BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006347
(649 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 463 VKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
V L L F EL A++NF + LG+GGFG VY GRL DG +AVKRL + QG E
Sbjct: 20 VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGE 79
Query: 523 -EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD-PLKKERLDWR 580
+F EV +IS HRNL+RL G C+ E++L+Y YM N S+ + L + P + LDW
Sbjct: 80 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 139
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
KR I G +RGL YLH +IIHRD+KA+NILLDEE + DFG+AK+
Sbjct: 140 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 463 VKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
V L L F EL A++NF + LG+GGFG VY GRL DG +AVKRL + QG E
Sbjct: 12 VHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGE 71
Query: 523 -EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD-PLKKERLDWR 580
+F EV +IS HRNL+RL G C+ E++L+Y YM N S+ + L + P + LDW
Sbjct: 72 LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 131
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
KR I G +RGL YLH +IIHRD+KA+NILLDEE + DFG+AK+
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 116/197 (58%), Gaps = 9/197 (4%)
Query: 455 LSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLS 514
LS++ + + +PL EE ATNNF +G G FG VY G L+DG ++A+KR +
Sbjct: 16 LSSSYLVPFESYRVPLVDLEE---ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT 72
Query: 515 KASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-DPLK 573
S QG+EEF E+ +S +H +LV L+G C E E +LIY+YM N +L L+ L
Sbjct: 73 PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP 132
Query: 574 KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+ W +R I G +RGL YLH + IIHRD+K+ NILLDE PKI+DFG++K
Sbjct: 133 TMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK- 188
Query: 634 GGNQDQADTGRVV-GTL 649
G DQ VV GTL
Sbjct: 189 GTELDQTHLXXVVKGTL 205
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Query: 455 LSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLS 514
LS++ + + +PL EE ATNNF +G G FG VY G L+DG ++A+KR +
Sbjct: 16 LSSSYLVPFESYRVPLVDLEE---ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT 72
Query: 515 KASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-DPLK 573
S QG+EEF E+ +S +H +LV L+G C E E +LIY+YM N +L L+ L
Sbjct: 73 PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP 132
Query: 574 KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ W +R I G +RGL YLH + IIHRD+K+ NILLDE PKI+DFG++K
Sbjct: 133 TMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK 187
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 14/188 (7%)
Query: 471 FQFEELATATNNFQL------SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE- 523
F F EL TNNF +K+G+GGFG VY G + + +AVK+L+ EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 524 ---FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
F E+ V++K QH NLV LLG +G++ L+Y YMPN SL L L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
R I +G + G+ +LH + IHRD+K++NILLDE KISDFG+A+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 641 DTGRVVGT 648
R+VGT
Sbjct: 191 MXSRIVGT 198
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 14/188 (7%)
Query: 471 FQFEELATATNNFQL------SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE- 523
F F EL TNNF +K+G+GGFG VY G + + +AVK+L+ EE
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 524 ---FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
F E+ V++K QH NLV LLG +G++ L+Y YMPN SL L L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
R I +G + G+ +LH + IHRD+K++NILLDE KISDFG+A+
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 641 DTGRVVGT 648
R+VGT
Sbjct: 185 MXXRIVGT 192
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 14/188 (7%)
Query: 471 FQFEELATATNNFQL------SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE- 523
F F EL TNNF +K+G+GGFG VY G + + +AVK+L+ EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 524 ---FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
F E+ V++K QH NLV LLG +G++ L+Y YMPN SL L L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
R I +G + G+ +LH + IHRD+K++NILLDE KISDFG+A+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 641 DTGRVVGT 648
R+VGT
Sbjct: 191 MXXRIVGT 198
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 471 FQFEELATATNNFQL------SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE- 523
F F EL TNNF +K G+GGFG VY G + + +AVK+L+ EE
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 524 ---FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
F E+ V +K QH NLV LLG +G++ L+Y Y PN SL L L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
R I +G + G+ +LH + IHRD+K++NILLDE KISDFG+A+
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 641 DTGRVVGT 648
R+VGT
Sbjct: 182 XXSRIVGT 189
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNL 539
+ + K+G G FG V+ G ++AVK L + + + EF+ EV ++ +L+H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V +G + ++ EY+ SL LL +E+LD R+R ++ +++G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
I+HRDLK+ N+L+D++ K+ DFG++++
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNL 539
+ + K+G G FG V+ G ++AVK L + + + EF+ EV ++ +L+H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V +G + ++ EY+ SL LL +E+LD R+R ++ +++G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
I+HR+LK+ N+L+D++ K+ DFG++++
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 37 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 91
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 149
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 150 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 6 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 118
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 119 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 6 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 118
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 119 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 5 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 59
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 117
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 118 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 168
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 4 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 58
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 116
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 117 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 167
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 11 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 65
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 123
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 124 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 174
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 13 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 67
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 125
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 126 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 176
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 12 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 66
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 124
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 125 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 175
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 10 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 64
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 122
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 123 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 173
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 9 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 121
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 122 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 6 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 118
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 119 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 7/164 (4%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L +LG G FG V+ G + ++AVK L K ++ F+ E ++ LQH LV
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 71
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
RL E +I EYM SL D L D K L K + I+ G+ Y+ R
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERK 129
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL+A+N+L+ E L KI+DFG+A++ N+ A G
Sbjct: 130 N---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 170
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEF 524
+ QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 22 MTQFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 76
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKR 582
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 77 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 134
Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 135 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEF 524
+ QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 22 MTQFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 76
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKR 582
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 77 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 134
Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 135 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLG G FG V+ G + ++AVK L K ++ F+ E ++ LQH LV
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 70
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE---RLDWRKRFNIIEGISRGLLYLH 597
RL + E +I E+M SL D LK + ++ K + I+ G+ Y+
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSL----LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 126
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
R + IHRDL+A+N+L+ E L KI+DFG+A++ N+ A G
Sbjct: 127 RKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 169
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 9 QFEE-----RHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI E++P SL L KER+D K
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQ 121
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 122 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 9 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L ER+D K
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQ 121
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHRDL NIL++ E KI DFG+ K+ +++
Sbjct: 122 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 65
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 66 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 123
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 124 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 170
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 64
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 65 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 122
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 66
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 67 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 124
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 125 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 171
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 64
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 65 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 122
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 73
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 74 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 131
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 132 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 178
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
QFEE + + +LG+G FG V R L+D G+ +AVK+L ++ + L +F
Sbjct: 7 QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 61
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
E+ ++ LQH N+V+ G C + LI EY+P SL L KER+D K
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 119
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL R IHR+L NIL++ E KI DFG+ K+ +++
Sbjct: 120 YTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE 170
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 72
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 73 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 130
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 131 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 177
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 64
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 65 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 122
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 70
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 71 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 128
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 129 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 175
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 19/167 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLSKASGQGLEEFMNEVMVISKL 534
+N L +LG+G FG V+ +D +AVK L AS ++F E +++ L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLD----------ALLFDPLKKERLDWRKRFN 584
QH ++V+ G CVEG+ ++++EYM + L+ L+ + L + +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
I + I+ G++YL + +HRDL N L+ E L KI DFGM++
Sbjct: 133 IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 70
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 71 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 128
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 129 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 175
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 69
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 70 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 127
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 128 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 174
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 59
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 60 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 117
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 118 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 164
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
+E +L +LG G FG V+ G ++AVK L + S + F+ E ++ +
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 74
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQH+ LVRL + E +I EYM N SL L P +L K ++ I+ G+
Sbjct: 75 LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 132
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++ + IHRDL+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 133 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 179
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ EYM N SLD+ L + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG+A++ + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
+L E E ++ EYM SL D LK E + + +++ I+ G+ Y+
Sbjct: 67 QLYAVVSE-EPIXIVTEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
R + +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 122 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG 164
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
+L E E ++ EYM SL D LK E + + +++ I+ G+ Y+
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
R + +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
+L E E ++ EYM SL D LK E + + +++ I+ G+ Y+
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
R + +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+L E E ++ EYM SL L + K L + ++ I+ G+ Y+ R
Sbjct: 77 QLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 133 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG 174
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 19/188 (10%)
Query: 471 FQFEELATATNNF---------QLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA- 516
F FE+ A F ++ +G G FG V GRLK G+ +A+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 517 SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER 576
+ + +F++E ++ + H N++ L G + + M+I EYM N SLDA L R
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGR 127
Query: 577 LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
+ ++ GI G+ YL S + +HRDL A NIL++ L K+SDFGM+++ +
Sbjct: 128 FTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 637 QDQADTGR 644
+ A T R
Sbjct: 185 PEAAYTTR 192
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV+
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQ 326
Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLHR 598
L E E ++ EYM SL D LK E + + +++ I+ G+ Y+ R
Sbjct: 327 LYAVVSE-EPIYIVTEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 382 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+L E E ++ EYM SL L + K L + ++ I+ G+ Y+ R
Sbjct: 66 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 121
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 122 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 163
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
+L E E ++ EYM SL D LK E + + +++ I+ G+ Y+
Sbjct: 70 QLYAVVSE-EPIYIVTEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
R + +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 125 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 167
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKL 534
+ + +G G G V +GRL+ GQ +A+K L + + +F++E ++ +
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
H N++RL G G M++ EYM N SLD L + + ++ G+ G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQFTIMQLVGMLRGVGAGMR 165
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
YL S L +HRDL A N+L+D L K+SDFG++++ + D A T
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ EYM N SLD+ L + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+L E E ++ EYM SL L + K L + ++ I+ G+ Y+ R
Sbjct: 68 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 123
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 124 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 165
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ EYM N SLD+ L + +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 122
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 123 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+L E E ++ EYM SL L + K L + ++ I+ G+ Y+ R
Sbjct: 77 QLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 133 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+L E E ++ EYM SL L + K L + ++ I+ G+ Y+ R
Sbjct: 77 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 133 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 23 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ EYM N SLD+ L + +
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 139
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 140 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
+L E E ++ EYM SL D LK E + + +++ I+ G+ Y+
Sbjct: 243 QLYAVVSE-EPIYIVGEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
R + +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ EYM N SLD+ L + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ EYM N SLD+ L + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ EYM N SLD+ L + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+L E E ++ EYM SL L + K L + ++ I+ G+ Y+ R
Sbjct: 77 QLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 133 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 33 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ EYM N SLD+ L + +
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 149
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 150 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ EYM N SLD+ L + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKL 534
+ + +G G G V +GRL+ GQ +A+K L + + +F++E ++ +
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
H N++RL G G M++ EYM N SLD L + + ++ G+ G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQFTIMQLVGMLRGVGAGMR 165
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
YL S L +HRDL A N+L+D L K+SDFG++++ + D A T
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
+L E E ++ EYM SL D LK E + + +++ I+ G+ Y+
Sbjct: 74 QLYAVVSE-EPIYIVTEYMNKGSL----LDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
R + +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 129 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 171
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
+L +LG G FG V+ G ++AVK L + S + F+ E ++ +LQH+ LVR
Sbjct: 10 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR 68
Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
L + E +I EYM N SL L P +L K ++ I+ G+ ++ +
Sbjct: 69 LYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN- 125
Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
IHR+L+A+NIL+ + L+ KI+DFG+A++ N+ A G
Sbjct: 126 --YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 165
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV+
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQ 244
Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
L E E ++ EYM SL L + K L + ++ I+ G+ Y+ R
Sbjct: 245 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER--- 299
Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ +HRDL+A+NIL+ E L K++DFG+ ++ N+ A G
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQG 341
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+L E E ++ EYM SL L + K L + ++ I+ G+ Y+ R
Sbjct: 77 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ +HRDL A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 133 -MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ EYM N SLD+ L + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG+ ++ + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ K++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+L E E ++ EYM SL L + K L + ++ I+ G+ Y+ R
Sbjct: 77 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 133 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
+L E E ++ EYM L D LK E + + +++ I+ G+ Y+
Sbjct: 77 QLYAVVSE-EPIYIVMEYMSK----GCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
R + +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
+L E E ++ EYM L D LK E + + +++ I+ G+ Y+
Sbjct: 77 QLYAVVSE-EPIYIVTEYMSK----GCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
R + +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLGQG FG V+ G +A+K L K E F+ E V+ KL+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
+L E E ++ EYM SL D LK E + + +++ I+ G+ Y+
Sbjct: 74 QLYAVVSE-EPIYIVTEYMNKGSL----LDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
R + +HRDL+A+NIL+ E L K++DFG+A++ N+ A G
Sbjct: 129 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQG 171
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 483 FQLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHR 537
++ +G G FG V GRLK G+ +A+K L + + +F++E ++ + H
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N++ L G + + M+I EYM N SLDA L R + ++ GI G+ YL
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLRGIGSGMKYL- 132
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
S + +HRDL A NIL++ L K+SDFGM+++ + + A T R
Sbjct: 133 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 483 FQLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHR 537
++ +G G FG V GRLK G+ +A+K L + + +F++E ++ + H
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N++ L G + + M+I EYM N SLDA L R + ++ GI G+ YL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLRGIGSGMKYL- 126
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
S + +HRDL A NIL++ L K+SDFGM+++ + + A T R
Sbjct: 127 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 96/165 (58%), Gaps = 14/165 (8%)
Query: 489 LGQGGFGPVYWGR-LKDGQ----EIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRL 542
LG G FG VY G + +G+ +A+K L++ +G EFM+E ++++ + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
LG C+ + L+ + MP+ L + + K+ + + N I++G++YL
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER--- 159
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
R++HRDL A N+L+ + KI+DFG+A++ G++ + AD G++
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 204
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 96/165 (58%), Gaps = 14/165 (8%)
Query: 489 LGQGGFGPVYWGR-LKDGQ----EIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRL 542
LG G FG VY G + +G+ +A+K L++ +G EFM+E ++++ + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
LG C+ + L+ + MP+ L + + K+ + + N I++G++YL
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER--- 136
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
R++HRDL A N+L+ + KI+DFG+A++ G++ + AD G++
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 181
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 6 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ E M N SLD+ L + +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK--HDAQFTVIQLVG 122
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 123 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 90
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C ++ EYMP +L L + +E + + IS + YL +
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNLLDYLRE-CNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 150 N---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAG 190
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ E M N SLD+ L + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
+ +F + ATN + +G G FG V GRLK +EI+V + G + +F
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
+ E ++ + H N++RL G + + M++ E M N SLD+ L + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++ GI+ G+ YL S + +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+L +LG G G V+ G ++AVK L + S + F+ E ++ +LQH+ LV
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
