +
Sbjct: 287 TAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIV 346
Query: 166 FNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ IT+ + AC + +H + GF + + N++I MY + G + +A +V
Sbjct: 347 PDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREV 406
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNL 281
F M +++ +SW+S+I+ + +G+ + A LF RM ++ V++ ++ S G +
Sbjct: 407 FENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLV 466
Query: 282 EKSIELFNMM 291
E+ + F+ M
Sbjct: 467 EEGQKFFSSM 476
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
S L+ ++ LF+ +P ++ F E ++ + R ++ +
Sbjct: 61 SPSALDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPP 120
Query: 337 VLSASAATATLNQGSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+L A + + LN G +IH K +D IQ++L+++Y+ CG ++DA +F + R
Sbjct: 121 LLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHR 180
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++V++N MI G++QN + L L+ +MK G P+ I +VLSAC H G + G
Sbjct: 181 DVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYG 236
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 271/489 (55%), Gaps = 43/489 (8%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG---FDLFL 157
D+ ++ Y K G + AR++FD+MP+++ V++ +M+DGY+K E FDL
Sbjct: 127 DLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLVESAGELFDLMP 186
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
+R + +NS+ G + + +GV V
Sbjct: 187 REKRNLITWNSMI--------GGYAQRADGVNV--------------------------- 211
Query: 218 FMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSS 277
A+K+F M ++D +SWNS+I GYV +G IE+A LF+ MP +D V+W MI G+
Sbjct: 212 ----ASKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGK 267
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSS 336
G + ++ LF+ MP +D V + +++SGFV N + EA F M ++ + P++ TL
Sbjct: 268 LGLVHQAKTLFDQMPHRDVVAYNSMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTLVI 327
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
VLSA A L + +H ++V+ + +L+ +YSKCG++ A R+F I+ ++
Sbjct: 328 VLSAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKS 387
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
I +N+MI G A +GLGE A ++ +++ + P+ ITF+ VL+AC+H GLV+EG + F+
Sbjct: 388 IDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFE 447
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
M+ + IEP +HY CMVDIL R+GS+ A +LI M EP +W L A H
Sbjct: 448 LMRRKHKIEPRLQHYGCMVDILARSGSIELAKNLIEEMPIEPNDVIWRTFLNACSHHKEF 507
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+ +L A+HL+ + + YV+LS++Y+ G +D RVR K K+I K PGCSWI L
Sbjct: 508 ETGELVAKHLILQAGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKKIEKLPGCSWIEL 567
Query: 577 KDKVHLFLA 585
+VH FL
Sbjct: 568 DGRVHEFLC 576
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 194/430 (45%), Gaps = 47/430 (10%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N +I + C + A ++F MP R++VSY +MI G+V+ G+ A EL+ MP R
Sbjct: 132 NCLIGLYLKCGCLGF-ARQVFDRMPQRDSVSYNSMIDGYVKCGLVESAGELFDLMPREKR 190
Query: 70 DSVCSNALISGYL-KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
+ + N++I GY + A+++F+ M EKD+++W SM+ GY K GR+ +A+ +FD M
Sbjct: 191 NLITWNSMIGGYAQRADGVNVASKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFDVM 250
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSI------------------ 169
P ++VV W M+DGY K+ LF M R +A+NS+
Sbjct: 251 PRRDVVTWAIMIDGYGKLGLVHQAKTLFDQMPHRDVVAYNSMMSGFVQNRYHIEALEVFN 310
Query: 170 -------------TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
TL I+ A + R + + +H + F LG ++I MY +
Sbjct: 311 HMEKESHLSPDETTLVIVLSAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGVALIDMYSKC 370
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF----ERMPGKDFVSWTTMI 272
G + A +VF + + WN++I G +G E A+ + R D +++ ++
Sbjct: 371 GSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVL 430
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
S G +++ + F +M K + + ++ + E A EM +
Sbjct: 431 NACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIELAKNLIEEM---PI 487
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
PN + + L+A + G + H++ + + S L ++Y+ G D R
Sbjct: 488 EPNDVIWRTFLNACSHHKEFETGELVAKHLI-LQAGYNPSSYVLLSNMYASNGMWKDVRR 546
Query: 388 IFTNIDERNI 397
+ T + E+ I
Sbjct: 547 VRTMMKEKKI 556
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/656 (28%), Positives = 324/656 (49%), Gaps = 91/656 (13%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
++ A +F MP +N S +++ + G A+ L+++ P R++ ++ +
Sbjct: 273 LHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSP--HRNATTWTIMMRAHA 330
Query: 83 KVGRCEEAARIFEAMVEKDVVA----------------------------------WGSM 108
GR +A +F AM+ + V+ ++
Sbjct: 331 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTL 390
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
+D YCK G + AR +F +M +K+ V + AM+ G K LF +MRR G + +
Sbjct: 391 LDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHP 450
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
+ L +Q SR ++ + NS++ Y + +D+ ++F
Sbjct: 451 LHL----------------LQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDE 494
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMIT----------- 273
M +RD VS+N +I+ Y N RLF M F + + TM++
Sbjct: 495 MPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIG 554
Query: 274 ----------GFSSK--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
G +S+ G L+ + F+ EK ++WTA+I+G+V N
Sbjct: 555 KQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQN 614
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
Q+EEA + F +M R +RP++ T SS++ AS++ A + G Q+H+++++ +S V
Sbjct: 615 GQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG 674
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
+ LV +Y+KCG + +A R F + ERN +S+N++IS +A G + A+ +F M G
Sbjct: 675 SVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFN 734
Query: 430 PNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
P+ +TFLSVL+AC+H GL +E YF MK Y+I P EHYAC++D LGR G ++
Sbjct: 735 PDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQK 794
Query: 490 LINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGK 549
++ M F+ P +W ++L + R H N +LA++AA L +EP ATPYV+LS++Y+ G+
Sbjct: 795 MLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQ 854
Query: 550 KRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
D V+ + + +RK G SW+ +K K++ F + + + EI+ L + K
Sbjct: 855 WEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYK 910
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 207/440 (47%), Gaps = 37/440 (8%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L G A +F+ M K++ + ++ Y G + A+ +F P +N WT M+
Sbjct: 268 LSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMR 327
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
+ D LF +M G+ + +T+T + G +H +FG D
Sbjct: 328 AHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDT 382
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
+ + N+++ Y + G + A +VF M +DAV++N+++ G G +A +LF M
Sbjct: 383 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 442
Query: 262 GKDFVSWTTMITGFSSKGNLEKSI-----------------------ELFNMMPEKDDVT 298
+ + +S + S+ LF+ MPE+D+V+
Sbjct: 443 RAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVS 502
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
+ II+ + N+ R F EM + L +++LS + + ++ G QIHA +V
Sbjct: 503 YNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV 562
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ + S+ + N+L+ +YSKCG + A F+N E++ +S+ ++I+G+ QNG EEAL
Sbjct: 563 LLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQ 622
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY----ACM 474
LF M+ GL P++ TF S++ A + + ++ G + + + Y I G + + +
Sbjct: 623 LFSDMRRAGLRPDRATFSSIIKASSSLAMIGLG----RQLHS-YLIRSGYKSSVFSGSVL 677
Query: 475 VDILGRAGSLAEAIDLINSM 494
VD+ + G L EA+ + M
Sbjct: 678 VDMYAKCGCLDEALRTFDEM 697
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 196/469 (41%), Gaps = 81/469 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPM----RNAVSYAAMIT-----GFVRR 51
M +R + SYN +I A N C+ +F M R + YA M++ V
Sbjct: 495 MPERDNVSYNVIIAAYAWNQCAA-TVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHI 553
Query: 52 GMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDG 111
G A+ + + + + + + NALI Y K G + A F EK ++W +++ G
Sbjct: 554 GKQIHAQLVLLGLAS---EDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 610
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y + G+ E+ LF MRR G+ + T
Sbjct: 611 YVQNGQ-------------------------------HEEALQLFSDMRRAGLRPDRATF 639
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ + +A G Q+H + R G+ + G+ ++ MY + G +DEA + F M +
Sbjct: 640 SSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPE 699
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIEL 287
R+++SWN++IS Y H GE + A ++FE M D V++ +++ S G ++ ++
Sbjct: 700 RNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKY 759
Query: 288 FNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
F++M + ++ + +I + + + +EM + + + +S+L +
Sbjct: 760 FHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEM---PFKADPIIWTSILHSCR 816
Query: 343 ATATLNQGSQIHAHVVK---MNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI- 397
G+Q A V ME +D + L ++Y++ G DA + + +R +
Sbjct: 817 I-----HGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVR 871
Query: 398 -------VSYNSMISGFAQNGLGEEALN--------LFRKMKDEGLVPN 431
V I FA N L ++ L+++M +G P+
Sbjct: 872 KESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 920
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 111/211 (52%), Gaps = 9/211 (4%)
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSI 285
F +++ R + SL+S +G + A +F++MP K+ S +++ +SS G+L +
Sbjct: 253 FDVLTYRLNLGLRSLLS----SGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQ 308
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
LF P ++ TWT ++ + +A F ML + V P+++T+++VL+ T
Sbjct: 309 HLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV 368
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+H +K +++ V + N+L+ Y K G + A R+F + +++ V+YN+M+
Sbjct: 369 P-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMM 423
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
G ++ GL +AL LF M+ G + + L
Sbjct: 424 GCSKEGLHTQALQLFAAMRRAGYSRHPLHLL 454
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 282/561 (50%), Gaps = 73/561 (13%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + A +F + N V W M+ G + + ++ M G N T +F
Sbjct: 76 GDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIF 135
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG--------RL----------- 216
++C + EG QVH V + G +++ + S+I MY RL
Sbjct: 136 KSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAV 195
Query: 217 ------------GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--- 261
GF+DEA ++F + RD VSWN++ISGY +G +EEA FE M
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAK 255
Query: 262 ------------------------GKDFVSWTT-------------MITGFSSKGNLEKS 284
G SW +I + G+LE++
Sbjct: 256 VTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEA 315
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
LF + +K+ V+W +I G+ + Y+EA F M++ ++ PN +T S+L A A
Sbjct: 316 SNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANL 375
Query: 345 ATLNQGSQIHAHVVK--MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
L+ G +HA+V K +M++ V++ SL+ +Y+KCG++ A RIF ++ +++ ++N+
Sbjct: 376 GALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNA 435
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
MISGFA +G + AL LF +M EG VP+ ITF+ VL+AC H GL+ G YF SM Y
Sbjct: 436 MISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDY 495
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
+ P HY CM+D+ GRAG EA L+ +M +P +W +LLGA R H ++LA+
Sbjct: 496 KVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESV 555
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
A+HL ELEP++ + YV+LS++Y+ G+ D ++R + R++K PGCS I + VH
Sbjct: 556 AKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHE 615
Query: 583 FLAGRKSCLDLKEIEVTLQTI 603
FL G K EI L I
Sbjct: 616 FLVGDKVHPQSNEIYKMLDEI 636
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 212/496 (42%), Gaps = 81/496 (16%)
Query: 9 YNAMI-TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+NA + T+LIN N + A +F MR+AVS+ A+ITG+ +G EA EL+ +
Sbjct: 161 HNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEI 220
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV--------------------- 103
P RD V NA+ISGY + GR EEA FE M V
Sbjct: 221 PV--RDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQ 278
Query: 104 ------AW-------------GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
+W ++D Y K G + EA +F+K+ +KNVV+W M+ GY
Sbjct: 279 LGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYT 338
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF--GFDYD 202
+ C+++ LF M + + N +T + AC G VH V +
Sbjct: 339 HMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNT 398
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+ L S+I MY + G + A ++F M+ + +WN++ISG+ +G + A LF RM
Sbjct: 399 VALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTS 458
Query: 263 KDFV----SWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYE 313
+ FV ++ ++T G L F+ M + V+ + +I F ++
Sbjct: 459 EGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFD 518
Query: 314 EAFRWFIEMLRK--DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
EA E L K +++P+ S+L A + + H+ ++ E + S
Sbjct: 519 EA-----ETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPE-NPSAYVL 572
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNI--------VSYNSMISGFAQNGLGEEALNLFRKM 423
L ++Y+ G D +I T +++ + + +S++ F N KM
Sbjct: 573 LSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKM 632
Query: 424 KDE--------GLVPN 431
DE G VP+
Sbjct: 633 LDEIDMRLEKAGFVPD 648
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 194/450 (43%), Gaps = 79/450 (17%)
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+LI+ Y + G A +F+ +D V++ +++ GY KG + EARE+FD++P ++VV+
Sbjct: 168 SLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVS 227
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE-GVQVHGLV 194
W AM+ GY + E+ F MRR + N T+ + AC + + G V +
Sbjct: 228 WNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWI 287
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
G +I L N +I MY + G ++EA+ +F + ++ VSWN +I GY H +EA
Sbjct: 288 EDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEAL 347
Query: 255 RLFERMPGKD-------FVS----------------------------------WTTMIT 273
LF RM + F+S WT++I
Sbjct: 348 GLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLID 407
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G+L + +F+ M K TW A+ISGF + + A F M + P+ +T
Sbjct: 408 MYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDIT 467
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
VL+A L+ G + + +++ Y++ +
Sbjct: 468 FVGVLTACKHAGLLSLGRRYFS-------------------------SMIQDYKVSPKLP 502
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
Y MI F + GL +EA L + M+ + P+ + S+L AC +E +
Sbjct: 503 H-----YGCMIDLFGRAGLFDEAETLVKNME---MKPDGAIWCSLLGACRIHRRIE---L 551
Query: 454 YFKSMKTLYNIEP-GPEHYACMVDILGRAG 482
K L+ +EP P Y + +I AG
Sbjct: 552 AESVAKHLFELEPENPSAYVLLSNIYAGAG 581
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 33/271 (12%)
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
S G+L ++ LF + + V W +I G ++E A +++ M+ PN+ T
Sbjct: 73 SPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFP 132
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN---- 391
S+ + ++G Q+HAHV+K+ +E + + SL+++Y++ G +V+A +F
Sbjct: 133 SIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMR 192
Query: 392 -----------------IDE----------RNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
+DE R++VS+N+MISG+AQ+G EEA+ F +M+
Sbjct: 193 DAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMR 252
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
+ PN T LSVLSAC G + + +S + ++D+ + G L
Sbjct: 253 RAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDL 312
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
EA +L + + W ++G G TH++
Sbjct: 313 EEASNLFEKIQ-DKNVVSWNVMIG-GYTHMS 341
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 269/481 (55%), Gaps = 45/481 (9%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C R E HG + R + D+ L N +I Y + GF++ A +VF M +R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDF---------------------------- 265
VSWN++I Y N EA +F M + F
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 266 -----------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
T ++ ++ G ++ ++++F M +K VTW+++++G+V N+ YEE
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A + R + NQ TLSSV+ A + A L +G Q+HA + K S+V + +S V
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+KCG++ ++Y IF+ + E+N+ +N++ISGFA++ +E + LF KM+ +G+ PN++T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F S+LS C H GLVEEG +FK M+T Y + P HY+CMVDILGRAG L+EA +LI S+
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
F+P +WG+LL + R + NL+LA++AA+ L ELEP++A +V+LS++Y+ +
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA---NKQWE 483
Query: 555 RVRMKKKLKR---IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD 611
+ +KL R ++K G SWI +KDKVH F G ++EI TL + ++F
Sbjct: 484 EIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 543
Query: 612 W 612
+
Sbjct: 544 Y 544
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 179/386 (46%), Gaps = 51/386 (13%)
Query: 55 YEAEELYVNMPARWRDSVCSNALISGYLKV----GRCEEA----ARIFEAMVEKDVVAWG 106
Y+ EE+ P R+ + + L+ L++ G EA +I +E DV
Sbjct: 44 YDQEEVS---PGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLN 100
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ Y K G V AR++FD M E+++V+W M+ Y + + D+FL MR G F
Sbjct: 101 VLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKF 160
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T++ + ACG E ++H L + D ++ +G +++ +Y + G + +A +VF
Sbjct: 161 SEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVF 220
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEA---YRLFERMP---------------------- 261
M + +V+W+S+++GYV N EEA YR +RM
Sbjct: 221 ESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALI 280
Query: 262 --------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
G + ++ + ++ G+L +S +F+ + EK+ W IISGF
Sbjct: 281 EGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFA 340
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV-VKMNMESDV 366
+ + +E F +M + + PN++T SS+LS T + +G + + + +V
Sbjct: 341 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 400
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNI 392
+ +V + + G + +AY + +I
Sbjct: 401 VHYSCMVDILGRAGLLSEAYELIKSI 426
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 149/296 (50%), Gaps = 17/296 (5%)
Query: 11 AMITALIN--NNCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
++ LIN + C E A ++F M R+ VS+ MI + R M EA ++++ M R
Sbjct: 97 TLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEM--R 154
Query: 68 WRDSVCSNALISGYLKVG--RCE--EAARI----FEAMVEKDVVAWGSMVDGYCKKGRVI 119
S IS L C+ E ++ + ++ ++ +++D Y K G +
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+A ++F+ M +K+ V W++MV GY++ +E+ L+ +R + N TL+ + AC
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
EG Q+H ++ + GF ++ + +S + MY + G + E+ +FS + +++ WN+
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
+ISG+ + +E LFE+M V+++++++ G +E+ F +M
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 122/230 (53%), Gaps = 13/230 (5%)
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N+ + +L A + + H ++++++E DV++ N L++ YSKCG V A ++F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-HVGLV 448
+ ER++VS+N+MI + +N + EAL++F +M++EG ++ T SVLSAC + +
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 449 EEGFIYFKSMKTL--YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
E ++ S+KT N+ G ++D+ + G + +A+ + SM + W ++
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVG----TALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSM 234
Query: 507 LGAGRTHLNLDLAKLAAQ--HLMELEPDSATPYVVL---SDLYSVIGKKR 551
+ + N + A L + M LE + T V+ S+L ++I K+
Sbjct: 235 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ 284
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 277/487 (56%), Gaps = 39/487 (8%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D+ ++ Y K G + AR+IFD+MP+++ V++ +M+DGY+K E +LF M
Sbjct: 159 DLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMP 218
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG-FM 219
R +V L+S NSII+ Y + +
Sbjct: 219 R---------------------------EVKNLIS----------WNSIISGYAQTSDGV 241
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG 279
D A+ +F+ M ++D +SWNS+I GYV +G IE+A LF+ MP +D V+W TMI G++ G
Sbjct: 242 DIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLG 301
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVL 338
+ ++ LF+ MP +D V++ ++++G+V N+ + EA F +M ++ + P++ TL VL
Sbjct: 302 FVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVL 361
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA A L++ +H ++V+ + +L+ +YSKCG++ A +F I+ ++I
Sbjct: 362 SAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID 421
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
+N+MI G A +GLGE A ++ +++ + P+ ITF+ VL+AC+H GLV+EG + F+ M
Sbjct: 422 HWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELM 481
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+ + IEP +HY CMVDIL R+GS+ A +LI M EP +W L A H +
Sbjct: 482 RRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIQEMPIEPNDVIWRTFLTACNHHKEFET 541
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+L +HL+ + + YV+LS++Y+ GK +D R+R K ++I K PGCSWI L
Sbjct: 542 GELVGKHLILQAGYNPSSYVLLSNMYASFGKWKDVRRIRTMMKERKIEKIPGCSWIELDG 601
Query: 579 KVHLFLA 585
+VH F
Sbjct: 602 RVHEFFV 608
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 195/433 (45%), Gaps = 53/433 (12%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N +I + C + A +IF MP R++VS+ +MI G+V+RG+ A EL+ MP +
Sbjct: 164 NCLIGLYLKCGCLGF-ARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMPREVK 222
Query: 70 DSVCSNALISGYLKVGR-CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
+ + N++ISGY + + A+ +F M EKD+++W SM+DGY K GR+ +A+++FD M
Sbjct: 223 NLISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAM 282
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSI------------------ 169
P ++VV W M+DGY K+ LF M R +++NS+
Sbjct: 283 PRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFS 342
Query: 170 -------------TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
TL I+ A + R + + +H + F LG ++I MY +
Sbjct: 343 DMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKC 402
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF----ERMPGKDFVSWTTMI 272
G + A VF + + WN++I G +G E A+ + R D +++ ++
Sbjct: 403 GSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVL 462
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
S G +++ + F +M K + + ++ + E A EM +
Sbjct: 463 NACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIQEM---PI 519
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKM---NMESDVSIQNSLVSLYSKCGNVVD 384
PN + + L+A G + H++ N S V + N +Y+ G D
Sbjct: 520 EPNDVIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYVLLSN----MYASFGKWKD 575
Query: 385 AYRIFTNIDERNI 397
RI T + ER I
Sbjct: 576 VRRIRTMMKERKI 588
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 31/277 (11%)
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+D W A+I + + ++A F ML V ++ ++S VL A + + G QI
Sbjct: 88 EDPFLWNAVIKSHSHGKDPKQALLLFCLMLENGVSVDKFSMSLVLKACSRLGFVKGGLQI 147
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H + K + SD+ +QN L+ LY KCG + A +IF + +R+ VS+NSMI G+ + GL
Sbjct: 148 HGILRKTGLCSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLI 207
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVG------------LVEEGFIYFKSM--- 458
E A LF M E V N I++ S++S + E+ I + SM
Sbjct: 208 ESARELFDLMPRE--VKNLISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISWNSMIDG 265
Query: 459 ----------KTLYNIEPGPE--HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
K L++ P + +A M+D + G + +A L + M +
Sbjct: 266 YVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMM 325
Query: 507 LGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
G + +++ ++ + E L PD T +VLS
Sbjct: 326 AGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLS 362
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 269/512 (52%), Gaps = 40/512 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D V ++D Y K G + + ++F+ + +NVV WT+M+ GY+K D +E+G LF MR
Sbjct: 187 DNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMR 246
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
+ N T L AC + +G HG + + G + L S++ MY + G +
Sbjct: 247 ENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDIS 306
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFS 276
A +VF+ S D V W ++I GY HNG + EA LF++M G + V+ ++++G
Sbjct: 307 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCG 366
Query: 277 SKGNLE--KSIE--------------------------------LFNMMPEKDDVTWTAI 302
GNLE +SI +F M EKD V W +I
Sbjct: 367 LVGNLELGRSIHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSI 426
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
ISGF N EA F M + V PN +T++S+ SA A+ +L GS +HA+ VK+
Sbjct: 427 ISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGF 486
Query: 363 --ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
S V + +L+ Y+KCG+ A IF I+E+N +++++MI G+ + G + +L LF
Sbjct: 487 LASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELF 546
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M + PN+ TF SVLSAC+H G+V EG YF SM YN P +HY CMVD+L R
Sbjct: 547 EEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLAR 606
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L +A+D+I M +P +GA L H DL ++ + +++L PD A+ YV++
Sbjct: 607 AGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLV 666
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
S+LY+ G+ VR K + + K G S
Sbjct: 667 SNLYASDGRWSQAKEVRNLMKQRGLSKIAGHS 698
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 228/489 (46%), Gaps = 57/489 (11%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY-MKVDCFE--DGFDLFL 157
D+ +V Y G +AR +FD++PE + W ++ Y + + FE +DL +
Sbjct: 87 DISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLM 146
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF-GFDYDIILGNSIITMYGRL 216
+ G ++ I + +AC G ++H + + FD ++ G ++ MY +
Sbjct: 147 ---KHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLTG--LLDMYAKC 201
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-----GKDFV----- 266
G + + KVF ++ R+ V W S+I+GYV N EE LF RM G ++
Sbjct: 202 GEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLV 261
Query: 267 ------------SW-----------------TTMITGFSSKGNLEKSIELFNMMPEKDDV 297
W T+++ + G++ + +FN D V
Sbjct: 262 MACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLV 321
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
WTA+I G+ +N EA F +M ++PN +T++SVLS L G IH
Sbjct: 322 MWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLS 381
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
+K+ + D ++ N+LV +Y+KC DA +F E++IV++NS+ISGF+QNG EAL
Sbjct: 382 IKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEAL 440
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVD 476
LF +M E ++PN +T S+ SAC +G + G ++ S+K + ++D
Sbjct: 441 FLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLD 500
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA----GRTHLNLDLAKLAAQHLMELEPD 532
+ G AE+ LI E W A++G G T +L+L + + + +P+
Sbjct: 501 FYAKCGD-AESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKK--QQKPN 557
Query: 533 SATPYVVLS 541
+T VLS
Sbjct: 558 ESTFTSVLS 566
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 231/538 (42%), Gaps = 92/538 (17%)
Query: 10 NAMITALIN--NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA 66
N ++T L++ C I ++++F + +RN V + +MI G+V+ ++ E L+ M
Sbjct: 188 NVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMR- 246
Query: 67 RWRDSVCSNALISGYLKVG----RCEEAARIFEAMVEKDVVAWG-----SMVDGYCKKGR 117
+SV N G L + R + F + K + S++D Y K G
Sbjct: 247 --ENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGD 304
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ AR +F++ ++V WTAM+ GY + LF M G+ N +T+ +
Sbjct: 305 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSG 364
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
CG G +HGL + G +D + N+++ MY + +A VF M S++D V+W
Sbjct: 365 CGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAW 423
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKD--------------------------------- 264
NS+ISG+ NG I EA LF RM +
Sbjct: 424 NSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVK 483
Query: 265 --FVSWTTMITG------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
F++ +++ G ++ G+ E + +F+ + EK+ +TW+A+I G+ + +
Sbjct: 484 LGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSL 543
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
F EML+K +PN+ T +SVLSA + T +N+G + + +M D + S
Sbjct: 544 ELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFS-----SMYKDYNFTPS----- 593
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
Y M+ A+ G E+AL++ KM + P+ F
Sbjct: 594 --------------------TKHYTCMVDMLARAGELEQALDIIEKMP---IQPDVRCFG 630
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+ L C + G I K M L+ +Y + ++ G ++A ++ N M
Sbjct: 631 AFLHGCGMHSRFDLGEIVIKKMLDLH--PDDASYYVLVSNLYASDGRWSQAKEVRNLM 686
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 38/301 (12%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q HG+++ G DI + ++++YG G+ +A VF + + D W ++ Y N
Sbjct: 74 QAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNN 133
Query: 249 EIEEAYRLFE--------------------------------------RMPGKDFVSWTT 270
E E + ++ ++P D V T
Sbjct: 134 ESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLTG 193
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
++ ++ G ++ S ++F + ++ V WT++I+G+V N+ YEE F M V N
Sbjct: 194 LLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGN 253
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ T +++ A L+QG H ++K +E + SL+ +Y KCG++ +A R+F
Sbjct: 254 EYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 313
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
++V + +MI G+ NG EAL+LF+KM G+ PN +T SVLS C VG +E
Sbjct: 314 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLEL 373
Query: 451 G 451
G
Sbjct: 374 G 374
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 237/392 (60%), Gaps = 39/392 (9%)
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPGKD--------------FVSWTTMI------ 272
D VSWNSLI G V G E+A F++M +D F S M
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64
Query: 273 -----TGF--------------SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
TGF + +G L+ +I +F+ M +KD V+WT++++G+ +N YE
Sbjct: 65 CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EA + F +M V P+Q+ ++SVLSA A ++ G QIHA +VK +ES +S+ NSLV
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLV 184
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
++Y+KCG++VDA R F N+ R+++S+ ++I G+AQNG G+ +L + +M G P+ I
Sbjct: 185 TMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYI 244
Query: 434 TFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
TF+ +L AC+H GL+ G YF++M +Y I+PGPEHYACM+D+LGR+G LAEA L+N
Sbjct: 245 TFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQ 304
Query: 494 MTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDG 553
M P VW ALL A R H L+L ++AA++L ELEP ++ PYV+LS++YS GK D
Sbjct: 305 MVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDA 364
Query: 554 NRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
R+R + + I K PG SWI KV F++
Sbjct: 365 ARIRRLMRSRGICKEPGYSWIETNSKVSTFMS 396
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 193/433 (44%), Gaps = 41/433 (9%)
Query: 33 MPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR--DSVCSNALISGYLKVGRCEEA 90
M + VS+ ++I G VR G +A + M +R D ++++ + + + A
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 91 ARIFEAMVEKDVVAW----GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV 146
+ +++ A+ +++D Y K+G++ A +F KM +K+VV+WT++V GY
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 147 DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
+E+ LF MR G+ + I + + AC G Q+H + + G + + +
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK--- 263
NS++TMY + G + +AN+ F M RD +SW +LI GY NG + + + +++M
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240
Query: 264 -DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFR 317
D++++ ++ S G L F M + + + +I + + EA
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK---MNMESDVSIQNSLVS 374
+M+ V P+ + ++L+A L G ++ + MN V + N
Sbjct: 301 LLNQMV---VAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSN---- 353
Query: 375 LYSKCGNVVDAYRIFTNIDERNI--------VSYNSMISGFA--------QNGLGEEALN 418
+YS G DA RI + R I + NS +S F +N + +
Sbjct: 354 MYSAAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDE 413
Query: 419 LFRKMKDEGLVPN 431
+ +K+ G VP+
Sbjct: 414 IIMLIKEAGYVPD 426
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 275/478 (57%), Gaps = 10/478 (2%)
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+M E NV + A+ G++ +L++ M R ++ +S T + L +A R+ E
Sbjct: 85 QMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGE 144
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
+Q H + +FGF + + + ++I Y G + EA KVF M +RD ++W +++S Y
Sbjct: 145 SLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 202
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+++ A L +M K+ + +I G+ GNLE++ LFN MP KD ++WT +I G+
Sbjct: 203 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 262
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N++Y EA F +M+ + + P+++T+S+V+SA A L G ++H + ++ DV
Sbjct: 263 SQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDV 322
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
I ++LV +YSKCG++ A +F N+ ++N+ +NS+I G A +G +EAL +F KM+ E
Sbjct: 323 YIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEME 382
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+ PN +TF+SV +AC H GLV+EG ++SM Y+I EHY MV + +AG + E
Sbjct: 383 SVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYE 442
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A++LI +M FEP +WGALL R H NL +A++A LM LEP ++ Y +L +Y+
Sbjct: 443 ALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAE 502
Query: 547 IGKKRDGNRVRMKKKLKRIRK-SPGCSWIILKDKVHLFLAGRKS-------CLDLKEI 596
+ RD +R + + I K PG S I + + HLF A KS CL L EI
Sbjct: 503 QNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 560
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 129/252 (51%), Gaps = 6/252 (2%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV 103
+I + G EA +++ MP R D + ++S Y +V + A + M EK+
Sbjct: 165 LIDFYSATGRIREARKVFDEMPER--DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEA 222
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
+++GY G + +A +F++MP K++++WT M+ GY + + + +F M G
Sbjct: 223 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 282
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+ + +T++ + AC G +VH + GF D+ +G++++ MY + G ++ A
Sbjct: 283 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 342
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKG 279
VF + K++ WNS+I G +G +EA ++F +M + + V++ ++ T + G
Sbjct: 343 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 402
Query: 280 NLEKSIELFNMM 291
+++ ++ M
Sbjct: 403 LVDEGRRIYRSM 414
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 201/478 (42%), Gaps = 94/478 (19%)
Query: 11 AMITALINNNCSIYEAFEIFAT--------------MPMRNAVSYAAMITGFVRRGMFYE 56
AMI +N +C + F T M N Y A+ GFV
Sbjct: 50 AMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIR 109
Query: 57 AEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG---------S 107
+ ELYV M RDSV ++ Y + + A F ++ + +G +
Sbjct: 110 SLELYVRM---LRDSVSPSSYT--YSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTT 164
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++D Y GR+ EAR++FD+MPE++ +AWT MV Y +V L M N
Sbjct: 165 LIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRV----------LDMDSANSLAN 214
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
++ + + N +I Y LG +++A +F+
Sbjct: 215 QMS-----------------------------EKNEATSNCLINGYMGLGNLEQAESLFN 245
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLE- 282
M +D +SW ++I GY N EA +F +M + D V+ +T+I+ + G LE
Sbjct: 246 QMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEI 305
Query: 283 -KSIELFNMMPE--KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
K + ++ + D +A++ + E A F + +K N +S++
Sbjct: 306 GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWNSIIE 361
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC---GNVVDAYRIFTN-IDER 395
AA + ++ A KM MES + VS+++ C G V + RI+ + ID+
Sbjct: 362 GLAAHGFAQEALKMFA---KMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY 418
Query: 396 NIVS----YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-HVGLV 448
+IVS Y M+ F++ GL EAL L M+ E PN + + ++L C H LV
Sbjct: 419 SIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE---PNAVIWGALLDGCRIHKNLV 473
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 139/336 (41%), Gaps = 81/336 (24%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
IT +S L+ ++ M E + + A+ GFV + ++ MLR V P+
Sbjct: 67 ITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSS 126
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T SS++ AS+ + G + AH+ K V IQ +L+ YS G + +A ++F
Sbjct: 127 YTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDE 184
Query: 392 IDERNIVSYNSMISGFAQ-----------------------------NGLG--EEALNLF 420
+ ER+ +++ +M+S + + GLG E+A +LF
Sbjct: 185 MPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLF 244
Query: 421 R-------------------------------KMKDEGLVPNQITFLSVLSACNHVGLVE 449
KM +EG++P+++T +V+SAC H+G++E
Sbjct: 245 NQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE 304
Query: 450 EG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG---VW 503
G +Y + ++ G + +VD+ + GSL A+ + F P W
Sbjct: 305 IGKEVHMYTLQNGFVLDVYIG----SALVDMYSKCGSLERALLVF----FNLPKKNLFCW 356
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
+++ H A+ A + ++E +S P V
Sbjct: 357 NSIIEGLAAH---GFAQEALKMFAKMEMESVKPNAV 389
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 22/183 (12%)
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
A ++K ++ D + N ++ + + A T + E N+ YN++ GF
Sbjct: 49 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 108
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE---------GFIYFKSMKTLYNIE 465
+L L+ +M + + P+ T+ S++ A + E GF + ++T
Sbjct: 109 RSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQT----- 163
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
++D G + EA + + M E W ++ A R L++D A A
Sbjct: 164 -------TLIDFYSATGRIREARKVFDEMP-ERDDIAWTTMVSAYRRVLDMDSANSLANQ 215
Query: 526 LME 528
+ E
Sbjct: 216 MSE 218
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 25 EAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN----- 75
EA ++FA M M NAV++ ++ T G+ E +Y +M + S+ SN
Sbjct: 371 EALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY--SIVSNVEHYG 428
Query: 76 ALISGYLKVGRCEEAARIFEAM-VEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
++ + K G EA + M E + V WG+++DG ++ A F+K+
Sbjct: 429 GMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 482
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 193/654 (29%), Positives = 320/654 (48%), Gaps = 67/654 (10%)
Query: 30 FATMPMRNAVSYAAMITGFVRRGMFYEAEEL----------------YVNMPARWRDSVC 73
F + +N S+ ++I+ +VR G ++EA + P + V
Sbjct: 77 FDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV- 135
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+L+ G KV C +F+ E DV S+V Y + G + A ++F MP K+V
Sbjct: 136 --SLVDGK-KVHCC-----VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDV 187
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+W AM+ G+ + + M+ G+ ++IT+ + C + GV +H
Sbjct: 188 GSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLH 247
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V + G D D+ + N++I MY + G + +A VF M RD VSWNS+I+ Y N + A
Sbjct: 248 VLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTA 307
Query: 254 YRLFERMP----------------------------------------GKDFVSWTTMIT 273
R F+ M KD V ++
Sbjct: 308 LRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVN 367
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQL 332
++ G + + +F+ +P KD ++W +++G+ N EA + M +D PNQ
Sbjct: 368 MYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG 427
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S++ A + L QG +IHA ++K ++ DV + L+ LY KCG + DA +F I
Sbjct: 428 TWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEI 487
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
V +N++I+ +G GEEAL LF+ M E + + ITF+S+LSAC+H GLV+EG
Sbjct: 488 PRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQ 547
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
F M+ Y I+P +HY CMVD+LGRAG L +A +L+ +M +P +WGALL A +
Sbjct: 548 KCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKI 607
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
+ N +L LA+ L+E++ ++ YV+LS++Y+ K +VR + + +RK+PG S
Sbjct: 608 YGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWS 667
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
+++ K +F G ++ EI L+ +S K + P + + +E D
Sbjct: 668 SVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEED 721
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 227/463 (49%), Gaps = 58/463 (12%)
Query: 100 KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL---F 156
+++V +++ Y G + +R FD + +KN+ +W +++ Y++ + + +
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 157 LSMRRGG-MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
SM GG + + T + +AC +G +VH V + GF+ D+ + S++ +Y R
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK------------ 263
G +D A+KVF M +D SWN++ISG+ NG A + RM G+
Sbjct: 169 YGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASI 228
Query: 264 ---------------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
D +I +S G L+ + +F+ M +D
Sbjct: 229 LPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDL 288
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+W +II+ + N A R+F M +RP+ LT+ S+ S + + I
Sbjct: 289 VSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGF 348
Query: 357 VVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
V++ ++ DV I N+LV++Y+K G + A+ +F + ++ +S+N++++G+ QNGL E
Sbjct: 349 VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASE 408
Query: 416 ALNLFRKMKD-EGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYAC 473
A++ + M++ +PNQ T++S++ A +HVG +++G I+ K +K ++ C
Sbjct: 409 AIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA--TC 466
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGV---WGALLGAGRTH 513
++D+ G+ G L +A+ S+ +E P W A++ + H
Sbjct: 467 LIDLYGKCGRLEDAM----SLFYEIPRDTSVPWNAIIASLGIH 505
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 211/481 (43%), Gaps = 96/481 (19%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------SVC-- 73
A ++F MP+++ S+ AMI+GF + G A + M VC
Sbjct: 175 AHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQ 234
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
S+ +I+G L + + ++ DV ++++ Y K GR+ +A+ +FD+M +++
Sbjct: 235 SDDVINGVLI------HLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDL 288
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W +++ Y + + F M+ GG+ + +T+ L + R + G
Sbjct: 289 VSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGF 348
Query: 194 VSRFG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG---E 249
V R D D+++GN+++ MY +LG+M+ A+ VF + ++D +SWN+L++GY NG E
Sbjct: 349 VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASE 408
Query: 250 IEEAYRLFER----MPGKDFVSWTTMITGFSSK--------------------------- 278
+AY + E +P + +W ++I +S
Sbjct: 409 AIDAYNMMEECRDTIPNQG--TWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATC 466
Query: 279 --------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
G LE ++ LF +P V W AII+ + + EEA + F +ML + V+ +
Sbjct: 467 LIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKAD 526
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+T S+LSA + + +++G + M+ + I+ SL
Sbjct: 527 HITFVSLLSACSHSGLVDEGQKCFD-----IMQKEYGIKPSL------------------ 563
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
Y M+ + G E+A L R M + P+ + ++LSAC G E
Sbjct: 564 -------KHYGCMVDLLGRAGYLEKAYELVRNMP---IQPDASIWGALLSACKIYGNAEL 613
Query: 451 G 451
G
Sbjct: 614 G 614
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 144/292 (49%), Gaps = 40/292 (13%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++H L+ FG +I+L +I +Y G + + F + K++ SWNS+IS YV G
Sbjct: 40 KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99
Query: 249 EIEEAY----RLFERMPG----KDFVSWTTMITG-------------------------- 274
+ EA +LF G DF ++ ++
Sbjct: 100 KYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVA 159
Query: 275 ------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+S G L+ + ++F MP KD +W A+ISGF N A M + V+
Sbjct: 160 ASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVK 219
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ +T++S+L A + + G IH HV+K ++SDV + N+L+++YSK G + DA +
Sbjct: 220 MDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMV 279
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
F ++ R++VS+NS+I+ + QN AL F+ M+ G+ P+ +T +S+ S
Sbjct: 280 FDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTS 331
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ +N ++HA ++ ++ + L++LY G++ + F I ++NI S+NS
Sbjct: 31 SCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNS 90
Query: 403 MISGFAQNGLGEEALN----LFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+IS + + G EA+N LF L P+ TF +L AC V LV+
Sbjct: 91 IISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLVD 139
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 315/636 (49%), Gaps = 53/636 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
++ EA +IF ++ + V++ A+I G+ + G EA L+ M D ++I+
Sbjct: 107 NVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMV----DEGLEPSIITFL 162
Query: 82 LKVGRC----------EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
+ C E A++ A D ++V Y K G + +AR++FD + +
Sbjct: 163 SVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIR 222
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+V + MV GY K +E F+LF M++ G+ N I+ + + C G VH
Sbjct: 223 DVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVH 282
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
