BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006343
(649 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/606 (59%), Positives = 463/606 (76%), Gaps = 1/606 (0%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R + SYNAMITA+I N C + +A+E+F +P +NAVSYA MITGFVR G F EAE L
Sbjct: 107 MPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFL 166
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y P ++RDSV SN L+SGYL+ G+ EA R+F+ M K+VV+ SMV GYCK GR+++
Sbjct: 167 YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRR-GGMAFNSITLTILFEACG 179
AR +FD+M E+NV+ WTAM+DGY K FEDGF LFL MR+ G + NS TL ++F+AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F RYREG Q+HGLVSR ++D+ LGNS+++MY +LG+M EA VF +M +D+VSWNS
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
LI+G V +I EAY LFE+MPGKD VSWT MI GFS KG + K +ELF MMPEKD++TW
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITW 406
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TA+IS FV+N YEEA WF +ML+K+V PN T SSVLSA+A+ A L +G QIH VVK
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK 466
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
MN+ +D+S+QNSLVS+Y KCGN DAY+IF+ I E NIVSYN+MISG++ NG G++AL L
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKL 526
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F ++ G PN +TFL++LSAC HVG V+ G+ YFKSMK+ YNIEPGP+HYACMVD+LG
Sbjct: 527 FSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLG 586
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
R+G L +A +LI++M +P GVWG+LL A +THL +DLA+LAA+ L+ELEPDSATPYVV
Sbjct: 587 RSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVV 646
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
LS LYS+IGK RD +R+ KK KRI+K PG SWIILK +VH FLAG +S L+L+EI T
Sbjct: 647 LSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFT 706
Query: 600 LQTISK 605
L+ I K
Sbjct: 707 LKMIRK 712
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 214/446 (47%), Gaps = 74/446 (16%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+ IS + + G +EA IF M + +V+W +M+ Y + G++ +A ++FD+MP +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 135 AWTAMVDGYMKVDC-FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
++ AM+ +K C ++LF + N+++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYA--------------------- 148
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVF--SMMSKRDAVSWNSLISGYVHNGEIE 251
++IT + R G DEA ++ + + RD+V+ N L+SGY+ G+
Sbjct: 149 --------------TMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWN 194
Query: 252 EAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
EA R+F+ M K+ VS ++M+ G+ G + + LF+ M E++ +TWTA+I G+
Sbjct: 195 EAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGF 254
Query: 312 YEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+E+ F F+ M ++ DV+ N TL+ + A +GSQIH V +M +E D+ + N
Sbjct: 255 FEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGN 314
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE---- 426
SL+S+YSK G + +A +F + ++ VS+NS+I+G Q EA LF KM +
Sbjct: 315 SLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVS 374
Query: 427 ---------------------GLVP--NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
G++P + IT+ +++SA G EE +F M
Sbjct: 375 WTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM---LQ 431
Query: 464 IEPGPEHYACMVDILGRAGSLAEAID 489
E P Y +L SLA+ I+
Sbjct: 432 KEVCPNSYT-FSSVLSATASLADLIE 456
>sp|P0C7R0|PPR69_ARATH Pentatricopeptide repeat-containing protein At1g32415,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E56 PE=2
SV=1
Length = 761
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/601 (40%), Positives = 371/601 (61%), Gaps = 21/601 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVN 63
+ S+ M+TAL ++ S +A E+F MP RN VS+ ++TG +R G +A++++
Sbjct: 136 KNVVSWTVMLTALCDDGRS-EDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDA 194
Query: 64 MPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEARE 123
MP+R D V NA+I GY++ EEA +F M EK+VV W SMV GYC+ G V EA
Sbjct: 195 MPSR--DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYR 252
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG--GMAFNSITLTILFEACGRF 181
+F +MPE+N+V+WTAM+ G+ + + + LFL M++ ++ N TL L ACG
Sbjct: 253 LFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGL 312
Query: 182 ---FRYREGVQVHGLVSRFGF---DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAV 235
FR R G Q+H V G+ D+D L S++ MY G + A + + D
Sbjct: 313 GVEFR-RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQ 369
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPG-KDFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
S N +I+ Y+ NG++E A LFER+ D VSWT+MI G+ G++ ++ LF + +K
Sbjct: 370 SCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK 429
Query: 295 DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIH 354
D VTWT +ISG V NE + EA +M+R ++P T S +LS++ AT+ L+QG IH
Sbjct: 430 DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH 489
Query: 355 AHVVKMNM--ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGL 412
+ K + D+ +QNSLVS+Y+KCG + DAY IF + +++ VS+NSMI G + +GL
Sbjct: 490 CVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGL 549
Query: 413 GEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYA 472
++ALNLF++M D G PN +TFL VLSAC+H GL+ G FK+MK Y+I+PG +HY
Sbjct: 550 ADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI 609
Query: 473 CMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG-AGRTHLNLD---LAKLAAQHLME 528
M+D+LGRAG L EA + I+++ F P V+GALLG G + D +A+ AA L+E
Sbjct: 610 SMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLE 669
Query: 529 LEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
L+P +A +V L ++Y+ +G+ +R + +K ++K+PGCSW+++ + ++FL+G K
Sbjct: 670 LDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDK 729
Query: 589 S 589
S
Sbjct: 730 S 730
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 229/513 (44%), Gaps = 99/513 (19%)
Query: 23 IYEAFEIFATMPMRNAVS----YAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI 78
+ A + +P R +++ + ++++ + + G EA L+ MP R + V NA++
Sbjct: 58 LVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER--NIVTCNAML 115
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
+GY+K R EA +F M K+VV+W M+ C GR +A E+FD+MPE+NVV+W
Sbjct: 116 TGYVKCRRMNEAWTLFREM-PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNT 174
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
+V G ++ E +F +M SR
Sbjct: 175 LVTGLIRNGDMEKAKQVFDAMP----------------------------------SR-- 198
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
D++ N++I Y M+EA +F MS+++ V+W S++ GY G++ EAYRLF
Sbjct: 199 ---DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFC 255
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
MP ++ VSWT MI+GF+ W NE Y EA
Sbjct: 256 EMPERNIVSWTAMISGFA----------------------W---------NELYREALML 284
Query: 319 FIEMLRKD---VRPNQLTLSSVLSASAATAT--LNQGSQIHAHVVKMNMES---DVSIQN 370
F+EM +KD V PN TL S+ A G Q+HA V+ E+ D +
Sbjct: 285 FLEM-KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAK 343
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
SLV +Y+ G + A + + ++ S N +I+ + +NG E A LF ++K +
Sbjct: 344 SLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFERVKS---LH 398
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
+++++ S++ G V F F+ + + + M+ L + AEA L
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----WTVMISGLVQNELFAEAASL 453
Query: 491 INSMT---FEPPPGVWGALLGAGRTHLNLDLAK 520
++ M +P + LL + NLD K
Sbjct: 454 LSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 148/272 (54%), Gaps = 16/272 (5%)
Query: 183 RYREGVQVHGL-----VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
R EG VH + + G ++ S+++ Y + G++DEA +F +M +R+ V+
Sbjct: 52 RLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTC 111
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N++++GYV + EA+ LF MP K+ VSWT M+T G E ++ELF+ MPE++ V
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV 170
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+W +++G + N E+A + F M +DV + + N G + +
Sbjct: 171 SWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIE--------NDGMEEAKLL 222
Query: 358 VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
E +V S+V Y + G+V +AYR+F + ERNIVS+ +MISGFA N L EAL
Sbjct: 223 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREAL 282
Query: 418 NLFRKMKD--EGLVPNQITFLSVLSACNHVGL 447
LF +MK + + PN T +S+ AC +G+
Sbjct: 283 MLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/565 (38%), Positives = 352/565 (62%), Gaps = 11/565 (1%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I+EA ++F + ++ S+ +M+ G+ M +A +L+ MP R + + N L+SGY+
Sbjct: 33 IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR--NIISWNGLVSGYM 90
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
K G +EA ++F+ M E++VV+W ++V GY G+V A +F KMPEKN V+WT M+ G
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIG 150
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+++ +D L+ + ++I T + + R E ++ +S +
Sbjct: 151 FLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMS----ERS 202
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
+I +++T YG+ +D+A K+F +M ++ VSW S++ GYV NG IE+A LFE MP
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV 262
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K ++ MI+G KG + K+ +F+ M E++D +W +I N EA FI M
Sbjct: 263 KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
++ VRP TL S+LS A+ A+L+ G Q+HA +V+ + DV + + L+++Y KCG +
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSA 441
V + IF ++I+ +NS+ISG+A +GLGEEAL +F +M G PN++TF++ LSA
Sbjct: 383 VKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Query: 442 CNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG 501
C++ G+VEEG ++SM++++ ++P HYACMVD+LGRAG EA+++I+SMT EP
Sbjct: 443 CSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAA 502
Query: 502 VWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
VWG+LLGA RTH LD+A+ A+ L+E+EP+++ Y++LS++Y+ G+ D +R K
Sbjct: 503 VWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMK 562
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAG 586
+ +RKSPGCSW +++KVH F G
Sbjct: 563 TRLVRKSPGCSWTEVENKVHAFTRG 587
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 246/547 (44%), Gaps = 95/547 (17%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M DR S+N +++ + N I EA ++F MP RN VS+ A++ G+V G AE L
Sbjct: 74 MPDRNIISWNGLVSGYMKNG-EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESL 132
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP ++ V ++ G+L+ GR ++A +++E + +KD +A SM+ G CK+GRV E
Sbjct: 133 FWKMPE--KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDE 190
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACG 179
AREIFD+M E++V+ WT MV GY + + +D +F M + +++ S+ + + G
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG--YVQNG 248
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
R E +V + +I N++I+ G+ G + +A +VF M +R+ SW +
Sbjct: 249 RIEDAEELFEVMPV-------KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301
Query: 240 LISGYVHNGEIEEAYRLFERMPGK------------------------------------ 263
+I + NG EA LF M +
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 264 ---DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
D + ++T + G L KS +F+ P KD + W +IISG+ ++ EEA + F
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 321 EM-LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
EM L +PN++T + LSA + + +G +I+ +MES ++
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE-----SMESVFGVKP--------- 467
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+ A+ Y M+ + G EA+ + M E P+ + S+L
Sbjct: 468 ---ITAH-------------YACMVDMLGRAGRFNEAMEMIDSMTVE---PDAAVWGSLL 508
Query: 440 SAC-NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL----GRAGSLAEAIDLINSM 494
AC H L F K L IEP ++ + GR +AE L+ +
Sbjct: 509 GACRTHSQLDVAEF----CAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
Query: 495 TFEPPPG 501
PG
Sbjct: 565 LVRKSPG 571
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 161/291 (55%), Gaps = 21/291 (7%)
Query: 206 GNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF 265
N IT R+G + EA K+F + SWNS+++GY N +A +LF+ MP ++
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+SW +++G+ G ++++ ++F++MPE++ V+WTA++ G+V+N + + A F +M K
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
N+++ + +L ++ +++ +M + D + S++ K G V +A
Sbjct: 140 ----NKVSWTVMLIGFLQDGRIDDACKLY----EMIPDKDNIARTSMIHGLCKEGRVDEA 191
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
IF + ER+++++ +M++G+ QN ++A +F M ++ ++++ S+L +
Sbjct: 192 REIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSML-----M 242
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSM 494
G V+ G I + + L+ + P AC M+ LG+ G +A+A + +SM
Sbjct: 243 GYVQNGRI--EDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSM 291
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/593 (37%), Positives = 346/593 (58%), Gaps = 41/593 (6%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV 84
EA +F MP ++VSY MI+G++R G F A +L+ MP R D V N +I GY++
Sbjct: 82 EALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER--DLVSWNVMIKGYVRN 139
Query: 85 GRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
+A +FE M E+DV +W +M+ GY + G V +AR +FD+MPEKN V+W A++ Y+
Sbjct: 140 RNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYV 199
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDII 204
+ E+ LF S R A S + G F + ++ V+ D++
Sbjct: 200 QNSKMEEACMLFKS--RENWALVSWNCLL-----GGFVKKKKIVEARQFFDSMNV-RDVV 251
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD 264
N+IIT Y + G +DEA ++F +D +W +++SGY+ N +EEA LF++MP ++
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN 311
Query: 265 FVSWT-------------------------------TMITGFSSKGNLEKSIELFNMMPE 293
VSW TMITG++ G + ++ LF+ MP+
Sbjct: 312 EVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+D V+W A+I+G+ + EA R F++M R+ R N+ + SS LS A L G Q+
Sbjct: 372 RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H +VK E+ + N+L+ +Y KCG++ +A +F + ++IVS+N+MI+G++++G G
Sbjct: 432 HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFG 491
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
E AL F MK EGL P+ T ++VLSAC+H GLV++G YF +M Y + P +HYAC
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 474 MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDS 533
MVD+LGRAG L +A +L+ +M FEP +WG LLGA R H N +LA+ AA + +EP++
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 611
Query: 534 ATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ YV+LS+LY+ G+ D ++R++ + K ++K PG SWI +++K H F G
Sbjct: 612 SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVG 664
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 231/482 (47%), Gaps = 63/482 (13%)
Query: 99 EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
+ D+ W + Y + GR EA +F +MP + V++ M+ GY++ FE LF
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
M + ++ ++ + + R R + L + D+ N++++ Y + G
Sbjct: 121 MPERDL----VSWNVMIKG---YVRNRNLGKARELFEIMP-ERDVCSWNTMLSGYAQNGC 172
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRL---------------------- 256
+D+A VF M +++ VSWN+L+S YV N ++EEA L
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 257 ---------FERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
F+ M +D VSW T+ITG++ G ++++ +LF+ P +D TWTA++SG++
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EEA F +M + N+++ +++L+ + ++ + N VS
Sbjct: 293 QNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRN----VS 344
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
N++++ Y++CG + +A +F + +R+ VS+ +MI+G++Q+G EAL LF +M+ EG
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN-IEPGPEHYACMVD-----ILGRA 481
N+ +F S LS C V +E G K L+ + G C V + +
Sbjct: 405 GRLNRSSFSSALSTCADVVALELG-------KQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 482 GSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVV 539
GS+ EA DL M + W ++ H ++A + + L+PD AT V
Sbjct: 458 GSIEEANDLFKEMAGKDIVS-WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 540 LS 541
LS
Sbjct: 517 LS 518
>sp|O04590|PPR88_ARATH Pentatricopeptide repeat-containing protein At1g62260,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E10 PE=2
SV=1
Length = 656
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/588 (37%), Positives = 343/588 (58%), Gaps = 21/588 (3%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRG---MFYEAEEL 60
R + ++N MI+ + + +A ++F MP R+ V++ MI+G+V G EA +L
Sbjct: 69 RNTVTWNTMISGYVKRR-EMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKL 127
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP+R DS N +ISGY K R EA +FE M E++ V+W +M+ G+C+ G V
Sbjct: 128 FDEMPSR--DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDS 185
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLF-----LSMRRGGMAFNSITLTILF 175
A +F KMP K+ A+V G +K + + + L R + + TL + +
Sbjct: 186 AVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGY 245
Query: 176 EACGRFFRYREGVQV--------HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
G+ R HG R F +++ NS+I Y ++G + A +F
Sbjct: 246 GQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFD 305
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
M RD +SWN++I GYVH +E+A+ LF MP +D SW M++G++S GN+E +
Sbjct: 306 QMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHY 365
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F PEK V+W +II+ + N+ Y+EA FI M + +P+ TL+S+LSAS L
Sbjct: 366 FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL 425
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISG 406
G Q+H VVK + DV + N+L+++YS+CG ++++ RIF + +R ++++N+MI G
Sbjct: 426 RLGMQMHQIVVK-TVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG 484
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
+A +G EALNLF MK G+ P+ ITF+SVL+AC H GLV+E F SM ++Y IEP
Sbjct: 485 YAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEP 544
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL 526
EHY+ +V++ G EA+ +I SM FEP VWGALL A R + N+ LA +AA+ +
Sbjct: 545 QMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAM 604
Query: 527 MELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
LEP+S+TPYV+L ++Y+ +G + ++VRM + KRI+K G SW+
Sbjct: 605 SRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 216/542 (39%), Gaps = 147/542 (27%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S S+N MI+ N I EA +F MP RNAVS++AMITGF + G A L
Sbjct: 131 MPSRDSFSWNTMISGYAKNR-RIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVL 189
Query: 61 YVNMPARWRDSVCS-----------------------------------NALISGYLKVG 85
+ MP + +C+ N LI GY + G
Sbjct: 190 FRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRG 249
Query: 86 RCEEAARIFEAMVE---------------KDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
+ E A +F+ + + K+VV+W SM+ Y K G V+ AR +FD+M +
Sbjct: 250 QVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD 309
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFN---------------------- 167
++ ++W M+DGY+ V ED F LF M R ++N
Sbjct: 310 RDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKT 369
Query: 168 ----SITLTILFEACGRFFRYREGVQV-------------HGLVS-----------RFGF 199
+++ + A + Y+E V + H L S R G
Sbjct: 370 PEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGM 429
Query: 200 DY----------DIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNG 248
D+ + N++ITMY R G + E+ ++F M KR+ ++WN++I GY +G
Sbjct: 430 QMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489
Query: 249 EIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVN 308
EA LF M KS ++ +T+ ++++ +
Sbjct: 490 NASEALNLFGSM----------------------KSNGIY-----PSHITFVSVLNACAH 522
Query: 309 NEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
+EA F+ M+ + P SS+++ ++ + I + M E D +
Sbjct: 523 AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYI---ITSMPFEPDKT 579
Query: 368 IQNSLVS---LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
+ +L+ +Y+ G A + ++ + Y + + +A GL +EA + M+
Sbjct: 580 VWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNME 639
Query: 425 DE 426
+
Sbjct: 640 SK 641
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 179/426 (42%), Gaps = 80/426 (18%)
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
R G++ EA +F + R+ V+WN++ISGYV E+ +A +LF+ MP +D V+W TMI+G
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 275 FSSKGN---LEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV---- 327
+ S G LE++ +LF+ MP +D +W +ISG+ N + EA F +M ++
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWS 171
Query: 328 -------------------RPNQLTLSSVLSASAATATLNQGSQIHAHVVKM------NM 362
R + SS L A A N+ A V+
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGR 231
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE---------------RNIVSYNSMISGF 407
E V N+L+ Y + G V A +F I + +N+VS+NSMI +
Sbjct: 232 EDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAY 291
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK-------- 459
+ G A LF +MKD + I++ +++ HV +E+ F F M
Sbjct: 292 LKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWN 347
Query: 460 --------------TLYNIEPGPEHYAC----MVDILGRAGSLAEAIDLINSMTFE---P 498
+ E PE + ++ + EA+DL M E P
Sbjct: 348 MMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKP 407
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
P +LL A +NL L Q +++ + L +YS G+ + R+
Sbjct: 408 DPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFD 467
Query: 559 KKKLKR 564
+ KLKR
Sbjct: 468 EMKLKR 473
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 321/539 (59%), Gaps = 31/539 (5%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N+++SGY G +EA ++F+ M E++VV+W +V GY K ++EAR +F+ MPE+NVV
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC---GRFFRYRE----- 186
+WTAMV GYM+ + LF M N ++ T++F GR + R+
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 187 -------------GVQVHGLV--SRFGFD----YDIILGNSIITMYGRLGFMDEANKVFS 227
G+ G V +R FD +++ ++IT Y + +D A K+F
Sbjct: 168 PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 227
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIEL 287
+M ++ VSW S++ GY +G IE+A FE MP K ++ MI GF G + K+ +
Sbjct: 228 VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRV 287
Query: 288 FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATL 347
F++M ++D+ TW +I + EA F +M ++ VRP+ +L S+LS A A+L
Sbjct: 288 FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 347
Query: 348 NQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGF 407
G Q+HAH+V+ + DV + + L+++Y KCG +V A +F ++I+ +NS+ISG+
Sbjct: 348 QYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGY 407
Query: 408 AQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG 467
A +GLGEEAL +F +M G +PN++T +++L+AC++ G +EEG F+SM++ + + P
Sbjct: 408 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Query: 468 PEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLM 527
EHY+C VD+LGRAG + +A++LI SMT +P VWGALLGA +TH LDLA++AA+ L
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLF 527
Query: 528 ELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
E EPD+A YV+LS + + K D VR + + K PGCSWI + KVH+F G
Sbjct: 528 ENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRG 586
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 179/395 (45%), Gaps = 96/395 (24%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M++R S+N +++ I N I EA +F MP RN VS+ AM+ G+++ GM EAE L
Sbjct: 74 MSERNVVSWNGLVSGYIKNRM-IVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESL 132
Query: 61 YVNMPAR----W-------------------------RDSVCSNALISGYLKVGRCEEAA 91
+ MP R W +D V S +I G + GR +EA
Sbjct: 133 FWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEAR 192
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT-------------- 137
IF+ M E++VV W +M+ GY + RV AR++F+ MPEK V+WT
Sbjct: 193 LIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIED 252
Query: 138 -----------------AMVDGYMKV----------DCFED----------------GF- 153
AM+ G+ +V D ED GF
Sbjct: 253 AEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFE 312
Query: 154 ----DLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
DLF M++ G+ + +L + C + G QVH + R FD D+ + + +
Sbjct: 313 LEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVL 372
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DF 265
+TMY + G + +A VF S +D + WNS+ISGY +G EEA ++F MP +
Sbjct: 373 MTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNK 432
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
V+ ++T S G LE+ +E+F M K VT T
Sbjct: 433 VTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 156/318 (49%), Gaps = 23/318 (7%)
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWT 269
I+ R+G ++EA K F + + SWNS++SGY NG +EA +LF+ M ++ VSW
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+++G+ + ++ +F +MPE++ V+WTA++ G++ EA F M +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER---- 139
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N+++ + + +++ +++ M DV +++ + G V +A IF
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLY----DMMPVKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+ ERN+V++ +MI+G+ QN + A LF M ++ ++++ S+L G +E
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIE 251
Query: 450 EGFIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+ +F+ M P AC M+ G G +++A + + M + W ++
Sbjct: 252 DAEEFFEVM-------PMKPVIACNAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMI 303
Query: 508 GA-GRTHLNLDLAKLAAQ 524
A R L+ L AQ
Sbjct: 304 KAYERKGFELEALDLFAQ 321
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 343/584 (58%), Gaps = 43/584 (7%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
I EA ++F +P R+ V++ +ITG+++ G EA EL+ + +R ++ V A++SGYL
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR-KNVVTWTAMVSGYL 120
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+ + A +F+ M E++VV+W +M+DGY + GR+ +A E+FD+MPE+N+V+W +MV
Sbjct: 121 RSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKA 180
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
++ ++ +LF M R D
Sbjct: 181 LVQRGRIDEAMNLFERMPR---------------------------------------RD 201
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
++ +++ + G +DEA ++F M +R+ +SWN++I+GY N I+EA +LF+ MP
Sbjct: 202 VVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPE 261
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
+DF SW TMITGF + K+ LF+ MPEK+ ++WT +I+G+V N++ EEA F +M
Sbjct: 262 RDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM 321
Query: 323 LRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
LR V+PN T S+LSA + A L +G QIH + K + + + ++L+++YSK G
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 382 VVDAYRIFTN--IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
++ A ++F N + +R+++S+NSMI+ +A +G G+EA+ ++ +M+ G P+ +T+L++L
Sbjct: 382 LIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLL 441
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
AC+H GLVE+G +FK + ++ EHY C+VD+ GRAG L + + IN
Sbjct: 442 FACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLS 501
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
+GA+L A H + +AK + ++E D A YV++S++Y+ GK+ + +RMK
Sbjct: 502 RSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMK 561
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K K ++K PGCSW+ + + HLF+ G KS + ++ L +
Sbjct: 562 MKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDL 605
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 221/467 (47%), Gaps = 73/467 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M +R S+N MI + I +A E+F MP RN VS+ +M+ V+RG EA L
Sbjct: 135 MPERNVVSWNTMIDGYAQSG-RIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNL 193
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP RD V A++ G K G+ +EA R+F+ M E+++++W +M+ GY + R+ E
Sbjct: 194 FERMPR--RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDE 251
Query: 121 ARE-------------------------------IFDKMPEKNVVAWTAMVDGYMKVDCF 149
A + +FD+MPEKNV++WT M+ GY++
Sbjct: 252 ADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKEN 311
Query: 150 EDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
E+ ++F M R G + N T + AC EG Q+H L+S+ + I+ ++
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSA 371
Query: 209 IITMYGRLGFMDEANKVFS--MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF- 265
++ MY + G + A K+F ++ +RD +SWNS+I+ Y H+G +EA ++ +M F
Sbjct: 372 LLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFK 431
Query: 266 ---VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
V++ ++ S G +EK +E F + + + EE + +++
Sbjct: 432 PSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLR------------EEHYTCLVDL 479
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG-N 381
+ R +T + + A + G+ + A N+ ++VSI +V + G +
Sbjct: 480 CGRAGRLKDVT-NFINCDDARLSRSFYGAILSA----CNVHNEVSIAKEVVKKVLETGSD 534
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
Y + +NI +A NG EEA + KMK++GL
Sbjct: 535 DAGTYVLMSNI--------------YAANGKREEAAEMRMKMKEKGL 567
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 115/214 (53%), Gaps = 32/214 (14%)
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMM-PEKDDVT 298
LI G+I EA +LF+ +P +D V+WT +ITG+ G++ ++ ELF+ + K+ VT
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
WTA++SG++ ++Q A F EM ++V ++ ++++ A + +++ ++ +
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 359 KMNMES---------------------------DVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+ N+ S DV ++V +K G V +A R+F
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+ ERNI+S+N+MI+G+AQN +EA LF+ M +
Sbjct: 228 MPERNIISWNAMITGYAQNNRIDEADQLFQVMPE 261
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 362 bits (929), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 315/624 (50%), Gaps = 81/624 (12%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
N LI Y K G E+ ++F+ M ++++ W S+V G K G + EA +F MPE++
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
W +MV G+ + D E+ F M + G N + + AC +GVQVH L+