RL + E +I EYM N SL L P +L K ++ I+ G+ ++ +
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
IHRDL+A+NIL+ + L+ KI+DFG+A++ + A G
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREG 169
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 489 LGQGGFGPVYWGRLKDGQ-----EIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRL 542
+G G FG VY G LK +A+K L + +F+ E ++ + H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
G + + M+I EYM N +LD L + K + ++ GI+ G+ YL + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+HRDL A NIL++ L K+SDFG++++
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 14/163 (8%)
Query: 489 LGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLL 543
+G G FG V GRLK G+ +A+K L + + +F+ E ++ + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE--RLDWRKRFNIIEGISRGLLYLHRDSR 601
G + + M++ EYM N SLD L KK + + ++ GIS G+ YL S
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFL----KKNDGQFTVIQLVGMLRGISAGMKYL---SD 142
Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
+ +HRDL A NIL++ L K+SDFG++++ + + A T R
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 488 KLGQGGFGPVYWGRL------KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
+LG+G FG V+ +D +AVK L +AS ++F E +++ LQH+++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 542 LLGCCVEGEEKMLIYEYMPNRSL---------DALLF---DPLKKERLDWRKRFNIIEGI 589
G C EG ++++EYM + L DA L + + L + + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ G++YL + L +HRDL N L+ + L KI DFGM++
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHRNLVRLL 543
++G G FG VY+ R +++ + +A+K++S K S + ++ + EV + KL+H N ++
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
GC + L+ EY + D L + K+ L + + G +GL YLH +
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 174
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+IHRD+KA NILL E K+ DFG A I
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHRNLVRLL 543
++G G FG VY+ R +++ + +A+K++S K S + ++ + EV + KL+H N ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
GC + L+ EY + D L + K+ L + + G +GL YLH +
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 135
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+IHRD+KA NILL E K+ DFG A I
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 84/164 (51%), Gaps = 8/164 (4%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLG G FG V+ ++AVK + K +E F+ E V+ LQH LV
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 73
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
+L V E +I E+M SL D L D K+ L K + I+ G+ ++ +
Sbjct: 74 KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL+A+NIL+ L KI+DFG+A++ N+ A G
Sbjct: 131 N---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 171
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQ 535
N+Q+ LG+G FG V GQ++A+K L+K+ QG E E+ + L+
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
H ++++L +E +++ EY N D ++ +++++ ++ + I + Y
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 128
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
HR +I+HRDLK N+LLDE LN KI+DFG++ I
Sbjct: 129 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 163
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQ 535
N+Q+ LG+G FG V GQ++A+K L+K+ QG E E+ + L+
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
H ++++L +E +++ EY N D ++ +++++ ++ + I + Y
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 127
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
HR +I+HRDLK N+LLDE LN KI+DFG++ I
Sbjct: 128 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 488 KLGQGGFGPVYWGRL------KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
+LG+G FG V+ +D +AVK L +AS ++F E +++ LQH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 542 LLGCCVEGEEKMLIYEYMPNRSL---------DALLF---DPLKKERLDWRKRFNIIEGI 589
G C EG ++++EYM + L DA L + + L + + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ G++YL + L +HRDL N L+ + L KI DFGM++
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 488 KLGQGGFGPVYWGRL------KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
+LG+G FG V+ +D +AVK L +AS ++F E +++ LQH+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 542 LLGCCVEGEEKMLIYEYMPNRSL---------DALLF---DPLKKERLDWRKRFNIIEGI 589
G C EG ++++EYM + L DA L + + L + + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ G++YL + L +HRDL N L+ + L KI DFGM++
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 11/172 (6%)
Query: 484 QLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHRN 538
++ +G G FG V GRLK G++ +A+K L + + EF++E ++ + +H N
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
++RL G M++ E+M N +LD+ L L + + ++ GI+ G+ YL
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIASGMRYL-- 134
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN-QDQADTGRVVGTL 649
+ + +HRDL A NIL++ L K+SDFG+++ N D +T + G +
Sbjct: 135 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQ 535
N+Q+ LG+G FG V GQ++A+K L+K+ QG E E+ + L+
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
H ++++L +E +++ EY N D ++ +++++ ++ + I + Y
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 122
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
HR +I+HRDLK N+LLDE LN KI+DFG++ I
Sbjct: 123 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 157
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQ 535
N+Q+ LG+G FG V GQ++A+K L+K+ QG E E+ + L+
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
H ++++L +E +++ EY N D ++ +++++ ++ + I + Y
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 118
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
HR +I+HRDLK N+LLDE LN KI+DFG++ I
Sbjct: 119 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 153
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 6/162 (3%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
+ QL +LG G FG V+ G ++A+K L K E F+ E ++ KL+H LV+
Sbjct: 10 SLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
L E E ++ EYM SL L D + L ++ ++ G+ Y+ R
Sbjct: 69 LYAVVSE-EPIYIVTEYMNKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIER--- 123
Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL+++NIL+ L KI+DFG+A++ N+ A G
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQG 165
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 84/164 (51%), Gaps = 8/164 (4%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLG G FG V+ ++AVK + K +E F+ E V+ LQH LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
+L V E +I E+M SL D L D K+ L K + I+ G+ ++ +
Sbjct: 247 KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR 303
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL+A+NIL+ L KI+DFG+A++ N+ A G
Sbjct: 304 N---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
++G G FG V+ G + ++A+K + + E+F+ E V+ KL H LV+L G C+
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
E L++E+M + L D L+ +R + + G+ YL S +I
Sbjct: 73 EQAPICLVFEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VI 125
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
HRDL A N L+ E K+SDFGM + +Q + TG
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 489 LGQGGFGPVYWGRL-----KDGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
LG+G FG V R G+++AVK L SG + + E+ ++ L H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 543 LGCCVE--GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
G C E G LI E++P+ SL L P K +++ +++ I +G+ YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--GS 144
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R + +HRDL A N+L++ E KI DFG+ K
Sbjct: 145 R-QYVHRDLAARNVLVESEHQVKIGDFGLTK 174
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query: 484 QLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHRN 538
++ +G G FG V GRLK G++ +A+K L + + EF++E ++ + +H N
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
++RL G M++ E+M N +LD+ L L + + ++ GI+ G+ YL
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIASGMRYL-- 132
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
+ + +HRDL A NIL++ L K+SDFG+++ N
Sbjct: 133 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN 169
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 489 LGQGGFGPVYWGRL-----KDGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
LG+G FG V R G+++AVK L SG + + E+ ++ L H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 543 LGCCVE--GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
G C E G LI E++P+ SL L P K +++ +++ I +G+ YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--GS 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R + +HRDL A N+L++ E KI DFG+ K
Sbjct: 133 R-QYVHRDLAARNVLVESEHQVKIGDFGLTK 162
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 18/166 (10%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQG-------LEEFMNEVMV 530
A N + ++G+GGFG V+ GRL KD +A+K L +G +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+S L H N+V+L G ++ E++P L L D K + W + ++ I+
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD--EELNP---KISDFGMAK 631
G+ Y+ ++ I+HRDL++ NI L +E P K++DFG+++
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G FG VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ + + IS + YL +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 176
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 469 PLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNE 527
P +++ + + KLG G +G VY G K +AVK L K +EEF+ E
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKE 60
Query: 528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
V+ +++H NLV+LLG C +I E+M +L L + ++ ++ +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVNAVVLLYMAT 119
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
IS + YL + + IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 120 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 172
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 77 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 75
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 135 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 175
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ + + IS + YL +
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 16 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L + + + +K +I +RG+ YLH S I
Sbjct: 76 YSTK-PQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
IHRDLK++NI L E+ KI DFG+A +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATV 157
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L + + + + K +I ++G+ YLH S I
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
IHRDLK++NI L E+L KI DFG+A +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L + + + + K +I ++G+ YLH S I
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
IHRDLK++NI L E+L KI DFG+A +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 18/166 (10%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQG-------LEEFMNEVMV 530
A N + ++G+GGFG V+ GRL KD +A+K L +G +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+S L H N+V+L G ++ E++P L L D K + W + ++ I+
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD--EELNP---KISDFGMAK 631
G+ Y+ ++ I+HRDL++ NI L +E P K++DFG ++
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ ++ ++ SL L + + + + K +I ++G+ YLH S I
Sbjct: 72 YST-APQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
IHRDLK++NI L E+L KI DFG+A +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 73
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
++G G FG V+ G + ++A+K + + E+F+ E V+ KL H LV+L G C+
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
E L++E+M + L D L+ +R + + G+ YL +I
Sbjct: 73 EQAPICLVFEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
HRDL A N L+ E K+SDFGM + +Q + TG
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
++G G FG V+ G + ++A+K + + E+F+ E V+ KL H LV+L G C+
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
E L++E+M + L D L+ +R + + G+ YL +I
Sbjct: 71 EQAPICLVFEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
HRDL A N L+ E K+SDFGM + +Q + TG
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L + + + + K +I ++G+ YLH S I
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
IHRDLK++NI L E+L KI DFG+A +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 72
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 132 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 172
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 73
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
++G G FG V+ G + ++A+K + + E+F+ E V+ KL H LV+L G C+
Sbjct: 17 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
E L++E+M + L D L+ +R + + G+ YL +I
Sbjct: 76 EQAPICLVFEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
HRDL A N L+ E K+SDFGM + +Q + TG
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 84
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 85 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 144 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 184
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 14 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L + + + + K +I ++G+ YLH S I
Sbjct: 74 YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
IHRDLK++NI L E+L KI DFG+A +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATV 155
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 73
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ ++ + IS + YL +
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 173
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 10/166 (6%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
LS+++G G FG VY G+ + + ++ + + + F NEV V+ K +H N++ +G
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L +++ + + +I ++G+ YLH + I
Sbjct: 100 YMTK-DNLAIVTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGMDYLHAKN---I 153
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI----FGGNQDQADTGRVV 646
IHRD+K++NI L E L KI DFG+A + G Q + TG V+
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ + + IS + YL +
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ + + IS + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ + + IS + YL +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ + + IS + YL +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ + + IS + YL +
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ ++ ++ SL L + + + +K +I +RG+ YLH S I
Sbjct: 88 YST-APQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK++NI L E+ KI DFG+A
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
++G G FG V+ G + ++A+K + + S ++F+ E V+ KL H LV+L G C+
Sbjct: 34 EIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
E L++E+M + L D L+ +R + + G+ YL +I
Sbjct: 93 EQAPICLVFEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
HRDL A N L+ E K+SDFGM + +Q + TG
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 183
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 39 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L + + + + K +I ++G+ YLH S I
Sbjct: 99 YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
IHRDLK++NI L E+L KI DFG+A +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATV 180
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L + + + +K +I +RG+ YLH S I
Sbjct: 88 YSTK-PQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK++NI L E+ KI DFG+A
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L + + + + K +I ++G+ YLH S I
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
IHRDLK++NI L E+L KI DFG+A +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATV 181
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L + + + + K +I ++G+ YLH S I
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK++NI L E+L KI DFG+A
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 485 LSSKLGQGGFGPVYWGR------LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
L +LG+G FG V+ KD +AVK L + ++F E +++ LQH +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSL---------DALLF---DPLK-KERLDWRKRFNI 585
+V+ G C +G+ ++++EYM + L DA++ P + K L + +I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
I+ G++YL + +HRDL N L+ L KI DFGM++
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V+LLG C +I E+M +L L + ++ + + IS + YL +
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+ IHRDL A N L+ E K++DFG++++ G+ A G
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAG 169
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
+LG G FG V +G+ + ++A+K + + S +EF+ E V+ L H LV+L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
+ +I EYM N L L + + R ++ + + + + YL + +HR
Sbjct: 90 KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
DL A N L++++ K+SDFG+++ +++ + G
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVG 180
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ +L KLG G FG V+ ++AVK + K +E F+ E V+ LQH LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 240
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
+L V E +I E+M SL D L D K+ L K + I+ G+ ++ +
Sbjct: 241 KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR 297
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
+ IHRDL+A+NIL+ L KI+DFG+A++
Sbjct: 298 N---YIHRDLRAANILVSASLVCKIADFGLARV 327
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 14/179 (7%)
Query: 459 NVNTVKLQDLPLFQFEEL------ATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVK 511
++ TV+L++ P Q ++L F + KLG+G +G VY K+ GQ +A+K
Sbjct: 1 SLETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK 60
Query: 512 RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP 571
++ S L+E + E+ ++ + ++V+ G + + ++ EY S+ ++
Sbjct: 61 QVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR-- 116
Query: 572 LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
L+ + L + I++ +GL YLH +R IHRD+KA NILL+ E + K++DFG+A
Sbjct: 117 LRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLS-KASGQGLEEF 524
+ +E++ + F +LG+ FG VY G L + Q +A+K L KA G EEF
Sbjct: 2 KLKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-------------DP 571
+E M+ ++LQH N+V LLG + + +I+ Y + L L D
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 572 LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM 629
K L+ +++ I+ G+ YL S ++H+DL N+L+ ++LN KISD G+
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 18/166 (10%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQG-------LEEFMNEVMV 530
A N + ++G+GGFG V+ GRL KD +A+K L +G +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+S L H N+V+L G ++ E++P L L D K + W + ++ I+
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD--EELNP---KISDFGMAK 631
G+ Y+ ++ I+HRDL++ NI L +E P K++DF +++
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLS-KASGQGLEEF 524
+ +E++ + F +LG+ FG VY G L + Q +A+K L KA G EEF
Sbjct: 19 KLKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 76
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-------------DP 571
+E M+ ++LQH N+V LLG + + +I+ Y + L L D
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 572 LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM 629
K L+ +++ I+ G+ YL S ++H+DL N+L+ ++LN KISD G+
Sbjct: 137 TVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 32 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L + + + + K +I ++G+ YLH S I
Sbjct: 92 YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK++NI L E+L KI DFG+A
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
N++L +G+G F V R + G+E+A+K + K + L++ EV ++ L H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+V+L + LI EY D L+ KE+ + R +F I + Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-EARSKFR---QIVSAVQYCH 131
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF--GGNQD 638
+ RI+HRDLKA N+LLD ++N KI+DFG + F GG D
Sbjct: 132 QK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 171
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
+ ++G G FG VY G+ + + ++ + Q L+ F NEV V+ K +H N++ +G
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ ++ SL L + + + + K +I ++G+ YLH S I
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK++NI L E+L KI DFG+A
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
N++L +G+G F V R + G+E+A+K + K + L++ EV ++ L H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+V+L + LI EY D L+ KE+ + R +F I + Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-EARSKFR---QIVSAVQYCH 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF--GGNQD 638
+ RI+HRDLKA N+LLD ++N KI+DFG + F GG D
Sbjct: 129 QK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 168
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 20/189 (10%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQ--EIAVK--RLSKASGQGLEEFM 525
+ E++ N L LG+G FG V G LK DG ++AVK +L +S + +EEF+
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEK-----MLIYEYMPNRSLDA-LLFDPLKK--ERL 577
+E + H N++RLLG C+E + M+I +M L LL+ L+ + +
Sbjct: 85 SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI 144
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA-KIFGGN 636
+ + I+ G+ YL S +HRDL A N +L +++ ++DFG++ KI+ G
Sbjct: 145 PLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG- 200
Query: 637 QDQADTGRV 645
D GR+
Sbjct: 201 -DYYRQGRI 208
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
++G G FG V+ G + ++A+K + + E+F+ E V+ KL H LV+L G C+
Sbjct: 15 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
E L+ E+M + L D L+ +R + + G+ YL +I
Sbjct: 74 EQAPICLVTEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
HRDL A N L+ E K+SDFGM + +Q + TG
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 24/168 (14%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
++F+ + LGQG FG V R D + A+K++ + + + L ++EVM+++ L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQY 63
Query: 539 LVRLLGC------------CVEGEEKMLI-YEYMPNRSL-DALLFDPLKKERLD-WRKRF 583
+VR V+ + + I EY NR+L D + + L ++R + WR
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
I+E +S Y+H IIHRDLK NI +DE N KI DFG+AK
Sbjct: 124 QILEALS----YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 19/177 (10%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE- 522
+F +E A +S +LGQG FG VY G +KD E +A+K +++A+
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD---- 578
EF+NE V+ + ++VRLLG +G+ ++I E M L + L L+ E +
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVL 123
Query: 579 ----WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
K + I+ G+ YL+ + + +HRDL A N ++ E+ KI DFGM +
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 471 FQFEELATATNNF---------QLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRL-SKA 516
F FE+ A F ++ +G G FG V G LK G+ +A+K L S
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 517 SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER 576
+ + +F++E ++ + H N++ L G + M+I E+M N SLD+ L +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQ 131
Query: 577 LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+ ++ GI+ G+ YL + + +HRDL A NIL++ L K+SDFG+++
Sbjct: 132 FTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 185
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 483 FQLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHR 537
++ +G G FG V GRLK G+ +A+K L + + +F+ E ++ + H
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHP 104
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V L G G+ M++ E+M N +LDA L + + ++ GI+ G+ YL
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRK--HDGQFTVIQLVGMLRGIAAGMRYL- 161
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+ + +HRDL A NIL++ L K+SDFG++++
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI 195
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NLV
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 279
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+LLG C +I E+M +L L + ++ + + IS + YL + +
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKN 338
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
IHR+L A N L+ E K++DFG++++ G+ A G
Sbjct: 339 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NLV
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 276
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+LLG C +I E+M +L L + ++ ++ + IS + YL + +
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKN 335
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
IHR+L A N L+ E K++DFG++++ G+ A G
Sbjct: 336 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 375
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 488 KLGQGGFGPVYWG--RLKDGQ-EIAVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+LG G FG V G R++ Q ++A+K L + + + EE M E ++ +L + +VRL+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
G C + E ML+ E L L K+E + ++ +S G+ YL +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN--- 130
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
+HRDL A N+LL KISDFG++K G + D T R G
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAG 173
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ + KLG G +G VY G K +AVK L K +EEF+ E V+ +++H NLV
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 318
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+LLG C +I E+M +L L + ++ ++ + IS + YL + +
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKN 377
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
IHR+L A N L+ E K++DFG++++ G+ A G
Sbjct: 378 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 417
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 29/173 (16%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DG--QEIAVKRLSK-ASGQGLEEFMNEVMVISKL-Q 535
N+ + +G+G FG V R+K DG + A+KR+ + AS +F E+ V+ KL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER-----------------LD 578
H N++ LLG C L EY P+ +L D L+K R L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNL----LDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
++ + ++RG+ YL S+ + IHRDL A NIL+ E KI+DFG+++
Sbjct: 131 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 29/173 (16%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DG--QEIAVKRLSK-ASGQGLEEFMNEVMVISKL-Q 535
N+ + +G+G FG V R+K DG + A+KR+ + AS +F E+ V+ KL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER-----------------LD 578