G DI + S+I MY G ++ A +VF M RD VSW +I GY NG IE
Sbjct: 283 AQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIE 342
Query: 252 EAYRLFERMP---------------------------------------GKDFVSWTTMI 272
+A+ LF M G D + T ++
Sbjct: 343 DAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALV 402
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++ G ++ + ++F+ MP +D V+W+A+I +V N EAF F M R ++ P+ +
Sbjct: 403 HMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGV 462
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T ++L+A L+ G +I+ +K ++ S V + N+L+ + +K G+V A IF +
Sbjct: 463 TYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTM 522
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
R+++++N+MI G++ +G EAL LF +M E PN +TF+ VLSAC+ G V+EG
Sbjct: 523 VRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGR 582
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
+F + I P + Y CMVD+LGRAG L EA LI SM +P +W +LL A R
Sbjct: 583 RFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRI 642
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H NLD+A+ AA+ + ++P YV LS +Y+ G + +VR + + IRK GC+
Sbjct: 643 HGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCT 702
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTK 608
WI + KVH F+ +S + EI L + K
Sbjct: 703 WIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIK 738
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 246/511 (48%), Gaps = 80/511 (15%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N LI Y G EA +IF+++ K VV W +++ GY + G V EA
Sbjct: 96 NTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEA------------- 142
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
F LF M G+ + IT + +AC G +VH V
Sbjct: 143 ------------------FALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQV 184
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
GF D +G ++++MY + G MD+A +VF + RD ++N ++ GY +G+ E+A+
Sbjct: 185 VTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAF 244
Query: 255 RLFERM------PGK-------------DFVSW--------------------TTMITGF 275
LF RM P K + ++W T++I +
Sbjct: 245 ELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMY 304
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
++ G++E + +F+ M +D V+WT +I G+ N E+AF F M + ++P+++T
Sbjct: 305 TTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYM 364
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+++A A +A LN +IH+ V +D+ + +LV +Y+KCG + DA ++F + R
Sbjct: 365 HIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRR 424
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IY 454
++VS+++MI + +NG G EA F MK + P+ +T++++L+AC H+G ++ G IY
Sbjct: 425 DVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIY 484
Query: 455 FKSMKT--LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
+++K + ++ G ++ + + GS+ A + ++M W A++G
Sbjct: 485 TQAIKADLVSHVPLGN----ALIIMNAKHGSVERARYIFDTMVRRDVI-TWNAMIGGYSL 539
Query: 513 HLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
H N A +++ P+S T VLS
Sbjct: 540 HGNAREALYLFDRMLKERFRPNSVTFVGVLS 570
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 203/429 (47%), Gaps = 55/429 (12%)
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
D+ + GG +S T LF+ C G QV + + G +I N++I +Y
Sbjct: 43 DVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLY 102
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------ 261
G + EA ++F + + V+WN+LI+GY G ++EA+ LF +M
Sbjct: 103 SICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFL 162
Query: 262 --------------GK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
GK DF T +++ + G+++ + ++F+ + +
Sbjct: 163 SVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIR 222
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D T+ ++ G+ + +E+AF F M + ++PN+++ S+L L G +H
Sbjct: 223 DVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVH 282
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
A + + D+ + SL+ +Y+ CG++ A R+F N+ R++VS+ MI G+A+NG E
Sbjct: 283 AQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIE 342
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP-GPEHY-- 471
+A LF M++EG+ P++IT++ +++AC + + + + + +I G +
Sbjct: 343 DAFGLFATMQEEGIQPDRITYMHIMNAC----AISANLNHAREIHSQVDIAGFGTDLLVS 398
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTHLNLDLAKLAAQHLME- 528
+V + + G++ +A + ++M P V W A++GA HLM+
Sbjct: 399 TALVHMYAKCGAIKDARQVFDAM---PRRDVVSWSAMIGA-YVENGYGTEAFETFHLMKR 454
Query: 529 --LEPDSAT 535
+EPD T
Sbjct: 455 SNIEPDGVT 463
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 139/315 (44%), Gaps = 42/315 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMP----MRNAVSYAAMITGFVRRGMFYE 56
M R S+ MI N +I +AF +FATM + ++Y ++
Sbjct: 320 MKVRDVVSWTVMIEGYAENG-NIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNH 378
Query: 57 AEELY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
A E++ V++ D + S AL+ Y K G ++A ++F+AM +DVV+W +M+ Y +
Sbjct: 379 AREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVE 438
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G EA F+ F M+R + + +T L
Sbjct: 439 NGYGTEA-------------------------------FETFHLMKRSNIEPDGVTYINL 467
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
ACG G++++ + + LGN++I M + G ++ A +F M +RD
Sbjct: 468 LNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDV 527
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNM 290
++WN++I GY +G EA LF+RM + F V++ +++ S G +++ F
Sbjct: 528 ITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTY 587
Query: 291 MPEKDDVTWTAIISG 305
+ E + T + G
Sbjct: 588 LLEGRGIVPTVKLYG 602
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/498 (34%), Positives = 274/498 (55%), Gaps = 4/498 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A IF + KN + A++ G + FE F+ M + ++ + +T + ++
Sbjct: 93 AISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAA 152
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF----SMMSKRDAVS 236
G +H + +FG ++D + S++ MY ++ + A KVF + +
Sbjct: 153 LSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLI 212
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
WN LI GY G++ +A LF+ MP KD SW ++I GF G++ ++ ELF MPEK+
Sbjct: 213 WNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNV 272
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+WT +++GF N E+A F ML + RPN T+ S LSA A L+ G +IH +
Sbjct: 273 VSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNY 332
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+ + ++ I +LV +Y+KCGN+ A ++F E+ ++ ++ MI G+A +G +A
Sbjct: 333 LSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKA 392
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L F MK G P+ + FL+VL+AC+H G V EG +F +M+ Y IEP +HY +VD
Sbjct: 393 LQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVD 452
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+LGRAG L EA+ I +M P VWGAL A RTH N+++A+LA++ L++LEP
Sbjct: 453 MLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGS 512
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
YV LS+ Y+ +G+ D RVR+ + K PG S+I + K+H F+AG + EI
Sbjct: 513 YVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEI 572
Query: 597 EVTLQTISKGTKEFDWPK 614
L IS +E + K
Sbjct: 573 YSKLDEISASAREKGYTK 590
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 120/221 (54%), Gaps = 4/221 (1%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N LI GY ++G +A +F++M +KD +W S+++G+ K G + A+E+F KMPEKNVV
Sbjct: 214 NVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVV 273
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+WT MV+G+ + E + F M G N T+ AC + G+++H +
Sbjct: 274 SWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYL 333
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
S GF ++++G +++ MY + G ++ A KVF ++ + W+ +I G+ +G +A
Sbjct: 334 SGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKAL 393
Query: 255 RLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
+ FE M D V + ++ S G + + ++ F+ M
Sbjct: 394 QYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNM 434
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 139/344 (40%), Gaps = 76/344 (22%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T I+ SS +++ +I +F K+ + A+I G N ++E + +F+ ML+ +
Sbjct: 78 TQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKIS 137
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC--------- 379
P++LT VL ++AA + G +H ++K +E D ++ SLV +Y K
Sbjct: 138 PDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKV 197
Query: 380 --------------------------GNVVDAYRIFTNIDERNIVSYNS----------- 402
G++V A +F ++ +++ S+NS
Sbjct: 198 FDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDM 257
Query: 403 --------------------MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
M++GF+QNG E+AL F M +EG PN T +S LSAC
Sbjct: 258 GRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSAC 317
Query: 443 NHVGLVEEGFI---YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
+G ++ G Y N+ G +VD+ + G++ A + + T E
Sbjct: 318 AKIGALDAGLRIHNYLSGNGFKLNLVIG----TALVDMYAKCGNIEHAEKVFHE-TKEKG 372
Query: 500 PGVWGALL--GAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
+W ++ A H L +PDS VL+
Sbjct: 373 LLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLN 416
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 46/282 (16%)
Query: 16 LINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSV 72
LI+ C + +A E+F +MP ++ S+ ++I GF++ G A+EL+V MP ++ V
Sbjct: 216 LIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPE--KNVV 273
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEK-------------------------------- 100
+++G+ + G E+A F M+E+
Sbjct: 274 SWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYL 333
Query: 101 -------DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
++V ++VD Y K G + A ++F + EK ++ W+ M+ G+ F
Sbjct: 334 SGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKAL 393
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR-FGFDYDIILGNSIITM 212
F M+ G +S+ + AC + EG++ + R + + + ++ M
Sbjct: 394 QYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDM 453
Query: 213 YGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEA 253
GR G +DEA K M D V W +L + +E A
Sbjct: 454 LGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMA 495
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
++ AS +T L Q IH + + N+ S + +S S +V A IF + +N
Sbjct: 48 LIHASNSTHKLRQ---IHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKN 104
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+N++I G A+N E +++ F M + P+++TF VL +
Sbjct: 105 SYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKS 149
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 193/654 (29%), Positives = 320/654 (48%), Gaps = 67/654 (10%)
Query: 30 FATMPMRNAVSYAAMITGFVRRGMFYEAEEL----------------YVNMPARWRDSVC 73
F + +N S+ ++I+ +VR G ++EA + P + V
Sbjct: 77 FDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV- 135
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+L+ G KV C +F+ E DV S+V Y + G + A ++F MP K+V
Sbjct: 136 --SLVDGK-KVHCC-----VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDV 187
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+W AM+ G+ + + M+ G+ ++IT+ + C + GV +H
Sbjct: 188 GSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLH 247
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
V + G D D+ + N++I MY + G + +A VF M RD VSWNS+I+ Y N + A
Sbjct: 248 VLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTA 307
Query: 254 YRLFERMP----------------------------------------GKDFVSWTTMIT 273
R F+ M KD V ++
Sbjct: 308 LRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVN 367
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQL 332
++ G + + +F+ +P KD ++W +++G+ N EA + M +D PNQ
Sbjct: 368 MYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG 427
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S++ A + L QG +IHA ++K ++ DV + L+ LY KCG + DA +F I
Sbjct: 428 TWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEI 487
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
V +N++I+ +G GEEAL LF+ M E + + ITF+S+LSAC+H GLV+EG
Sbjct: 488 PRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQ 547
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
F M+ Y I+P +HY CMVD+LGRAG L +A +L+ +M +P +WGALL A +
Sbjct: 548 KCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKI 607
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
+ N +L LA+ L+E++ ++ YV+LS++Y+ K +VR + + +RK+PG S
Sbjct: 608 YGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWS 667
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
+++ K +F G ++ EI L+ +S K + P + + +E D
Sbjct: 668 SVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEED 721
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 227/463 (49%), Gaps = 58/463 (12%)
Query: 100 KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL---F 156
+++V +++ Y G + +R FD + +KN+ +W +++ Y++ + + +
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 157 LSMRRGG-MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
SM GG + + T + +AC +G +VH V + GF+ D+ + S++ +Y R
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK------------ 263
G +D A+KVF M +D SWN++ISG+ NG A + RM G+
Sbjct: 169 YGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASI 228
Query: 264 ---------------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
D +I +S G L+ + +F+ M +D
Sbjct: 229 LPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDL 288
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+W +II+ + N A R+F M +RP+ LT+ S+ S + + I
Sbjct: 289 VSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGF 348
Query: 357 VVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
V++ ++ DV I N+LV++Y+K G + A+ +F + ++ +S+N++++G+ QNGL E
Sbjct: 349 VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASE 408
Query: 416 ALNLFRKMKD-EGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYAC 473
A++ + M++ +PNQ T++S++ A +HVG +++G I+ K +K ++ C
Sbjct: 409 AIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA--TC 466
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGV---WGALLGAGRTH 513
++D+ G+ G L +A+ S+ +E P W A++ + H
Sbjct: 467 LIDLYGKCGRLEDAM----SLFYEIPRDTSVPWNAIIASLGIH 505
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 209/479 (43%), Gaps = 92/479 (19%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD----------SVC-- 73
A ++F MP+++ S+ AMI+GF + G A + M VC
Sbjct: 175 AHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQ 234
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
S+ +I+G L + + ++ DV ++++ Y K GR+ +A+ +FD+M +++
Sbjct: 235 SDDVINGVLI------HLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDL 288
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W +++ Y + + F M+ GG+ + +T+ L + R + G
Sbjct: 289 VSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGF 348
Query: 194 VSRFG-FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG---E 249
V R D D+++GN+++ MY +LG+M+ A+ VF + ++D +SWN+L++GY NG E
Sbjct: 349 VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASE 408
Query: 250 IEEAYRLFER----MPGK---------------------------------DFVSWTTMI 272
+AY + E +P + D T +I
Sbjct: 409 AIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLI 468
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
+ G LE ++ LF +P V W AII+ + + EEA + F +ML + V+ + +
Sbjct: 469 DLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHI 528
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S+LSA + + +++G + M+ + I+ SL
Sbjct: 529 TFVSLLSACSHSGLVDEGQKCFD-----IMQKEYGIKPSL-------------------- 563
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
Y M+ + G E+A L R M + P+ + ++LSAC G E G
Sbjct: 564 -----KHYGCMVDLLGRAGYLEKAYELVRNMP---IQPDASIWGALLSACKIYGNAELG 614
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 144/292 (49%), Gaps = 40/292 (13%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++H L+ FG +I+L +I +Y G + + F + K++ SWNS+IS YV G
Sbjct: 40 KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99
Query: 249 EIEEAY----RLFERMPG----KDFVSWTTMITG-------------------------- 274
+ EA +LF G DF ++ ++
Sbjct: 100 KYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVA 159
Query: 275 ------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+S G L+ + ++F MP KD +W A+ISGF N A M + V+
Sbjct: 160 ASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVK 219
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ +T++S+L A + + G IH HV+K ++SDV + N+L+++YSK G + DA +
Sbjct: 220 MDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMV 279
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
F ++ R++VS+NS+I+ + QN AL F+ M+ G+ P+ +T +S+ S
Sbjct: 280 FDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTS 331
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ +N ++HA ++ ++ + L++LY G++ + F I ++NI S+NS
Sbjct: 31 SCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNS 90
Query: 403 MISGFAQNGLGEEALN----LFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+IS + + G EA+N LF L P+ TF +L AC V LV+
Sbjct: 91 IISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLVD 139
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/508 (34%), Positives = 275/508 (54%), Gaps = 33/508 (6%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
V + V+ ++V Y + AR +FD+MP+++VV+WT +VDGY + ++ + +F
Sbjct: 172 VAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFC 231
Query: 158 SMR-RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
M GG+ N +TL + A G+ G V+ V+ G + L N++I M+G+
Sbjct: 232 RMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKF 291
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFS 276
G A +VF M+ KD SWTTM+ ++
Sbjct: 292 GCAASAREVFDSMAV-------------------------------KDVYSWTTMVNAYA 320
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G+LE + LF+ MP ++ V+W+ +I+ + Q EEA R F M+ + V P L S
Sbjct: 321 KCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVS 380
Query: 337 VLSASAATATLNQGSQIH-AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
VLSA A L+ G I+ +V+ V++ N+ + +Y+KCG+ A ++F + ER
Sbjct: 381 VLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAER 440
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYF 455
N+VS+NSMI A +G EE L LF ++K +VP++ITFL +LSAC+H GLV EG YF
Sbjct: 441 NVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYF 500
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLN 515
K MK +Y IEP EHYACM+D+LG+ G L EA ++ M E WGALL A R + N
Sbjct: 501 KEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGALLNACRMYGN 560
Query: 516 LDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWII 575
+++ + AA L++L P + YV++S +Y+ K +R+ + + ++K+PGCS I
Sbjct: 561 VEIGEFAADKLVQLNPLDSGIYVLMSQIYASKNKWDQVKILRVLMRERGVKKNPGCSSIE 620
Query: 576 LKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ K H FL S + ++I L+ I
Sbjct: 621 VDGKFHEFLVADVSHVHSEDIYAALKNI 648
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 175/412 (42%), Gaps = 86/412 (20%)
Query: 19 NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA------------ 66
N+ S+ A +F MP R+ VS+ ++ G+ RRG+ EA ++ M
Sbjct: 188 NHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGLQPNEVTLV 247
Query: 67 -------------------RW-------RDSVCSNALISGYLKVGRCEEAARIFEAMVEK 100
R+ R NALI + K G A +F++M K
Sbjct: 248 AVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVK 307
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV +W +MV+ Y K G + A +FD MP +N V+W+ M+ Y + + E+ LF +M
Sbjct: 308 DVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMI 367
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII---------LGNSIIT 211
G+ + L + AC + G R+ +D +I LGN+ I
Sbjct: 368 EEGVEPINAGLVSVLSACAQLGCLDLG--------RWIYDNYVISGKAVLTVNLGNAFID 419
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTM 271
+Y + G D A+K+F+ M++R+ VSWNS+I + +G+ EE RLFE++ G V
Sbjct: 420 VYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIV----- 474
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM-LRKDVRPN 330
D++T+ ++S ++ E R+F EM L + P
Sbjct: 475 ----------------------PDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPK 512
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ ++ L + ++ M ME+D + +L++ GNV
Sbjct: 513 SEHYACMIDLLGKIGLLEEAFEV---AKGMPMETDEAGWGALLNACRMYGNV 561
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 105/206 (50%), Gaps = 16/206 (7%)
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA---TLNQGSQIHAHVV 358
++ F+ A F ++R+ + + TL + A+A+ + + G +H +
Sbjct: 108 MMRAFLRARLPSRASALFRRVIRESLPADARTLVFAIKAAASEHEHHSPSGGEGVHCVAL 167
Query: 359 KM-NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
K ++ V + N+LV Y+ ++ A +F + +R++VS+ +++ G+A+ GL +EA
Sbjct: 168 KWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAW 227
Query: 418 NLF-RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK-----SMKTLYNIEPGPEHY 471
+F R + GL PN++T ++V+SA +GL+ G + ++ + N+E
Sbjct: 228 RVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENA---- 283
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFE 497
++D+ G+ G A A ++ +SM +
Sbjct: 284 --LIDMFGKFGCAASAREVFDSMAVK 307
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/640 (30%), Positives = 319/640 (49%), Gaps = 59/640 (9%)
Query: 25 EAFEIFATMPMR-NAVSYAAMITGFVRRGMFYEAEELY----------VNMPARWRDSVC 73
EA +F + R N V++ MI GF G++ + E Y V+ S C
Sbjct: 192 EARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSAC 251
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+ K C+ FE D S++ Y K + A ++F+++P+K +
Sbjct: 252 GQGEFVSFGKQVHCDAIKVGFE----DDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEI 307
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
W A++ Y+ D ++ M+ + +S T+ + + Y G +H
Sbjct: 308 ELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTE 367
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ + I + ++++TMY + G + AN +FS M +RD V+W S+ISG+ N + +EA
Sbjct: 368 IVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEA 427
Query: 254 YRLFERM------PGKDF-------------VSWTTMITGFSSKGNL------------- 281
F M P D V I GF K L
Sbjct: 428 LDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDM 487
Query: 282 -------EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
E++ +F+ MP K+ V W +IIS + N + + F ++LR D+ P+ ++
Sbjct: 488 YSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSF 547
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+SVL+A ++ A L +G +H ++V++ + D+ ++N+L+ +Y KCG + A IF I E
Sbjct: 548 TSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISE 607
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+N+V++NSMI G+ +G +A+ LF +M+ G+ P+ +TFLS+LS+CNH GL+EEG
Sbjct: 608 KNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHL 667
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F+ MK + IEP EHY +VD+ GRAG L +A + +M EP +W +LL + + HL
Sbjct: 668 FEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHL 727
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
NL+L ++ A L+ +EP + YV L +LY +R K K ++K+PGCSWI
Sbjct: 728 NLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWI 787
Query: 575 ILKDKVHLFLAGRKSCLDLKEIEVTLQT-----ISKGTKE 609
+++KV +F +G S EI TL + I KG K
Sbjct: 788 EVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNMIKKGAKH 827
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 236/472 (50%), Gaps = 62/472 (13%)
Query: 42 AAMITGFVRRGMFYEAEELYVNMP---ARWRDSVCSNALISGYLKVGRCEEA-------- 90
+++I +V+ G F +A +++ +P D N++I GY + G+ EE
Sbjct: 92 SSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQ 151
Query: 91 -----------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK-NVVAWTA 138
+ I M+ D +++D Y K GR EAR +F K+ ++ N+VAW
Sbjct: 152 SSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNV 211
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ G+ + +E+ + +L + + S + T ACG+ G QVH + G
Sbjct: 212 MIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVG 271
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
F+ D + S++TMYG+ ++ A KVF+ + ++ WN+LIS YV NG +A R+++
Sbjct: 272 FEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYK 331
Query: 259 RM--------------------------------------PGKDFVS-WTTMITGFSSKG 279
+M P + ++ + ++T +S G
Sbjct: 332 QMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFG 391
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+ + +F+ M E+D V W ++ISGF N +Y+EA +F M V+P+ ++S++S
Sbjct: 392 DSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIIS 451
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A ++ G IH V+K ++ DV + +SL+ +YSK G A IF+++ +N+V+
Sbjct: 452 ACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVA 511
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+NS+IS + +N L + ++NLF ++ L P+ ++F SVL+A + V + +G
Sbjct: 512 WNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKG 563
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 145/307 (47%), Gaps = 25/307 (8%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T L +AC + G +H + G D + +S+I +Y + G +A KVF +
Sbjct: 55 TYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQL 114
Query: 230 SKR-----DAVSWNSLISGYVHNGEIEEAYRLFERMP------GKDFVSW---------- 268
K D WNS+I GY G++EE F RM GK S+
Sbjct: 115 PKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQIHSYIVRNMLNFDP 174
Query: 269 ---TTMITGFSSKGNLEKSIELFNMMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLR 324
T +I + G ++ LF + ++ + V W +I GF N +E + +++
Sbjct: 175 FLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKT 234
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVD 384
++V+ + + LSA ++ G Q+H +K+ E D + SL+++Y KC +
Sbjct: 235 ENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIES 294
Query: 385 AYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH 444
A ++F + ++ I +N++IS + NG +AL ++++MK ++ + T L+VL++ +
Sbjct: 295 AEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSM 354
Query: 445 VGLVEEG 451
GL + G
Sbjct: 355 AGLYDLG 361
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 30/248 (12%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEK----DDVT-WTAIISGFVNNEQYEEAFRWFIEML 323
+++I + G ++++F+ +P+ DDVT W +II G+ Q EE F M
Sbjct: 92 SSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRM- 150
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
++ +G QIH+++V+ + D ++ +L+ Y KCG
Sbjct: 151 -------------------QSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPT 191
Query: 384 DAYRIFTNIDER-NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+A +F + +R NIV++N MI GF +NGL E +L + K E + +F LSAC
Sbjct: 192 EARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSAC 251
Query: 443 NHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
V G ++ ++K E P + ++ + G+ + A + N + +
Sbjct: 252 GQGEFVSFGKQVHCDAIKV--GFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVP-DKEIE 308
Query: 502 VWGALLGA 509
+W AL+ A
Sbjct: 309 LWNALISA 316
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
I V QY EA + + + V + T S+L A A+ + L G IH+ ++ +
Sbjct: 28 IKSLVQQRQYIEALKLYT---KSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER-----NIVSYNSMISGFAQNGLGEEAL 417
SD I +SL+++Y KCG DA ++F + + ++ +NS+I G+ + G EE +
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144
Query: 418 NLFRKMKDEG 427
F +M+ G
Sbjct: 145 VQFGRMQSSG 154
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 234/371 (63%), Gaps = 6/371 (1%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
++ ++ G + + ++F M +KD ++WT++++G V+N YEEA R F EM +
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P+Q+ +++VLSA A L G Q+HA+ +K + S +S+ NSLVS+Y+KCG + DA ++
Sbjct: 66 PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 125
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F +++ ++++++ ++I G+AQNG G E+LN + M G+ P+ ITF+ +L AC+H GLV
Sbjct: 126 FDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLV 185
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
E G YF+SM+ +Y I+PGPEHYACM+D+LGR+G L EA +L+N M +P VW ALL
Sbjct: 186 EHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLA 245
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R H N++L + AA +L ELEP +A PYV+LS+LYS GK + + R KL+ + K
Sbjct: 246 ACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKE 305
Query: 569 PGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE------FDWPKHDWSLLGL 622
PGCSWI + KVH F++ +S EI + I KE ++ HD G
Sbjct: 306 PGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGK 365
Query: 623 ERDWSYTADNI 633
E +Y ++ +
Sbjct: 366 ELGLAYHSEKL 376
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 147/329 (44%), Gaps = 40/329 (12%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
++VD Y K G A ++F+KM +K+V++WT++V G + +E+ LF MR G+
Sbjct: 7 ALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHP 66
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ I + + AC G QVH + G + + NS+++MY + G +++ANKVF
Sbjct: 67 DQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVF 126
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLE 282
M +D ++W +LI GY NG E+ + M DF+++ ++ S G +E
Sbjct: 127 DSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGLVE 186
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
F M E + + E + I++L + + +
Sbjct: 187 HGRSYFQSMEEVYGI------------KPGPEHYACMIDLLGRSGKLME----------- 223
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE---RNIVS 399
A LNQ M ++ D ++ +L++ GNV R N+ E +N V
Sbjct: 224 AKELLNQ----------MAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVP 273
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGL 428
Y + + ++ G EEA R MK G+
Sbjct: 274 YVLLSNLYSAAGKWEEAAKTRRLMKLRGV 302
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 122/271 (45%), Gaps = 44/271 (16%)
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP-- 261
++ N+++ MY + G+ D A VF M+ +D +SW SL++G VHNG EEA RLF M
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 262 -------------------------------------GKDFVSWTTMITGFSSKGNLEKS 284
G ++++ ++ G +E +
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 122
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
++F+ M +D +TWTA+I G+ N + E+ ++ +M+ V+P+ +T +L A +
Sbjct: 123 NKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHA 182
Query: 345 ATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNS 402
+ G + ++ ++ ++ L + G +++A + + + + + +
Sbjct: 183 GLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKA 242
Query: 403 MISGFAQNG---LGEEALNLFRKMKDEGLVP 430
+++ +G LGE A N +++ + VP
Sbjct: 243 LLAACRVHGNVELGERAANNLFELEPKNAVP 273
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 131/284 (46%), Gaps = 25/284 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP--ARWRDSVCSNALISG--- 80
AF++F M ++ +S+ +++TG V G + EA L+ M D + A++S
Sbjct: 21 AFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAE 80
Query: 81 --YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
L+ G+ + A ++ + + S+V Y K G + +A ++FD M ++V+ WTA
Sbjct: 81 LTVLEFGK-QVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTA 139
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG------ 192
++ GY + + + + M G+ + IT L AC G+ HG
Sbjct: 140 LIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACS-----HAGLVEHGRSYFQS 194
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIE 251
+ +G +I + GR G + EA ++ + M+ + DA W +L++ +G +E
Sbjct: 195 MEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVE 254
Query: 252 EAYR----LFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
R LFE P K+ V + + +S+ G E++ + +M
Sbjct: 255 LGERAANNLFELEP-KNAVPYVLLSNLYSAAGKWEEAAKTRRLM 297
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ N+LV +Y+K G A+ +F + +++++S+ S+++G NG EEAL LF +M+ G
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 428 LVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+ P+QI +VLSAC + ++E G ++ +K+ ++ +V + + G + +
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN--SLVSMYAKCGCIED 121
Query: 487 AIDLINSMTFEPPPGVWGALL------GAGRTHLNL 516
A + +SM + W AL+ G GR LN
Sbjct: 122 ANKVFDSMEIQDVI-TWTALIVGYAQNGRGRESLNF 156
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/518 (34%), Positives = 278/518 (53%), Gaps = 45/518 (8%)
Query: 98 VEKDVVAWGSMVDGYCKKG-RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF 156
++ D S++ Y K G + EAR +FD + K++++WT+M+ GY+KV+ + +LF
Sbjct: 91 LDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELF 150
Query: 157 LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
L M G+ N TL+ + +AC R G HG+V GFD + ++ ++I MYGR
Sbjct: 151 LEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRN 210
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVSWTTM 271
+D+A VF + + DA+ W S+IS + N ++A F M K D ++ T+
Sbjct: 211 SAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTV 270
Query: 272 ITGFSSKGNLEKSIEL-----------------------------------FNMMPEKDD 296
+T + G L++ E+ F+ M K+
Sbjct: 271 LTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNL 330
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V+WTA++ G+ N +E R F R+ + + + +VL A A A + QG ++H
Sbjct: 331 VSWTALLGGYCQNGDFESVIRIF----REGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQ 386
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
VK DV +++LV LY+KCG + AYRIF + RN++++NSMI GFAQNG G E
Sbjct: 387 YVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEV 446
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
LF +M +EG+ P+ I+F+ VL AC+H GLV++G YF +M +Y I+PG EHY CM+D
Sbjct: 447 FQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMID 506
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+LGRAG L EA +LI + P +W LLGA + A+ A+ +EL+PD
Sbjct: 507 LLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDHHLS 566
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
YV L+++Y +G+ D ++R + + K PG SWI
Sbjct: 567 YVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMPGTSWI 604
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 208/431 (48%), Gaps = 45/431 (10%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
N+++ +++EA +F + ++ +S+ +MITG+V+ ++ EL++ M
Sbjct: 99 NSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGI 158
Query: 65 -PARWRDSVCSNALIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
P + S A G L++G+C + DV++ +++D Y + V +A
Sbjct: 159 EPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVIS-TALIDMYGRNSAVDDAI 217
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRF 181
+F ++P+ + + WT+++ + + D ++ F SM R+ G++ + T + ACG
Sbjct: 218 LVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNL 277
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
R ++G +VH V G ++ + +S++ MYG+ ++++ VF MS ++ VSW +L+
Sbjct: 278 GRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALL 337
Query: 242 SGYVHNGEIEEAYRLF-----------------------------------ERMPGKDFV 266
GY NG+ E R+F +R +D V
Sbjct: 338 GGYCQNGDFESVIRIFREGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVV 397
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+ + ++ ++ G ++ + +F M ++ +TW ++I GF N + E F+ F EM+ +
Sbjct: 398 TESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEG 457
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM-NMESDVSIQNSLVSLYSKCGNVVDA 385
+RP+ ++ VL A + ++QG + A + ++ ++ + N ++ L + G + +A
Sbjct: 458 IRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEA 517
Query: 386 YRIFTNIDERN 396
+ N + R+
Sbjct: 518 ENLIENANCRD 528
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 156/320 (48%), Gaps = 47/320 (14%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG-FMDEANKVFSMMSKR 232
L + C + + G+Q H + G D D +GNS++ +Y +LG + EA +VF + +
Sbjct: 66 LLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYK 125
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMPG------------------------------ 262
D +SW S+I+GYV + +++ LF M G
Sbjct: 126 DLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFH 185
Query: 263 ----------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D +S T +I + ++ +I +F +P+ D + WT+IIS F N+ Y
Sbjct: 186 GVVMVRGFDLNDVIS-TALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVY 244
Query: 313 EEAFRWFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
++A +F M RK + P+ T +VL+A L QG ++HA V+ + +V +++S
Sbjct: 245 DKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESS 304
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
LV +Y KC V + +F + +N+VS+ +++ G+ QNG E + +FR EG +
Sbjct: 305 LVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFR----EGKKVD 360
Query: 432 QITFLSVLSACNHVGLVEEG 451
+F +VL AC + V +G
Sbjct: 361 TYSFGTVLRACAGLAAVRQG 380
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 115/231 (49%), Gaps = 11/231 (4%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG-NVVDAYRIFTNID 393
+S+L + G Q H+H +K +++D + NSL++LY K G N+ +A R+F +
Sbjct: 64 ASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLF 123
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
++++S+ SMI+G+ + +++L LF +M G+ PN T +V+ AC+ +G + G
Sbjct: 124 YKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKC 183
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
F + + + ++D+ GR ++ +AI + + +P W +++ A +
Sbjct: 184 -FHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELP-QPDAICWTSIISAFTRN 241
Query: 514 LNLDLA-----KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
D A + +H L PD T VL+ + +G+ + G V K
Sbjct: 242 DVYDKALGFFYSMCRKH--GLSPDGFTFGTVLTACGN-LGRLKQGKEVHAK 289
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 121/303 (39%), Gaps = 67/303 (22%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMF-------------------------------YEA 57
+F M ++N VS+ A++ G+ + G F +
Sbjct: 321 VFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFREGKKVDTYSFGTVLRACAGLAAVRQG 380
Query: 58 EELYVNMPAR--WRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
+E++ R WRD V +AL+ Y K G + A RIF M ++++ W SM+ G+ +
Sbjct: 381 KEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQN 440
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
GR E ++FD+M E+ + G + C G + +G F ++T
Sbjct: 441 GRGGEVFQLFDEMIEEGIRPDYISFVGVL-FACSHAGL-----VDQGKKYFAAMT----- 489
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+ + G++ + N +I + GR G ++EA + + RD
Sbjct: 490 ----EVYEIKPGIEHY---------------NCMIDLLGRAGLLEEAENLIENANCRDEP 530
Query: 236 S-WNSLISGYV---HNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
S W L+ H+ E + + +S+ + + + G + ++++ N+M
Sbjct: 531 SLWTVLLGACAASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLM 590
Query: 292 PEK 294
++
Sbjct: 591 TKR 593
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 275/478 (57%), Gaps = 10/478 (2%)
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+M E NV + A+ G++ +L++ M R ++ +S T + L +A R+ E
Sbjct: 85 QMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGE 144
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
+Q H + +FGF + + + ++I Y G + EA KVF M +RD ++W +++S Y
Sbjct: 145 SLQAH--IWKFGFGFHVKIQTTLIDFYSATGGIREARKVFDEMPERDDIAWTTMVSAYRR 202
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+++ A L +M K+ + +I G+ GNLE++ LFN MP KD ++WT +I G+
Sbjct: 203 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 262
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N++Y EA F +M+ + + P+++T+S+V+SA A L G ++H + ++ DV
Sbjct: 263 SQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDV 322
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
I ++LV +YSKCG++ A +F N+ ++N+ +NS+I G A +G +EAL +F KM+ E
Sbjct: 323 YIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEME 382
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+ PN +TF+SV +AC H GLV+EG ++SM Y+I EHY MV + +AG + E
Sbjct: 383 SVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYE 442
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A++LI +M FEP +WGALL R H NL +A++A LM LEP ++ Y +L +Y+
Sbjct: 443 ALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAE 502
Query: 547 IGKKRDGNRVRMKKKLKRIRK-SPGCSWIILKDKVHLFLAGRKS-------CLDLKEI 596
+ RD +R + + I K PG S I + + HLF A KS CL L EI
Sbjct: 503 QNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 560
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 129/252 (51%), Gaps = 6/252 (2%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV 103
+I + G EA +++ MP R D + ++S Y +V + A + M EK+
Sbjct: 165 LIDFYSATGGIREARKVFDEMPER--DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEA 222
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
+++GY G + +A +F++MP K++++WT M+ GY + + + +F M G
Sbjct: 223 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 282
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+ + +T++ + AC G +VH + GF D+ +G++++ MY + G ++ A
Sbjct: 283 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 342
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKG 279
VF + K++ WNS+I G +G +EA ++F +M + + V++ ++ T + G
Sbjct: 343 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 402
Query: 280 NLEKSIELFNMM 291
+++ ++ M
Sbjct: 403 LVDEGRRIYRSM 414
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 198/465 (42%), Gaps = 81/465 (17%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N ITA + C + A M N Y A+ GFV + ELYV M R
Sbjct: 64 NQFITACTSFKC-LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRM---LR 119
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG---------SMVDGYCKKGRVIE 120
DSV ++ Y + + A F ++ + +G +++D Y G + E
Sbjct: 120 DSVSPSSYT--YSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGGIRE 177
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD+MPE++ +AWT MV Y +V L M N ++
Sbjct: 178 ARKVFDEMPERDDIAWTTMVSAYRRV----------LDMDSANSLANQMS---------- 217
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ + N +I Y LG +++A +F+ M +D +SW ++
Sbjct: 218 -------------------EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTM 258
Query: 241 ISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLE--KSIELFNMMPE- 293
I GY N EA +F +M + D V+ +T+I+ + G LE K + ++ +
Sbjct: 259 IKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGF 318
Query: 294 -KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
D +A++ + E A F + +K N +S++ AA + +
Sbjct: 319 VLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWNSIIEGLAAHGFAQEALK 374
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKC---GNVVDAYRIFTN-IDERNIVS----YNSMI 404
+ A KM MES + VS+++ C G V + RI+ + ID+ +IVS Y M+
Sbjct: 375 MFA---KMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMV 431
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-HVGLV 448
F++ GL EAL L M+ E PN + + ++L C H LV
Sbjct: 432 HLFSKAGLIYEALELIGNMEFE---PNAVIWGALLDGCRIHKNLV 473
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 139/336 (41%), Gaps = 81/336 (24%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
IT +S L+ ++ M E + + A+ GFV + ++ MLR V P+
Sbjct: 67 ITACTSFKCLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSS 126
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T SS++ AS+ + G + AH+ K V IQ +L+ YS G + +A ++F
Sbjct: 127 YTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGGIREARKVFDE 184
Query: 392 IDERNIVSYNSMISGFAQ-----------------------------NGLG--EEALNLF 420
+ ER+ +++ +M+S + + GLG E+A +LF
Sbjct: 185 MPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLF 244
Query: 421 R-------------------------------KMKDEGLVPNQITFLSVLSACNHVGLVE 449
KM +EG++P+++T +V+SAC H+G++E
Sbjct: 245 NQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE 304
Query: 450 EG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG---VW 503
G +Y + ++ G + +VD+ + GSL A+ + F P W
Sbjct: 305 IGKEVHMYTLQNGFVLDVYIG----SALVDMYSKCGSLERALLVF----FNLPKKNLFCW 356
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
+++ H A+ A + ++E +S P V
Sbjct: 357 NSIIEGLAAH---GFAQEALKMFAKMEMESVKPNAV 389
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 26/185 (14%)
Query: 355 AHVVKMNMESDVSIQNSLVSLYS--KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
A ++K ++ D + N ++ + KC ++ A T + E N+ YN++ GF
Sbjct: 49 AAMIKTSLNQDCRLMNQFITACTSFKCLDL--AVSTMTQMQEPNVFVYNALFKGFVTCSH 106
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE---------GFIYFKSMKTLYN 463
+L L+ +M + + P+ T+ S++ A + E GF + ++T
Sbjct: 107 PIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQT--- 163
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
++D G + EA + + M E W ++ A R L++D A A
Sbjct: 164 ---------TLIDFYSATGGIREARKVFDEMP-ERDDIAWTTMVSAYRRVLDMDSANSLA 213
Query: 524 QHLME 528
+ E
Sbjct: 214 NQMSE 218
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 25 EAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN----- 75
EA ++FA M M NAV++ ++ T G+ E +Y +M + S+ SN
Sbjct: 371 EALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY--SIVSNVEHYG 428
Query: 76 ALISGYLKVGRCEEAARIFEAM-VEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
++ + K G EA + M E + V WG+++DG ++ A F+K+
Sbjct: 429 GMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 482
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 197/624 (31%), Positives = 317/624 (50%), Gaps = 101/624 (16%)
Query: 12 MITALIN--NNCS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
M+T LI +C ++ A +F MP N ++ A+ ++R GM+ + + Y M ++
Sbjct: 32 MLTKLIQMYADCDHLFSAQRLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGFM--KY 89
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEA--MVEKDVVAWG---------SMVDGYCKKGR 117
D + N + + KV R FE + KDV+ G S++D Y K G
Sbjct: 90 SDVLPDNYV---FPKVLRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGN 146
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
AR +F++M E+++ +W +M+ GY+ + +L MR G
Sbjct: 147 ARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDG-------------- 192
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
F+ D++ N+++ Y ++G DEA +V + + + +SW
Sbjct: 193 ---------------------FEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISW 231
Query: 238 NSLISGYVHNGEIEEAYRLFERM---------------------------PGKDFVSWTT 270
+LIS Y GE + + R+F+ M GK+ + T
Sbjct: 232 TTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGT 291
Query: 271 ---------------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
++T ++ G ++ +I +F +M + D VTW A+I GFV + ++A
Sbjct: 292 KMETNTVFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQA 351
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVS 374
F EM R D++ +Q T+S++L L G+ IHA+V K + + S V++ N+++
Sbjct: 352 IECFREMQRMDIKNDQTTISTIL----PVCDLQYGNPIHAYVRKSITLSSVVTVWNAVIH 407
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y KCG V AY IF ++ +++VS+N+MI GF +G G+ AL L ++M G+ PN T
Sbjct: 408 MYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTT 467
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F SVLSAC+H GLV+EGF F+SM Y+I P EHY+C+VD+L RAG A+A+ I+ M
Sbjct: 468 FTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKM 527
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
EP +WGALL A R + NLD +LAA+ L+ +EP A YV LS++Y+ G+ D
Sbjct: 528 PLEPDKSIWGALLAACRAYQNLDFGRLAAEQLIRMEPKCAGHYVTLSNIYARAGRWDDAG 587
Query: 555 RVRMKKKLKRIRKSPGCSWIILKD 578
RVR + + K + K G S I +D