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 195 SRFGFDYDIILG-------------------------------NSIITMYGRLGFMDEAN 223
++ F D+ +G NS+IT + + G EA
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 224 KVFSMMS----------------------------------------KRDAVSWNSLISG 243
VF MM + D + N+ +
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 244 YVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
Y I+EA +F+ MP ++ ++ T+MI+G++ + + + +F M E++ V+W A+I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM- 362
+G+ N + EEA F + R+ V P + +++L A A A L+ G Q H HV+K
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 363 -----ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEAL 417
E D+ + NSL+ +Y KCG V + Y +F + ER+ VS+N+MI GFAQNG G EAL
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDI 477
LFR+M + G P+ IT + VLSAC H G VEEG YF SM + + P +HY CMVD+
Sbjct: 479 ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL 538
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
LGRAG L EA +I M +P +WG+LL A + H N+ L K A+ L+E+EP ++ PY
Sbjct: 539 LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPY 598
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
V+LS++Y+ +GK D VR + + + K PGCSWI ++ H+F+ KS K+I
Sbjct: 599 VLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIH 658
Query: 598 VTLQTISKGTKEFDWPKHDWSLLG 621
L + + P+ D + +G
Sbjct: 659 SLLDILIAEMR----PEQDHTEIG 678
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 177/380 (46%), Gaps = 36/380 (9%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M DR S+N++IT N ++ EA ++F M + V+ A++I+
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAV-EALDVFQMMLESRVEPDEVTLASVISACASLSAIKV 271
Query: 57 AEELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYC 113
+E++ V D + SNA + Y K R +EA IF++M ++V+A SM+ GY
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 331
Query: 114 KKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTI 173
AR +F KM E+NVV+W A++ GY + E+ LF ++R + +
Sbjct: 332 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 391
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDY------DIILGNSIITMYGRLGFMDEANKVFS 227
+ +AC G+Q H V + GF + DI +GNS+I MY + G ++E VF
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM----PGKDFVSWTTMITGFSSKGNLEK 283
M +RD VSWN++I G+ NG EA LF M D ++ +++ G +E+
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 284 SIELFNMM-------PEKDDVTWTAII---SGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
F+ M P +D T + +GF+ EEA EM ++P+ +
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFL-----EEAKSMIEEM---PMQPDSVI 563
Query: 334 LSSVLSASAATATLNQGSQI 353
S+L+A + G +
Sbjct: 564 WGSLLAACKVHRNITLGKYV 583
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 360 bits (925), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/539 (36%), Positives = 308/539 (57%), Gaps = 41/539 (7%)
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK-KGRVI 119
Y+ P+ N +I+ ++ G + A R+F M K+ + W S++ G K R++
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EA ++FD++PE + ++ M+ Y++ + FE
Sbjct: 111 EAHQLFDEIPEPDTFSYNIMLSCYVR--------------------------NVNFEKAQ 144
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
FF R F D N++IT Y R G M++A ++F M +++ VSWN+
Sbjct: 145 SFF------------DRMPFK-DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELF-NMMPEKDDVT 298
+ISGY+ G++E+A F+ P + V+WT MITG+ +E + +F +M K+ VT
Sbjct: 192 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W A+ISG+V N + E+ + F ML + +RPN LSS L + + L G QIH V
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K + +DV+ SL+S+Y KCG + DA+++F + ++++V++N+MISG+AQ+G ++AL
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LFR+M D + P+ ITF++VL ACNH GLV G YF+SM Y +EP P+HY CMVD+L
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GRAG L EA+ LI SM F P V+G LLGA R H N++LA+ AA+ L++L +A YV
Sbjct: 432 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 491
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIE 597
L+++Y+ + D RVR + K + K PG SWI +++KVH F + + +L I
Sbjct: 492 QLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 202/441 (45%), Gaps = 51/441 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M + + ++N+++ + + + EA ++F +P + SY M++ +VR F +A+
Sbjct: 87 MRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSF 146
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
+ MP ++D+ N +I+GY + G E+A +F +M+EK+ V+W +M+ GY + G + +
Sbjct: 147 FDRMP--FKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEK 204
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCF------------------------------- 149
A F P + VVAWTAM+ GYMK
Sbjct: 205 ASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSR 264
Query: 150 -EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
EDG LF +M G+ NS L+ C + G Q+H +VS+ D+ S
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS 324
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----D 264
+I+MY + G + +A K+F +M K+D V+WN++ISGY +G ++A LF M D
Sbjct: 325 LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 384
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMM-------PEKDDVTWTAIISGFVNNEQYEEAFR 317
++++ ++ + G + + F M P+ D +T ++ + EEA +
Sbjct: 385 WITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH--YTCMVDLLGRAGKLEEALK 442
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
M RP+ ++L A + ++++N ++ L ++Y+
Sbjct: 443 LIRSM---PFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQ-LANIYA 498
Query: 378 KCGNVVDAYRIFTNIDERNIV 398
D R+ + E N+V
Sbjct: 499 SKNRWEDVARVRKRMKESNVV 519
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 358 bits (920), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 186/515 (36%), Positives = 293/515 (56%), Gaps = 32/515 (6%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
+++ SN LI Y+K G+ +A ++F+ M +++ +W +MV GY K G ++ AR +FD MP
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP 140
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E++VV+W MV GY + + + RR G+ FN + L AC + + + Q
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQ 200
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
HG V GF +++L SII Y + G +
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCG-------------------------------Q 229
Query: 250 IEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
+E A R F+ M KD WTT+I+G++ G++E + +LF MPEK+ V+WTA+I+G+V
Sbjct: 230 MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQ 289
Query: 310 EQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
A F +M+ V+P Q T SS L ASA+ A+L G +IH ++++ N+ + +
Sbjct: 290 GSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI 349
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDER-NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
+SL+ +YSK G++ + R+F D++ + V +N+MIS AQ+GLG +AL + M +
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 429 VPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
PN+ T + +L+AC+H GLVEEG +F+SM + I P EHYAC++D+LGRAG E +
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELM 469
Query: 489 DLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIG 548
I M FEP +W A+LG R H N +L K AA L++L+P+S+ PY++LS +Y+ G
Sbjct: 470 RKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHG 529
Query: 549 KKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLF 583
K ++R K +R+ K SWI ++ KV F
Sbjct: 530 KWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAF 564
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 178/420 (42%), Gaps = 70/420 (16%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEA--- 57
M R S+N M++ + + + A +F +MP R+ VS+ M+ G+ + G +EA
Sbjct: 108 MHLRNLYSWNNMVSGYVKSG-MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWF 166
Query: 58 --------------------------EELYVNMPARWR--------DSVCSNALISGYLK 83
+L +N A + + V S ++I Y K
Sbjct: 167 YKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK 226
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
G+ E A R F+ M KD+ W +++ GY K G + A ++F +MPEKN V+WTA++ GY
Sbjct: 227 CGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 144 MKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDI 203
++ DLF M G+ T + A R G ++HG + R +
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNA 346
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMM-SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
I+ +S+I MY + G ++ + +VF + K D V WN++IS +G +A R+ + M
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
F + P + T I++ ++ EE RWF M
Sbjct: 407 -------------------------FRVQPNR--TTLVVILNACSHSGLVEEGLRWFESM 439
Query: 323 -LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
++ + P+Q + ++ ++ + +M E D I N+++ + GN
Sbjct: 440 TVQHGIVPDQEHYACLIDLLGRAGCFK---ELMRKIEEMPFEPDKHIWNAILGVCRIHGN 496
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 32/174 (18%)
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV-VK 359
+ +S + +A + ++ +R L+S+L T +L QG IH H+ +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-------------------------- 393
+ + N L+ +Y KCG +DA ++F +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 394 -----ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
ER++VS+N+M+ G+AQ+G EAL +++ + G+ N+ +F +L+AC
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTAC 189
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 222/665 (33%), Positives = 355/665 (53%), Gaps = 66/665 (9%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNA-LISG 80
S+ A ++F M RNAV+ ++ G VR+ EA +L+++M + S S L+S
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 81 Y----------LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPE 130
+ LK GR I +V+ V +V+ Y K G + +AR +F M +
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 131 KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV 190
K+ V+W +M+ G + CF + + + SMRR + S TL +C + G Q+
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE- 249
HG + G D ++ + N+++T+Y G+++E K+FS M + D VSWNS+I +
Sbjct: 438 HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERS 497
Query: 250 IEEAYRLF---ERMPGK------------------------------------DFVSWTT 270
+ EA F +R K + +
Sbjct: 498 LPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENA 557
Query: 271 MITGFSSKGNLEKSIELFNMMPEK-DDVTWTAIISGFVNNEQYEEAFR--WFIEMLRKDV 327
+I + G ++ ++F+ M E+ D+VTW ++ISG+++NE +A WF ML+
Sbjct: 558 LIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWF--MLQTGQ 615
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
R + ++VLSA A+ ATL +G ++HA V+ +ESDV + ++LV +YSKCG + A R
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHVG 446
F + RN S+NSMISG+A++G GEEAL LF MK +G P+ +TF+ VLSAC+H G
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 447 LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
L+EEGF +F+SM Y + P EH++CM D+LGRAG L + D I M +P +W +
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795
Query: 507 LGA-----GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKK 561
LGA GR +L K AA+ L +LEP++A YV+L ++Y+ G+ D + R K K
Sbjct: 796 LGACCRANGR---KAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMK 852
Query: 562 LKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLL 620
++K G SW+ +KD VH+F+AG KS D I L+ +++ ++ + P+ ++L
Sbjct: 853 DADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALY 912
Query: 621 GLERD 625
LE++
Sbjct: 913 DLEQE 917
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 230/473 (48%), Gaps = 61/473 (12%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
+R+++ ++KDV ++++ Y + G + AR++FD+MP +N V+W +V GY + +
Sbjct: 25 SRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHK 84
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEAC------GRFFRYREGVQVHGLVSRFGFDYDII 204
+ M + G+ N + AC G F G Q+HGL+ + + D +
Sbjct: 85 EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF----GRQIHGLMFKLSYAVDAV 140
Query: 205 LGNSIITMYGR-LGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM--- 260
+ N +I+MY + +G + A F + +++VSWNS+IS Y G+ A+R+F M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 261 ---PGK-----------------------------------DFVSWTTMITGFSSKGNLE 282
P + D + +++ F+ G+L
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQ--LTLSSVLS 339
+ ++FN M ++ VT ++ G V + EEA + F++M DV P + LSS
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE 320
Query: 340 ASAATAT-LNQGSQIHAHVVKMNM-ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
S A L +G ++H HV+ + + V I N LV++Y+KCG++ DA R+F + +++
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFK 456
VS+NSMI+G QNG EA+ ++ M+ ++P T +S LS+C + + G I+ +
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
S+K ++ + ++ + G L E + +SM E W +++GA
Sbjct: 441 SLKLGIDLNVSVSN--ALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 222/490 (45%), Gaps = 73/490 (14%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N +I A + S+ A ++F MP+RN VS+A +++G+ R G E +E V + +
Sbjct: 40 NNLINAYLETGDSV-SARKVFDEMPLRNCVSWACIVSGYSRNG---EHKEALVFLRDMVK 95
Query: 70 DSVCSNALISGYLKVGR-CEEAARI------------FEAMVEKDVVAWGSMVDGYCKK- 115
+ + SN ++ V R C+E + F+ D V ++ Y K
Sbjct: 96 EGIFSNQY--AFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL-TIL 174
G V A F + KN V+W +++ Y + F +F SM+ G T +++
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 175 FEACGRF---FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
AC R E Q+ + + G D+ +G+ +++ + + G + A KVF+ M
Sbjct: 214 TTACSLTEPDVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET 271
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM------------------------------P 261
R+AV+ N L+ G V EEA +LF M
Sbjct: 272 RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKK 331
Query: 262 GKDFVSWTTMITG---------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
G++ V + TG ++ G++ + +F M +KD V+W ++I+G
Sbjct: 332 GRE-VHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL 390
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N + EA + M R D+ P TL S LS+ A+ G QIH +K+ ++ +V
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 450
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG-EEALNLFRKMKD 425
S+ N+L++LY++ G + + +IF+++ E + VS+NS+I A++ EA+ F +
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR 510
Query: 426 EGLVPNQITF 435
G N+ITF
Sbjct: 511 AGQKLNRITF 520
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 174/401 (43%), Gaps = 86/401 (21%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATM----------PMRNAVSYAAMITGFVR 50
M D+ S S+N+MIT L N C I EA E + +M + +++S A + + +
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFI-EAVERYKSMRRHDILPGSFTLISSLSSCASLK-WAK 432
Query: 51 RGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVD 110
G E L + + + SNAL++ Y + G E +IF +M E D V+W S++
Sbjct: 433 LGQQIHGESLKLGIDL---NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIG 489
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSIT 170
+ R +PE V FL+ +R G N IT
Sbjct: 490 ALARSER---------SLPEAVVC---------------------FLNAQRAGQKLNRIT 519
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ + A G Q+HGL + + N++I YG+ G MD K+FS M+
Sbjct: 520 FSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMA 579
Query: 231 -KRDAVSWNSLISGYVHNGEIEEAYRL--FERMPGK--DFVSWTTMITGFSSKGNLEKSI 285
+RD V+WNS+ISGY+HN + +A L F G+ D + T+++ F+S LE+ +
Sbjct: 580 ERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGM 639
Query: 286 EL-----------------------------------FNMMPEKDDVTWTAIISGFVNNE 310
E+ FN MP ++ +W ++ISG+ +
Sbjct: 640 EVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHG 699
Query: 311 QYEEAFRWFIEM-LRKDVRPNQLTLSSVLSASAATATLNQG 350
Q EEA + F M L P+ +T VLSA + L +G
Sbjct: 700 QGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 129/304 (42%), Gaps = 45/304 (14%)
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + + D D+ L N++I Y G A KVF M R+ VSW ++SGY NGE
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 251 EEAYRLFERMPGKD-------FVS--------------WTTMITGFSSK----------- 278
+EA M + FVS + I G K
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 279 ----------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
G++ ++ F + K+ V+W +IIS + AFR F M R
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 329 PNQLTLSSVLSASAATAT--LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
P + T S+++ + + + QI + K + +D+ + + LVS ++K G++ A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
++F ++ RN V+ N ++ G + GEEA LF M V + +++ +LS+
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE-SYVILLSSFPEYS 322
Query: 447 LVEE 450
L EE
Sbjct: 323 LAEE 326
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H+ + K ++ DV + N+L++ Y + G+ V A ++F + RN VS+ ++SG+++NG
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+EAL R M EG+ NQ F+SVL AC +G V G ++ + + L
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV--GILFGRQIHGL 129
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 345 bits (885), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 211/584 (36%), Positives = 313/584 (53%), Gaps = 47/584 (8%)
Query: 74 SNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
SN ++ Y K GR A F + E +V ++ +V Y K ++ AR++FD++P+ +
Sbjct: 46 SNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDT 105
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V++ ++ GY LF MR+ G + TL+ L AC R Q+H
Sbjct: 106 VSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCF 163
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK-RDAVSWNSLISGYVHNGEIEE 252
GFD + N+ +T Y + G + EA VF M + RD VSWNS+I Y + E +
Sbjct: 164 SVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAK 223
Query: 253 AYRLFERMPGKDF--------------VSWTTMITGFSSKGNLEK--------------- 283
A L++ M K F S +I G G L K
Sbjct: 224 ALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLID 283
Query: 284 -------------SIELFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEMLRKDVRP 329
S ++F + D V W +ISG+ NE+ EEA + F +M R RP
Sbjct: 284 FYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP 343
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRI 388
+ + V SA + ++ +Q QIH +K ++ S+ +S+ N+L+SLY K GN+ DA +
Sbjct: 344 DDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWV 403
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + E N VS+N MI G+AQ+G G EAL L+++M D G+ PN+ITF++VLSAC H G V
Sbjct: 404 FDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKV 463
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
+EG YF +MK + IEP EHY+CM+D+LGRAG L EA I++M ++P W ALLG
Sbjct: 464 DEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG 523
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKS 568
A R H N+ LA+ AA LM ++P +ATPYV+L+++Y+ K + VR + KRIRK
Sbjct: 524 ACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKK 583
Query: 569 PGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDW 612
PGCSWI +K K H+F+A S ++E+ L+ + K K+ +
Sbjct: 584 PGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGY 627
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 185/435 (42%), Gaps = 61/435 (14%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
SYN ++ A ++ I+ A ++F +P + VSY +I+G+ + A L+ M
Sbjct: 76 SYNVIVKAYAKDS-KIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKL 134
Query: 68 W--RDSVCSNALISG------YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
D + LI+ +K C + F++ + + V Y K G +
Sbjct: 135 GFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVN----NAFVTYYSKGGLLR 190
Query: 120 EAREIFDKMPE-KNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EA +F M E ++ V+W +M+ Y + L+ M G + TL + A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD---EANKVFSMMSKRDAV 235
G Q HG + + GF + +G+ +I Y + G D ++ KVF + D V
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 236 SWNSLISGYVHNGEI-EEAYRLFERM------PGK-DFVSWTTMITGFSS---------- 277
WN++ISGY N E+ EEA + F +M P FV T+ + SS
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 278 -----------------------KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
GNL+ + +F+ MPE + V++ +I G+ + E
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK--MNMESDVSIQNSL 372
A + ML + PN++T +VLSA A +++G Q + + +K +E + + +
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG-QEYFNTMKETFKIEPEAEHYSCM 489
Query: 373 VSLYSKCGNVVDAYR 387
+ L + G + +A R
Sbjct: 490 IDLLGRAGKLEEAER 504
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 139/332 (41%), Gaps = 73/332 (21%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G +H L + L N + +Y + G + A F + + S+N ++ Y
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMP----EKDDVTWTAI 302
+ +I A +LF+ +P D VS+ T+I+G++ ++ LF M E D T + +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 303 IS-------------------GF-----VNNE---------QYEEAFRWFIEM--LRKDV 327
I+ GF VNN EA F M LR +V
Sbjct: 147 IAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV 206
Query: 328 RPNQLTLS------------------------------SVLSASAATATLNQGSQIHAHV 357
N + ++ SVL+A + L G Q H +
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL 266
Query: 358 VKMNMESDVSIQNSLVSLYSKCG---NVVDAYRIFTNIDERNIVSYNSMISGFAQN-GLG 413
+K + + + L+ YSKCG + D+ ++F I ++V +N+MISG++ N L
Sbjct: 267 IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELS 326
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
EEA+ FR+M+ G P+ +F+ V SAC+++
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T +L S A L G +HA VK + S + N V+LYSKCG + A F +
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
+E N+ SYN ++ +A+ + +++ R++ DE P+ +++ +++S
Sbjct: 70 EEPNVFSYNVIVKAYAK----DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAM 125
Query: 453 IYFKSMKTL 461
+ FK M+ L
Sbjct: 126 VLFKRMRKL 134
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--P 65
S N + +L + ++ +A +F MP NAVS+ MI G+ + G EA LY M
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441
Query: 66 ARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCKKGRVIE 120
+ + A++S G+ +E F M +E + + M+D + G++ E
Sbjct: 442 GIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501
Query: 121 AREIFDKMPEK-NVVAWTAMVDGYMK 145
A D MP K VAW A++ K
Sbjct: 502 AERFIDAMPYKPGSVAWAALLGACRK 527
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 339 bits (869), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 208/636 (32%), Positives = 331/636 (52%), Gaps = 58/636 (9%)
Query: 6 SASYNAMITALINNNCSIYEAFEIFATMP---MRNAVSYAAMITGFVRRGMFYEAEELYV 62
S YN++I+ L + + +A ++F TM R+ VS++AM+ + G +A +++V
Sbjct: 97 SVLYNSLIS-LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 63 NMP--ARWRDSVCSNALI-----SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKK 115
+ C A+I S ++ VGR + E DV S++D + K
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 116 GRVIE-AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
E A ++FDKM E NVV WT M+ M++ + FL M G + TL+ +
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL---GFMDEANKVFSMMSK 231
F AC G Q+H R G D+ S++ MY + G +D+ KVF M
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 232 RDAVSWNSLISGYVHNGEI-EEAYRLFERMPGKDFV--SWTTMITGFSSKGNL------- 281
+SW +LI+GY+ N + EA LF M + V + T + F + GNL
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 282 -------------------------------EKSIELFNMMPEKDDVTWTAIISGFVNNE 310
E + F + EK+ V++ + G N
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
+E+AF+ E+ +++ + T +S+LS A ++ +G QIH+ VVK+ + + + N
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+S+YSKCG++ A R+F ++ RN++S+ SMI+GFA++G L F +M +EG+ P
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 431 NQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDL 490
N++T++++LSAC+HVGLV EG+ +F SM + I+P EHYACMVD+L RAG L +A +
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 491 INSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKK 550
IN+M F+ VW LGA R H N +L KLAA+ ++EL+P+ Y+ LS++Y+ GK
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKW 693
Query: 551 RDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAG 586
+ +R K K + + K GCSWI + DK+H F G
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVG 729
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 187/409 (45%), Gaps = 49/409 (11%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP---EKNVVAWTAMVDGYMKVD 147
AR+ E +E D V + S++ Y K G +A ++F+ M +++VV+W+AM+ Y
Sbjct: 86 ARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNG 145
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDIILG 206
D +F+ G+ N T + AC G G + + G F+ D+ +G
Sbjct: 146 RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205
Query: 207 NSIITMY--GRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--- 261
S+I M+ G F + A KVF MS+ + V+W +I+ + G EA R F M
Sbjct: 206 CSLIDMFVKGENSF-ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG 264
Query: 262 -----------------------GKDFVSWTT--------------MITGFSSKGNLEKS 284
GK SW M S+ G+++
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDC 324
Query: 285 IELFNMMPEKDDVTWTAIISGFVNNEQY-EEAFRWFIEMLRK-DVRPNQLTLSSVLSASA 342
++F+ M + ++WTA+I+G++ N EA F EM+ + V PN T SS A
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ G Q+ K + S+ S+ NS++S++ K + DA R F ++ E+N+VSYN+
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ G +N E+A L ++ + L + TF S+LS +VG + +G
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 168/340 (49%), Gaps = 51/340 (15%)
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
L L R G +S+T + L ++C R +R G VH + F + D +L NS+I++Y
Sbjct: 49 LDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYS 108
Query: 215 RLGFMDEANKVFSMM---SKRDAVSWNSLISGYVHNGEIEEAYRLF-------------- 257
+ G +A VF M KRD VSW+++++ Y +NG +A ++F
Sbjct: 109 KSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYC 168
Query: 258 -----ERMPGKDFVSWTTMITGFSSK----------------------GNLEKSIELFNM 290
DFV + GF K + E + ++F+
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
M E + VTWT +I+ + EA R+F++M+ ++ TLSSV SA A L+ G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKC---GNVVDAYRIFTNIDERNIVSYNSMISGF 407
Q+H+ ++ + DV + SLV +Y+KC G+V D ++F +++ +++S+ ++I+G+
Sbjct: 289 KQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 408 AQN-GLGEEALNLFRKMKDEGLV-PNQITFLSVLSACNHV 445
+N L EA+NLF +M +G V PN TF S AC ++
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 338 bits (866), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 192/629 (30%), Positives = 339/629 (53%), Gaps = 59/629 (9%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
N I ++ S+ +A E+F MP RN VSY ++ITG+ + G EA LY+ M
Sbjct: 105 NNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL 164
Query: 65 -PARWR-DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
P ++ S+ S + +G+ + A++ + ++A +++ Y + ++ +A
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGK-QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDAS 223
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDL-FLSMRRGGMAF-----NSITLTILFE 176
+F +P K++++W++++ G+ ++ GF+ LS + ++F N +
Sbjct: 224 RVFYGIPMKDLISWSSIIAGFSQL-----GFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 177 ACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS 236
AC R G Q+HGL + + I G S+ MY R GF++ A +VF + + D S
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 237 WNSLISGYVHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGNLEKSIEL----- 287
WN +I+G +NG +EA +F +M F+ S +++ + L + +++
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 288 ---------------------------FNMMPE----KDDVTWTAIISGFVNNEQYEEAF 316
FN+ + D V+W I++ + +EQ E
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 317 RWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLY 376
R F ML + P+ +T+ ++L ++L GSQ+H + +K + + I+N L+ +Y
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 377 SKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+KCG++ A RIF ++D R++VS++++I G+AQ+G GEEAL LF++MK G+ PN +TF+
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578
Query: 437 SVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTF 496
VL+AC+HVGLVEEG + +M+T + I P EH +C+VD+L RAG L EA I+ M
Sbjct: 579 GVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638
Query: 497 EPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRV 556
EP VW LL A +T N+ LA+ AA+++++++P ++T +V+L +++ G + +
Sbjct: 639 EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALL 698
Query: 557 RMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
R K ++K PG SWI ++DK+H+F A
Sbjct: 699 RSSMKKHDVKKIPGQSWIEIEDKIHIFFA 727
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 209/448 (46%), Gaps = 50/448 (11%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
I + + D + ++ Y K G + +ARE+FD MPE+N+V++T+++ GY + +
Sbjct: 92 HILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAE 151
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
L+L M + + + + +AC G Q+H V + +I N++I
Sbjct: 152 AIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIA 211
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG-EIEEAYRLFERMPGKDF----- 265
MY R M +A++VF + +D +SW+S+I+G+ G E E L E + F
Sbjct: 212 MYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 271
Query: 266 ----------------------------------VSWTTMITGFSSKGNLEKSIELFNMM 291
++ ++ ++ G L + +F+ +
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
D +W II+G NN +EA F +M P+ ++L S+L A L+QG
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQN 410
QIH++++K +D+++ NSL+++Y+ C ++ + +F + + + VS+N++++ Q+
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPG--P 468
E L LF+ M P+ IT ++L C VE + S Y+++ G P
Sbjct: 452 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGC-----VEISSLKLGSQVHCYSLKTGLAP 506
Query: 469 EHYA--CMVDILGRAGSLAEAIDLINSM 494
E + ++D+ + GSL +A + +SM
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 153/312 (49%), Gaps = 40/312 (12%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T L AC +G ++H + YD IL N I++MYG+ G + +A +VF M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFV----SWTTMITGFSSKGN----- 280
+R+ VS+ S+I+GY NG+ EA RL+ +M +D V ++ ++I +S +
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 281 --------LEKSIEL------------FNMM----------PEKDDVTWTAIISGFVNNE 310
LE S L FN M P KD ++W++II+GF