H N++ LLG C L EY P+ +L D L+K R L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNL----LDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
++ + ++RG+ YL S+ + IHRDL A NIL+ E KI+DFG+++
Sbjct: 141 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 170
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 152
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 157
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
+LG G FG V +G+ + ++A+K + + S +EF+ E V+ L H LV+L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
+ +I EYM N L L + + R ++ + + + + YL + +HR
Sbjct: 90 KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
DL A N L++++ K+SDFG+++ ++ + G
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
+LG G FG V +G+ + ++A+K + + S +EF+ E V+ L H LV+L G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
+ +I EYM N L L + + R ++ + + + + YL + +HR
Sbjct: 70 KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 124
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
DL A N L++++ K+SDFG+++ ++ + G
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
G C+ E +++ YM + L + + + F + +++G+ YL +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 151
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +HRDL A N +LDE+ K++DFG+A+
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
+LG G FG V +G+ + ++A+K + + S +EF+ E V+ L H LV+L G C
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
+ +I EYM N L L + + R ++ + + + + YL + +HR
Sbjct: 74 KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 128
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
DL A N L++++ K+SDFG+++ ++ + G
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 164
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 458 TNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVK 511
+VN ++ +E A +S +LGQG FG VY G +KD E +A+K
Sbjct: 2 ASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 512 RLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN-------RS 563
+++A+ EF+NE V+ + ++VRLLG +G+ ++I E M RS
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 564 LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPK 623
L + + K + I+ G+ YL+ + + +HRDL A N ++ E+ K
Sbjct: 122 LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 178
Query: 624 ISDFGMAK 631
I DFGM +
Sbjct: 179 IGDFGMTR 186
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
+LG G FG V +G+ + ++A+K + + S +EF+ E V+ L H LV+L G C
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
+ +I EYM N L L + + R ++ + + + + YL + +HR
Sbjct: 81 KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 135
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
DL A N L++++ K+SDFG+++ ++ + G
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 171
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
+E A +S +LGQG FG VY G +KD E +A+K +++A+ EF+N
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
E V+ + ++VRLLG +G+ ++I E M L + L L+ E +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 130
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
K + I+ G+ YL+ + + +HRDL A N ++ E+ KI DFGM +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
+E A +S +LGQG FG VY G +KD E +A+K +++A+ EF+N
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
E V+ + ++VRLLG +G+ ++I E M L + L L+ E +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 130
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
K + I+ G+ YL+ + + +HRDL A N ++ E+ KI DFGM +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
G C+ E +++ YM + L + + + F + +++G+ YL +
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 170
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +HRDL A N +LDE+ K++DFG+A+
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
+LG G FG V +G+ + ++A+K + + S +EF+ E V+ L H LV+L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
+ +I EYM N L L + + R ++ + + + + YL + +HR
Sbjct: 75 KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
DL A N L++++ K+SDFG+++ ++ + G
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 165
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
G C+ E +++ YM + L + + + F + +++G+ YL +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 151
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +HRDL A N +LDE+ K++DFG+A+
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
G C+ E +++ YM + L + + + F + +++G+ YL +
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 171
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +HRDL A N +LDE+ K++DFG+A+
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
G C+ E +++ YM + L + + + F + +++G+ YL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 152
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +HRDL A N +LDE+ K++DFG+A+
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
G C+ E +++ YM + L + + + F + +++G+ YL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 152
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +HRDL A N +LDE+ K++DFG+A+
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
+E A +S +LGQG FG VY G +KD E +A+K +++A+ EF+N
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
E V+ + ++VRLLG +G+ ++I E M L + L L+ E +
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPS 129
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
K + I+ G+ YL+ + + +HRDL A N ++ E+ KI DFGM +
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRN 538
+ L ++G+G FG V+ GRL+ D +AVK + L+ +F+ E ++ + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+VRL+G C + + ++ E + + D L F + RL + ++ + G+ YL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
IHRDL A N L+ E+ KISDFGM++
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 17/172 (9%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
+E A +S +LGQG FG VY G +KD E +A+K +++A+ EF+N
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN-------RSLDALLFDPLKKERLDW 579
E V+ + ++VRLLG +G+ ++I E M RSL + +
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
K + I+ G+ YL+ + + +HRDL A N ++ E+ KI DFGM +
Sbjct: 128 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
G C+ E +++ YM + L + + + F + +++G+ YL +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 144
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +HRDL A N +LDE+ K++DFG+A+
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 458 TNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVK 511
+VN ++ +E A +S +LGQG FG VY G +KD E +A+K
Sbjct: 2 ASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 512 RLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD 570
+++A+ EF+NE V+ + ++VRLLG +G+ ++I E M L + L
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 571 PLKKERLD--------WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP 622
L+ E + K + I+ G+ YL+ + + +HRDL A N ++ E+
Sbjct: 122 -LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 177
Query: 623 KISDFGMAK 631
KI DFGM +
Sbjct: 178 KIGDFGMTR 186
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 458 TNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVK 511
+VN ++ +E A +S +LGQG FG VY G +KD E +A+K
Sbjct: 24 ASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 83
Query: 512 RLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD 570
+++A+ EF+NE V+ + ++VRLLG +G+ ++I E M L + L
Sbjct: 84 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-R 142
Query: 571 PLKKERLD--------WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP 622
L+ E + K + I+ G+ YL+ + + +HRDL A N ++ E+
Sbjct: 143 SLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 199
Query: 623 KISDFGMAK 631
KI DFGM +
Sbjct: 200 KIGDFGMTR 208
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRN 538
+ L ++G+G FG V+ GRL+ D +AVK + L+ +F+ E ++ + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+VRL+G C + + ++ E + + D L F + RL + ++ + G+ YL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
IHRDL A N L+ E+ KISDFGM++
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
+E A +S +LGQG FG VY G +KD E +A+K +++A+ EF+N
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
E V+ + ++VRLLG +G+ ++I E M L + L L+ E +
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 129
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
K + I+ G+ YL+ + + +HRDL A N ++ E+ KI DFGM +
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
G C+ E +++ YM + L + + + F + +++G+ YL +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 150
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +HRDL A N +LDE+ K++DFG+A+
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
G C+ E +++ YM + L + + + F + +++G+ YL +
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 149
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +HRDL A N +LDE+ K++DFG+A+
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
+E A +S +LGQG FG VY G +KD E +A+K +++A+ EF+N
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
E V+ + ++VRLLG +G+ ++I E M L + L L+ E +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 123
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
K + I+ G+ YL+ + + +HRDL A N ++ E+ KI DFGM +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
G C+ E +++ YM + L + + + F + +++G+ YL +
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 147
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +HRDL A N +LDE+ K++DFG+A+
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK-ERLDWRKRFNIIEGISRGL 593
+H N++RL G + LI EY P ++ L+K + D ++ I ++ L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPR----GEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
+LG G FG V +G+ + ++A+K + + S +EF+ E V+ L H LV+L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
+ +I EYM N L L + + R ++ + + + + YL + +HR
Sbjct: 75 KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
DL A N L++++ K+SDFG+++ ++ + G
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRG 165
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
+E A +S +LGQG FG VY G +KD E +A+K +++A+ EF+N
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
E V+ + ++VRLLG +G+ ++I E M L + L L+ E +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPS 121
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
K + I+ G+ YL+ + + +HRDL A N ++ E+ KI DFGM +
Sbjct: 122 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 132
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 133 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 488 KLGQGGFGPVYWG--RLKDGQ-EIAVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+LG G FG V G R++ Q ++A+K L + + + EE M E ++ +L + +VRL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
G C + E ML+ E L L K+E + ++ +S G+ YL +
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN--- 456
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
+HR+L A N+LL KISDFG++K G + D T R G
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAG 499
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 132
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 133 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 134 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 150
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK-ERLDWRKRFNIIEGISRGL 593
+H N++RL G + LI EY P ++ L+K + D ++ I ++ L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPR----GEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI+DFG
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 135
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 136 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 126 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 137
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 138 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 139 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 134 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 157 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKR-LSKASGQGLE-EFMNEVMVISKLQH 536
+ ++ +K+GQG FG V+ R K GQ++A+K+ L + +G + E+ ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 537 RNLVRLLGCCVEGEEKM--------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
N+V L+ C L++++ L LL + L K L KR +++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQM 133
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ GL Y+HR+ +I+HRD+KA+N+L+ + K++DFG+A+ F
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K+ + I A+K L KA + G+E + EV + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H ++IHRD+K N+LL KI+DFG
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
G C+ E +++ YM + L + +P K+ + + + +++G+ +L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 208
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ + +HRDL A N +LDE+ K++DFG+A+
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 141
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 142 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
G C+ E +++ YM + L + +P K+ + + + +++G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 149
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ + +HRDL A N +LDE+ K++DFG+A+
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
L +LG G FG V G+ K ++AVK + + S +EF E + KL H LV+ G
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
C + ++ EY+ N L L K L+ + + + G+ +L +
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESH---QF 125
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
IHRDL A N L+D +L K+SDFGM + +Q + G
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNE--VMVISKLQHRN 538
+N +L +G+G +G VY G L D + +AVK S A+ Q F+NE + + ++H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 539 LVRLL----GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
+ R + +G E +L+ EY PN SL L DW + ++RGL
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGL 124
Query: 594 LYLHRD------SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
YLH + + I HRDL + N+L+ + ISDFG++ GN+
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
G C+ E +++ YM + L + +P K+ + + + +++G+ +L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 154
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ + +HRDL A N +LDE+ K++DFG+A+
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
G C+ E +++ YM + L + +P K+ + + + +++G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 149
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ + +HRDL A N +LDE+ K++DFG+A+
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
N++L +G+G F V R + G+E+AVK + K + L++ EV ++ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+V+L + L+ EY D L+ KE+ + R +F I + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG-GNQDQADTG 643
+ I+HRDLKA N+LLD ++N KI+DFG + F GN+ A G
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG 174
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
G C+ E +++ YM + L + +P K+ + + + +++G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 150
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ + +HRDL A N +LDE+ K++DFG+A+
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
G C+ E +++ YM + L + +P K+ + + + +++G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 150
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ + +HRDL A N +LDE+ K++DFG+A+
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
N++L +G+G F V R + G+E+AVK + K + L++ EV ++ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+V+L + L+ EY D L+ KE+ + R +F I + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+ I+HRDLKA N+LLD ++N KI+DFG + F
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G L DG++I AVK L++ + G + +F+ E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
G C+ E +++ YM + L + +P K+ + + + +++G+ +L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 147
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ + +HRDL A N +LDE+ K++DFG+A+
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
N++L +G+G F V R + G+E+AVK + K + L++ EV ++ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+V+L + L+ EY D L+ KE+ + R +F I + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+ I+HRDLKA N+LLD ++N KI+DFG + F
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 32/190 (16%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR------LKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
NN + +G+G FG V+ R + +AVK L +AS +F E ++++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPN-------RSLDALLFDPLKKERLDWRKRFN-- 584
+ N+V+LLG C G+ L++EYM RS+ L L R R +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 585 ------------IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK- 631
I ++ G+ YL S + +HRDL N L+ E + KI+DFG+++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 632 IFGGNQDQAD 641
I+ + +AD
Sbjct: 224 IYSADYYKAD 233
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI++FG
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG 155
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKR-LSKASGQGLE-EFMNEVMVISKLQH 536
+ ++ +K+GQG FG V+ R K GQ++A+K+ L + +G + E+ ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 537 RNLVRLLGCCVEGEEKM--------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
N+V L+ C L++++ L LL + L K L KR +++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQM 133
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ GL Y+HR+ +I+HRD+KA+N+L+ + K++DFG+A+ F
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
NN Q LG G FG V G+ ++AVK L S A E M+E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEY--------MPNRSLDALLFDP---LKKERLDWRK 581
L QH N+V LLG C G ++I EY R L DP + L R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +++G+ +L + IHRD+ A N+LL KI DFG+A+
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
N++L +G+G F V R + G+E+AVK + K + L++ EV ++ L H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+V+L + L+ EY D L+ KE+ + R +F I + Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 131
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+ I+HRDLKA N+LLD ++N KI+DFG + F
Sbjct: 132 QKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF 164
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKR-LSKASGQGLE-EFMNEVMVISKLQH 536
+ ++ +K+GQG FG V+ R K GQ++A+K+ L + +G + E+ ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 537 RNLVRLLGCCVEGEEKM--------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
N+V L+ C L++++ L LL + L K L KR +++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQM 133
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ GL Y+HR+ +I+HRD+KA+N+L+ + K++DFG+A+ F
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 29/173 (16%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DG--QEIAVKRLSK-ASGQGLEEFMNEVMVISKL-Q 535
N+ + +G+G FG V R+K DG + A+KR+ + AS +F E+ V+ KL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER-----------------LD 578
H N++ LLG C L EY P+ +L D L+K R L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNL----LDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
++ + ++RG+ YL S+ + IHR+L A NIL+ E KI+DFG+++
Sbjct: 138 SQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKR-LSKASGQGLE-EFMNEVMVISKLQH 536
+ ++ +K+GQG FG V+ R K GQ++A+K+ L + +G + E+ ++ L+H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 537 RNLVRLLGCCVEGEEKM--------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
N+V L+ C L++++ L LL + L K L KR +++
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQM 132
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ GL Y+HR+ +I+HRD+KA+N+L+ + K++DFG+A+ F
Sbjct: 133 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 175
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
A +F++ LG+G FG VY R K + I A+K L KA + G+E + EV + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N++RL G + LI EY P L + + K + D ++ I ++ L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
Y H R+IHRD+K N+LL KI++FG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG 156
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I+ G+
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAEGMN 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 129 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
+E A +S +LGQG FG VY G +KD E +A+K +++A+ EF+N
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
E V+ + ++VRLLG +G+ ++I E M L + L L+ E +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 123
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
K + I+ G+ YL+ + + +HRDL A N + E+ KI DFGM +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
N++L +G+G F V R + G+E+AVK + K + L++ EV ++ L H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+V+L + L+ EY D L+ KE+ + R +F I + Y H
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK-EARAKFR---QIVSAVQYCH 123
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+ I+HRDLKA N+LLD ++N KI+DFG + F
Sbjct: 124 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 156
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNE 527
FEE + + S+LG+G FG V R G +AVK+L + +F E
Sbjct: 20 FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 74
Query: 528 VMVISKLQHRNLVRLLGCCV-EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
+ ++ L +V+ G G + + L+ EY+P+ L L + RLD +
Sbjct: 75 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLY 132
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL SR R +HRDL A NIL++ E + KI+DFG+AK+ ++D
Sbjct: 133 SSQICKGMEYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 182
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+NF+ LG+G FG V R+K+ G AVK L K +E M E ++S ++
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-WRKRFNIIEGISRGLLY 595
+ L CC + +++ N L+F K R D R RF E IS L++
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGG--DLMFHIQKSRRFDEARARFYAAEIIS-ALMF 139
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
LH II+RDLK N+LLD E + K++DFGM K
Sbjct: 140 LHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNE 527
FEE + + S+LG+G FG V R G +AVK+L + +F E
Sbjct: 7 FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 61
Query: 528 VMVISKLQHRNLVRLLGCCV-EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
+ ++ L +V+ G G + + L+ EY+P+ L L + RLD +
Sbjct: 62 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLY 119
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL SR R +HRDL A NIL++ E + KI+DFG+AK+ ++D
Sbjct: 120 SSQICKGMEYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 169
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
N L LG G FG VY G++ ++AVK L + + E +F+ E ++ISKL
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
H+N+VR +G ++ + ++ E M L + L + P + L ++ I+
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G+S
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLS 117
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 135
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG AK+ G + + A+ G+V
Sbjct: 136 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 185
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNE 527
FEE + + S+LG+G FG V R G +AVK+L + +F E
Sbjct: 8 FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 62
Query: 528 VMVISKLQHRNLVRLLGCCV-EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
+ ++ L +V+ G G + + L+ EY+P+ L L + RLD +
Sbjct: 63 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLY 120
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL SR R +HRDL A NIL++ E + KI+DFG+AK+ ++D
Sbjct: 121 SSQICKGMEYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 170
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
NN Q LG G FG V G+ ++AVK L S A E M+E+ ++S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------FDPLKKERLDWRKRFNI 585
L QH N+V LLG C G ++I EY L L D L+ R +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+++G+ +L + IHRD+ A N+LL KI DFG+A+
Sbjct: 158 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 12/163 (7%)
Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+G+G G V R K G+++AVK + Q E NEV+++ QH N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ GEE ++ E++ +L D + + RL+ + + E + + L YLH +IH
Sbjct: 112 LVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 607 RDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGRVVGT 648
RD+K+ +ILL + K+SDFG A+I ++D +VGT
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQI---SKDVPKRKXLVGT 204
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG AK+ G + + A+ G+V
Sbjct: 134 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG AK+ G + + A+ G+V
Sbjct: 134 YLE-DRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRN 538
L +G GGFG VY G E+AVK Q +E E + + L+H N
Sbjct: 9 LTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
++ L G C++ L+ E+ L+ +L +R+ N I+RG+ YLH
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 599 DSRLRIIHRDLKASNILLDEELNP--------KISDFGMAK 631
++ + IIHRDLK+SNIL+ +++ KI+DFG+A+
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
N L LG G FG VY G++ ++AVK L + + E +F+ E ++ISKL
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
H+N+VR +G ++ + ++ E M L + L + P + L ++ I+
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
N++L +G+G F V R + G+E+AV+ + K + L++ EV ++ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+V+L + L+ EY D L+ KE+ + R +F I + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK--IFGGNQDQ 639
+ I+HRDLKA N+LLD ++N KI+DFG + FG D+
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE 171
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
N++L +G+G F V R + G+E+AV+ + K + L++ EV ++ L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+V+L + L+ EY D L+ KE+ + R +F I + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+ I+HRDLKA N+LLD ++N KI+DFG + F
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG AK+ G + + A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 83/152 (54%), Gaps = 14/152 (9%)
Query: 484 QLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL 542
++ +LG G FG VY + K+ G A K + S + LE+++ E+ +++ H +V+L
Sbjct: 14 EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 73
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL----YLHR 598
LG + ++ E+ P ++DA++ + LD I+ + R +L +LH