Sbjct: 588 RVRKEIEGKGLVKPSGQSLIETRD 611
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 225/458 (49%), Gaps = 28/458 (6%)
Query: 100 KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM 159
KD ++ Y + A+ +FDKMP+ NV AWTA+ Y++ ++ + M
Sbjct: 28 KDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGFM 87
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
+ + ++ + AC + + G+ +H V G + ++ + NS+I MY + G
Sbjct: 88 KYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNA 147
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE--RMPG--KDFVSWTTMITGF 275
A VF M +RD SWNS+ISGYV NG + A L R+ G D V+W T++ +
Sbjct: 148 RSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAY 207
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM-LRKDVRPNQLTL 334
G +++ E+ + + + ++WT +IS + +++ + R F +M +R+ V P+ L
Sbjct: 208 CQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCL 267
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDV--SIQNSLVSLYSKCGNVVDAYRIFTNI 392
SVL + L G +IH + KM + S +L+++Y+KCG + DA +F +
Sbjct: 268 CSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVFELM 327
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC-----NHVGL 447
D+ +IV++N+MI GF + LG++A+ FR+M+ + +Q T ++L C N +
Sbjct: 328 DKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCDLQYGNPIHA 387
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGA 505
I S+ T++N ++ + + G + A + SM P V W
Sbjct: 388 YVRKSITLSSVVTVWNA---------VIHMYCKCGCVRSAYTIFCSM---PNKDVVSWNT 435
Query: 506 LLGAGRTHLNLDLA-KLAAQHLME-LEPDSATPYVVLS 541
++G H + A KL + ++ + P+S T VLS
Sbjct: 436 MIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLS 473
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%)
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
GKD T +I ++ +L + LF+ MP+ + WTAI ++ + Y++ + +
Sbjct: 27 GKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGF 86
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
M DV P+ VL A G IH V+ ES++ + NSL+ +Y KCGN
Sbjct: 87 MKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGN 146
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
A +F ++ER++ S+NSMISG+ NGL + A+ L M+ +G P+ +T+ +++ A
Sbjct: 147 ARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDA 206
Query: 442 CNHVGLVEEGFIYFKSMK 459
+G +E + K ++
Sbjct: 207 YCQMGRFDEAWEVLKQIE 224
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/398 (19%), Positives = 154/398 (38%), Gaps = 80/398 (20%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C G Q+H ++ G+ D + +I MY + A ++F M + +
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS----------------W--------- 268
+W ++ Y+ +G ++ + + M D + W
Sbjct: 61 VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120
Query: 269 --------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
++I + GN + +F M E+D +W ++ISG+V+N +
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADL 180
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A + +R D E DV N+L+
Sbjct: 181 AVE-LLNCMRLD----------------------------------GFEPDVVTWNTLMD 205
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQI 433
Y + G +A+ + I++ NI+S+ ++IS +++ G + +L +F+ M +V P+
Sbjct: 206 AYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLD 265
Query: 434 TFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
SVL +C H+G + G I+ K N A ++ + + G + +AI++
Sbjct: 266 CLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVFE 325
Query: 493 SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE 530
M + W A++ + LDL K A + E++
Sbjct: 326 LMD-KSDIVTWNAMILG---FVELDLGKQAIECFREMQ 359
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 108/244 (44%), Gaps = 14/244 (5%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+L + +L+ G QIH + D + L+ +Y+ C ++ A R+F + + N
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+ ++ ++ + ++G+ ++ + + MK ++P+ F VL AC + L EG I+
Sbjct: 61 VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQL-LWFEGGIWIH 119
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
+ E + ++D+ + G+ A + L+ E W +++ +++
Sbjct: 120 KDVIVCGCESNLQVCNSLIDMYVKCGN-ARSARLVFEEMEERDLFSWNSMISG---YVSN 175
Query: 517 DLAKLAAQHLMELEPDSATPYVV----LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
LA LA + L + D P VV L D Y +G+ + V LK+I + S
Sbjct: 176 GLADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEV-----LKQIEQPNIIS 230
Query: 573 WIIL 576
W L
Sbjct: 231 WTTL 234
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/613 (31%), Positives = 307/613 (50%), Gaps = 72/613 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA--- 57
M + + S+N +I+ ++ A +F MP +N +++ +MI G+ G EA
Sbjct: 99 MPHKDAFSWNVVISGFAKEG-NLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGL 157
Query: 58 -EELYVNMPARWR------------------------------------DSVCSNALISG 80
++L +N R+ DSV ++L++
Sbjct: 158 FKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNL 217
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
Y K G + A + M E D + +++ GY GR+ +AR IF VV W +M+
Sbjct: 218 YGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMI 277
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY+ + + +LF +MRR G+ + T + AC +G+QVH V + GF
Sbjct: 278 SGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFT 337
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
DII+ ++++ MY + D+A K+FS + D + NS
Sbjct: 338 NDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNS--------------------- 376
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
MIT +S+ G ++ + ++F+ MP K ++W ++I GF N EA F
Sbjct: 377 ----------MITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFC 426
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
EM + +R ++ +L+ V+SA A+ ++L G QI A + +E D I SLV Y KCG
Sbjct: 427 EMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCG 486
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
V ++F + + + V +NSM+ G+A NG G EALN+F +M+ G+ P ITF+ VLS
Sbjct: 487 LVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLS 546
Query: 441 ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP 500
AC+H GLVEEG +F +MK Y+I PG EHY+CMVD+ RAG L +A++LI M +
Sbjct: 547 ACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADT 606
Query: 501 GVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKK 560
+W ++L H N L K A+ +++L+P+++ YV LS +Y+ +VR
Sbjct: 607 SMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLM 666
Query: 561 KLKRIRKSPGCSW 573
K+I K PGCSW
Sbjct: 667 YDKKIPKVPGCSW 679
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 252/532 (47%), Gaps = 80/532 (15%)
Query: 18 NNNCSIYEAFEIFATMPMRNAVSYAAMITG------FVRRGMFYEAEELYVNMPARWRDS 71
NN SIY + + +++ V ++ + G + R EA++L+ MP R +
Sbjct: 17 NNYGSIYRG-RLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKR--NC 73
Query: 72 VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
N +I GYLK G ++ +F++M KD +W ++ G+ K+G + AR +F++MP K
Sbjct: 74 FSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWK 133
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM---AFNSITLTILFEACGRFFRYREGV 188
N +AW +M+ GY ++ LF + + ++ L + AC G
Sbjct: 134 NGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGK 193
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + ++D +LG+S++ +YG+ G +D AN V ++M + DA S ++LISGY G
Sbjct: 194 QIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCG 253
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
+ +A R+F V W +MI+G+ + +++ELFN
Sbjct: 254 RMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFN------------------- 294
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI 368
M RK V+ + T +SVLSA + ++QG Q+HAHV K+ +D+ I
Sbjct: 295 ------------NMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIII 342
Query: 369 Q-------------------------------NSLVSLYSKCGNVVDAYRIFTNIDERNI 397
NS++++YS CG + DA +IF + +++
Sbjct: 343 DSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSL 402
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
+S+NSMI GF+QN EAL+LF +M GL ++ + V+SAC + +E G F +
Sbjct: 403 ISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIF-A 461
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM--TFEPPPGVWGALL 507
T+ +E +VD + G + L + M + E P W ++L
Sbjct: 462 RATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVP---WNSML 510
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 163/316 (51%), Gaps = 45/316 (14%)
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDII-LGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+C + G +H L + G + ++ +GN ++ MY R M EA ++F M KR+
Sbjct: 15 SCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNCF 74
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
SWN++I GY+ +G ++ LF+ MP KD SW +I+GF+ +GNLE + LFN MP K+
Sbjct: 75 SWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWKN 134
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL--------TLSSVLSASAATATL 347
+ W ++I G+ N + +EA F KD+ N L L++V+ A L
Sbjct: 135 GIAWNSMIHGYACNGRPKEAVGLF-----KDLSLNPLERFCGDTFVLATVVGACTNLGAL 189
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV------------------------- 382
+ G QIHA +V +E D + +SLV+LY KCG++
Sbjct: 190 DCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGY 249
Query: 383 ------VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
DA RIF +V +NSMISG+ N EAL LF M+ +G+ + TF
Sbjct: 250 ASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFA 309
Query: 437 SVLSACNHVGLVEEGF 452
SVLSAC+ +G++++G
Sbjct: 310 SVLSACSTLGIIDQGI 325
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 195/640 (30%), Positives = 317/640 (49%), Gaps = 84/640 (13%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR-- 67
N ++T +N ++ A ++F +P RN ++ +I+GF R G L+ M A+
Sbjct: 328 NHLLTLYAKSN-NMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGA 386
Query: 68 ----------------------------WR-------DSVCSNALISGYLKVGRCEEAAR 92
W D V N+++ YLK E A R
Sbjct: 387 CPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAER 446
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
+FE M E DVV+W M+ Y + G V ++ ++F ++P K+VV+W +VDG ++
Sbjct: 447 LFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHA 506
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
+ M G F+++T +I G Q+HG+V +FGFD D + +S++ M
Sbjct: 507 LEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEM 566
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMI 272
Y + G MD+A+ + RD V + L
Sbjct: 567 YCKCGRMDKASIIL-----RD-VPLDVL-------------------------------- 588
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
KGN S + P+ V+W +++SG+V N +YE+ + F M+R+ V +
Sbjct: 589 ----RKGNARVSYK----EPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIR 640
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T+++++SA A L G +HA+V K+ D + +SL+ +YSK G++ DA+ +F
Sbjct: 641 TVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQS 700
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+E NIV + SMISG+A +G G A+ LF +M ++G++PN++TFL VL+AC+H GL+EEG
Sbjct: 701 NEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGC 760
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
YF+ MK Y I PG EH MVD+ GRAG L + + I VW + L + R
Sbjct: 761 RYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRL 820
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H N+++ K ++ L+++ P YV+LS++ + + + RVR + ++K PG S
Sbjct: 821 HKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQS 880
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
WI LKD++H F+ G +S EI L + KE +
Sbjct: 881 WIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGY 920
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 166/411 (40%), Gaps = 90/411 (21%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H L + G + N ++T+Y + M A K+F + +R+ +W LISG+ G
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 250 IEEAYRLFERMPGK---------------------------------------DFVSWTT 270
E + LF M K D V +
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP- 329
++ + E + LF +M E D V+W +I ++ E++ F + KDV
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490
Query: 330 ------------------------------NQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+ +T S L +++ + + G Q+H V+K
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLK 550
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI----------------DERNIVSYNSM 403
+SD I++SLV +Y KCG + A I ++ + IVS+ SM
Sbjct: 551 FGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSM 610
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLY 462
+SG+ NG E+ L FR M E +V + T +++SAC + G++E G ++ K +
Sbjct: 611 VSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGH 670
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
I+ + ++D+ ++GSL +A ++ + EP +W +++ H
Sbjct: 671 RIDAYVG--SSLIDMYSKSGSLDDAW-MVFRQSNEPNIVMWTSMISGYALH 718
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 309/598 (51%), Gaps = 48/598 (8%)
Query: 34 PMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALISGYLKVGR 86
P+R+ VS+ A++ + R G + + ++ + + +V + G K G+
Sbjct: 223 PVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQ 282
Query: 87 CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKV 146
I + E D V +++ Y K +A E+F ++ E +VV + M+ + +
Sbjct: 283 AVHGLVIKRGL-ETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRH 341
Query: 147 DCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
D + FD+F+ M G+ N T L R +H + + GF +
Sbjct: 342 DMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVC 401
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF- 265
++I+ MY + G + +A F +M D SWN+L+SG+ E R+F+ + +
Sbjct: 402 DAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVL 461
Query: 266 ------------------------VSWTTMITGFSSKGNLEKSIE--------------L 287
V + +GF ++ K + +
Sbjct: 462 ANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLV 521
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F+ + E+D +WT ++S + ++ E+A F MLR++ RPN TL++ LS + A L
Sbjct: 522 FDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACL 581
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
G Q+H++ +K S V + ++LV +Y KCGN+ DA +F D ++V +N++I G+
Sbjct: 582 GSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGY 640
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
AQ+G G +AL F++M DEG VP++ITF+ VLSAC+H GL++EG YFK + ++Y I P
Sbjct: 641 AQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPT 700
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
EHYACMVDIL +AG LAEA LIN M P +W +LGA R H N+++A+ AA+ L
Sbjct: 701 LEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLF 760
Query: 528 ELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
E +PD + ++LS++Y+ + + D ++R + ++K PGCSWI + K+H+FL+
Sbjct: 761 ESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFLS 818
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 174/392 (44%), Gaps = 39/392 (9%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
AR+ + D S+++ YCK GR+ +AR +FD MP ++VVAWTAMV
Sbjct: 84 ARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAG 143
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
LF M G+ N L +AC QVH + +D + +S++
Sbjct: 144 AALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLV 203
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--PGKDFVSW 268
Y G +D A + R VSWN+L++ Y +G+ + +F+++ G + +
Sbjct: 204 EAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKY 263
Query: 269 T-------TMITGFSSKG------------------------------NLEKSIELFNMM 291
T M G + G + E + E+F +
Sbjct: 264 TLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARI 323
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
E D V + +IS F ++ EAF F++M V+PNQ T + ++ T +N
Sbjct: 324 DEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCR 383
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
IHAH+VK + +++V +Y K G V DA F + +I S+N+++SGF
Sbjct: 384 SIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGN 443
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
E L +F+++ EG++ N+ T++ +L C
Sbjct: 444 NCEHGLRIFKELICEGVLANKYTYVGILRCCT 475
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 229/527 (43%), Gaps = 62/527 (11%)
Query: 15 ALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS 71
+L+N C + +A +F MP R+ V++ AM++ G A L+ M +
Sbjct: 100 SLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMS---EEG 156
Query: 72 VCSNAL-ISGYLKVGRCEEAARI-FEAMVEKDVVAW---------GSMVDGYCKKGRVIE 120
V N ++ LK C + + F V V S+V+ Y G V
Sbjct: 157 VVPNGFALAAALKA--CTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDV 214
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A P ++ V+W A+++ Y + + +F + G + TL + + C
Sbjct: 215 AERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCME 274
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+ G VHGLV + G + D +L N +I MY + ++A +VF+ + + D V + +
Sbjct: 275 LGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLM 334
Query: 241 ISGYVHNGEIEEAYRLFERMP------------GKDFVSWTT-------------MITGF 275
IS + + EA+ +F +M G V+ T + +GF
Sbjct: 335 ISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGF 394
Query: 276 S--------------SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
S G ++ +I F++M D +W ++SGF + E R F E
Sbjct: 395 SRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKE 454
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
++ + V N+ T +L + L G Q+HA V+K + D + L+ +Y + G
Sbjct: 455 LICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGC 514
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+A +F + ER++ S+ ++S +A+ GE+A+ FR M E PN T + LS
Sbjct: 515 FTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSV 574
Query: 442 CNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
C+ + + G ++ ++K+ +N + +VD+ + G+LA+A
Sbjct: 575 CSDLACLGSGLQLHSYTIKSGWN---SSVVSSALVDMYVKCGNLADA 618
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 41/314 (13%)
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
+ C R G +H + R G D L +S++ MY + G + +A VF M RD
Sbjct: 67 LQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDV 126
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMP--------------------GKD---------- 264
V+W +++S G+ A RLF M G D
Sbjct: 127 VAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQ 186
Query: 265 ----------FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
+VS ++++ + S G ++ + P + DV+W A+++ + + Y +
Sbjct: 187 AVKLEGLFDPYVS-SSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAK 245
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
F +++ ++ TL +VL G +H V+K +E+D + N L+
Sbjct: 246 VMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIE 305
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSKC + DAY +F IDE ++V + MIS F ++ + EA ++F +M D G+ PNQ T
Sbjct: 306 MYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYT 365
Query: 435 FLSVLSACNHVGLV 448
F+ + + G V
Sbjct: 366 FVGLAIVASRTGDV 379
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/508 (23%), Positives = 197/508 (38%), Gaps = 93/508 (18%)
Query: 14 TALINNNC---------SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
T + NNC S +A+E+FA + + V + MI+ F R M EA ++++ M
Sbjct: 295 TDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQM 354
Query: 65 ------PARWRDSVCSNALISGYL-KVGRCEE-AARIFEAMVEKDVVAWGSMVDGYCKKG 116
P ++ + A+++ V C A I ++ + ++V Y K G
Sbjct: 355 SDMGVKPNQY--TFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTG 412
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
V +A FD M ++ +W ++ G+ + E G +F + G+ N T +
Sbjct: 413 AVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILR 472
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
C R G QVH V + GF D + ++ MY + G A VF + +RD S
Sbjct: 473 CCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFS 532
Query: 237 WNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDFVSWT- 269
W ++S Y E E+A F M G S+T
Sbjct: 533 WTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTI 592
Query: 270 -----------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
++ + GNL + LF+ D V W II G+ + +A
Sbjct: 593 KSGWNSSVVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEA 652
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F EM+ + P+++T VLSA + L++G + Y K
Sbjct: 653 FQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRR-----------------------YFK 689
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
+ V Y I ++ Y M+ A+ G EA +L +M L P+ + ++
Sbjct: 690 LLSSV--YGITPTLEH-----YACMVDILAKAGKLAEAESLINEMP---LTPDASLWKTI 739
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEP 466
L AC G +E I ++ + L+ +P
Sbjct: 740 LGACRMHGNIE---IAERAAEKLFESQP 764
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%)
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
RL P D +++ + G L + +F+ MP +D V WTA++S
Sbjct: 85 RLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGA 144
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A R F EM + V PN L++ L A + L Q+HA VK+ D + +SLV
Sbjct: 145 ALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVE 204
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
Y CG V A R + R+ VS+N++++ +A++G + + +F K+ + G ++ T
Sbjct: 205 AYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYT 264
Query: 435 FLSVLSACNHVGLVEEG 451
+VL C +GL + G
Sbjct: 265 LPTVLKCCMELGLAKSG 281
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 134/314 (42%), Gaps = 26/314 (8%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
RT +A++ + ++ +A F M + S+ +++GF ++
Sbjct: 396 RTKGVCDAIVGMYVKTG-AVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIF-- 452
Query: 64 MPARWRDSVCSNALISGYLKVG-------------RCEEAARIFEAMVEKDVVAWGSMVD 110
++ +C L + Y VG C+ A + ++ + D ++D
Sbjct: 453 -----KELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLD 507
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
Y + G AR +FD++ E++V +WT ++ Y K D E + F SM R N T
Sbjct: 508 MYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDAT 567
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
L C G+Q+H + G++ ++ ++++ MY + G + +A +F
Sbjct: 568 LATSLSVCSDLACLGSGLQLHSYTIKSGWNSSVV-SSALVDMYVKCGNLADAEMLFDESD 626
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIE 286
D V WN++I GY +G +A F+ M + D +++ +++ S G L++
Sbjct: 627 THDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRR 686
Query: 287 LFNMMPEKDDVTWT 300
F ++ +T T
Sbjct: 687 YFKLLSSVYGITPT 700
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Query: 324 RKDVRPNQL-TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
R +R +L + ++ L AA+ L +G +HA +++ D + +SL+++Y KCG +
Sbjct: 52 RLRLRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRL 111
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
DA +F + R++V++ +M+S G AL LF +M +EG+VPN + L AC
Sbjct: 112 ADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKAC 171
Query: 443 N 443
Sbjct: 172 T 172
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 279/514 (54%), Gaps = 41/514 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV +V+ Y V EA ++F++M E++VV+WT+M+ + ++ + M+
Sbjct: 155 DVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQ 214
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G+ N +T+ L ACG+ EG V+ V +FG + D+ + N++I+MY + G +
Sbjct: 215 AEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLS 274
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFS 276
+A + F M R SWN+LI G+V N E +EA R+FE M D ++ ++++ +
Sbjct: 275 DALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACA 334
Query: 277 SKGNLEKSIEL-----------------------------------FNMMPEKDDVTWTA 301
G L K + + F M +KD V+WT
Sbjct: 335 QLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTV 394
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
++ G+V Q+ AF F EM +V +++ L S+LSA + L++G +IH+++ +MN
Sbjct: 395 MVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMN 454
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ D+ ++++LV +Y+KCG + A IF + + +S+N+MI G A NG G+EA+ LF
Sbjct: 455 VAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFD 514
Query: 422 KMKD-EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M + + P+ IT +VL AC HVG+V+EG YF M +L + P EHY C+VD+LGR
Sbjct: 515 QMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSL-GVVPDTEHYGCIVDLLGR 573
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA I M EP P +WG+LL A R H +DL K+ QH++ + P+ +V++
Sbjct: 574 AGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLV 633
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
S+L++ + D VR + I K+PG S +
Sbjct: 634 SNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSV 667
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 211/434 (48%), Gaps = 50/434 (11%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD M + N W M+ GY + D +F MRR G++ ++ T+ + A
Sbjct: 71 ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAA 130
Query: 181 F--FRYRE-GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
F ++R G +H LV R GF D+ + + ++ YG + EA+KVF M +RD VSW
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSW 190
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVS----------------------WT------ 269
S+IS G ++ ++ M + + W
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 270 -----------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+I+ ++ G L ++E F MP + +W +I GFV N +++EA R
Sbjct: 251 FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRI 310
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F EML V P+ +TL SVLSA A L +G +H+++ + D + NSL+++Y+K
Sbjct: 311 FEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG++ A R+F + ++++VS+ M+ G+ + A NLF +MK +V +++ +S+
Sbjct: 371 CGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSL 430
Query: 439 LSACNHVGLVEEG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
LSAC+ +G +++G Y + M N+ + +VD+ + G + A ++ M
Sbjct: 431 LSACSQLGALDKGREIHSYIEEM----NVAKDLCLESALVDMYAKCGCIDTASEIFRKMQ 486
Query: 496 FEPPPGVWGALLGA 509
+ W A++G
Sbjct: 487 HKQTLS-WNAMIGG 499
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 202/467 (43%), Gaps = 80/467 (17%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALIS 79
S+ EA ++F M R+ VS+ +MI+ + G + + ++ M A + V +L+S
Sbjct: 171 SVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLS 230
Query: 80 GYLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+ +E ++ + +E DV +++ Y K G + +A E F MP + +
Sbjct: 231 ACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKS 290
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W ++DG+++ ++ +F M G+ + ITL + AC + R+G+ VH +
Sbjct: 291 WNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIK 350
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
G D IL NS+I MY + G M A +VF M+K+D VSW ++ GYV + A+
Sbjct: 351 DNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFN 410
Query: 256 LFERMP---------------------------------------GKDFVSWTTMITGFS 276
LFE M KD + ++ ++
Sbjct: 411 LFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYA 470
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLS 335
G ++ + E+F M K ++W A+I G +N +EA F +ML +D +P+ +TL
Sbjct: 471 KCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLK 530
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VL A A +++G + L S G V D
Sbjct: 531 AVLGACAHVGMVDEGLR-------------------YFYLMSSLGVVPDTEH-------- 563
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
Y ++ + G+ +EA + +KM E PN + + S+L+AC
Sbjct: 564 ----YGCIVDLLGRAGMLDEAFHFIKKMPIE---PNPVIWGSLLAAC 603
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 54/356 (15%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGF---MDEANKVFSMMSKRDAVSWNSLISGYV 245
++HG + R D + +I + M A KVF M++ +A WN +I GY
Sbjct: 35 ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYS 94
Query: 246 HNGEIEEAYRLFERMPGK----------------------------DFVSWTTMITGFSS 277
+A +F M + D + GF+S
Sbjct: 95 SCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTS 154
Query: 278 K--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+++++ ++F M E+D V+WT++IS +++ + EM
Sbjct: 155 DVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQ 214
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ + PN++T+ S+LSA T +++G ++ V K +E+DV I+N+L+S+Y+KCG +
Sbjct: 215 AEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLS 274
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
DA F + R S+N++I GF QN +EAL +F +M G+ P+ IT +SVLSAC
Sbjct: 275 DALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACA 334
Query: 444 HVGLVEEGFIYFKSMK----TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+G + +G +K NI ++++ + G +A A + +MT
Sbjct: 335 QLGELRKGMHVHSYIKDNGICCDNILTNS-----LINMYAKCGDMAAAERVFQTMT 385
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/435 (38%), Positives = 240/435 (55%), Gaps = 38/435 (8%)
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM---- 260
L N +I MY + G + +A VF M R+ VSW ++IS Y ++A M
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 261 --PG------------------------------KDFVSWTTMITGFSSKGNLEKSIELF 288
P D + +I +S G LE ++ +F
Sbjct: 62 VRPNMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVF 121
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ M D V W++II+GF N +EA R F M R Q TL+SVL A A L
Sbjct: 122 DEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLE 181
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G Q+H HV+K + D+ + N+L+ +Y KCG++ DA +F + E++++S+++MI+G A
Sbjct: 182 LGRQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLA 239
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
QNG +EAL LF MK G+ PN +T + VL AC+H GLVEEG YF SMK L+ I+PG
Sbjct: 240 QNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGR 299
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
EHY CM+D+LGRAG L+EA+DLIN M EP W ALL A R H N+D+A AA+ ++
Sbjct: 300 EHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILR 359
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
L+P A YV+LS++Y+ + D VR + I+K PGCSWI + ++H F+ G +
Sbjct: 360 LDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDR 419
Query: 589 SCLDLKEIEVTLQTI 603
S ++EI + L +
Sbjct: 420 SHPQIREINIQLNQL 434
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 172/372 (46%), Gaps = 73/372 (19%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+++ Y K G + +A+++FDKMP++NVV+WT M+ Y + + + M R G+ N
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + + AC F R Q+H + + G D D+ + +++I +Y R G ++ A +VF
Sbjct: 66 MFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG------------- 274
M D V W+S+I+G+ N + +EA RLF+RM F++ T +T
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLEL 182
Query: 275 ------------------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+ G+LE + +F M EKD ++W+ +I+G N
Sbjct: 183 GRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNG 242
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+EA + F M ++PN +T+ VL A + HA +V E + +
Sbjct: 243 YSKEALKLFESMKVLGIKPNYVTIVGVLFACS-----------HAGLV----EEGLYYFH 287
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
S+ L+ +D R Y MI + G EA++L +M+ E P
Sbjct: 288 SMKELFG-----IDPGR----------EHYGCMIDLLGRAGRLSEAVDLINEMECE---P 329
Query: 431 NQITFLSVLSAC 442
+ +T+ ++L+AC
Sbjct: 330 DAVTWRALLNAC 341
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 159/355 (44%), Gaps = 60/355 (16%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+++A ++F MP RN VS+ MI+ + + +A E V M R+ V N Y
Sbjct: 16 LHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLM---LREGVRPNMFT--YS 70
Query: 83 KVGRCEEA--------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
V R + I + ++ DV +++D Y + G + A +FD+M ++V
Sbjct: 71 SVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLV 130
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W++++ G+ + ++ LF M+R G TLT + AC G QVH V
Sbjct: 131 VWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVH--V 188
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+D D+IL N+++ MY + G +++AN VF M ++D +SW+++I+G NG +EA
Sbjct: 189 HVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEAL 248
Query: 255 RLFERM------------------------------------------PGKDFVSWTTMI 272
+LFE M PG++ + MI
Sbjct: 249 KLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGRE--HYGCMI 306
Query: 273 TGFSSKGNLEKSIELFNMMP-EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
G L ++++L N M E D VTW A+++ + + A ++LR D
Sbjct: 307 DLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLD 361
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 15 ALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--R 69
AL++ C S+ +A +F M ++ +S++ MI G + G EA +L+ +M
Sbjct: 202 ALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKP 261
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIEAREI 124
+ V ++ G EE F +M ++ +G M+D + GR+ EA ++
Sbjct: 262 NYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDL 321
Query: 125 FDKMP-EKNVVAWTAMVDG 142
++M E + V W A+++
Sbjct: 322 INEMECEPDAVTWRALLNA 340
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 269/481 (55%), Gaps = 45/481 (9%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C R E HG + R + D+ L N +I Y + GF++ A +VF M +R
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDF---------------------------- 265
VSWN++I Y N EA +F M + F
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 266 -----------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
T ++ ++ G ++ ++++F M +K VTW+++++G+V N+ YEE
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A + R + NQ TLSSV+ A + A L +G Q+HA + K S+V + +S V
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 298
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+KCG++ ++Y IF+ + E+N+ +N++ISGFA++ +E + LF KM+ +G+ PN++T
Sbjct: 299 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 358
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F S+LS C H GLVEEG +FK M+T Y + P HY+CMVDILGRAG L+EA +LI S+
Sbjct: 359 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 418
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
F+P +WG+LL + R + NL+LA++AA+ L ELEP++A +V+LS++Y+ +
Sbjct: 419 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA---NKQWE 475
Query: 555 RVRMKKKLKR---IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD 611
+ +KL R ++K G SWI +KDKVH F G ++EI TL + ++F
Sbjct: 476 EIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 535
Query: 612 W 612
+
Sbjct: 536 Y 536
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 179/386 (46%), Gaps = 51/386 (13%)
Query: 55 YEAEELYVNMPARWRDSVCSNALISGYLKV----GRCEEA----ARIFEAMVEKDVVAWG 106
Y+ EE+ P R+ + + L+ L++ G EA +I +E DV
Sbjct: 36 YDQEEV---SPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLN 92
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ Y K G V AR++FD M E+++V+W M+ Y + + D+FL MR G F
Sbjct: 93 VLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKF 152
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T++ + ACG E ++H L + D ++ +G +++ +Y + G + +A +VF
Sbjct: 153 SEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVF 212
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEA---YRLFERMP---------------------- 261
M + +V+W+S+++GYV N EEA YR +RM
Sbjct: 213 ESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALI 272
Query: 262 --------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
G + ++ + ++ G+L +S +F+ + EK+ W IISGF
Sbjct: 273 EGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFA 332
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV-VKMNMESDV 366
+ + +E F +M + + PN++T SS+LS T + +G + + + +V
Sbjct: 333 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 392
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNI 392
+ +V + + G + +AY + +I
Sbjct: 393 VHYSCMVDILGRAGLLSEAYELIKSI 418
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 149/296 (50%), Gaps = 17/296 (5%)
Query: 11 AMITALIN--NNCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
++ LIN + C E A ++F M R+ VS+ MI + R M EA ++++ M R
Sbjct: 89 TLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEM--R 146
Query: 68 WRDSVCSNALISGYLKVG--RCE--EAARIF----EAMVEKDVVAWGSMVDGYCKKGRVI 119
S IS L C+ E ++ + ++ ++ +++D Y K G +
Sbjct: 147 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 206
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+A ++F+ M +K+ V W++MV GY++ +E+ L+ +R + N TL+ + AC
Sbjct: 207 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 266
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
EG Q+H ++ + GF ++ + +S + MY + G + E+ +FS + +++ WN+
Sbjct: 267 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 326
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
+ISG+ + +E LFE+M V+++++++ G +E+ F +M
Sbjct: 327 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 382
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 122/230 (53%), Gaps = 13/230 (5%)
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N+ + +L A + + H ++++++E DV++ N L++ YSKCG V A ++F
Sbjct: 52 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 111
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-HVGLV 448
+ ER++VS+N+MI + +N + EAL++F +M++EG ++ T SVLSAC + +
Sbjct: 112 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 171
Query: 449 EEGFIYFKSMKTL--YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
E ++ S+KT N+ G ++D+ + G + +A+ + SM + W ++
Sbjct: 172 ECKKLHCLSVKTCIDLNLYVG----TALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSM 226
Query: 507 LGAGRTHLNLDLAKLAAQ--HLMELEPDSATPYVVL---SDLYSVIGKKR 551
+ + N + A L + M LE + T V+ S+L ++I K+
Sbjct: 227 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ 276
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 203/653 (31%), Positives = 327/653 (50%), Gaps = 65/653 (9%)
Query: 9 YNAMITALINNNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
+N ++TA ++ + A +F +P R+ VS+ A++ G EA L M A+
Sbjct: 28 WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQ 87
Query: 68 WRDSVCSNALISGYL----KVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRV 118
+ SN G V R +++ K +V A +++D Y K GRV
Sbjct: 88 ---GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRV 144
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF--- 175
+AR++FD MPE+N V+W A++ GY + +LFL M R G+ + T L
Sbjct: 145 RDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAV 204
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDA 234
E F + Q+HG + ++G + + N+ IT Y + G + ++ ++F + RD
Sbjct: 205 EGPSCFLMH----QLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDL 260
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGK-----DFVSWTTMITGFSSKGN--------- 280
+SWN+++ Y HNG +EA + F RM + D S+T++I+ S G+
Sbjct: 261 ISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIH 320
Query: 281 ------------------------------LEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
+E + + FN + KD V+W ++++G+ +
Sbjct: 321 GLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHG 380
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+A ++F M ++VR ++ S+ L +S+ A L G QIH V+ S+ + +
Sbjct: 381 LSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSS 440
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SL+ +YSK G + DA + F D+ + V +N+MI G+AQ+G E LF +M
Sbjct: 441 SLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPL 500
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+ ITF+ ++++C+H GLV+EG +M+T Y + EHYAC VD+ GRAG L +A L
Sbjct: 501 DHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKL 560
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
I+SM FEP VW LLGA R H N++LA A HL EP + YV+LS +YS +G
Sbjct: 561 IDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMW 620
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
D V+ K + + K PG S I +K++VH F A KS + EI L+ +
Sbjct: 621 SDRATVQRVMKKRGLSKVPGWSLIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 202/411 (49%), Gaps = 49/411 (11%)
Query: 90 AARIFEAMVEKDVVA---WGSMVDGYCKKGR--VIEAREIFDKMPEKNVVAWTAMVDGYM 144
AAR ++++ A W ++ Y + + AR +FD++P ++ V+W A++ +
Sbjct: 10 AARSHASLLKSGFAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHA 69
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
+ + L +M G+A N+ L + R G Q+ L + G ++
Sbjct: 70 ASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVF 129
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
++++ +Y + G + +A +VF M +R+ VSWN+LI+GY +G++ A LF M +
Sbjct: 130 AASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREG 189
Query: 265 FVS--------------------------------------WTTMITGFSSKGNLEKSIE 286
V IT +S G+L+ S
Sbjct: 190 LVPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRR 249
Query: 287 LFNMMPE-KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVLSA-SAA 343
+F+ + + +D ++W A++ + +N +EA ++F+ M+++ V P+ + +S++S+ S
Sbjct: 250 IFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEH 309
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN---VVDAYRIFTNIDERNIVSY 400
+QG IH V+K +E + N+L+++Y++ + DAY+ F ++ ++ VS+
Sbjct: 310 GHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSW 369
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
NSM++G++Q+GL +AL FR M E + ++ F + L + + + +++ G
Sbjct: 370 NSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLG 420
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 283/529 (53%), Gaps = 36/529 (6%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A++ + + +D ++ Y + A +F+++P+ NV + ++ Y
Sbjct: 43 AQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNES 102
Query: 151 D---GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ-VHGLVSRFGFDYDIILG 206
+ F + L M G+ ++ T L + C + V+ VH V + GF +DI +
Sbjct: 103 NSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVP 162
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG------------------ 248
NS+I Y R G ++ A KVFS M +RD VSWNS++ G V NG
Sbjct: 163 NSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRV 222
Query: 249 -------------EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
E+++A++LFERM +D VSW+TM+ G+S G+++ + LF+ P K+
Sbjct: 223 SWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKN 282
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V WT IISG+ Q +EA EM + +R + S+L+A A + L G ++H
Sbjct: 283 LVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHD 342
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGE 414
++ + NS + +Y+KCG V DA+R+F + E+++VS+NSMI GF +G GE
Sbjct: 343 SFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGE 402
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACM 474
+++ LF M EG P++ TF+ +L AC H GLV EG YF SM+ +Y I P EHY CM
Sbjct: 403 KSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCM 462
Query: 475 VDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSA 534
VD+LGR G L EA L+ SM FEP + G LLGA R H ++ LA +++L +L P
Sbjct: 463 VDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPSDP 522
Query: 535 TPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+ +LS++Y+ G + +VR + + +K G S I ++++VH F
Sbjct: 523 GNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEF 571
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 187/381 (49%), Gaps = 20/381 (5%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F+ M R+ VS+ +M+ G V+ G A +++ MP R D V N ++ G+ K G
Sbjct: 178 AMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPER--DRVSWNTMLDGFTKAG 235
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
++A ++FE M E+D+V+W +MV GY K G + AR +FD+ P KN+V WT ++ GY +
Sbjct: 236 EMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAE 295
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
++ +L M + G+ + + AC G ++H R F +
Sbjct: 296 KGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKV 355
Query: 206 GNSIITMYGRLGFMDEANKVFS-MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
NS I MY + G +D+A +VF+ M +++D VSWNS+I G+ +G E++ LF M +
Sbjct: 356 LNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREG 415
Query: 265 FVSWTTMITGF-----------SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
F G +G ++ ++P+ + + ++ +
Sbjct: 416 FKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEH--YGCMVDLLGRGGHLK 473
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
EAF W + + PN + L ++L A + + + ++ K+ + SD + L
Sbjct: 474 EAF-WLVRSM--PFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKL-VPSDPGNFSLLS 529
Query: 374 SLYSKCGNVVDAYRIFTNIDE 394
++Y++ G+ ++ ++ +++
Sbjct: 530 NIYAQSGDWINVAKVRKQMND 550
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 185/472 (39%), Gaps = 109/472 (23%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D N+LI Y + G E A ++F M E+DVV+W SMV G K G + A ++FD+MP
Sbjct: 158 DIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMP 217
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSM----------------RRGGMAF------- 166
E++ V+W M+DG+ K + F LF M + G M
Sbjct: 218 ERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDR 277
Query: 167 ----NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
N + T + + +E + + + + G D SI+ G +
Sbjct: 278 CPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLG 337
Query: 223 NKVF-SMMSKRDAVS---WNSLISGYVHNGEIEEAYRLFERMPG-KDFVSWTTMITGFSS 277
K+ S + R S NS I Y G +++A+R+F M KD VSW +MI GF
Sbjct: 338 KKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGI 397
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
G+ EKSIELFN M+R+ +P++ T +
Sbjct: 398 HGHGEKSIELFN-------------------------------TMVREGFKPDRYTFIGL 426
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L A +N+G G R++ + + I
Sbjct: 427 LCACTHAGLVNEGR----------------------------GYFYSMQRVYGIVPQ--I 456
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC---NHVGLVEEGFIY 454
Y M+ + G +EA L R M E PN I ++L AC N V L
Sbjct: 457 EHYGCMVDLLGRGGHLKEAFWLVRSMPFE---PNAIILGTLLGACRMHNDVKLATS---- 509
Query: 455 FKSMKTLYNIEPG-PEHYACMVDILGRAG---SLAEAIDLINSMTFEPPPGV 502
K L+ + P P +++ + +I ++G ++A+ +N + P GV
Sbjct: 510 --VSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGV 559
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 155/371 (41%), Gaps = 58/371 (15%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + + D + +I Y + A VF+ + + +N LI Y +G
Sbjct: 40 QIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSG 99
Query: 249 EIEEAYRLF--------ERMPGKDFV------------SW-------------------- 268
+ F + + +F SW
Sbjct: 100 NESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDI 159
Query: 269 ---TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
++I + G++E ++++F+ M E+D V+W +++ G V N + A + F EM +
Sbjct: 160 FVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPER 219
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
D +++ +++L +++ ++ + E D+ +++V YSK G++ A
Sbjct: 220 D----RVSWNTMLDGFTKAGEMDKAFKLFERMA----ERDIVSWSTMVCGYSKNGDMDMA 271
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+F +N+V + ++ISG+A+ G +EA+NL +M+ GL + F+S+L+AC
Sbjct: 272 RMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAES 331
Query: 446 GLVEEGFIYFKSMKTLY---NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
G++ G K M + + +D+ + G + +A + N M E
Sbjct: 332 GMLGLG----KKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVS 387
Query: 503 WGALLGAGRTH 513
W +++ H
Sbjct: 388 WNSMIHGFGIH 398