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 311 QYEEAFRWFIEMLRKDV-RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQ 369
EA EML V PN+ S L A ++ + GSQIH +K + +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 370 NSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
SL +Y++CG + A R+F I+ + S+N +I+G A NG +EA+++F +M+ G +
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 430 PNQITFLSVLSA 441
P+ I+ S+L A
Sbjct: 369 PDAISLRSLLCA 380
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 75/110 (68%)
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S++ A +++ +L QG +IH H++ N + D + N ++S+Y KCG++ DA +F +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
ERN+VSY S+I+G++QNG G EA+ L+ KM E LVP+Q F S++ AC
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 336 bits (861), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 328/646 (50%), Gaps = 49/646 (7%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS-- 79
++ A IF+ M R+AV+Y +I G + G +A EL+ M + SN L S
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD-SNTLASLV 396
Query: 80 ------GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
G L G+ A + + G++++ Y K + A + F + +NV
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIE-GALLNLYAKCADIETALDYFLETEVENV 455
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V W M+ Y +D + F +F M+ + N T + + C R G Q+H
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ + F + + + +I MY +LG +D A + + +D VSW ++I+GY ++A
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 254 YRLFERMPGK----DFVSWT---------------------TMITGFSSK---------- 278
F +M + D V T ++GFSS
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 279 ----GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
G +E+S F D++ W A++SGF + EEA R F+ M R+ + N T
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S + A++ TA + QG Q+HA + K +S+ + N+L+S+Y+KCG++ DA + F +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIY 454
+N VS+N++I+ ++++G G EAL+ F +M + PN +T + VLSAC+H+GLV++G Y
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 455 FKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHL 514
F+SM + Y + P PEHY C+VD+L RAG L+ A + I M +P VW LL A H
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 515 NLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
N+++ + AA HL+ELEP+ + YV+LS+LY+V K + R K K K ++K PG SWI
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 575 ILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLL 620
+K+ +H F G ++ EI Q ++K E + + +SLL
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLL 981
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 226/479 (47%), Gaps = 54/479 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN-ALISGY 81
+Y AF++F MP R ++ MI R + E L+V M + ++V N SG
Sbjct: 136 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS---ENVTPNEGTFSGV 192
Query: 82 LKVGRC---------EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
L+ R + ARI + V ++D Y + G V AR +FD + K+
Sbjct: 193 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+W AM+ G K +C + LF M G+ + + AC + G Q+HG
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
LV + GF D + N+++++Y LG + A +FS MS+RDAV++N+LI+G G E+
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372
Query: 253 AYRLFERMP--------------------------GKDFVSWTTMITGFSSK-------- 278
A LF+RM G+ ++TT + GF+S
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALL 431
Query: 279 ------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++E +++ F ++ V W ++ + + +FR F +M +++ PNQ
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
T S+L L G QIH+ ++K N + + + + L+ +Y+K G + A+ I
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+++VS+ +MI+G+ Q ++AL FR+M D G+ +++ + +SAC + ++EG
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 235/512 (45%), Gaps = 56/512 (10%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSVCSNALI 78
A +F + +++ S+ AMI+G + EA L+ +M P + SV S
Sbjct: 241 ARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK 300
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
L++G + + + D ++V Y G +I A IF M +++ V +
Sbjct: 301 IESLEIGE-QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNT 359
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC---GRFFRYREGVQVHGLVS 195
+++G + E +LF M G+ +S TL L AC G FR G Q+H +
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR---GQQLHAYTT 416
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
+ GF + + +++ +Y + ++ A F + V WN ++ Y ++ ++R
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 256 LFERMPGKDFVS---------------------------------------WTTMITGFS 276
+F +M ++ V + +I ++
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 277 SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
G L+ + ++ KD V+WT +I+G+ ++A F +ML + +R +++ L++
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+SA A L +G QIHA SD+ QN+LV+LYS+CG + ++Y F + +
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG-FIYF 455
+++N+++SGF Q+G EEAL +F +M EG+ N TF S + A + +++G ++
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 716
Query: 456 KSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
KT Y+ E E ++ + + GS+++A
Sbjct: 717 VITKTGYDSE--TEVCNALISMYAKCGSISDA 746
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 225/489 (46%), Gaps = 54/489 (11%)
Query: 77 LISGYLKV-GRCEEAARIFEAMVEKDVVAWG----SMVDGYCKKGRVIEAREIFDKMPEK 131
L+ G LK G +E ++ +++ + + G + D Y KG + A ++FD+MPE+
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC-GRFFRYREGVQV 190
+ W M+ + + F LF+ M + N T + + EAC G + Q+
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 191 HGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI 250
H + G ++ N +I +Y R GF+D A +VF + +D SW ++ISG N
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 251 EEAYRLF-------------------------ERMPGKDFVSWTTMITGFSSK------- 278
EA RLF E + + + + GFSS
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 279 -------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
GNL + +F+ M ++D VT+ +I+G E+A F M + P+
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
TL+S++ A +A TL +G Q+HA+ K+ S+ I+ +L++LY+KC ++ A F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ N+V +N M+ + + +FR+M+ E +VPNQ T+ S+L C +G +E G
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 452 -FIYFKSMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
I+ + +KT + + Y C ++D+ + G L A D++ + F V +
Sbjct: 510 EQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMI 563
Query: 509 AGRTHLNLD 517
AG T N D
Sbjct: 564 AGYTQYNFD 572
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 155/335 (46%), Gaps = 41/335 (12%)
Query: 158 SMRRGGMAFNSITLTILFEACGRFF-RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRL 216
S+ G+ N TL L E C + EG ++H + + G D + L + Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 217 GFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----------- 265
G + A KVF M +R +WN +I I E + LF RM ++
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 266 -----------------------------VSWTTMITGFSSKGNLEKSIELFNMMPEKDD 296
V +I +S G ++ + +F+ + KD
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+W A+ISG NE EA R F +M + P SSVLSA +L G Q+H
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 357 VVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEA 416
V+K+ SD + N+LVSLY GN++ A IF+N+ +R+ V+YN++I+G +Q G GE+A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 417 LNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+ LF++M +GL P+ T S++ AC+ G + G
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 17/267 (6%)
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
KG+L + ++F+ MPE+ TW +I + E F F+ M+ ++V PN+ T S V
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 338 LSAS-AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
L A + + QIHA ++ + + N L+ LYS+ G V A R+F + ++
Sbjct: 193 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
S+ +MISG ++N EA+ LF M G++P F SVLSAC + +E G +
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG---EQ 309
Query: 457 SMKTLYNIEPGPEHYAC--MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL------G 508
+ + + Y C +V + G+L A + ++M+ + + L+ G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCG 368
Query: 509 AGRTHLNLDLAKLAAQHLMELEPDSAT 535
G + L HL LEPDS T
Sbjct: 369 YGEKAMEL----FKRMHLDGLEPDSNT 391
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 335 bits (858), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 199/627 (31%), Positives = 342/627 (54%), Gaps = 51/627 (8%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD-------SVCSNALI 78
A ++F + +N V + AMI G+ G ++ EL+++M + + S+ S
Sbjct: 381 AAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA 440
Query: 79 SGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
S L++G + + I + + K++ ++VD Y K G + +AR+IF++M +++ V W
Sbjct: 441 SHDLEMGS-QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNT 499
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
++ Y++ + + FDLF M G+ + L +AC +G QVH L + G
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
D D+ G+S+I MY + G + +A KVFS + + VS N+LI+GY N +EEA LF+
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQ 618
Query: 259 RMPGKDF----VSWTTMIT---------------------GFSSKG-------------- 279
M + +++ T++ GFSS+G
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS 678
Query: 280 -NLEKSIELFNMMPE-KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
+ ++ LF+ + K V WT ++SG N YEEA +++ EM V P+Q T +V
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTV 738
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER-N 396
L + ++L +G IH+ + + + D N+L+ +Y+KCG++ + ++F + R N
Sbjct: 739 LRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSN 798
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFK 456
+VS+NS+I+G+A+NG E+AL +F M+ ++P++ITFL VL+AC+H G V +G F+
Sbjct: 799 VVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFE 858
Query: 457 SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL 516
M Y IE +H ACMVD+LGR G L EA D I + +P +W +LLGA R H +
Sbjct: 859 MMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDD 918
Query: 517 DLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIIL 576
+++A+ L+ELEP +++ YV+LS++Y+ G N +R + + ++K PG SWI +
Sbjct: 919 IRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDV 978
Query: 577 KDKVHLFLAGRKSCLDLKEIEVTLQTI 603
+ + H+F AG KS ++ +IE+ L+ +
Sbjct: 979 EQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 221/462 (47%), Gaps = 73/462 (15%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISG 80
I +A +F + N V + + +G+V+ G+ EA ++ M D + +I+
Sbjct: 211 ISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT 270
Query: 81 YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
Y+++G+ ++A +F M DVVAW M+ G+ K+G
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG------------------------ 306
Query: 141 DGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
C + F +MR+ + TL + A G G+ VH + G
Sbjct: 307 -------CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA 359
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+I +G+S+++MY + M+ A KVF + +++ V WN++I GY HNGE + LF M
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 261 PGK----DFVSWTTMITG-----------------------------------FSSKGNL 281
D ++T++++ ++ G L
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
E + ++F M ++D+VTW II +V +E EAF F M + + L+S L A
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
L QG Q+H VK ++ D+ +SL+ +YSKCG + DA ++F+++ E ++VS N
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN 443
++I+G++QN L EEA+ LF++M G+ P++ITF +++ AC+
Sbjct: 600 ALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 230/497 (46%), Gaps = 55/497 (11%)
Query: 20 NCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALIS 79
C ++++ ++F MP R A++ +R G ++ L + + + R NA++
Sbjct: 55 QCKLFKSRKVFDEMPQRLALA--------LRIGKAVHSKSLILGIDSEGR---LGNAIVD 103
Query: 80 GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAM 139
Y K + A + F+ +EKDV AW SM+ Y G+ P K + +
Sbjct: 104 LYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGK-----------PGKVLRS---- 147
Query: 140 VDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGF 199
F+S+ + N T +I+ C R G Q+H + + G
Sbjct: 148 ----------------FVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 200 DYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFER 259
+ + G +++ MY + + +A +VF + + V W L SGYV G EEA +FER
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 260 MPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEA 315
M + D +++ T+I + G L+ + LF M D V W +ISG A
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 316 FRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSL 375
+F M + V+ + TL SVLSA A L+ G +HA +K+ + S++ + +SLVS+
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 376 YSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITF 435
YSKC + A ++F ++E+N V +N+MI G+A NG + + LF MK G + TF
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 436 LSVLSACNHVGLVEEGFIYFKSM---KTLYNIEPGPEHYACMVDILGRAGSLAEAIDLIN 492
S+LS C +E G + + K N+ G +VD+ + G+L +A +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN----ALVDMYAKCGALEDARQIFE 487
Query: 493 SMTFEPPPGVWGALLGA 509
M + W ++G+
Sbjct: 488 RMC-DRDNVTWNTIIGS 503
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 220/440 (50%), Gaps = 19/440 (4%)
Query: 98 VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFL 157
+E++ G++VD Y K R+ +AR +F+ + + N V WT + GY+K E+ +F
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 158 SMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLG 217
MR G + + + R + ++ + G +S D++ N +I+ +G+ G
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWNVMISGHGKRG 306
Query: 218 FMDEANKVFSMMSKRDAVSWNSLIS------GYVHN---GEIEEAYRLFERMPGKDFVSW 268
A + F M K S S + G V N G + A + + +V
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVG- 365
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
+++++ +S +E + ++F + EK+DV W A+I G+ +N + + F++M
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ T +S+LS AA+ L GSQ H+ ++K + ++ + N+LV +Y+KCG + DA +I
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV-GL 447
F + +R+ V++N++I + Q+ EA +LF++M G+V + S L AC HV GL
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+ ++ S+K ++ + ++D+ + G + +A + +S+ E AL+
Sbjct: 546 YQGKQVHCLSVKC--GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSMNALI 602
Query: 508 GAGRTHLNLDLAKLAAQHLM 527
AG + NL+ A + Q ++
Sbjct: 603 -AGYSQNNLEEAVVLFQEML 621
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
L G +H+ + + ++S+ + N++V LY+KC V A + F + E+++ ++NSM+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
++ G + L F + + + PN+ TF VLS C VE G SM + +E
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM-GLE 192
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
+VD+ + +++A + + +P W L ++ L + A
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIV-DPNTVCWTCLFSG---YVKAGLPEEAVLV 248
Query: 526 LMELEPDSATP----YVVLSDLYSVIGKKRDG 553
+ + P +V + + Y +GK +D
Sbjct: 249 FERMRDEGHRPDHLAFVTVINTYIRLGKLKDA 280
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/633 (29%), Positives = 332/633 (52%), Gaps = 57/633 (9%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVG 85
A ++F MP RN +S+ ++I+G+ + G + +A EL+ + AR + +G L
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELF--LEAREANLKLDKFTYAGALGFC 158
Query: 86 --RCE-EAARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
RC+ + + +V + V ++D Y K G++ +A +FD+ E++ V+W
Sbjct: 159 GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWN 218
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR---YREGVQVHGLV 194
+++ GY++V E+ +L M R G+ + L + +AC +G+ +H
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYT 278
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEI---- 250
++ G ++DI++ +++ MY + G + EA K+FS+M ++ V++N++ISG++ EI
Sbjct: 279 AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEA 338
Query: 251 -EEAYRLFERMPGK---------------------------------------DFVSWTT 270
EA++LF M + D +
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 398
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPN 330
+I ++ G+ E ++ F ++D +WT++I V NEQ E AF F ++ +RP
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPE 458
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ T+S ++SA A A L+ G QI + +K +++ S++ S +S+Y+K GN+ A ++F
Sbjct: 459 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ ++ +Y++MIS AQ+G EALN+F MK G+ PNQ FL VL AC H GLV +
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQ 578
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G YF+ MK Y I P +H+ C+VD+LGR G L++A +LI S F+ P W ALL +
Sbjct: 579 GLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSC 638
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
R + + + K A+ LMELEP+++ YV+L ++Y+ G VR + + ++K P
Sbjct: 639 RVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPA 698
Query: 571 CSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
SWI++ ++ H F S + I L+T+
Sbjct: 699 LSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/474 (30%), Positives = 222/474 (46%), Gaps = 77/474 (16%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
YCK + AR++FD+MPE+N++++ +++ GY ++ +E +LFL R + + T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
CG G +HGLV G + L N +I MY + G +D+A +F +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERMPGK---------------------------- 263
RD VSWNSLISGYV G EE L +M
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 264 --------------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF--- 306
D V T ++ ++ G+L+++I+LF++MP K+ VT+ A+ISGF
Sbjct: 272 MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQM 331
Query: 307 --VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMES 364
+ +E EAF+ F++M R+ + P+ T S VL A +A TL G QIHA + K N +S
Sbjct: 332 DEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS 391
Query: 365 DVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
D I ++L+ LY+ G+ D + F + +++I S+ SMI QN E A +LFR++
Sbjct: 392 DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 425 DEGLVPNQITFLSVLSACNHVG-----------LVEEGFIYFKSMKT------------- 460
+ P + T ++SAC ++ G F S+KT
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMP 511
Query: 461 LYN---IE---PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLG 508
L N IE P Y+ M+ L + GS EA+++ SM A LG
Sbjct: 512 LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLG 565
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 47/334 (14%)
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
A +S ILF+ + G HG + + + + L N+++ MY + + A +
Sbjct: 44 ALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQ 103
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF--------------------------- 257
+F M +R+ +S+NSLISGY G E+A LF
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCD 163
Query: 258 ----ERMPGKDFVSWTT--------MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISG 305
E + G V+ + +I +S G L++++ LF+ E+D V+W ++ISG
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT---LNQGSQIHAHVVKMNM 362
+V EE +M R + L SVL A + +G IH + K+ M
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 363 ESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ-----NGLGEEAL 417
E D+ ++ +L+ +Y+K G++ +A ++F+ + +N+V+YN+MISGF Q + EA
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 418 NLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
LF M+ GL P+ TF VL AC+ +E G
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 128/261 (49%), Gaps = 14/261 (5%)
Query: 14 TALIN---NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFY-----EAEELYVNMP 65
TAL++ N S+ EA ++F+ MP +N V+Y AMI+GF++ EA +L+++M
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 66 AR-WRDSVCSNALISGYLKVGRCEEAARIFEAMV-----EKDVVAWGSMVDGYCKKGRVI 119
R S + +++ + E R A++ + D ++++ Y G
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTE 410
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+ + F ++++ +WT+M+D +++ + E FDLF + + T++++ AC
Sbjct: 411 DGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA 470
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F G Q+ G + G D + S I+MY + G M AN+VF + D ++++
Sbjct: 471 DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSA 530
Query: 240 LISGYVHNGEIEEAYRLFERM 260
+IS +G EA +FE M
Sbjct: 531 MISSLAQHGSANEALNIFESM 551
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 25/199 (12%)
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERN 396
+ +A + ++ G H H++K ++ + + N+L+++Y KC + A ++F + ERN
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 397 IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNH-----VGLVEEG 451
I+S+NS+ISG+ Q G E+A+ LF + ++ L ++ T+ L C +G + G
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 452 FIYFKSMKT---LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL- 507
+ + L N+ ++D+ + G L +A+ L + E W +L+
Sbjct: 173 LVVVNGLSQQVFLINV---------LIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLIS 222
Query: 508 -----GAGRTHLNLDLAKL 521
GA LNL LAK+
Sbjct: 223 GYVRVGAAEEPLNL-LAKM 240
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 334 bits (856), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 273/470 (58%), Gaps = 2/470 (0%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACG 179
AR + PE + + +V GY + D + +F+ M R G F +S + + +A
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F R G Q+H + G + + +G ++I MYG G ++ A KVF M + + V+WN+
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTW 299
+I+ ++ A +F++M ++ SW M+ G+ G LE + +F+ MP +DDV+W
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 237
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
+ +I G +N + E+F +F E+ R + PN+++L+ VLSA + + + G +H V K
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 297
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE-RNIVSYNSMISGFAQNGLGEEALN 418
VS+ N+L+ +YS+CGNV A +F + E R IVS+ SMI+G A +G GEEA+
Sbjct: 298 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDIL 478
LF +M G+ P+ I+F+S+L AC+H GL+EEG YF MK +Y+IEP EHY CMVD+
Sbjct: 358 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 417
Query: 479 GRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYV 538
GR+G L +A D I M P VW LLGA +H N++LA+ Q L EL+P+++ V
Sbjct: 418 GRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 477
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
+LS+ Y+ GK +D +R ++RI+K+ S + + ++ F AG K
Sbjct: 478 LLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEK 527
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 13/289 (4%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
NA+I+ + A IF+ M+ ++ +W M+ GY K G + A+ IF +MP ++ V
Sbjct: 176 NAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDV 235
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W+ M+ G F + F F ++R GM+ N ++LT + AC + + G +HG V
Sbjct: 236 SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV 295
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVF-SMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ G+ + + + N++I MY R G + A VF M KR VSW S+I+G +G+ EEA
Sbjct: 296 EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
Query: 254 YRLFERMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMMP-----EKDDVTWTAIIS 304
RLF M D +S+ +++ S G +E+ + F+ M E + + ++
Sbjct: 356 VRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 305 GFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+ + + ++A+ + +M + P + ++L A ++ + Q+
Sbjct: 416 LYGRSGKLQKAYDFICQM---PIPPTAIVWRTLLGACSSHGNIELAEQV 461
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 332 bits (850), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 315/584 (53%), Gaps = 45/584 (7%)
Query: 86 RCEEAARIF--EAMVE---KDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMV 140
R + A R+ +A+V+ +++ ++V Y K RV +AR++FD+MPEK+ + W M+
Sbjct: 133 RDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMI 192
Query: 141 DGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG- 198
GY K + + + +F + ++ TL + A R G+Q+H L ++ G
Sbjct: 193 SGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ +D +L I++Y + G + + +F K D V++N++I GY NGE E + LF+
Sbjct: 253 YSHDYVL-TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 259 -------RMPGKDFVSW-----------------------------TTMITGFSSKGNLE 282
R+ VS T + T +S +E
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIE 371
Query: 283 KSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASA 342
+ +LF+ PEK +W A+ISG+ N E+A F EM + + PN +T++ +LSA A
Sbjct: 372 SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA 431
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
L+ G +H V + ES + + +L+ +Y+KCG++ +A R+F + ++N V++N+
Sbjct: 432 QLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNT 491
Query: 403 MISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLY 462
MISG+ +G G+EALN+F +M + G+ P +TFL VL AC+H GLV+EG F SM Y
Sbjct: 492 MISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLA 522
EP +HYACMVDILGRAG L A+ I +M+ EP VW LLGA R H + +LA+
Sbjct: 552 GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTV 611
Query: 523 AQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHL 582
++ L EL+PD+ +V+LS+++S VR K +++ K+PG + I + + H+
Sbjct: 612 SEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHV 671
Query: 583 FLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
F +G +S +KEI L+ + +E + P+ + +L +E +
Sbjct: 672 FTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEE 715
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 202/448 (45%), Gaps = 52/448 (11%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRG-GMAFNSITLTIL 174
G + AR+IF + +V + ++ G+ + +F +R+ + NS T
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 175 FEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDA 234
A F R G +HG G D +++LG++I+ MY + +++A KVF M ++D
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 235 VSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTT------------------------ 270
+ WN++ISGY N E+ ++F + + T
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 271 ------------MITGF----SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
++TGF S G ++ LF + D V + A+I G+ +N + E
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
+ F E++ R TL S++ S + IH + +K N S S+ +L +
Sbjct: 306 SLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTT 362
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+YSK + A ++F E+++ S+N+MISG+ QNGL E+A++LFR+M+ PN +T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+LSAC +G + G + + + E ++ + + GS+AEA L + M
Sbjct: 423 ITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 495 TFEPPPGVWGALL------GAGRTHLNL 516
T + W ++ G G+ LN+
Sbjct: 482 T-KKNEVTWNTMISGYGLHGQGQEALNI 508
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 40/265 (15%)
Query: 67 RWRDSVCSNALISGYLKVGRCE-----------EAARIFEAMVEKDVVAWGSM-----VD 110
R D V NA+I GY G E AR+ + + V G + +
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIH 342
Query: 111 GYCKKGRVI--------------------EAREIFDKMPEKNVVAWTAMVDGYMKVDCFE 150
GYC K + AR++FD+ PEK++ +W AM+ GY + E
Sbjct: 343 GYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTE 402
Query: 151 DGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSII 210
D LF M++ + N +T+T + AC + G VH LV F+ I + ++I
Sbjct: 403 DAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALI 462
Query: 211 TMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----V 266
MY + G + EA ++F +M+K++ V+WN++ISGY +G+ +EA +F M V
Sbjct: 463 GMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPV 522
Query: 267 SWTTMITGFSSKGNLEKSIELFNMM 291
++ ++ S G +++ E+FN M
Sbjct: 523 TFLCVLYACSHAGLVKEGDEIFNSM 547
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 104/276 (37%), Gaps = 70/276 (25%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+ AS + +T + + I A ++F P ++ S+ AMI+G+ + G+ +A L+ M
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 65 P--------------------------ARWRDSVC-----------SNALISGYLKVGRC 87
+W + S ALI Y K G
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
EA R+F+ M +K+ V W +M+ GY G+ EA
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEA-------------------------- 505
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQV-HGLVSRFGFDYDIILG 206
++F M G+ +T + AC +EG ++ + ++ R+GF+ +
Sbjct: 506 -----LNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLI 241
++ + GR G + A + MS S W +L+
Sbjct: 561 ACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+ +++ +Q HA ++ +D+S+ L S G + A IF ++ ++ +N +
Sbjct: 30 STSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 404 ISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSACN 443
+ GF+ N +L++F + K L PN T+ +SA +
Sbjct: 90 MRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/617 (31%), Positives = 320/617 (51%), Gaps = 56/617 (9%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMF---YEAEELYVNMPARWRDSVCSNALIS 79
+ +A IF + ++ VS+ ++ITG+ + G Y +L+ M R +D + + ++
Sbjct: 65 LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREM--RAQDILPNAYTLA 122
Query: 80 GYLKVGRCEEAA---RIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEK 131
G K +++ R A+V K D+ S+V YCK G V + ++F MPE+
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 132 NVVAWTAMVDGYMKVDCFEDG---FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
N W+ MV GY E+ F+LFL + G + + +L + G
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIY-VGLGR 241
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + + G + L N+++TMY + ++EA K+F R++++W+++++GY NG
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 249 EIEEAYRLFERM--------------------------PGKDFVSW-------------T 269
E EA +LF RM GK S+ T
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATT 361
Query: 270 TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
++ ++ G L + + F+ + E+D WT++ISG+V N EEA + M + P
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIP 421
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N T++SVL A ++ ATL G Q+H H +K +V I ++L ++YSKCG++ D +F