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAVDAIMLE------LDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
RIIHRDLKA N+L+ E + +++DFG++
Sbjct: 128 K---RIIHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG AK+ G + + A+ G+V
Sbjct: 134 YLE-DRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG AK+ G + + A+ G+V
Sbjct: 139 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
H N+V+LL + L++E++ D + L L K + + + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 118
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 154
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 24/168 (14%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
++F+ + LGQG FG V R D + A+K++ + + + L ++EVM+++ L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQY 63
Query: 539 LVRLLGC------------CVEGEEKMLI-YEYMPNRSL-DALLFDPLKKERLD-WRKRF 583
+VR V+ + + I EY N +L D + + L ++R + WR
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
I+E +S Y+H IIHRDLK NI +DE N KI DFG+AK
Sbjct: 124 QILEALS----YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
NN Q LG G FG V G+ ++AVK L S A E M+E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------FDPLKKERLDWRKRFNI 585
L QH N+V LLG C G ++I EY L L D L+ R +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+++G+ +L + IHRD+ A N+LL KI DFG+A+
Sbjct: 166 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
H N+V+LL + L++E++ D + L L K + + + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 121
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 117 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMP---NRSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 117 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 155
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
H N+V+LL + L++E++ D + L L K + + + +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 120
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNE 527
FEE + + S+LG+G FG V R G +AVK+L + +F E
Sbjct: 4 FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 58
Query: 528 VMVISKLQHRNLVRLLGCCVEG--EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
+ ++ L +V+ G E L+ EY+P+ L L + RLD +
Sbjct: 59 IQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLY 116
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I +G+ YL SR R +HRDL A NIL++ E + KI+DFG+AK+ ++D
Sbjct: 117 SSQICKGMEYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 166
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 83/152 (54%), Gaps = 14/152 (9%)
Query: 484 QLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL 542
++ +LG G FG VY + K+ G A K + S + LE+++ E+ +++ H +V+L
Sbjct: 22 EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 81
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL----YLHR 598
LG + ++ E+ P ++DA++ + LD I+ + R +L +LH
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAVDAIMLE------LDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
RIIHRDLKA N+L+ E + +++DFG++
Sbjct: 136 K---RIIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 119 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 119 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 117
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 118 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 117
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 118 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMP---NRSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 119 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 157
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 12/161 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQHR 537
++ L LG G FG V G+ + G ++AVK L++ + L+ + E+ + +H
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYL 596
++++L + ++ EY+ LFD + K RLD ++ + + I G+ Y
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSG----GELFDYICKNGRLDEKESRRLFQQILSGVDYC 132
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
HR ++HRDLK N+LLD +N KI+DFG++ + +
Sbjct: 133 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
NN Q LG G FG V G+ ++AVK L S A E M+E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDW 579
L QH N+V LLG C G ++I EY L L ++P +E+L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R + +++G+ +L + IHRD+ A N+LL KI DFG+A+
Sbjct: 166 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ L G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 139 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ L G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 117
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 118 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 156
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 117 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 155
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKLQH 536
+F + LG+G FG VY R + + I A+K L K + G+E + EV + S L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
N++RL G + LI EY P L + + K R D ++ I ++ L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
H R+IHRD+K N+LL KI+DFG
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ L G FG VY G + +G+++ A+K L +A S + +E ++E V++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 139 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 119
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 120 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 24/168 (14%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
++F+ + LGQG FG V R D + A+K++ + + + L ++EV +++ L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQY 63
Query: 539 LVRLLGC------------CVEGEEKMLI-YEYMPNRSL-DALLFDPLKKERLD-WRKRF 583
+VR V+ + + I EY NR+L D + + L ++R + WR
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
I+E +S Y+H IIHR+LK NI +DE N KI DFG+AK
Sbjct: 124 QILEALS----YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
N++L +G+G F V R + G+E+AVK + K + L++ EV + L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+V+L + L+ EY D L+ KE+ + R +F I + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG-GNQDQADTG 643
+ I+HRDLKA N+LLD + N KI+DFG + F GN+ A G
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG 174
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 117 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 489 LGQGGFG-PVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
LG+G FG + + G+ + +K L + + F+ EV V+ L+H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
+ + I EY+ +L ++ + W +R + + I+ G+ YLH + IIHR
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
DL + N L+ E N ++DFG+A++ + Q + R
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 117
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 124
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 125 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 161
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 117
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 117
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 118
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 119 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 124
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 125 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 161
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 121
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 122 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKLQH 536
+F + LG+G FG VY R + + I A+K L K + G+E + EV + S L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
N++RL G + LI EY P L + + K R D ++ I ++ L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
H R+IHRD+K N+LL KI+DFG
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKL 534
A ++ L LG+G +G V + +E +AVK + K + E E+ + L
Sbjct: 1 APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
H N+V+ G EG + L EY L + + D ++ F+ + G++
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVV 117
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
YLH + I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 118 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 169
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 83/179 (46%), Gaps = 31/179 (17%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
NN Q LG G FG V G+ ++AVK L S A E M+E+ ++S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEY--------MPNRSLDALLF-------DP--LKKE 575
L QH N+V LLG C G ++I EY R +A+L DP L KE
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 576 R---LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
L+ R + +++G+ +L + IHRD+ A N+LL KI DFG+A+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 25/200 (12%)
Query: 454 KLSATNVNTVKLQDLPLFQFEELATATN--------NFQLSSKLGQGGFGPVYWGRLK-- 503
KLS +T+ P + F ++ + N L LG G FG VY G++
Sbjct: 2 KLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGM 61
Query: 504 ----DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
++AVK L + + E +F+ E ++ISK H+N+VR +G ++ + ++ E
Sbjct: 62 PNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 121
Query: 559 MPNRSLDALLFD----PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
M L + L + P + L ++ I+ G YL + IHRD+ A N
Sbjct: 122 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNC 178
Query: 615 LLD---EELNPKISDFGMAK 631
LL KI DFGMA+
Sbjct: 179 LLTCPGPGRVAKIGDFGMAR 198
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
NN Q LG G FG V G+ ++AVK L S A E M+E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEY--------MPNRSLDALLFDP---LKKERLDWRK 581
L QH N+V LLG C G ++I EY R L DP + R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +++G+ +L + IHRD+ A N+LL KI DFG+A+
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
F+ LG G FG VY G + +G+++ A+ L +A S + +E ++E V++ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+ ++ RLLG C+ + LI + MP L L + K+ + + N I++G+
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 165
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
YL D RL +HRDL A N+L+ + KI+DFG+AK+ G + + A+ G+V
Sbjct: 166 YLE-DRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
N L LG G FG VY G++ ++AVK L + + E +F+ E ++ISK
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
H+N+VR +G ++ + ++ E M L + L + P + L ++ I+
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
N L LG G FG VY G++ ++AVK L + + E +F+ E ++ISK
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
H+N+VR +G ++ + ++ E M L + L + P + L ++ I+
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISK 533
N L LG G FG VY G++ ++AVK L + + E +F+ E ++ISK
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGI 589
H+N+VR +G ++ + ++ E M L + L + P + L ++ I
Sbjct: 82 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
+ G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 142 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
N L LG G FG VY G++ ++AVK L + + E +F+ E ++ISK
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
H+N+VR +G ++ + ++ E M L + L + P + L ++ I+
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
N L LG G FG VY G++ ++AVK L + + E +F+ E ++ISK
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
H+N+VR +G ++ + ++ E M L + L + P + L ++ I+
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
N L LG G FG VY G++ ++AVK L + + E +F+ E ++ISK
Sbjct: 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 131
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
H+N+VR +G ++ + ++ E M L + L + P + L ++ I+
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 192 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 484 QLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRL-SKASGQGLEEFMNEVMVISKLQHRN 538
++ +G G FG V G LK G+ +A+K L S + + +F++E ++ + H N
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
++ L G + M+I E+M N SLD+ L + + ++ GI+ G+ YL
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYL-- 125
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+ + +HR L A NIL++ L K+SDFG+++
Sbjct: 126 -ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFL 159
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ + +DA PL K L F +++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 119 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISK 533
N L LG G FG VY G++ ++AVK L + + E +F+ E ++ISK
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGI 589
H+N+VR +G ++ + ++ E M L + L + P + L ++ I
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
+ G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 168 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKL 534
N L LG G FG VY G++ ++AVK L + S Q +F+ E ++ISK
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF 105
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
H+N+VR +G ++ + ++ E M L + L + P + L ++ I+
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 171
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
N L LG G FG VY G++ ++AVK L + + E +F+ E ++ISK
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
H+N+VR +G ++ + ++ E M L + L + P + L ++ I+
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
+ NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
H N+V+LL + L++E++ +DA PL K L F +++G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
++ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 119 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISK 533
N L LG G FG VY G++ ++AVK L + + E +F+ E ++ISK
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGI 589
H+N+VR +G ++ + ++ E M L + L + P + L ++ I
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
+ G YL + IHRD+ A N LL KI DFGMA+
Sbjct: 167 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKD---GQEIAVKRLSKASGQGLEE--FMNEVMVI 531
T + + LG+G FG V + KD QE AVK ++KAS + + + EV ++
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGIS 590
KL H N+++L + ++ E LFD + K++R II+ +
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTG----GELFDEIIKRKRFSEHDAARIIKQVF 131
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQAD 641
G+ Y+H+ + I+HRDLK NILL +++ + KI DFG++ F N D
Sbjct: 132 SGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L C + E+ Y N L + FD + RF E +S
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 148
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 149 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKD---GQEIAVKRLSKASGQGLEE--FMNEVMVI 531
T + + LG+G FG V + KD QE AVK ++KAS + + + EV ++
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGIS 590
KL H N+++L + ++ E LFD + K++R II+ +
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTG----GELFDEIIKRKRFSEHDAARIIKQVF 131
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQAD 641
G+ Y+H+ + I+HRDLK NILL +++ + KI DFG++ F N D
Sbjct: 132 SGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPVY---WGRLKDG--QEIAVKRLSKASGQGLEE-FMNEVMVISKLQHRNLVRL 542
LG+G FG V + DG + +AVK L + G L + E+ ++ L H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 543 LGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
GCC + EK L+ EY+P SL D L + + + + I G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMAYLHAQ- 131
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
IHR L A N+LLD + KI DFG+AK
Sbjct: 132 --HYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
++ +G+G FG VY GR I + + + + L+ F EVM + +H N+V
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+G C+ +I R+L +++ D K LD K I + I +G+ YLH
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 601 RLRIIHRDLKASNILLDEELNPK--ISDFGMAKIFG 634
I+H+DLK+ N+ D N K I+DFG+ I G
Sbjct: 151 ---ILHKDLKSKNVFYD---NGKVVITDFGLFSISG 180
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPVY---WGRLKDG--QEIAVKRLSKASGQGLEE-FMNEVMVISKLQHRNLVRL 542
LG+G FG V + DG + +AVK L + G L + E+ ++ L H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 543 LGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
GCC + EK L+ EY+P SL D L + + + + I G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMAYLHAQ- 130
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
IHR L A N+LLD + KI DFG+AK
Sbjct: 131 --HYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 25/200 (12%)
Query: 454 KLSATNVNTVKLQDLPLFQFEELATATN--------NFQLSSKLGQGGFGPVYWGRLK-- 503
KLS +T+ P + F ++ + N L LG G FG VY G++
Sbjct: 22 KLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGM 81
Query: 504 ----DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
++AVK L + + E +F+ E ++ISK H+N+VR +G ++ + ++ E
Sbjct: 82 PNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 141
Query: 559 MPNRSLDALLFD----PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
M L + L + P + L ++ I+ G YL + IHRD+ A N
Sbjct: 142 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNC 198
Query: 615 LLD---EELNPKISDFGMAK 631
LL KI DFGMA+
Sbjct: 199 LLTCPGPGRVAKIGDFGMAR 218
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G +G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 489 LGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
LG+G +G VY GR L + IA+K + + + + E+ + L+H+N+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 548 EGEEKMLIYEYMPNRSLDALL---FDPLKKERLDWRKRFNI-IEGISRGLLYLHRDSRLR 603
E + E +P SL ALL + PLK D + + I GL YLH + +
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLK----DNEQTIGFYTKQILEGLKYLHDN---Q 142
Query: 604 IIHRDLKASNILLDEELNP-KISDFGMAKIFGG 635
I+HRD+K N+L++ KISDFG +K G
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 24/165 (14%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+K RL + + E+ ++ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYE--------YMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
N+V+LL + L++E +M +L + PL K L F +++G+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPL-PLIKSYL-----FQLLQGL 115
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ + H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 116 A----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLS-KASGQGLEEF-MNEVMVISKLQHRN 538
+Q K+G+G +G VY + G+ +A+KR+ A +G+ + E+ ++ +L H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V L+ L++E+M + L +L D K D + + + + + RG+ + H+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQ 137
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
RI+HRDLK N+L++ + K++DFG+A+ FG
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHR 537
+F++ + LG+G F VY + G E+A+K + K + ++ NEV + +L+H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+++ L + L+ E N ++ L + +K + + F + I G+LYLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF--MHQIITGMLYLH 129
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
I+HRDL SN+LL +N KI+DFG+A
Sbjct: 130 SHG---ILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 489 LGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
LG+G +G VY GR L + IA+K + + + + E+ + L+H+N+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 548 EGEEKMLIYEYMPNRSLDALL---FDPLKKERLDWRKRFNI-IEGISRGLLYLHRDSRLR 603
E + E +P SL ALL + PLK D + + I GL YLH + +
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLK----DNEQTIGFYTKQILEGLKYLHDN---Q 128
Query: 604 IIHRDLKASNILLDEELNP-KISDFGMAKIFGG 635
I+HRD+K N+L++ KISDFG +K G
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 161
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLS-KASGQGLEEF-MNEVMVISKLQHRN 538
+Q K+G+G +G VY + G+ +A+KR+ A +G+ + E+ ++ +L H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V L+ L++E+M + L +L D K D + + + + + RG+ + H+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQ 137
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
RI+HRDLK N+L++ + K++DFG+A+ FG
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLE 522
+F +E + L +LGQG FG VY G +D +AVK +++ AS +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD---- 578
EF+NE V+ ++VRLLG +G+ +++ E M + L + L L+ E +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 124
Query: 579 ----WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
++ + I+ G+ YL+ + +HRDL A N ++ + KI DFGM +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQ 535
A +L +G+G FG V G + G ++AVK + + A+ Q F+ E V+++L+
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLR 244
Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSL---------DALLFDPLKKERLDWRKRFNI 585
H NLV+LLG VE + + ++ EYM SL L D L K LD +
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+EG + +HRDL A N+L+ E+ K+SDFG+ K QD
Sbjct: 305 LEGNN-------------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 344
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLE 522
+F +E + L +LGQG FG VY G +D +AVK +++ AS +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD---- 578
EF+NE V+ ++VRLLG +G+ +++ E M + L + L L+ E +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 124
Query: 579 ----WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
++ + I+ G+ YL+ + +HRDL A N ++ + KI DFGM +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLE 522
+F +E + L +LGQG FG VY G +D +AVK +++ AS +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD---- 578
EF+NE V+ ++VRLLG +G+ +++ E M + L + L L+ E +
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 121
Query: 579 ----WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
++ + I+ G+ YL+ + +HRDL A N ++ + KI DFGM +
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLE 522
+F +E + L +LGQG FG VY G +D +AVK +++ AS +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD---- 578
EF+NE V+ ++VRLLG +G+ +++ E M + L + L L+ E +
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 124
Query: 579 ----WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
++ + I+ G+ YL+ + +HRDL A N ++ + KI DFGM +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 456 SATNVNTVKLQDLPLFQFEELATATNN---FQLSSKLGQGGFGPVYWGRLKDGQEIAV-K 511
S ++ T L + Q+E + N +++ +LG G FG VY + K+ +A K
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAK 68
Query: 512 RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP 571
+ S + LE++M E+ +++ H N+V+LL ++ E+ ++DA++
Sbjct: 69 VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM--- 125
Query: 572 LKKERLDWRKRFNII-EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
L+ ER + ++ + L YLH + +IIHRDLKA NIL + + K++DFG++
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQ 535
A +L +G+G FG V G + G ++AVK + + A+ Q F+ E V+++L+
Sbjct: 8 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLR 63
Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSL---------DALLFDPLKKERLDWRKRFNI 585
H NLV+LLG VE + + ++ EYM SL L D L K LD +
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 123
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+EG + +HRDL A N+L+ E+ K+SDFG+ K QD
Sbjct: 124 LEGNN-------------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 163
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 456 SATNVNTVKLQDLPLFQFEELATATNN---FQLSSKLGQGGFGPVYWGRLKDGQEIAV-K 511
S ++ T L + Q+E + N +++ +LG G FG VY + K+ +A K
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAK 68
Query: 512 RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP 571
+ S + LE++M E+ +++ H N+V+LL ++ E+ ++DA++
Sbjct: 69 VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM--- 125
Query: 572 LKKERLDWRKRFNII-EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
L+ ER + ++ + L YLH + +IIHRDLKA NIL + + K++DFG++
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQ 535
A +L +G+G FG V G + G ++AVK + + A+ Q F+ E V+++L+
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLR 57
Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSL---------DALLFDPLKKERLDWRKRFNI 585
H NLV+LLG VE + + ++ EYM SL L D L K LD +
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+EG + +HRDL A N+L+ E+ K+SDFG+ K QD
Sbjct: 118 LEGNN-------------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 157
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+ RL + + E+ ++ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 117
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
NFQ K+G+G +G VY R K G+ +A+ RL + + E+ ++ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
N+V+LL + L++E++ + +DA PL K L F +++G++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ H R++HRDLK N+L++ E K++DFG+A+ FG
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 456 SATNVNTVKLQDLPLFQFEELATATNN---FQLSSKLGQGGFGPVYWGRLKDGQEIAV-K 511
S ++ T L + Q+E + N +++ +LG G FG VY + K+ +A K
Sbjct: 9 SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAK 68
Query: 512 RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP 571
+ S + LE++M E+ +++ H N+V+LL ++ E+ ++DA++
Sbjct: 69 VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM--- 125
Query: 572 LKKERLDWRKRFNII-EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
L+ ER + ++ + L YLH + +IIHRDLKA NIL + + K++DFG++
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQ 535
A +L +G+G FG V G + G ++AVK + + A+ Q F+ E V+++L+
Sbjct: 17 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLR 72
Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSL---------DALLFDPLKKERLDWRKRFNI 585
H NLV+LLG VE + + ++ EYM SL L D L K LD +
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+EG + +HRDL A N+L+ E+ K+SDFG+ K QD
Sbjct: 133 LEGNN-------------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 172
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 18/173 (10%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKD---GQEIAVKRLSKASGQGLEE--FMNEVMVIS 532
T + + LG+G FG V + KD QE AVK ++KAS + + + EV ++
Sbjct: 19 TFAERYNIVCMLGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76
Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISR 591
KL H N+++L + ++ E LFD + K++R II+ +
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTG----GELFDEIIKRKRFSEHDAARIIKQVFS 132
Query: 592 GLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQAD 641
G+ Y+H+ + I+HRDLK NILL +++ + KI DFG++ F N D
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 95/171 (55%), Gaps = 17/171 (9%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGR-LKDGQE-IAVKRLSKASGQ-GLE-EFMNEVMVI 531
L A ++ +++G+G +G V+ R LK+G +A+KR+ +G+ G+ + EV V+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 532 SKLQ---HRNLVRLLGCCV----EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