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 274/509 (53%), Gaps = 47/509 (9%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFED--GFDLFLSMRRGGMAFNSITLTILFEAC 178
AR + ++ ++ W ++V + F + MRR G+ + T L +A
Sbjct: 55 ARRLLCQIQTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKA- 113
Query: 179 GRFFRYREG--VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
F+ R+ Q H + +FGFD D+ + NS+I+ Y G + ++VF +D VS
Sbjct: 114 --VFKLRDANPFQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVS 171
Query: 237 WNSLISGYVHNGEIEEAYRLFERM------------------------------------ 260
W ++I G+V N EA F M
Sbjct: 172 WTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYL 231
Query: 261 -PGK---DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAF 316
G+ D ++++ + G + + ++F+ MP ++ VTWTA+I+G+V +E+
Sbjct: 232 EAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGM 291
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
F EML+ DV PN+ TLSSVLSA A L++G ++H +V+K ++E + ++ +L+ Y
Sbjct: 292 FVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFY 351
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+KCG + +A +F + E+N+ ++ +MI+GFA +G A++LF M + PN++TF+
Sbjct: 352 AKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFI 411
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
VLSAC H GLVEEG F SMK +N+EP +HYACMVD+ GR G L EA LI M
Sbjct: 412 VVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPM 471
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
EP VWGAL G+ H + +L K AA +++L+P + Y +L++LYS D RV
Sbjct: 472 EPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARV 531
Query: 557 RMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
R + K +++ KSPGCSWI +K K+H F+A
Sbjct: 532 RKQMKDQQVVKSPGCSWIEVKGKLHEFIA 560
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 156/336 (46%), Gaps = 41/336 (12%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A I + + D+ S++ GY G +FD +K+VV+WTAM+DG+++ D
Sbjct: 127 AHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSL 186
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILGNSI 209
+ F+ M+R G+A N +T+ + +A + R G +HG G D+ +G+S+
Sbjct: 187 EAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSL 246
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS-- 267
+ MYG+ G D+A KVF M R+ V+W +LI+GYV E+ +FE M D
Sbjct: 247 VDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNE 306
Query: 268 -------------------------------------WTTMITGFSSKGNLEKSIELFNM 290
TT+I ++ G LE++I +F
Sbjct: 307 KTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFER 366
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+ EK+ TWTA+I+GF + A F ML V PN++T VLSA A + +G
Sbjct: 367 LREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEG 426
Query: 351 SQIHAHVV-KMNMESDVSIQNSLVSLYSKCGNVVDA 385
++ + + N+E +V L+ + G + +A
Sbjct: 427 RRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEA 462
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 189/411 (45%), Gaps = 33/411 (8%)
Query: 10 NAMITALINNNCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
N++I+ +NC ++E +F ++ VS+ AMI GFVR EA +V M
Sbjct: 142 NSLISGY--SNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMK--- 196
Query: 69 RDSVCSNAL-ISGYLKVGRCEEAARIFEAM---------VEKDVVAWGSMVDGYCKKGRV 118
R V +N + + LK R E R ++ V DV S+VD Y K G
Sbjct: 197 RSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCY 256
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+A+++FD+MP +NVV WTA++ GY++ CFE G +F M + +A N TL+ + AC
Sbjct: 257 DDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSAC 316
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G +VH V + + + +G ++I Y + G ++EA VF + +++ +W
Sbjct: 317 AHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWT 376
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIEL------- 287
++I+G+ +G A LF M V++ +++ + G +E+ L
Sbjct: 377 AMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKER 436
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
FN+ P+ D + ++ F EEA + IE R + P ++ +
Sbjct: 437 FNLEPKADH--YACMVDLFGRKGLLEEA-KALIE--RMPMEPTNAVWGALFGSCLIHKDY 491
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
G + V+K+ S L +LYS+ N D R+ + ++ +V
Sbjct: 492 ELGKYAASRVIKLQ-PSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVV 541
>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
Length = 711
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 204/647 (31%), Positives = 326/647 (50%), Gaps = 69/647 (10%)
Query: 2 ADRTSASYNAMITALINNNCSIYEA-FEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
D T +++IT + + CS E+ + +F TMP +N VS+ AMI+GF L
Sbjct: 44 CDSTVFIGSSLIT--LYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHL 101
Query: 61 YVNM---PARWRD-------SVCSNALISGYLKVGRCEEAARI---FEAMVEKDVVAWGS 107
+ +M + D SVC+ L +GR A ++ F + V +
Sbjct: 102 FASMMLSSCKPNDITFATLFSVCTK---HALLALGRSVHALQMRMGFHSYVHVS----NA 154
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y K G + EA+ IF + K++V+W A++ G + + DL M R + +
Sbjct: 155 LLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVLAKHCLDLLKEMERQHIVPD 214
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+++ + +C EG + G + + ++ + GR G ++EA +
Sbjct: 215 ALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQ 274
Query: 228 MMS-KRDAVSWNSLI-SGYVHNG---EIEEAYRLFERMPGKDFVSW-------------- 268
MS +AV W SL+ S VH I+ A + PGK S
Sbjct: 275 TMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMSSCAD 334
Query: 269 --------------------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
+++IT +S LE S +F MP K+ V+WTA+
Sbjct: 335 RQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAM 394
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
ISGF + + E F M +PN +T +++ S A L G +HA ++M
Sbjct: 395 ISGFALHNRVEPCLHLFASMRLSSCKPNDITFATLFSVCTNHALLALGKSVHALQMRMGF 454
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRK 422
S V + N+L+S+Y+KCG + +A IF I +++VS+N+MI G +Q GL + L+L ++
Sbjct: 455 HSYVHVSNALLSMYAKCGCIDEAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCLDLLKE 514
Query: 423 MKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
M+ + +VP+ ++FL VLS+C H LVEEG FK+M + I+PG +HY+CMVD+LGRAG
Sbjct: 515 MERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIE-HGIKPGLDHYSCMVDLLGRAG 573
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSD 542
L EA DLI +M+ P +WG+LLG+ R H N+ + AA+H ++LEP A ++ L++
Sbjct: 574 LLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGCAATHIQLAN 633
Query: 543 LYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
LY+ IG D RVRM K + ++ + GCSWI + DKV+ F A +S
Sbjct: 634 LYATIGCWSDVARVRMAMKARGLKTNIGCSWIEVGDKVYSFTAENRS 680
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 188/335 (56%), Gaps = 3/335 (0%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+++IT +S LE S +F MP K+ V+WTA+ISGF + + E F M+ +
Sbjct: 52 SSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCK 111
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN +T +++ S A L G +HA ++M S V + N+L+S+Y+KCG + +A I
Sbjct: 112 PNDITFATLFSVCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFI 171
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F I +++VS+N++I G +Q L + L+L ++M+ + +VP+ ++FL VLS+C H LV
Sbjct: 172 FGCIACKDLVSWNAIIFGCSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLV 231
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
EEG FK+M + I+PG +HY+CMVD+LGRAG L EA DLI +M+ P +WG+LLG
Sbjct: 232 EEGRHCFKTMIE-HGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLG 290
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
+ R H N+ + AA+H ++LEP S L + + D +L +
Sbjct: 291 SCRVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVK 350
Query: 569 PGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
GC + + L R C L+ + QT+
Sbjct: 351 VGCDSTVFIGSSLITLYSR--CSQLESSYLVFQTM 383
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
Query: 320 IEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
+E+ RK + +Q L++ +S+ A QG+Q+H +VK+ +S V I +SL++LYS+
Sbjct: 1 MELHRKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSR 60
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
C + +Y +F + +N VS+ +MISGFA + E L+LF M PN ITF ++
Sbjct: 61 CSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATL 120
Query: 439 LSACNHVGLVEEG 451
S C L+ G
Sbjct: 121 FSVCTKHALLALG 133
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 139/347 (40%), Gaps = 76/347 (21%)
Query: 160 RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
R+G + + L +C + +G Q+HGL+ + G D + +G+S+IT+Y R +
Sbjct: 5 RKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQL 64
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE--------------------- 258
+ + VF M ++ VSW ++ISG+ + +E LF
Sbjct: 65 ESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVC 124
Query: 259 -----------------RMPGKDFVSWT-TMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
RM +V + +++ ++ G +E++ +F + KD V+W
Sbjct: 125 TKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWN 184
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
AII G + EM R+ + P+ L+ VLS+ + +G H K
Sbjct: 185 AIIFGCSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGR----HCFKT 240
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF 420
+E + I +D Y+ M+ + GL EEA +L
Sbjct: 241 MIE----------------------HGIKPGLDH-----YSCMVDLLGRAGLLEEAWDLI 273
Query: 421 RKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
+ M + PN + + S+L +C G + G ++ + +EPG
Sbjct: 274 QTMS---IPPNAVIWGSLLGSCRVHGNISIG---IQAAEHRLKLEPG 314
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 263/455 (57%), Gaps = 3/455 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A ++F ++P+ + W + G + L+ M + ++ T ++ +AC +
Sbjct: 60 AVQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTK 119
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
F G VHG V R GF ++++ N+++ + + G + AN +F K D V+W++L
Sbjct: 120 LFWVNTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSAL 179
Query: 241 ISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
I+GY G++ A +LF+ MP +D VSW MIT ++ G +E + LF+ P KD V+W
Sbjct: 180 IAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWN 239
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
A++ G+V + +EA F EM P+++T+ S+LSA A + G ++HA ++++
Sbjct: 240 AMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLG--DXGEKVHAKIMEL 297
Query: 361 NM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
N + + N+LV +Y+KCGN+ +F I ++++VS+NS+I G A +G EE+L L
Sbjct: 298 NKGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGL 357
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
FR+M+ + P++ITF+ VL+AC+H G V+EG YF MK Y IEP H C+VD+L
Sbjct: 358 FREMQRTKVCPDEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLA 417
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L EA D I SM EP VW +LLGA + H +++LAK A + L+ + D + YV+
Sbjct: 418 RAGLLKEAFDFIASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVL 477
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
LS++Y+ G+ VR + K+ G S++
Sbjct: 478 LSNVYASHGEWDGAENVRKLMDDNGVTKTRGSSFV 512
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 144/304 (47%), Gaps = 13/304 (4%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D V +ALI+GY + G A ++F+ M ++D+V+W M+ Y K G + AR +FD+ P
Sbjct: 172 DVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAP 231
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
K+VV+W AMV GY+ + ++ +LF M G + +T+ L AC E V
Sbjct: 232 MKDVVSWNAMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLGDXGEKVH 291
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+ G +LGN+++ MY + G + + VF ++ +D VSWNS+I G +G
Sbjct: 292 AKIMELNKG-KLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGH 350
Query: 250 IEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WT 300
EE+ LF M D +++ ++ S GN+++ F +M K +
Sbjct: 351 AEESLGLFREMQRTKVCPDEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCG 410
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
++ +EAF + M + PN + S+L A + + +++M
Sbjct: 411 CVVDMLARAGLLKEAFDFIASM---KIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRM 467
Query: 361 NMES 364
++
Sbjct: 468 RVDQ 471
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 130/576 (22%), Positives = 229/576 (39%), Gaps = 151/576 (26%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLK 83
A ++FA +P + + I G + A LY M R D+ ++ K
Sbjct: 60 AVQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTK 119
Query: 84 VGRCEEAA----RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
+ + R+F +VV +++ + K G + A +IFD + +VVAW+A+
Sbjct: 120 LFWVNTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSAL 179
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ GY + RG ++ V+R F
Sbjct: 180 IAGYAQ---------------RGDLS----------------------------VARKLF 196
Query: 200 D----YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
D D++ N +IT Y + G M+ A ++F +D VSWN+++ GYV + +EA
Sbjct: 197 DEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVGGYVLHNLNQEALE 256
Query: 256 LFERM----PGKDFVSWTTMITG----------------------------------FSS 277
LF+ M D V+ ++++ ++
Sbjct: 257 LFDEMCEVGECPDEVTMLSLLSACADLGDXGEKVHAKIMELNKGKLSTLLGNALVDMYAK 316
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
GN+ K + +F ++ +KD V+W ++I G + EE+ F EM R V P+++T V
Sbjct: 317 CGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCPDEITFVGV 376
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L+A + T +++G++ + +++K + + +I++ CG VVD
Sbjct: 377 LAACSHTGNVDEGNR-YFYLMKNKYKIEPNIRH--------CGCVVDM------------ 415
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG------ 451
A+ GL +EA + MK E PN I + S+L AC G VE
Sbjct: 416 ---------LARAGLLKEAFDFIASMKIE---PNAIVWRSLLGACKVHGDVELAKRATEQ 463
Query: 452 -----------FIYFKSMKTLYNIEPGPEHYACMVDILG----RAGSLAEAIDLINSMTF 496
++ ++ + G E+ ++D G R S EA +
Sbjct: 464 LLRMRVDQSGDYVLLSNVYASHGEWDGAENVRKLMDDNGVTKTRGSSFVEAYRI------ 517
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
EP P LLGA + +++LAK + L+ L D
Sbjct: 518 EPNPVNGRTLLGACIVYGDVELAKRVNEELLRLRRD 553
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 279/514 (54%), Gaps = 41/514 (7%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV +V+ Y V EA ++F++M E++VV+WT+M+ + ++ + M+
Sbjct: 155 DVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQ 214
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G+ N +T+ L ACG+ EG V+ V +FG + D+ + N++I+MY + G +
Sbjct: 215 AEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLS 274
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFS 276
+A + F M R SWN+LI G+V N E +EA R+FE M D ++ ++++ +
Sbjct: 275 DALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACA 334
Query: 277 SKGNLEKSIEL-----------------------------------FNMMPEKDDVTWTA 301
G L K + + F M +KD V+WT
Sbjct: 335 QLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTV 394
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
++ G+V Q+ AF F EM +V +++ L S+LSA + L++G +IH+++ +MN
Sbjct: 395 MVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMN 454
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ D+ ++++LV +Y+KCG + A IF + + +S+N+MI G A NG G+EA+ LF
Sbjct: 455 VAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFD 514
Query: 422 KMKD-EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M + + P+ IT +VL AC HVG+V+EG YF M +L + P EHY C+VD+LGR
Sbjct: 515 QMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSL-GVVPDTEHYGCIVDLLGR 573
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVL 540
AG L EA I M EP P +WG+LL A R H +DL K+ QH++ + P+ +V++
Sbjct: 574 AGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLV 633
Query: 541 SDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
S+L++ + D VR + I K+PG S +
Sbjct: 634 SNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSV 667
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 212/434 (48%), Gaps = 50/434 (11%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
AR++FD M + N W M+ GY + D +F MRR G++ ++ T+ + A
Sbjct: 71 ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAA 130
Query: 181 F--FRYRE-GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
F ++R G +H LV R GF D+ + + ++ YG ++EA+KVF M +RD VSW
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSW 190
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVS----------------------WT------ 269
S+IS G ++ ++ M + + W
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 270 -----------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+I+ ++ G L ++E F MP + +W +I GFV N +++EA R
Sbjct: 251 FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRI 310
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F EML V P+ +TL SVLSA A L +G +H+++ + D + NSL+++Y+K
Sbjct: 311 FEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG++ A R+F + ++++VS+ M+ G+ + A NLF +MK +V +++ +S+
Sbjct: 371 CGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSL 430
Query: 439 LSACNHVGLVEEG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
LSAC+ +G +++G Y + M N+ + +VD+ + G + A ++ M
Sbjct: 431 LSACSQLGALDKGREIHSYIEEM----NVAKDLCLESALVDMYAKCGCIDTASEIFRKMQ 486
Query: 496 FEPPPGVWGALLGA 509
+ W A++G
Sbjct: 487 HKQTLS-WNAMIGG 499
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 202/467 (43%), Gaps = 80/467 (17%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALIS 79
S+ EA ++F M R+ VS+ +MI+ + G + + ++ M A + V +L+S
Sbjct: 171 SVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLS 230
Query: 80 GYLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+ +E ++ + +E DV +++ Y K G + +A E F MP + +
Sbjct: 231 ACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKS 290
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W ++DG+++ ++ +F M G+ + ITL + AC + R+G+ VH +
Sbjct: 291 WNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIK 350
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
G D IL NS+I MY + G M A +VF M+K+D VSW ++ GYV + A+
Sbjct: 351 DNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFN 410
Query: 256 LFERMP---------------------------------------GKDFVSWTTMITGFS 276
LFE M KD + ++ ++
Sbjct: 411 LFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYA 470
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLS 335
G ++ + E+F M K ++W A+I G +N +EA F +ML +D +P+ +TL
Sbjct: 471 KCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLK 530
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
+VL A A +++G + L S G V D
Sbjct: 531 AVLGACAHVGMVDEGLR-------------------YFYLMSSLGVVPDTEH-------- 563
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
Y ++ + G+ +EA + +KM E PN + + S+L+AC
Sbjct: 564 ----YGCIVDLLGRAGMLDEAFHFIKKMPIE---PNPVIWGSLLAAC 603
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 164/356 (46%), Gaps = 54/356 (15%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGF---MDEANKVFSMMSKRDAVSWNSLISGYV 245
++HG + R D + +I + M A KVF M++ +A WN +I GY
Sbjct: 35 ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYS 94
Query: 246 HNGEIEEAYRLFERMPGK----------------------------DFVSWTTMITGFSS 277
+A +F M + D + GF+S
Sbjct: 95 SCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTS 154
Query: 278 K--------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
++E++ ++F M E+D V+WT++IS +++ + EM
Sbjct: 155 DVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQ 214
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ + PN++T+ S+LSA T +++G ++ V K +E+DV I+N+L+S+Y+KCG +
Sbjct: 215 AEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLS 274
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
DA F + R S+N++I GF QN +EAL +F +M G+ P+ IT +SVLSAC
Sbjct: 275 DALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACA 334
Query: 444 HVGLVEEGFIYFKSMK----TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+G + +G +K NI ++++ + G +A A + +MT
Sbjct: 335 QLGELRKGMHVHSYIKDNGICCDNILTNS-----LINMYAKCGDMAAAERVFQTMT 385
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/430 (37%), Positives = 248/430 (57%), Gaps = 1/430 (0%)
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+Q+H ++ R G D+ IL + Y LG +D + +F W ++I G+
Sbjct: 47 LQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALR 106
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
G++ A +LF+ MP K VS T M+T ++ G L+ + LF+ M E+D V W +I G+
Sbjct: 107 GDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYT 166
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EA F ML+ +PN++T+ SVLSA L G +H+++ ++ +V
Sbjct: 167 QNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVH 226
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ +LV +YSKCG++ DA +F ID++++V++NSMI G+A +G +EAL LF+ M G
Sbjct: 227 VGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG 286
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
L P ITF+ +LSAC H G V EG+ F MK Y IEP EHY CMV++LGRAG + +A
Sbjct: 287 LHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQA 346
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+L+ +M EP P +WG LLGA R H + L + + L++ ++ Y++LS++Y+ +
Sbjct: 347 YELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAV 406
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGT 607
G R+R K ++K PGCS I + +KVH FLAG + KEI + L+ I+
Sbjct: 407 GNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWL 466
Query: 608 KEFDW-PKHD 616
K + P+ D
Sbjct: 467 KSHGYTPQTD 476
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 165/354 (46%), Gaps = 21/354 (5%)
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
A+I G+ G A ++F+ M EK +V+ +M+ Y K G + AR +FD M E++ V
Sbjct: 98 AIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 157
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W M+DGY + + LF M + N +T+ + ACG+ G VH +
Sbjct: 158 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 217
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
G +++ +G +++ MY + G +++A VF + +D V+WNS+I GY +G +EA +
Sbjct: 218 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 277
Query: 256 LFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGF 306
LF+ M +++ +++ G + + ++FN M ++ + + +++
Sbjct: 278 LFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLL 337
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
E+A+ M ++ P+ + ++L A + G +I +V N+ ++
Sbjct: 338 GRAGHVEQAYELVKNM---NIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNL-ANS 393
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNI--------VSYNSMISGFAQNGL 412
L ++Y+ GN R+ T + + + + N+ + F GL
Sbjct: 394 GTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGL 447
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 153/347 (44%), Gaps = 49/347 (14%)
Query: 14 TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TA+I+ + + A ++F TMP ++ VS AM+T + + G A L+ M RD
Sbjct: 97 TAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEE--RD 154
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAM--------------------------------- 97
VC N +I GY + G EA +F M
Sbjct: 155 GVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHS 214
Query: 98 ------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
++ +V ++VD Y K G + +AR +FDK+ +K+VVAW +M+ GY ++
Sbjct: 215 YIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQE 274
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSII 210
LF SM R G+ +IT + ACG EG + + + +G + I ++
Sbjct: 275 ALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMV 334
Query: 211 TMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
+ GR G +++A ++ M+ + D V W +L+ +G+I ++ E + ++ +
Sbjct: 335 NLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSG 394
Query: 270 TMI---TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
T I +++ GN + L MM + S VNN+ +E
Sbjct: 395 TYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHE 441
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 314/627 (50%), Gaps = 82/627 (13%)
Query: 42 AAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIF------- 94
+++I + G +A+ L+ N+P + DSV N +++GY+K G A +IF
Sbjct: 97 SSLIKLYAENGHLSDAQYLFDNIPQK--DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSE 154
Query: 95 -----------------EAMV---------------EKDVVAWGSMVDGYCKKGRVIEAR 122
EAM+ E D +++ Y K + AR
Sbjct: 155 IKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAAR 214
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
++FD P+ ++V+W ++ GY++ + LF M G+ +SIT
Sbjct: 215 KLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELL 274
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+ ++HG + R D+ L +++I +Y + ++ A K+ S D V ++IS
Sbjct: 275 SLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMIS 334
Query: 243 GYVHNGEIEEAYRLF-----ERMPGKDFVSWTTMITGFSS-------------------- 277
GYV NG+ +EA F ERM V+++++ F+
Sbjct: 335 GYVLNGKNKEALEAFRWLVQERMKPTS-VTFSSIFPAFAGLAALNLGKELHGSIIKTKLD 393
Query: 278 ---------------KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
G L+ + +FN + EKD + W ++I+ N + EA F +M
Sbjct: 394 EKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQM 453
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ R + +++S LSA A L+ G +IH ++K + SD+ ++SL+ +Y+KCGN+
Sbjct: 454 GMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNL 513
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ R+F + ERN VS+NS+IS + +G +E L LF +M G+ P+ +TFL ++SAC
Sbjct: 514 NFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISAC 573
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
H G V+EG Y+ M Y I EHYAC+ D+ GRAG L EA + INSM F P GV
Sbjct: 574 GHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGV 633
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
WG LLGA H N++LA++A++HL +L+P ++ YV+L+++ + GK R +VR K
Sbjct: 634 WGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKE 693
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ +RK PG SWI + + H+F+A S
Sbjct: 694 RGVRKVPGYSWIEVNNATHMFVAADGS 720
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 154/578 (26%), Positives = 271/578 (46%), Gaps = 71/578 (12%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSN 75
S+ +A +F T+ + ++ MI GF G F A Y+ M P ++
Sbjct: 7 SLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVK 66
Query: 76 ALIS-GYLKVGR-CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
A +K+G+ E + +++DV S++ Y + G + +A+ +FD +P+K+
Sbjct: 67 ACCGLKSVKMGKIVHETVNLMG--LKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDS 124
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V W M++GY+K + +FL MR + NS+T + C G Q+HG+
Sbjct: 125 VLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGI 184
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
G + D + N+++ MY + + A K+F + D VSWN +ISGYV NG + EA
Sbjct: 185 AVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEA 244
Query: 254 YRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNM------------------- 290
LF M D +++ + + + +L+ E+
Sbjct: 245 EHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDI 304
Query: 291 --------MPEK--------DDVTWTAIISGFV---NNEQYEEAFRWFIEMLRKDVRPNQ 331
M +K D V T +ISG+V N++ EAFRW ++ + ++P
Sbjct: 305 YFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ---ERMKPTS 361
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+T SS+ A A A LN G ++H ++K ++ + ++++ +Y+KCG + A R+F
Sbjct: 362 VTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNR 421
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
I E++ + +NSMI+ +QNG EA+NLFR+M EG + ++ LSAC ++ +
Sbjct: 422 ITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALH-- 479
Query: 452 FIYFKSMKTLYNIEPGP---EHYA--CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
Y K + L + GP + YA ++D+ + G+L + + + M E W ++
Sbjct: 480 --YGKEIHGL--MIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-ERNEVSWNSI 534
Query: 507 LGAGRTHLNLDLAKLAAQHLM---ELEPDSATPYVVLS 541
+ A H +L LA H M ++PD T ++S
Sbjct: 535 ISAYGNHGDLKEC-LALFHEMLRNGIQPDHVTFLGIIS 571
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 169/369 (45%), Gaps = 39/369 (10%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y + G + +A+ +F + AW M+ G+ + F +L M G++ + T
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ +AC + G VH V+ G D+ +G+S+I +Y G + +A +F + +
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM------PGK---------------------- 263
+D+V WN +++GYV NG+ A ++F M P
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D T++ +S L+ + +LF+ P+ D V+W IISG+V N
Sbjct: 182 HGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLM 241
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA F M+ ++P+ +T +S L +L +IH ++++ + DV ++++L
Sbjct: 242 GEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSAL 301
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
+ +Y KC +V A +I + V +MISG+ NG +EAL FR + E + P
Sbjct: 302 IDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTS 361
Query: 433 ITFLSVLSA 441
+TF S+ A
Sbjct: 362 VTFSSIFPA 370
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 39/273 (14%)
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG--------- 262
MY R G + +A +F + +WN +I G+ G+ A + +M G
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 263 ------------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
+D +++I ++ G+L + LF+ +P
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+KD V W +++G+V N A + F+EM +++PN +T + VLS A+ A L+ G+Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+H V +E D + N+L+++YSKC + A ++F + ++VS+N +ISG+ QNGL
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
EA +LFR M G+ P+ ITF S L N +
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNEL 273
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 94/173 (54%)
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G+L+ + LF + W +I GF Q+ A ++++ML V P++ T V+
Sbjct: 6 GSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVV 65
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A ++ G +H V M ++ DV + +SL+ LY++ G++ DA +F NI +++ V
Sbjct: 66 KACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSV 125
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+N M++G+ +NG A+ +F +M+ + PN +TF VLS C +++ G
Sbjct: 126 LWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y + G++ DA +F + ++N MI GF G AL + KM G+ P++ T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTL 461
F V+ AC + V+ G I +++ +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLM 87
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/564 (32%), Positives = 294/564 (52%), Gaps = 42/564 (7%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++DGY K + EAR++FD+MP +++V W +M+ ++ ++ +L+ +M G+ +
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPD 100
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDY-DIILGNSIITMYGRLGFMDEANKVF 226
+ T + +F+A REG + HGL GF+ D + I+ MY + G M +A VF
Sbjct: 101 AYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVF 160
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK--------------------DFV 266
+ +D V + +LI GY +G EA +FE M G D V
Sbjct: 161 DRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLV 220
Query: 267 -------------------SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
S T+++T +S +E SI++FN + VTWT+ I G V
Sbjct: 221 NGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLV 280
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N + E A F EM+R + PN TLSS+L A ++ A L G QIHA VK+ ++ +
Sbjct: 281 QNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKF 340
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+ +L+ LY KCGNV A +F ++ E +IVS N+MI +AQNG G EAL LF ++K G
Sbjct: 341 VDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLG 400
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
L PN +TF+S+L ACN+ GLVEEG F ++ ++IE +HY CM+D+LGRA EA
Sbjct: 401 LEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEA 460
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
LI P W LL A + H +++A+ + +++ P +++L+++Y+
Sbjct: 461 TMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASA 519
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGT 607
GK + ++ + R++K+P SW+ + +VH F+AG S EI L + +
Sbjct: 520 GKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKV 579
Query: 608 KEFDW-PKHDWSLLGLERDWSYTA 630
+ P + L LE + +A
Sbjct: 580 ITLGYNPDTKFVLQDLEEEKKISA 603
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 162/331 (48%), Gaps = 41/331 (12%)
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK- 263
G+ +I Y + + EA K+F M R V+WNS+IS +V G+ +EA L+ M +
Sbjct: 37 FGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEG 96
Query: 264 ---DFVSWTTMITGFSSK------------------------------------GNLEKS 284
D +++ + FS G ++ +
Sbjct: 97 VLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDA 156
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+F+ + +KD V +TA+I G+ + EA F +M+ ++PN+ TL+SVL +
Sbjct: 157 RFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNL 216
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L G IH VVK +ES V+ Q SL+++YSKC V D+ ++F ++ + V++ S I
Sbjct: 217 GDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFI 276
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
G QNG E AL++FR+M + PN T S+L AC+ + ++E G ++ +
Sbjct: 277 VGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGE-QIHAVTVKLGV 335
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+ A ++ + G+ G++ +A + +S+T
Sbjct: 336 DGNKFVDAALIHLYGKCGNVEKARSVFDSLT 366
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 205/458 (44%), Gaps = 54/458 (11%)
Query: 21 CS-IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNAL 77
CS I EA ++F MP R+ V++ +MI+ V RG EA ELY NM D+ +A+
Sbjct: 48 CSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAI 107
Query: 78 ISGYLKVGRCEEA------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
+ ++G E A + V VA G +VD Y K G++ +AR +FD++ +K
Sbjct: 108 FKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATG-IVDMYAKFGKMKDARFVFDRVLDK 166
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+VV +TA++ GY + + ++F M + N TL + +CG G +H
Sbjct: 167 DVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIH 226
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
GLV ++G + + S++TMY + ++++ KVF+ ++ V+W S I G V NG E
Sbjct: 227 GLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREE 286
Query: 252 EAYRLFERM----------------------------------------PGKDFVSWTTM 271
A +F M G FV +
Sbjct: 287 VALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVD-AAL 345
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
I + GN+EK+ +F+ + E D V+ +I + N EA F + + + PN
Sbjct: 346 IHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNV 405
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN--SLVSLYSKCGNVVDAYRIF 389
+T S+L A + +G QI + +++ N +++ + ++ L + +A +
Sbjct: 406 VTFISILLACNNAGLVEEGCQIFS-LIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLI 464
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
+++ + ++++ +G E A +KM D+
Sbjct: 465 EEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQA 502
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
+S+++ +L +H H++K + L+ Y KC + +A ++F +
Sbjct: 5 TSLIAQCTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
R+IV++NSMIS G +EA+ L+ M EG++P+ TF ++ A + +G+ EG
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 187/606 (30%), Positives = 310/606 (51%), Gaps = 55/606 (9%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-----------PARWRD 70
S+ +A +F MP R+ V++ A+I+G V G E V M +R +
Sbjct: 160 SVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTME 219
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
S + G L VG C + +A V S+ Y K +AR +F ++PE
Sbjct: 220 SGLEACGVLGELSVGTCLHGFGV-KAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPE 278
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K++V+WT+++ Y + E +LFL M G+ + + ++ L G + R G
Sbjct: 279 KDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTF 338
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG-- 248
H + R F +++GN++I+MY + +D A VF M+ +RD SW+S++ Y G
Sbjct: 339 HAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLD 398
Query: 249 -EIEEAYRLFE---------------------------------------RMPGKDFVSW 268
+ E YR + + G++
Sbjct: 399 LKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVA 458
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+I+ + GN + + ++F M+ KD VTW+A+IS + + ++A + +ML + V+
Sbjct: 459 NALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVK 518
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN TL SV+S+ A A L G IH+HV + +E D+SI +LV +Y KCG + A ++
Sbjct: 519 PNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKM 578
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F ++ ER++V++N MISG+ +G +AL LF M+ + PN +TFL++LSAC H GLV
Sbjct: 579 FDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLV 638
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
++G F M+ Y++EP +HYACMVD+LG++G L EA D++++M EP G+WG LLG
Sbjct: 639 DKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLG 697
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A + H N ++ A+ +P++ Y+++S+ Y K + ++R K + KS
Sbjct: 698 ACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKS 757
Query: 569 PGCSWI 574
G S I
Sbjct: 758 IGWSTI 763
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/529 (24%), Positives = 244/529 (46%), Gaps = 55/529 (10%)
Query: 65 PARWRDSVCSNALIS-GYLKVGRCEEAARIFEAMVEKD--VVAWGSMVDGYCKKGRVIEA 121
P+R+ + ++A G L VG A + ++E D V S+V Y + G V +A
Sbjct: 105 PSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDA 164
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR----GGMAFNSITLTILFEA 177
+FD+MPE++VVAWTA++ G + +G + M R GG NS T+ EA
Sbjct: 165 VRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEA 224
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
CG G +HG + G + + +S+ +MY + ++A +F + ++D VSW
Sbjct: 225 CGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSW 284
Query: 238 NSLISGYVHNGEIEEAYRLFERMP--------------------------GKDF------ 265
SLI Y G E+A LF M GK F
Sbjct: 285 TSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVR 344
Query: 266 -------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+ +I+ ++ ++ + +F M+ ++D +W++++ + +
Sbjct: 345 RNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLEL 404
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQ---GSQIHAHVVKMNMESDVSIQNSLVSL 375
+ EM +D + +S++S ++ + L + G H + +K + S+ N+L+S+
Sbjct: 405 YREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISM 464
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y +CGN A +IF + +++V+++++IS ++ G ++AL L+ +M EG+ PN T
Sbjct: 465 YGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATL 524
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+SV+S+C ++ +E G + +K + +E +VD+ + G L A + +SM
Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDV-GLECDLSICTALVDMYMKCGQLGIARKMFDSM- 582
Query: 496 FEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME---LEPDSATPYVVLS 541
E W ++ H + L +ME ++P+S T +LS
Sbjct: 583 LERDVVTWNVMISGYGMH-GEAIQALKLFSMMERGNVKPNSLTFLAILS 630
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 148/342 (43%), Gaps = 46/342 (13%)
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P + W +++ + F MR G + T ++ A G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 189 QVHGLVSRFGF---DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
VH RFG D + + +S++ MY R G + +A ++F M +RD V+W ++ISG V
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 246 HNGEIEEAYRLFERM----------PGKDF-------------VSWTTMITGFSSKGNL- 281
NG+ E RM P +S T + GF K +
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVG 247
Query: 282 -------------------EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
E + LF +PEKD V+WT++I + E+A F+ M
Sbjct: 248 HCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM 307
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
++P+++ +S +L+ A + G HA +V+ N V I N+L+S+Y+KC V
Sbjct: 308 EESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQV 367
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
A +F + +R+ S++SM+ + + GL + L L+R+M+
Sbjct: 368 DIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQ 409
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
P DF + +++ +SS G + F P D W +++ +
Sbjct: 39 PRPDFAA--KLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASDFASTLSAHR 96
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM---ESDVSIQNSLVSLYS 377
M RP++ T V SA+A L G+ +HA+ V+ + + V++ +SLV +Y+
Sbjct: 97 RMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYA 156
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN----LFRKMKDEGLVPNQI 433
+CG+V DA R+F + ER++V++ ++ISG NG E L+ + R D G PN
Sbjct: 157 RCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSR 216
Query: 434 TFLSVLSACNHVGLVEEG 451
T S L AC +G + G
Sbjct: 217 TMESGLEACGVLGELSVG 234
>gi|347954476|gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
Length = 784
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 315/585 (53%), Gaps = 24/585 (4%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
+A ++F +P RNAV++ A++ G+V+ GM EA L M P R S C +A
Sbjct: 203 DARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASA 262
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G ++ G+ A I + +++ S+++ YC G + A IFD M EK V W
Sbjct: 263 NMGGIEEGKQSHAXXIVNGLXLDNILG-TSILNFYCXVGLIEYAEMIFDGMIEKXXVTWN 321
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ GY++ E+ + MRR + F+ +TL+ L A + G ++ R
Sbjct: 322 LLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRH 381
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G + DI+L ++ + MY + G + A KVF ++D + WN+L+S Y +G EA RLF
Sbjct: 382 GLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLF 441
Query: 258 -----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVN 308
E +P + ++W +I G + ++ E+F M + ++WT +++G V
Sbjct: 442 YEMQLESVP-PNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQ 500
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS- 367
N EEA + +M +RPN T++ LSA A A+L+ G IH ++++ N + S
Sbjct: 501 NGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASLHFGRSIHGYIIR-NQQYSFSA 559
Query: 368 -IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
I+ SLV +Y+KCG++ A R+F + + YN+MIS +A G EA+ L+R ++D
Sbjct: 560 WIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDG 619
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G+ P+ IT S+LSACN+ V + F M + + ++P EHY MVD+L AG +
Sbjct: 620 GVKPDNITITSLLSACNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGETDK 679
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A+ L+ M ++P + +L + +L + ++HL+E EPD++ YV++S+ Y+V
Sbjct: 680 ALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNAYAV 739
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILK---DKVHLFLAGRK 588
G + ++R K+K ++K PGCSWI +K + VH+F+A K
Sbjct: 740 EGSWDEVAKMREMMKVKGLKKKPGCSWIQIKGEEEGVHVFVANDK 784
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 147/528 (27%), Positives = 256/528 (48%), Gaps = 64/528 (12%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP 65
S SY +++L N I EA + M RN + I G + +G YE
Sbjct: 12 STSYFHRVSSLCKNG-EIREALSLVTEMDYRN-IRIGPEIYGEILQGCVYE--------- 60
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
RD + + LK G + AR +E +V + Y K + A+ +F
Sbjct: 61 ---RDLCTGQQIHAQILKKG--DFYAR--NEYIETKLVIF------YAKCDALEIAQVLF 107
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
K+ +NV +W A++ ++ E F+ M G+ ++ + + +ACG R
Sbjct: 108 SKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSR 167
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
G VHG V++ G + + + +S+ MYG+ G +D+A KVF + R+AV+WN+L+ GYV
Sbjct: 168 FGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYV 227
Query: 246 HNGEIEEAYRLFERM--------------------------PGK-------------DFV 266
NG EEA RL M GK D +
Sbjct: 228 QNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNI 287
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
T+++ + G +E + +F+ M EK VTW +ISG+V EEA M R++
Sbjct: 288 LGTSILNFYCXVGLIEYAEMIFDGMIEKXXVTWNLLISGYVQQGLVEEAIHMCQLMRREN 347
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
++ + +TLS+++SA+ +T L G +I + ++ +ESD+ + ++ V +Y+KCG++V+A
Sbjct: 348 LKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAK 407
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
++F + +++++ +N+++S +A +GL EAL LF +M+ E + PN IT+ ++ + G
Sbjct: 408 KVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 467
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
V E F M++ I P + M++ L + G EAI + M
Sbjct: 468 QVNEAKEMFLQMQS-SGIFPNLISWTTMMNGLVQNGCSEEAILFLRKM 514
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 209/476 (43%), Gaps = 83/476 (17%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALISGY 81
+F+ + +RN S+AA+I R G+ A +V M P + +VC +
Sbjct: 106 LFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQW 165
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+ GR + +A + V S+ D Y K G + +AR++FD +P++N VAW A++
Sbjct: 166 SRFGRGVHG-YVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMV 224
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY++ E+ L MR+ G+ +T++ A EG Q H G
Sbjct: 225 GYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNGLXL 284
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
D ILG SI+ Y +G ++ A +F M ++ V+WN LISGYV G +EEA + + M
Sbjct: 285 DNILGTSILNFYCXVGLIEYAEMIFDGMIEKXXVTWNLLISGYVQQGLVEEAIHMCQLMR 344
Query: 262 GK----DFVSWTTMITGFSSKGNLEKSIEL------------------------------ 287
+ D V+ +T+++ +S NL+ E+
Sbjct: 345 RENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIV 404
Query: 288 -----FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
F+ +KD + W ++S + ++ EA R F EM + V PN +T + ++ +
Sbjct: 405 NAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLL 464
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+N+ ++ + M+S IF N++S+ +
Sbjct: 465 RNGQVNEAKEMF-----LQMQSS---------------------GIFP-----NLISWTT 493
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLVEEGFI 453
M++G QNG EEA+ RKM++ GL PN T LSAC H G G+I
Sbjct: 494 MMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASLHFGRSIHGYI 549
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 195/427 (45%), Gaps = 55/427 (12%)
Query: 187 GVQVHGLVSRFG--FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS-- 242
G Q+H + + G + + + ++ Y + ++ A +FS + R+ SW ++I
Sbjct: 66 GQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVK 125
Query: 243 -----------GYVH---NGEIEEAYRLFERMPGKDFVSWTTM---ITGFSSKGNLEKSI 285
G+V NG + + + + W+ + G+ +K L +
Sbjct: 126 CRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCV 185
Query: 286 --------------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
++F+ +P+++ V W A++ G+V N EEA R EM ++
Sbjct: 186 FVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKE 245
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+ P ++T+S+ LSASA + +G Q HA + + D + S+++ Y G + A
Sbjct: 246 GIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXVGLIEYA 305
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
IF + E+ V++N +ISG+ Q GL EEA+++ + M+ E L + +T +++SA