Sbjct: 422 NDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF 481
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
+++VS+N+MISG + NG G+EAL LF +M EG+ P+ +TF++++SAC+H G VE
Sbjct: 482 RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVE 541
Query: 450 EGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGA 509
G+ YF M ++P +HYACMVD+L RAG L EA + I S + +W LL A
Sbjct: 542 RGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSA 601
Query: 510 GRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSP 569
+ H +L A + LM L ++ YV LS +Y+ +G+ RD RV + + K
Sbjct: 602 CKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEV 661
Query: 570 GCSWIILKDKVHLFLAG 586
GCSWI LK++ H+F+ G
Sbjct: 662 GCSWIELKNQYHVFVVG 678
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 246/482 (51%), Gaps = 52/482 (10%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGF---DLFLSMRRGGM 164
+V+ Y K G++ +A IF+ + K+VV+W +++ GY + + LF MR +
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 165 AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANK 224
N+ TL +F+A G Q H LV + DI + S++ MY + G +++ K
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 225 VFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF-----ERMPGKD--------------- 264
VF+ M +R+ +W++++SGY G +EEA ++F E+ G D
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAAT 234
Query: 265 --------------------FVSWT-TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAII 303
FV+ + ++T +S +L ++ ++F+ +++ +TW+A++
Sbjct: 235 IYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 304 SGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNME 363
+G+ N + EA + F M ++P++ T+ VL+A + L +G Q+H+ ++K+ E
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 364 SDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM 423
+ +LV +Y+K G + DA + F + ER++ + S+ISG+ QN EEAL L+R+M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 424 KDEGLVPNQITFLSVLSACNHVGLVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAG 482
K G++PN T SVL AC+ + +E G ++ ++K + +E P A + + + G
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV-PIGSA-LSTMYSKCG 472
Query: 483 SLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNL--DLAKLAAQHLME-LEPDSATPYVV 539
SL + +L+ T W A++ +G +H + +L + L E +EPD T +
Sbjct: 473 SLEDG-NLVFRRTPNKDVVSWNAMI-SGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNI 530
Query: 540 LS 541
+S
Sbjct: 531 IS 532
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 190/371 (51%), Gaps = 58/371 (15%)
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
G VHG + R G I N ++ Y + G + +A+ +F+ + +D VSWNSLI+GY
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 247 NGEIEEAY---RLFERMPGKDFVSW----------------------------------- 268
NG I +Y +LF M +D +
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 269 ----TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
T+++ + G +E +++F MPE++ TW+ ++SG+ + EEA + F LR
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 325 --KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
++ + ++VLS+ AAT + G QIH +K + V++ N+LV++YSKC ++
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+A ++F + +RN +++++M++G++QNG EA+ LF +M G+ P++ T + VL+AC
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 443 NHVGLVEEGFIYFKSMKTLYN--IEPGPEHY----ACMVDILGRAGSLAEAIDLINSMTF 496
+ + +EEG K L++ ++ G E + +VD+ +AG LA+A + +
Sbjct: 333 SDICYLEEG-------KQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ- 384
Query: 497 EPPPGVWGALL 507
E +W +L+
Sbjct: 385 ERDVALWTSLI 395
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 168/300 (56%), Gaps = 21/300 (7%)
Query: 10 NAMITALINNNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM---- 64
NA++T + + C S+ EA ++F + RN+++++AM+TG+ + G EA +L+ M
Sbjct: 260 NALVT--MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 65 --PARWRD----SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
P+ + + CS+ YL+ G+ + + + + E+ + A ++VD Y K G +
Sbjct: 318 IKPSEYTIVGVLNACSDIC---YLEEGK-QLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
+AR+ FD + E++V WT+++ GY++ E+ L+ M+ G+ N T+ + +AC
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 433
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G QVHG + GF ++ +G+++ TMY + G +++ N VF +D VSWN
Sbjct: 434 SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWN 493
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
++ISG HNG+ +EA LFE M + D V++ +I+ S KG +E+ FNMM ++
Sbjct: 494 AMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQ 553
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNV 382
+ ++ P+ TL L+ + L G +H +++ + + N LV+ Y+KCG +
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNG---LGEEALNLFRKMKDEGLVPNQITFLSVL 439
A+ IF I +++VS+NS+I+G++QNG + LFR+M+ + ++PN T +
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 440 SA 441
A
Sbjct: 126 KA 127
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 329 bits (844), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 337/661 (50%), Gaps = 73/661 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M RT+ S+N +++A + + E F +P R++VS+ MI G+ G +++A +
Sbjct: 75 MPLRTAFSWNTVLSAY-SKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRV 133
Query: 61 YVNM------PARW------------------------------RDSV-CSNALISGYLK 83
+M P ++ R +V SN+L++ Y K
Sbjct: 134 MGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 84 VGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGY 143
G A +F+ MV +D+ +W +M+ + + G++ A F++M E+++V W +M+ G+
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 144 MKVDCFEDGFDLFLSMRRGGM-AFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ D+F M R + + + TL + AC + G Q+H + GFD
Sbjct: 254 NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG 262
I+ N++I+MY R G +E A RL E+
Sbjct: 314 GIVLNALISMYSRC-------------------------------GGVETARRLIEQRGT 342
Query: 263 KDFV--SWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
KD +T ++ G+ G++ ++ +F + ++D V WTA+I G+ + Y EA F
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M+ RPN TL+++LS +++ A+L+ G QIH VK VS+ N+L+++Y+K G
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 381 NVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
N+ A R F I ER+ VS+ SMI AQ+G EEAL LF M EGL P+ IT++ V
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
SAC H GLV +G YF MK + I P HYACMVD+ GRAG L EA + I M EP
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
WG+LL A R H N+DL K+AA+ L+ LEP+++ Y L++LYS GK + ++R
Sbjct: 583 VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSL 619
K R++K G SWI +K KVH+F + + EI +T++ I K+ + S+
Sbjct: 643 MKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 702
Query: 620 L 620
L
Sbjct: 703 L 703
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 138/237 (58%), Gaps = 32/237 (13%)
Query: 238 NSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDV 297
N+L++ Y G A +LF+ MP + SW T+++ +S +G+++ + E F+ +P++D V
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 298 TWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV 357
+WT +I G+ N QY +A R +M+++ + P Q TL++VL++ AAT + G ++H+ +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 358 VKMNMESDVSIQNSLVSLYSKCGN------VVD-------------------------AY 386
VK+ + +VS+ NSL+++Y+KCG+ V D A
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAM 232
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM-KDEGLVPNQITFLSVLSAC 442
F + ER+IV++NSMISGF Q G AL++F KM +D L P++ T SVLSAC
Sbjct: 233 AQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 329 bits (843), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 338/616 (54%), Gaps = 23/616 (3%)
Query: 1 MADRTSASYNAMITALINNNCSIYE-AFEIFATMPMRNAVSYAAMITGFVR----RGMFY 55
M R ++N ++ ++N +E A E+F M A +Y + + ++ + F
Sbjct: 49 MPKRDDLAWNEIV--MVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFA 106
Query: 56 EAEELY---VNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGY 112
E +++ + + S+C N+LI Y + G+ E + ++F +M ++++ +W S++ Y
Sbjct: 107 EGRQIHGYVLRLGLESNVSMC-NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSY 165
Query: 113 CKKGRVIEAREIFDKMP----EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
K G V +A + D+M + ++V W +++ GY +D + M+ G+ ++
Sbjct: 166 TKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPST 225
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSM 228
+++ L +A + G +HG + R YD+ + ++I MY + G++ A VF M
Sbjct: 226 SSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDM 285
Query: 229 MSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKS 284
M ++ V+WNSL+SG + +++A L RM + D ++W ++ +G+++ G EK+
Sbjct: 286 MDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKA 345
Query: 285 IELFNMMPEK----DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSA 340
+++ M EK + V+WTAI SG N + A + FI+M + V PN T+S++L
Sbjct: 346 LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405
Query: 341 SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+ L+ G ++H ++ N+ D + +LV +Y K G++ A IF I +++ S+
Sbjct: 406 LGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASW 465
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
N M+ G+A G GEE + F M + G+ P+ ITF SVLS C + GLV+EG+ YF M++
Sbjct: 466 NCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
Y I P EH +CMVD+LGR+G L EA D I +M+ +P +WGA L + + H +L+LA+
Sbjct: 526 RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAE 585
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
+A + L LEP ++ Y+++ +LYS + + D R+R + R+R SWI + V
Sbjct: 586 IAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTV 645
Query: 581 HLFLAGRKSCLDLKEI 596
H+F A K+ D +I
Sbjct: 646 HIFYAEGKTHPDEGDI 661
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 180/351 (51%), Gaps = 38/351 (10%)
Query: 116 GRVIE---AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLT 172
GR + A ++FD+MP+++ +AW +V ++ +E +LF M+ G T+
Sbjct: 34 GRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMV 93
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
L + C + EG Q+HG V R G + ++ + NS+I MY R G ++ + KVF+ M R
Sbjct: 94 KLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR 153
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELF 288
+ SWNS++S Y G +++A L + M D V+W ++++G++SKG + +I +
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
M I+G ++P+ ++SS+L A A L
Sbjct: 214 KRMQ----------IAG---------------------LKPSTSSISSLLQAVAEPGHLK 242
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G IH ++++ + DV ++ +L+ +Y K G + A +F +D +NIV++NS++SG +
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
L ++A L +M+ EG+ P+ IT+ S+ S +G E+ MK
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK 353
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 112/199 (56%), Gaps = 1/199 (0%)
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+LF+ MP++DD+ W I+ + + +E+A F EM + T+ +L +
Sbjct: 44 KLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKE 103
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+G QIH +V+++ +ES+VS+ NSL+ +YS+ G + + ++F ++ +RN+ S+NS++S
Sbjct: 104 GFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
+ + G ++A+ L +M+ GL P+ +T+ S+LS GL ++ K M+ + ++
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ-IAGLK 222
Query: 466 PGPEHYACMVDILGRAGSL 484
P + ++ + G L
Sbjct: 223 PSTSSISSLLQAVAEPGHL 241
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 327 bits (837), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 202/629 (32%), Positives = 332/629 (52%), Gaps = 55/629 (8%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSV--------C 73
++ +A+ +F M RN S+ ++ G+ ++G F EA LY M W V C
Sbjct: 144 NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM--LWVGGVKPDVYTFPC 201
Query: 74 SNALISGYLKVGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
G + R +E + E D+ +++ Y K G V AR +FD+MP ++
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
+++W AM+ GY + +G +LF +MR + + +TLT + AC R G +H
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V GF DI + NS+ MY G EA K+FS M ++D VSW ++ISGY +N ++
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 253 A---YRLFERMPGK-DFVSWTTMITGFSSKGNLEKSIEL--------------------- 287
A YR+ ++ K D ++ +++ ++ G+L+ +EL
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 288 --------------FNMMPEKDDVTWTAIISGF-VNNEQYEEAFRWFIEMLRKDVRPNQL 332
F+ +P K+ ++WT+II+G +NN +E F+ ++ ++PN +
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI--FLRQMKMTLQPNAI 499
Query: 333 TLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
TL++ L+A A L G +IHAHV++ + D + N+L+ +Y +CG + A+ F N
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NS 558
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGF 452
++++ S+N +++G+++ G G + LF +M + P++ITF+S+L C+ +V +G
Sbjct: 559 QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Query: 453 IYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRT 512
+YF M+ Y + P +HYAC+VD+LGRAG L EA I M P P VWGALL A R
Sbjct: 619 MYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 513 HLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
H +DL +L+AQH+ EL+ S Y++L +LY+ GK R+ +VR K + GCS
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 573 WIILKDKVHLFLAGRKSCLDLKEIEVTLQ 601
W+ +K KVH FL+ K KEI L+
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 187/360 (51%), Gaps = 41/360 (11%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFNSIT 170
+ + G +++A +F KM E+N+ +W +V GY K F++ L+ M GG+ + T
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 171 LTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
+ CG G +VH V R+G++ DI + N++ITMY + G + A +F M
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 231 KRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMI-------------- 272
+RD +SWN++ISGY NG E LF M G D ++ T++I
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 273 -------TGFS--------------SKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQ 311
TGF+ + G+ ++ +LF+ M KD V+WT +ISG+ N
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378
Query: 312 YEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNS 371
++A + M + V+P+++T+++VLSA A L+ G ++H +K + S V + N+
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438
Query: 372 LVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN 431
L+++YSKC + A IF NI +N++S+ S+I+G N EAL R+MK L PN
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQPN 497
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 162/343 (47%), Gaps = 40/343 (11%)
Query: 149 FEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNS 208
E+ L SM+ +A + L C EG +V+ + + LGN+
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 209 IITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM-------- 260
+ M+ R G + +A VF MS+R+ SWN L+ GY G +EA L+ RM
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 261 -------------------PGK-------------DFVSWTTMITGFSSKGNLEKSIELF 288
GK D +IT + G+++ + LF
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 289 NMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLN 348
+ MP +D ++W A+ISG+ N E F M V P+ +TL+SV+SA
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
G IHA+V+ D+S+ NSL +Y G+ +A ++F+ ++ ++IVS+ +MISG+
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
N L ++A++ +R M + + P++IT +VLSAC +G ++ G
Sbjct: 375 YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 196/606 (32%), Positives = 305/606 (50%), Gaps = 51/606 (8%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN------A 76
I A ++F MP + +SY +I +VR G++++A +++ M + V A
Sbjct: 65 ITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVA 124
Query: 77 LISGYLKVGRCEEA--ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
+G LK + RI + +D +++ Y G+V AR++FD M ++V+
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+W M+ GY + D +F M + + T+ + CG G VH LV
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
I + N+++ MY + G MDEA VF M +RD ++W +I+GY +G++E A
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 255 RLFERMP--------------------------GKDFVSW-------------TTMITGF 275
L M GK W T++I+ +
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 276 SSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLS 335
+ ++ +F+ + W+AII+G V NE +A F M R+DV PN TL+
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L A AA A L Q IH ++ K S + LV +YSKCG + A++IF I E+
Sbjct: 425 SLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 396 ----NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
++V + ++ISG+ +G G AL +F +M G+ PN+ITF S L+AC+H GLVEEG
Sbjct: 485 HKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544
Query: 452 FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGR 511
F+ M Y HY C+VD+LGRAG L EA +LI ++ FEP VWGALL A
Sbjct: 545 LTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACV 604
Query: 512 THLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGC 571
TH N+ L ++AA L ELEP++ YV+L+++Y+ +G+ +D +VR + +RK PG
Sbjct: 605 THENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGH 664
Query: 572 SWIILK 577
S I ++
Sbjct: 665 STIEIR 670
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 198/468 (42%), Gaps = 121/468 (25%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELY---VN--- 63
NA++ A+ N + A ++F M R+ +S+ MI+G+ R G +A ++ VN
Sbjct: 156 NALL-AMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV 214
Query: 64 ----------MPA--------------------RWRDSV-CSNALISGYLKVGRCEEAAR 92
+P R D + NAL++ YLK GR +EA
Sbjct: 215 DLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARF 274
Query: 93 IFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDG 152
+F+ M +DV+ W M++GY + G V E+
Sbjct: 275 VFDRMERRDVITWTCMINGYTEDGDV-------------------------------ENA 303
Query: 153 FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITM 212
+L M+ G+ N++T+ L CG + +G +HG R DII+ S+I+M
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISM 363
Query: 213 YGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD-------- 264
Y + +D +VFS SK W+++I+G V N + +A LF+RM +D
Sbjct: 364 YAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 265 ---------------------------FVSWTTMITG----FSSKGNLEKSIELFNMMPE 293
F+S TG +S G LE + ++FN + E
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQE 483
Query: 294 ----KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
KD V W A+ISG+ + A + F+EM+R V PN++T +S L+A + + + +
Sbjct: 484 KHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEE 543
Query: 350 GSQIHAHVVKMNMESDVSIQNS-----LVSLYSKCGNVVDAYRIFTNI 392
G + + +E ++ S +V L + G + +AY + T I
Sbjct: 544 GLTL----FRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTI 587
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------ 260
+++ Y G + A K+F M + +S+N +I YV G +A +F RM
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 261 ---------------------------PGKDFVSW--------TTMITGFSSKGNLEKSI 285
G+ SW ++ + + G +E +
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
++F++M +D ++W +ISG+ N +A F M+ + V + T+ S+L
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK 232
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
L G +H V + + + ++N+LV++Y KCG + +A +F ++ R+++++ MI+
Sbjct: 233 DLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
G+ ++G E AL L R M+ EG+ PN +T S++S C V +G
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDER 395
S+L+ AAT ++++ +H HV+ S I ++L Y+ CG++ A ++F + +
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHITYARKLFEEMPQS 78
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL--VPNQITFLSVLSACNH-----VGLV 448
+++SYN +I + + GL +A+++F +M EG+ VP+ T+ V A +GLV
Sbjct: 79 SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLV 138
Query: 449 EEGFI 453
G I
Sbjct: 139 VHGRI 143
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 325 bits (833), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 332/641 (51%), Gaps = 58/641 (9%)
Query: 4 RTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFV------RRGM 53
R + YNAMIT +NN Y A +F M + ++A+++ G ++ +
Sbjct: 111 RDTVMYNAMITGFSHNN-DGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCV 169
Query: 54 FYEAEELYVNMPARWRDSVCSNALISGYLKVGRC----EEAARIFEAMVEKDVVAWGSMV 109
+ A L A + SV SNAL+S Y K A ++F+ ++EKD +W +M+
Sbjct: 170 QFHAAAL--KSGAGYITSV-SNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMM 226
Query: 110 DGYCKKGRVIEAREIFDKMPEK-NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNS 168
GY K G E+ + M + +VA+ AM+ GY+ +++ ++ M G+ +
Sbjct: 227 TGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDE 286
Query: 169 ITLTILFEACGRFFRYREGVQVHGLVSR---FGFDYDIILGNSIITMYGRLGFMDEANKV 225
T + AC + G QVH V R F F +D
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----------------------- 323
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSI 285
NSL+S Y G+ +EA +FE+MP KD VSW +++G+ S G++ ++
Sbjct: 324 ------------NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
+F M EK+ ++W +ISG N EE + F M R+ P S + + A
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
G Q HA ++K+ +S +S N+L+++Y+KCG V +A ++F + + VS+N++I+
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
Q+G G EA++++ +M +G+ P++IT L+VL+AC+H GLV++G YF SM+T+Y I
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
PG +HYA ++D+L R+G ++A +I S+ F+P +W ALL R H N++L +AA
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 526 LMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLA 585
L L P+ Y++LS++++ G+ + RVR + + ++K CSWI ++ +VH FL
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLV 671
Query: 586 GRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
S + + + + LQ + K + + P + L +E D
Sbjct: 672 DDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESD 712
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 206/494 (41%), Gaps = 111/494 (22%)
Query: 75 NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKN 132
N LI Y K A ++F+ + E D +A +MV GYC G + AR +F+K P ++
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF-RYREGVQVH 191
V + AM+ G+ + +LF M+ G ++ T + ++ VQ H
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFH 172
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLG----FMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
+ G Y + N+++++Y + + A KVF + ++D SW ++++GYV N
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 248 GEIEEAYRLFERMPGK-DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
G + L E M V++ MI+G+ ++G
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF-------------------------- 266
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
Y+EA M+ + ++ T SV+ A A L G Q+HA+V++ +
Sbjct: 267 -----YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSF 320
Query: 367 SIQNSLVSLYSKC-------------------------------GNVVDAYRIFTNIDER 395
NSLVSLY KC G++ +A IF + E+
Sbjct: 321 HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 396 NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPN------------------------ 431
NI+S+ MISG A+NG GEE L LF MK EG P
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYH 440
Query: 432 ----QITFLSVLSACNHV-------GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGR 480
+I F S LSA N + G+VEE F++M L ++ + ++ LG+
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-----WNALIAALGQ 495
Query: 481 AGSLAEAIDLINSM 494
G AEA+D+ M
Sbjct: 496 HGHGAEAVDVYEEM 509
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 70/301 (23%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG + FGF + N +I +Y + ++ A ++F +S+ D ++ +++SGY +G+
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 250 IEEAYRLFERMP--GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
I A +FE+ P +D V + MITGFS
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSH------------------------------ 125
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA-TLNQGSQIHAHVVKMNMESDV 366
NN+ Y A F +M + +P+ T +SVL+ A A Q Q HA +K
Sbjct: 126 NNDGY-SAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYIT 184
Query: 367 SIQNSLVSLYSKCGN----VVDAYRIFTNI---DERN----------------------- 396
S+ N+LVS+YSKC + + A ++F I DER+
Sbjct: 185 SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 397 ------IVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+V+YN+MISG+ G +EAL + R+M G+ ++ T+ SV+ AC GL++
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 451 G 451
G
Sbjct: 305 G 305
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 33/145 (22%)
Query: 346 TLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMIS 405
+L +H +++ + I N L+ +Y K + A ++F I E + ++ +M+S
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 406 G---------------------------------FAQNGLGEEALNLFRKMKDEGLVPNQ 432
G F+ N G A+NLF KMK EG P+
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 433 ITFLSVLSACNHVGLVEEGFIYFKS 457
TF SVL+ V E+ + F +
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHA 173
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 206/666 (30%), Positives = 342/666 (51%), Gaps = 60/666 (9%)
Query: 14 TALINNNC---SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRD 70
T L++ C S+ EA +F + + V Y M+ GF + +A + +V M R+ D
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM--RYDD 130
Query: 71 ------------SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRV 118
VC + L+VG+ E + ++ D+ A + + Y K +V
Sbjct: 131 VEPVVYNFTYLLKVCGD---EAELRVGK-EIHGLLVKSGFSLDLFAMTGLENMYAKCRQV 186
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EAR++FD+MPE+++V+W +V GY + ++ SM + + IT+ + A
Sbjct: 187 NEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAV 246
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G ++HG R GFD + + +++ MY + G ++ A ++F M +R+ VSWN
Sbjct: 247 SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWN 306
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK-------SIEL 287
S+I YV N +EA +F++M + VS + + G+LE+ S+EL
Sbjct: 307 SMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366
Query: 288 ----------------------------FNMMPEKDDVTWTAIISGFVNNEQYEEAFRWF 319
F + + V+W A+I GF N + +A +F
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF 426
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+M + V+P+ T SV++A A + + IH V++ ++ +V + +LV +Y+KC
Sbjct: 427 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G ++ A IF + ER++ ++N+MI G+ +G G+ AL LF +M+ + PN +TFLSV+
Sbjct: 487 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVI 546
Query: 440 SACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPP 499
SAC+H GLVE G F MK Y+IE +HY MVD+LGRAG L EA D I M +P
Sbjct: 547 SACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA 606
Query: 500 PGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMK 559
V+GA+LGA + H N++ A+ AA+ L EL PD +V+L+++Y +VR+
Sbjct: 607 VNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVS 666
Query: 560 KKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSL 619
+ +RK+PGCS + +K++VH F +G + D K+I L+ + KE + +
Sbjct: 667 MLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV 726
Query: 620 LGLERD 625
LG+E D
Sbjct: 727 LGVEND 732
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 163/322 (50%), Gaps = 43/322 (13%)
Query: 173 ILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKR 232
+L E C R Q+ LV + G + +++++ R G +DEA +VF + +
Sbjct: 42 LLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 98
Query: 233 DAVSWNSLISGYVHNGEIEEAYRLFERMP--------------------------GK--- 263
V +++++ G+ ++++A + F RM GK
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 264 ----------DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYE 313
D + T + ++ + ++ ++F+ MPE+D V+W I++G+ N
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 314 EAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLV 373
A M ++++P+ +T+ SVL A +A ++ G +IH + ++ +S V+I +LV
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 374 SLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQI 433
+Y+KCG++ A ++F + ERN+VS+NSMI + QN +EA+ +F+KM DEG+ P +
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 434 TFLSVLSACNHVGLVEEG-FIY 454
+ + L AC +G +E G FI+
Sbjct: 339 SVMGALHACADLGDLERGRFIH 360
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 196/646 (30%), Positives = 339/646 (52%), Gaps = 51/646 (7%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYL 82
+A ++F M +A + MI GF G++ EA + Y M D+ +I
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 83 KVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ EE +I AMV K DV S++ Y K G +A ++F++MPE+++V+W
Sbjct: 142 GISSLEEGKKI-HAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200
Query: 138 AMVDGYMKVDCFEDGFD---LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
+M+ GY+ + DGF LF M + G + + AC + + G ++H
Sbjct: 201 SMISGYLALG---DGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257
Query: 195 SRFGFDY-DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
R + D+++ SI+ MY + G + A ++F+ M +R+ V+WN +I Y NG + +A
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 254 YRLFERMPGKD------------------------------------FVSWTTMITGFSS 277
+ F++M ++ V T +I +
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGE 377
Query: 278 KGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSV 337
G L+ + +F+ M EK+ ++W +II+ +V N + A F E+ + P+ T++S+
Sbjct: 378 CGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASI 437
Query: 338 LSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI 397
L A A + +L++G +IHA++VK S+ I NSLV +Y+ CG++ DA + F +I +++
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDV 497
Query: 398 VSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKS 457
VS+NS+I +A +G G ++ LF +M + PN+ TF S+L+AC+ G+V+EG+ YF+S
Sbjct: 498 VSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFES 557
Query: 458 MKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLD 517
MK Y I+PG EHY CM+D++GR G+ + A + M F P +WG+LL A R H ++
Sbjct: 558 MKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDIT 617
Query: 518 LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILK 577
+A+ AA+ + ++E D+ YV+L ++Y+ G+ D NR+++ + K I ++ S + K
Sbjct: 618 IAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAK 677