L+ H N+VRL C + E K+ L++E++ ++ L L D + + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIK 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+++ + RGL +LH R++HRDLK NIL+ K++DFG+A+I+
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPVY---WGRLKDG--QEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
LG+G FG V + DG + +AVK L G Q + E+ ++ L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 543 LGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
GCC + EK L+ EY+P SL D L + + + + I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLHSQ- 136
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
IHR+L A N+LLD + KI DFG+AK
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 95/171 (55%), Gaps = 17/171 (9%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGR-LKDGQE-IAVKRLSKASGQ-GLE-EFMNEVMVI 531
L A ++ +++G+G +G V+ R LK+G +A+KR+ +G+ G+ + EV V+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 532 SKLQ---HRNLVRLLGCCV----EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
L+ H N+VRL C + E K+ L++E++ ++ L L D + + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIK 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+++ + RGL +LH R++HRDLK NIL+ K++DFG+A+I+
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+GQG G VY + GQE+A+++++ E +NE++V+ + ++ N+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ EY+ SL D + + +D + + + L +LH + ++IH
Sbjct: 87 LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 607 RDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
RD+K+ NILL + + K++DFG Q + T +VGT
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 179
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 95/171 (55%), Gaps = 17/171 (9%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGR-LKDGQE-IAVKRLSKASGQ-GLE-EFMNEVMVI 531
L A ++ +++G+G +G V+ R LK+G +A+KR+ +G+ G+ + EV V+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 532 SKLQ---HRNLVRLLGCCV----EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
L+ H N+VRL C + E K+ L++E++ ++ L L D + + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIK 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+++ + RGL +LH R++HRDLK NIL+ K++DFG+A+I+
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 89/161 (55%), Gaps = 22/161 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGRL--KDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQ-HR 537
++L KLG+G +G + W + + G+ +AVK++ A + + E+M++++L H
Sbjct: 11 YELVKKLGKGAYG-IVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 538 NLVRLLGCCVEGEEK--MLIYEYMP---NRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
N+V LL ++ L+++YM + + A + +P+ K+ ++ + +
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY--------VVYQLIKV 121
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+ YLH ++HRD+K SNILL+ E + K++DFG+++ F
Sbjct: 122 IKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSF 159
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPVY---WGRLKDG--QEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
LG+G FG V + DG + +AVK L G Q + E+ ++ L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 543 LGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
GCC + EK L+ EY+P SL D L + + + + I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLHAQ- 136
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
IHR+L A N+LLD + KI DFG+AK
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLEEFMN 526
+E + L +LGQG FG VY G +D +AVK +++ AS + EF+N
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
E V+ ++VRLLG +G+ +++ E M + L + L L+ E +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPT 128
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
++ + I+ G+ YL+ + +HRDL A N ++ + KI DFGM +
Sbjct: 129 LQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+GQG G VY + GQE+A+++++ E +NE++V+ + ++ N+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ EY+ SL D + + +D + + + L +LH + ++IH
Sbjct: 87 LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 607 RDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGRVVGT 648
RD+K+ NILL + + K++DFG A+I +Q+ +VGT
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSEMVGT 179
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
++ L LG+G G V + +E +AVK + K + E E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
N+V+ G EG + L EY L + + D ++ F+ + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
+ I HRD+K N+LLDE N KISDFG+A +F N + ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPVY---WGRLKDG--QEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
LG+G FG V + DG + +AVK L +G Q + E+ ++ L H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 543 LGCCVEG--EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
GCC + L+ EY+P SL D L + + + + I G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLHAQ- 153
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
IHRDL A N+LLD + KI DFG+AK
Sbjct: 154 --HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+GQG G VY + GQE+A+++++ E +NE++V+ + ++ N+V L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ EY+ SL D + + +D + + + L +LH + ++IH
Sbjct: 87 LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 607 RDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGRVVGT 648
RD+K+ NILL + + K++DFG A+I +Q+ +VGT
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVGT 179
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+GQG G VY + GQE+A+++++ E +NE++V+ + ++ N+V L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ EY+ SL D + + +D + + + L +LH + ++IH
Sbjct: 88 LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 607 RDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGRVVGT 648
RD+K+ NILL + + K++DFG A+I +Q+ +VGT
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVGT 180
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 27/171 (15%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEF-MNEVMVISKLQ 535
++++ F+ KLG G + VY G K G +A+K + S +G + E+ ++ +L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS----- 590
H N+VRL + L++E+M N K+ +D R N G+
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDL----------KKYMDSRTVGNTPRGLELNLVK 111
Query: 591 -------RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+GL + H + +I+HRDLK N+L+++ K+ DFG+A+ FG
Sbjct: 112 YFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 18/167 (10%)
Query: 489 LGQGGFGPVYWGR-LKDGQEI----AVKRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRL 542
LG G FG VY G + DG+ + A+K L + S + +E ++E V++ + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDS 600
LG C+ + L+ + MP L D +++ R L + N I++G+ YL
Sbjct: 85 LGICLTSTVQ-LVTQLMPY----GCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED-- 137
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
+R++HRDL A N+L+ + KI+DFG+A++ ++ + AD G+V
Sbjct: 138 -VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 183
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 13/150 (8%)
Query: 489 LGQGGFGPVYWGRLKDGQE----IAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLL 543
+G+G FG VY G D + A+K LS+ + Q +E F+ E +++ L H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 544 GCCV--EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
G + EG +L+ YM + L + P + + F + ++RG+ YL +
Sbjct: 89 GIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEYL---AE 142
Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ +HRDL A N +LDE K++DFG+A+
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 485 LSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLEEFMNEVMVISKLQHR 537
L +LGQG FG VY G +D +AVK +++ AS + EF+NE V+
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD--------WRKRFNIIEGI 589
++VRLLG +G+ +++ E M + L + L L+ E + ++ + I
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ G+ YL+ + +HRDL A N ++ + KI DFGM +
Sbjct: 139 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLS-KASGQGLE-EFMNEVMVISK 533
AT+ + ++ +KLG+G +G VY + +A+KR+ + +G+ + EV ++ +
Sbjct: 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
LQHRN++ L LI+EY N + +P R+ + +I G++
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVN--- 146
Query: 594 LYLHRDSRLRIIHRDLKASNILL---DEELNP--KISDFGMAKIFG 634
+ H SR R +HRDLK N+LL D P KI DFG+A+ FG
Sbjct: 147 -FCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQ--EIAVKRLSK--ASGQGLEEFM 525
+ E++ F L LG+G FG V +LK DG ++AVK L + +EEF+
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEK------MLIYEYMPNRSLDALLFDPLKKER--- 576
E + + H ++ +L+G + K M+I +M + L A L E
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 577 LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA-KIFGG 635
L + + I+ G+ YL S IHRDL A N +L E++ ++DFG++ KI+ G
Sbjct: 134 LPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 636 N 636
+
Sbjct: 191 D 191
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 118
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 475 ELATATNNFQLSSK------LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE--FM 525
+L T FQ K +G+G +G V R KD G+ +A+K+ ++ + + M
Sbjct: 13 DLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM 72
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW----RK 581
E+ ++ +L+H NLV LL C + + L++E++ + LD L P LD+ +
Sbjct: 73 REIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP---NGLDYQVVQKY 129
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
F II GI G + H IIHRD+K NIL+ + K+ DFG A+
Sbjct: 130 LFQIINGI--GFCHSH-----NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 121
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 119
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+GQG G VY + GQE+A+++++ E +NE++V+ + ++ N+V L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ EY+ SL D + + +D + + + L +LH + ++IH
Sbjct: 88 LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 607 RDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
R++K+ NILL + + K++DFG Q + T +VGT
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 180
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE-EFMNEVMVIS 532
E L + QL +G FG V+ +L + + +AVK Q + E+ EV +
Sbjct: 17 ENLYFQSMPLQLLEVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLP 73
Query: 533 KLQHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
++H N+++ +G G + LI + SL D LK + W + +I E
Sbjct: 74 GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLS----DFLKANVVSWNELCHIAET 129
Query: 589 ISRGLLYLHRD-------SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
++RGL YLH D + I HRD+K+ N+LL L I+DFG+A F + D
Sbjct: 130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGD 189
Query: 642 TGRVVGT 648
T VGT
Sbjct: 190 THGQVGT 196
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 120
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 125
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 126 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLEEFMN 526
+E + L +LGQG FG VY G +D +AVK +++ AS + EF+N
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 70
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
E V+ ++VRLLG +G+ +++ E M + L + L L+ E +
Sbjct: 71 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPT 129
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
++ + I+ G+ YL+ + +HR+L A N ++ + KI DFGM +
Sbjct: 130 LQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
+ +L KLG G FG V G G+ +AVK L + + +++F+ EV +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
L HRNL+RL G + KM + E P SL D L+K + L R+ + +
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 124
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
+ G+ YL R IHRDL A N+LL KI DFG+ + N D
Sbjct: 125 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 483 FQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMN---EVMVISKLQHRN 538
+ + LG+G FG V K Q++A+K +S+ + + M E+ + L+H +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLLYL 596
+++L + +++ EY D ++ +K+R+ D +RF + I + Y
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIV----EKKRMTEDEGRRF--FQQIICAIEYC 124
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
HR +I+HRDLK N+LLD+ LN KI+DFG++ I
Sbjct: 125 HRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
+ +L KLG G FG V G G+ +AVK L + + +++F+ EV +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
L HRNL+RL G + KM + E P SL D L+K + L R+ + +
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 130
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
+ G+ YL R IHRDL A N+LL KI DFG+ + N D
Sbjct: 131 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
+ +L KLG G FG V G G+ +AVK L + + +++F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
L HRNL+RL G + KM + E P SL D L+K + L R+ + +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 120
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
+ G+ YL R IHRDL A N+LL KI DFG+ + N D
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 140
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
+ +L KLG G FG V G G+ +AVK L + + +++F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
L HRNL+RL G + KM + E P SL D L+K + L R+ + +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 120
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
+ G+ YL R IHRDL A N+LL KI DFG+ + N D
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 141
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLEEFMN 526
+E + L +LGQG FG VY G +D +AVK +++ AS + EF+N
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
E V+ ++VRLLG +G+ +++ E M + L + L L+ E +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPT 128
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
++ + I+ G+ YL+ + +HR+L A N ++ + KI DFGM +
Sbjct: 129 LQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 140
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 141
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
+ +L KLG G FG V G G+ +AVK L + + +++F+ EV +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
L HRNL+RL G + KM + E P SL D L+K + L R+ + +
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 124
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
+ G+ YL R IHRDL A N+LL KI DFG+ + N D
Sbjct: 125 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 141
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
+ +L KLG G FG V G G+ +AVK L + + +++F+ EV +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
L HRNL+RL G + KM + E P SL D L+K + L R+ + +
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 130
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
+ G+ YL R IHRDL A N+LL KI DFG+ + N D
Sbjct: 131 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
+ +L KLG G FG V G G+ +AVK L + + +++F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
L HRNL+RL G + KM + E P SL D L+K + L R+ + +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 120
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
+ G+ YL R IHRDL A N+LL KI DFG+ + N D
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 144
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 144
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 146
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 147 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 23/163 (14%)
Query: 488 KLGQGGFGPVYWGRLKDGQ-EIAVKRLSKAS-------------GQGLEEFMNEVMVISK 533
KLG G +G V + K+G E A+K + K+ + EE NE+ ++
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
L H N+++L + + L+ E+ L + + + + D NI++ I G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI---INRHKFDECDAANIMKQILSGI 159
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGMAKIF 633
YLH+ + I+HRD+K NILL+ + LN KI DFG++ F
Sbjct: 160 CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 487 SKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
K+G+G +G VY + G+ A+K RL K + E+ ++ +L+H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG-------------ISR 591
+ +L++E++ D +K ++ EG +
Sbjct: 68 VIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ Y H R++HRDLK N+L++ E KI+DFG+A+ FG
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 487 SKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
K+G+G +G VY + G+ A+K RL K + E+ ++ +L+H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG-------------ISR 591
+ +L++E++ D +K ++ EG +
Sbjct: 68 VIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ Y H R++HRDLK N+L++ E KI+DFG+A+ FG
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 487 SKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
K+G+G +G VY + G+ A+K RL K + E+ ++ +L+H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG-------------ISR 591
+ +L++E++ D +K ++ EG +
Sbjct: 68 VIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ Y H R++HRDLK N+L++ E KI+DFG+A+ FG
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F V R L +E A+K L K + E V+S+L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 465 LQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRL--SKASGQGL 521
L ++P +F ++F + LG+G FG VY R K + I A+K L S+ +G+
Sbjct: 4 LAEMPKRKF-----TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV 58
Query: 522 E-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLDW 579
E + E+ + S L+H N++R+ + + L+ E+ P L+ L+K R D
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR----GELYKELQKHGRFDE 114
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
++ +E ++ L Y H ++IHRD+K N+L+ + KI+DFG
Sbjct: 115 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 465 LQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRL--SKASGQGL 521
L ++P +F ++F + LG+G FG VY R K + I A+K L S+ +G+
Sbjct: 3 LAEMPKRKF-----TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV 57
Query: 522 E-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLDW 579
E + E+ + S L+H N++R+ + + L+ E+ P L+ L+K R D
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR----GELYKELQKHGRFDE 113
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
++ +E ++ L Y H ++IHRD+K N+L+ + KI+DFG
Sbjct: 114 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 465 LQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRL--SKASGQGL 521
L ++P +F ++F + LG+G FG VY R K + I A+K L S+ +G+
Sbjct: 3 LAEMPKRKF-----TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV 57
Query: 522 E-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLDW 579
E + E+ + S L+H N++R+ + + L+ E+ P L+ L+K R D
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR----GELYKELQKHGRFDE 113
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
++ +E ++ L Y H ++IHRD+K N+L+ + KI+DFG
Sbjct: 114 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQ-GLE-EFMNEVMVISKLQ 535
AT+ ++ +++G G +G VY R G +A+K + +G+ GL + EV ++ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 536 ---HRNLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
H N+VRL+ C + L++E++ ++ L L D L +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
RGL +LH + I+HRDLK NIL+ K++DFG+A+I+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQ-GLE-EFMNEVMVISKLQ 535
AT+ ++ +++G G +G VY R G +A+K + +G+ GL + EV ++ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 536 ---HRNLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
H N+VRL+ C + L++E++ ++ L L D L +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
RGL +LH + I+HRDLK NIL+ K++DFG+A+I+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQ-GLE-EFMNEVMVISKLQ 535
AT+ ++ +++G G +G VY R G +A+K + +G+ GL + EV ++ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 536 ---HRNLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
H N+VRL+ C + L++E++ ++ L L D L +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
RGL +LH + I+HRDLK NIL+ K++DFG+A+I+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Query: 489 LGQGGFGPVYWGR-LKDGQEIAV----KRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
LG G FG V+ G + +G+ I + K + SG Q + + ++ I L H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDS 600
LG C G L+ +Y+P SL D +++ R L + N I++G+ YL
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
++HR+L A N+LL +++DFG+A + + Q
Sbjct: 154 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Query: 489 LGQGGFGPVYWGR-LKDGQEIAV----KRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
LG G FG V+ G + +G+ I + K + SG Q + + ++ I L H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDS 600
LG C G L+ +Y+P SL D +++ R L + N I++G+ YL
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
++HR+L A N+LL +++DFG+A + + Q
Sbjct: 136 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+G+G G V K G+++AVK++ Q E NEV+++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ E++ +L D + R++ + + + R L YLH +IH
Sbjct: 112 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 607 RDLKASNILLDEELNPKISDFG 628
RD+K+ +ILL + K+SDFG
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFG 186
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 19 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I EY +L L
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
E KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL---SKASGQGLE-EFMNEVMVISKLQH 536
++F++ LG+G FG VY R K I ++ S+ +G+E + E+ + + L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLDWRKRFNIIEGISRGLLY 595
N++RL + LI EY P L+ L+K D ++ I+E ++ L+Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPR----GELYKELQKSCTFDEQRTATIMEELADALMY 138
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
H ++IHRD+K N+LL + KI+DFG
Sbjct: 139 CHGK---KVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 19 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I EY +L L
Sbjct: 74 MLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
E KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 12/158 (7%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKL 534
+ +FQ+ LG G FG V+ R + +G+ A+K L K + +E +E +++S +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGL 593
H ++R+ G + ++ +I +Y+ L +LL K +R + +F E + L
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL---RKSQRFPNPVAKFYAAE-VCLAL 119
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
YLH II+RDLK NILLD+ + KI+DFG AK
Sbjct: 120 EYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAK 154
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 77/177 (43%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F+ LG+G F R L +E A+K L K + E V+S+L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
V+L + E+ Y N L + FD + RF E +S
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 141
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L YLH IIHRDLK NILL+E+++ +I+DFG AK+ QA VGT
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQHR 537
++ L LG G FG V G + G ++AVK L++ + L+ + E+ + +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
++++L + ++ EY+ L + + E ++ R+ F + I + Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF---QQILSAVDYCH 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
R ++HRDLK N+LLD +N KI+DFG++ +
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 19 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I EY +L L
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
E KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQHR 537
++ L LG G FG V G + G ++AVK L++ + L+ + E+ + +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
++++L + ++ EY+ L + + E ++ R+ F + I + Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF---QQILSAVDYCH 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
R ++HRDLK N+LLD +N KI+DFG++ + + D+
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS 170
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFM-NEVMVISKLQHRNLV 540
+ LG G F V K Q+ +A+K ++K + +G E M NE+ V+ K++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
L G LI + + L D ++ ER R F +++ + YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK----YLH-- 133
Query: 600 SRLRIIHRDLKASNIL---LDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L I+HRDLK N+L LDE+ ISDFG++K+ D G V+ T
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLST 177
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRL---SKASGQGLEEFMNEVMVISKLQHRN 538
+++ KLG GG VY ++A+K + + + L+ F EV S+L H+N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLLYL 596
+V ++ E + L+ EY+ +L + PL + N I G+ +
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVD-----TAINFTNQILDGIKHA 127
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
H +RI+HRD+K NIL+D KI DFG+AK T V+GT+
Sbjct: 128 HD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS-LTQTNHVLGTV 176
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFM-NEVMVISKLQHRNLV 540
+ LG G F V K Q+ +A+K ++K + +G E M NE+ V+ K++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
L G LI + + L D ++ ER R F +++ + YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK----YLH-- 133
Query: 600 SRLRIIHRDLKASNIL---LDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L I+HRDLK N+L LDE+ ISDFG++K+ D G V+ T
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLST 177
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFM 525
+F A ++ ++ LG+G FG V + K GQE AVK +SK E +
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
EV ++ +L H N+++L E+K Y + L + + ++R I
Sbjct: 81 REVQLLKQLDHPNIMKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 137
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIFGGNQDQAD 641
I + G+ Y+H++ +I+HRDLK N+LL+ ++ N +I DFG++ F ++ D
Sbjct: 138 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 193
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFM-NEVMVISKLQHRNLV 540
+ LG G F V K Q+ +A+K ++K + +G E M NE+ V+ K++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
L G LI + + L D ++ ER R F +++ + YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK----YLH-- 133
Query: 600 SRLRIIHRDLKASNIL---LDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L I+HRDLK N+L LDE+ ISDFG++K+ D G V+ T
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLST 177
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 19 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I EY +L L
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
E KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