Sbjct: 306 EMIFDGMIEKXXVTWNLLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTLMSAATST 365
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEH----YACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
++ G K ++ Y I G E + VD+ + GS+ A + +S T +
Sbjct: 366 QNLKLG----KEIQC-YCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDS-TVQKDLI 419
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
+W LL A + + L+ A + E++ +S P V+ +L ++ R+G K+
Sbjct: 420 LWNTLLSA---YADSGLSGEALRLFYEMQLESVPPNVITWNLI-ILSLLRNGQVNEAKEM 475
Query: 562 LKRIRKS 568
+++ S
Sbjct: 476 FLQMQSS 482
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/572 (32%), Positives = 304/572 (53%), Gaps = 44/572 (7%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKK----GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
+I +V +V G +V + G + AR++FD+ PE +V W A++ GY +
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
F D +++ M+ G+ + TL + +AC G +VHG + R GF+ D+ + N
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK---- 263
++ +Y + G +++A VF + R+ VSW S+ISGY NG EA R+F +M +
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268
Query: 264 DFVSWTTMITGFSSKGNLE--KSIE---------------------------------LF 288
D+++ +++ ++ +LE KSI F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ M + + W A+ISG+ N EA F EM+ K++R + +T+ S + A A +L+
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLD 388
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+ ++ K +DV + +L+ +++KCG+V A +F ++++V +++MI G+
Sbjct: 389 LAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYG 448
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGP 468
+G G++A++LF MK G+ PN +TF+ +L+ACNH GLVEEG+ F SMK Y IE
Sbjct: 449 LHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMK-YYGIEARH 507
Query: 469 EHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
+HYAC+VD+LGR+G L EA D I +M EP VWGALLGA + + ++ L + AA+ L
Sbjct: 508 QHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFS 567
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
L+P + YV LS+LY+ +VR+ + K + K G S I + K+ F G K
Sbjct: 568 LDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDK 627
Query: 589 SCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
S KEI L+++ + KE + H S+L
Sbjct: 628 SHPRFKEIFEELESLERRLKEAGFIPHIESVL 659
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 191/430 (44%), Gaps = 50/430 (11%)
Query: 12 MITALINNNCSIYE---AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW 68
++T +N + +I E A ++F P + + A+I G+ F +A E+Y M A
Sbjct: 105 LVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASG 164
Query: 69 RDS-----VCSNALISGY--LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
+ C SG L+VG+ +IF E DV +V Y K GRV +A
Sbjct: 165 VNPDGFTLPCVLKACSGVPVLEVGK-RVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQA 223
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF 181
R +F+ + ++N+V+WT+M+ GY + + +F MR+ + + I L + A
Sbjct: 224 RIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDV 283
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
+G +HG V + G +++ L S+ MY + G + A F M + + WN++I
Sbjct: 284 EDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMI 343
Query: 242 SGYVHNGEIEEAYRLFERMPGK----------------------DFVSW----------- 268
SGY NG EA LF+ M K D W
Sbjct: 344 SGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYR 403
Query: 269 ------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
T +I F+ G+++ + E+F+ +KD V W+A+I G+ + + ++A F M
Sbjct: 404 NDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAM 463
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ V PN +T +L+A + + +G ++ + +E+ +V L + G++
Sbjct: 464 KQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHL 523
Query: 383 VDAYRIFTNI 392
+AY T +
Sbjct: 524 NEAYDFITTM 533
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 7/236 (2%)
Query: 13 ITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR--WRD 70
+TA+ + A F M + N + + AMI+G+ + G EA L+ M ++ D
Sbjct: 311 LTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTD 370
Query: 71 SVCSNALISGYLKVGRCEEAA----RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFD 126
S+ + I +VG + A I + DV +++D + K G V ARE+FD
Sbjct: 371 SITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFD 430
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+ +K+VV W+AM+ GY +D DLF +M++ G+ N +T L AC E
Sbjct: 431 RTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEE 490
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLI 241
G ++ + +G + ++ + GR G ++EA + M VS W +L+
Sbjct: 491 GWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALL 546
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
SS+L S LNQ IHA +V + + V+ G + A ++F
Sbjct: 74 FSSLLDHSVHKRHLNQ---IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFP 130
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
E ++ +N++I G++ + +A+ ++ +M+ G+ P+ T VL AC+ V ++E G
Sbjct: 131 EPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVG 188
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 189/650 (29%), Positives = 329/650 (50%), Gaps = 49/650 (7%)
Query: 7 ASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA 66
A N++I+ + N ++ A IF + R+ +S+ +++ + + G E+ ++ N+
Sbjct: 297 AVENSLIS-MFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIF-NLMR 354
Query: 67 RWRDSVCSNALISGYLKVGRCEEA--ARIFEAMVEK-----DVVAWGSMVDGYCKKGRVI 119
R+ D V S + + +G + R +V K V +++ Y GR
Sbjct: 355 RFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSE 414
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EA +F +MP K++++W +++ ++ D + SM R G + N +T T AC
Sbjct: 415 EADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACF 474
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
+ +G +HGLV G + I+GN++++MYG++G M + +V M +RD V+WN+
Sbjct: 475 SPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNA 534
Query: 240 LISGYVHNGEIEEAYRLFERM---------------------PG---------------- 262
LI GY N + ++A F+ + PG
Sbjct: 535 LIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSA 594
Query: 263 ---KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
D ++IT ++ G+L S +LFN + + +TW AI++ ++ EE +
Sbjct: 595 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLV 654
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+M + +Q + S LSA+A A L +G Q+H VK+ E D I N+ +YSKC
Sbjct: 655 SKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKC 714
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G + + ++ R++ S+N +IS ++G EE F +M + G+ P +TF+S+L
Sbjct: 715 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLL 774
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
+AC+H GLV++G Y+ + + +EP EH C++D+LGR+G LAEA I+ M +P
Sbjct: 775 TACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 834
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
VW +LL + + H +LD + AA++L +LEP+ + +V+ S++++ G+ D VR +
Sbjct: 835 DLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQ 894
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
K I+K CSW+ LKDKV F G ++ EI L+ I K KE
Sbjct: 895 MGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 944
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 156/540 (28%), Positives = 271/540 (50%), Gaps = 65/540 (12%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCE 88
+F MP+RN VS+ M++G VR G++ E E + M + ++ + L V C
Sbjct: 115 LFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDL---GIKPSSFVIASL-VTACG 170
Query: 89 EAARIFEAMVE-----------KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ +F V+ DV +++ Y G V +R++F++MP++NVV+WT
Sbjct: 171 RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 230
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
+++ GY E+ D++ SMR G+ N +++++ +CG G Q+ G V +
Sbjct: 231 SLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKS 290
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
G + + + NS+I+M+G +G +D AN +F+ +S+RD +SWNS+++ Y NG IEE+ R+F
Sbjct: 291 GLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIF 350
Query: 258 ERMPG-KDFVSWTTMIT------------------------GFSS--------------K 278
M D V+ TT+ T GF S
Sbjct: 351 NLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 410
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G E++ +F MP KD ++W ++++ FVN+ + +A M+R N +T +S L
Sbjct: 411 GRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSAL 470
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
+A + ++G +H VV + + I N+LVS+Y K G + + R+ + R++V
Sbjct: 471 AACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVV 530
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG-LVEEGFIYFKS 457
++N++I G+A+N ++AL F+ ++ EG+ N IT +SVLSAC G L+E G K
Sbjct: 531 AWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERG----KP 586
Query: 458 MKTLYNIEPG---PEHYA-CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+ Y + G EH ++ + + G L+ + DL N + W A+L A H
Sbjct: 587 LHA-YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSII-TWNAILAANAHH 644
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 260/541 (48%), Gaps = 66/541 (12%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS------GY 81
++F MP RN VS+ +++ G+ +G E ++Y +M R C+ +S G
Sbjct: 216 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSM--RGEGVECNENSMSLVISSCGL 273
Query: 82 LK---VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
LK +GR + ++ ++ +E + S++ + G V A IF+++ E++ ++W +
Sbjct: 274 LKDESLGR-QIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNS 332
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+V Y + E+ +F MRR NS T++ L G + G +HGLV + G
Sbjct: 333 IVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMG 392
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
FD + + N+++ MY G +EA+ VF M +D +SWNSL++ +V++G +A +
Sbjct: 393 FDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILC 452
Query: 259 RM--PGK--DFVSWTT-----------------------------------MITGFSSKG 279
M GK ++V++T+ +++ + G
Sbjct: 453 SMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIG 512
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
+ S + MP +D V W A+I G+ NE ++A F + + V N +T+ SVLS
Sbjct: 513 GMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLS 572
Query: 340 ASAATAT-LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
A L +G +HA++V ESD ++NSL+++Y+KCG++ + +F +D R+I+
Sbjct: 573 ACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSII 632
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
++N++++ A +G GEE L L KM+ GL +Q +F LSA + ++EEG +
Sbjct: 633 TWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEG-QQLHGL 691
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV------WGALLGAGRT 512
E + D+ + G + E + ++ PP V W L+ A
Sbjct: 692 AVKLGFELDCFIFNAAADMYSKCGEIGEVVKML-------PPSVNRSLPSWNILISALGR 744
Query: 513 H 513
H
Sbjct: 745 H 745
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 245/516 (47%), Gaps = 53/516 (10%)
Query: 79 SGYLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
+G+ ++ R E R A+ K V+ ++++ Y K GRV AR +FDKMP +N
Sbjct: 66 TGFSQITR-ETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNE 124
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR-YREGVQVHG 192
V+W M+ G ++V + +G + F M G+ +S + L ACGR +REGVQVHG
Sbjct: 125 VSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 184
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V++ G D+ + +I+ +YG G + + KVF M R+ VSW SL+ GY GE EE
Sbjct: 185 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 244
Query: 253 AYRLFERMPGK---------------------------------------DFVSWTTMIT 273
+++ M G+ ++I+
Sbjct: 245 VIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLIS 304
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
F + GN++ + +FN + E+D ++W +I++ + N EE+ R F M R N T
Sbjct: 305 MFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTT 364
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+S++LS G IH VVKM +S V + N+L+ +Y+ G +A +F +
Sbjct: 365 VSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP 424
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
++++S+NS+++ F +G +AL + M G N +TF S L+AC ++G I
Sbjct: 425 TKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRI 484
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGR 511
+ + + +V + G+ G ++ + ++ M P V W AL+G
Sbjct: 485 -LHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQM---PRRDVVAWNALIGGYA 540
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ + D A LAA + +E SA V+S L + +
Sbjct: 541 ENEDPDKA-LAAFQTLRVEGVSANYITVVSVLSACL 575
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 180/623 (28%), Positives = 323/623 (51%), Gaps = 46/623 (7%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLK 83
A ++F MP+R+ VS+ ++I+G+ G + EA E+Y + W DS ++++ +
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFAN 219
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDG----YCKKGRVIEAREIFDKMPEKNVVAWTAM 139
+ ++ + ++ V + + +G Y K R +AR +FD+M ++ V + M
Sbjct: 220 LLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTM 279
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
+ GY+K++ E+ +FL + +T+T + ACG ++ + R GF
Sbjct: 280 ICGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGF 338
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ + N +I +Y + G M A VF+ M +D VSWNS+ISGY+ +G++ EA +LF+
Sbjct: 339 VLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKM 398
Query: 260 M----PGKDFVSWTTMIT------------GFSSKG-----------------------N 280
M D +++ +I+ G S G
Sbjct: 399 MMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGE 458
Query: 281 LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+ S+++FN M D VTW +IS V + + +M + V P+ T L
Sbjct: 459 VGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPM 518
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
A+ A G +IH +++ ES++ I N+L+ +YSKCG + ++R+F + R++V++
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTW 578
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
MI + G GE+AL F M+ G+VP+ + F++++ AC+H GLVE+G F+ MKT
Sbjct: 579 TGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKT 638
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
Y I+P EHYAC+VD+L R+ +++A + I +M EP +W ++L A RT +++ A+
Sbjct: 639 HYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAE 698
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
++ ++EL PD ++ S+ Y+ + K + +R + K I+K+PG SWI + KV
Sbjct: 699 RVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKV 758
Query: 581 HLFLAGRKSCLDLKEIEVTLQTI 603
H+F +G S + I +L+ +
Sbjct: 759 HVFCSGDDSAPQSEAIHKSLEIL 781
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 219/457 (47%), Gaps = 52/457 (11%)
Query: 34 PMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEA--- 90
P +N + ++I F + G F +A E Y + R+S S + + C
Sbjct: 67 PAKNVYIWNSIIRAFSKNGWFPKALEFY----GKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 91 -------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
+I E E D+ ++VD Y + G + AR++FD+MP +++V+W +++ GY
Sbjct: 123 EMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGY 182
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
+E+ +++ +R + +S T++ + A ++G +HG + G +
Sbjct: 183 SSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVS 242
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF------ 257
++ N ++ MY + +A +VF M RD+V++N++I GY+ +EE+ ++F
Sbjct: 243 VVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ 302
Query: 258 ----------------------------ERMPGKDFVSWTT----MITGFSSKGNLEKSI 285
M FV +T +I ++ G++ +
Sbjct: 303 FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITAR 362
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
++FN M KD V+W +IISG++ + EA + F M+ + + + +T ++S S A
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLA 422
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
L G +H++ +K + D+S+ N+L+ +Y+KCG V D+ +IF ++ + V++N++IS
Sbjct: 423 DLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVIS 482
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+ G L + +M+ +VP+ TFL L C
Sbjct: 483 ACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMC 519
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 109/193 (56%), Gaps = 2/193 (1%)
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIELFNMM-PEKDDVTWTAIISGFVNNEQYEEAFRW 318
+ G DF S +I +S S+ +F + P K+ W +II F N + +A +
Sbjct: 35 LDGSDFFS-GKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEF 93
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
+ ++ V P++ T SV+ A A G ++ +++M ESD+ + N+LV +YS+
Sbjct: 94 YGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSR 153
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
G + A ++F + R++VS+NS+ISG++ +G EEAL ++ ++++ +VP+ T SV
Sbjct: 154 MGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSV 213
Query: 439 LSACNHVGLVEEG 451
L A ++ +V++G
Sbjct: 214 LPAFANLLVVKQG 226
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 3/175 (1%)
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE-RNIV 398
A ++++ LN+ +IHA V+ + ++ L+ YS + +F + +N+
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVY 72
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
+NS+I F++NG +AL + K+++ + P++ TF SV+ AC + E G + +K +
Sbjct: 73 IWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQI 132
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+ E +VD+ R G L+ A + + M W +L+ +H
Sbjct: 133 LEM-GFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVS-WNSLISGYSSH 185
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 279/497 (56%), Gaps = 32/497 (6%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + A IF+ + + + ++ + K F LF +R G++ ++ T +F
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
+A G REG +V+G V + G ++D + NS++ MY +G + +VF M +RD V
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 236 SWNSLISGYVHNGEIEEAY----RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
SWN LISGYV E+A ++F MP K + WT+M++G+ + G L+++ ELF
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERS 259
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
P +D V WTA+I+G+V ++++A F EM K V P++ TL ++L+
Sbjct: 260 PVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLT------------ 307
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
D + +L+ +Y+KCG + + IF + E++ S+ S+I G A NG
Sbjct: 308 -------------DAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNG 354
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
+AL LF +M G+ P+ ITF+ VLSAC+H GLVEEG +F+SM +Y IEP EHY
Sbjct: 355 KTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHY 414
Query: 472 ACMVDILGRAGSLAEAIDLIN---SMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME 528
C++D+LGRAG L EA +LI ++ E ++GALL A RTH N+++ + A+ L+
Sbjct: 415 GCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVG 474
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
+E ++ + +L+++Y+ + D +VR K K ++K PGCS + + VH FL G
Sbjct: 475 IESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDA 534
Query: 589 SCLDLKEIEVTLQTISK 605
S +++EI L +I+K
Sbjct: 535 SHPEMREIYSMLDSIAK 551
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 183/415 (44%), Gaps = 60/415 (14%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALIS 79
+++ A IF + + Y +I F + G F +A L+ + D+ +
Sbjct: 81 NLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFK 140
Query: 80 GYLKVGRCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+G E +++ +V E D S++D Y + GRV R++F++MP+++VV+
Sbjct: 141 AIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVS 200
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W ++ GY+K +ED D+F + FN + +
Sbjct: 201 WNVLISGYVKCRRYEDAVDVFRQI------FNDMPIKT---------------------- 232
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+I S+++ Y G +DEA ++F RD V W ++I+GYV ++A
Sbjct: 233 -------VICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVA 285
Query: 256 LFERMPGK--------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
LF M K D V T +I ++ G +EKS+E+FN + EKD +WT+
Sbjct: 286 LFREMQIKRVSPDRFTLVALLTDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTS 345
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG-SQIHAHVVKM 360
II G N + +A F EM++ V+P+ +T VLSA + + +G +
Sbjct: 346 IICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVY 405
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIF---TNIDERNIVS-YNSMISGFAQNG 411
+E + L+ L + G + +A + N++ IV Y +++S +G
Sbjct: 406 QIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHG 460
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 171/385 (44%), Gaps = 62/385 (16%)
Query: 52 GMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAA----RIFEAMVEKDVVAWGS 107
G +++ MP R D V N LISGY+K R E+A +IF M K V+ W S
Sbjct: 181 GRVQNLRQVFEEMPQR--DVVSWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTS 238
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
MV GY G++ EARE+F++ P ++VV WTAM++GY++ + F+D LF M+ ++ +
Sbjct: 239 MVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPD 298
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
TL L D ++G ++I MY + GF++++ ++F+
Sbjct: 299 RFTLVALLT-------------------------DAVVGTALIEMYAKCGFIEKSLEIFN 333
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
+ ++D SW S+I G NG+ +A LF M + TG
Sbjct: 334 GLKEKDTASWTSIICGLAMNGKTSKALELFAEM----------VQTGV------------ 371
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATAT 346
+ DD+T+ ++S + EE + F M + P ++
Sbjct: 372 -----KPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQ 426
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI---FTNIDERNIVSYNSM 403
L++ ++ +N E V + +L+S GNV R+ I+ + + +
Sbjct: 427 LDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLL 486
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGL 428
+ +A E+ + RKMKD G+
Sbjct: 487 ANIYASADRWEDVTKVRRKMKDLGV 511
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 93/175 (53%)
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
S GNL + +FN + + +I F N + +A F ++ + + P+ T
Sbjct: 78 SIGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPF 137
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
V A + +G +++ VVK +E D + NSL+ +Y++ G V + ++F + +R+
Sbjct: 138 VFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRD 197
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+VS+N +ISG+ + E+A+++FR++ ++ + I + S++S + G ++E
Sbjct: 198 VVSWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEA 252
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 187/606 (30%), Positives = 310/606 (51%), Gaps = 55/606 (9%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-----------PARWRD 70
S+ +A +F MP R+ V++ A+I+G V G E V M +R +
Sbjct: 160 SVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTME 219
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
S + G L VG C + +A V S+ Y K +AR +F ++PE
Sbjct: 220 SGLEACGVLGELSVGTCLHGFGV-KAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPE 278
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K++V+WT+++ Y + E +LFL M G+ + + ++ L G + R G
Sbjct: 279 KDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTF 338
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG-- 248
H + R F +++GN++I+MY + +D A VF M+ +RD SW+S++ Y G
Sbjct: 339 HAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLD 398
Query: 249 -EIEEAYRLFE---------------------------------------RMPGKDFVSW 268
+ E YR + + G++
Sbjct: 399 LKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVA 458
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+I+ + GN + + ++F M+ KD VTW+A+IS + + ++A + +ML + V+
Sbjct: 459 NALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVK 518
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN TL SV+S+ A A L G IH+HV + +E D+SI +LV +Y KCG + A ++
Sbjct: 519 PNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKM 578
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F ++ ER++V++N MISG+ +G +AL LF M+ + PN +TFL++LSAC H GLV
Sbjct: 579 FDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLV 638
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
++G F M+ Y++EP +HYACMVD+LG++G L EA D++++M EP G+WG LLG
Sbjct: 639 DKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLG 697
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A + H N ++ A+ +P++ Y+++S+ Y K + ++R K + KS
Sbjct: 698 ACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKS 757
Query: 569 PGCSWI 574
G S I
Sbjct: 758 IGWSTI 763
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 225/479 (46%), Gaps = 50/479 (10%)
Query: 65 PARWRDSVCSNALIS-GYLKVGRCEEAARIFEAMVEKD--VVAWGSMVDGYCKKGRVIEA 121
P+R+ + ++A G L VG A + ++E D V S+V Y + G V +A
Sbjct: 105 PSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDA 164
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR----GGMAFNSITLTILFEA 177
+FD+MPE++VVAWTA++ G + +G + M R GG NS T+ EA
Sbjct: 165 VRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEA 224
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
CG G +HG + G + + +S+ +MY + ++A +F + ++D VSW
Sbjct: 225 CGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSW 284
Query: 238 NSLISGYVHNGEIEEAYRLFERMP--------------------------GKDFVS---- 267
SLI Y G E+A LF M GK F +
Sbjct: 285 TSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVR 344
Query: 268 ---------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+I+ ++ ++ + +F M+ ++D +W++++ + +
Sbjct: 345 RNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLEL 404
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQ---GSQIHAHVVKMNMESDVSIQNSLVSL 375
+ EM +D + +S++S ++ + L + G H + +K + S+ N+L+S+
Sbjct: 405 YREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISM 464
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y +CGN A +IF + +++V+++++IS ++ G ++AL L+ +M EG+ PN T
Sbjct: 465 YGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATL 524
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+SV+S+C ++ +E G + +K + +E +VD+ + G L A + +SM
Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDV-GLECDLSICTALVDMYMKCGQLGIARKMFDSM 582
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 148/342 (43%), Gaps = 46/342 (13%)
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P + W +++ + F MR G + T ++ A G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 189 QVHGLVSRFGF---DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
VH RFG D + + +S++ MY R G + +A ++F M +RD V+W ++ISG V
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 246 HNGEIEEAYRLFERM----------PGKDF-------------VSWTTMITGFSSKGNL- 281
NG+ E RM P +S T + GF K +
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVG 247
Query: 282 -------------------EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
E + LF +PEKD V+WT++I + E+A F+ M
Sbjct: 248 HCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM 307
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
++P+++ +S +L+ A + G HA +V+ N V I N+L+S+Y+KC V
Sbjct: 308 EESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQV 367
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
A +F + +R+ S++SM+ + + GL + L L+R+M+
Sbjct: 368 DIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQ 409
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
P DF + +++ +SS G + F P D W +++ +
Sbjct: 39 PRPDFAA--KLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASDFASTLSAHR 96
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM---ESDVSIQNSLVSLYS 377
M RP++ T V SA+A L G+ +HA+ V+ + + V++ +SLV +Y+
Sbjct: 97 RMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYA 156
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN----LFRKMKDEGLVPNQI 433
+CG+V DA R+F + ER++V++ ++ISG NG E L+ + R D G PN
Sbjct: 157 RCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSR 216
Query: 434 TFLSVLSACNHVGLVEEG 451
T S L AC +G + G
Sbjct: 217 TMESGLEACGVLGELSVG 234
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 194/601 (32%), Positives = 293/601 (48%), Gaps = 119/601 (19%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEK---DVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
N L+S Y + G E A ++F+ M E+ D+V+W S+V Y + G I A ++F++M E
Sbjct: 184 NGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTE- 242
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
DL G+ ++++L + AC + G QVH
Sbjct: 243 ----------------------DL-------GIRPDAVSLVNVLPACASVGAWSRGKQVH 273
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS--------------- 236
G R G D+ +GN+++ MY + G M+EANKVF M +D VS
Sbjct: 274 GYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFD 333
Query: 237 --------------------WNSLISGYVHNGEIEEAYRLFERM---------------- 260
W+++I+GY G EA +F +M
Sbjct: 334 DALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLL 393
Query: 261 ------------------------------PGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
PG D + +I +S + + + +F++
Sbjct: 394 SGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDL 453
Query: 291 MPEKDD--VTWTAIISGFVNNEQYEEAFRWFIEMLRKD--VRPNQLTLSSVLSASAATAT 346
+P KD VTWT +I G + + EA F +ML+ D V PN T+S L A A
Sbjct: 454 IPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGA 513
Query: 347 LNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
L G QIHA+V++ ES + + N L+ +YSK G+V A +F N+ +RN VS+ S+++
Sbjct: 514 LRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMT 573
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G+ +G GEEAL +F +M+ LVP+ +TF+ VL AC+H G+V++G YF M + +
Sbjct: 574 GYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVV 633
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
PG EHYACMVD+L RAG L EA++LI M +P P VW ALL A R + N++L + AA
Sbjct: 634 PGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQ 693
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
L+ELE + Y +LS++Y+ +D R+R K I+K PGCSW+ + F A
Sbjct: 694 LLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFA 753
Query: 586 G 586
G
Sbjct: 754 G 754
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 194/383 (50%), Gaps = 44/383 (11%)
Query: 86 RCEEA--ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV---VAWTAMV 140
RC + A +F + E +V +V Y + G AR++FD+M E+ V V+W ++V
Sbjct: 162 RCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIV 221
Query: 141 DGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
YM+ +F M G+ ++++L + AC + G QVHG R G
Sbjct: 222 AAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGL 281
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
D+ +GN+++ MY + G M+EANKVF M +D VSWN++++GY G ++A LFE+
Sbjct: 282 FEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEK 341
Query: 260 MPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
+ E+ IEL + VTW+A+I+G+ EA F
Sbjct: 342 IR--------------------EEKIEL-------NVVTWSAVIAGYAQRGLGFEALDVF 374
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK--MNME-----SDVSIQNSL 372
+ML PN +TL S+LS A+ TL G + H H +K +N++ D+ + N+L
Sbjct: 375 RQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINAL 434
Query: 373 VSLYSKCGNVVDAYRIFTNI--DERNIVSYNSMISGFAQNGLGEEALNLFRKM--KDEGL 428
+ +YSKC + A +F I +R++V++ +I G AQ+G EAL LF +M D +
Sbjct: 435 IDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFV 494
Query: 429 VPNQITFLSVLSACNHVGLVEEG 451
+PN T L AC +G + G
Sbjct: 495 MPNAFTISCALMACARLGALRFG 517
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 170/486 (34%), Positives = 272/486 (55%), Gaps = 17/486 (3%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACG 179
AR+IF M N ++ ++ + + D +F+ M + N T +F+ACG
Sbjct: 64 ARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACG 123
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
R R REG QVHGL +FG D D + ++++ MY G M++A+++F D
Sbjct: 124 RAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGC---- 179
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+ R +R D V W MI G+ G LE + LF+ MP++ V+W
Sbjct: 180 ------------DGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSW 227
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+I+G+ + ++EA F EM +V PN +TL SVL A + L G +H + V+
Sbjct: 228 NVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVR 287
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
N+ D + ++L+ +Y+KCG++ A ++F + +RN+V+++++I+G A +G ++ L+
Sbjct: 288 NNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDH 347
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F M+ G++P+ +T++ +LSAC+H GLV EG +F M + +EP EHY CMVD+LG
Sbjct: 348 FEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLG 407
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L E+ +LI +M +P +W ALLGA + H N+++ K A+HLMEL P + YV
Sbjct: 408 RAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVA 467
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
LS++Y+ +G +VR+ K +RK PGCSWI L +H FL S K+I
Sbjct: 468 LSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSM 527
Query: 600 LQTISK 605
LQ +S+
Sbjct: 528 LQEMSR 533
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 185/416 (44%), Gaps = 58/416 (13%)
Query: 8 SYNAMITALINNN--CS----IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY 61
SYN +I AL +N C E E + P N ++ ++ R E +++
Sbjct: 78 SYNTLIRALSESNDPCDALLVFIEMVEDCSVEP--NCFTFPSVFKACGRAERLREGRQVH 135
Query: 62 ---VNMPARWRDSVCSNALISGYLKVGRCEEAARIF---------------EAMVEKDVV 103
V + V SN ++ YL G E+A R+F + V+ DVV
Sbjct: 136 GLAVKFGLDSDEFVVSN-VVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVV 194
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
W M+DGY + G + AR +FD+MP+++VV+W M+ GY + F++ ++F M+
Sbjct: 195 LWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAE 254
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+ N +TL + A R G VH R D +LG+++I MY + G +++A
Sbjct: 255 VPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKAL 314
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKG 279
+VF + KR+ V+W+++I+G +G ++ FE M V++ +++ S G
Sbjct: 315 QVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAG 374
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-------------- 325
+ + F+ M +SG E E + +++L +
Sbjct: 375 LVNEGRWFFDHMVR---------VSGL---EPRIEHYGCMVDLLGRAGLLEESEELILNM 422
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
++P+ + ++L A + G ++ H++++ D +L ++Y+ GN
Sbjct: 423 PIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMEL-APHDSGSYVALSNIYASLGN 477
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 137/314 (43%), Gaps = 58/314 (18%)
Query: 273 TGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQ 331
+ S +L+ + ++F M + ++ +I + +A FIEM+ V PN
Sbjct: 53 SAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNC 112
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR---- 387
T SV A L +G Q+H VK ++SD + +++V +Y CG + DA+R
Sbjct: 113 FTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYR 172
Query: 388 ------------------------------------------IFTNIDERNIVSYNSMIS 405
+F + +R++VS+N MI+
Sbjct: 173 RVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIA 232
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNI 464
G+AQ+G +EA+ +FR+M+ + PN +T +SVL A + +G +E G +++ +++ NI
Sbjct: 233 GYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRN--NI 290
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTHLNLDLAKLA 522
+ ++D+ + GS+ +A+ + + P V W ++ H AK
Sbjct: 291 GVDDVLGSALIDMYAKCGSIEKALQVFEGL---PKRNVVTWSTIIAGLAMH---GRAKDT 344
Query: 523 AQHLMELEPDSATP 536
H ++E P
Sbjct: 345 LDHFEDMERAGVMP 358
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 308/580 (53%), Gaps = 50/580 (8%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-----------SVCSNALISGYLKVG 85
NA A M+ GF+R G A L+ + RD +V + A S +
Sbjct: 96 NAYMLATMMRGFLRAGKPTHALTLFRRV---LRDRLAVDARTIVFAVKAAATSSSPTEAI 152
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
C R F + + V+A ++V Y + +AR++FD+M +++VV+WT ++DGY +
Sbjct: 153 HCVAFKRGF---IGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYAR 209
Query: 146 VDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
++ + +F M + N +TL A G+ G VH + G +
Sbjct: 210 GGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVN 269
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
L N+++ M+G+ G + A +VF + MP KD
Sbjct: 270 LENALVDMFGKCGCVAAAKEVF-------------------------------DGMPIKD 298
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
SWT+M++ ++ G+LE + +LF +P ++ V+W+ +++ + + +EA R F +M+
Sbjct: 299 VYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIA 358
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIH-AHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
V P TL SVLSA A +L+ G+ ++ ++V +E ++ N+ + +++KCG+V
Sbjct: 359 AGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVG 418
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A R+F+N++++N+VS+N+MI +G EEAL+LF++ K G++P++ T++ VLSAC+
Sbjct: 419 AASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACS 478
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H GLV EG +FK MK +Y IEP EHYACM+D+LG+ G L EA ++ SM W
Sbjct: 479 HGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGW 538
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
GALL A R H N+++ K AA L L+P + YV++S +Y+ K +R + +
Sbjct: 539 GALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDR 598
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
R++K+PGCS I + K H FL S + ++I L I
Sbjct: 599 RVKKNPGCSSIEVDGKCHEFLVADVSHVHSEDIYAALGNI 638
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 117/297 (39%), Gaps = 45/297 (15%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA++ C + A E+F MP+++ S+ +M++ + + G A +L+ +P R
Sbjct: 272 NALVDMFGKCGC-VAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPN--R 328
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEK----------------------DVVAW-- 105
+ V + +++ Y +EA RIF M+ DV W
Sbjct: 329 NVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLY 388
Query: 106 ----------------GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
+ +D + K G V A +F M +KNVV+W M+ +
Sbjct: 389 DTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQP 448
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG-VQVHGLVSRFGFDYDIILGNS 208
E+ LF + G+ + T + AC EG + +G +
Sbjct: 449 EEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYAC 508
Query: 209 IITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
+I + G++G + EA +V SM D W +L++ +G +E +++ G D
Sbjct: 509 MIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLAGLD 565
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 256/411 (62%), Gaps = 8/411 (1%)
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP 261
++I +++T Y ++ ++ A + F M +R VSWN+++SGY NG EEA RLF+ M
Sbjct: 104 NVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEML 163
Query: 262 G--KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
G ++ V+W MI+ + G+L+ + +LFN MP ++ VTW ++I+G+ N Q A F
Sbjct: 164 GAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELF 223
Query: 320 IEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
EM+ K + P+++T+ SV+SA L G+ + + + ++ +S N+++ +YS+
Sbjct: 224 KEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSR 283
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG++ DA R+F + R++VSYN++ISGFA +G G EA+NL MK+ G+ P+++TF+ V
Sbjct: 284 CGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGV 343
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
L+AC+H GL+EEG F+S+K +P +HYACMVD+LGR G L +A + M EP
Sbjct: 344 LTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEP 398
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
GV+G+LL A R H ++L +LAA L ELEPD++ +++LS++Y+ G+ +D R+R
Sbjct: 399 HAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIRE 458
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
K ++K+ G SW+ K+H F+ +S +I L + K +E
Sbjct: 459 AMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMRE 509
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 194/397 (48%), Gaps = 18/397 (4%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R A +NAM++ S +A +F MP RN +++ AM+TG+ + A
Sbjct: 69 MYARKVADWNAMVSGYWKWE-SEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRY 127
Query: 61 YVNMPARWRDSVCS-NALISGYLKVGRCEEAARIFEAMVE--KDVVAWGSMVDGYCKKGR 117
+ MP R SV S NA++SGY + G EEA R+F+ M+ ++ V W +M+ Y + G
Sbjct: 128 FDCMPER---SVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGD 184
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTILFE 176
+ AR++F+ MP +NVV W +M+ GY + +LF M + + +T+ +
Sbjct: 185 LDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVIS 244
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
ACG G V ++ I N++I MY R G M++A +VF M+ RD VS
Sbjct: 245 ACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVS 304
Query: 237 WNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
+N+LISG+ +G EA L M D V++ ++T S G LE+ ++F +
Sbjct: 305 YNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK 364
Query: 293 EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQ 352
+ + ++ + E+A R M R + P+ S+L+AS + G +
Sbjct: 365 DPAIDHYACMVDLLGRVGELEDAKR---TMERMPMEPHAGVYGSLLNASRIHKQVELG-E 420
Query: 353 IHAHVVKMNMESDVSIQNSLVS-LYSKCGNVVDAYRI 388
+ A+ + +E D S L+S +Y+ G D RI
Sbjct: 421 LAANKL-FELEPDNSGNFILLSNIYASAGRWKDVERI 456
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 162/342 (47%), Gaps = 61/342 (17%)
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
++ M+ G+ ++ IL ++ G G+ H V + G D + N++I MY
Sbjct: 17 MYEQMQGCGVRPDAFVYPILIKSAGT-----GGIGFHAHVLKLGHGSDAFVRNAVIDMYA 71
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
R WN+++SGY +A LF+ MP ++ ++WT M+TG
Sbjct: 72 R-----------------KVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTG 114
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ +LE + F+ MPE+ V+W A++SG+ N EEA R F EML N +T
Sbjct: 115 YAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEML--GAYRNSVTW 172
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
N+++S Y + G++ A ++F +
Sbjct: 173 -----------------------------------NAMISAYMRVGDLDSARKLFNTMPG 197
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
RN+V++NSMI+G+AQNG A+ LF++M + L P+++T +SV+SAC H+G +E G
Sbjct: 198 RNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNW 257
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMT 495
+ + T I+ + M+ + R GS+ +A + M
Sbjct: 258 VVRFL-TENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMA 298
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 177/418 (42%), Gaps = 99/418 (23%)
Query: 47 GFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG 106
FVR + ++Y A W NA++SGY K +A +F+ M E++V+ W
Sbjct: 60 AFVRNAVI----DMYARKVADW------NAMVSGYWKWESEGQAQWLFDVMPERNVITWT 109
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+MV GY K + AR FD MPE++VV+W AM+ GY + E+ LF M G
Sbjct: 110 AMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEML--GAYR 167
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
NS+T N++I+ Y R+G +D A K+F
Sbjct: 168 NSVTW-----------------------------------NAMISAYMRVGDLDSARKLF 192
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------PGK---------------- 263
+ M R+ V+WNS+I+GY NG+ A LF+ M P +
Sbjct: 193 NTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGAL 252
Query: 264 DFVSWT-----------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+ +W MI +S G++E + +F M +D V++ +ISGF
Sbjct: 253 ELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGF 312
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
+ EA M + P+++T VL+A + L +G ++ + D
Sbjct: 313 AAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESI------KDP 366
Query: 367 SIQN--SLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISG---FAQNGLGEEALN 418
+I + +V L + G + DA R + E + Y S+++ Q LGE A N
Sbjct: 367 AIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAAN 424
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 266/481 (55%), Gaps = 45/481 (9%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C R E HG R D+ L N +I Y + GF++ A +VF M +R
Sbjct: 69 ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERS 128
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDF---------------------------- 265
VSWN++I Y N EA +F M + F
Sbjct: 129 LVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHC 188
Query: 266 -----------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
T ++ ++ G + ++++F M +K VTW+++++G+V ++ YEE
Sbjct: 189 LSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEE 248
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A + R + NQ TLSSV+ A + A L +G Q+HA + K S+V + +S V
Sbjct: 249 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVD 308
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+KCG++ ++Y IF+ + E+NI +N++ISGFA++ +E + LF KM+ +G+ PN++T
Sbjct: 309 MYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 368
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F S+LS C H GLVEEG +FK M+T Y + P HY+CMVDILGRAG L+EA +LI S+
Sbjct: 369 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 428
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
FEP +WG+LL + R NL+LA++AA+ L ELEP++A +V+LS++Y+ +
Sbjct: 429 PFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAA---NKQWE 485
Query: 555 RVRMKKKLKR---IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD 611
+ +KL R ++K G SWI +KDKVH+F G S ++EI L + ++F
Sbjct: 486 EIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFG 545
Query: 612 W 612
+
Sbjct: 546 Y 546
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 188/412 (45%), Gaps = 60/412 (14%)
Query: 33 MPMR-NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGR-CEEA 90
+P R N S + I+ F YE EEL P R+ D + S ++++ + C
Sbjct: 25 LPRRSNTSSLSRNISVFAS----YEQEELS---PGRYSDEF-NVVQASDFIEILQLCARN 76
Query: 91 ARIFEAM----------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
+ EA ++ DV +++ Y K G V AR++FD M E+++V+W M+
Sbjct: 77 GAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMI 136
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
Y + + D+F MR G F+ T++ + ACG E ++H L + D
Sbjct: 137 GLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLD 196
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA---YRLF 257
++ +G +++ +Y + G +++A +VF M + +V+W+S+++GYV + EEA YR
Sbjct: 197 LNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRA 256
Query: 258 ERMP------------------------------------GKDFVSWTTMITGFSSKGNL 281
+RM G + ++ + ++ G+L
Sbjct: 257 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSL 316
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+S +F+ + EK+ W IISGF + + +E F +M + + PN++T SS+LS
Sbjct: 317 RESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 376
Query: 342 AATATLNQGSQIHAHV-VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T + +G + + + +V + +V + + G + +AY + +I
Sbjct: 377 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 428
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 24/257 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS----------V 72
I +A ++F +M +++V++++M+ G+V+ + EA LY +
Sbjct: 215 INDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICA 274
Query: 73 CSN--ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