Query: 578 DKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLE 623
K H+F G +S + +I L +S+ E D H S L E
Sbjct: 678 GKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPE 723
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 176/388 (45%), Gaps = 52/388 (13%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM----- 64
N++I+ + C+ ++A ++F MP R+ VS+ +MI+G++ G + + L+ M
Sbjct: 169 NSLISLYMKLGCA-WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGF 227
Query: 65 -PARWRDSVCSNALISGYL-KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
P R+ A Y K+G+ + + DV+ S++D Y K G V A
Sbjct: 228 KPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAE 287
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEACGRF 181
IF+ M ++N+VAW M+ Y + D F F M + G+ + IT L A
Sbjct: 288 RIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL 347
Query: 182 FRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLI 241
EG +HG R GF ++L ++I MYG G + A +F M++++ +SWNS+I
Sbjct: 348 ----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSII 403
Query: 242 SGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG--------------------------- 274
+ YV NG+ A LF+ + V +T I
Sbjct: 404 AAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW 463
Query: 275 ------------FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
++ G+LE + + FN + KD V+W +II + + + F EM
Sbjct: 464 SNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM 523
Query: 323 LRKDVRPNQLTLSSVLSASAATATLNQG 350
+ V PN+ T +S+L+A + + +++G
Sbjct: 524 IASRVNPNKSTFASLLAACSISGMVDEG 551
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 154/294 (52%), Gaps = 8/294 (2%)
Query: 269 TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
T + GF+ +E +++LF+ M + D W +I GF + Y EA +++ M+ V+
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+ T V+ + A ++L +G +IHA V+K+ SDV + NSL+SLY K G DA ++
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F + ER+IVS+NSMISG+ G G +L LF++M G P++ + +S L AC+HV
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 449 EEGF-IYFKSMKTLYNIEPGPEHY-ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
+ G I+ ++++ IE G ++D+ + G ++ A + N M + W +
Sbjct: 248 KMGKEIHCHAVRS--RIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVM 304
Query: 507 LGAGRTHLNLDLAKLAAQHLME---LEPDSATPYVVLSDLYSVIGKKRDGNRVR 557
+G + + A L Q + E L+PD T +L + G+ G +R
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMR 358
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/610 (30%), Positives = 319/610 (52%), Gaps = 51/610 (8%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRG-------MFYEAEELYVNMPARWRDSVCSNALISGY 81
+F +P ++ V++ MI+G V+ G +FY+ E V +V S I +
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPF 264
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L+ G+ + A I +E D ++D Y K GRVI A ++F+ MP KN+++WT ++
Sbjct: 265 LEGGK-QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY + ++ +LF SM + G+ + + + +C G QVH +
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG---EIEEAYRLFE 258
D + NS+I MY + + +A KVF + + D V +N++I GY G E+ EA +F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 259 RMPGK---------------------------------------DFVSWTTMITGFSSKG 279
M + D + + +I +S+
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 280 NLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
L+ S +F+ M KD V W ++ +G+V + EEA F+E+ RP++ T +++++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A+ A++ G + H ++K +E + I N+L+ +Y+KCG+ DA++ F + R++V
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+NS+IS +A +G G++AL + KM EG+ PN ITF+ VLSAC+H GLVE+G F+ M
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
+ IEP EHY CMV +LGRAG L +A +LI M +P VW +LL N++LA
Sbjct: 684 R-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDK 579
+ AA+ + +P + + +LS++Y+ G + +VR + K++ + K PG SWI + +
Sbjct: 743 EHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKE 802
Query: 580 VHLFLAGRKS 589
VH+FL+ KS
Sbjct: 803 VHIFLSKDKS 812
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 133/514 (25%), Positives = 247/514 (48%), Gaps = 54/514 (10%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKV- 84
A ++F MP RN VS++ M++ G++ E+ +++ +DS + ++S +++
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP-NEYILSSFIQAC 156
Query: 85 ------GR---CEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
GR + + + ++ ++DV ++D Y K G + AR +FD +PEK+ V
Sbjct: 157 SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVT 216
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVS 195
WT M+ G +K+ LF + + + L+ + AC G Q+H +
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 196 RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYR 255
R+G + D L N +I Y + G + A+K+F+ M ++ +SW +L+SGY N +EA
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 256 LFERMP----GKDFVSWTTMIT--------GFSSK----------GN------------- 280
LF M D + ++++T GF ++ GN
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 281 ----LEKSIELFNMMPEKDDVTWTAIISGFVN-NEQYE--EAFRWFIEMLRKDVRPNQLT 333
L + ++F++ D V + A+I G+ Q+E EA F +M + +RP+ LT
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
S+L ASA+ +L QIH + K + D+ ++L+ +YS C + D+ +F +
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+++V +NSM +G+ Q EEALNLF +++ P++ TF ++++A ++ V+ G
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG-Q 575
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
F +E P ++D+ + GS +A
Sbjct: 576 EFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 200/406 (49%), Gaps = 62/406 (15%)
Query: 94 FEAMVEKDVVAWGSMVDGY---------CKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
++ +V ++ WG +D Y + G ++ AR++F+KMPE+N+V+W+ MV
Sbjct: 62 YQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACN 121
Query: 145 KVDCFEDGFDLFLSM-RRGGMAFNSITLTILFEAC------GRFFRYREGVQVHGLVSRF 197
+E+ +FL R + N L+ +AC GR+ + Q+ + +
Sbjct: 122 HHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF----QLQSFLVKS 177
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
GFD D+ +G +I Y + G +D A VF + ++ V+W ++ISG V G + +LF
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 258 ERMPGKDFVS---------------------------------------WTTMITGFSSK 278
++ + V +I +
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 279 GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVL 338
G + + +LFN MP K+ ++WT ++SG+ N ++EA F M + ++P+ SS+L
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357
Query: 339 SASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIV 398
++ A+ L G+Q+HA+ +K N+ +D + NSL+ +Y+KC + DA ++F ++V
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417
Query: 399 SYNSMISGFAQNGLG---EEALNLFRKMKDEGLVPNQITFLSVLSA 441
+N+MI G+++ G EALN+FR M+ + P+ +TF+S+L A
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 153/295 (51%), Gaps = 42/295 (14%)
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
VHG + +G + D L N +I +Y R G M A KVF M +R+ VSW++++S H+G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 250 IEEAYRLF-------ERMPGKDFVS--------------W-------------------- 268
EE+ +F + P + +S W
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 269 -TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
T +I + GN++ + +F+ +PEK VTWT +ISG V + + + F +++ +V
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
P+ LS+VLSA + L G QIHAH+++ +E D S+ N L+ Y KCG V+ A++
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+F + +NI+S+ +++SG+ QN L +EA+ LF M GL P+ S+L++C
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 271 MITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM--LRKDVR 328
+I +S G + + ++F MPE++ V+W+ ++S ++ YEE+ F+E RKD
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD-S 143
Query: 329 PNQLTLSSVLSASAATATLNQGS--QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
PN+ LSS + A + + Q+ + +VK + DV + L+ Y K GN+ A
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
+F + E++ V++ +MISG + G +L LF ++ ++ +VP+ +VLSAC+ +
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 447 LVEEG-FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
+E G I+ ++ Y +E ++D + G + A L N M
Sbjct: 264 FLEGGKQIHAHILR--YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGM 310
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ +L A+ L+ + +H ++ +E D + N L++LYS+ G +V A ++F +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLF----RKMKDEGLVPNQITFLSVLSACN 443
ERN+VS+++M+S +G+ EE+L +F R KD PN+ S + AC+
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS---PNEYILSSFIQACS 157
>sp|Q9FHR3|PP403_ARATH Putative pentatricopeptide repeat-containing protein At5g37570
OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1
Length = 550
Score = 322 bits (826), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 269/484 (55%), Gaps = 33/484 (6%)
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF-NSITLTILFEACGRFF 182
+F+++P W ++ GY F + + + M R G+A + T ++ + C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLIS 242
+ R G VHGLV R GFD D+++G S + YG+ + A KVF M +R+AVSW +L+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 243 GYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT---- 298
YV +GE+EEA +F+ MP ++ SW ++ G G+L + +LF+ MP++D ++
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 299 ---------------------------WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
W+A+I G+ N Q EAF+ F EM K+V+P++
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 332 LTLSSVLSASAATATLNQGSQIHAHV-VKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFT 390
+ ++SA + ++ +++ +MN S + +L+ + +KCG++ A ++F
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 391 NIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE 450
+ +R++VSY SM+ G A +G G EA+ LF KM DEG+VP+++ F +L C LVEE
Sbjct: 365 EMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEE 424
Query: 451 GFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAG 510
G YF+ M+ Y+I P+HY+C+V++L R G L EA +LI SM FE WG+LLG
Sbjct: 425 GLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGC 484
Query: 511 RTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPG 570
H N ++A++ A+HL ELEP SA YV+LS++Y+ + + D +R K I K G
Sbjct: 485 SLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICG 544
Query: 571 CSWI 574
SWI
Sbjct: 545 RSWI 548
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 164/313 (52%), Gaps = 18/313 (5%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
++ A ++F MP RNAVS+ A++ +V+ G EA+ ++ MP R S NAL+ G +
Sbjct: 161 LFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSW--NALVDGLV 218
Query: 83 KVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
K G A ++F+ M ++D++++ SM+DGY K G ++ AR++F++ +V AW+A++ G
Sbjct: 219 KSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILG 278
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRF--FRYREGVQ--VHGLVSRFG 198
Y + + F +F M + + + L AC + F E V +H +++F
Sbjct: 279 YAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS 338
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
Y + ++I M + G MD A K+F M +RD VS+ S++ G +G EA RLFE
Sbjct: 339 SHYVV---PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFE 395
Query: 259 RMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----WTAIISGFVNN 309
+M + D V++T ++ +E+ + F +M +K + ++ I++
Sbjct: 396 KMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRT 455
Query: 310 EQYEEAFRWFIEM 322
+ +EA+ M
Sbjct: 456 GKLKEAYELIKSM 468
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 171/393 (43%), Gaps = 87/393 (22%)
Query: 69 RDSVCSNALISGYLKVGRCEE---AARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIF 125
+D V + + Y G+C++ A ++F M E++ V+W ++V Y K G + EA+ +F
Sbjct: 143 KDVVVGTSFVDFY---GKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF 199
Query: 126 DKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYR 185
D MPE+N+ +W A+VDG +K + LF M +
Sbjct: 200 DLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPK------------------------ 235
Query: 186 EGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
DII S+I Y + G M A +F D +W++LI GY
Sbjct: 236 ---------------RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYA 280
Query: 246 HNGEIEEAYRLFERMPGKDFVSWTTMITG---------------------------FSSK 278
NG+ EA+++F M K+ ++ G FSS
Sbjct: 281 QNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH 340
Query: 279 -------------GNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
G+++++ +LF MP++D V++ +++ G + EA R F +M+ +
Sbjct: 341 YVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE 400
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHV-VKMNMESDVSIQNSLVSLYSKCGNVVD 384
+ P+++ + +L + + +G + + K ++ + + +V+L S+ G + +
Sbjct: 401 GIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKE 460
Query: 385 AYRIFTNID-ERNIVSYNSMISGFAQNGLGEEA 416
AY + ++ E + ++ S++ G + +G E A
Sbjct: 461 AYELIKSMPFEAHASAWGSLLGGCSLHGNTEIA 493
Score = 40.8 bits (94), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSI-QNSLVSLYSKCG 380
M+++ P+ L+L ++ + LNQ IHA +++ +E D ++ + S S
Sbjct: 1 MIQRLSHPSLLSLETLFKLCKSEIHLNQ---IHARIIRKGLEQDQNLISIFISSSSSSSS 57
Query: 381 NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV-PNQITFLSVL 439
++ + +F + +N +I G++ L E +++ +M GL P++ TF V+
Sbjct: 58 SLSYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVM 117
Query: 440 SACNHVGLVEEG 451
C++ G V G
Sbjct: 118 KVCSNNGQVRVG 129
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 322 bits (826), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 175/525 (33%), Positives = 290/525 (55%), Gaps = 7/525 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++ Y V AR++FD++PE+NV+ M+ Y+ + +G +F +M + +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
T + +AC G ++HG ++ G + +GN +++MYG+ GF+ EA V
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFS--SKGNL 281
MS+RD VSWNSL+ GY N ++A + M D + +++ S + N+
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
++F M +K V+W +I ++ N EA + M P+ ++++SVL A
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 342 AATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYN 401
T+ L+ G +IH ++ + + ++ ++N+L+ +Y+KCG + A +F N+ R++VS+
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 402 SMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTL 461
+MIS + +G G +A+ LF K++D GLVP+ I F++ L+AC+H GL+EEG FK M
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 462 YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKL 521
Y I P EH ACMVD+LGRAG + EA I M+ EP VWGALLGA R H + D+ L
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 522 AAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVH 581
AA L +L P+ + YV+LS++Y+ G+ + +R K K ++K+PG S + + +H
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 582 LFLAGRKSCLDLKEIEVTLQTISKGTKEFDW-PKHDWSLLGLERD 625
FL G +S EI L + K KE + P + +L +E +
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEE 604
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/514 (22%), Positives = 207/514 (40%), Gaps = 105/514 (20%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------------PARWRD 70
+ A ++F +P RN + MI +V G + E +++ M P +
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 71 SVCS-------------------------NALISGYLKVGRCEEAARIFEAMVEKDVVAW 105
CS N L+S Y K G EA + + M +DVV+W
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 209
Query: 106 GSMVDGYCKKGR-------------------------------------VIEAREIFDKM 128
S+V GY + R V+ +++F KM
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKM 269
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
+K++V+W M+ YMK + +L+ M G +++++T + ACG G
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
++HG + R +++L N++I MY + G +++A VF M RD VSW ++IS Y +G
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Query: 249 EIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVT-----W 299
+A LF ++ D +++ T + S G LE+ F +M + +T
Sbjct: 390 RGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL 449
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
++ + +EA+R+ +M + PN+ ++L A + + G + +
Sbjct: 450 ACMVDLLGRAGKVKEAYRFIQDM---SMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
Query: 360 MNMESDVSIQNSLVSLYSKCG---------NVVDAYRIFTNIDERNIVSYNSMISGF--- 407
+ E L ++Y+K G N++ + + N N V N +I F
Sbjct: 507 LAPEQS-GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASN-VEVNRIIHTFLVG 564
Query: 408 -----AQNGLGEEALNLFRKMKDEGLVPNQITFL 436
+ + E L +KMK+ G VP+ + L
Sbjct: 565 DRSHPQSDEIYRELDVLVKKMKELGYVPDSESAL 598
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 320 IEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC 379
+E+ +K + L VL TL +H+ ++ ++ + S+ L+ Y+
Sbjct: 31 LELDQKSPQETVFLLGQVLDTYPDIRTLRT---VHSRIILEDLRCNSSLGVKLMRAYASL 87
Query: 380 GNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
+V A ++F I ERN++ N MI + NG E + +F M + P+ TF VL
Sbjct: 88 KDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 440 SACNHVGLVEEGF-IYFKSMK-----TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINS 493
AC+ G + G I+ + K TL+ + G +V + G+ G L+EA +++
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLF-VGNG------LVSMYGKCGFLSEARLVLDE 200
Query: 494 MT 495
M+
Sbjct: 201 MS 202
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 166/431 (38%), Gaps = 67/431 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMR----NAVSYAAMITGFVRRGMFYE 56
M ++ S+N MI + N + EA E+++ M +AVS +++
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPV-EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 57 AEEL--YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCK 114
+++ Y+ + + NALI Y K G E+A +FE M +DVV+W +M+ Y
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387
Query: 115 KGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTIL 174
GR +A +F K+ + G+ +SI
Sbjct: 388 SGRGCDAVALFSKLQD-------------------------------SGLVPDSIAFVTT 416
Query: 175 FEACGRFFRYREGVQVHGLVS-RFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS-KR 232
AC EG L++ + + ++ + GR G + EA + MS +
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476
Query: 233 DAVSWNSLISG-YVHNGE---IEEAYRLFERMPGKDFVSWTTMITGFSSK-GNLEKSIEL 287
+ W +L+ VH+ + A +LF+ P + + +++ +K G E+ +
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS--GYYVLLSNIYAKAGRWEEVTNI 534
Query: 288 FNMM--------PEKDDVTWTAIISGFV----NNEQYEEAFRWFIEMLRKD-----VRPN 330
N+M P +V II F+ ++ Q +E +R +++K V +
Sbjct: 535 RNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDS 594
Query: 331 QLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK---CGNVVDAYR 387
+ L V T ++ MN + + N+ + + CG+ A +
Sbjct: 595 ESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAK 654
Query: 388 IFTNIDERNIV 398
+ + I R I+
Sbjct: 655 LISQITSREII 665
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 315/587 (53%), Gaps = 38/587 (6%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM--PARWRDSVCSNALISGYLK 83
A+++F +P + V + MI G+ + E LY+NM DS L++G +
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 84 VGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTA 138
G + V K ++ ++V Y G + AR +FD+ +++V +W
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 139 MVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
M+ GY ++ +E+ +L + M R ++ S+TL ++ AC + +VH VS
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ + L N+ L++ Y GE++ A R+F
Sbjct: 267 TEPSLRLENA-------------------------------LVNAYAACGEMDIAVRIFR 295
Query: 259 RMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
M +D +SWT+++ G+ +GNL+ + F+ MP +D ++WT +I G++ + E+
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F EM + P++ T+ SVL+A A +L G I ++ K +++DV + N+L+ +Y K
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFK 415
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG A ++F ++D+R+ ++ +M+ G A NG G+EA+ +F +M+D + P+ IT+L V
Sbjct: 416 CGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGV 475
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
LSACNH G+V++ +F M++ + IEP HY CMVD+LGRAG + EA +++ M P
Sbjct: 476 LSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNP 535
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
VWGALLGA R H + +A+LAA+ ++ELEPD+ Y +L ++Y+ + +D VR
Sbjct: 536 NSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRR 595
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISK 605
K I+K+PG S I + H F+AG KS L +EI + L+ +++
Sbjct: 596 KIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQ 642
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 13/236 (5%)
Query: 263 KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM 322
K FV W + + G ++ + +LF +PE D V W +I G+ + E R ++ M
Sbjct: 71 KLFVFWCSRLGG-----HVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM 125
Query: 323 LRKDVRPNQLTLSSVLSA-SAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGN 381
L++ V P+ T +L+ L G ++H HVVK + S++ +QN+LV +YS CG
Sbjct: 126 LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGL 185
Query: 382 VVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+ A +F + ++ S+N MISG+ + EE++ L +M+ + P +T L VLSA
Sbjct: 186 MDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSA 245
Query: 442 CNHV---GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
C+ V L + Y KT EP +V+ G + A+ + SM
Sbjct: 246 CSKVKDKDLCKRVHEYVSECKT----EPSLRLENALVNAYAACGEMDIAVRIFRSM 297
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK--CGNVVDAYRIFTNI 392
S +S T +Q Q+H+ + + + + Q L + G+V AY++F I
Sbjct: 35 SRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKI 94
Query: 393 DERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
E ++V +N+MI G+++ E + L+ M EG+ P+ TF +L+ G
Sbjct: 95 PEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDG 148
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/493 (33%), Positives = 280/493 (56%), Gaps = 32/493 (6%)
Query: 95 EAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFD 154
++ V DV S++ Y G + A ++F + EK+VV+W +M++G+++ + +
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
LF M + + +T+ + AC + G QV + + ++ L N+++ MY
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
+ G IE+A RLF+ M KD V+WTTM+ G
Sbjct: 279 KCG-------------------------------SIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEM-LRKDVRPNQLT 333
++ + E + E+ N MP+KD V W A+IS + N + EA F E+ L+K+++ NQ+T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
L S LSA A L G IH+++ K + + + ++L+ +YSKCG++ + +F +++
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFI 453
+R++ +++MI G A +G G EA+++F KM++ + PN +TF +V AC+H GLV+E
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 454 YFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
F M++ Y I P +HYAC+VD+LGR+G L +A+ I +M P VWGALLGA + H
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547
Query: 514 LNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSW 573
NL+LA++A L+ELEP + +V+LS++Y+ +GK + + +R ++ ++K PGCS
Sbjct: 548 ANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSS 607
Query: 574 IILKDKVHLFLAG 586
I + +H FL+G
Sbjct: 608 IEIDGMIHEFLSG 620
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 186/404 (46%), Gaps = 55/404 (13%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP------------------AR 67
A ++F T+ ++ VS+ +MI GFV++G +A EL+ M A+
Sbjct: 185 ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAK 244
Query: 68 WRD-----SVCS--------------NALISGYLKVGRCEEAARIFEAMVEKDVVAWGSM 108
R+ VCS NA++ Y K G E+A R+F+AM EKD V W +M
Sbjct: 245 IRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM 304
Query: 109 VDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR-RGGMAFN 167
+DGY ARE+ + MP+K++VAW A++ Y + + +F ++ + M N
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLN 364
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
ITL AC + G +H + + G + + +++I MY + G ++++ +VF+
Sbjct: 365 QITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK 283
+ KRD W+++I G +G EA +F +M + V++T + S G +++
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 284 SIELFNMM-------PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSS 336
+ LF+ M PE+ A I + Y E FIE + + P+ +
Sbjct: 485 AESLFHQMESNYGIVPEEKHY---ACIVDVLGRSGYLEKAVKFIEAM--PIPPSTSVWGA 539
Query: 337 VLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
+L A A LN ++++ +D L ++Y+K G
Sbjct: 540 LLGACKIHANLNLAEMACTRLLELEPRND-GAHVLLSNIYAKLG 582
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 184/408 (45%), Gaps = 76/408 (18%)
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF--MDEANKVFSMMSKRDAVSW 237
R R+ Q HG + R G D + + M F ++ A KVF + K ++ +W
Sbjct: 39 RCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAW 98
Query: 238 NSLISGYVHNGE---------------------------IEEAYRL-------------F 257
N+LI Y + I+ A +
Sbjct: 99 NTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAV 158
Query: 258 ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFR 317
+ G D ++I + S G+L+ + ++F + EKD V+W ++I+GFV ++A
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 318 WFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYS 377
F +M +DV+ + +T+ VLSA A L G Q+ +++ + + ++++ N+++ +Y+
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 378 KCGNVVDAYRIFTNIDE-------------------------------RNIVSYNSMISG 406
KCG++ DA R+F ++E ++IV++N++IS
Sbjct: 279 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISA 338
Query: 407 FAQNGLGEEALNLFRKMK-DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIE 465
+ QNG EAL +F +++ + + NQIT +S LSAC VG +E G + S + I
Sbjct: 339 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIR 397
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTH 513
+ ++ + + G L ++ ++ NS+ + VW A++G H
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 319 bits (818), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 295/537 (54%), Gaps = 40/537 (7%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
S+V Y K RV AR++FD+M E++V++W ++++GY+ E G +F+ M G+
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T+ +F C G VH + + F + N+++ MY + G +D A VF
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP------------------------- 261
MS R VS+ S+I+GY G EA +LFE M
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 262 -GKDFVSW-------------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
GK W ++ ++ G+++++ +F+ M KD ++W II G+
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 308 NNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N EA F +L K P++ T++ VL A A+ + ++G +IH ++++ SD
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
+ NSLV +Y+KCG ++ A+ +F +I +++VS+ MI+G+ +G G+EA+ LF +M+
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G+ ++I+F+S+L AC+H GLV+EG+ +F M+ IEP EHYAC+VD+L R G L +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A I +M P +WGALL R H ++ LA+ A+ + ELEP++ YV+++++Y+
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714
Query: 547 IGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
K R+R + + +RK+PGCSWI +K +V++F+AG S + + IE L+ +
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 771
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 206/415 (49%), Gaps = 45/415 (10%)
Query: 112 YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITL 171
Y G + EA +FD++ + + W +++ K F LF M G+ +S T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 172 TILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK 231
+ + ++ G Q+HG + + GF +GNS++ Y + +D A KVF M++
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 232 RDAVSWNSLISGYVHNGEIEEAYRLFERM--------------------------PGKDF 265
RD +SWNS+I+GYV NG E+ +F +M G+
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 266 VS-------------WTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQY 312
S T++ +S G+L+ + +F M ++ V++T++I+G+
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLA 378
Query: 313 EEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSL 372
EA + F EM + + P+ T+++VL+ A L++G ++H + + ++ D+ + N+L
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNAL 438
Query: 373 VSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG-LVPN 431
+ +Y+KCG++ +A +F+ + ++I+S+N++I G+++N EAL+LF + +E P+
Sbjct: 439 MDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPD 498
Query: 432 QITFLSVLSACNHVGLVEEGF-IYFKSMKTLYNIEPGPEHYA-CMVDILGRAGSL 484
+ T VL AC + ++G I+ M+ Y H A +VD+ + G+L
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGAL 550
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 162/321 (50%), Gaps = 39/321 (12%)
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
TL + + C ++G +V + GF D LG+ + MY G + EA++VF +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLFERM--PGKDFVSWT------------------ 269
A+ WN L++ +G+ + LF++M G + S+T
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 270 -----TMITGFSSKGNLEKSI--------------ELFNMMPEKDDVTWTAIISGFVNNE 310
+ +GF + ++ S+ ++F+ M E+D ++W +II+G+V+N
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 311 QYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQN 370
E+ F++ML + + T+ SV + A + ++ G +H+ VK + N
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 371 SLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVP 430
+L+ +YSKCG++ A +F + +R++VSY SMI+G+A+ GL EA+ LF +M++EG+ P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 431 NQITFLSVLSACNHVGLVEEG 451
+ T +VL+ C L++EG
Sbjct: 396 DVYTVTAVLNCCARYRLLDEG 416
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 142/277 (51%), Gaps = 17/277 (6%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARW--RDSVCSNALISGYLKVGR 86
+F M R+ VSY +MI G+ R G+ EA +L+ M D A+++ +
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 87 CEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
+E R+ E + E D+ +++D Y K G + EA +F +M K++++W ++ G
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 143 YMKVDCFEDG----FDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG 198
Y K +C+ + F+L L +R + + T+ + AC + +G ++HG + R G
Sbjct: 473 YSK-NCYANEALSLFNLLLEEKR--FSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 199 FDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFE 258
+ D + NS++ MY + G + A+ +F ++ +D VSW +I+GY +G +EA LF