F ++G+G FG VY G +E+ A+K + + + +E+ E+ V+S+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 541 RLLGCCVEGEEKMLIYEYMPNRS-LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
R G ++ + +I EY+ S LD L PL++ + I+ I +GL YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHSE 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMA 630
R IHRD+KA+N+LL E+ + K++DFG+A
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFM-NEVMVISKLQHRNLV 540
+ LG G F V K Q+ +A+K ++K + +G E M NE+ V+ K++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
L G LI + + L D ++ ER R F +++ + YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK----YLH-- 133
Query: 600 SRLRIIHRDLKASNIL---LDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
L I+HRDLK N+L LDE+ ISDFG++K+ D G V+ T
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLST 177
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 19 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I EY +L L
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 134 ARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
E KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 19 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I EY +L L
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
E KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 43/194 (22%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFM 525
+F A ++ ++ LG+G FG V + K GQE AVK +SK E +
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDAL---------LFDPLKKER 576
EV ++ +L H N+++L YE+ ++ L LFD +
Sbjct: 75 REVQLLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIIS-- 119
Query: 577 LDWRKRFN------IIEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDF 627
RKRF+ II + G+ Y+H++ +I+HRDLK N+LL+ ++ N +I DF
Sbjct: 120 ---RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDF 173
Query: 628 GMAKIFGGNQDQAD 641
G++ F ++ D
Sbjct: 174 GLSTHFEASKKMKD 187
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 21/160 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLV 540
F+L +G G +G VY GR +K GQ A+K + +G EE E+ ++ K HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-VTGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 541 RLLGCCVE------GEEKMLIYEYMPNRSLDALLFDP----LKKERLDWRKRFNIIEGIS 590
G ++ ++ L+ E+ S+ L+ + LK+E + + I I
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-----ICREIL 139
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
RGL +LH+ ++IHRD+K N+LL E K+ DFG++
Sbjct: 140 RGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 176
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 36/203 (17%)
Query: 457 ATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPV-----YWGRLKDG-QEIAV 510
+ +V+ K+ + P ++F N L LG+G FG V + + + G +AV
Sbjct: 4 SLSVDAFKILEDPKWEF-----PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAV 58
Query: 511 KRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF 569
K L + AS L + ++E V+ ++ H ++++L G C + +LI EY SL L
Sbjct: 59 KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR 118
Query: 570 DPLK-------------KERLDWRKRFNIIEG--------ISRGLLYLHRDSRLRIIHRD 608
+ K LD + G IS+G+ YL + ++++HRD
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRD 175
Query: 609 LKASNILLDEELNPKISDFGMAK 631
L A NIL+ E KISDFG+++
Sbjct: 176 LAARNILVAEGRKMKISDFGLSR 198
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQ-GLEEFMNEVMVISKLQHRN 538
++++L +G G V +E +A+KR++ Q ++E + E+ +S+ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRS-LDALLFDPLKKER----LDWRKRFNIIEGISRGL 593
+V V +E L+ + + S LD + K E LD I+ + GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
YLH++ + IHRD+KA NILL E+ + +I+DFG++ D
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD 171
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 456 SATNVNTVKLQDLPLFQFEELATA----TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAV 510
SA T+ ++ P F +EL +Q S +G G +G V +K G +IAV
Sbjct: 22 SAAAPFTMSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAV 81
Query: 511 KRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDAL 567
K+LS+ S + E+ ++ ++H N++ LL + Y+ + A
Sbjct: 82 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGAD 141
Query: 568 LFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF 627
L + +K ++L +I I RGL Y+H IIHRDLK SN+ ++E+ KI DF
Sbjct: 142 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDF 198
Query: 628 GMAKIFGGNQDQADTGRVV 646
G+A+ + D TG V
Sbjct: 199 GLAR----HTDDEMTGYVA 213
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
L LG+G FG V G KD ++AVK L S A+ + L + ++E+ ++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
+H+N++ LLG C + +I EY +L L F+P +E+L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ ++RG+ YL + + IHRDL A N+L+ E+ KI+DFG+A+
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 36/203 (17%)
Query: 457 ATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPV-----YWGRLKDG-QEIAV 510
+ +V+ K+ + P ++F N L LG+G FG V + + + G +AV
Sbjct: 4 SLSVDAFKILEDPKWEF-----PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAV 58
Query: 511 KRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF 569
K L + AS L + ++E V+ ++ H ++++L G C + +LI EY SL L
Sbjct: 59 KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR 118
Query: 570 DPLK-------------KERLDWRKRFNIIEG--------ISRGLLYLHRDSRLRIIHRD 608
+ K LD + G IS+G+ YL + ++++HRD
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRD 175
Query: 609 LKASNILLDEELNPKISDFGMAK 631
L A NIL+ E KISDFG+++
Sbjct: 176 LAARNILVAEGRKMKISDFGLSR 198
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFM 525
+F A ++ ++ LG+G FG V + K GQE AVK +SK E +
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
EV ++ +L H N+++L E+K Y + L + + ++R I
Sbjct: 98 REVQLLKQLDHPNIMKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 154
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIFGGNQDQAD 641
I + G+ Y+H++ +I+HRDLK N+LL+ ++ N +I DFG++ F ++ D
Sbjct: 155 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 210
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQ-GLEEFMNEVMVISKLQHRN 538
++++L +G G V +E +A+KR++ Q ++E + E+ +S+ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRS-LDALLFDPLKKER----LDWRKRFNIIEGISRGL 593
+V V +E L+ + + S LD + K E LD I+ + GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
YLH++ + IHRD+KA NILL E+ + +I+DFG++ D
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD 176
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFM 525
+F A ++ ++ LG+G FG V + K GQE AVK +SK E +
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
EV ++ +L H N+++L E+K Y + L + + ++R I
Sbjct: 99 REVQLLKQLDHPNIMKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 155
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIFGGNQDQAD 641
I + G+ Y+H++ +I+HRDLK N+LL+ ++ N +I DFG++ F ++ D
Sbjct: 156 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 211
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 11 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 65
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I EY +L L
Sbjct: 66 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 125
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 126 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 182
Query: 617 DEELNPKISDFGMAK 631
E KI+DFG+A+
Sbjct: 183 TENNVMKIADFGLAR 197
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
Query: 481 NNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVI 531
+ L LG+G FG V + K+ +AVK L A+ + L + ++E+ ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 532 SKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------------FDPLKKERL 577
+ +H+N++ LLG C + +I EY +L L + + +E++
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
++ + ++RG+ YL + + IHRDL A N+L+ E KI+DFG+A+
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 8/141 (5%)
Query: 492 GGFGPVYWGRLKDGQEIAV-KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE 550
G FG VY + K+ +A K + S + LE++M E+ +++ H N+V+LL
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII-EGISRGLLYLHRDSRLRIIHRDL 609
++ E+ ++DA++ L+ ER + ++ + L YLH + +IIHRDL
Sbjct: 81 NLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 134
Query: 610 KASNILLDEELNPKISDFGMA 630
KA NIL + + K++DFG++
Sbjct: 135 KAGNILFTLDGDIKLADFGVS 155
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 19 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I EY +L L
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
E +I+DFG+A+
Sbjct: 191 TENNVMRIADFGLAR 205
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 8 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 62
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I EY +L L
Sbjct: 63 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 122
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 123 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 179
Query: 617 DEELNPKISDFGMAK 631
E KI+DFG+A+
Sbjct: 180 TENNVMKIADFGLAR 194
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 6 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 60
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I EY +L L
Sbjct: 61 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 120
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 121 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLV 177
Query: 617 DEELNPKISDFGMAK 631
E KI+DFG+A+
Sbjct: 178 TENNVMKIADFGLAR 192
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
L LG+G FG V G KD ++AVK L S A+ + L + ++E+ ++ +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
+H+N++ LLG C + +I EY +L L ++P +E+L +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ ++RG+ YL + + IHRDL A N+L+ E+ KI+DFG+A+
Sbjct: 193 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 483 FQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
F ++G+G FG V+ G + Q +A+K + + + +E+ E+ V+S+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+ G ++G + +I EY+ S D L+ D + +++ I +GL YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSA----LDLLRAGPFDEFQIATMLKEILKGLDYLHSEK 140
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
+ IHRD+KA+N+LL E+ + K++DFG+A Q + +T VGT
Sbjct: 141 K---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGT 183
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 26/174 (14%)
Query: 481 NNFQLSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVI 531
+ L LG+G FG V G KD ++AVK L S A+ + L + ++E+ ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 532 SKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERL 577
+ +H+N++ LLG C + +I EY +L L ++P +E+L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ + ++RG+ YL + + IHRDL A N+L+ E+ KI+DFG+A+
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
L LG+G FG V G KD ++AVK L S A+ + L + ++E+ ++ +
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
+H+N++ LLG C + +I EY +L L ++P +E+L +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ ++RG+ YL + + IHRDL A N+L+ E+ KI+DFG+A+
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
+ QL +G FG V+ +L + +AVK Q + E+ ++H NL++
Sbjct: 16 SLQLLEIKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQ 73
Query: 542 LLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+ G E LI + SL D LK + W + ++ E +SRGL YLH
Sbjct: 74 FIAAEKRGSNLEVELWLITAFHDKGSLT----DYLKGNIITWNELCHVAETMSRGLSYLH 129
Query: 598 RD--------SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
D + I HRD K+ N+LL +L ++DFG+A F + DT VGT
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGT 188
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
L LG+G FG V G KD ++AVK L S A+ + L + ++E+ ++ +
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
+H+N++ LLG C + +I EY +L L ++P +E+L +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ ++RG+ YL + + IHRDL A N+L+ E+ KI+DFG+A+
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
L LG+G FG V G KD ++AVK L S A+ + L + ++E+ ++ +
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
+H+N++ LLG C + +I EY +L L ++P +E+L +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ ++RG+ YL + + IHRDL A N+L+ E+ KI+DFG+A+
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
L LG+G FG V G KD ++AVK L S A+ + L + ++E+ ++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
+H+N++ LLG C + +I EY +L L ++P +E+L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ ++RG+ YL + + IHRDL A N+L+ E+ KI+DFG+A+
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
L LG+G FG V G KD ++AVK L S A+ + L + ++E+ ++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
+H+N++ LLG C + +I EY +L L ++P +E+L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ ++RG+ YL + + IHRDL A N+L+ E+ KI+DFG+A+
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
L LG+G FG V G KD ++AVK L S A+ + L + ++E+ ++ +
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
+H+N++ LLG C + +I EY +L L ++P +E+L +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ ++RG+ YL + + IHRDL A N+L+ E+ KI+DFG+A+
Sbjct: 137 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 36/203 (17%)
Query: 457 ATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPV-----YWGRLKDG-QEIAV 510
+ +V+ K+ + P ++F N L LG+G FG V + + + G +AV
Sbjct: 4 SLSVDAFKILEDPKWEF-----PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAV 58
Query: 511 KRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF 569
K L + AS L + ++E V+ ++ H ++++L G C + +LI EY SL L
Sbjct: 59 KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR 118
Query: 570 DPLK-------------KERLDWRKRFNIIEG--------ISRGLLYLHRDSRLRIIHRD 608
+ K LD + G IS+G+ YL + + ++HRD
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRD 175
Query: 609 LKASNILLDEELNPKISDFGMAK 631
L A NIL+ E KISDFG+++
Sbjct: 176 LAARNILVAEGRKMKISDFGLSR 198
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 483 FQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLV 540
++L +G GGF V + G+ +A+K + K + G L E+ + L+H+++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRD 599
+L + ++ EY P L FD + ++RL + + I + Y+H
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGEL----FDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ 127
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
HRDLK N+L DE K+ DFG+ GN+D
Sbjct: 128 G---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFM-NEVMVISKLQHRNLV 540
F+ LG G F V K G+ AVK + K + +G E + NE+ V+ K++H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN-IIEGISRGLLYLHRD 599
L L+ + + LFD + ++ K + +I + + YLHR
Sbjct: 84 ALEDIYESPNHLYLVMQLVSG----GELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR- 138
Query: 600 SRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
+ I+HRDLK N+L DEE ISDFG++K+ G
Sbjct: 139 --MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG 174
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-----EVMVISKLQHRNLVRL 542
LG+G F VY R K+ Q +A+K++ ++ +N E+ ++ +L H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
L L++++M L+ ++ D K + ++ +GL YLH+
Sbjct: 78 LDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQHW-- 132
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
I+HRDLK +N+LLDE K++DFG+AK FG
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ +L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K+ D K F
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 149 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 205
Query: 639 QADTG 643
G
Sbjct: 206 YVRKG 210
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ +L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K D K F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 639 QADTG 643
G
Sbjct: 204 XVRKG 208
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 19 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I Y +L L
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
E KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
P F +ELA +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
+ E+ ++ ++H N++ LL + Y+ + A L + +K +L
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDD 121
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ + D
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 174
Query: 641 DTGRV 645
TG V
Sbjct: 175 MTGYV 179
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ +L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K D K F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 639 QADTG 643
G
Sbjct: 195 XVRKG 199
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ +L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K D K F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 639 QADTG 643
G
Sbjct: 195 XVRKG 199
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 23 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 82
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 83 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 195
Query: 638 DQADTGRVV 646
D TG V
Sbjct: 196 DDEMTGYVA 204
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 22 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 81
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 82 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 142 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 194
Query: 638 DQADTGRVV 646
D TG V
Sbjct: 195 DDEMTGYVA 203
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+G+G G V ++ G+ +AVK++ Q E NEV+++ QH N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ E++ +L D + R++ + + + + L LH +IH
Sbjct: 87 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 607 RDLKASNILLDEELNPKISDFG 628
RD+K+ +ILL + K+SDFG
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFG 161
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ +L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K D K F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 639 QADTG 643
G
Sbjct: 204 XVRKG 208
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+G+G G V ++ G+ +AVK++ Q E NEV+++ QH N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ E++ +L D + R++ + + + + L LH +IH
Sbjct: 91 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 607 RDLKASNILLDEELNPKISDFG 628
RD+K+ +ILL + K+SDFG
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFG 165
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVIS 532
A ++ ++ LG+G FG V + K GQE AVK +SK E + EV ++
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
+L H N+ +L E+K Y + L + + ++R II + G
Sbjct: 82 QLDHPNIXKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 593 LLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIFGGNQDQAD 641
+ Y H++ +I+HRDLK N+LL+ ++ N +I DFG++ F ++ D
Sbjct: 139 ITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKD 187
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 9 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 68
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 69 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 181
Query: 638 DQADTGRVV 646
D TG V
Sbjct: 182 DDEMTGYVA 190
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 23 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 82
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 83 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LSK S
Sbjct: 15 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSI 74
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 75 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 187
Query: 638 DQADTGRVV 646
D TG V
Sbjct: 188 DDEMTGYVA 196
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ +L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K D K F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 639 QADTG 643
G
Sbjct: 204 YVRKG 208
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ +L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K E D K F
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE--DLYKDFLT 146
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 147 LEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 639 QADTG 643
G
Sbjct: 204 XVRKG 208
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
V+ +L + P ++F + L LG+G FG V + K+ +AVK
Sbjct: 19 VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
L A+ + L + ++E+ ++ + +H+N++ LLG C + +I Y +L L
Sbjct: 74 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + +E++ ++ + ++RG+ YL + + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
E KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ +L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K D K F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 639 QADTG 643
G
Sbjct: 195 YVRKG 199
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ +L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K D K F
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 639 QADTG 643
G
Sbjct: 195 YVRKG 199
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+G+G G V ++ G+ +AVK++ Q E NEV+++ QH N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ E++ +L D + R++ + + + + L LH +IH
Sbjct: 98 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 607 RDLKASNILLDEELNPKISDFG 628
RD+K+ +ILL + K+SDFG
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFG 172
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 8/146 (5%)
Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGC 545
KLG+G + VY G+ K +A+K + +G + EV ++ L+H N+V L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRII 605
+ L++EY+ ++ L L D + K F + + RGL Y HR +++
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLF--LFQLLRGLAYCHRQ---KVL 122
Query: 606 HRDLKASNILLDEELNPKISDFGMAK 631
HRDLK N+L++E K++DFG+A+
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLAR 148
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ +L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K D K F
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 184 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 240
Query: 639 QADTG 643
G
Sbjct: 241 YVRKG 245
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+G+G G V ++ G+ +AVK++ Q E NEV+++ QH N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ E++ +L D + R++ + + + + L LH +IH
Sbjct: 96 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 607 RDLKASNILLDEELNPKISDFG 628
RD+K+ +ILL + K+SDFG
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFG 170
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 68 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HT 180
Query: 638 DQADTGRV 645
D TG V
Sbjct: 181 DDEMTGYV 188
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGXV 183
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 11/168 (6%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
F K+G+G FG V+ G Q++ A+K + + + +E+ E+ V+S+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+ G ++ + +I EY+ S D L+ LD + I+ I +GL YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
+ IHRD+KA+N+LL E K++DFG+A Q + +T VGT
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGT 187
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 68 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HT 180
Query: 638 DQADTGRV 645
D TG V
Sbjct: 181 DDEMTGYV 188
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q + +G G +G V K G +AVK+LS+ S
Sbjct: 13 QERPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 72
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 73 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 132
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 133 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 185
Query: 638 DQADTGRV 645
D TG V
Sbjct: 186 DDEMTGYV 193
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 68 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 180
Query: 638 DQADTGRV 645
D TG V
Sbjct: 181 DDEMTGYV 188
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFM--NEVMVIS 532
+ + ++++ +G G +G R K DG+ + K L S E+ M +EV ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 533 KLQHRNLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGI 589
+L+H N+VR ++ L + EY L +++ K ++ LD ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 590 SRGLLYLHR--DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
+ L HR D ++HRDLK +N+ LD + N K+ DFG+A+I ++D A VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK--EFVG 178
Query: 648 T 648
T
Sbjct: 179 T 179
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 5 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 65 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 177
Query: 638 DQADTGRV 645
D TG V
Sbjct: 178 DDEMTGYV 185
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ + D
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 174
Query: 641 DTGRV 645
TG V
Sbjct: 175 MTGYV 179
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 11/168 (6%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
F K+G+G FG V+ G Q++ A+K + + + +E+ E+ V+S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+ G ++ + +I EY+ S D L+ LD + I+ I +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
+ IHRD+KA+N+LL E K++DFG+A Q + +T VGT
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGT 167
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 5 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 65 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 177
Query: 638 DQADTGRV 645
D TG V
Sbjct: 178 DDEMTGYV 185
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 15 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 74
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 75 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 187
Query: 638 DQADTGRVV 646
D TG V
Sbjct: 188 DDEMTGYVA 196
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 15 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 74
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 75 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 187
Query: 638 DQADTGRVV 646
D TG V
Sbjct: 188 DDEMTGYVA 196
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 23 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 82
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 83 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 195