CSN ALI G + A I ++ +V S VD Y K G + E+ IF ++ E
Sbjct: 275 CSNLAALIEGK------QMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE 328
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
KN+ W ++ G+ K ++ LF M++ GM N +T + L CG EG +
Sbjct: 329 KNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 388
Query: 191 HGLV-SRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISG--YVH 246
L+ + +G +++ + ++ + GR G + EA ++ S+ + A W SL++
Sbjct: 389 FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCK 448
Query: 247 NGEIEE--AYRLFERMP 261
N E+ E A +LFE P
Sbjct: 449 NLELAEVAAKKLFELEP 465
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 276/488 (56%), Gaps = 5/488 (1%)
Query: 121 AREIFDKMP--EKNVVAWTAMVDGYMK---VDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
AR IFD +P NV WTA V Y K + F LF+ M R G N T++ +
Sbjct: 56 ARAIFDSVPAASANVYLWTATVSSYAKHASPALAAEAFPLFMFMLRSGPRPNGFTVSSVL 115
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
++ + + QVHG + + G + +G +++ YG L + +A +VF M + + V
Sbjct: 116 KSLSKLRAAHQVCQVHGFLVKAGLASSLHVGATLLDSYGNLCRVKDARRVFDEMPRSNVV 175
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
N+++SGYV G++E A ++F+ M +D +SW T+++G+ +G+ + +LF+ MP+++
Sbjct: 176 VGNAMVSGYVKAGDVEAARQVFDGMVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQRN 235
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
+W +IS + ++ F +M RP+ T++ ++SA A L+ Q++
Sbjct: 236 VNSWNMMISACSEVGLWADSVAVFNQMRFMSFRPDAATMAVLMSACAQLGFLSVARQVYG 295
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
+ K +E + + NSLV +++KCG +A+ +F +D +++VSYN M+S A +G G++
Sbjct: 296 LLRKGCVEMNCHVHNSLVDMFAKCGCFSEAHLLFAEMDPKDVVSYNVMVSALAHHGHGKD 355
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
AL LF +M + GL P+ +TFL VLSAC H GLV+ G YF++M T Y IE +HYACMV
Sbjct: 356 ALKLFEQMIEGGLQPDAVTFLGVLSACAHAGLVDSGKYYFETMGTTYAIEKSADHYACMV 415
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D+ GR G + EA + M +P G+WGALL A R H N+D+ ++AA+ L+ +EP +
Sbjct: 416 DLYGRVGLIEEAHYFVKIMPVKPHAGIWGALLNACRKHCNIDVGEVAARELIRIEPMNPG 475
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKE 595
YV+LS+ + + VR + I K+ G SW+ ++ VH FL G S E
Sbjct: 476 NYVLLSNTLAWSQQWDAVGDVRQLMRGNGIDKNTGFSWVEVESVVHEFLMGDFSHPSFDE 535
Query: 596 IEVTLQTI 603
I L+ +
Sbjct: 536 ICGILELL 543
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 171/329 (51%), Gaps = 17/329 (5%)
Query: 56 EAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
+A ++ MP + V NA++SGY+K G E A ++F+ MVE+D ++W +++ GY ++
Sbjct: 161 DARRVFDEMPRS--NVVVGNAMVSGYVKAGDVEAARQVFDGMVERDSISWNTLMSGYLRR 218
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G AR++FD+MP++NV +W M+ +V + D +F MR ++ T+ +L
Sbjct: 219 GDAGLARDLFDEMPQRNVNSWNMMISACSEVGLWADSVAVFNQMRFMSFRPDAATMAVLM 278
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
AC + QV+GL+ + + + + NS++ M+ + G EA+ +F+ M +D V
Sbjct: 279 SACAQLGFLSVARQVYGLLRKGCVEMNCHVHNSLVDMFAKCGCFSEAHLLFAEMDPKDVV 338
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
S+N ++S H+G ++A +LFE+M D V++ +++ + G ++ F M
Sbjct: 339 SYNVMVSALAHHGHGKDALKLFEQMIEGGLQPDAVTFLGVLSACAHAGLVDSGKYYFETM 398
Query: 292 P-----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
EK + ++ + EEA +F++++ V+P+ ++L+A
Sbjct: 399 GTTYAIEKSADHYACMVDLYGRVGLIEEA-HYFVKIM--PVKPHAGIWGALLNACRKHCN 455
Query: 347 LNQGSQIHAHVVK---MNMESDVSIQNSL 372
++ G +++ MN + V + N+L
Sbjct: 456 IDVGEVAARELIRIEPMNPGNYVLLSNTL 484
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/533 (31%), Positives = 295/533 (55%), Gaps = 44/533 (8%)
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
+ ++ E++V S++ Y + G EA ++F+ + K++ M+ Y K +
Sbjct: 36 VIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKDLRCLNCMILEYGKAGYEKRA 95
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
+F+ + G+ N T T + C EG Q+HGL ++G +GN++ITM
Sbjct: 96 IGVFIYLISVGLDPNDYTFTNIISTC----NVEEGKQLHGLAVKYGVLLQTSVGNAVITM 151
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG---------- 262
YG+ G ++EA ++FS+M+K++ +SW +LISGY NG E+A F + G
Sbjct: 152 YGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYGEKAVDGFLELRGCGVECDSGLL 211
Query: 263 -----------------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPE 293
D T +I ++ N + + +FN +
Sbjct: 212 ATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSP 271
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQ 352
+ ++ AI+ GF+ N+ EE F+ LR ++P+ ++ S +LS SA A+L +G
Sbjct: 272 RSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRG 331
Query: 353 IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+HA+ +K +S+ N+L+++Y+KCG V DAY+ F ++ + +S+N++IS ++ +G
Sbjct: 332 LHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQ 391
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
GE+AL L+++M+++G P++IT L +L AC + GL E+G F +M++ Y I+P EHYA
Sbjct: 392 GEKALLLYQEMEEKGFTPDEITILVILQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYA 451
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPD 532
CMVD+LGRAG L++A+D+IN F +W L+ + +L+L KLA++HL++L PD
Sbjct: 452 CMVDLLGRAGYLSQAMDIINRSPFSESTLLWRTLVNVCKLCGDLNLGKLASKHLLDLSPD 511
Query: 533 SATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
A YV++S++Y+ G + ++VR K ++ K G SW+ + + VH F+A
Sbjct: 512 EAGSYVLVSNIYAGEGMIDEASKVRTTMKDLKLSKEAGSSWVEIDNMVHYFVA 564
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 198/417 (47%), Gaps = 42/417 (10%)
Query: 163 GMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEA 222
G FN T ++ +AC G Q+HG V + GF+ ++ +G S+I+MY R G DEA
Sbjct: 5 GEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEA 64
Query: 223 NKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--PGKDFVSWT----------- 269
KVF+ + +D N +I Y G + A +F + G D +T
Sbjct: 65 EKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCNVE 124
Query: 270 ----------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
+IT + G +E++ +F++M +K+ ++WTA+ISG+
Sbjct: 125 EGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGYT 184
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N E+A F+E+ V + L+++L + L+ G+QIH V+K+ D++
Sbjct: 185 RNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDIN 244
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLF-RKMKDE 426
I +L+ LY+KC N A +F + R+ S+N+++ GF +N EE +F +++
Sbjct: 245 IGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLA 304
Query: 427 GLVPNQITFLSVLS-ACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
G+ P+ ++F +LS + N LV+ ++ S+KT + + ++ + + G +
Sbjct: 305 GIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSN--ALITMYAKCGIVE 362
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVL 540
+A NSM+ W A++ A H + A L Q + E PD T V+L
Sbjct: 363 DAYQAFNSMSANDCIS-WNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVIL 418
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 150/300 (50%), Gaps = 20/300 (6%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA+IT + N + EA +F+ M +N +S+ A+I+G+ R G +A + ++ + R
Sbjct: 146 NAVIT-MYGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYGEKAVDGFLEL--RGC 202
Query: 70 DSVCSNALISGYLKVGRCEEAARI-----FEAMVEK-----DVVAWGSMVDGYCKKGRVI 119
C + L++ L C E + +V K D+ +++D Y K
Sbjct: 203 GVECDSGLLATILD--GCSECKNLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQ 260
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS-MRRGGMAFNSITLTILFEAC 178
AR +F+ + ++ ++ A++ G+++ D E+ +FLS +R G+ +S++ + L
Sbjct: 261 SARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLS 320
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
+G +H + GF I + N++ITMY + G +++A + F+ MS D +SWN
Sbjct: 321 ANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWN 380
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEK 294
++IS Y +G+ E+A L++ M K F ++ ++ + G E + LFN M K
Sbjct: 381 AIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQACTYSGLSEDGLHLFNTMESK 440
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 138/314 (43%), Gaps = 32/314 (10%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
++ R++AS+NA++ I N+ + + + + + ++VS++ +++ R +
Sbjct: 269 LSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVK 328
Query: 57 AEELYV-NMPARWRDSV-CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
L+ ++ + + SNALI+ Y K G E+A + F +M D ++W +++ Y
Sbjct: 329 GRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSL 388
Query: 115 KGRVIEAREIFDKMPEKNV----VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
G+ +A ++ +M EK + ++ EDG LF +M +
Sbjct: 389 HGQGEKALLLYQEMEEKGFTPDEITILVILQACTYSGLSEDGLHLFNTME------SKYG 442
Query: 171 LTILFE--ACGRFFRYREGV--QVHGLVSRFGFDYDIILGNSIIT---MYGRLGFMDEAN 223
+ L E AC R G Q +++R F +L +++ + G L A+
Sbjct: 443 IQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFSESTLLWRTLVNVCKLCGDLNLGKLAS 502
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--------PGKDFVSWTTMITGF 275
K +S +A S+ + + Y G I+EA ++ M G +V M+ F
Sbjct: 503 KHLLDLSPDEAGSYVLVSNIYAGEGMIDEASKVRTTMKDLKLSKEAGSSWVEIDNMVHYF 562
Query: 276 SSKG-NLEKSIELF 288
+ G + +SIE++
Sbjct: 563 VASGTDHPESIEIY 576
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/482 (35%), Positives = 264/482 (54%), Gaps = 35/482 (7%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
++V Y G V +AR++FD M ++VV+W M+D Y + +++ F M+ G+
Sbjct: 110 ALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLS 169
Query: 167 NSITLTILFEACGRFFRYREGVQVHG--LVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
+ + L + ACG R G +H LVS DI++ + +
Sbjct: 170 DQLILATVLSACGHIRHLRTGKSIHSYMLVS------DILINAHLSS------------- 210
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKS 284
+LI+ Y +E A +L+ MP KD VS T M+ G++ E +
Sbjct: 211 --------------ALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIA 256
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT 344
+F+ MPEKD V+W+A+ISG+ ++ Q EA F +M +RP+++T+ SV+SA A
Sbjct: 257 RYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANL 316
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+L++ IHA + + + I N+L+ +++KCG + A IF + ++N++++ SMI
Sbjct: 317 GSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMI 376
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
+ FA +G G+ AL LF +M++EG+ PN++TFL++L AC H GLV EG F SM Y I
Sbjct: 377 TAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGI 436
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
EP EHY CMVD+LGRA + EA++LI SM P VWG+LL A H +L L AA+
Sbjct: 437 EPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHGDLKLGAFAAK 496
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
+++L+P+ V+LS +Y D VR KL+ + K G SW+ L + H F
Sbjct: 497 KILQLDPNHDGASVLLSKIYMKSDNLNDAQEVRDVMKLQGVSKETGLSWMDLNEPFHEFT 556
Query: 585 AG 586
AG
Sbjct: 557 AG 558
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 155/324 (47%), Gaps = 13/324 (4%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
S+ALI+ Y E A +++ M KD+V+ +MV GY + + AR IFD MPEK+V
Sbjct: 209 SSALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDV 268
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V+W+AM+ GY + + LF M+ G+ + +T+ + AC + +H
Sbjct: 269 VSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAF 328
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G + + + N++I M+ + G ++ A +F+ M +++ ++W S+I+ + +G+ + A
Sbjct: 329 IKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSA 388
Query: 254 YRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIIS 304
LFE+M + V++ ++ G + + LF+ M ++ + + ++
Sbjct: 389 LCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVD 448
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
+ +EA M +RPN S+L+A L G+ +++++
Sbjct: 449 LLGRAKLMQEAVNLIESM---HLRPNVPVWGSLLAACWMHGDLKLGAFAAKKILQLDPNH 505
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRI 388
D L +Y K N+ DA +
Sbjct: 506 D-GASVLLSKIYMKSDNLNDAQEV 528
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 128/302 (42%), Gaps = 50/302 (16%)
Query: 14 TALIN--NNCSIYEAFE-IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
+ALIN +C+ E E ++ MP ++ VS AM+ G+ R F A ++ MP +D
Sbjct: 210 SALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPE--KD 267
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEK----------------------DVVAW--- 105
V +A+ISGY + EA +F M E D W
Sbjct: 268 VVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHA 327
Query: 106 --------------GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
+++D + K G + A IF++MP+KNV+ WT+M+ + +
Sbjct: 328 FIKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKS 387
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV-HGLVSRFGFDYDIILGNSII 210
LF MR G+ N +T L AC EG + +V ++G + ++
Sbjct: 388 ALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMV 447
Query: 211 TMYGRLGFMDEA-NKVFSMMSKRDAVSWNSLISGYVHNGEIE----EAYRLFERMPGKDF 265
+ GR M EA N + SM + + W SL++ +G+++ A ++ + P D
Sbjct: 448 DLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDG 507
Query: 266 VS 267
S
Sbjct: 508 AS 509
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
HA ++ D ++ +LV Y+ CG V DA ++F + R++VS+ M+ + Q
Sbjct: 93 HALAFRVGSLDDGFVRTALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNY 152
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+EAL F KMK+ G++ +Q+ +VLSAC H+ + G
Sbjct: 153 KEALLQFAKMKNSGVLSDQLILATVLSACGHIRHLRTG 190
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 192/630 (30%), Positives = 331/630 (52%), Gaps = 56/630 (8%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
+++I +N C I +A F M ++ V + MI G+V+ G A +L+ +M +
Sbjct: 49 SSLIKLYADNGC-IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEA 107
Query: 70 --DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG---------SMVDGYCKKGRV 118
DSV ++S C EA + + VV G ++V Y K ++
Sbjct: 108 KPDSVTFACVLSI-----SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQL 162
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+AR++FD MP+ ++V W M+ GY++ +D LF M G+ +SIT T +
Sbjct: 163 GDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSL 222
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
++ ++HG + R G D+ L +++I +Y + A K+F++ +K D V +
Sbjct: 223 AESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYT 282
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVS------------------------------- 267
++ISGYV NG ++A +F + K +
Sbjct: 283 AMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKN 342
Query: 268 --------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
+ ++ ++ G L+ + +F + KD + W +II+ F + + EEA F
Sbjct: 343 ELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLF 402
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+M + V+ + +T+S+ LSA A L+ G +IH ++K ESD+ ++L+++Y+KC
Sbjct: 403 RQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKC 462
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G + A +F + E+N V++NS+I+ + +G ++L LF M +EG+ P+ ITFL++L
Sbjct: 463 GKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTIL 522
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
S+C H G VE+G YF+ M Y I EHYACM D+ GRAG L EA ++I SM F P
Sbjct: 523 SSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPA 582
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
VWG LLGA R H N++LA++A+++L++LEP ++ Y++L+ + + GK R ++++
Sbjct: 583 ASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHL 642
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
K + ++K PGCSWI + + +F A S
Sbjct: 643 MKERGVQKVPGCSWIEVNNTTCVFFAADGS 672
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 252/510 (49%), Gaps = 56/510 (10%)
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
I E + D+ S++ Y G + +AR FDKM +K+ V W M++GY++ +
Sbjct: 36 ILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSA 95
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
LF M +S+T + G Q+HGLV R G D+ ++GN+++T+
Sbjct: 96 IKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTV 155
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSW 268
Y + + +A K+F MM + D V WN +I GYV NG +++A LF M D +++
Sbjct: 156 YSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITF 215
Query: 269 TTMITGFSSKGNLEK-----------------------------------SIELFNMMPE 293
T+ + + +L++ + ++FN+ +
Sbjct: 216 TSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTK 275
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
D V +TA+ISG+V N ++A F +L+K + PN LT SS+L A A A + G ++
Sbjct: 276 FDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGREL 335
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H +++K +E + ++++++Y+KCG + A+ IF I ++ + +NS+I+ F+Q+G
Sbjct: 336 HGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKP 395
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLVEEGFIYFKSMKT-LYNIEPG 467
EEA+ LFR+M EG+ + +T + LSAC H G GF+ + ++ L+++
Sbjct: 396 EEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDM--- 452
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
+ ++++ + G L A + N M E W +++ A H L + +++
Sbjct: 453 ----SALINMYAKCGKLNIARLVFNLMQ-EKNEVAWNSIIAAYGYHGYLADSLALFHNML 507
Query: 528 E--LEPDSATPYVVLSDLYSVIGKKRDGNR 555
E ++PD T +LS G+ DG R
Sbjct: 508 EEGIQPDHITFLTILSSCGHA-GQVEDGVR 536
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 165/321 (51%), Gaps = 39/321 (12%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + + C R G + ++ GFD D+ + +S+I +Y G +++A + F M
Sbjct: 12 TFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKM 71
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERM----------------------------- 260
+D V WN +I+GYV GE + A +LF+ M
Sbjct: 72 IDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGR 131
Query: 261 --------PGKDFVSWT--TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNE 310
G DFV T++T +S L + +LF+MMP+ D V W +I G+V N
Sbjct: 132 QLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNG 191
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
++A F EM+ ++P+ +T +S L + A +++L Q +IH ++V+ + DV + +
Sbjct: 192 FMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNS 251
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+ LY KC + V A ++F + +IV Y +MISG+ NG+ ++AL +FR + + ++P
Sbjct: 252 ALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIP 311
Query: 431 NQITFLSVLSACNHVGLVEEG 451
N +TF S+L AC + ++ G
Sbjct: 312 NALTFSSILPACAGLAAIKLG 332
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
ML V P++ T V+ + G I +++M + D+ + +SL+ LY+ G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ DA R F + +++ V +N MI+G+ Q G + A+ LF+ M P+ +TF VLS
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 442 CNHVGLVEEG 451
+VE G
Sbjct: 121 SCSEAMVEYG 130
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 270/506 (53%), Gaps = 34/506 (6%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEK---NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
S+V Y +G AR + D P + V W A++ G+ + F F+ M R G
Sbjct: 59 SLVLMYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTG 118
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+ +T + ACG+ G+QVH V G D+ +GN++I MY
Sbjct: 119 VVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECS------ 172
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEK 283
E++ A+ LFE M ++ VSWT++I+GF G +++
Sbjct: 173 -------------------------EMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQ 207
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
+ LF+ MPE+D V+WTA+I G+V Q+ EA F EM VR ++ T+ SV++A A
Sbjct: 208 ARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQ 267
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
L G ++ + ++ D + N+LV +YSKCG++ A +F + R+ ++ ++
Sbjct: 268 LGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAV 327
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
I G A NG GEEA+N+F +M P+++TF+ VL+AC H GLV++G +F SM Y
Sbjct: 328 ILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYG 387
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAA 523
I P H+ C++D+LGRAG L EA++ I +M P +WG LL A R H N ++ +LAA
Sbjct: 388 IAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAA 447
Query: 524 QHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
+HL+EL+ ++ Y++LS+LY+ + D R+R K I+K PGCS I + +H F
Sbjct: 448 EHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEF 507
Query: 584 LAGRKSCLDLKEIEVTLQTISKGTKE 609
+AG +S KEI L + K+
Sbjct: 508 IAGDRSHPMSKEIYSKLDKVLTDLKD 533
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 179/387 (46%), Gaps = 29/387 (7%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D NALI Y + + A +FE M ++ V+W S++ G+ + G+V +AR +FD MP
Sbjct: 157 DLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMP 216
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E++ V+WTAM+DGY++ F + ++F M+ + + T+ + AC + G
Sbjct: 217 ERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEW 276
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+SR G D +GN+++ MY + G + +A VF M RD +W ++I G NG
Sbjct: 277 ARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGH 336
Query: 250 IEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WT 300
EEA +F RM D V++ ++T + G ++K + F M + +
Sbjct: 337 GEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFG 396
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKM 360
+I + +EA M +RPN ++L+A G H++++
Sbjct: 397 CLIDLLGRAGKLKEALETIGNM---PMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLEL 453
Query: 361 NMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV------------SYNSMISGFA 408
+ E+ + + L +LY+K D R+ I E+ I + + I+G
Sbjct: 454 DTENGM-VYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEFIAGDR 512
Query: 409 QNGLGEEALNLFRK----MKDEGLVPN 431
+ + +E + K +KD G VP+
Sbjct: 513 SHPMSKEIYSKLDKVLTDLKDAGYVPD 539
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 45/270 (16%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A+E+F M +RN VS+ ++I+GF+R G +A L+ MP RD+V A+I GY++ G
Sbjct: 177 AWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPE--RDTVSWTAMIDGYVQAG 234
Query: 86 RCEEAARIFEAM---------------------------------------VEKDVVAWG 106
+ EA +F M ++ D
Sbjct: 235 QFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGN 294
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
++VD Y K G + +A +F +M ++ WTA++ G E+ ++F M R A
Sbjct: 295 ALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAP 354
Query: 167 NSITLTILFEACGRFFRYREGVQVH-GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKV 225
+ +T + AC +G + +G +++ +I + GR G + EA +
Sbjct: 355 DEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALET 414
Query: 226 FSMMSKR-DAVSWNSLISG-YVH-NGEIEE 252
M R ++ W +L++ VH N EI +
Sbjct: 415 IGNMPMRPNSAIWGTLLAACRVHGNSEIGQ 444
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ-GSQIHAHVVKMNMESDVSIQNSLVS 374
R ++ ML + RP+ T +L A A A G +HAHVVK ME + + +SLV
Sbjct: 3 LRVYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVL 62
Query: 375 LYSKCGNVVDAYRIFTNIDER---NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
+Y+ G+ A + R V +N++ISG ++ + F M G+VP
Sbjct: 63 MYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPT 122
Query: 432 QITFLSVLSACN 443
+T+++VLSAC
Sbjct: 123 PVTYITVLSACG 134
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 278/488 (56%), Gaps = 10/488 (2%)
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
R+ A +M E NV + A+ G++ +L++ M R ++ +S T + L +
Sbjct: 820 RLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK 879
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
A R+ E +Q H + +FGF + + + ++I Y G + EA KVF M +RD ++
Sbjct: 880 ASSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIA 937
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
W +++S Y +++ A L +M K+ + +I G+ GNLE++ LFN MP KD
Sbjct: 938 WTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDI 997
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
++WT +I G+ N++Y EA F +M+ + + P+++T+S+V+SA A L G ++H +
Sbjct: 998 ISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMY 1057
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
++ DV I ++LV +YSKCG++ A +F N+ ++N+ +NS+I G A +G +EA
Sbjct: 1058 TLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEA 1117
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L +F KM+ E + PN +TF+SV +AC H GLV+EG ++SM Y+I EHY MV
Sbjct: 1118 LKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVH 1177
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+ +AG + EA++LI +M FEP +WGALL R H NL +A++A LM LEP ++
Sbjct: 1178 LFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGY 1237
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRK-SPGCSWIILKDKVHLFLAGRKS------ 589
Y +L +Y+ + RD +R + + I K PG S I + + HLF A KS
Sbjct: 1238 YFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDE 1297
Query: 590 -CLDLKEI 596
CL L EI
Sbjct: 1298 VCLLLDEI 1305
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 128/254 (50%), Gaps = 6/254 (2%)
Query: 42 AAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKD 101
+I + G EA +++ MP R D + ++S Y +V + A + M EK+
Sbjct: 908 TTLIDFYSATGRIREARKVFDEMPER--DDIAWTTMVSAYRRVLDMDSANSLANQMSEKN 965
Query: 102 VVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR 161
+++GY G + +A +F++MP K++++WT M+ GY + + + +F M
Sbjct: 966 EATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMME 1025
Query: 162 GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDE 221
G+ + +T++ + AC G +VH + GF D+ +G++++ MY + G ++
Sbjct: 1026 EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLER 1085
Query: 222 ANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSS 277
A VF + K++ WNS+I G +G +EA ++F +M + V++ ++ T +
Sbjct: 1086 ALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTH 1145
Query: 278 KGNLEKSIELFNMM 291
G +++ ++ M
Sbjct: 1146 AGLVDEGRRIYRSM 1159
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 200/478 (41%), Gaps = 94/478 (19%)
Query: 11 AMITALINNNCSIYEAFEIFAT--------------MPMRNAVSYAAMITGFVRRGMFYE 56
AMI +N +C + F T M N Y A+ GFV
Sbjct: 795 AMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIR 854
Query: 57 AEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG---------S 107
+ ELYV M RDSV ++ Y + + A F ++ + +G +
Sbjct: 855 SLELYVRM---LRDSVSPSSYT--YSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTT 909
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++D Y GR+ EAR++FD+MPE++ +AWT MV Y +V L M N
Sbjct: 910 LIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRV----------LDMDSANSLAN 959
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
++ + + N +I Y LG +++A +F+
Sbjct: 960 QMS-----------------------------EKNEATSNCLINGYMGLGNLEQAESLFN 990
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEA----YRLFERMPGKDFVSWTTMITGFSSKGNLE- 282
M +D +SW ++I GY N EA Y++ E D V+ +T+I+ + G LE
Sbjct: 991 QMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEI 1050
Query: 283 -KSIELFNMMPE--KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
K + ++ + D +A++ + E A F + +K N +S++
Sbjct: 1051 GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWNSIIE 1106
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC---GNVVDAYRIFTN-IDER 395
AA + ++ A KM MES + VS+++ C G V + RI+ + ID+
Sbjct: 1107 GLAAHGFAQEALKMFA---KMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY 1163
Query: 396 NIVS----YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-HVGLV 448
+IVS Y M+ F++ GL EAL L M+ E PN + + ++L C H LV
Sbjct: 1164 SIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE---PNAVIWGALLDGCRIHKNLV 1218
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 71/282 (25%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
IT +S L+ ++ M E + + A+ GFV + ++ MLR V P+
Sbjct: 812 ITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSS 871
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T SS++ AS+ + G + AH+ K V IQ +L+ YS G + +A ++F
Sbjct: 872 YTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDE 929
Query: 392 IDERNIVSYNSMISGFAQ-----------------------------NGLG--EEALNLF 420
+ ER+ +++ +M+S + + GLG E+A +LF
Sbjct: 930 MPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLF 989
Query: 421 R-------------------------------KMKDEGLVPNQITFLSVLSACNHVGLVE 449
KM +EG++P+++T +V+SAC H+G++E
Sbjct: 990 NQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE 1049
Query: 450 EG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
G +Y + ++ G + +VD+ + GSL A+
Sbjct: 1050 IGKEVHMYTLQNGFVLDVYIG----SALVDMYSKCGSLERAL 1087
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 22/183 (12%)
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
A ++K ++ D + N ++ + + A T + E N+ YN++ GF
Sbjct: 794 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 853
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE---------GFIYFKSMKTLYNIE 465
+L L+ +M + + P+ T+ S++ A + E GF + ++T
Sbjct: 854 RSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQT----- 908
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
++D G + EA + + M E W ++ A R L++D A A
Sbjct: 909 -------TLIDFYSATGRIREARKVFDEMP-ERDDIAWTTMVSAYRRVLDMDSANSLANQ 960
Query: 526 LME 528
+ E
Sbjct: 961 MSE 963
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 25 EAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN----- 75
EA ++FA M M NAV++ ++ T G+ E +Y +M + S+ SN
Sbjct: 1116 EALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY--SIVSNVEHYG 1173
Query: 76 ALISGYLKVGRCEEAARIFEAM-VEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
++ + K G EA + M E + V WG+++DG ++ A F+K+
Sbjct: 1174 GMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 1227
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 187/631 (29%), Positives = 318/631 (50%), Gaps = 51/631 (8%)
Query: 8 SYNAMITALI--NNNCSIY-EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
S M+ L+ + CS + A ++F +P ++ S+ ++ G G + + + +V +
Sbjct: 96 SLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEI 155
Query: 65 ------PARWRDSVCSNALIS-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
P + S A I + VG A I + V S++ Y K GR
Sbjct: 156 LGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVN-TSLLGMYAKLGR 214
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ ++ ++F+ + +N V+W AM+ G++ + + ++ FL M + N + +A
Sbjct: 215 IGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKA 274
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS- 236
G+ +G ++ + G +I +G ++I M+ + G + E+ VF V+
Sbjct: 275 IGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNL 334
Query: 237 -WNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTT--------------------- 270
WN++ISG+ +G EEA LF RM +D ++ +
Sbjct: 335 PWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMI 394
Query: 271 -------------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
++ ++ G L+ +LF+ E + ++WT +++ + + ++E+A
Sbjct: 395 WKSGSIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALS 454
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F +M +PNQ+T S VL++ A+ +L G Q+H+ K D +++ L+ +Y+
Sbjct: 455 VFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYA 514
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
KCG+V DA ++F ++ + +++S+ +MISG+AQ+G+ ++AL LFRKM+ PN TFL
Sbjct: 515 KCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLC 574
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
+L AC+H GLV+EG YF M+ Y + P EHYAC+VDILGR G L EA I M E
Sbjct: 575 LLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIE 634
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
P VW LLGA R H N+ LAK+AAQ ++ PD V+LS+ Y G G VR
Sbjct: 635 PDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVR 694
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
K + +RK G SWI + K+H F +G +
Sbjct: 695 NMMKSQAMRKETGMSWICIGGKIHKFCSGDQ 725
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 242/492 (49%), Gaps = 55/492 (11%)
Query: 97 MVEKDV-VAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL 155
++EK + V +V Y K AR++FD++P+K+V +WT ++ G + + DG D
Sbjct: 92 LIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDY 151
Query: 156 FLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGR 215
F+ + + + L+ +AC G VH V GF + S++ MY +
Sbjct: 152 FVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAK 211
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD-------FVS- 267
LG + ++ KVF+ + R+ VSWN++ISG+V NG EAY F RM G++ F+S
Sbjct: 212 LGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISV 271
Query: 268 -------------------------------WTTMITGFSSKGNLEKSIELF--NMMPEK 294
T +I F+ G + +S +F N
Sbjct: 272 SKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCG 331
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
++ W A+ISGF + EEA F+ M + +++ + T S L++ A +L Q+H
Sbjct: 332 VNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLH 391
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
+ K VS+ N+L+ Y+KCG + ++F +E N +S+ ++++ ++Q+ E
Sbjct: 392 GMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWE 450
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYAC 473
+AL++F +M++ G PNQ+TF VL++C + +E G ++ + KT + + E +
Sbjct: 451 DALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVE--SV 508
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELE--- 530
++D+ + GS+ +AI + S+ +P W A++ H +AK A + ++E
Sbjct: 509 LIDMYAKCGSVRDAIKVFESLK-DPDVISWTAMISGYAQH---GMAKDALELFRKMELVL 564
Query: 531 --PDSATPYVVL 540
P+SAT +L
Sbjct: 565 PNPNSATFLCLL 576
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 46/259 (17%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
RD + LI Y K G +A ++FE++ + DV++W +M+ GY + G +A E+F KM
Sbjct: 501 RDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKM 560
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+L L NS T L AC EG+
Sbjct: 561 -------------------------ELVLPNP------NSATFLCLLFACSHGGLVDEGL 589
Query: 189 Q-VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK-VFSMMSKRDAVSWNSLISGYVH 246
+ H + R+G +I ++ + GR+G + EA K + M + D W++L+
Sbjct: 590 RYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRV 649
Query: 247 NGEIE----EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDDV 297
+G I+ A ++ P DF + + + GN+E + + NMM ++ +
Sbjct: 650 HGNIQLAKIAAQKVLSYNP-DDFAALVLLSNTYREAGNIEGGLNVRNMMKSQAMRKETGM 708
Query: 298 TWTAI---ISGFVNNEQYE 313
+W I I F + +QY
Sbjct: 709 SWICIGGKIHKFCSGDQYH 727
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 282/538 (52%), Gaps = 64/538 (11%)
Query: 39 VSYAAMITGFVRRGMFYEAEELY--VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEA 96
+++ ++ R E E+++ + D SN+LI Y G A +F+
Sbjct: 88 LTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDE 147
Query: 97 MVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF 156
MV KDVV+W S++ GY + R F+D LF
Sbjct: 148 MVVKDVVSWNSLICGYSQCNR-------------------------------FKDILALF 176
Query: 157 LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
M+ G+ + +T+ + AC R Y + + + + D+ LGN+++ +GR
Sbjct: 177 KLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRR 236
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFS 276
G + A KVF M R+ V+ N++I+ Y +I A ++F+++P KD +SW++MI+G+S
Sbjct: 237 GQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYS 296
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
+ ++E+F +M R V+P+ + ++S
Sbjct: 297 QANHFSDALEIFR-------------------------------QMQRAKVKPDAIVIAS 325
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
V+S+ A L+ G +H +V + N+++D ++NSL+ +Y KCG+ +A ++F + E++
Sbjct: 326 VVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKD 385
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+S+NS+I G A NG +E+LNLF+ M EG PN +TFL VL AC + LVEEG +F+
Sbjct: 386 TLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFE 445
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
SMK LY++EP +HY C+VD+LGRAG L +A+ I M +P P VW LLG+ TH ++
Sbjct: 446 SMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDV 505
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
+A++ + L ELEP ++ Y +LS+ Y+ + + VR +RKSPGCS +
Sbjct: 506 AIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAV 563
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 108/202 (53%), Gaps = 1/202 (0%)
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
++F+ + W +I G ++ +A ++ + + P+ LT +L A A
Sbjct: 42 KVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARIN 101
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
LN+G Q+H H+ K+ + SD+ + NSL+ LY+ CGN+ A +F + +++VS+NS+I
Sbjct: 102 ALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLIC 161
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
G++Q ++ L LF+ M++EG+ +++T + V+SAC +G + ++ Y IE
Sbjct: 162 GYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIED-YCIE 220
Query: 466 PGPEHYACMVDILGRAGSLAEA 487
+VD GR G L A
Sbjct: 221 VDVYLGNTLVDYFGRRGQLQSA 242
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 141/306 (46%), Gaps = 12/306 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + NAMI A I A +IF +P ++ +S+++MI+G+ + F +A E+
Sbjct: 249 MKVRNIVTMNAMIAAYAKGQ-DIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEI 307
Query: 61 YVNMP-ARWR-DSVCSNALISGYLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCK 114
+ M A+ + D++ +++S +G + + E + ++ D + S++D Y K
Sbjct: 308 FRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMK 367
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G EA ++F +M EK+ ++W +++ G ++ +LF +M G N +T +
Sbjct: 368 CGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGV 427
Query: 175 FEACGRFFRYREGVQVHGLVSR-FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KR 232
AC EG+ + R + + + ++ + GR G +++A + + M
Sbjct: 428 LIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDP 487
Query: 233 DAVSWNSLISGYVHNGEI---EEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFN 289
D V W L+ +G++ E + + + ++T + ++S +++ +
Sbjct: 488 DPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQ 547
Query: 290 MMPEKD 295
M + D
Sbjct: 548 CMADTD 553
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
++V A+++F I+ +N +I G AQ+ +A+ ++K + G+VP+ +TF +L
Sbjct: 36 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILK 95
Query: 441 ACNHVGLVEEG 451
AC + + EG
Sbjct: 96 ACARINALNEG 106
>gi|345505214|gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
Length = 612
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 281/509 (55%), Gaps = 43/509 (8%)
Query: 83 KVGRCEEAARIFEAMVE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
++G +E ++ +++ D+ ++ Y K G + AR++FD+MP+++ V++ +
Sbjct: 140 RLGFVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGCLGFARQVFDRMPQRDSVSYNS 199
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+DGY+K E +LF GL+ R
Sbjct: 200 MIDGYLKCGLVESAGELF-----------------------------------GLMPRE- 223
Query: 199 FDYDIILGNSIITMYG-RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
++I NS+I Y R ++ A K+F M ++D +SWNS+I GYV +G IE+A LF
Sbjct: 224 -KRNLITWNSMIGGYAQRADGVNVAAKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLF 282
Query: 258 ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
+ MP +D V+W MI G+ G + ++ LF+ MP +D V + +++SG V N + EA
Sbjct: 283 DVMPRRDVVTWAIMIDGYGKLGLVHEAKTLFDQMPHRDVVVYNSMMSGXVQNRYHMEALE 342
Query: 318 WFIEMLRKD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
F M ++ + P++ +L VLSA A L++ +H ++V+ S + +L+ +Y
Sbjct: 343 VFNHMEKESHLTPDETSLVIVLSAXAQLGRLSKAIDMHLYIVEKQFPSSGKLGVALIDMY 402
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
SKCG++ A R+F I+ ++I +N+MI G A +GLGE A ++ +++ + P+ ITF+
Sbjct: 403 SKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFV 462
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
VL+AC+H GLV+EG + F+ M+ + IEP +HY CMVDIL R+GS+ A +LI M
Sbjct: 463 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIELAKNLIEGMPI 522
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
EP +W L A H + +L A+HL+ + + YV+LS++Y+ G +D RV
Sbjct: 523 EPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASNGMWKDVRRV 582
Query: 557 RMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
R K K I K PGCSWI L +VH FL
Sbjct: 583 RTMMKEKNIEKIPGCSWIELDGRVHEFLC 611
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 199/411 (48%), Gaps = 22/411 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYE-AFEIFATMPM--RNAVSYAAMITGFVRRGMFYE- 56
M R S SYN+MI + C + E A E+F MP RN +++ +MI G+ +R
Sbjct: 189 MPQRDSVSYNSMIDGYLK--CGLVESAGELFGLMPREKRNLITWNSMIGGYAQRADGVNV 246
Query: 57 AEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
A +L+ MP + D + N++I GY+K GR E+A +F+ M +DVV W M+DGY K G
Sbjct: 247 AAKLFDEMPEK--DLISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLG 304
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILF 175
V EA+ +FD+MP ++VV + +M+ G ++ + ++F M + + + +L I+
Sbjct: 305 LVHEAKTLFDQMPHRDVVVYNSMMSGXVQNRYHMEALEVFNHMEKESHLTPDETSLVIVL 364
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
A + R + + +H + F LG ++I MY + G + A +VF + +
Sbjct: 365 SAXAQLGRLSKAIDMHLYIVEKQFPSSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSID 424
Query: 236 SWNSLISGYVHNGEIEEAYRLF----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
WN++I G +G E A+ + R D +++ ++ S G +++ + F +M
Sbjct: 425 HWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELM 484
Query: 292 PEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
K + + ++ + E A + IE + + PN + + L+A +
Sbjct: 485 RRKHKIEPRLQHYGCMVDILARSGSIELA-KNLIEGM--PIEPNDVIWRTFLTACSHHKE 541
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
G + H++ + + S L ++Y+ G D R+ T + E+NI
Sbjct: 542 FETGELVAKHLI-LQAGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNI 591
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 125/283 (44%), Gaps = 43/283 (15%)
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+D W +I + +A ML V ++ + S L A + + +G+Q+
Sbjct: 91 EDPFLWNVVIKSHSHGVDPRKALFLLCLMLENGVPVDKFSFSLALKACSRLGFVKEGTQV 150
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H ++K SD+ +QN L+ LY KCG + A ++F + +R+ VSYNSMI G+ + GL
Sbjct: 151 HGFLIKTGTWSDLFLQNCLIGLYIKCGCLGFARQVFDRMPQRDSVSYNSMIDGYLKCGLV 210
Query: 414 EEALNLFRKMKDEGLVP----NQITFLSVLSACNHVG------------LVEEGFIYFKS 457
E A LF GL+P N IT+ S++ + E+ I + S
Sbjct: 211 ESAGELF------GLMPREKRNLITWNSMIGGYAQRADGVNVAAKLFDEMPEKDLISWNS 264
Query: 458 M-------------KTLYNIEPGPE--HYACMVDILGRAGSLAEAIDLINSMTFEPPPGV 502
M K L+++ P + +A M+D G+ G + EA L + M V
Sbjct: 265 MIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHEAKTLFDQMPHRDVV-V 323
Query: 503 WGALLGAGRTHLNLDLAKLAAQHLME----LEPDSATPYVVLS 541
+ +++ +G + L + ME L PD + +VLS
Sbjct: 324 YNSMM-SGXVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLS 365
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/495 (34%), Positives = 272/495 (54%), Gaps = 35/495 (7%)
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
+K V + ++ + +V+WT+ + + D + F MR G+ N IT
Sbjct: 14 RKNNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFIS 73
Query: 174 LFEACGRFFRYREGVQ--VHGLVSRFGFDYD-IILGNSIITMYGRLGFMDEANKVFSMMS 230
L ACG F E + +HG + G D +++G +I+ MY S
Sbjct: 74 LLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMY----------------S 117
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNM 290
KR G + +A +F+ M K+ V+W TMI G+ G ++ ++++F+
Sbjct: 118 KR---------------GHVRKARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKVFDE 162
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MPE+D ++WTA+I+GFV +EEA WF EM V P+ + + + L+A L+ G
Sbjct: 163 MPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAALAACTNLGALSFG 222
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
H +VV + ++V + NSL+ LY +CG V A ++F +++R +VS+NS+I GFA N
Sbjct: 223 LWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRTVVSWNSVIVGFAAN 282
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
G E+L FRKM++EG P+ +TF L+AC+HVGLVEEGF YF+ MKT Y I P EH
Sbjct: 283 GNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGFQYFQMMKTDYRISPRIEH 342
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD-LAKLAAQHLMEL 529
+ C+VD+ RAG L +AI ++ SM +P V G+LL A R H N LA+ +H+ +L
Sbjct: 343 FGCLVDLYSRAGRLEDAIKVVESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKHISDL 402
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ + YV+LS++Y+ GK +++R K K ++K PG S I + D H+F+AG +
Sbjct: 403 DVKGHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYSSIEIDDYTHVFMAGDNA 462
Query: 590 CLDLKEIEVTLQTIS 604
++ I L+ IS
Sbjct: 463 HVETAYIREVLEVIS 477
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 144/274 (52%), Gaps = 12/274 (4%)
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
A++ Y K G +A +F+ M +K+ V W +M+DGY + G+V A ++FD+MPE+++++
Sbjct: 111 AILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLIS 170
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WTAM+ G++K E+ F M+ G+ + + + AC G+ H V
Sbjct: 171 WTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVV 230
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
F ++ + NS+I +Y R G ++ A +VF M KR VSWNS+I G+ NG E+
Sbjct: 231 SQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRTVVSWNSVIVGFAANGNANESLV 290
Query: 256 LFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGF 306
F +M + F V++T +T S G +E+ + F MM ++ + ++ +
Sbjct: 291 YFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLY 350
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+ E+A + M ++PN++ + S+L+A
Sbjct: 351 SRAGRLEDAIKVVESM---PMKPNEVVIGSLLAA 381
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 9/256 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M D+ S ++N MI + N + A ++F MP R+ +S+ AMITGFV++G EA
Sbjct: 132 MEDKNSVTWNTMIDGYMRNG-QVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAW 190
Query: 61 YVNMPARW--RDSVCSNALISGYLKVGRCEEAARIFEAMVEKD----VVAWGSMVDGYCK 114
+ M D V A ++ +G +V +D V S++D YC+
Sbjct: 191 FREMQISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCR 250
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G V AR++FD M ++ VV+W +++ G+ + F M+ G +++T T
Sbjct: 251 CGCVEFARQVFDTMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGA 310
Query: 175 FEACGRFFRYREGVQVHGLV-SRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKR 232
AC EG Q ++ + + I ++ +Y R G +++A KV SM K
Sbjct: 311 LTACSHVGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKP 370
Query: 233 DAVSWNSLISGYVHNG 248
+ V SL++ ++G
Sbjct: 371 NEVVIGSLLAACRNHG 386
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 187/606 (30%), Positives = 310/606 (51%), Gaps = 55/606 (9%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM-----------PARWRD 70
S+ +A +F MP R+ V++ A+I+G V G E V M +R +
Sbjct: 160 SVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTME 219
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
S + G L VG C + +A V S+ Y K +AR +F ++PE
Sbjct: 220 SGLEACGVLGELSVGTCLHGFGV-KAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPE 278
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K++V+WT+++ Y + E +LFL M G+ + + ++ L G + R G
Sbjct: 279 KDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTF 338
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG-- 248
H + R F +++GN++I+MY + +D A VF M+ +RD SW+S++ Y G
Sbjct: 339 HAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLD 398
Query: 249 -EIEEAYRLFE---------------------------------------RMPGKDFVSW 268