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 259 RMPG----KDFVSWTTMITGFSSKGNLEKSIELFNMM 291
+M D +S+ +++ S G +++ FN+M
Sbjct: 590 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
F + E A + + D+ P TL SVL A + +L G ++ + D
Sbjct: 71 FCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVID 128
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
++ + L +Y+ CG++ +A R+F + + +N +++ A++G ++ LF+KM
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 426 EGLVPNQITFLSV 438
G+ + TF V
Sbjct: 189 SGVEMDSYTFSCV 201
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 101/271 (37%), Gaps = 59/271 (21%)
Query: 8 SYNAMITALINNNCSIYEAFEIFATMPMRNAVS-----YAAMITGFVRRGMFYEAEEL-- 60
S+N +I + NC EA +F + S A ++ F + E+
Sbjct: 465 SWNTIIGGY-SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIE 120
Y+ + D +N+L+ Y K G A +F+ + KD+V+W M+ GY G E
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG- 179
A +F++ MR+ G+ + I+ L AC
Sbjct: 584 AIALFNQ-------------------------------MRQAGIEADEISFVSLLYACSH 612
Query: 180 --------RFFR-YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS 230
RFF R ++ V + I+ M R G + +A + M
Sbjct: 613 SGLVDEGWRFFNIMRHECKIEPTVEHYA---------CIVDMLARTGDLIKAYRFIENMP 663
Query: 231 -KRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
DA W +L+ G + +++ A ++ E++
Sbjct: 664 IPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 281/504 (55%), Gaps = 35/504 (6%)
Query: 121 AREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGR 180
A +F+++ E NV +++ + + F +F M+R G+ ++ T L +AC
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 181 FFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD--EANKVFSMMSKRDAVSWN 238
+H + + G DI + N++I Y R G + +A K+F MS+RD VSWN
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 239 SLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPE----- 293
S++ G V GE+ +A RLF+ MP +D +SW TM+ G++ + K+ ELF MPE
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 249
Query: 294 ----------------------------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
K+ VTWT II+G+ +EA R +M+
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++ + + S+L+A + L+ G +IH+ + + N+ S+ + N+L+ +Y+KCGN+ A
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
+ +F +I ++++VS+N+M+ G +G G+EA+ LF +M+ EG+ P+++TF++VL +CNH
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGA 505
GL++EG YF SM+ +Y++ P EHY C+VD+LGR G L EAI ++ +M EP +WGA
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 506 LLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRI 565
LLGA R H +D+AK +L++L+P Y +LS++Y+ +R K K +
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 566 RKSPGCSWIILKDKVHLFLAGRKS 589
K G S + L+D +H F KS
Sbjct: 550 EKPSGASSVELEDGIHEFTVFDKS 573
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 178/372 (47%), Gaps = 17/372 (4%)
Query: 69 RDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
RD+V N+++ G +K G +A R+F+ M ++D+++W +M+DGY + + +A E+F+KM
Sbjct: 183 RDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM 242
Query: 129 PEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
PE+N V+W+ MV GY K E +F M A N +T TI+ +E
Sbjct: 243 PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEAD 300
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK----RDAVSWNSLISGY 244
++ + G +D SI+ G + ++ S++ + +A N+L+ Y
Sbjct: 301 RLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 245 VHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWT 300
G +++A+ +F +P KD VSW TM+ G G+ +++IELF+ M + D VT+
Sbjct: 361 AKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFI 420
Query: 301 AIISGFVNNEQYEEAFRWFIEMLR-KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
A++ + +E +F M + D+ P ++ L + ++ V
Sbjct: 421 AVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKV---VQT 477
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN---IDERNIVSYNSMISGFAQNGLGEEA 416
M ME +V I +L+ V A + N +D + +Y+ + + +A E
Sbjct: 478 MPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGV 537
Query: 417 LNLFRKMKDEGL 428
++ KMK G+
Sbjct: 538 ADIRSKMKSMGV 549
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 148/304 (48%), Gaps = 40/304 (13%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M++R + S+N+M+ L+ + +A +F MP R+ +S+ M+ G+ R +A EL
Sbjct: 180 MSERDTVSWNSMLGGLVKAG-ELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFEL 238
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM--VEKDVVAWGSMVDGYCKKGRV 118
+ MP R++V + ++ GY K G E A +F+ M K+VV W ++ GY +KG +
Sbjct: 239 FEKMPE--RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296
Query: 119 IEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEAC 178
EA + D+M VA G+ F++ + + AC
Sbjct: 297 KEADRLVDQM-----VA--------------------------SGLKFDAAAVISILAAC 325
Query: 179 GRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWN 238
G+++H ++ R + + N+++ MY + G + +A VF+ + K+D VSWN
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385
Query: 239 SLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMMPEK 294
+++ G +G +EA LF RM + D V++ ++ + G +++ I+ F M +
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
Query: 295 DDVT 298
D+
Sbjct: 446 YDLV 449
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 48/304 (15%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEEL 60
M R S+N M+ + +AFE+F MP RN VS++ M+ G+ + G A +
Sbjct: 211 MPQRDLISWNTMLDGYARCR-EMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVM 269
Query: 61 YVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMV-------------------EKD 101
+ MP ++ V +I+GY + G +EA R+ + MV E
Sbjct: 270 FDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESG 329
Query: 102 VVAWG--------------------SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
+++ G +++D Y K G + +A ++F+ +P+K++V+W M+
Sbjct: 330 LLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLH 389
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
G ++ +LF MRR G+ + +T + +C EG+ + + Y
Sbjct: 390 GLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV---Y 446
Query: 202 DIILG----NSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYRL 256
D++ ++ + GR+G + EA KV M + + V W +L+ + E++ A +
Sbjct: 447 DLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEV 506
Query: 257 FERM 260
+ +
Sbjct: 507 LDNL 510
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 255 RLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
++ R +D +I+ S ++ +FN + E + ++I N Q +
Sbjct: 41 QIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQ 100
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
AF F EM R + + T +L A + + L +H H+ K+ + SD+ + N+L+
Sbjct: 101 AFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALID 160
Query: 375 LYSKCG--NVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLV 429
YS+CG V DA ++F + ER+ VS+NSM+ G + G +A LF +M L+
Sbjct: 161 CYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLI 217
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
A LNQ Q+HA +++ N+ D+ I L+S S C A R+F + E N+ NS+I
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLI 89
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN- 463
AQN +A +F +M+ GL + T+ +L AC+ G + +K ++N
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------GQSWLPVVKMMHNH 142
Query: 464 IEP---GPEHYA--CMVDILGRAGSLA--EAIDLINSMTFEPPPGVWGALLGA 509
IE + Y ++D R G L +A+ L M+ E W ++LG
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGG 194
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 317 bits (811), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 288/517 (55%), Gaps = 44/517 (8%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
D+ ++VD Y K G + A ++FD+MP++++VAW AM+ G+ C D LFL MR
Sbjct: 137 DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMR 196
Query: 161 R-GGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM 219
R G++ N T+ +F A GR REG VHG +R GF D+++ I+ +Y + +
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCI 256
Query: 220 DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTT--------- 270
A +VF + K++ V+W+++I GYV N I+EA +F +M D V+ T
Sbjct: 257 IYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILM 316
Query: 271 --------------------------------MITGFSSKGNLEKSIELFNMMPEKDDVT 298
+I+ ++ G+L + F+ + KD ++
Sbjct: 317 GCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVIS 376
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
+ ++I+G V N + EE+FR F EM +RP+ TL VL+A + A L GS H + V
Sbjct: 377 YNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCV 436
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
+ SI N+L+ +Y+KCG + A R+F + +R+IVS+N+M+ GF +GLG+EAL+
Sbjct: 437 VHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALS 496
Query: 419 LFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSM-KTLYNIEPGPEHYACMVDI 477
LF M++ G+ P+++T L++LSAC+H GLV+EG F SM + +N+ P +HY CM D+
Sbjct: 497 LFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDL 556
Query: 478 LGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPY 537
L RAG L EA D +N M FEP V G LL A T+ N +L ++ + L ++
Sbjct: 557 LARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESL 615
Query: 538 VVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWI 574
V+LS+ YS + D R+RM +K + + K+PG SW+
Sbjct: 616 VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 186/386 (48%), Gaps = 48/386 (12%)
Query: 112 YCKKGRVIEAREIFDKMPEK--NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSI 169
Y V AR +FD++P N +AW M+ Y D E DL+ M G+
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 170 TLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMM 229
T + +AC +G +H V+ F D+ + +++ Y + G ++ A KVF M
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 230 SKRDAVSWNSLISGYVHNGEIEEAYRLF---ERMPG------------------------ 262
KRD V+WN++ISG+ + + + LF R+ G
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 263 -------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNN 309
D V T ++ ++ + + +F++ +K++VTW+A+I G+V N
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 310 EQYEEAFRWFIEMLRKD----VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
E +EA F +ML D V P + L +L A L+ G +H + VK D
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFILD 342
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKD 425
+++QN+++S Y+K G++ DA+R F+ I ++++SYNS+I+G N EE+ LF +M+
Sbjct: 343 LTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRT 402
Query: 426 EGLVPNQITFLSVLSACNHVGLVEEG 451
G+ P+ T L VL+AC+H+ + G
Sbjct: 403 SGIRPDITTLLGVLTACSHLAALGHG 428
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 210/469 (44%), Gaps = 63/469 (13%)
Query: 26 AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN--ALISGYLK 83
A ++F MP R+ V++ AMI+GF + L+++M R D + N ++ +
Sbjct: 157 AIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDM--RRIDGLSPNLSTIVGMFPA 214
Query: 84 VGRCEEAARIFEAM--------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVA 135
+GR A R +A+ D+V ++D Y K +I AR +FD +KN V
Sbjct: 215 LGR-AGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVT 273
Query: 136 WTAMVDGYMKVDCFEDGFDLFLSM--RRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
W+AM+ GY++ + ++ ++F M + + ++ C RF G VH
Sbjct: 274 WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCY 333
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEA 253
+ GF D+ + N+II+ Y + G + +A + FS + +D +S+NSLI+G V N EE+
Sbjct: 334 AVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEES 393
Query: 254 YRLFERMPGKDFVSWTTMITG--------------------------------------- 274
+RLF M T + G
Sbjct: 394 FRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDM 453
Query: 275 FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
++ G L+ + +F+ M ++D V+W ++ GF + +EA F M V P+++TL
Sbjct: 454 YTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTL 513
Query: 335 SSVLSASAATATLNQGSQIHAHVVK--MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNI 392
++LSA + + +++G Q+ + + N+ + N + L ++ G + +AY +
Sbjct: 514 LAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573
Query: 393 D-ERNIVSYNSMISG---FAQNGLGEEALNLFRKMKDEGLVPNQITFLS 437
E +I +++S + LG E + +KM+ G + LS
Sbjct: 574 PFEPDIRVLGTLLSACWTYKNAELGNE---VSKKMQSLGETTESLVLLS 619
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 17/291 (5%)
Query: 19 NNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI 78
+ C IY A +F +N V+++AMI G+V M EA E++ M ++ + I
Sbjct: 253 SKCIIY-ARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAI 311
Query: 79 S---------GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
G L GRC + + D+ +++ Y K G + +A F ++
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAVKAGFI-LDLTVQNTIISFYAKYGSLCDAFRQFSEIG 370
Query: 130 EKNVVAWTAMVDGYMKVDCF-EDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGV 188
K+V+++ +++ G + V+C E+ F LF MR G+ + TL + AC G
Sbjct: 371 LKDVISYNSLITGCV-VNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGS 429
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
HG G+ + + N+++ MY + G +D A +VF M KRD VSWN+++ G+ +G
Sbjct: 430 SCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 249 EIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
+EA LF M D V+ +++ S G +++ +LFN M D
Sbjct: 490 LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 316 bits (810), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 188/595 (31%), Positives = 327/595 (54%), Gaps = 21/595 (3%)
Query: 25 EAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWRDSVCSNALI 78
+A ++F +P RNAV++ A++ G+V+ G EA L+ +M P R S C +A
Sbjct: 226 DASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASA 285
Query: 79 S-GYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWT 137
+ G ++ G+ A I M E D + S+++ YCK G + A +FD+M EK+VV W
Sbjct: 286 NMGGVEEGKQSHAIAIVNGM-ELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344
Query: 138 AMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRF 197
++ GY++ ED + MR + ++ +TL L A R + G +V R
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRH 404
Query: 198 GFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLF 257
F+ DI+L ++++ MY + G + +A KVF ++D + WN+L++ Y +G EA RLF
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 258 -----ERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK----DDVTWTAIISGFVN 308
E +P + ++W +I G ++++ ++F M + ++WT +++G V
Sbjct: 465 YGMQLEGVP-PNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQ 523
Query: 309 NEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK-MNMESDVS 367
N EEA + +M +RPN +++ LSA A A+L+ G IH ++++ + S VS
Sbjct: 524 NGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS 583
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEG 427
I+ SLV +Y+KCG++ A ++F + + N+MIS +A G +EA+ L+R ++ G
Sbjct: 584 IETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG 643
Query: 428 LVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEA 487
L P+ IT +VLSACNH G + + F + + +++P EHY MVD+L AG +A
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKA 703
Query: 488 IDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVI 547
+ LI M F+P + +L+ + +L ++ L+E EP+++ YV +S+ Y+V
Sbjct: 704 LRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVE 763
Query: 548 GKKRDGNRVRMKKKLKRIRKSPGCSWIIL--KDKVHLFLAGRKSCLDLKEIEVTL 600
G + ++R K K ++K PGCSWI + ++ VH+F+A K+ + EI++ L
Sbjct: 764 GSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/529 (27%), Positives = 259/529 (48%), Gaps = 64/529 (12%)
Query: 5 TSASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM 64
+S SY +++L N I EA + M RN + I G + +G YE
Sbjct: 34 SSTSYFHRVSSLCKNG-EIKEALSLVTEMDFRN-LRIGPEIYGEILQGCVYE-------- 83
Query: 65 PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREI 124
RD + + LK G + AR +E +V + Y K + A +
Sbjct: 84 ----RDLSTGKQIHARILKNG--DFYAR--NEYIETKLVIF------YAKCDALEIAEVL 129
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F K+ +NV +W A++ ++ E F+ M + ++ + + +ACG
Sbjct: 130 FSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWS 189
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGY 244
R G VHG V + G + + + +S+ MYG+ G +D+A+KVF + R+AV+WN+L+ GY
Sbjct: 190 RFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGY 249
Query: 245 VHNGEIEEAYRLFERM--------------------------PGK-------------DF 265
V NG+ EEA RLF M GK D
Sbjct: 250 VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDN 309
Query: 266 VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRK 325
+ T+++ + G +E + +F+ M EKD VTW IISG+V E+A M +
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369
Query: 326 DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDA 385
++ + +TL++++SA+A T L G ++ + ++ + ESD+ + ++++ +Y+KCG++VDA
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 386 YRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHV 445
++F + E++++ +N++++ +A++GL EAL LF M+ EG+ PN IT+ ++ +
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 446 GLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
G V+E F M++ I P + M++ + + G EAI + M
Sbjct: 490 GQVDEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 148/576 (25%), Positives = 254/576 (44%), Gaps = 94/576 (16%)
Query: 21 CSIYEAFEI-FATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------PARWR-DSV 72
C E E+ F+ + +RN S+AA+I R G+ A +V M P + +V
Sbjct: 120 CDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNV 179
Query: 73 CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKN 132
C + + GR + ++ +E V S+ D Y K G + +A ++FD++P++N
Sbjct: 180 CKACGALKWSRFGRGVHG-YVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRN 238
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
VAW A++ GY++ E+ LF MR+ G+ +T++ A EG Q H
Sbjct: 239 AVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHA 298
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
+ G + D ILG S++ Y ++G ++ A VF M ++D V+WN +ISGYV G +E+
Sbjct: 299 IAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVED 358
Query: 253 AYRLFERMP--------------------------GK-------------DFVSWTTMIT 273
A + + M GK D V +T++
Sbjct: 359 AIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMD 418
Query: 274 GFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLT 333
++ G++ + ++F+ EKD + W +++ + + EA R F M + V PN +T
Sbjct: 419 MYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVIT 478
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
+ ++ + L G A + + M+S I
Sbjct: 479 WNLII-----LSLLRNGQVDEAKDMFLQMQSSGIIP------------------------ 509
Query: 394 ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-----HVGLV 448
N++S+ +M++G QNG EEA+ RKM++ GL PN + LSAC H+G
Sbjct: 510 --NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRT 567
Query: 449 EEGFIYFK-SMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
G+I +L +IE +VD+ + G + +A + S + P + A++
Sbjct: 568 IHGYIIRNLQHSSLVSIETS------LVDMYAKCGDINKAEKVFGSKLYSELP-LSNAMI 620
Query: 508 GAGRTHLNLDLAKLAAQHL--MELEPDSATPYVVLS 541
A + NL A + L + L+PD+ T VLS
Sbjct: 621 SAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLS 656
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 316 bits (810), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 336/635 (52%), Gaps = 28/635 (4%)
Query: 12 MITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM------- 64
+I + N NC +A + ++P S++++I + +F ++ ++ M
Sbjct: 56 LIASYSNYNC-FNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP 114
Query: 65 -----PARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
P ++ VC A +S + KVG+ + + D GSM Y + GR+
Sbjct: 115 DSHVLPNLFK--VC--AELSAF-KVGKQIHCVSCVSGL-DMDAFVQGSMFHMYMRCGRMG 168
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+AR++FD+M +K+VV +A++ Y + C E+ + M G+ N ++ +
Sbjct: 169 DARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFN 228
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSK----RDAV 235
R ++E V + + GF D + +S++ G ++ + + K +D
Sbjct: 229 RSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKC 288
Query: 236 SWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEK- 294
+++I Y +G + LF + + ITG S G ++K++E+F + E+
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348
Query: 295 ---DDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
+ V+WT+II+G N + EA F EM V+PN +T+ S+L A A L G
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGR 408
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNG 411
H V++++ +V + ++L+ +Y+KCG + + +F + +N+V +NS+++GF+ +G
Sbjct: 409 STHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHG 468
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
+E +++F + L P+ I+F S+LSAC VGL +EG+ YFK M Y I+P EHY
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEP 531
+CMV++LGRAG L EA DLI M FEP VWGALL + R N+DLA++AA+ L LEP
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEP 588
Query: 532 DSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCL 591
++ YV+LS++Y+ G + + +R K + ++K+PGCSWI +K++V+ LAG KS
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHP 648
Query: 592 DLKEIEVTLQTISKGT-KEFDWPKHDWSLLGLERD 625
+ +I + ISK K P D++L +E
Sbjct: 649 QIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQ 683
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 214/508 (42%), Gaps = 88/508 (17%)
Query: 88 EEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVD 147
+ ARI ++ + D ++ Y +A + +P+ + ++++++ K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 148 CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGN 207
F +F M G+ +S L LF+ C ++ G Q+H + G D D +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 208 SIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK---- 263
S+ MY R G M +A KVF MS +D V+ ++L+ Y G +EE R+ M
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 264 DFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEML 323
+ VSW +++GF+ G ++++ +F + GF
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHL----------GFC---------------- 249
Query: 324 RKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVV 383
P+Q+T+SSVL + + LN G IH +V+K + D + ++++ +Y K G+V
Sbjct: 250 -----PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 384 DAYRIFTNID-----------------------------------ERNIVSYNSMISGFA 408
+F + E N+VS+ S+I+G A
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG---FIYFKSMKTLYNIE 465
QNG EAL LFR+M+ G+ PN +T S+L AC ++ + G + + L N+
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTHLNLDLAKLAA 523
G + ++D+ + G + + + N M P + W +L+ H
Sbjct: 425 VG----SALIDMYAKCGRINLSQIVFNMM---PTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 524 QHLM--ELEPDSATPYVVLSDLYSVIGK 549
+ LM L+PD ++ + L S G+
Sbjct: 478 ESLMRTRLKPD----FISFTSLLSACGQ 501
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%)
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
+Q HA ++K ++D I L++ YS DA + +I + I S++S+I +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
L +++ +F +M GL+P+ ++ C
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC 126
>sp|Q9FGR2|PP436_ARATH Pentatricopeptide repeat-containing protein At5g59600
OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1
Length = 534
Score = 315 bits (808), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 268/449 (59%), Gaps = 8/449 (1%)
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
+V Y + G+V++AR++FD+MP++++ M+ + +++ D F M + G+ +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
+ + L +A G +H LV +F ++ D + +S+I MY + G + A KVFS
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEK 283
+ ++D V +N++ISGY +N + +EA L + M D ++W +I+GFS N EK
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 284 SIELFNMMP----EKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
E+ +M + D V+WT+IISG V+N Q E+AF F +ML + PN T+ ++L
Sbjct: 237 VSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLP 296
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVS 399
A A + G +IH + V +E ++++L+ +Y KCG + +A +F ++ V+
Sbjct: 297 ACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVT 356
Query: 400 YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMK 459
+NSMI +A +GL ++A+ LF +M+ G + +TF ++L+AC+H GL + G F M+
Sbjct: 357 FNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQ 416
Query: 460 TLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLA 519
Y I P EHYACMVD+LGRAG L EA ++I +M EP VWGALL A R H N++LA
Sbjct: 417 NKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
Query: 520 KLAAQHLMELEPDSATPYVVLSDLYSVIG 548
++AA+HL ELEP+++ ++L+ LY+ G
Sbjct: 477 RIAAKHLAELEPENSGNGLLLTSLYANAG 505
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 199/497 (40%), Gaps = 128/497 (25%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALI-SGY 81
+ +A ++F MP R+ MI R G + E+ + + M ++D + +A I
Sbjct: 67 VLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREM---YKDGLKLDAFIVPSL 123
Query: 82 LKVGRC---EEAARIFEAMV-----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNV 133
LK R E ++ +V E D S++D Y K G V AR++F + E+++
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL 183
Query: 134 VAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGL 193
V + AM+ GY ++ +L M+
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMK--------------------------------- 210
Query: 194 VSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS----KRDAVSWNSLISGYVHNGE 249
G D+I N++I+ + + ++ +++ +M K D VSW S+ISG VHN +
Sbjct: 211 --LLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQ 268
Query: 250 IEEAYRLFERM--------------------------PGKDFVSWTTMITG--------- 274
E+A+ F++M GK+ + +++TG
Sbjct: 269 NEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGY-SVVTGLEDHGFVRS 327
Query: 275 -----FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRP 329
+ G + +++ LF P+K VT+ ++I + N+ ++A F +M +
Sbjct: 328 ALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKL 387
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
+ LT +++L+A + HA + + + +QN YRI
Sbjct: 388 DHLTFTAILTACS-----------HAGLTDLGQNLFLLMQNK--------------YRIV 422
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVE 449
++ Y M+ + G EA + + M+ E P+ + ++L+AC + G +E
Sbjct: 423 PRLEH-----YACMVDLLGRAGKLVEAYEMIKAMRME---PDLFVWGALLAACRNHGNME 474
Query: 450 EGFIYFKSMKTLYNIEP 466
I + K L +EP
Sbjct: 475 LARI---AAKHLAELEP 488
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%)
Query: 349 QGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFA 408
+G +HAH+V + I LV+ Y +CG V+DA ++F + +R+I MI A
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 409 QNGLGEEALNLFRKMKDEGLVPNQITFLSVLSA 441
+NG +E+L+ FR+M +GL + S+L A
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA 126
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 315 bits (806), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 281/526 (53%), Gaps = 44/526 (8%)
Query: 91 ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EKNVVAWTAMVDGYMKVD- 147
A++ E +VV S+ + Y + R+ A F+++P ++N +W ++ GY K
Sbjct: 28 AKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKT 87
Query: 148 -CFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILG 206
C+ D L+ MRR +S L +AC G+ +HGL + G D D +
Sbjct: 88 CCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVA 147
Query: 207 NSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF- 265
S++ MY +LG M+ A KVF + R++V W L+ GY+ + E +RLF M
Sbjct: 148 PSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLA 207
Query: 266 VSWTTMITGFSSKGN---------------------------------------LEKSIE 286
+ T+I + GN L+ + +
Sbjct: 208 LDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARK 267
Query: 287 LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT 346
LF +++ V WT +ISGF E+ EAF F +MLR+ + PNQ TL+++L + ++ +
Sbjct: 268 LFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGS 327
Query: 347 LNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISG 406
L G +H ++++ +E D S + +Y++CGN+ A +F + ERN++S++SMI+
Sbjct: 328 LRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINA 387
Query: 407 FAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEP 466
F NGL EEAL+ F KMK + +VPN +TF+S+LSAC+H G V+EG+ F+SM Y + P
Sbjct: 388 FGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVP 447
Query: 467 GPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHL 526
EHYACMVD+LGRAG + EA I++M +P WGALL A R H +DLA A+ L
Sbjct: 448 EEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 527 MELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCS 572
+ +EP+ ++ YV+LS++Y+ G N VR K +K RK G S
Sbjct: 508 LSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 179/384 (46%), Gaps = 38/384 (9%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDS---------- 71
++ A ++F +P+RN+V + ++ G+++ E L+ M RD+
Sbjct: 159 TMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLM----RDTGLALDALTLI 214
Query: 72 ----VCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDK 127
C N KVG+C I + +++ S++D Y K + AR++F+
Sbjct: 215 CLVKACGNVFAG---KVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET 271
Query: 128 MPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREG 187
++NVV WT ++ G+ K + + FDLF M R + N TL + +C R G
Sbjct: 272 SVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHG 331
Query: 188 VQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHN 247
VHG + R G + D + S I MY R G + A VF MM +R+ +SW+S+I+ + N
Sbjct: 332 KSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGIN 391
Query: 248 GEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM-------PEKDD 296
G EEA F +M ++ V++ ++++ S GN+++ + F M PE++
Sbjct: 392 GLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEH 451
Query: 297 VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAH 356
+ ++ + EA + FI+ + V+P ++LSA ++ +I
Sbjct: 452 --YACMVDLLGRAGEIGEA-KSFIDNM--PVKPMASAWGALLSACRIHKEVDLAGEIAEK 506
Query: 357 VVKMNMESDVSIQNSLVSLYSKCG 380
++ M E S+ L ++Y+ G
Sbjct: 507 LLSMEPEKS-SVYVLLSNIYADAG 529
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 195/422 (46%), Gaps = 71/422 (16%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMS--KRDAVSWNSLISGY-- 244
QVH V GF+ +++LG+S+ Y + +D A F+ + KR+ SWN+++SGY
Sbjct: 25 QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSK 84