Query: 638 DQADTGRV 645
D TG V
Sbjct: 196 DDEMTGYV 203
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 68 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 180
Query: 638 DQADTGRV 645
D TG V
Sbjct: 181 DDEMTGYV 188
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 2 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 61
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 62 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 121
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 122 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 174
Query: 638 DQADTGRV 645
D TG V
Sbjct: 175 DDEMTGYV 182
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 14 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 73
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 74 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 134 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HT 186
Query: 638 DQADTGRV 645
D TG V
Sbjct: 187 DDEMTGYV 194
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 22 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 81
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 82 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 142 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 194
Query: 638 DQADTGRV 645
D TG V
Sbjct: 195 DDEMTGYV 202
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 70 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 182
Query: 638 DQADTGRV 645
D TG V
Sbjct: 183 DDEMTGYV 190
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 5 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 65 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 177
Query: 638 DQADTGRV 645
D TG V
Sbjct: 178 DDEMTGYV 185
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFM--NEVMVIS 532
+ + ++++ +G G +G R K DG+ + K L S E+ M +EV ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 533 KLQHRNLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGI 589
+L+H N+VR ++ L + EY L +++ K ++ LD ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 590 SRGLLYLHR--DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
+ L HR D ++HRDLK +N+ LD + N K+ DFG+A+I N D + VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVG 178
Query: 648 T 648
T
Sbjct: 179 T 179
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 14 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 73
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 74 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 134 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 186
Query: 638 DQADTGRV 645
D TG V
Sbjct: 187 DDEMTGYV 194
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 26 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 85
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 86 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 146 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 198
Query: 638 DQADTGRV 645
D TG V
Sbjct: 199 DDEMTGYV 206
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 9 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 68
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 69 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 181
Query: 638 DQADTGRV 645
D TG V
Sbjct: 182 DDEMTGYV 189
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFM--NEVMVIS 532
+ + ++++ +G G +G R K DG+ + K L S E+ M +EV ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 533 KLQHRNLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGI 589
+L+H N+VR ++ L + EY L +++ K ++ LD ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 590 SRGLLYLHR--DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
+ L HR D ++HRDLK +N+ LD + N K+ DFG+A+I N D + VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVG 178
Query: 648 T 648
T
Sbjct: 179 T 179
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQH 536
T Q+ ++G+G +G V+ G+ + G+++AVK + E E+ ++H
Sbjct: 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRH 90
Query: 537 RNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
N++ + ++G + LI +Y N SL +D LK LD + + G
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLKLAYSSVSG 146
Query: 593 LLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
L +LH + + I HRDLK+ NIL+ + I+D G+A F + ++ D
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVD 200
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 70 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 9 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 68
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 69 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 181
Query: 638 DQADTGRV 645
D TG V
Sbjct: 182 DDEMTGYV 189
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 26 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 85
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 86 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+
Sbjct: 146 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 70 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+G+G G V ++ G+ +AVK++ Q E NEV+++ QH N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ E++ +L D + R++ + + + + L LH +IH
Sbjct: 141 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 607 RDLKASNILLDEELNPKISDFG 628
RD+K+ +ILL + K+SDFG
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFG 215
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL----- 542
LG GG G V+ D + +A+K++ Q ++ + E+ +I +L H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 543 ---------LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
+G E ++ EYM + L PL L+ R + + + RGL
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPL----LEEHARLFMYQ-LLRGL 133
Query: 594 LYLHRDSRLRIIHRDLKASNILLD-EELNPKISDFGMAKIF 633
Y+H + ++HRDLK +N+ ++ E+L KI DFG+A+I
Sbjct: 134 KYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
K+G+G G V ++ G+ +AVK++ Q E NEV+++ QH N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
+ G+E ++ E++ L D + R++ + + + + L LH +IH
Sbjct: 218 LVGDELWVVMEFLEG----GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 607 RDLKASNILLDEELNPKISDFG 628
RD+K+ +ILL + K+SDFG
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFG 292
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 70 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 19/171 (11%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFM-----NEVMV 530
+ AT+ ++ +++G G +G VY R G +A+K + +G G + EV +
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 531 ISKLQ---HRNLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKR 582
+ +L+ H N+VRL+ C + L++E++ ++ L L D L
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETI 122
Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
+++ RGL +LH + I+HRDLK NIL+ K++DFG+A+I+
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 170
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 36/178 (20%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+F+ +G GGFG V+ + + DG+ ++R+ + E+ EV ++KL H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIV 68
Query: 541 RLLGC-------CVEGEEKMLIYEYMP------NRSLDALLF---------------DPL 572
GC ++ + +Y P +RS LF +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 573 KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
+ E+LD + E I++G+ Y+H ++IHRDLK SNI L + KI DFG+
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 5 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 65 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR----HT 177
Query: 638 DQADTGRV 645
D TG V
Sbjct: 178 DDEMTGYV 185
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 9 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 68
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 69 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ +
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR----HT 181
Query: 638 DQADTGRV 645
D TG V
Sbjct: 182 DDEMTGYV 189
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGL-EEFMNEVMVISKLQHRNL 539
++ K+G+G +G V+ + ++ EI A+KR+ +G+ + E+ ++ +L+H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
VRL ++ L++E+ ++ L FD + LD + + + +GL + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGD-LDPEIVKSFLFQLLKGLGFCH-- 118
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
SR ++HRDLK N+L++ K++DFG+A+ FG
Sbjct: 119 SR-NVLHRDLKPQNLLINRNGELKLADFGLARAFG 152
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 4 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 63
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 64 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 123
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ + D
Sbjct: 124 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 176
Query: 641 DTGRV 645
TG V
Sbjct: 177 MTGYV 181
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ + D
Sbjct: 123 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 175
Query: 641 DTGRV 645
TG V
Sbjct: 176 MTGYV 180
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ + D
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 174
Query: 641 DTGRV 645
TG V
Sbjct: 175 MTGYV 179
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE--FMNEVMVISKLQHR 537
++ K+G+G +G V+ R +D GQ +A+K+ ++ + + + E+ ++ +L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS----RGL 593
NLV LL L++EY + L L +R ++++ I+ + +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHEL-------DRYQRGVPEHLVKSITWQTLQAV 115
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
+ H+ + IHRD+K NIL+ + K+ DFG A++ G D D
Sbjct: 116 NFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI D+G+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
F K+G+G FG V+ G Q++ A+K + + + +E+ E+ V+S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+ G ++ + +I EY+ S D L+ LD + I+ I +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMA 630
+ IHRD+KA+N+LL E K++DFG+A
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+ + +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
S +G+G +G V + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + Y+ + A L+ LK + L + I RGL Y+H + +
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 165
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 166 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 201
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
F K+G+G FG V+ G Q++ A+K + + + +E+ E+ V+S+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+ G ++ + +I EY+ S D L+ LD + I+ I +GL YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMA 630
+ IHRD+KA+N+LL E K++DFG+A
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 26/185 (14%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K D K F
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPE-DLYKDFLT 146
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 639 QADTG 643
G
Sbjct: 204 XVRKG 208
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DFG+A+ + D
Sbjct: 123 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 175
Query: 641 DTGRV 645
TG V
Sbjct: 176 MTGYV 180
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 37/172 (21%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+F+ +G GGFG V+ + + DG+ +KR+ + E+ EV ++KL H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIV 67
Query: 541 RLLGCCVEGEEKMLIYEYMP-------NRSLDALLF---------------DPLKKERLD 578
GC +G ++Y P +RS LF + + E+LD
Sbjct: 68 HYNGCW-DG------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
+ E I++G+ Y+H ++I+RDLK SNI L + KI DFG+
Sbjct: 121 KVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLV 169
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 20/174 (11%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK-----RLSKAS-GQGLEEFMNEVM 529
+ +++++ +LG G F V R K G+E A K RLS + G EE EV
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEG 588
++ +++H N++ L + +LI E + LFD L +KE L + ++
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSG----GELFDFLAEKESLTEDEATQFLKQ 116
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNI-LLDEEL-NPKIS--DFGMA-KIFGGNQ 637
I G+ YLH RI H DLK NI LLD+ + NP+I DFG+A KI GN+
Sbjct: 117 ILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 167
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 20/170 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK-----RLSKAS-GQGLEEFMNEVMVISK 533
+++++ +LG G F V R K G+E A K RLS + G EE EV ++ +
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRG 592
++H N++ L + +LI E + LFD L +KE L + ++ I G
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSG----GELFDFLAEKESLTEDEATQFLKQILDG 127
Query: 593 LLYLHRDSRLRIIHRDLKASNI-LLDEEL-NPKIS--DFGMA-KIFGGNQ 637
+ YLH RI H DLK NI LLD+ + NP+I DFG+A KI GN+
Sbjct: 128 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 174
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASG-QGLEEFMNEVMVISKL 534
+T+ + + LS LGQG V+ GR K G A+K + S + ++ M E V+ KL
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64
Query: 535 QHRNLVRLLGCCVE--GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
H+N+V+L E K+LI E+ P SL +L +P L + ++ + G
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 593 LLYLHRDSRLRIIHRDLKASNILL----DEELNPKISDFGMAK 631
+ +L + I+HR++K NI+ D + K++DFG A+
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 31/178 (17%)
Query: 482 NFQLSSKLGQGGFGPVY----WGRLKDGQ--EIAVKRL-SKASGQGLEEFMNEVMVISKL 534
N + LG G FG V +G K G ++AVK L KA E M+E+ ++++L
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 535 -QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK-----------ERLDWRKR 582
H N+V LLG C LI+EY L L +K +RL+ +
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 583 FNIIE---------GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
N++ +++G+ +L S +HRDL A N+L+ KI DFG+A+
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 25/197 (12%)
Query: 446 AKRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-D 504
A+ A ++A N+ +K + F+ + +++ +G G +G V R +
Sbjct: 25 AEPAHTAASVAAKNLALLKARS-----FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLT 79
Query: 505 GQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVR----LLGCCVEGEEK--MLIY 556
GQ++A+K++ A + + E+ ++ +H N++ L GE K ++
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 139
Query: 557 EYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
+ M L ++ PL E + + + + RGL Y+H ++IHRDLK SN+
Sbjct: 140 DLM-ESDLHQIIHSSQPLTLEHVRY-----FLYQLLRGLKYMHS---AQVIHRDLKPSNL 190
Query: 615 LLDEELNPKISDFGMAK 631
L++E KI DFGMA+
Sbjct: 191 LVNENCELKIGDFGMAR 207
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 16/159 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYW----GRLKDGQEIAVKRLSKASGQGLEEFMNEVM--VISKL 534
++F+L LGQG FG V+ R G A+K L KA+ + + ++ +++ +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRG 592
H +V+L + LI +++ R D LF L KE + + +F + E ++ G
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFL--RGGD--LFTRLSKEVMFTEEDVKFYLAE-LALG 142
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
L +LH L II+RDLK NILLDEE + K++DFG++K
Sbjct: 143 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 178
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI DF +A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
LG+GGF + D +E+ ++ S E+ E+ + L H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ E RSL L +K + R+ + I G YLHR+ R+
Sbjct: 89 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 142
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK N+ L+E+L KI DFG+A
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
LG+GGF + D +E+ ++ S E+ E+ + L H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ E RSL L +K + R+ + I G YLHR+ R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 160
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK N+ L+E+L KI DFG+A
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
LG+GGF + D +E+ ++ S E+ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ E RSL L +K + R+ + I G YLHR+ R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 138
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK N+ L+E+L KI DFG+A
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHR 537
NF++ K+G+G F VY L DG +A+K++ + + + E+ ++ +L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLLYL 596
N+++ +E E ++ E L ++ K++RL R + + L ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
H SR R++HRD+K +N+ + K+ D G+ + F A + +VGT
Sbjct: 153 H--SR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGT 199
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASG-QGLEEFMNEVMVISKL 534
+T+ + + LS LGQG V+ GR K G A+K + S + ++ M E V+ KL
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64
Query: 535 QHRNLVRLLGCCVE--GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
H+N+V+L E K+LI E+ P SL +L +P L + ++ + G
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 593 LLYLHRDSRLRIIHRDLKASNILL----DEELNPKISDFGMAK 631
+ +L + I+HR++K NI+ D + K++DFG A+
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
LG+GGF + D +E+ ++ S E+ E+ + L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ E RSL L +K + R+ + I G YLHR+ R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 138
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK N+ L+E+L KI DFG+A
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
LG+GGF + D +E+ ++ S E+ E+ + L H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ E RSL L +K + R+ + I G YLHR+ R+
Sbjct: 83 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 136
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK N+ L+E+L KI DFG+A
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 34 SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 149
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 35 SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 93
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 150
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 187
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 26 SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 84
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 141
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 178
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
LG+GGF + D +E+ ++ S E+ E+ + L H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ E RSL L +K + R+ + I G YLHR+ R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 162
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK N+ L+E+L KI DFG+A
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 27 SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 142
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 483 FQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLS--KASGQGLEEFMNEVMVISKLQHRNL 539
+QL +LG+G F V ++ GQE A K ++ K S + ++ E + L+H N+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
VRL E LI++ + L D + +E + I+ I +L+ H+
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTG---GELFEDIVAREYYSEADASHCIQQILEAVLHCHQ- 139
Query: 600 SRLRIIHRDLKASNILLDEELN---PKISDFGMAKIFGGNQ 637
+ ++HRDLK N+LL +L K++DFG+A G Q
Sbjct: 140 --MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 178
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 20/174 (11%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK----ASGQGL--EEFMNEVM 529
+ +++++ +LG G F V R K G+E A K + K +S +G+ EE EV
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEG 588
++ +++H N++ L + +LI E + LFD L +KE L + ++
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSG----GELFDFLAEKESLTEDEATQFLKQ 137
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNI-LLDEEL-NPKIS--DFGMA-KIFGGNQ 637
I G+ YLH RI H DLK NI LLD+ + NP+I DFG+A KI GN+
Sbjct: 138 ILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 188
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 480 TNNFQLSSKLGQGGFGPVYWG-RLKDGQEIA-----VKRLSKASGQGLEEFMNEVMVISK 533
T +QL +LG+G F V ++ GQE A K+LS Q LE E +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRL 66
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
L+H N+VRL E LI++ + L D + +E + I+ I +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTG---GELFEDIVAREYYSEADASHCIQQILEAV 123
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGMAKIFGGNQ 637
L+ H+ + ++HR+LK N+LL +L K++DFG+A G Q
Sbjct: 124 LHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 27 SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 142
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 34 SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 149
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 25/197 (12%)
Query: 446 AKRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-D 504
A+ A ++A N+ +K + F+ + +++ +G G +G V R +
Sbjct: 24 AEPAHTAASVAAKNLALLKARS-----FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLT 78
Query: 505 GQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVR----LLGCCVEGEEK--MLIY 556
GQ++A+K++ A + + E+ ++ +H N++ L GE K ++
Sbjct: 79 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138
Query: 557 EYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
+ M L ++ PL E + + + + RGL Y+H ++IHRDLK SN+
Sbjct: 139 DLM-ESDLHQIIHSSQPLTLEHVRY-----FLYQLLRGLKYMHS---AQVIHRDLKPSNL 189
Query: 615 LLDEELNPKISDFGMAK 631
L++E KI DFGMA+
Sbjct: 190 LVNENCELKIGDFGMAR 206
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
S +G+G +G V + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + Y+ ++ L+ LK + L + I RGL Y+H + +
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
S +G+G +G V + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + Y+ ++ L+ LK + L + I RGL Y+H + +
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 29/185 (15%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K D K F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK----DLYKDFLT 142
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+E +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 143 LEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 639 QADTG 643
G
Sbjct: 200 YVRKG 204
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 21/181 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
+ L LG+G FG V + + +AVK L + A+ M+E+ ++
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
+ H N+V LLG C + G M+I E+ +L L F P K D+ ++
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 586 IE---GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
I +++G+ +L + + IHRDL A NILL E+ KI DFG+A+ + D
Sbjct: 147 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 643 G 643
G
Sbjct: 204 G 204
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
S +G+G +G V + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + Y+ ++ L+ LK + L + I RGL Y+H + +
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 147
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 148 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 489 LGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLGC 545
+G+G +G V + ++ + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTR-VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDI 109
Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRII 605
+ + Y+ ++ L+ LK ++L + I RGL Y+H + ++
Sbjct: 110 LRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN---VL 166
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
HRDLK SN+L++ + KI DFG+A+I D
Sbjct: 167 HRDLKPSNLLINTTCDLKICDFGLARIADPEHDHT 201
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
S +G+G +G V + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + Y+ ++ L+ LK + L + I RGL Y+H + +
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQ-EIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNL 539
+Q KLG G +G V R K E A+K R + S + + EV V+ L H N+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 540 VRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFN------IIEGISRG 592
++L + L+ E Y D ++ R +FN II+ + G
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIH----------RMKFNEVDAAVIIKQVLSG 148
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIFGGNQDQADTGRVVGT 648
+ YLH+ + I+HRDLK N+LL+ + KI DFG++ +F ++Q +GT
Sbjct: 149 VTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGT 201
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 21/162 (12%)
Query: 485 LSSKLGQGGFGPVYWGRLKD----GQ----EIAVKRLSKASGQGLEEFMNEVMVISKLQH 536
+ LGQG F ++ G ++ GQ E+ +K L KA E F ++SKL H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
++LV G CV G+E +L+ E++ SLD L + W + + + ++ + +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFL 129
Query: 597 HRDSRLRIIHRDLKASNILLDEEL-----NP---KISDFGMA 630
++ +IH ++ A NILL E NP K+SD G++
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
S +G+G +G V + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + Y+ ++ L+ LK + L + I RGL Y+H + +
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 146 LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT 181
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
S +G+G +G V + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + Y+ ++ L+ LK + L + I RGL Y+H + +
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 165
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 166 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 201
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGL-EEFMNEVMVISKLQHRNL 539
++ K+G+G +G V+ + ++ EI A+KR+ +G+ + E+ ++ +L+H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
VRL ++ L++E+ ++ L FD + LD + + + +GL + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGD-LDPEIVKSFLFQLLKGLGFCH-- 118
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
SR ++HRDLK N+L++ K+++FG+A+ FG
Sbjct: 119 SR-NVLHRDLKPQNLLINRNGELKLANFGLARAFG 152
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
S +G+G +G V + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 37 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + Y+ ++ L+ LK + L + I RGL Y+H + +
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 153
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 154 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 189