+ E YR + + G++
Sbjct: 399 LKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVA 458
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+I+ + GN + + ++F M+ KD VTW+A+IS + + ++A + +ML + V+
Sbjct: 459 NALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVK 518
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN TL SV+S+ A A L G IH+HV + +E D+SI +LV +Y KCG + A ++
Sbjct: 519 PNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKM 578
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F ++ ER++V++N MISG+ +G +AL LF M+ + PN +TFL++LSAC H GLV
Sbjct: 579 FDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLV 638
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
++G F M+ Y++EP +HYACMVD+LG++G L EA D++++M EP G+WG LLG
Sbjct: 639 DKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLG 697
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A + H N ++ A+ +P++ Y+++S+ Y K + ++R K + KS
Sbjct: 698 ACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKS 757
Query: 569 PGCSWI 574
G S I
Sbjct: 758 IGWSTI 763
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 225/479 (46%), Gaps = 50/479 (10%)
Query: 65 PARWRDSVCSNALIS-GYLKVGRCEEAARIFEAMVEKD--VVAWGSMVDGYCKKGRVIEA 121
P+R+ + ++A G L VG A + ++E D V S+V Y + G V +A
Sbjct: 105 PSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDA 164
Query: 122 REIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR----GGMAFNSITLTILFEA 177
+FD+MPE++VVAWTA++ G + +G + M R GG NS T+ EA
Sbjct: 165 VRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEA 224
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
CG G +HG + G + + +S+ +MY + ++A +F + ++D VSW
Sbjct: 225 CGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSW 284
Query: 238 NSLISGYVHNGEIEEAYRLFERMP--------------------------GKDFVS---- 267
SLI Y G E+A LF M GK F +
Sbjct: 285 TSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVR 344
Query: 268 ---------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+I+ ++ ++ + +F M+ ++D +W++++ + +
Sbjct: 345 RNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLEL 404
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQ---GSQIHAHVVKMNMESDVSIQNSLVSL 375
+ EM +D + +S++S ++ + L + G H + +K + S+ N+L+S+
Sbjct: 405 YREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISM 464
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
Y +CGN A +IF + +++V+++++IS ++ G ++AL L+ +M EG+ PN T
Sbjct: 465 YGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATL 524
Query: 436 LSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+SV+S+C ++ +E G + +K + +E +VD+ + G L A + +SM
Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDV-GLECDLSICTALVDMYMKCGQLGIARKMFDSM 582
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 148/342 (43%), Gaps = 46/342 (13%)
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
P + W +++ + F MR G + T ++ A G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 189 QVHGLVSRFGF---DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
VH RFG D + + +S++ MY R G + +A ++F M +RD V+W ++ISG V
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 246 HNGEIEEAYRLFERM----------PGKDF-------------VSWTTMITGFSSKGNL- 281
NG+ E RM P +S T + GF K +
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVG 247
Query: 282 -------------------EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
E + LF +PEKD V+WT++I + E+A F+ M
Sbjct: 248 HCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM 307
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
++P+++ +S +L+ A + G HA +V+ N V I N+L+S+Y+KC V
Sbjct: 308 EESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQV 367
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
A +F + +R+ S++SM+ + + GL + L L+R+M+
Sbjct: 368 DIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQ 409
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
P DF + +++ +SS G + F P D W +++ +
Sbjct: 39 PRPDFAA--KLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASDFASTLSAHR 96
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM---ESDVSIQNSLVSLYS 377
M RP++ T V SA+A L G+ +HA+ V+ + + V++ +SLV +Y+
Sbjct: 97 RMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYA 156
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN----LFRKMKDEGLVPNQI 433
+CG+V DA R+F + ER++V++ ++ISG NG E L+ + R D G PN
Sbjct: 157 RCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSR 216
Query: 434 TFLSVLSACNHVGLVEEG 451
T S L AC +G + G
Sbjct: 217 TMESGLEACGVLGELSVG 234
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 171/480 (35%), Positives = 271/480 (56%), Gaps = 37/480 (7%)
Query: 121 AREIFD----KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
A++IF+ + PE V W + + + D D LF +R+ + ++ T + +
Sbjct: 79 AQQIFECVEKQKPETFV--WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLR 136
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
AC G +HG+V + GF ++ L N I+ +Y G
Sbjct: 137 ACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCG------------------- 177
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
E+ EA LFE+MP +D V+W MI +G+ E + +LF+ MPE++
Sbjct: 178 ------------EMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNV 225
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+WT++I+G+V + +EA F +M V+ N++T+ +VL+A A L+ G +IH +
Sbjct: 226 RSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEY 285
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+ + +V I N+L+ +Y KCG + +A ++F ++ER +VS+++MI G A +G EEA
Sbjct: 286 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEA 345
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L LF M G+ PN +TF+ +L AC+H+GL+ EG +F SM Y I P EHY CMVD
Sbjct: 346 LRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVD 405
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+L RAG L EA + I +M +P VWGALLGA R H N+++A+ A +HL+EL+P +
Sbjct: 406 LLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY 465
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
YVVLS++Y+ G+ D RVR K ++++K+PG S I + VH F+AG +S D ++I
Sbjct: 466 YVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQI 525
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 178/391 (45%), Gaps = 35/391 (8%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N ++ Y G EA +FE M ++DVV W M+ K+G A ++F +MPE+NV
Sbjct: 166 QNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNV 225
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+WT+M+ GY++ ++ LF M G+ N +T+ + AC G+++H
Sbjct: 226 RSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEY 285
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+R GF ++ + N++I MY + G ++EA KVF M +R VSW+++I G +G EEA
Sbjct: 286 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEA 345
Query: 254 YRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIIS 304
RLF M + V++ ++ S G + + F M + + ++
Sbjct: 346 LRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVD 405
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
EA + + M ++PN + ++L A + + H+++++ +
Sbjct: 406 LLSRAGLLHEAHEFILNM---PMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLN 462
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI--------VSYNSMISGFAQNGLGEEA 416
D L ++Y++ G D R+ + +R + ++ + ++ F GEE+
Sbjct: 463 D-GYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVA---GEES 518
Query: 417 L-----------NLFRKMKDEGLVPNQITFL 436
L +M+ +G VPN L
Sbjct: 519 HPDTEQIFQRWEELLEEMRLKGYVPNTSVVL 549
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 32/352 (9%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R ++N MI LI A+++F+ MP RN S+ +MI G+V+ G EA L
Sbjct: 189 MPQRDVVTWNIMIAQLIKQG-DHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHL 247
Query: 61 YVNMPARWR--DSVCSNALISGYLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCK 114
+ M + V A+++ +G + RI E +++V +++D Y K
Sbjct: 248 FAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVK 307
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + EA ++F++M E+ VV+W+AM+ G E+ LF M + G+ N +T L
Sbjct: 308 CGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGL 367
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILG----NSIITMYGRLGFMDEANK-VFSMM 229
AC EG + ++R DY II ++ + R G + EA++ + +M
Sbjct: 368 LHACSHMGLISEGRRFFASMTR---DYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 424
Query: 230 SKRDAVSWNSLISGY-VH-NGEI-EEAYR-LFERMPGKDFVSWTTMITGFSSKGNLEKSI 285
K + V W +L+ VH N E+ EEA + L E P D + + ++ G E +
Sbjct: 425 MKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY-YVVLSNIYAEAGRWEDTA 483
Query: 286 ELFNMMPEKD--------DVTWTAIISGFVNNEQ----YEEAFRWFIEMLRK 325
+ M ++ +T ++ FV E+ E+ F+ + E+L +
Sbjct: 484 RVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEE 535
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 259/449 (57%), Gaps = 31/449 (6%)
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
+T + +AC G+ VH V + GF+ D + NS+I +Y + A ++FS+
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF 288
S RD VSWN++I GYV GE+ +F+RM +D +SW T+I G++ G ++++ LF
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLF 120
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD---------------------- 326
+ MPE++ V+W +++SGFV EEAF F EM +D
Sbjct: 121 DEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALA 180
Query: 327 ---------VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
V+P + T+ S+LSA A L++G +H ++ +E + + +LV +Y+
Sbjct: 181 LFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYA 240
Query: 378 KCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
KCG + A ++F ++ ++++++N++I+G A +G +EA LF++MK+ + PN ITF++
Sbjct: 241 KCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVA 300
Query: 438 VLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFE 497
+LSAC+H G+V+EG M + Y IEP EHY C++D+L RAG L EA++LI +M E
Sbjct: 301 MLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPME 360
Query: 498 PPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
P P GALLG R H N +L ++ + L+ L+P + Y++LS++Y+ K D +VR
Sbjct: 361 PNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVR 420
Query: 558 MKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
K+ I K PG S I LK VH F+AG
Sbjct: 421 NLMKVNGISKVPGVSVIELKGMVHRFVAG 449
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 157/286 (54%), Gaps = 7/286 (2%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N++I L N + A ++F+ R+ VS+ AMI G+V+RG ++ M R
Sbjct: 39 NSLIH-LYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCR-- 95
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D + N +I+GY VG+ +EA R+F+ M E+++V+W SM+ G+ K G V EA +F +MP
Sbjct: 96 DVISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMP 155
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
++VV+W +M+ Y + + LF MR G+ T+ L AC +G+
Sbjct: 156 CRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLH 215
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H ++ + + I+G +++ MY + G + A +VF+ M +D ++WN++I+G +G
Sbjct: 216 LHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGH 275
Query: 250 IEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
++EA +LF+ M +++ M++ S G +++ +L + M
Sbjct: 276 VKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 321
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 278/528 (52%), Gaps = 35/528 (6%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
A++ +A + +D+ ++ + + A +F+ +P NV + +++ +
Sbjct: 42 AQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNTSHP 101
Query: 151 D-GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
F+ F M++ G+ ++ T L +AC +H V +FGF DI + NS+
Sbjct: 102 SLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSL 161
Query: 210 ITMYGRLGF---------------------------------MDEANKVFSMMSKRDAVS 236
I Y R G ++ A K+F M +RD VS
Sbjct: 162 IDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDMVS 221
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
WN+++ GY GE++ A+ LFERMP ++ VSW+TM+ G+S G+++ + LF+ P K+
Sbjct: 222 WNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNV 281
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
V WT II+G+ EA + +M +RP+ L S+L+A A + L G +IHA
Sbjct: 282 VLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHAS 341
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEE 415
+ + + N+ + +Y+KCG + A+ +F+ + ++++VS+NSMI GFA +G GE+
Sbjct: 342 MRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEK 401
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
AL LF +M EG P+ TF+ +L AC H GLV EG YF SM+ +Y I P EHY CM+
Sbjct: 402 ALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMM 461
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D+LGR G L EA L+ SM EP + G LL A R H ++D A+ + L ++EP
Sbjct: 462 DLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHNDVDFARAVCEQLFKVEPTDPG 521
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
Y +LS++Y+ G + VR++ +K G S I ++++VH F
Sbjct: 522 NYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEVEEEVHEF 569
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 179/366 (48%), Gaps = 16/366 (4%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A +F M R+ V++ +MI G VR G A +L+ MP R D V N ++ GY K G
Sbjct: 176 AMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPER--DMVSWNTMLDGYAKAG 233
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
+ A +FE M ++++V+W +MV GY K G + AR +FD+ P KNVV WT ++ GY +
Sbjct: 234 EMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAE 293
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIIL 205
+ +L+ M G+ + L + AC G ++H + R+ F +
Sbjct: 294 KGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKV 353
Query: 206 GNSIITMYGRLGFMDEANKVFS-MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
N+ I MY + G +D A VFS MM+K+D VSWNS+I G+ +G E+A LF RM +
Sbjct: 354 LNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEG 413
Query: 265 F----VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEA 315
F ++ ++ + G + + + F M + + + ++ +EA
Sbjct: 414 FEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEA 473
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
F M + PN + L ++L+A ++ + + K+ +D + L ++
Sbjct: 474 FTLLRSM---PMEPNAIILGTLLNACRMHNDVDFARAVCEQLFKVE-PTDPGNYSLLSNI 529
Query: 376 YSKCGN 381
Y++ G+
Sbjct: 530 YAQAGD 535
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
Q L L + L+ +QIHA V+K N+ D+ + L++ +S C ++ A +F
Sbjct: 18 QRLLEEKLCDLHKCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFN 77
Query: 391 NIDERNIVSYNSMISGFAQNGLGEE-ALNLFRKMKDEGLVPNQITFLSVLSACN 443
++ N+ YNS+I A N N F +M+ GL P+ T+ +L AC
Sbjct: 78 HVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACT 131
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 197/638 (30%), Positives = 326/638 (51%), Gaps = 54/638 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ EA +F+ M + +S+ +MI ++R G+ E+ + M R + S L +
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWM-FRVHKEINSTTLSTML 239
Query: 82 LKVGRCEEA--ARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
G + R ++V K +V A +++ Y GR +A +F M EK+++
Sbjct: 240 AGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMI 299
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSM---RRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
+W +M+ Y + D L +M RRG N +T T AC EG +H
Sbjct: 300 SWNSMMACYAQDGNCLDALKLLATMFYMRRGA---NYVTFTSALAACSDPEFATEGKILH 356
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
LV G ++I+GN+++T+Y + G M EA KVF M KRD V+WN+LI G+ + E +
Sbjct: 357 ALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPD 416
Query: 252 EAYRLFERM------------------------------PGKDFVSWT----------TM 271
EA + F+ M P F+ T ++
Sbjct: 417 EALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSL 476
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
IT ++ G+L S +F+ + K+ W A+++ ++ EEA ++ +EM R V ++
Sbjct: 477 ITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDE 536
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ S L+A+A A L +G Q+H VK+ +S+ + ++ + +Y KCG + D RI
Sbjct: 537 FSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPR 596
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
R+ +S+N + S F+++G E+A F +M + G+ P+ +TF+S+LSAC+H G+VEEG
Sbjct: 597 PINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEG 656
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
Y+ SM + I H C++D+LGR+G AEA I M P VW +LL A +
Sbjct: 657 LAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACK 716
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
TH NL+L + A ++L++L+P + YV+ S++ + GK D ++R + L +I+K P C
Sbjct: 717 THGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPAC 776
Query: 572 SWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
SW+ LK+K+ LF G S EI L+ + K KE
Sbjct: 777 SWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKE 814
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 218/448 (48%), Gaps = 54/448 (12%)
Query: 45 ITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCE-------EAARIFEAM 97
++GFVR G + E+ + M RD + I+ V CE E ++ +
Sbjct: 1 MSGFVRAGSYRESMRFFNEM----RDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFI 56
Query: 98 VE----KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF 153
V+ DV S+V Y G +A ++F +M KNVV+WTA++ Y+
Sbjct: 57 VKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVM 116
Query: 154 DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY 213
+++ MR GM+ N T++ + C G QV G V ++G + ++ + NS+I+M+
Sbjct: 117 NIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMF 176
Query: 214 GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------- 260
G G ++EA VFS M + D +SWNS+I+ Y+ NG +E+ R F M
Sbjct: 177 GYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLS 236
Query: 261 ------PGKDFVSW--------------------TTMITGFSSKGNLEKSIELFNMMPEK 294
D + W T+IT +S G E + +F M EK
Sbjct: 237 TMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEK 296
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D ++W ++++ + + +A + M N +T +S L+A + +G +H
Sbjct: 297 DMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILH 356
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
A V+ + + +V + N+LV+LY+K G +++A ++F + +R+ V++N++I G A + +
Sbjct: 357 ALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPD 416
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSAC 442
EAL F+ M++EG+ N IT +VL AC
Sbjct: 417 EALKAFKLMREEGVPINYITISNVLGAC 444
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 143/572 (25%), Positives = 266/572 (46%), Gaps = 64/572 (11%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+A ++F M +N VS+ A++ +V G +Y M R C++ +S +
Sbjct: 83 DAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRM--RSEGMSCNDNTMSSVIST 140
Query: 85 GRCEE--------AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
E + + +E +V S++ + G V EA +F M E + ++W
Sbjct: 141 CVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISW 200
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+M+ Y++ ++ F M R NS TL+ + CG + G +H LV +
Sbjct: 201 NSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLK 260
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
FG++ ++ N++ITMY G ++A VF M ++D +SWNS+++ Y +G +A +L
Sbjct: 261 FGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKL 320
Query: 257 FERM----PGKDFVSWTT-----------------------------------MITGFSS 277
M G ++V++T+ ++T ++
Sbjct: 321 LATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAK 380
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
G + ++ ++F MP++D VTW A+I G ++E+ +EA + F M + V N +T+S+V
Sbjct: 381 SGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNV 440
Query: 338 LSAS-AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
L A A L G IHA ++ +SD +QNSL+++Y+KCG++ + IF + +N
Sbjct: 441 LGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKN 500
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
++N+M++ A +G EEAL +M+ G+ ++ +F L+A + ++EEG
Sbjct: 501 ASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEG-QQLH 559
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPP-----GVWGALLGAGR 511
+ + P + +D+ G+ G + + + +I P P W L +
Sbjct: 560 GLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRII------PRPINRSRLSWNILTSSFS 613
Query: 512 THLNLDLAKLAAQHLMEL--EPDSATPYVVLS 541
H + AK ++ L +PD T +LS
Sbjct: 614 RHGFFEKAKETFHEMINLGVKPDHVTFVSLLS 645
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 100/182 (54%)
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
D T+++ + + G ++++F M K+ V+WTA++ +V+ + + M
Sbjct: 64 DVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMR 123
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ + N T+SSV+S + G Q+ HV+K +E++VS+ NSL+S++ G+V
Sbjct: 124 SEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVE 183
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
+A +F+ +DE + +S+NSMI+ + +NGL +E+L F M N T ++L+ C
Sbjct: 184 EACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCG 243
Query: 444 HV 445
V
Sbjct: 244 SV 245
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 189/610 (30%), Positives = 315/610 (51%), Gaps = 51/610 (8%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
+A +F MP R+ VS+ ++++ F+ GMF++A V+M R + +L+S
Sbjct: 172 DARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSM-MRSGFPLNVASLVSVVPAC 230
Query: 85 GRCEEA-------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
G +E A + + V ++VD Y K G V + ++FD M E+N V+W
Sbjct: 231 GTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWN 290
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
+ + ++ + D +F M + SITL+ L A + G +VHG +
Sbjct: 291 SAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKR 350
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
D DI + NS++ MY + G +++A+ +F M R+ VSWN++I+ V NG EA+RL
Sbjct: 351 AMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLV 410
Query: 258 ERMP--------------------------GKDFVSWT-------------TMITGFSSK 278
M GK +W+ +I +S
Sbjct: 411 TDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKC 470
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G L + +F EKDDV++ +I G+ + E+ F +M + + ++ L
Sbjct: 471 GQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGAL 529
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA + G +IH +V+ + + NSL+ LY+K G +V A +IF I ++++
Sbjct: 530 SACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVA 589
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
S+N+MI G+ +G + A LF MK +GL + +++++VL+AC+H GLV++G YF M
Sbjct: 590 SWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQM 649
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
NIEP HYACMVD+LGRAG L++ ++I M F VWGALLGA R H N++L
Sbjct: 650 -VAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIEL 708
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
A+ AA+HL EL+P+ + Y ++ ++Y+ G+ + N++R K ++++K+P SW+ +D
Sbjct: 709 AQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQDQD 768
Query: 579 --KVHLFLAG 586
K+ FL G
Sbjct: 769 GNKLQAFLVG 778
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 232/459 (50%), Gaps = 44/459 (9%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV ++V Y G+ +AR +FD+MPE++VV+W ++V ++ F D +SM
Sbjct: 153 DVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMM 212
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
R G N +L + ACG + G+ +H L + G + + L N+++ MYG+ G ++
Sbjct: 213 RSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVE 272
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER------MPGK----------- 263
+ +VF M +++ VSWNS I +++ G + R+F + MPG
Sbjct: 273 ASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALV 332
Query: 264 ----------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
D +++ ++ G+LEK+ +F M +++ V+W A
Sbjct: 333 ELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNA 392
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+I+ V N EAFR +M + PN +TL +VL A A A+L G QIHA ++
Sbjct: 393 MIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRG 452
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
+ D+ I N+L+ +YSKCG + A IF E++ VSYN++I G++Q+ E+L LF+
Sbjct: 453 LMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFK 511
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYACMVDILGR 480
+M+ G+ + ++F+ LSAC ++ + + G I+ ++ L + P + ++D+ +
Sbjct: 512 QMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN--SLLDLYTK 569
Query: 481 AGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
G L A + N +T + W ++ H +D+A
Sbjct: 570 GGMLVTASKIFNKIT-KKDVASWNTMILGYGMHGQIDIA 607
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 152/305 (49%), Gaps = 39/305 (12%)
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+G+++H R G D+ GN+++ Y G +A +VF M +RD VSWNSL+S ++
Sbjct: 137 KGLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFL 196
Query: 246 HNGEIEEAYRLFERMPGKDF--------------------------------VSWTTMIT 273
NG +A R M F V TM+
Sbjct: 197 VNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVN 256
Query: 274 -------GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+ G++E S+++F+ M E+++V+W + I F+N Y + R F +M +
Sbjct: 257 LANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHN 316
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
V P +TLSS+L A + + G ++H + +K M+ D+ + NSLV +Y+K G++ A
Sbjct: 317 VMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKAS 376
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
IF + +RN+VS+N+MI+ QNG EA L M+ G PN IT ++VL AC +
Sbjct: 377 TIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMA 436
Query: 447 LVEEG 451
++ G
Sbjct: 437 SLKMG 441
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 194/428 (45%), Gaps = 58/428 (13%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ +A IF M RN VS+ AMI V+ G EA L +M + C N++
Sbjct: 371 SLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQ---KSGECPNSIT--- 424
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWG-------------SMVDGYCKKGRVIEAREIFDKM 128
V AR+ + K + AW +++D Y K G++ AR IF++
Sbjct: 425 -LVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER- 482
Query: 129 PEKNVVAWTAMVDGYMKVD-CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
EK+ V++ ++ GY + CFE LF MR G+ +++++ AC ++ G
Sbjct: 483 SEKDDVSYNTLILGYSQSPWCFES-LLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHG 541
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
++H ++ R L NS++ +Y + G + A+K+F+ ++K+D SWN++I GY +
Sbjct: 542 KEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMH 601
Query: 248 GEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
G+I+ A+ LFE M G + D V++ A+++
Sbjct: 602 GQIDIAFELFELMKGDGL---------------------------DYDHVSYIAVLAACS 634
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
+ ++ ++F +M+ +++ P Q+ + ++ L++ ++I + M ++
Sbjct: 635 HGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEI---IRDMPFPANSD 691
Query: 368 IQNSLVSLYSKCGNVV----DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ +L+ GN+ A +F + + Y MI+ +A+ G EA + + M
Sbjct: 692 VWGALLGACRIHGNIELAQWAAEHLF-ELKPEHSGYYTLMINMYAETGRWNEANKIRKLM 750
Query: 424 KDEGLVPN 431
K + N
Sbjct: 751 KSRKVQKN 758
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL--NQGSQIHAHVVKMNMESDVSIQNS 371
EA R + MLR VRP+ T L A+AA ++G ++HA ++ +DV N+
Sbjct: 100 EALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNT 159
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
LV+ Y+ CG DA R+F + ER++VS+NS++S F NG+ +A M G N
Sbjct: 160 LVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLN 219
Query: 432 QITFLSVLSACN-----HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+ +SV+ AC GL + T+ N+ +VD+ G+ G +
Sbjct: 220 VASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANA------LVDMYGKFGDVEA 273
Query: 487 AIDLINSMTFEPPPGVWGALLG 508
++ + + M E W + +G
Sbjct: 274 SMQVFDGM-LEQNEVSWNSAIG 294
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 280/504 (55%), Gaps = 35/504 (6%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F+++ E NV +++ + F +F M+R G+ ++ T L +AC
Sbjct: 70 ALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD--EANKVFSMMSKRDAVSWN 238
+H + + G DI + N++I Y R G + +A K+F MS+RD VSWN
Sbjct: 130 LSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----- 293
S++ G V GE+ +A +LF+ MP +D +SW TM+ G++ + ++ ELF MPE
Sbjct: 190 SMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVS 249
Query: 294 ----------------------------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
K+ VTWT II+G+ +EA + +M+
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVAS 309
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
+R + S+L+A A + L+ G + H+ + K N+ S+ S+ N+L+ +Y+KCG++ A
Sbjct: 310 GLRFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKA 369
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+ +F ++ ++++VS+N+M+ G +G G+EA+ LF +M+ EG+ P+++TF++VL +CNH
Sbjct: 370 FDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHA 429
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GL++EG YF SM+ +Y++ P EHY C+VD+LGR G L EAI ++ +M EP +WGA
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA R H +D+AK +L++L+P Y +LS++Y+ +R K K +
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 566 RKSPGCSWIILKDKVHLFLAGRKS 589
K G S + L+D +H F KS
Sbjct: 550 EKPSGASSVELEDGIHEFTVFDKS 573
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 176/372 (47%), Gaps = 17/372 (4%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
RD+V N+++ G +K G +A ++F+ M ++D+++W +M+DGY + + A E+F+KM
Sbjct: 183 RDTVSWNSMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKM 242
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
PE+N V+W+ MV GY K E +F M A N +T TI+ +E
Sbjct: 243 PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPFP--AKNVVTWTIIIAGYAEKGLLKEAD 300
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK----RDAVSWNSLISGY 244
++ + G +D SI+ G + + S++ K +A N+L+ Y
Sbjct: 301 KLVDQMVASGLRFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMY 360
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWT 300
G +++A+ +F MP KD VSW TM+ G G+ +++IELF+ M ++ D VT+
Sbjct: 361 AKCGSLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFI 420
Query: 301 AIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
A++ + +E +F M + D+ P ++ L + ++ V
Sbjct: 421 AVLCSCNHAGLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKV---VQT 477
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN---IDERNIVSYNSMISGFAQNGLGEEA 416
M ME +V I +L+ V A + N +D + +Y + + +A E
Sbjct: 478 MPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGV 537
Query: 417 LNLFRKMKDEGL 428
++ KMK G+
Sbjct: 538 ADIRSKMKSMGV 549
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 174/372 (46%), Gaps = 48/372 (12%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M++R + S+N+M+ L+ + +A ++F MP R+ +S+ M+ G+ R A EL
Sbjct: 180 MSERDTVSWNSMLGGLVKAG-ELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFEL 238
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM--VEKDVVAWGSMVDGYCKKGRV 118
+ MP R++V + ++ GY K G E A +F+ M K+VV W ++ GY +KG +
Sbjct: 239 FEKMPE--RNTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLL 296
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EA ++ D+M + FD ++ S L++
Sbjct: 297 KEADKLVDQMVASGL------------------RFDAAAAISILAACAESGLLSL----- 333
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G++ H ++ + + + + N+++ MY + G + +A VF+ M K+D VSWN
Sbjct: 334 --------GMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWN 385
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+++ G +G +EA LF RM + D V++ ++ + G +++ I+ F M +
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
Query: 295 DDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
D+ + ++ + +EA + M + PN + ++L A ++
Sbjct: 446 YDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTM---PMEPNVVIWGALLGACRMHNEVDI 502
Query: 350 GSQIHAHVVKMN 361
++ ++VK++
Sbjct: 503 AKEVLDNLVKLD 514
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 110/244 (45%), Gaps = 11/244 (4%)
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
++ R +D +I+ S ++ +FN + E + ++I N Q +
Sbjct: 41 QIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAHALNSQPYQ 100
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
AF F EM R + + T +L A + + L +H H+ K+ + SD+ + N+L+
Sbjct: 101 AFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALID 160
Query: 375 LYSKCG--NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
YS+CG V DA ++F + ER+ VS+NSM+ G + G +A LF +M L+ +
Sbjct: 161 CYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRDLI-SW 219
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
T L + C + F F+ M + ++ MV +AG + A + +
Sbjct: 220 NTMLDGYARCREMS---RAFELFEKMPERNTVS-----WSTMVMGYSKAGDMEMARVMFD 271
Query: 493 SMTF 496
M F
Sbjct: 272 KMPF 275
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
A LNQ Q+HA +++ N+ D+ I L+S S C A R+F + E N+ NS+I
Sbjct: 30 ANLNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLCNSLI 89
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN- 463
A N +A +F +M+ GL + T+ +L AC+ G + +K ++N
Sbjct: 90 RAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------GLSWLPVVKMMHNH 142
Query: 464 IEP---GPEHYA--CMVDILGRAGSLA--EAIDLINSMTFEPPPGVWGALLGA 509
IE + Y ++D R G L +A+ L M+ E W ++LG
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGG 194
>gi|296082839|emb|CBI22140.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 251/424 (59%), Gaps = 37/424 (8%)
Query: 187 GVQVHGLVSRFGFDYD---IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G+ +HG V +FGF I + +++ Y +LG M+ A K+F M++R+ VSWNS+++G
Sbjct: 3 GISIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAG 62
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
Y+ G++E+A LF++MP ++F SW MI+G G+++ + F+ MP+K++V+W +I
Sbjct: 63 YLKAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMI 122
Query: 304 SG-------------------------------FVNNEQYEEAFRWFIEMLRK--DVRPN 330
SG + N + EA F ML +V+P+
Sbjct: 123 SGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPD 182
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
++TL+SV+SA + L G I +++ ++ +E D + +L+ LY+KCG++ AY +F
Sbjct: 183 EMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFH 242
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ ++++V+Y +MI G NG +A+ LF +M D + PN ITF+ +L+A NH GLVEE
Sbjct: 243 GLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEE 302
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G+ F SMK YN+ P +HY MVD+ GRAG L EA++LI SM +P GVWGALL A
Sbjct: 303 GYRCFTSMKK-YNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLAC 361
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R H N++ ++AAQH ELEPD+ +LS++Y+ + D R+R K K K PG
Sbjct: 362 RLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPG 421
Query: 571 CSWI 574
CSW+
Sbjct: 422 CSWM 425
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 190/376 (50%), Gaps = 24/376 (6%)
Query: 14 TALINNNCSIYE---AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
TAL++ C + + A ++F M RN VS+ +M+ G+++ G +A L+ MP R +
Sbjct: 26 TALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKAGDMEKASSLFQQMPER--N 83
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
NA+ISG+++ G + A F+AM +K+ V+W +M+ GY K G V A E+FD++
Sbjct: 84 FASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGG 143
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG--GMAFNSITLTILFEACGRFFRYREGV 188
K+++ + AM+ Y + + +LF +M + + +TL + AC + R G
Sbjct: 144 KDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFGP 203
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
+ + R G + D L +++ +Y + G +D+A ++F + K+D V++ ++I G NG
Sbjct: 204 WIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGING 263
Query: 249 EIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK------SIELFNMMPEKDDVT 298
+ +A +LF+ M +++ ++T ++ G +E+ S++ +N++P D
Sbjct: 264 KAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDH-- 321
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
+ ++ F + +EA M ++P+ ++L A + G H
Sbjct: 322 YGIMVDLFGRAGRLQEALELIKSM---PMQPHAGVWGALLLACRLHNNVEFGEIAAQHCF 378
Query: 359 KMNMESDVSIQNSLVS 374
+ +E D + SL+S
Sbjct: 379 E--LEPDTTGYRSLLS 392
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 204/448 (45%), Gaps = 73/448 (16%)
Query: 76 ALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
AL+ Y K+G E A ++F+ M E++VV+W SM+ GY K G + +A +F +MPE+N +
Sbjct: 27 ALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKAGDMEKASSLFQQMPERNFAS 86
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
W AM+ G+++ + F +M + + +T+ + CG E L
Sbjct: 87 WNAMISGHVEFGDIDSARSFFDAMPQKN-NVSWMTMISGYSKCGDVDSACE------LFD 139
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM------SKRDAVSWNSLISGYVHNGE 249
+ G D++L N++I Y + +EA +F+ M + D ++ S+IS G+
Sbjct: 140 QVG-GKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGD 198
Query: 250 IE-----EAY--RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAI 302
+ E+Y RL M G T ++ ++ G+++K+ ELF+ + +KD V +TA+
Sbjct: 199 LRFGPWIESYMRRLGIEMDGH---LATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAM 255
Query: 303 ISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM 362
I G N + +A + F EM+ + PN +T +L+A
Sbjct: 256 ILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTA---------------------- 293
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS----YNSMISGFAQNGLGEEALN 418
Y+ G V + YR FT++ + N+V Y M+ F + G +EAL
Sbjct: 294 -------------YNHAGLVEEGYRCFTSMKKYNLVPSVDHYGIMVDLFGRAGRLQEALE 340
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
L + M + P+ + ++L AC VE G I + + + +EP Y ++ +
Sbjct: 341 LIKSMP---MQPHAGVWGALLLACRLHNNVEFGEI---AAQHCFELEPDTTGYRSLLSNI 394
Query: 479 GRAGSLAEAIDLINSMT----FEPPPGV 502
+G + + + +T F PG
Sbjct: 395 YASGERWDDVKRLRKVTKEKGFSKIPGC 422
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 167/487 (34%), Positives = 276/487 (56%), Gaps = 39/487 (8%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D+ ++ Y K G + AR+IFD+MP+++ V++ +M+DGY+K E +LF M
Sbjct: 156 DLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYIKCGLIESARELFDLMP 215
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG-FM 219
R ++ L+S NS+I+ Y + +
Sbjct: 216 R---------------------------EMKNLIS----------WNSMISGYAQTSDGV 238
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG 279
+ A+K+F+ M ++D +SWNSLI GYV +G +E+A LF MP +D V+W TMI G++ G
Sbjct: 239 NIASKLFAEMPEKDLISWNSLIYGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLG 298
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVL 338
+ K+ LF+ MP +D V + ++++G+V N + EA F +M ++ + P++ TL VL
Sbjct: 299 FVHKAKTLFDQMPHRDVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVL 358
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA A L++ +H ++V+ + +L+ +YSKCG++ A +F I+ ++I
Sbjct: 359 SAIAQLGQLSKAMDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENKSID 418
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
+N+MI G A +GLGE A N+ +++ + P+ ITF+ VL+AC+H GLV+EG + F+ M
Sbjct: 419 HWNAMIGGLAIHGLGESAFNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELM 478
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+ + IEP +HY CMVD+L R GS+ A +LI M EP +W L A H ++
Sbjct: 479 RRKHKIEPRLQHYGCMVDLLSRCGSIELAKNLIEEMPIEPNDVIWRTFLTACNHHKEFEI 538
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+L A+HL+ + + YV+LS++Y+ G+ +D VR K ++++K PGCSWI L
Sbjct: 539 GELVAKHLILQAGYNPSSYVLLSNMYASFGRWKDVRNVRTMMKERKLQKVPGCSWIELDG 598
Query: 579 KVHLFLA 585
+VH F
Sbjct: 599 RVHEFFV 605
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 197/411 (47%), Gaps = 22/411 (5%)
Query: 1 MADRTSASYNAMITALINNNCSIYE-AFEIFATMP--MRNAVSYAAMITGFVRRGMFYE- 56
M R S SYN+MI I C + E A E+F MP M+N +S+ +MI+G+ +
Sbjct: 183 MPQRDSVSYNSMIDGYIK--CGLIESARELFDLMPREMKNLISWNSMISGYAQTSDGVNI 240
Query: 57 AEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKG 116
A +L+ MP + D + N+LI GY+K GR E+A +F M +DVV W +M+DGY K G
Sbjct: 241 ASKLFAEMPEK--DLISWNSLIYGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLG 298
Query: 117 RVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILF 175
V +A+ +FD+MP ++VVA+ +M+ GY++ + ++F M + + + TL I+
Sbjct: 299 FVHKAKTLFDQMPHRDVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVL 358
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
A + + + + +H + F LG ++I MY + G + +A VF + +
Sbjct: 359 SAIAQLGQLSKAMDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENKSID 418
Query: 236 SWNSLISGYVHNGEIEEAYRLF----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM 291
WN++I G +G E A+ + R D++++ ++ S G +++ + F +M
Sbjct: 419 HWNAMIGGLAIHGLGESAFNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELM 478
Query: 292 PEKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
K + + ++ E A EM + PN + + L+A
Sbjct: 479 RRKHKIEPRLQHYGCMVDLLSRCGSIELAKNLIEEM---PIEPNDVIWRTFLTACNHHKE 535
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
G + H++ + + S L ++Y+ G D + T + ER +
Sbjct: 536 FEIGELVAKHLI-LQAGYNPSSYVLLSNMYASFGRWKDVRNVRTMMKERKL 585
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
KD W +I + A WF ML + ++ + S VL A + L G QI
Sbjct: 85 KDPFLWNLVIKSHSHGVDPRRALLWFCLMLENGISVDKFSFSLVLKACSRLGFLKGGMQI 144
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H + K + SD+ +QN L+ LY KCG + A +IF + +R+ VSYNSMI G+ + GL
Sbjct: 145 HGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYIKCGLI 204
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVG------------LVEEGFIYFKSM--- 458
E A LF M E + N I++ S++S + E+ I + S+
Sbjct: 205 ESARELFDLMPRE--MKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLIYG 262
Query: 459 ----------KTLYNIEPGPE--HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
K L+++ P + +A M+D + G + +A L + M +
Sbjct: 263 YVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMM 322
Query: 507 LGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
G + +++ ++ + E L PD T +VLS
Sbjct: 323 AGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLS 359
>gi|347954454|gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
Length = 824
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 190/598 (31%), Positives = 323/598 (54%), Gaps = 25/598 (4%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVC--SNA 76
+A ++F +P RN V++ A++ G+V+ GM EA L +M P R S C ++A
Sbjct: 218 DARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTRVTVSTCLSASA 277
Query: 77 LISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
+ G ++ G+ A I + E D + S+++ YCK G + A IFD+M EK+VV W
Sbjct: 278 NMRG-IEEGKQSHAIAIVNGL-ELDNILGTSILNFYCKVGLIDYAEMIFDRMIEKDVVTW 335
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
++ GY+ E+ + MR + F+ +TL+ L A R + G +V R
Sbjct: 336 NLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCYCIR 395
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
F+ DI+L ++ + MY + G + +A KVF ++D + WN+L++ Y +G EA RL
Sbjct: 396 HSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRL 455
Query: 257 F-----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFV 307
F E +P + ++W +I G + ++ E+F M + ++WT +++G V
Sbjct: 456 FYEMQLESVP-PNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGTFPNMISWTTMMNGLV 514
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDV 366
N EEA + +M +RPN +++ LSA A+L+ G IH ++++ S
Sbjct: 515 QNGCSEEAILFLRKMQESGMRPNVFSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSA 574
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK-D 425
SI+ SLV +Y+KCG++ A R+F + + YN+MIS +A G +EA+ L+R ++ D
Sbjct: 575 SIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAVALYRSLEED 634
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLA 485
G+ P+ IT +VLSACNH G + + F M + + ++P EHY MVD+L AG
Sbjct: 635 VGIKPDNITITNVLSACNHAGDINQAIEIFTDMVSKHGMKPCLEHYGLMVDLLASAGETE 694
Query: 486 EAIDLINSMTFEPPPGVWGALLGAGRTHLNL-DLAKLAAQHLMELEPDSATPYVVLSDLY 544
+A+ LI M ++P + +L+ + + + +L + L+E EP+++ YV +S+ Y
Sbjct: 695 KALSLIEEMPYKPDARMIQSLVASCKKQQHKSELMDYLSSQLLESEPENSGNYVRVSNAY 754
Query: 545 SVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK--DKVHLFLAGRKSCLDLKEIEVTL 600
+V G + ++R K+K ++K PGCSWI +K + VH+F+A + L EI L
Sbjct: 755 AVEGSWDEVVKMREMMKVKGLKKKPGCSWIQVKGEEGVHVFVANDNTHLRNNEIRKIL 812
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 218/425 (51%), Gaps = 46/425 (10%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y K + A +F K+ +NV +W A++ ++ E F+ M G+ ++ +
Sbjct: 109 YAKCDALEVAEVLFSKLRVRNVFSWAAIIGVKCRIGLVEGALMGFVEMLENGIFPDNFVV 168
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ +ACG R G VHG V++ G + + +S+ MYG+ G +D+A KVF + +
Sbjct: 169 PNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPE 228
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGK-- 263
R+ V+WN+L+ GYV NG EEA RL M GK
Sbjct: 229 RNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTRVTVSTCLSASANMRGIEEGKQS 288
Query: 264 -----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
D + T+++ + G ++ + +F+ M EKD VTW +ISG+V+
Sbjct: 289 HAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDRMIEKDVVTWNLLISGYVHQGLV 348
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
E A M ++++ + +TLS+++SA+A T L G ++ + ++ + ESD+ + ++
Sbjct: 349 ENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTA 408
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQ 432
V +Y+KCG+VVDA ++F + +++++ +N++++ +A++GL EAL LF +M+ E + PN
Sbjct: 409 VDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNV 468
Query: 433 ITF-LSVLSAC--NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAID 489
IT+ L +LS V +E F+ +S T P + M++ L + G EAI
Sbjct: 469 ITWNLIILSLLRNGQVNEAKEMFLQMQSSGTF----PNMISWTTMMNGLVQNGCSEEAIL 524
Query: 490 LINSM 494
+ M
Sbjct: 525 FLRKM 529
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 276/487 (56%), Gaps = 39/487 (8%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D+ ++ Y K G + AR+IFD+MP+++ V++ +M+DGY+K E +LF M
Sbjct: 159 DLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLMP 218
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG-FM 219
++ L+S NS+I+ Y + +
Sbjct: 219 E---------------------------EMKNLIS----------WNSMISGYAQTSDGV 241
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKG 279
D A+K+FS M +D +SWNS+I GYV +G IE+A LF+ MP +D V+W+TMI G++ G
Sbjct: 242 DIASKLFSEMPDKDLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLG 301
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD-VRPNQLTLSSVL 338
+ ++ LF+ MP +D V++ ++I+G+V N EA F +M ++ + P++ TL VL
Sbjct: 302 FVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVL 361
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
SA A L++ +H ++V+ + +L+ +YSKCG++ A +F I+ ++I
Sbjct: 362 SAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSID 421
Query: 399 SYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM 458
+N+MI G A +GLGE A ++ +++ + P+ ITF+ +L+AC+H GLV+EG + F+ M
Sbjct: 422 HWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELM 481
Query: 459 KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL 518
+ + IEP +HY CMVDIL R+GS+ A +LI M EP +W L A H +
Sbjct: 482 RRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLAACNHHKEFET 541