Query: 245 ----------------------------------------VHNGEIEEAYRLFERMPGKD 264
+ NG + + + D
Sbjct: 85 SKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDD 144
Query: 265 FVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLR 324
+V+ +++ ++ G +E + ++F+ +P ++ V W ++ G++ + E FR F M
Sbjct: 145 YVA-PSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRD 203
Query: 325 KDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNM--ESDVSIQNSLVSLYSKCGNV 382
+ + LTL ++ A G +H ++ + +SD +Q S++ +Y KC +
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY-LQASIIDMYVKCRLL 262
Query: 383 VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
+A ++F +RN+V + ++ISGFA+ EA +LFR+M E ++PNQ T ++L +C
Sbjct: 263 DNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSC 322
Query: 443 NHVGLVEEGFIYFKSMKTLYNIEPGPE----HYACMVDILGRAGSLAEAIDLINSMTFEP 498
+ +G + G KS+ Y I G E ++ +D+ R G++ A + + M P
Sbjct: 323 SSLGSLRHG----KSVHG-YMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMM---P 374
Query: 499 PPGV--WGALLGA----GRTHLNLD-LAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKR 551
V W +++ A G LD K+ +Q+++ P+S T +V L S G +
Sbjct: 375 ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVV---PNSVT-FVSLLSACSHSGNVK 430
Query: 552 DG 553
+G
Sbjct: 431 EG 432
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 85/177 (48%), Gaps = 8/177 (4%)
Query: 336 SVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID-- 393
++L+ + TLN Q+HA V+ E +V + +SL + Y + + A F I
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 394 ERNIVSYNSMISGFAQNGLG--EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
+RN S+N+++SG++++ + L L+ +M+ + + + AC +GL+E G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 452 -FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
I+ +MK ++ +V++ + G++ A + + + +WG L+
Sbjct: 129 ILIHGLAMKN--GLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSV-LWGVLM 182
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/569 (33%), Positives = 294/569 (51%), Gaps = 43/569 (7%)
Query: 84 VGRCEEA-ARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDG 142
VG CE A + ++ DV + VD + K V A ++F++MPE++ W AM+ G
Sbjct: 68 VGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG 127
Query: 143 YMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYD 202
+ + + F LF MR + +S+T+ L ++ + +H + R G D
Sbjct: 128 FCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ 187
Query: 203 IILGNSIITMYGRLGFMDEANKVFSMMSK--RDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+ + N+ I+ YG+ G +D A VF + + R VSWNS+ Y GE +A+ L+ M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 261 ---------------------------------------PGKDFVSWTTMITGFSSKGNL 281
+D + T I+ +S +
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 282 EKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSAS 341
+ LF++M + V+WT +ISG+ +EA F M++ +P+ +TL S++S
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 342 AATATLNQGSQIHAHVVKMNMESD-VSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSY 400
+L G I A + D V I N+L+ +YSKCG++ +A IF N E+ +V++
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 401 NSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKT 460
+MI+G+A NG+ EAL LF KM D PN ITFL+VL AC H G +E+G+ YF MK
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 461 LYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAK 520
+YNI PG +HY+CMVD+LGR G L EA++LI +M+ +P G+WGALL A + H N+ +A+
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 521 LAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKV 580
AA+ L LEP A PYV ++++Y+ G R+R K + I+K PG S I + K
Sbjct: 548 QAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Query: 581 HLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
H F G ++ + I TL +S K+
Sbjct: 608 HSFTVGEHGHVENEVIYFTLNGLSLFAKD 636
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 196/439 (44%), Gaps = 64/439 (14%)
Query: 155 LFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYG 214
LF M+RGG N+ T + +AC R VH + + F D+ +G + + M+
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 215 RLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDFVSWTTMITG 274
+ +D A KVF M +RDA +WN+++SG+ +G ++A+ LF M + + +
Sbjct: 99 KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT 158
Query: 275 FSSKGNLEKSIELFNMMP-----------------------------------------E 293
+ EKS++L M +
Sbjct: 159 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 218
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
+ V+W ++ + + +AF + MLR++ +P+ T ++ ++ TL QG I
Sbjct: 219 RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLI 278
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLG 413
H+H + + + D+ N+ +S+YSK + A +F + R VS+ MISG+A+ G
Sbjct: 279 HSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM 338
Query: 414 EEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYAC 473
+EAL LF M G P+ +T LS++S C G +E G I+ + Y C
Sbjct: 339 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG----------KWIDARADIYGC 388
Query: 474 ----------MVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL-GAGRTHLNLDLAKLA 522
++D+ + GS+ EA D+ ++ T E W ++ G + L+ KL
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDN-TPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 523 AQHL-MELEPDSATPYVVL 540
++ + ++ +P+ T VL
Sbjct: 448 SKMIDLDYKPNHITFLAVL 466
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 128/515 (24%), Positives = 223/515 (43%), Gaps = 95/515 (18%)
Query: 22 SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGY 81
S+ A ++F MP R+A ++ AM++GF + G +A L+ M R + + +
Sbjct: 102 SVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM--RLNEITPDSVTVMTL 159
Query: 82 LKVGRCEEAARIFEAM--------VEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP--EK 131
++ E++ ++ EAM V+ V + + Y K G + A+ +F+ + ++
Sbjct: 160 IQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDR 219
Query: 132 NVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVH 191
VV+W +M Y D F L+ M R + T L +C +G +H
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIH 279
Query: 192 GLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIE 251
G D DI N+ I+MY + A +F +M+ R VSW +ISGY G+++
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMD 339
Query: 252 EAYRLFERM----PGKDFVSWTTMITG--------------------------------- 274
EA LF M D V+ ++I+G
Sbjct: 340 EALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNAL 399
Query: 275 ---FSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
+S G++ ++ ++F+ PEK VTWT +I+G+ N + EA + F +M+ D +PN
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNH 459
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
+T +VL A A + +L +G + + H++K Y I
Sbjct: 460 ITFLAVLQACAHSGSLEKGWE-YFHIMK------------------------QVYNISPG 494
Query: 392 IDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN---HVGLV 448
+D Y+ M+ + G EEAL L R M + P+ + ++L+AC +V +
Sbjct: 495 LDH-----YSCMVDLLGRKGKLEEALELIRNMSAK---PDAGIWGALLNACKIHRNVKIA 546
Query: 449 EEGFIYFKSMKTLYNIEPG-PEHYACMVDILGRAG 482
E+ + ++L+N+EP Y M +I AG
Sbjct: 547 EQ------AAESLFNLEPQMAAPYVEMANIYAAAG 575
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 77/143 (53%)
Query: 299 WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVV 358
W I VN E+ F EM R PN T V A A A + +HAH++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 359 KMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALN 418
K SDV + + V ++ KC +V A ++F + ER+ ++N+M+SGF Q+G ++A +
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 419 LFRKMKDEGLVPNQITFLSVLSA 441
LFR+M+ + P+ +T ++++ +
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQS 162
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 10 NAMI-TALIN--NNC-SIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNM- 64
N MI ALI+ + C SI+EA +IF P + V++ MI G+ G+F EA +L+ M
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 65 -----PARWRDSVCSNALISGYLKVGRCEEAARIFEAM-----VEKDVVAWGSMVDGYCK 114
P + + A++ G E+ F M + + + MVD +
Sbjct: 452 DLDYKP----NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 507
Query: 115 KGRVIEAREIFDKMPEK-NVVAWTAMVDG 142
KG++ EA E+ M K + W A+++
Sbjct: 508 KGKLEEALELIRNMSAKPDAGIWGALLNA 536
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 313 bits (803), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/630 (31%), Positives = 323/630 (51%), Gaps = 56/630 (8%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
N+ + +LIN ++ A ++F MP + VS+ ++I +V EA L+ M R
Sbjct: 44 NSHLRSLINAG-NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAM--RVV 100
Query: 70 DSVCS--NALISGYLKVGRCEEAARI----------FEAMVEKDVVAWGSMVDGYCKKGR 117
D S +++S LK C +++ I + + V S++D Y + G+
Sbjct: 101 DHAVSPDTSVLSVVLKA--CGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGK 158
Query: 118 VIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEA 177
+ ++ +F +MP +N V WTA++ G + +++G F M R ++ T I +A
Sbjct: 159 IDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKA 218
Query: 178 CGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSW 237
C + + G +H V GF + + NS+ TMY G M + +F MS+RD VSW
Sbjct: 219 CAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSW 278
Query: 238 NSLISGYVHNGEIEEAYRLFERMPG-------KDFVS------------W---------- 268
SLI Y G+ +A F +M + F S W
Sbjct: 279 TSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLS 338
Query: 269 ----------TTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRW 318
+M+ +S+ GNL + LF M +D ++W+ II G+ EE F++
Sbjct: 339 LGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKY 398
Query: 319 FIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK 378
F M + +P L+S+LS S A + G Q+HA + +E + ++++SL+++YSK
Sbjct: 399 FSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSK 458
Query: 379 CGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSV 438
CG++ +A IF D +IVS +MI+G+A++G +EA++LF K G P+ +TF+SV
Sbjct: 459 CGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISV 518
Query: 439 LSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEP 498
L+AC H G ++ GF YF M+ YN+ P EHY CMVD+L RAG L++A +IN M+++
Sbjct: 519 LTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKK 578
Query: 499 PPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRM 558
VW LL A + +++ + AA+ ++EL+P AT V L+++YS G + VR
Sbjct: 579 DDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRK 638
Query: 559 KKKLKRIRKSPGCSWIILKDKVHLFLAGRK 588
K K + K PG S I +KD V F++G +
Sbjct: 639 NMKAKGVIKEPGWSSIKIKDCVSAFVSGDR 668
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 313 bits (803), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 287/535 (53%), Gaps = 42/535 (7%)
Query: 116 GRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILF 175
G + AR++FD +P + W A++ GY + + F+D ++ +M+ ++ +S T L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 176 EACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS--MMSKRD 233
+AC + G VH V R GFD D+ + N +I +Y + + A VF + +R
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPG----KDFVSWTTMITGFSSKGNLE--KSIE- 286
VSW +++S Y NGE EA +F +M D+V+ +++ F+ +L+ +SI
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 287 --------------------------------LFNMMPEKDDVTWTAIISGFVNNEQYEE 314
LF+ M + + W A+ISG+ N E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A F EM+ KDVRP+ ++++S +SA A +L Q ++ +V + + DV I ++L+
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+++KCG+V A +F +R++V +++MI G+ +G EA++L+R M+ G+ PN +T
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
FL +L ACNH G+V EG+ +F M + I P +HYAC++D+LGRAG L +A ++I M
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
+P VWGALL A + H +++L + AAQ L ++P + YV LS+LY+
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Query: 555 RVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKE 609
VR++ K K + K GCSW+ ++ ++ F G KS +EIE ++ I KE
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 170/367 (46%), Gaps = 57/367 (15%)
Query: 189 QVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNG 248
Q+H + G + L +I G + A +VF + + WN++I GY N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 249 EIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKS----IELFNM---------- 290
++A ++ M D ++ ++ S +L+ ++F +
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 291 -----------------------MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDV 327
+PE+ V+WTAI+S + N + EA F +M + DV
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 328 RPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYR 387
+P+ + L SVL+A L QG IHA VVKM +E + + SL ++Y+KCG V A
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278
Query: 388 IFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGL 447
+F + N++ +N+MISG+A+NG EA+++F +M ++ + P+ I+ S +SAC VG
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 448 VEEGFIYFKSMKTLYNIEPGPEHY-------ACMVDILGRAGSLAEAIDLINSMTFEPPP 500
+E+ +++Y G Y + ++D+ + GS+ E L+ T +
Sbjct: 339 LEQA-------RSMYEY-VGRSDYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDV 389
Query: 501 GVWGALL 507
VW A++
Sbjct: 390 VVWSAMI 396
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 188/429 (43%), Gaps = 52/429 (12%)
Query: 12 MITALINNNCS---IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP-AR 67
+IT LI+ + S I A ++F +P + A+I G+ R F +A +Y NM AR
Sbjct: 55 LITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 68 WR-DSVCSNALISG-----YLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEA 121
DS L+ +L++GR A++F + DV ++ Y K R+ A
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVH-AQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173
Query: 122 REIFD--KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
R +F+ +PE+ +V+WTA+V Y + + ++F MR+ + + + L + A
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT 233
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
++G +H V + G + + L S+ TMY + G + A +F M + + WN+
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEK------------ 283
+ISGY NG EA +F M KD +S T+ I+ + G+LE+
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 284 -------------------SIE----LFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
S+E +F+ ++D V W+A+I G+ + + EA +
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
M R V PN +T +L A + + +G + + ++ L + G
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAG 473
Query: 381 NVVDAYRIF 389
++ AY +
Sbjct: 474 HLDQAYEVI 482
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 142/276 (51%), Gaps = 9/276 (3%)
Query: 237 WNSLISGYVHNGEIEEAY-RLFERMPGKDFVSW--TTMITGFSSKGNLEKSIELFNMMPE 293
+ SLI H ++++ + RL + G F + T +I SS G++ + ++F+ +P
Sbjct: 24 YASLIDSATHKAQLKQIHARLL--VLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPR 81
Query: 294 KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQI 353
W AII G+ N +++A + M V P+ T +L A + + L G +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 354 HAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN--IDERNIVSYNSMISGFAQNG 411
HA V ++ ++DV +QN L++LY+KC + A +F + ER IVS+ +++S +AQNG
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 412 LGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHY 471
EAL +F +M+ + P+ + +SVL+A + +++G S+ + +E P+
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM-GLEIEPDLL 260
Query: 472 ACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALL 507
+ + + G +A A L + M P +W A++
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 43/264 (16%)
Query: 9 YNAMITALINNNCSIYEAFEIFATMPMRN----AVSYAAMITGFVRRGMFYEAEELYVNM 64
+NAMI+ N + EA ++F M ++ +S + I+ + G +A +Y +
Sbjct: 291 WNAMISGYAKNGYA-REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 65 P-ARWRDSV-CSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAR 122
+ +RD V S+ALI + K G E A +F+ +++DVV W +M+ GY GR EA
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA- 408
Query: 123 EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFF 182
L+ +M RGG+ N +T L AC
Sbjct: 409 ------------------------------ISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 183 RYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVS-WNSLI 241
REG ++ + +I + GR G +D+A +V M + V+ W +L+
Sbjct: 439 MVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
Query: 242 SGYVHNGEIE----EAYRLFERMP 261
S + +E A +LF P
Sbjct: 499 SACKKHRHVELGEYAAQQLFSIDP 522
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 313 bits (801), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 291/567 (51%), Gaps = 46/567 (8%)
Query: 101 DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMR 160
DV S++ Y + V AR +FD+MP +++ +W AM+ GY C L++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY----CQSGNAKEALTLS 239
Query: 161 RGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMD 220
G A +S+T+ L AC + GV +H + G + ++ + N +I +Y G +
Sbjct: 240 NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 221 EANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PG------------ 262
+ KVF M RD +SWNS+I Y N + A LF+ M P
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 263 ----------------------KDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWT 300
+D ++ ++ G ++ + +FN +P D ++W
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 301 AIISGFVNNEQYEEAFRWFIEMLRK-DVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
IISG+ N EA + M + ++ NQ T SVL A + L QG ++H ++K
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+ DV + SL +Y KCG + DA +F I N V +N++I+ +G GE+A+ L
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 539
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F++M DEG+ P+ ITF+++LSAC+H GLV+EG F+ M+T Y I P +HY CMVD+ G
Sbjct: 540 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYG 599
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
RAG L A+ I SM+ +P +WGALL A R H N+DL K+A++HL E+EP+ +V+
Sbjct: 600 RAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVL 659
Query: 540 LSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVT 599
LS++Y+ GK + +R K +RK+PG S + + +KV +F G ++ +E+
Sbjct: 660 LSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE 719
Query: 600 LQTISKGTKEFDW-PKHDWSLLGLERD 625
L + K + P H + L +E D
Sbjct: 720 LTALQAKLKMIGYVPDHRFVLQDVEDD 746
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 236/505 (46%), Gaps = 56/505 (11%)
Query: 82 LKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
L+ +C A + ++ +V +V+ YC G V AR FD + ++V AW M+
Sbjct: 67 LQSAKCLHARLVVSKQIQ-NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 142 GYMKVDCFEDGFDLF-LSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFD 200
GY + + F L M G+ + T + +AC +G ++H L +FGF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFM 182
Query: 201 YDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
+D+ + S+I +Y R + A +F M RD SWN++ISGY +G +EA L +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSI----------------------------------- 285
D V+ ++++ + G+ + +
Sbjct: 243 RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATA 345
++F+ M +D ++W +II + NEQ A F EM ++P+ LTL S+ S +
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 346 TLNQGSQIHAHVVKMN-MESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
+ + ++ D++I N++V +Y+K G V A +F + +++S+N++I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 405 SGFAQNGLGEEALNLFRKMKDEG-LVPNQITFLSVLSACNHVGLVEEGF-IYFKSMKTLY 462
SG+AQNG EA+ ++ M++EG + NQ T++SVL AC+ G + +G ++ + +K
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 463 NIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGV----WGALLGAGRTHLNLDL 518
++ + D+ G+ G L +A+ L F P V W L+ H + +
Sbjct: 483 YLDVFV--VTSLADMYGKCGRLEDALSL-----FYQIPRVNSVPWNTLIACHGFHGHGEK 535
Query: 519 AKLAAQHLME--LEPDSATPYVVLS 541
A + + +++ ++PD T +LS
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 224/527 (42%), Gaps = 88/527 (16%)
Query: 29 IFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCE 88
+F MP+R+ S+ AMI+G+ + G EA L ++ R DSV +L+S + G
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEA--LTLSNGLRAMDSVTVVSLLSACTEAGDFN 264
Query: 89 EAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYM 144
I + E ++ ++D Y + GR+ + +++FD+M +++++W +++ Y
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 145 KVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFG-FDYDI 203
+ LF MR + + +TL L + R V G R G F DI
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
+GN+++ MY +LG +D A VF+ + D +SWN++ISGY NG EA ++ M +
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE 444
Query: 264 DFV-----SWTTMITGFSSK-----------------------------------GNLEK 283
+ +W +++ S G LE
Sbjct: 445 GEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLED 504
Query: 284 SIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
++ LF +P + V W +I+ + E+A F EML + V+P+ +T ++LSA +
Sbjct: 505 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 564
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
+ +++G M++D I SL Y M
Sbjct: 565 SGLVDEGQWCFEM-----MQTDYGITPSL-------------------------KHYGCM 594
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYN 463
+ + + G E AL + M L P+ + ++LSAC G V+ G I + + L+
Sbjct: 595 VDMYGRAGQLETALKFIKSMS---LQPDASIWGALLSACRVHGNVDLGKI---ASEHLFE 648
Query: 464 IEPGPEHYACMVDILGRAGSLAEAIDLINSMT----FEPPPGVWGAL 506
+EP Y ++ + + E +D I S+ PG W ++
Sbjct: 649 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG-WSSM 694
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 313 bits (801), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 298/554 (53%), Gaps = 46/554 (8%)
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ Y +KG V EAR +FD+MP+++VVAWTAM+ GY + ++ F M + G +
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF-MDEANKV 225
N TL+ + ++C G VHG+V + G + + + N+++ MY M+ A +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 226 FSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------------------------- 260
F + ++ V+W +LI+G+ H G+ +++++M
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSV 229
Query: 261 -PGKDFVSWTTMITGFSSK--------------GNLEKSIELFNMMPEKDDVTWTAIISG 305
GK + + + GF S G L ++ F+ M +KD +TW +IS
Sbjct: 230 TTGKQ-IHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE 288
Query: 306 FVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESD 365
++ EA F + PN T +S+++A A A LN G Q+H + + +
Sbjct: 289 LERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN 347
Query: 366 VSIQNSLVSLYSKCGNVVDAYRIFTNI-DERNIVSYNSMISGFAQNGLGEEALNLFRKMK 424
V + N+L+ +Y+KCGN+ D+ R+F I D RN+VS+ SM+ G+ +G G EA+ LF KM
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 425 DEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSL 484
G+ P++I F++VLSAC H GLVE+G YF M++ Y I P + Y C+VD+LGRAG +
Sbjct: 408 SSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKI 467
Query: 485 AEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDL-AKLAAQHLMELEPDSATPYVVLSDL 543
EA +L+ M F+P WGA+LGA + H + L ++LAA+ +MEL+P YV+LS +
Sbjct: 468 GEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYI 527
Query: 544 YSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTI 603
Y+ GK D RVR ++ +K G SWI+++++V F K C + + L +
Sbjct: 528 YAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLL 587
Query: 604 SKGTKEFDW-PKHD 616
+ T+E + P+ D
Sbjct: 588 IEETREAGYVPELD 601
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 141/288 (48%), Gaps = 41/288 (14%)
Query: 204 ILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK 263
IL ++I Y G ++EA +F M RD V+W ++I+GY + A+ F M +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 264 -------------------DFVSWTTMITGFSSKGNLEKSIELFNMMPE----------- 293
+++ ++ G K +E S+ + N M
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 294 ----------KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAA 343
K+DVTWT +I+GF + + + +ML ++ ++ + ASA+
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 344 TATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSM 403
++ G QIHA V+K +S++ + NS++ LY +CG + +A F +++++++++N++
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 404 ISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEG 451
IS ++ EAL +F++ + +G VPN TF S+++AC ++ + G
Sbjct: 286 ISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCG 332
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 179/397 (45%), Gaps = 24/397 (6%)
Query: 10 NAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWR 69
NAM+ + ++ A IF + ++N V++ +ITGF G ++Y M
Sbjct: 150 NAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENA 209
Query: 70 DSV--CSNALISGYLKVGRCEEAARIFEAMVEK----DVVAWGSMVDGYCKKGRVIEARE 123
+ C + + +I +++++ ++ S++D YC+ G + EA+
Sbjct: 210 EVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKH 269
Query: 124 IFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFR 183
F +M +K+++ W ++ + D E +F G N T T L AC
Sbjct: 270 YFHEMEDKDLITWNTLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAA 328
Query: 184 YREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS-MMSKRDAVSWNSLIS 242
G Q+HG + R GF+ ++ L N++I MY + G + ++ +VF ++ +R+ VSW S++
Sbjct: 329 LNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMI 388
Query: 243 GYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLEKSIELFNMM------- 291
GY +G EA LF++M D + + +++ G +EK ++ FN+M
Sbjct: 389 GYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGIN 448
Query: 292 PEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGS 351
P++D + ++ + EA+ +E R +P++ T ++L A A S
Sbjct: 449 PDRD--IYNCVVDLLGRAGKIGEAYE-LVE--RMPFKPDESTWGAILGACKAHKHNGLIS 503
Query: 352 QIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
++ A V V L +Y+ G VD R+
Sbjct: 504 RLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARV 540
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%), Gaps = 24/246 (9%)
Query: 261 PGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFI 320
P K + T +I + KG +E++ LF+ MP++D V WTA+I+G+ ++ A+ F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 321 EMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCG 380
EM+++ PN+ TLSSVL + L G+ +H VVK+ ME + + N+++++Y+ C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 381 NVVDAY-RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKM--KDEGLVPNQITFLS 437
++A IF +I +N V++ ++I+GF G G L ++++M ++ + P IT
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 438 VLSAC---------NHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAI 488
SA H +++ G F+S + N ++D+ R G L+EA
Sbjct: 221 RASASIDSVTTGKQIHASVIKRG---FQSNLPVMN---------SILDLYCRCGYLSEAK 268
Query: 489 DLINSM 494
+ M
Sbjct: 269 HYFHEM 274
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 177/417 (42%), Gaps = 55/417 (13%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+ EA +F MP R+ V++ AMITG+ A E + M + + +S L
Sbjct: 61 VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP--NEFTLSSVL 118
Query: 83 KVGRCEEAARIFEAMVEKDVVAWG---------SMVDGYCKKGRVIEAR-EIFDKMPEKN 132
K R + A+V VV G +M++ Y +EA IF + KN
Sbjct: 119 KSCR-NMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKN 177
Query: 133 VVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHG 192
V WT ++ G+ + G ++ M +TI A G Q+H
Sbjct: 178 DVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHA 237
Query: 193 LVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEE 252
V + GF ++ + NSI+ +Y R G++ EA F M +D ++WN+LIS + + E
Sbjct: 238 SVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSE 296
Query: 253 AYRLFERMPGKDFV----SWTTMITG---------------------------------- 274
A +F+R + FV ++T+++
Sbjct: 297 ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALID 356
Query: 275 -FSSKGNLEKSIELFN-MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQL 332
++ GN+ S +F ++ ++ V+WT+++ G+ ++ EA F +M+ +RP+++
Sbjct: 357 MYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRI 416
Query: 333 TLSSVLSASAATATLNQGSQ-IHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
+VLSA + +G + + + + D I N +V L + G + +AY +
Sbjct: 417 VFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYEL 473
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 312 bits (800), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 190/649 (29%), Positives = 333/649 (51%), Gaps = 53/649 (8%)
Query: 28 EIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMP--ARWRDSVCSNALISGYLKVG 85
++F M RN V++ +I+G+ R M E L++ M +S A + + G
Sbjct: 149 KVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Query: 86 RCEEAARIFEAMV----EKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVD 141
++ +V +K + S+++ Y K G V +AR +FDK K+VV W +M+
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 142 GYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDY 201
GY + +F SMR + + + + + C R Q+H V ++GF +
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 202 DIILGNSIITMYGRLGFMDEANKVFSMMS-KRDAVSWNSLISGYVHNGEIEEAYRLFERM 260
D + +++ Y + M +A ++F + + VSW ++ISG++ N EEA LF M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 261 PGKDF-----------------------------------VSWTTMITGFSSKGNLEKSI 285
K T ++ + G +E++
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 286 ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAAT- 344
++F+ + +KD V W+A+++G+ + E A + F E+ + ++PN+ T SS+L+ AAT
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 345 ATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMI 404
A++ QG Q H +K ++S + + ++L+++Y+K GN+ A +F E+++VS+NSMI
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 405 SGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNI 464
SG+AQ+G +AL++F++MK + + +TF+ V +AC H GLVEEG YF M I
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628
Query: 465 EPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQ 524
P EH +CMVD+ RAG L +A+ +I +M +W +L A R H +L +LAA+
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAE 688
Query: 525 HLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFL 584
++ ++P+ + YV+LS++Y+ G ++ +VR + ++K PG SWI +K+K + FL
Sbjct: 689 KIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFL 748
Query: 585 AGRKSCLDLKEIEVTLQTISKGTKEFDWPKHDWSLLGLERDWSYTADNI 633