Query: 519 AKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKD 578
+L A+HL+ + + YV+LS+LY+ GK +D R+R K ++I K PGCSWI L
Sbjct: 542 GELVAKHLIWEAGYNPSSYVLLSNLYASFGKWKDVRRIRTIMKERKIEKVPGCSWIELDG 601
Query: 579 KVHLFLA 585
+VH F
Sbjct: 602 RVHEFFV 608
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 198/413 (47%), Gaps = 26/413 (6%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMP--MRNAVSYAAMITGFVRRGMFYE-A 57
M R S SYN+MI + S A E+F MP M+N +S+ +MI+G+ + + A
Sbjct: 186 MPQRDSVSYNSMIDGYVKCG-STESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIA 244
Query: 58 EELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGR 117
+L+ MP + D + N++I GY+K GR E+A +F+ M +DVV W +M+DGY K G
Sbjct: 245 SKLFSEMPDK--DLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGF 302
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFE 176
V +A+ +FD+MP ++VV++ +M+ GY++ + ++F M + ++ + TL I+
Sbjct: 303 VHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLS 362
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
A + R + + +H + F LG ++I MY + G + A VF + +
Sbjct: 363 AIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDH 422
Query: 237 WNSLISGYVHNGEIEEAYRLF----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP 292
WN++I G +G E A+ + R D +++ ++ S G +++ + F +M
Sbjct: 423 WNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELMR 482
Query: 293 EKDDVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
K + + ++ + E A EM + PN + + L+A
Sbjct: 483 RKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEM---PIEPNDVIWRTFLAACNHHKEF 539
Query: 348 NQGSQIHAHVV---KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
G + H++ N S V + N LY+ G D RI T + ER I
Sbjct: 540 ETGELVAKHLIWEAGYNPSSYVLLSN----LYASFGKWKDVRRIRTIMKERKI 588
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 31/277 (11%)
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+D W A+I + A F ML V ++ +LS VL A + + +G QI
Sbjct: 88 EDXYLWNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQI 147
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H + K + SD+ +QN L+ LY KCG + A +IF + +R+ VSYNSMI G+ + G
Sbjct: 148 HGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGST 207
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVG------------LVEEGFIYFKSM--- 458
E A LF M +E + N I++ S++S + ++ I + SM
Sbjct: 208 ESARELFDLMPEE--MKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLISWNSMIDG 265
Query: 459 ----------KTLYNIEPGPE--HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
K L+++ P + ++ M+D + G + +A L + M +
Sbjct: 266 YVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMI 325
Query: 507 LGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
G + N++ ++ + E L PD T +VLS
Sbjct: 326 AGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLS 362
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 171/480 (35%), Positives = 270/480 (56%), Gaps = 37/480 (7%)
Query: 121 AREIFD----KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFE 176
A++IF + PE V W + + + D D LF +R+ + ++ T + +
Sbjct: 79 AQQIFKCVEKQKPETFV--WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLR 136
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
AC G +HG+V + GF ++ L N I+ +Y G
Sbjct: 137 ACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCG------------------- 177
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
E+ EA LFE+MP +D V+W MI +G+ E + +LF+ MPE++
Sbjct: 178 ------------EMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNV 225
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+WT++I+G+V + +EA F +M V+ N++T+ +VL+A A L+ G +IH +
Sbjct: 226 RSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEY 285
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
+ + +V I N+L+ +Y KCG + +A ++F ++ER +VS+++MI G A +G EEA
Sbjct: 286 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEA 345
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVD 476
L LF M G+ PN +TF+ +L AC+H+GL+ EG +F SM Y I P EHY CMVD
Sbjct: 346 LRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVD 405
Query: 477 ILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATP 536
+L RAG L EA + I +M +P VWGALLGA R H N+++A+ A +HL+EL+P +
Sbjct: 406 LLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY 465
Query: 537 YVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
YVVLS++Y+ G+ D RVR K ++++K+PG S I + VH F+AG +S D ++I
Sbjct: 466 YVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQI 525
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 178/391 (45%), Gaps = 35/391 (8%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
N ++ Y G EA +FE M ++DVV W M+ K+G A ++F +MPE+NV
Sbjct: 166 QNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNV 225
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
+WT+M+ GY++ ++ LF M G+ N +T+ + AC G+++H
Sbjct: 226 RSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEY 285
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+R GF ++ + N++I MY + G ++EA KVF M +R VSW+++I G +G EEA
Sbjct: 286 SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEA 345
Query: 254 YRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIIS 304
RLF M + V++ ++ S G + + F M + + ++
Sbjct: 346 LRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVD 405
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
EA + + M ++PN + ++L A + + H+++++ +
Sbjct: 406 LLSRAGLLHEAHEFILNM---PMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLN 462
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI--------VSYNSMISGFAQNGLGEEA 416
D L ++Y++ G D R+ + +R + ++ + ++ F GEE+
Sbjct: 463 D-GYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVA---GEES 518
Query: 417 L-----------NLFRKMKDEGLVPNQITFL 436
L +M+ +G VPN L
Sbjct: 519 HPDTEQIFQRWEELLEEMRLKGYVPNTSVVL 549
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 191/430 (44%), Gaps = 39/430 (9%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R ++N MI LI A+++F+ MP RN S+ +MI G+V+ G EA L
Sbjct: 189 MPQRDVVTWNIMIAQLIKQG-DHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHL 247
Query: 61 YVNMPARWR--DSVCSNALISGYLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCK 114
+ M + V A+++ +G + RI E +++V +++D Y K
Sbjct: 248 FAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVK 307
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + EA ++F++M E+ VV+W+AM+ G E+ LF M + G+ N +T L
Sbjct: 308 CGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGL 367
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILG----NSIITMYGRLGFMDEANK-VFSMM 229
AC EG + ++R DY II ++ + R G + EA++ + +M
Sbjct: 368 LHACSHMGLISEGRRFFASMTR---DYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 424
Query: 230 SKRDAVSWNSLISG-YVH-NGEI-EEAYR-LFERMPGKDFVSWTTMITGFSSKGNLEKSI 285
K + V W +L+ VH N E+ EEA + L E P D + + ++ G E +
Sbjct: 425 MKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY-YVVLSNIYAEAGRWEDTA 483
Query: 286 ELFNMMPEKD--------DVTWTAIISGFVNNEQ----YEEAF-RW---FIEMLRKDVRP 329
+ M ++ +T ++ FV E+ E+ F RW EM K P
Sbjct: 484 RVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVP 543
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
N + + +++ S+ A V MN ++ I+ ++ C + A+++
Sbjct: 544 NTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIR--IMKNLRICEDCHSAFKL 601
Query: 389 FTNIDERNIV 398
+ I R IV
Sbjct: 602 ISAIVNREIV 611
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 280/530 (52%), Gaps = 39/530 (7%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN--VVAWTAMVDGYMKVDC 148
A++ + + S++ Y AR +FD P + + W M+ Y K+
Sbjct: 95 AQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHYPSPSPPIKLWNVMIRTYSKIRN 154
Query: 149 FEDGFDLFLSMRR--GGMAF--NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
++ LFL M G M + T T + +C G VHG+V + GF+ ++
Sbjct: 155 SQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFESNLY 214
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
+GNS+I M M++A KVF+ +M +D
Sbjct: 215 VGNSVINMCSVFARMEDARKVFN-------------------------------QMSERD 243
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
SWT+++ G++ G ++++ ELFNMMP ++DV+W +ISGF+ +Y EA +F ML
Sbjct: 244 VFSWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLC 303
Query: 325 KD-VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
D V PN+ L VLSA A L+QG+ IH ++ K+ + +I +L+ +Y+KCG +
Sbjct: 304 DDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRID 363
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A R+F I +R+++S+ SMISG + +GLG++AL +F +M DE ++PN+IT L VL+ C+
Sbjct: 364 CASRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCS 423
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H GLVEEG +M++L+ I P EHY C +D+LGRAG L A++++ +M EP +W
Sbjct: 424 HSGLVEEGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIW 483
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELE-PDSATPYVVLSDLYSVIGKKRDGNRVRMKKKL 562
ALL A R H N++L + H+ +L+ D V+LS+LY+ +G+ +R
Sbjct: 484 RALLSASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVD 543
Query: 563 KRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
+R SPGCSWI + VH F + + EI L I K + +
Sbjct: 544 RRSESSPGCSWIEVNGLVHEFRVADQLHPQIVEIRNKLNEILKRLSQIGY 593
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 159/349 (45%), Gaps = 24/349 (6%)
Query: 41 YAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEK 100
Y ++ G V + F LYV N++I+ R E+A ++F M E+
Sbjct: 196 YGEIVHGMVVKSGF--ESNLYVG-----------NSVINMCSVFARMEDARKVFNQMSER 242
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV +W S++ GY K G + A E+F+ MP +N V+W M+ G++ + + F +M
Sbjct: 243 DVFSWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNML 302
Query: 161 -RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
+ N L + AC +G +H + + G + ++I MY + G +
Sbjct: 303 CDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRI 362
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGF 275
D A++VF+ + KRD +S+ S+ISG ++G ++A R+F +M ++ ++ ++ G
Sbjct: 363 DCASRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGC 422
Query: 276 SSKGNLEKSIELFNMMPE----KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
S G +E+ + M + + Y E ++ + + P+
Sbjct: 423 SHSGLVEEGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTM--PMEPDI 480
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+ ++LSAS +N G QI +H+ ++ + L +LY+ G
Sbjct: 481 VIWRALLSASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLG 529
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 19/285 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN-----ALISG 80
A E+F MP+RN VS+A MI+GF+ G + EA + NM D V N ++S
Sbjct: 263 ACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLC--DDRVNPNEAVLVCVLSA 320
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGS-----MVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+G ++ I ++K + S ++D Y K GR+ A +F+ + +++V++
Sbjct: 321 CAHLGALDQGNWI-HLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLS 379
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV-HGLV 194
+T+M+ G +D +F M + N IT+ + C EG + +
Sbjct: 380 FTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANME 439
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISG--YVHNGEI- 250
S +G I I + GR G+++ A +V M + D V W +L+S HN +
Sbjct: 440 SLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNLG 499
Query: 251 EEAYRLFERMPGKDFVSWTTMITG-FSSKGNLEKSIELFNMMPEK 294
E+ ++ D +++ ++S G E+ E+ +M ++
Sbjct: 500 EQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDR 544
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
PN T S +L+ + L Q IHA VV + S+ S+ SL+ Y N +A +
Sbjct: 72 PNPQTFSLLLNQRPKLSPLQQ---IHAQVVTQALSSNASLTASLIHCYLCAKNHPNARIL 128
Query: 389 FTNIDERN--IVSYNSMISGFAQNGLGEEALNLFRKM----KDEGLVPNQITFLSVLSAC 442
F + + I +N MI +++ +E ++LF +M +VP++ TF V+++C
Sbjct: 129 FDHYPSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSC 188
Query: 443 NH-VGLVEEGFIYFKSMKTLY--NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
+H + L+ ++ +K+ + N+ G ++++ + +A + N M+ E
Sbjct: 189 SHQISLIYGEIVHGMVVKSGFESNLYVGNS----VINMCSVFARMEDARKVFNQMS-ERD 243
Query: 500 PGVWGALLGAGRTHLNLDLA 519
W +LLG H +D A
Sbjct: 244 VFSWTSLLGGYAKHGEMDRA 263
>gi|108711657|gb|ABF99452.1| Calreticulin family protein, expressed [Oryza sativa Japonica
Group]
Length = 1111
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 196/649 (30%), Positives = 313/649 (48%), Gaps = 88/649 (13%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARW---------- 68
+A E+F M R+ ++++AMI + RGM+ + L V M P R+
Sbjct: 100 DAREVFDGMGRRDLLAWSAMIGAYAIRGMYSDVLALAVTMVEEGVLPDRFLITRILQACA 159
Query: 69 ------------------------RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA 104
+D N+++ Y K G A ++F+ MV +D+
Sbjct: 160 YAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAKCGDLGWARKVFDKMVCRDLGT 219
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPEK--------------------------------- 131
W SM+ GYC+ EAR + D M ++
Sbjct: 220 WNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQME 279
Query: 132 ------NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+VV WT++V G++ +D ++ F+ MR G+ N +++ AC
Sbjct: 280 ESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLN 339
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+ ++H + G +++ GNS++ MY + G + A ++FS + +D SWNS+ISGY
Sbjct: 340 QAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAWRIFSGIPDKDIFSWNSMISGYA 399
Query: 246 HNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDV 297
G +AY LF +M ++ ++W TMI+G+ G+ E++ ELF MM ++D
Sbjct: 400 QAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHGVKRDTA 459
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
TW +I+G V+N Y+ A R F +M RP+ +T+ S++ A + +IHA +
Sbjct: 460 TWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITILSIIPAFTNLVASWKVREIHACI 519
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
N+E D I N+L++ YSK GN+ A +F RNI+S+N +I +G EAL
Sbjct: 520 FHHNLELDGKIANALINAYSKSGNLASACAVFDMHSSRNIISWNCIILAHVLHGSPNEAL 579
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
+LF +MK EG+VP+ T ++V+ A G V EG F +M YNI P +HYA MVD+
Sbjct: 580 DLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTFFNMANDYNITPELDHYAAMVDL 639
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGR+G L EA +LI+ M P VW L A H N+ LA LAA+ L ++P
Sbjct: 640 LGRSGRLKEAYELIDEMPLIPNSTVWDTFLTAAVMHGNVRLAHLAARELSAIDPGDPRVQ 699
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ S L + GK D K + + + CS I +++KV++F G
Sbjct: 700 RLGSSLQDLTGKTVDVPEEMTPNKGRNLDEVESCS-IEIRNKVYVFSNG 747
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 216/375 (57%), Gaps = 15/375 (4%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
E VA ++ + GR+ +ARE+FD M ++++AW+AM+ Y + D L ++
Sbjct: 79 EPRFVAETKLITVHSCAGRLGDAREVFDGMGRRDLLAWSAMIGAYAIRGMYSDVLALAVT 138
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF---DYDIILGNSIITMYGR 215
M G+ + +T + +AC G +H + R GF D+ +GNS++ MY +
Sbjct: 139 MVEEGVLPDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAK 198
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSWT 269
G + A KVF M RD +WNS+I GY + E EEA L + M PG V+W
Sbjct: 199 CGDLGWARKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPG--VVTWN 256
Query: 270 TMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
T+I+ ++ G+L+ ++EL M E D VTWT+++SGFV+ ++ +EA R FI M
Sbjct: 257 TLISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLA 316
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
V PN ++++ +SA A+ LNQ ++H+H +K+ ++V NSLV +Y+KCG +V A
Sbjct: 317 GVEPNGMSIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAA 376
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+RIF+ I +++I S+NSMISG+AQ G +A LF KM++ G+ N IT+ +++S
Sbjct: 377 WRIFSGIPDKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRN 436
Query: 446 GLVEEGFIYFKSMKT 460
G E F F+ M++
Sbjct: 437 GDDERAFELFQMMES 451
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 162/396 (40%), Gaps = 62/396 (15%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP--ARWRDSVCSNALISG 80
I A+ IF+ +P ++ S+ +MI+G+ + G +A EL+ M R+ + N +ISG
Sbjct: 373 IVAAWRIFSGIPDKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISG 432
Query: 81 YLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
Y++ G E A +F+ M V++D W ++ G G A IF +M
Sbjct: 433 YIRNGDDERAFELFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQAL----- 487
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+RR + IT+ + A + ++H +
Sbjct: 488 ----------------------LRRP----DYITILSIIPAFTNLVASWKVREIHACIFH 521
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
+ D + N++I Y + G + A VF M S R+ +SWN +I +V +G EA L
Sbjct: 522 HNLELDGKIANALINAYSKSGNLASACAVFDMHSSRNIISWNCIILAHVLHGSPNEALDL 581
Query: 257 FERMPGK----DFVSWTTMITGFSSKGNLEKSIELF-------NMMPEKDDVTWTAIISG 305
F +M + D + T+I + G + + + F N+ PE D + A++
Sbjct: 582 FCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTFFNMANDYNITPELDH--YAAMVDL 639
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES- 364
+ + +EA+ EM + PN + L TA + G+ AH+ + +
Sbjct: 640 LGRSGRLKEAYELIDEM---PLIPNSTVWDTFL-----TAAVMHGNVRLAHLAARELSAI 691
Query: 365 ---DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
D +Q SL G VD T RN+
Sbjct: 692 DPGDPRVQRLGSSLQDLTGKTVDVPEEMTPNKGRNL 727
>gi|218193953|gb|EEC76380.1| hypothetical protein OsI_13992 [Oryza sativa Indica Group]
Length = 822
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 196/649 (30%), Positives = 313/649 (48%), Gaps = 88/649 (13%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARW---------- 68
+A E+F M R+ ++++AMI + RGM+ + L V M P R+
Sbjct: 63 DAREVFDGMGRRDLLAWSAMIGAYAIRGMYSDVLALAVTMVEEGVLPDRFLITRILQACA 122
Query: 69 ------------------------RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVA 104
+D N+++ Y K G A ++F+ MV +D+
Sbjct: 123 YAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAKCGDLGWARKVFDKMVCRDLGT 182
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPEK--------------------------------- 131
W SM+ GYC+ EAR + D M ++
Sbjct: 183 WNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQME 242
Query: 132 ------NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
+VV WT++V G++ +D ++ F+ MR G+ N +++ AC
Sbjct: 243 ESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLN 302
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
+ ++H + G +++ GNS++ MY + G + A ++FS + +D SWNS+ISGY
Sbjct: 303 QAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAWRIFSGIPDKDIFSWNSMISGYA 362
Query: 246 HNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDV 297
G +AY LF +M ++ ++W TMI+G+ G+ E++ ELF MM ++D
Sbjct: 363 QAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHGVKRDTA 422
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
TW +I+G V+N Y+ A R F +M RP+ +T+ S++ A + +IHA +
Sbjct: 423 TWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITILSIIPAFTNLVASWKVREIHACI 482
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
N+E D I N+L++ YSK GN+ A +F RNI+S+N +I +G EAL
Sbjct: 483 FHHNLELDGKIANALINAYSKSGNLASACAVFDMHSSRNIISWNCIILAHVLHGSPNEAL 542
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
+LF +MK EG+VP+ T ++V+ A G V EG F +M YNI P +HYA MVD+
Sbjct: 543 DLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTFFNMANDYNITPELDHYAAMVDL 602
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGR+G L EA +LI+ M P VW L A H N+ LA LAA+ L ++P
Sbjct: 603 LGRSGRLKEAYELIDEMPLIPNSTVWDTFLTAAVMHGNVRLAHLAARELSAIDPGDPRVQ 662
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ S L + GK D K + + + CS I +++KV++F G
Sbjct: 663 RLGSSLQDLTGKTVDVPEEMTPNKGRNLDEVESCS-IEIRNKVYVFSNG 710
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 216/375 (57%), Gaps = 15/375 (4%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
E VA ++ + GR+ +ARE+FD M ++++AW+AM+ Y + D L ++
Sbjct: 42 EPRFVAETKLITVHSCAGRLGDAREVFDGMGRRDLLAWSAMIGAYAIRGMYSDVLALAVT 101
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF---DYDIILGNSIITMYGR 215
M G+ + +T + +AC G +H + R GF D+ +GNS++ MY +
Sbjct: 102 MVEEGVLPDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAK 161
Query: 216 LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDFVSWT 269
G + A KVF M RD +WNS+I GY + E EEA L + M PG V+W
Sbjct: 162 CGDLGWARKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPG--VVTWN 219
Query: 270 TMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
T+I+ ++ G+L+ ++EL M E D VTWT+++SGFV+ ++ +EA R FI M
Sbjct: 220 TLISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLA 279
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
V PN ++++ +SA A+ LNQ ++H+H +K+ ++V NSLV +Y+KCG +V A
Sbjct: 280 GVEPNGMSIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAA 339
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+RIF+ I +++I S+NSMISG+AQ G +A LF KM++ G+ N IT+ +++S
Sbjct: 340 WRIFSGIPDKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRN 399
Query: 446 GLVEEGFIYFKSMKT 460
G E F F+ M++
Sbjct: 400 GDDERAFELFQMMES 414
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 162/396 (40%), Gaps = 62/396 (15%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP--ARWRDSVCSNALISG 80
I A+ IF+ +P ++ S+ +MI+G+ + G +A EL+ M R+ + N +ISG
Sbjct: 336 IVAAWRIFSGIPDKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISG 395
Query: 81 YLKVGRCEEAARIFEAM----VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAW 136
Y++ G E A +F+ M V++D W ++ G G A IF +M
Sbjct: 396 YIRNGDDERAFELFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQAL----- 450
Query: 137 TAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSR 196
+RR + IT+ + A + ++H +
Sbjct: 451 ----------------------LRRP----DYITILSIIPAFTNLVASWKVREIHACIFH 484
Query: 197 FGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL 256
+ D + N++I Y + G + A VF M S R+ +SWN +I +V +G EA L
Sbjct: 485 HNLELDGKIANALINAYSKSGNLASACAVFDMHSSRNIISWNCIILAHVLHGSPNEALDL 544
Query: 257 FERMPGK----DFVSWTTMITGFSSKGNLEKSIELF-------NMMPEKDDVTWTAIISG 305
F +M + D + T+I + G + + + F N+ PE D + A++
Sbjct: 545 FCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTFFNMANDYNITPELDH--YAAMVDL 602
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES- 364
+ + +EA+ EM + PN + L TA + G+ AH+ + +
Sbjct: 603 LGRSGRLKEAYELIDEM---PLIPNSTVWDTFL-----TAAVMHGNVRLAHLAARELSAI 654
Query: 365 ---DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
D +Q SL G VD T RN+
Sbjct: 655 DPGDPRVQRLGSSLQDLTGKTVDVPEEMTPNKGRNL 690
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 177/523 (33%), Positives = 272/523 (52%), Gaps = 71/523 (13%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + A +F+ + + N W M+ G D ++ M G+ NS T L
Sbjct: 80 GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMY---GRLGF-------------- 218
++C + +EG Q+HG V + G + D + S+I MY G LG+
Sbjct: 140 KSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAV 199
Query: 219 --------------MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--- 261
+D+A ++F + RDAVSWN++I+GY +G EEA F+ M
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN 259
Query: 262 -----------------------GKDFVSW-------------TTMITGFSSKGNLEKSI 285
G SW +I +S G+L+K+
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKAR 319
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+LF + EKD ++W +I G+ + Y+EA F +M + +V PN +T S+L A A
Sbjct: 320 DLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLG 379
Query: 346 TLNQGSQIHAHVVKMNME-SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
L+ G IHA++ K + ++ S+ SL+ +Y+KCGN+ A ++F + +++ S+N+MI
Sbjct: 380 ALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMI 439
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
SG A +G AL LFR+M+DEG P+ ITF+ VLSAC+H GLVE G F SM Y+I
Sbjct: 440 SGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDI 499
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
P +HY CM+D+LGRAG EA L+ +M +P +WG+LLGA R H N++L + AA+
Sbjct: 500 SPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAK 559
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRK 567
HL ELEP++ YV+LS++Y+ G+ D R+R K K ++K
Sbjct: 560 HLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 198/455 (43%), Gaps = 79/455 (17%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D +LI+ Y + G A +F +D V++ +++ GY +G + +AR +F+++P
Sbjct: 166 DPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIP 225
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
++ V+W AM+ GY + FE+ F M+R +A N T+ + AC + G
Sbjct: 226 VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNW 285
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
V + G ++ L N++I MY + G +D+A +F + ++D +SWN +I GY H
Sbjct: 286 VRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNS 345
Query: 250 IEEAYRLFERMPGKD-------FVS---------------------------------WT 269
+EA LF +M + FVS WT
Sbjct: 346 YKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWT 405
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
++I ++ GN+E + ++F M K +W A+ISG + A F +M + P
Sbjct: 406 SLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEP 465
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC-GNVVDAYRI 388
+ +T VLSA + HA LV L +C ++V+ Y I
Sbjct: 466 DDITFVGVLSACS-----------HA---------------GLVELGRQCFSSMVEDYDI 499
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
+ Y MI + GL +EA L + M+ + P+ + S+L AC G V
Sbjct: 500 SPKLQH-----YGCMIDLLGRAGLFDEAEALMKNME---MKPDGAIWGSLLGACRVHGNV 551
Query: 449 EEGFIYFKSMKTLYNIEP-GPEHYACMVDILGRAG 482
E G + K L+ +EP P Y + +I AG
Sbjct: 552 ELGEF---AAKHLFELEPENPGAYVLLSNIYATAG 583
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 202/438 (46%), Gaps = 62/438 (14%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
T+LIN N + A +F+ +R+AVS+ A+ITG+ RG +A L+ +P RD
Sbjct: 171 TSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPV--RD 228
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAMVEKDVV--------------------------A 104
+V NA+I+GY + GR EEA F+ M +V +
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288
Query: 105 W-------------GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
W +++D Y K G + +AR++F+ + EK++++W M+ GY ++ +++
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV-SRFGFDYDIILGNSII 210
LF M++ + N +T + AC G +H + +F + L S+I
Sbjct: 349 ALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLI 408
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----V 266
MY + G ++ A +VF+ M + SWN++ISG +G A LF +M + F +
Sbjct: 409 DMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDI 468
Query: 267 SWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNNEQYEEAFRWFIE 321
++ +++ S G +E + F+ M E D++ + +I ++EA E
Sbjct: 469 TFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA-----E 523
Query: 322 MLRK--DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
L K +++P+ S+L A + G H+ ++ E+ + L ++Y+
Sbjct: 524 ALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYV-LLSNIYATA 582
Query: 380 GNVVDAYRIFTNIDERNI 397
G D RI T ++++ +
Sbjct: 583 GRWDDVARIRTKLNDKGM 600
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 352 QIHAHVVKMNMESDVSIQNSLVSL--YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
QIH+ ++K + + + L+ S GN+ A +F +I++ N +N+MI G +
Sbjct: 50 QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSL 109
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+ A++ + +M G+ PN TF +L +C VG +EG + L +E P
Sbjct: 110 SSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKL-GLESDPF 168
Query: 470 HYACMVDILGRAGSLAEA 487
+ ++++ + G L A
Sbjct: 169 VHTSLINMYAQNGELGYA 186
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 308/580 (53%), Gaps = 50/580 (8%)
Query: 37 NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-----------SVCSNALISGYLKVG 85
NA A M+ GF+R G A L+ + RD +V + A S +
Sbjct: 96 NAYMLATMMRGFLRAGKPTHALTLFRRV---LRDRLAVDARTIVFAVKAAATSSSPTEAI 152
Query: 86 RCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMK 145
C R F + + V+A ++V Y + +AR++FD+M +++VV+WT ++DGY +
Sbjct: 153 HCVAFKRGF---IGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYAR 209
Query: 146 VDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
++ + +F M + N +TL A G+ G VH + G +
Sbjct: 210 GGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVN 269
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
L N+++ M+G+ G + A +VF + MP KD
Sbjct: 270 LENALVDMFGKCGCVAAAKEVF-------------------------------DGMPIKD 298
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
SWT+M++ ++ G+LE + +LF +P ++ V+W+ +++ + + +EA R F +M+
Sbjct: 299 VYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIA 358
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIH-AHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
V P TL SVLSA A +L+ G+ ++ ++V +E ++ N+ + +++KCG+V
Sbjct: 359 AGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVG 418
Query: 384 DAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
A R+F+N++++N+VS+N+MI +G EEAL+LF++ K G++P++ T++ VLSAC+
Sbjct: 419 AASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACS 478
Query: 444 HVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
H GLV EG +FK MK +Y IEP EHYACM+D+LG+ G L EA ++ SM W
Sbjct: 479 HGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGW 538
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLK 563
GALL A R H N+++ K AA L L+P + YV++S +Y+ K +R + +
Sbjct: 539 GALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDR 598
Query: 564 RIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
R++K+PGCS I + K H FL S + ++I L I
Sbjct: 599 RVKKNPGCSSIEVDGKCHEFLVADVSHVHSEDIYAALGNI 638
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 117/297 (39%), Gaps = 45/297 (15%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NA++ C + A E+F MP+++ S+ +M++ + + G A +L+ +P R
Sbjct: 272 NALVDMFGKCGC-VAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPN--R 328
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEK----------------------DVVAW-- 105
+ V + +++ Y +EA RIF M+ DV W
Sbjct: 329 NVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLY 388
Query: 106 ----------------GSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCF 149
+ +D + K G V A +F M +KNVV+W M+ +
Sbjct: 389 DTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQP 448
Query: 150 EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG-VQVHGLVSRFGFDYDIILGNS 208
E+ LF + G+ + T + AC EG + +G +
Sbjct: 449 EEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYAC 508
Query: 209 IITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
+I + G++G + EA +V SM D W +L++ +G +E +++ G D
Sbjct: 509 MIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLAGLD 565
>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Brachypodium distachyon]
Length = 851
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 287/528 (54%), Gaps = 18/528 (3%)
Query: 74 SNALISGYLKVGRCEEA------ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
++ L+ G+L E A A + A VAW ++V + G V +A E+ +
Sbjct: 203 AHPLVPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWDAVVACCVRLGLVDDAMELAGR 262
Query: 128 M----PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
M PE + W A++ G + + + M G+ ++ T++ L ++
Sbjct: 263 MARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPDATTVSSLLKSVANAGM 322
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
R G++VH R G D G +++ MY + G +D A +VF + R+ +WNSL++G
Sbjct: 323 VRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRLDCARRVFDTLEHRNLATWNSLVAG 382
Query: 244 YVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----KD 295
+ + G+ E A L ERM + +W +ITG+S G +++ L + +
Sbjct: 383 HAYAGQFEAALELVERMKRNRLDPNVTTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPN 442
Query: 296 DVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHA 355
V+WT++ISG +N +YE++F +F EM + V+P+ +T+ +L A A A L +G ++H
Sbjct: 443 VVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGLALLKKGKELHC 502
Query: 356 HVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEE 415
++ + D+ + +L+ +YSK G++ A RIF I +N+V N+M++G A +G E
Sbjct: 503 FALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHE 562
Query: 416 ALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMV 475
A+ LF + GL P+ ITF ++L+AC +GL+ EG+ YF +M+T Y + P E+YACMV
Sbjct: 563 AITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENYACMV 622
Query: 476 DILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSAT 535
D+L R+G L EA+ LI +P +WGALL H NLDLA++AA++L LEP ++
Sbjct: 623 DLLARSGYLDEAMALIERSPVDPGASLWGALLTGCSIHGNLDLAEVAARNLFRLEPYNSA 682
Query: 536 PYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
Y+++ LY + + ++ K + + PG SWI ++ +H+F
Sbjct: 683 NYLMIMSLYEHEQMYDEADSLKYAMKARGVNTRPGWSWIQIEQGIHVF 730
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 172/411 (41%), Gaps = 70/411 (17%)
Query: 90 AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE----KNVVAWTAMVDGYMK 145
A R A E V ++ D + GR +R + ++ E K+ V W V +
Sbjct: 89 AVRAGHATREPRVAC--ALSDLLARLGRGPSSRRLLEEADESEGGKDAVLWNKQVAMLAE 146
Query: 146 VDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF-DYDII 204
+++ F M+ G+A + L + ACGR REG VH + G D +
Sbjct: 147 AGEWDEAIGAFREMQARGVAADGYALARVLHACGRAAARREGKAVHAHALKAGLVDAHPL 206
Query: 205 LGNSIITMYGRLGFMDEANKV-FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+ + MY + A V +V+W+++++ V G +++A L RM +
Sbjct: 207 VPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWDAVVACCVRLGLVDDAMELAGRM-AR 265
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
D PE TW A++SG + + EA ML
Sbjct: 266 DG--------------------------PEPTLATWNAVLSGCARHGRDREALAVLRRML 299
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
+ + P+ T+SS+L + A + G ++H ++ + D +LV +Y+KCG +
Sbjct: 300 EQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRLD 359
Query: 384 DAYRIFTNIDERNIVSYNS-----------------------------------MISGFA 408
A R+F ++ RN+ ++NS +I+G++
Sbjct: 360 CARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNGLITGYS 419
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
NGL +A+ L R++K GL PN +++ S++S H G E+ F +FK M+
Sbjct: 420 LNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQ 470
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 121/543 (22%), Positives = 209/543 (38%), Gaps = 152/543 (27%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCS--NALISGYLK 83
A + AT P R+ V++ A++ VR G+ +A EL M + + NA++SG +
Sbjct: 226 AVLLRATPPPRS-VAWDAVVACCVRLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCAR 284
Query: 84 VGRCEEAARIFEAMVEK---------------------------------------DVVA 104
GR EA + M+E+ D
Sbjct: 285 HGRDREALAVLRRMLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYT 344
Query: 105 WGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM 164
++VD Y K GR+ AR +FD + +N+ W ++V G+ FE +L M+R +
Sbjct: 345 GTALVDMYAKCGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRL 404
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
D ++ N +IT Y G +A
Sbjct: 405 -----------------------------------DPNVTTWNGLITGYSLNGLSSQAML 429
Query: 225 VFSMMSKR----DAVSWNSLISGYVHNGEIEEAYRLFERM-------------------- 260
+ + + VSW SLISG HNGE E+++ F+ M
Sbjct: 430 LLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACA 489
Query: 261 ------PGK-------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTA 301
GK D V T +I +S G+L + +F + K+ V A
Sbjct: 490 GLALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNA 549
Query: 302 IISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMN 361
+++G + Q EA F ++ R ++P+ +T +++L+A + + +G + N
Sbjct: 550 MLTGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFD-----N 604
Query: 362 MESDVSIQNS------LVSLYSKCGNVVDAYRIFTNIDERNIVS-----YNSMISGFAQN 410
ME+ + + +V L ++ G + +A + ER+ V + ++++G + +
Sbjct: 605 METKYGVVPTAENYACMVDLLARSGYLDEAMALI----ERSPVDPGASLWGALLTGCSIH 660
Query: 411 G---LGE-EALNLFRKMKDEGLVP-NQITFLSVLSACNHVGLVEEGFIYFKSMKTL-YNI 464
G L E A NLFR L P N +L ++S H + +E +MK N
Sbjct: 661 GNLDLAEVAARNLFR------LEPYNSANYLMIMSLYEHEQMYDEADSLKYAMKARGVNT 714
Query: 465 EPG 467
PG
Sbjct: 715 RPG 717
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 141/331 (42%), Gaps = 53/331 (16%)
Query: 3 DRTSASYNAMITALINNNCSIYEAF---EIFATMPMRNAVSYAAMITGFVRRGMFYEAEE 59
D ++N +IT N S +I A N VS+ ++I+G G + ++
Sbjct: 405 DPNVTTWNGLITGYSLNGLSSQAMLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFN 464
Query: 60 LYVNMPARWRDSVCSNALISGYLKVGRCEEAARI----------FEAMVEKDVVAWGSMV 109
+ M +D V +L++ + + C A + + D+V +++
Sbjct: 465 FFKEMQ---KDGV-QPSLVTMLVLLRACAGLALLKKGKELHCFALRRAYDCDMVVGTALI 520
Query: 110 DGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI 169
D Y K G + A+ IF ++ KN+V AM+ G + LF + R G+ +SI
Sbjct: 521 DMYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSI 580
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T T L AC + GL++ G++Y +++ T YG + + + ++
Sbjct: 581 TFTALLTAC----------RSMGLITE-GWEY----FDNMETKYGVVPTAENYACMVDLL 625
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVS-WTTMITGFSSKGNLE----KS 284
++ SGY ++EA L ER P S W ++TG S GNL+ +
Sbjct: 626 AR----------SGY-----LDEAMALIERSPVDPGASLWGALLTGCSIHGNLDLAEVAA 670
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
LF + P + + I+S + + + Y+EA
Sbjct: 671 RNLFRLEP-YNSANYLMIMSLYEHEQMYDEA 700
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 293/564 (51%), Gaps = 43/564 (7%)
Query: 84 VGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
VG CE A + ++ DV + VD + K V A ++F++MPE++ W AM+ G
Sbjct: 674 VGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG 733
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + + F LF MR + +S+T+ L ++ + +H + R G D
Sbjct: 734 FCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ 793
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSK--RDAVSWNSLISGYVHNGEIEEAYRLF--- 257
+ + N+ I+ YG+ G +D A VF + + R VSWNS+ Y GE +A+ L+
Sbjct: 794 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 853
Query: 258 ---ERMPG---------------------------------KDFVSWTTMITGFSSKGNL 281
E P +D + T I+ +S +
Sbjct: 854 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 913
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ LF++M + V+WT +ISG+ +EA F M++ +P+ +TL S++S
Sbjct: 914 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 973
Query: 342 AATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+L G I A + D V I N+L+ +YSKCG++ +A IF N E+ +V++
Sbjct: 974 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 1033
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
+MI+G+A NG+ EAL LF KM D PN ITFL+VL AC H G +E+G+ YF MK
Sbjct: 1034 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 1093
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
+YNI PG +HY+CMVD+LGR G L EA++LI +M+ +P G+WGALL A + H N+ +A+
Sbjct: 1094 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 1153
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
AA+ L LEP A PYV ++++Y+ G R+R K + I+K PG S I + K
Sbjct: 1154 QAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 1213
Query: 581 HLFLAGRKSCLDLKEIEVTLQTIS 604
H F G ++ + I TL +S
Sbjct: 1214 HSFTVGEHGHVENEVIYFTLNGLS 1237
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 180/406 (44%), Gaps = 62/406 (15%)
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
LF M+RGG N+ T + +AC R VH + + F D+ +G + + M+
Sbjct: 645 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 704
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
+ +D A KVF M +RDA +WN+++SG+ +G ++A+ LF M + + +
Sbjct: 705 KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT 764
Query: 275 FSSKGNLEKSIELFNMMP-----------------------------------------E 293
+ EKS++L M +
Sbjct: 765 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 824
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+ V+W ++ + + +AF + MLR++ +P+ T ++ ++ TL QG I
Sbjct: 825 RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLI 884
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H+H + + + D+ N+ +S+YSK + A +F + R VS+ MISG+A+ G
Sbjct: 885 HSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM 944
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
+EAL LF M G P+ +T LS++S C G +E G K + +I Y C
Sbjct: 945 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG----KWIDARADI------YGC 994
Query: 474 ----------MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
++D+ + GS+ EA D+ ++ T E W ++
Sbjct: 995 KRDNVMICNALIDMYSKCGSIHEARDIFDN-TPEKTVVTWTTMIAG 1039
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 131/528 (24%), Positives = 226/528 (42%), Gaps = 100/528 (18%)
Query: 11 AMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
A + + N Y A ++F MP R+A ++ AM++GF + G +A L+ M R +
Sbjct: 698 ATVDMFVKCNSVDYAA-KVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM--RLNE 754
Query: 71 SVCSNALISGYLKVGRCEEAARIFEAM--------VEKDVVAWGSMVDGYCKKGRVIEAR 122
+ + ++ E++ ++ EAM V+ V + + Y K G + A+
Sbjct: 755 ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAK 814
Query: 123 EIFDKMP--EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
+F+ + ++ VV+W +M Y D F L+ M R + T L +C
Sbjct: 815 LVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 874
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSL 240
+G +H G D DI N+ I+MY + A +F +M+ R VSW +
Sbjct: 875 PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 934
Query: 241 ISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITG---------------------- 274
ISGY G+++EA LF M D V+ ++I+G
Sbjct: 935 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGC 994
Query: 275 --------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
+S G++ ++ ++F+ PEK VTWT +I+G+ N + EA + F
Sbjct: 995 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFS 1054
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+M+ D +PN +T +VL A A + +L +G + + H++K
Sbjct: 1055 KMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMKQ-------------------- 1093
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
Y I +D Y+ M+ + G EEAL L R M P+ + ++L+
Sbjct: 1094 ----VYNISPGLDH-----YSCMVDLLGRKGKLEEALELIRNM---SAKPDAGIWGALLN 1141
Query: 441 ACN---HVGLVEEGFIYFKSMKTLYNIEP---GPEHYACMVDILGRAG 482
AC +V + E+ + ++L+N+EP P Y M +I AG
Sbjct: 1142 ACKIHRNVKIAEQ------AAESLFNLEPQMAAP--YVEMANIYAAAG 1181
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%)
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W I VN E+ F EM R PN T V A A A + +HAH++
Sbjct: 626 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 685
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K SDV + + V ++ KC +V A ++F + ER+ ++N+M+SGF Q+G ++A +
Sbjct: 686 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 745
Query: 419 LFRKMKDEGLVPNQITFLSVLSACN 443
LFR+M+ + P+ +T ++++ + +
Sbjct: 746 LFREMRLNEITPDSVTVMTLIQSAS 770
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 10 NAMI-TALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM- 64
N MI ALI+ + C SI+EA +IF P + V++ MI G+ G+F EA +L+ M
Sbjct: 998 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 1057
Query: 65 -----PARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCK 114
P + + A++ G E+ F M + + + MVD +
Sbjct: 1058 DLDYKP----NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 1113
Query: 115 KGRVIEAREIFDKMPEK-NVVAWTAMVDG 142
KG++ EA E+ M K + W A+++
Sbjct: 1114 KGKLEEALELIRNMSAKPDAGIWGALLNA 1142
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 267/488 (54%), Gaps = 37/488 (7%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
+F ++ N ++A++ Y + F L+ SM ++ S T + LF
Sbjct: 68 LFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSL---LKN 124
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISG 243
G Q+H FGF D+ +GN+II MY + G +D A
Sbjct: 125 PSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCAR-------------------- 164
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
++F+ MP +D V+WT +I ++ G+++ + ELF +P KD V WT+++
Sbjct: 165 -----------KVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMV 213
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH--AHVVKMN 361
+G+ N ++A ++F +M V +++TL +SA A I A +
Sbjct: 214 TGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESSRFG 273
Query: 362 MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFR 421
S+V + ++L+ +YSKCGNV +AY +F + E N+ SY+SMI GFA +G A+ LF
Sbjct: 274 SGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFY 333
Query: 422 KMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRA 481
+M + G+ PN +TF+ + +AC+H G+VE+G F +MK Y + P +HYACM D+LGRA
Sbjct: 334 EMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRA 393
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLS 541
G L +A+ L+ +M EP GVWGALLGA H N D+A++A++ L ELEPD+ Y++LS
Sbjct: 394 GHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLS 453
Query: 542 DLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK-VHLFLAGRKSCLDLKEIEVTL 600
Y++ K D +RVR + K++RK+PGCSW+ K+ +H F AG ++ EI+ L
Sbjct: 454 KTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKAL 513
Query: 601 QTISKGTK 608
+ + K
Sbjct: 514 DDLLQRLK 521
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARW-------------- 68
+F+ + N Y+A+I + R G F+ + LY +M P +
Sbjct: 68 LFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSL 127
Query: 69 --------------RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
D N +I Y+K G + A ++F+ M +DVV W ++ Y +
Sbjct: 128 GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYAR 187
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
G + A E+F +P K++VAWT+MV GY + + F MR G+ + ITL
Sbjct: 188 SGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGA 247
Query: 175 FEACGRF--FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
AC + Y + ++ SRFG ++ +G+++I MY + G ++EA VF M +
Sbjct: 248 ISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEM 307
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEKSIELF 288
+ S++S+I G+ +G A +LF M + V++ + T S G +E+ +LF
Sbjct: 308 NVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLF 367
Query: 289 NMMPEKDDVTWTA 301
M E V+ TA
Sbjct: 368 GAMKECYGVSPTA 380
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV-VDAYR--IFTNIDERNIVSYNS 402
TLN Q+HAH+ + N+ + +L+ + ++ V Y +F+ + N Y++
Sbjct: 23 TLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSA 82
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLS 440
+I +A+NG ++ L+ M + + P TF ++ S
Sbjct: 83 LIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFS 120
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,102,040,974
Number of Sequences: 23463169
Number of extensions: 426001386
Number of successful extensions: 1257709
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9496
Number of HSP's successfully gapped in prelim test: 2485
Number of HSP's that attempted gapping in prelim test: 982104
Number of HSP's gapped (non-prelim): 75342
length of query: 649
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 500
effective length of database: 8,863,183,186
effective search space: 4431591593000
effective search space used: 4431591593000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)