AG +S +I + L+ +S K+ LG E D SY +I
Sbjct: 749 AGDRSHPLKDQIYMKLEDLSTRLKD----------LGYEPDTSYVLQDI 787
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 231/468 (49%), Gaps = 54/468 (11%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYL 82
+Y A +F P R+ SY +++ GF R G EA+ L++N+ + CS + S L
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS--IFSSVL 100
Query: 83 KVGR--CEEA-ARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVV 134
KV C+E R K DV S+VD Y K + R++FD+M E+NVV
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 135 AWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLV 194
WT ++ GY + ++ LF+ M+ G NS T G+QVH +V
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 195 SRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAY 254
+ G D I + NS+I +Y + G + +A +F + V+WNS+ISGY NG EA
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 255 RLFE-------RMPGKDFVS--------------------------------WTTMITGF 275
+F R+ F S T ++ +
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 276 SSKGNLEKSIELFNMMPEKDD-VTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTL 334
S + ++ LF + + V+WTA+ISGF+ N+ EEA F EM RK VRPN+ T
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 335 SSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDE 394
S +L+A + S++HA VVK N E ++ +L+ Y K G V +A ++F+ ID+
Sbjct: 401 SVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 456
Query: 395 RNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSAC 442
++IV++++M++G+AQ G E A+ +F ++ G+ PN+ TF S+L+ C
Sbjct: 457 KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 205/443 (46%), Gaps = 54/443 (12%)
Query: 111 GYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN--- 167
G R+ A +FDK P ++ ++ +++ G+ + ++ LFL++ R GM +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 168 -SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
S L + C F G Q+H +FGF D+ +G S++ Y + + KVF
Sbjct: 96 FSSVLKVSATLCDELF----GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMP--GKDFVSWT--------------- 269
M +R+ V+W +LISGY N +E LF RM G S+T
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 270 ----------------------TMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
++I + GN+ K+ LF+ K VTW ++ISG+
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVS 367
N EA F M VR ++ + +SV+ A L Q+H VVK D +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 368 IQNSLVSLYSKCGNVVDAYRIFTNID-ERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
I+ +L+ YSKC ++DA R+F I N+VS+ +MISGF QN EEA++LF +MK +
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
G+ PN+ T+ +L+A + ++ ++ + +KT N E ++D + G + E
Sbjct: 392 GVRPNEFTYSVILTA---LPVISPSEVHAQVVKT--NYERSSTVGTALLDAYVKLGKVEE 446
Query: 487 AIDLINSMTFEPPPGVWGALLGA 509
A + + + + W A+L
Sbjct: 447 AAKVFSGID-DKDIVAWSAMLAG 468
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/638 (31%), Positives = 328/638 (51%), Gaps = 59/638 (9%)
Query: 19 NNCSIYEAFEIFATMPMRNAVS-YAAMITGFVRRGMFYEAEELY---VNMPARWRDSVCS 74
++CS FE F +R+ V + ++++G+ + MF++ E++ +N DS
Sbjct: 54 DHCSARHVFENF---DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTF 110
Query: 75 NALISGYLKVGRCEEAARIFEAMVEK-----DVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
+I Y +GR E R+ +V K DVV S+V Y K + ++FD+MP
Sbjct: 111 PNVIKAYGALGR-EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP 169
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQ 189
E++V +W ++ + + E +LF M G NS++LT+ AC R G +
Sbjct: 170 ERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKE 229
Query: 190 VHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGE 249
+H + GF+ D + ++++ MYG+ ++ A +VF M ++ V+WNS+I GYV G+
Sbjct: 230 IHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD 289
Query: 250 IEEAYRLFERM------PGKDFVSWTTMITGFSSKGNLEKS------------------- 284
+ + RM P + + T+++ S NL
Sbjct: 290 SKSCVEILNRMIIEGTRPSQ--TTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVN 347
Query: 285 ---IELFNMMPE-----------KDDV--TWTAIISGFVNNEQYEEAFRWFIEMLRKDVR 328
I+L+ E + DV +W +IS +++ + +A + +M+ V+
Sbjct: 348 CSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVK 407
Query: 329 PNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRI 388
P+ +T +SVL A + A L +G QIH + + +E+D + ++L+ +YSKCGN +A+RI
Sbjct: 408 PDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRI 467
Query: 389 FTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLV 448
F +I ++++VS+ MIS + +G EAL F +M+ GL P+ +T L+VLSAC H GL+
Sbjct: 468 FNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLI 527
Query: 449 EEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG--VWGAL 506
+EG +F M++ Y IEP EHY+CM+DILGRAG L EA ++I T E + L
Sbjct: 528 DEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ-TPETSDNAELLSTL 586
Query: 507 LGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIR 566
A HL L A+ L+E PD A+ Y+VL +LY+ RVR+K K +R
Sbjct: 587 FSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLR 646
Query: 567 KSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTIS 604
K PGCSWI + DKV F A +S L + + L +S
Sbjct: 647 KKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLS 684
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 225/495 (45%), Gaps = 49/495 (9%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP-EKNVVAWTAMVDGYMKVDCFE 150
RI + +DVV S+++ Y AR +F+ +V W +++ GY K F
Sbjct: 29 RILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFH 88
Query: 151 DGFDLFLSMRRGGMAF-NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSI 209
D ++F + + +S T + +A G R G +H LV + G+ D+++ +S+
Sbjct: 89 DTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSL 148
Query: 210 ITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF---- 265
+ MY + + + +VF M +RD SWN++IS + +GE E+A LF RM F
Sbjct: 149 VGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNS 208
Query: 266 VSWTTMITGFS----------------SKG-------------------NLEKSIELFNM 290
VS T I+ S KG LE + E+F
Sbjct: 209 VSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQK 268
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
MP K V W ++I G+V + M+ + RP+Q TL+S+L A + + L G
Sbjct: 269 MPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG 328
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQN 410
IH +V++ + +D+ + SL+ LY KCG A +F+ + S+N MIS +
Sbjct: 329 KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISV 388
Query: 411 GLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEH 470
G +A+ ++ +M G+ P+ +TF SVL AC+ + +E+G S+ +E
Sbjct: 389 GNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE-SRLETDELL 447
Query: 471 YACMVDILGRAGSLAEAIDLINSMTFEPPPGV--WGALLGAGRTH--LNLDLAKLAAQHL 526
+ ++D+ + G+ EA + NS+ P V W ++ A +H L +
Sbjct: 448 LSALLDMYSKCGNEKEAFRIFNSI---PKKDVVSWTVMISAYGSHGQPREALYQFDEMQK 504
Query: 527 MELEPDSATPYVVLS 541
L+PD T VLS
Sbjct: 505 FGLKPDGVTLLAVLS 519
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Query: 334 LSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNID 393
LS + + +T +L + +H ++ + + DV + SL+++Y C + A +F N D
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 394 ER-NIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL-VPNQITFLSVLSACNHVG 446
R ++ +NS++SG+++N + + L +F+++ + + VP+ TF +V+ A +G
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/554 (30%), Positives = 286/554 (51%), Gaps = 75/554 (13%)
Query: 125 FDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRY 184
F + V+AW +++ + F F+ MR G + + ++C
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 185 REGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFM------------------------- 219
R G VHG + R G D D+ GN+++ MY +L M
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 220 -----------DEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKD---- 264
D +VF +M ++D VS+N++I+GY +G E+A R+ M D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 265 ----------FVSWTTMITG-------------------------FSSKGNLEKSIELFN 289
F + +I G ++ +E S +F+
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 290 MMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQ 349
+ +D ++W ++++G+V N +Y EA R F +M+ V+P + SSV+ A A ATL+
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 350 GSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQ 409
G Q+H +V++ S++ I ++LV +YSKCGN+ A +IF ++ + VS+ ++I G A
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 410 NGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPE 469
+G G EA++LF +MK +G+ PNQ+ F++VL+AC+HVGLV+E + YF SM +Y + E
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481
Query: 470 HYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMEL 529
HYA + D+LGRAG L EA + I+ M EP VW LL + H NL+LA+ A+ + +
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 541
Query: 530 EPDSATPYVVLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKS 589
+ ++ YV++ ++Y+ G+ ++ ++R++ + K +RK P CSWI +K+K H F++G +S
Sbjct: 542 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRS 601
Query: 590 CLDLKEIEVTLQTI 603
+ +I L+ +
Sbjct: 602 HPSMDKINEFLKAV 615
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 182/415 (43%), Gaps = 112/415 (26%)
Query: 92 RIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFED 151
R+FE M KDVV++ +++ GY + G +ED
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGM-------------------------------YED 225
Query: 152 GFDLFLSMRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIIT 211
+ M + +S TL+ + + +G ++HG V R G D D+ +G+S++
Sbjct: 226 ALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVD 285
Query: 212 MYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERM------PGKDF 265
MY + ++++ +VFS + RD +SWNSL++GYV NG EA RLF +M PG
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA-- 343
Query: 266 VSWTTMIT---------------------GFSSK--------------GNLEKSIELFNM 290
V+++++I GF S GN++ + ++F+
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 291 MPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATAT---- 346
M D+V+WTAII G + EA F EM R+ V+PNQ+ +VL+A +
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Query: 347 ------------LNQGSQIHAHVV-----------------KMNMESDVSIQNSLVSLYS 377
LNQ + +A V KM +E S+ ++L+S S
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Query: 378 KCGNV----VDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGL 428
N+ A +IFT +D N+ +Y M + +A NG +E L +M+ +GL
Sbjct: 524 VHKNLELAEKVAEKIFT-VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 112/274 (40%), Gaps = 70/274 (25%)
Query: 205 LGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS---LISGYVHNGEIEEAYRLFERMP 261
L ++I R+ +A ++ + + ++S S +IS Y + + EA LF+ +
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLK 66
Query: 262 GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIE 321
++W ++I F+ + + +A F+E
Sbjct: 67 SPPVLAWKSVIRCFT-------------------------------DQSLFSKALASFVE 95
Query: 322 MLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSK--- 378
M P+ SVL + L G +H +V++ M+ D+ N+L+++Y+K
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLG 155
Query: 379 ------CGNVVD---------------------------AYRIFTNIDERNIVSYNSMIS 405
GNV D R+F + +++VSYN++I+
Sbjct: 156 MGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIA 215
Query: 406 GFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVL 439
G+AQ+G+ E+AL + R+M L P+ T SVL
Sbjct: 216 GYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 269/481 (55%), Gaps = 45/481 (9%)
Query: 174 LFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRD 233
+ + C R E HG + R + D+ L N +I Y + GF++ A +VF M +R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 234 AVSWNSLISGYVHNGEIEEAYRLFERMPGKDF---------------------------- 265
VSWN++I Y N EA +F M + F
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 266 -----------VSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEE 314
T ++ ++ G ++ ++++F M +K VTW+++++G+V N+ YEE
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 315 AFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVS 374
A + R + NQ TLSSV+ A + A L +G Q+HA + K S+V + +S V
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 375 LYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQIT 434
+Y+KCG++ ++Y IF+ + E+N+ +N++ISGFA++ +E + LF KM+ +G+ PN++T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 435 FLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSM 494
F S+LS C H GLVEEG +FK M+T Y + P HY+CMVDILGRAG L+EA +LI S+
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 495 TFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSVIGKKRDGN 554
F+P +WG+LL + R + NL+LA++AA+ L ELEP++A +V+LS++Y+ +
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA---NKQWE 483
Query: 555 RVRMKKKLKR---IRKSPGCSWIILKDKVHLFLAGRKSCLDLKEIEVTLQTISKGTKEFD 611
+ +KL R ++K G SWI +KDKVH F G ++EI TL + ++F
Sbjct: 484 EIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 543
Query: 612 W 612
+
Sbjct: 544 Y 544
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 179/386 (46%), Gaps = 51/386 (13%)
Query: 55 YEAEELYVNMPARWRDSVCSNALISGYLKV----GRCEEA----ARIFEAMVEKDVVAWG 106
Y+ EE+ P R+ + + L+ L++ G EA +I +E DV
Sbjct: 44 YDQEEVS---PGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLN 100
Query: 107 SMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF 166
+++ Y K G V AR++FD M E+++V+W M+ Y + + D+FL MR G F
Sbjct: 101 VLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKF 160
Query: 167 NSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVF 226
+ T++ + ACG E ++H L + D ++ +G +++ +Y + G + +A +VF
Sbjct: 161 SEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVF 220
Query: 227 SMMSKRDAVSWNSLISGYVHNGEIEEA---YRLFERMP---------------------- 261
M + +V+W+S+++GYV N EEA YR +RM
Sbjct: 221 ESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALI 280
Query: 262 --------------GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFV 307
G + ++ + ++ G+L +S +F+ + EK+ W IISGF
Sbjct: 281 EGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFA 340
Query: 308 NNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHV-VKMNMESDV 366
+ + +E F +M + + PN++T SS+LS T + +G + + + +V
Sbjct: 341 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 400
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNI 392
+ +V + + G + +AY + +I
Sbjct: 401 VHYSCMVDILGRAGLLSEAYELIKSI 426
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 149/296 (50%), Gaps = 17/296 (5%)
Query: 11 AMITALIN--NNCSIYE-AFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPAR 67
++ LIN + C E A ++F M R+ VS+ MI + R M EA ++++ M R
Sbjct: 97 TLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEM--R 154
Query: 68 WRDSVCSNALISGYLKVG--RCE--EAARI----FEAMVEKDVVAWGSMVDGYCKKGRVI 119
S IS L C+ E ++ + ++ ++ +++D Y K G +
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
+A ++F+ M +K+ V W++MV GY++ +E+ L+ +R + N TL+ + AC
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
EG Q+H ++ + GF ++ + +S + MY + G + E+ +FS + +++ WN+
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 240 LISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITGFSSKGNLEKSIELFNMM 291
+ISG+ + +E LFE+M V+++++++ G +E+ F +M
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 122/230 (53%), Gaps = 13/230 (5%)
Query: 330 NQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIF 389
N+ + +L A + + H ++++++E DV++ N L++ YSKCG V A ++F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 390 TNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-HVGLV 448
+ ER++VS+N+MI + +N + EAL++F +M++EG ++ T SVLSAC + +
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 449 EEGFIYFKSMKTL--YNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGAL 506
E ++ S+KT N+ G ++D+ + G + +A+ + SM + W ++
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVG----TALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSM 234
Query: 507 LGAGRTHLNLDLAKLAAQ--HLMELEPDSATPYVVL---SDLYSVIGKKR 551
+ + N + A L + M LE + T V+ S+L ++I K+
Sbjct: 235 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ 284
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 275/478 (57%), Gaps = 10/478 (2%)
Query: 127 KMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACGRFFRYRE 186
+M E NV + A+ G++ +L++ M R ++ +S T + L +A R+ E
Sbjct: 85 QMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGE 144
Query: 187 GVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYVH 246
+Q H + +FGF + + + ++I Y G + EA KVF M +RD ++W +++S Y
Sbjct: 145 SLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 202
Query: 247 NGEIEEAYRLFERMPGKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGF 306
+++ A L +M K+ + +I G+ GNLE++ LFN MP KD ++WT +I G+
Sbjct: 203 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 262
Query: 307 VNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDV 366
N++Y EA F +M+ + + P+++T+S+V+SA A L G ++H + ++ DV
Sbjct: 263 SQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDV 322
Query: 367 SIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDE 426
I ++LV +YSKCG++ A +F N+ ++N+ +NS+I G A +G +EAL +F KM+ E
Sbjct: 323 YIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEME 382
Query: 427 GLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAE 486
+ PN +TF+SV +AC H GLV+EG ++SM Y+I EHY MV + +AG + E
Sbjct: 383 SVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYE 442
Query: 487 AIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVVLSDLYSV 546
A++LI +M FEP +WGALL R H NL +A++A LM LEP ++ Y +L +Y+
Sbjct: 443 ALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAE 502
Query: 547 IGKKRDGNRVRMKKKLKRIRK-SPGCSWIILKDKVHLFLAGRKS-------CLDLKEI 596
+ RD +R + + I K PG S I + + HLF A KS CL L EI
Sbjct: 503 QNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 560
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 129/252 (51%), Gaps = 6/252 (2%)
Query: 44 MITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVV 103
+I + G EA +++ MP R D + ++S Y +V + A + M EK+
Sbjct: 165 LIDFYSATGRIREARKVFDEMPER--DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEA 222
Query: 104 AWGSMVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGG 163
+++GY G + +A +F++MP K++++WT M+ GY + + + +F M G
Sbjct: 223 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 282
Query: 164 MAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEAN 223
+ + +T++ + AC G +VH + GF D+ +G++++ MY + G ++ A
Sbjct: 283 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 342
Query: 224 KVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKG 279
VF + K++ WNS+I G +G +EA ++F +M + + V++ ++ T + G
Sbjct: 343 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 402
Query: 280 NLEKSIELFNMM 291
+++ ++ M
Sbjct: 403 LVDEGRRIYRSM 414
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 201/478 (42%), Gaps = 94/478 (19%)
Query: 11 AMITALINNNCSIYEAFEIFAT--------------MPMRNAVSYAAMITGFVRRGMFYE 56
AMI +N +C + F T M N Y A+ GFV
Sbjct: 50 AMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIR 109
Query: 57 AEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWG---------S 107
+ ELYV M RDSV ++ Y + + A F ++ + +G +
Sbjct: 110 SLELYVRM---LRDSVSPSSYT--YSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTT 164
Query: 108 MVDGYCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFN 167
++D Y GR+ EAR++FD+MPE++ +AWT MV Y +V L M N
Sbjct: 165 LIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRV----------LDMDSANSLAN 214
Query: 168 SITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFS 227
++ + + N +I Y LG +++A +F+
Sbjct: 215 QMS-----------------------------EKNEATSNCLINGYMGLGNLEQAESLFN 245
Query: 228 MMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGK----DFVSWTTMITGFSSKGNLE- 282
M +D +SW ++I GY N EA +F +M + D V+ +T+I+ + G LE
Sbjct: 246 QMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEI 305
Query: 283 -KSIELFNMMPE--KDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLS 339
K + ++ + D +A++ + E A F + +K N +S++
Sbjct: 306 GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWNSIIE 361
Query: 340 ASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKC---GNVVDAYRIFTN-IDER 395
AA + ++ A KM MES + VS+++ C G V + RI+ + ID+
Sbjct: 362 GLAAHGFAQEALKMFA---KMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY 418
Query: 396 NIVS----YNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACN-HVGLV 448
+IVS Y M+ F++ GL EAL L M+ E PN + + ++L C H LV
Sbjct: 419 SIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE---PNAVIWGALLDGCRIHKNLV 473
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 139/336 (41%), Gaps = 81/336 (24%)
Query: 272 ITGFSSKGNLEKSIELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQ 331
IT +S L+ ++ M E + + A+ GFV + ++ MLR V P+
Sbjct: 67 ITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSS 126
Query: 332 LTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTN 391
T SS++ AS+ + G + AH+ K V IQ +L+ YS G + +A ++F
Sbjct: 127 YTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDE 184
Query: 392 IDERNIVSYNSMISGFAQ-----------------------------NGLG--EEALNLF 420
+ ER+ +++ +M+S + + GLG E+A +LF
Sbjct: 185 MPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLF 244
Query: 421 R-------------------------------KMKDEGLVPNQITFLSVLSACNHVGLVE 449
KM +EG++P+++T +V+SAC H+G++E
Sbjct: 245 NQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE 304
Query: 450 EG---FIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPG---VW 503
G +Y + ++ G + +VD+ + GSL A+ + F P W
Sbjct: 305 IGKEVHMYTLQNGFVLDVYIG----SALVDMYSKCGSLERALLVF----FNLPKKNLFCW 356
Query: 504 GALLGAGRTHLNLDLAKLAAQHLMELEPDSATPYVV 539
+++ H A+ A + ++E +S P V
Sbjct: 357 NSIIEGLAAH---GFAQEALKMFAKMEMESVKPNAV 389
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 22/183 (12%)
Query: 355 AHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGE 414
A ++K ++ D + N ++ + + A T + E N+ YN++ GF
Sbjct: 49 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 108
Query: 415 EALNLFRKMKDEGLVPNQITFLSVLSACNHVGLVEE---------GFIYFKSMKTLYNIE 465
+L L+ +M + + P+ T+ S++ A + E GF + ++T
Sbjct: 109 RSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQT----- 163
Query: 466 PGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQH 525
++D G + EA + + M E W ++ A R L++D A A
Sbjct: 164 -------TLIDFYSATGRIREARKVFDEMP-ERDDIAWTTMVSAYRRVLDMDSANSLANQ 215
Query: 526 LME 528
+ E
Sbjct: 216 MSE 218
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 25 EAFEIFATMPMR----NAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSN----- 75
EA ++FA M M NAV++ ++ T G+ E +Y +M + S+ SN
Sbjct: 371 EALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY--SIVSNVEHYG 428
Query: 76 ALISGYLKVGRCEEAARIFEAM-VEKDVVAWGSMVDGYCKKGRVIEAREIFDKM 128
++ + K G EA + M E + V WG+++DG ++ A F+K+
Sbjct: 429 GMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 482
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 308 bits (789), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 193/658 (29%), Positives = 323/658 (49%), Gaps = 87/658 (13%)
Query: 23 IYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPARWRDSVCSNALISG-Y 81
+ A +++ MP +N VS MI+G V+ G A +L+ MP R +V + ++ G Y
Sbjct: 64 VSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDR---TVVTWTILMGWY 120
Query: 82 LKVGRCEEAARIFEAMVEK------DVVAWGSMVDG------------------------ 111
+ +EA ++F M D V + +++ G
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 180
Query: 112 -------------YCKKGRVIEAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLS 158
YC+ R+ A +F+++PEK+ V + ++ GY K + + LFL
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLK 240
Query: 159 MRRGGMAFNSITLTILFEACGRFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGF 218
MR+ G + T + + +A + G Q+H L GF D +GN I+ Y +
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300
Query: 219 MDEANKVFSMMSKRDAVSWNSLISGYVHNGEIEEAYRLFERMPGKDF----VSWTTMITG 274
+ E +F M + D VS+N +IS Y + E + F M F + TM++
Sbjct: 301 VLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
Query: 275 FSSKGNLEKSIEL-----------------------------------FNMMPEKDDVTW 299
++ +L+ +L F +P++ V+W
Sbjct: 361 AANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSW 420
Query: 300 TAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQGSQIHAHVVK 359
TA+ISG+V + + F +M ++R +Q T ++VL ASA+ A+L G Q+HA +++
Sbjct: 421 TALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIR 480
Query: 360 MNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNSMISGFAQNGLGEEALNL 419
+V + LV +Y+KCG++ DA ++F + +RN VS+N++IS A NG GE A+
Sbjct: 481 SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGA 540
Query: 420 FRKMKDEGLVPNQITFLSVLSACNHVGLVEEGFIYFKSMKTLYNIEPGPEHYACMVDILG 479
F KM + GL P+ ++ L VL+AC+H G VE+G YF++M +Y I P +HYACM+D+LG
Sbjct: 541 FAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLG 600
Query: 480 RAGSLAEAIDLINSMTFEPPPGVWGALLGAGRTHLNLDLAKLAAQHLMELEP-DSATPYV 538
R G AEA L++ M FEP +W ++L A R H N LA+ AA+ L +E A YV
Sbjct: 601 RNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYV 660
Query: 539 VLSDLYSVIGKKRDGNRVRMKKKLKRIRKSPGCSWIILKDKVHLFLAGRKSCLDLKEI 596
+S++Y+ G+ V+ + + I+K P SW+ + K+H+F + ++ + EI
Sbjct: 661 SMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEI 718
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 246/520 (47%), Gaps = 53/520 (10%)
Query: 70 DSVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVIEAREIFDKMP 129
D+ SN ++ L+ G+ A ++++ M K+ V+ +M+ G+ K G V AR++FD MP
Sbjct: 47 DTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 130 EKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAF--NSITLTILFEACGRFFRYREG 187
++ VV WT ++ Y + F++ F LF M R + +T T L C
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV 166
Query: 188 VQVHGLVSRFGFDYD--IILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNSLISGYV 245
QVH + GFD + + + N ++ Y + +D A +F + ++D+V++N+LI+GY
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 246 HNGEIEEAYRLFERM-----PGKDF--------------------VSWTTMITGFSSKGN 280
+G E+ LF +M DF + ++ TGFS +
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 281 LEKSI--------------ELFNMMPEKDDVTWTAIISGFVNNEQYEEAFRWFIEMLRKD 326
+ I LF+ MPE D V++ +IS + +QYE + +F EM
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 327 VRPNQLTLSSVLSASAATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAY 386
+++LS +A ++L G Q+H + +S + + NSLV +Y+KC +A
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 387 RIFTNIDERNIVSYNSMISGFAQNGLGEEALNLFRKMKDEGLVPNQITFLSVLSACNHVG 446
IF ++ +R VS+ ++ISG+ Q GL L LF KM+ L +Q TF +VL A
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 447 ---LVEEGFIYFKSMKTLYNIEPGPEHYACMVDILGRAGSLAEAIDLINSMTFEPPPGVW 503
L ++ + L N+ G + +VD+ + GS+ +A+ + M + W
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSG----SGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSW 521
Query: 504 GALLGAGRTHLNLDLAKLAAQHLME--LEPDSATPYVVLS 541
AL+ A + + + A A ++E L+PDS + VL+
Sbjct: 522 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 181/428 (42%), Gaps = 28/428 (6%)
Query: 7 ASYNAMITALINNNCSIYEAFEIFATMPMRNAVSYAAMITGFVRRGMFYEAEELYVNMPA 66
AS I + + + E +F MP + VSY +I+ + + + + + M
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 67 RWRD-------SVCSNALISGYLKVGRCEEAARIFEAMVEKDVVAWGSMVDGYCKKGRVI 119
D ++ S A L++GR + + A + + S+VD Y K
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGR-QLHCQALLATADSILHVGNSLVDMYAKCEMFE 403
Query: 120 EAREIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGMAFNSITLTILFEACG 179
EA IF +P++ V+WTA++ GY++ G LF MR + + T + +A
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 463
Query: 180 RFFRYREGVQVHGLVSRFGFDYDIILGNSIITMYGRLGFMDEANKVFSMMSKRDAVSWNS 239
F G Q+H + R G ++ G+ ++ MY + G + +A +VF M R+AVSWN+
Sbjct: 464 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 523
Query: 240 LISGYVHNGEIEEAYRLFERMP----GKDFVSWTTMITGFSSKGNLEKSIELFNMMPEKD 295
LIS + NG+ E A F +M D VS ++T S G +E+ E F M
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583
Query: 296 DVT-----WTAIISGFVNNEQYEEAFRWFIEMLRKDVRPNQLTLSSVLSASAATATLNQG 350
+T + ++ N ++ EA + EM P+++ SSVL+A +
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLNACRIHKNQSLA 640
Query: 351 SQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNI--------VSYNS 402
+ + M D + S+ ++Y+ G + + ER I V N
Sbjct: 641 ERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNH 700
Query: 403 MISGFAQN 410
I F+ N
Sbjct: 701 KIHVFSSN 708
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 33/134 (24%)
Query: 343 ATATLNQGSQIHAHVVKMNMESDVSIQNSLVSLYSKCGNVVDAYRIFTNIDERNIVSYNS 402
+ AT ++ A ++K ++D N +V + G V A +++ + +N VS N+
Sbjct: 25 SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 403 MISG-------------------------------FAQNGLGEEALNLFRKM--KDEGLV 429
MISG +A+N +EA LFR+M +
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 430 PNQITFLSVLSACN 443
P+ +TF ++L CN
Sbjct: 145 PDHVTFTTLLPGCN 158
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 1 MADRTSASYNAMITALINNNCSIYEAFEIFATMP----MRNAVSYAAMIT-----GFVRR 51
M DR + S+NA+I+A +N A FA M ++VS ++T GFV +
Sbjct: 513 MPDRNAVSWNALISAHADNG-DGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQ 571
Query: 52 GM-FYEAEELYVNMPARWRDSVCSNALISGYLKVGRCEEAARIFEAM-VEKDVVAWGSMV 109
G +++A + + + C L+ + GR EA ++ + M E D + W S++
Sbjct: 572 GTEYFQAMSPIYGITPKKKHYACMLDLLG---RNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Query: 110 DGYCK--KGRVIEAR---EIFDKMPEKNVVAWTAMVDGYMKVDCFEDGFDLFLSMRRGGM 164
+ C+ K + + R ++F ++ A+ +M + Y +E D+ +MR G+
Sbjct: 629 NA-CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 239,019,537
Number of Sequences: 539616
Number of extensions: 10160174
Number of successful extensions: 35617
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 23591
Number of HSP's gapped (non-prelim): 2779
length of query: 649
length of database: 191,569,459
effective HSP length: 124
effective length of query: 525
effective length of database: 124,657,075
effective search space: 65444964375
effective search space used: 65444964375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)