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
S +G+G +G V + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + Y+ ++ L+ LK + L + I RGL Y+H + +
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 487 SKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRNLVRLL 543
+ +G G +G V + G+++A+K+LS+ + + E++++ +QH N++ LL
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 544 GCCVEGEEKMLIYEY---MP--NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
Y++ MP L ++ +E++ + ++ + +GL Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHS 162
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
++HRDLK N+ ++E+ KI DFG+A+ + D TG VV
Sbjct: 163 AG---VVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVV 203
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 479 ATNNFQLSSK---LGQGGFGPVY-WGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL 534
A N+F SK LG G FG V+ G ++A K + + EE NE+ V+++L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII--EGISRG 592
H NL++L + +L+ EY+ LFD + E + + I+ + I G
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDG----GELFDRIIDESYNLTELDTILFMKQICEG 199
Query: 593 LLYLHRDSRLRIIHRDLKASNILL--DEELNPKISDFGMAKIF 633
+ ++H ++ I+H DLK NIL + KI DFG+A+ +
Sbjct: 200 IRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
++ +G+G FG V + + +++A+K++ S + + F+ E+ +S++ H N+V
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 65
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+L G C+ L+ EY SL +L + S+G+ YLH
Sbjct: 66 KLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMA 630
+IHRDLK N+LL KI DFG A
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG-QEIAVKRLSKASGQGLE--EFMNEVMVISKLQHR 537
+N+++ +G+G +G VY K+ + +A+K++++ ++ + E+ ++++L+
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 538 NLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
++RL + + +++ I + + L L P+ L + I+ + G
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEQHVKTILYNLLLGE 144
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
++H IIHRDLK +N LL+++ + KI DFG+A+ ++D
Sbjct: 145 KFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKD 186
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 489 LGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLL 543
+G G +G V Y RL+ Q++AVK+LS+ S E+ ++ L+H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 544 GCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
E Y+ + A L + +K + L ++ + RGL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG-- 151
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
IIHRDLK SN+ ++E+ +I DFG+A+ D+ TG V
Sbjct: 152 -IIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVA 190
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 487 SKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRNLVRLL 543
+ +G G +G V + G+++A+K+LS+ + + E++++ +QH N++ LL
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 544 GCCVEGEEKMLIYEY---MP--NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
Y++ MP L ++ +E++ + ++ + +GL Y+H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHS 144
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
++HRDLK N+ ++E+ KI DFG+A+ + D TG VV
Sbjct: 145 AG---VVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVV 185
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI FG+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI--AVKRLSKAS---GQGLEEFMNEVMVISK-L 534
++F +G+G FG V R K +E+ AVK L K + + + M+E V+ K +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHK-AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRG 592
+H LV L ++ + +Y+ L F L++ER L+ R RF E I+
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGEL----FYHLQRERCFLEPRARFYAAE-IASA 151
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
L YLH L I++RDLK NILLD + + ++DFG+ K
Sbjct: 152 LGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK 187
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A+K++S Q + + E+ ++ + +H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
++ +G+G FG V + + +++A+K++ S + + F+ E+ +S++ H N+V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
+L G C+ L+ EY SL +L + S+G+ YLH
Sbjct: 65 KLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMA 630
+IHRDLK N+LL KI DFG A
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
S +G+G +G V + L + +A++++S Q + + E+ ++ + +H N++ +
Sbjct: 33 SYIGEGAYGMVCSAYDNL-NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
+ + Y+ ++ L+ LK + L + I RGL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
++HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI D G+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLS--KASGQGLEEFMNEVMVISKL 534
+ T+ +QL +G+G F V +L G E A K ++ K S + ++ E + L
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N+VRL E L+++ + L D + +E + I+ I +L
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTG---GELFEDIVAREYYSEADASHCIQQILEAVL 117
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGMAKIFGGNQ 637
+ H+ + ++HRDLK N+LL + K++DFG+A G+Q
Sbjct: 118 HCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ 160
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
S +G+G +G V + +A+K++S Q + + E+ ++ +H N++ +
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + Y+ ++ L+ LK + L + I RGL Y+H + +
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 147
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 148 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 521 LEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
+E+ E+ ++ KL H N+V+L+ + E L Y + ++ P K + +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHL-YMVFELVNQGPVMEVPTLKPLSEDQ 138
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
RF + + +G+ YLH +IIHRD+K SN+L+ E+ + KI+DFG++ F G+ A
Sbjct: 139 ARF-YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS--DA 192
Query: 641 DTGRVVGT 648
VGT
Sbjct: 193 LLSNTVGT 200
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + LFD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + LFD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + LFD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 489 LGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLL 543
+G G +G V Y RL+ Q++AVK+LS+ S E+ ++ L+H N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 544 GCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
E Y+ + A L + +K + L ++ + RGL Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-- 143
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
IIHRDLK SN+ ++E+ +I DFG+A+ D+ TG V
Sbjct: 144 -IIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVA 182
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + LFD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + LFD L +KE L + ++ I G+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 127
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSK---ASGQGLEEFMNEVMV 530
++ +F+L LG+G FG V+ K Q A+K L K +E M E V
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 531 ISKLQHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+S + + C + +E + + EY+ L ++ + D + I
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEI 128
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
GL +LH I++RDLK NILLD++ + KI+DFGM K
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 32/207 (15%)
Query: 450 EVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVY----WGRLKD- 504
+V+ +++ N + LP E N LG G FG V +G +K
Sbjct: 10 KVVEEINGNNXVXIDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSD 67
Query: 505 -GQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEY--- 558
+AVK L ++ E M+E+ V+S L H N+V LLG C G ++I EY
Sbjct: 68 AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 127
Query: 559 --------------MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ +++ A++ D L+ F+ +++G+ +L +
Sbjct: 128 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY--QVAKGMAFLASKN---C 182
Query: 605 IHRDLKASNILLDEELNPKISDFGMAK 631
IHRDL A NILL KI DFG+A+
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLAR 209
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + LFD L +KE L + ++ I G+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 127
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI D G+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + LFD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
Q+ P F +EL +Q S +G G +G V K G +AVK+LS+ S
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
+ E+ ++ ++H N++ LL + Y+ + A L + +K ++L
Sbjct: 63 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
+I I RGL Y+H IIHRDLK SN+ ++E+ KI D G+A+ +
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR----HT 175
Query: 638 DQADTGRV 645
D TG V
Sbjct: 176 DDEMTGYV 183
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 30/176 (17%)
Query: 481 NNFQLSSKLGQGGFGPVY----WGRLKD--GQEIAVKRLSKASG-QGLEEFMNEVMVISK 533
N LG G FG V +G +K +AVK L ++ E M+E+ V+S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEY-----------------MPNRSLDALLFDPLKKE 575
L H N+V LLG C G ++I EY + +++ A++ D
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 576 RLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
L+ F+ +++G+ +L + IHRDL A NILL KI DFG+A+
Sbjct: 143 DLEDLLSFSY--QVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR 193
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
T + L +G+G +G V+ G + G+ +AVK S + E N VM L
Sbjct: 5 TVAHQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----L 59
Query: 535 QHRNLVRLLGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+H N++ + + LI Y SL +D L+ LD I+ I+
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIA 115
Query: 591 RGLLYLH-----RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
GL +LH + I HRDLK+ NIL+ + I+D G+A + + +Q D G
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + LFD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + L FD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 32/207 (15%)
Query: 450 EVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVY----WGRLKD- 504
+V+ +++ N + LP E N LG G FG V +G +K
Sbjct: 17 KVVEEINGNNYVYIDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSD 74
Query: 505 -GQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEY--- 558
+AVK L ++ E M+E+ V+S L H N+V LLG C G ++I EY
Sbjct: 75 AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 134
Query: 559 --------------MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ +++ A++ D L+ F+ +++G+ +L +
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY--QVAKGMAFLASKN---C 189
Query: 605 IHRDLKASNILLDEELNPKISDFGMAK 631
IHRDL A NILL KI DFG+A+
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEE---FMNEVMVISKLQ 535
++ +Q KLG G +G V + K G E A+K + K+S ++EV V+ +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 536 HRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
H N+++L + L+ E Y D ++ +++ I++ + G
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL----RQKFSEVDAAVIMKQVLSGTT 135
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIF 633
YLH+ + I+HRDLK N+LL+ + KI DFG++ F
Sbjct: 136 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 174
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGR-----LKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R L+ + KR +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + L FD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + LFD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 451 VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSK---LGQGGFGPVYWGRLKDGQE 507
IAK SA V + PL + ++ + + LG+GGF Y D +E
Sbjct: 9 AIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKE 68
Query: 508 IAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRS 563
+ ++ S E+ E+ + L + ++V G + + ++ E RS
Sbjct: 69 VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 564 LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPK 623
L L +K + R+ + + I +G+ YLH + R+IHRDLK N+ L+++++ K
Sbjct: 129 L--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVK 182
Query: 624 ISDFGMA 630
I DFG+A
Sbjct: 183 IGDFGLA 189
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
T + L +G+G +G V+ G + G+ +AVK S + E N VM L
Sbjct: 5 TVARDITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----L 59
Query: 535 QHRNLVRLLGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+H N++ + + LI Y SL +D L+ LD I+ I+
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIA 115
Query: 591 RGLLYLH-----RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
GL +LH + I HRDLK+ NIL+ + I+D G+A + + +Q D G
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 32/207 (15%)
Query: 450 EVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVY----WGRLKD- 504
+V+ +++ N + LP E N LG G FG V +G +K
Sbjct: 17 KVVEEINGNNYVYIDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSD 74
Query: 505 -GQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEY--- 558
+AVK L ++ E M+E+ V+S L H N+V LLG C G ++I EY
Sbjct: 75 AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 134
Query: 559 --------------MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ +++ A++ D L+ F+ +++G+ +L +
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY--QVAKGMAFLASKN---C 189
Query: 605 IHRDLKASNILLDEELNPKISDFGMAK 631
IHRDL A NILL KI DFG+A+
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGR-----LKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R L+ + KR +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + L FD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 27/168 (16%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEE---FMNEVMVISKLQ 535
++ +Q KLG G +G V + K G E A+K + K+S ++EV V+ +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFN------IIEG 588
H N+++L + L+ E Y D ++ R++F+ I++
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL----------RQKFSEVDAAVIMKQ 112
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIF 633
+ G YLH+ + I+HRDLK N+LL+ + KI DFG++ F
Sbjct: 113 VLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 157
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 451 VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSK---LGQGGFGPVYWGRLKDGQE 507
IAK SA V + PL + ++ + + LG+GGF Y D +E
Sbjct: 9 AIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKE 68
Query: 508 IAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRS 563
+ ++ S E+ E+ + L + ++V G + + ++ E RS
Sbjct: 69 VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 564 LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPK 623
L L +K + R+ + + I +G+ YLH + R+IHRDLK N+ L+++++ K
Sbjct: 129 L--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVK 182
Query: 624 ISDFGMA 630
I DFG+A
Sbjct: 183 IGDFGLA 189
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 489 LGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLL 543
+G G +G V Y RL+ Q++AVK+LS+ S E+ ++ L+H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 544 GCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
E Y+ + A L + +K + L ++ + RGL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-- 151
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
IIHRDLK SN+ ++E+ +I DFG+A+ D+ TG V
Sbjct: 152 -IIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVA 190
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 451 VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSK---LGQGGFGPVYWGRLKDGQE 507
IAK SA V + PL + ++ + + LG+GGF Y D +E
Sbjct: 9 AIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKE 68
Query: 508 IAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRS 563
+ ++ S E+ E+ + L + ++V G + + ++ E RS
Sbjct: 69 VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 564 LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPK 623
L L +K + R+ + + I +G+ YLH + R+IHRDLK N+ L+++++ K
Sbjct: 129 L--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVK 182
Query: 624 ISDFGMA 630
I DFG+A
Sbjct: 183 IGDFGLA 189
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 32/207 (15%)
Query: 450 EVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVY----WGRLKD- 504
+V+ +++ N + LP E N LG G FG V +G +K
Sbjct: 12 KVVEEINGNNYVYIDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSD 69
Query: 505 -GQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEY--- 558
+AVK L ++ E M+E+ V+S L H N+V LLG C G ++I EY
Sbjct: 70 AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 129
Query: 559 --------------MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ +++ A++ D L+ F+ +++G+ +L +
Sbjct: 130 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY--QVAKGMAFLASKN---C 184
Query: 605 IHRDLKASNILLDEELNPKISDFGMAK 631
IHRDL A NILL KI DFG+A+
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLAR 211
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
S +G+G +G V + +A+K++S Q + + E+ ++ +H N++ +
Sbjct: 31 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + Y+ ++ L+ LK + L + I RGL Y+H + +
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 147
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+HRDLK SN+LL+ + KI DFG+A++ + D
Sbjct: 148 LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHT 183
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + LFD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLS--KASGQGLEEFMNEVMVISKLQH 536
++N+ + +LG+G F V K G E A K ++ K S + ++ E + KLQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
N+VRL E L+++ + L D + +E + I+ I + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGE---LFEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 597 HRDSRLRIIHRDLKASNILLDEELN---PKISDFGMA 630
H + I+HR+LK N+LL + K++DFG+A
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLS--KASGQGLEEFMNEVMVISKLQH 536
++N+ + +LG+G F V K G E A K ++ K S + ++ E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
N+VRL E L+++ + L D + +E + I+ I + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGE---LFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 597 HRDSRLRIIHRDLKASNILLDEELN---PKISDFGMA 630
H + I+HR+LK N+LL + K++DFG+A
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLS--KASGQGLEEFMNEVMVISKLQH 536
++N+ + +LG+G F V K G E A K ++ K S + ++ E + KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
N+VRL E L+++ + L D + +E + I+ I + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTG---GELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 597 HRDSRLRIIHRDLKASNILLDEELN---PKISDFGMA 630
H + I+HR+LK N+LL + K++DFG+A
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
T L +G+G +G V+ G + G+ +AVK S + E N VM L
Sbjct: 34 TVARQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----L 88
Query: 535 QHRNLVRLLGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+H N++ + + LI Y SL +D L+ LD I+ I+
Sbjct: 89 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIA 144
Query: 591 RGLLYLH-----RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
GL +LH + I HRDLK+ NIL+ + I+D G+A + + +Q D G
Sbjct: 145 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 202
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
+ +LG G F V R K G + A K R +K+S +G+ E+ EV ++ ++Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
H N++ L + +LI E + LFD L +KE L + ++ I G+
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
YLH L+I H DLK NI+L + P KI DFG+A KI GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 483 FQLSSKL-GQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNL 539
++L+S+L G+G + V L++G+E AVK + K +G EV + + Q ++N+
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNI 73
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
+ L+ + L++E + S+ A + K++ + R+ ++ ++ L +LH
Sbjct: 74 LELIEFFEDDTRFYLVFEKLQGGSILAHI---QKQKHFNEREASRVVRDVAAALDFLHTK 130
Query: 600 SRLRIIHRDLKASNILLD--EELNP-KISDFGMA 630
I HRDLK NIL + E+++P KI DF +
Sbjct: 131 G---IAHRDLKPENILCESPEKVSPVKICDFDLG 161
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLS--KASGQGLEEFMNEVMVISKLQH 536
++N+ + +LG+G F V K G E A K ++ K S + ++ E + KLQH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
N+VRL E L+++ + L D + +E + I+ I + Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTG---GELFEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 597 HRDSRLRIIHRDLKASNILLDEELN---PKISDFGMA 630
H + I+HR+LK N+LL + K++DFG+A
Sbjct: 145 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + F N E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 11/162 (6%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSK---ASGQGLEEFMNEVMV 530
++ +F L LG+G FG V+ K Q A+K L K +E M E V
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 531 ISKLQHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+S + + C + +E + + EY+ L ++ + D + I
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEI 127
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
GL +LH I++RDLK NILLD++ + KI+DFGM K
Sbjct: 128 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQ----EIAVKRLSK-ASGQGLEEFMNEVM 529
+ A + L+ LG+G FG VY G + + +AVK K + E+FM+E +
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 61
Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
++ L H ++V+L+G +E E +I E P L L K L I
Sbjct: 62 IMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQI 118
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ + YL + +HRD+ NIL+ K+ DFG+++
Sbjct: 119 CKAMAYL---ESINCVHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 110
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 168
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 169 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 199
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 18/159 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGR----LKDGQEIAVKRLSKA----SGQGLEEFMNEVMVISKL 534
F+L LG+GG+G V+ R G+ A+K L KA + + E ++ ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR--FNIIEGISRG 592
+H +V L+ G + LI EY+ L F L++E + F + E IS
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAE-ISMA 133
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
L +LH+ II+RDLK NI+L+ + + K++DFG+ K
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 478 TATNNFQLSSKLGQGGFGPVY-WGRLKDGQEIAVKRLS--KASGQGLEEFMNEVMVISKL 534
+ T+ +QL +LG+G F V ++ GQE A K ++ K S + ++ E + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N+VRL E L+++ + L D + +E + I+ I +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTG---GELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 595 YLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGMAKIFGGNQ 637
+ H + I+HRDLK N+LL + K++DFG+A G+Q
Sbjct: 118 HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQ----EIAVKRLSK-ASGQGLEEFMNEVM 529
+ A + L+ LG+G FG VY G + + +AVK K + E+FM+E +
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 65
Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
++ L H ++V+L+G +E E +I E P L L K L I
Sbjct: 66 IMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQI 122
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ + YL + +HRD+ NIL+ K+ DFG+++
Sbjct: 123 CKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRK 581
+E + E V+ +L + +VR++G C E E ML+ E L+ L + + +
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 470
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
++ +S G+ YL + +HRDL A N+LL + KISDFG++K +++
Sbjct: 471 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 18/159 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGR----LKDGQEIAVKRLSKA----SGQGLEEFMNEVMVISKL 534
F+L LG+GG+G V+ R G+ A+K L KA + + E ++ ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR--FNIIEGISRG 592
+H +V L+ G + LI EY+ L F L++E + F + E IS
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAE-ISMA 133
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
L +LH+ II+RDLK NI+L+ + + K++DFG+ K
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRL-LGC 545
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 546 CVEGEEKMLIY-----EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
GE+K ++Y +Y+P K+ L + + R L Y+H
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 478 TATNNFQLSSKLGQGGFGPVY-WGRLKDGQEIAVKRLS--KASGQGLEEFMNEVMVISKL 534
+ T+ +QL +LG+G F V ++ GQE A K ++ K S + ++ E + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
+H N+VRL E L+++ + L D + +E + I+ I +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTG---GELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 595 YLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGMAKIFGGNQ 637
+ H + I+HRDLK N+LL + K++DFG+A G+Q
Sbjct: 118 HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRK 581
+E + E V+ +L + +VR++G C E E ML+ E L+ L + + +
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 471
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
++ +S G+ YL + +HRDL A N+LL + KISDFG++K +++
Sbjct: 472 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 525
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQ----EIAVKRLSK-ASGQGLEEFMNEVM 529
+ A + L+ LG+G FG VY G + + +AVK K + E+FM+E +
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
++ L H ++V+L+G +E E +I E P L L K L I
Sbjct: 78 IMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQI 134
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ + YL + +HRD+ NIL+ K+ DFG+++
Sbjct: 135 CKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + F N E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 174
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 175 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 120
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 178
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 179 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 39/184 (21%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA----------------- 516
+E N++++ L QG F + KD + A+K+ K+
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKIS 82
Query: 517 SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL------------ 564
++F NE+ +I+ +++ + G +E +IYEYM N S+
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI 624
+ F P++ + II+ + Y+H + I HRD+K SNIL+D+ K+
Sbjct: 143 NYTCFIPIQVIKC-------IIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKL 193
Query: 625 SDFG 628
SDFG
Sbjct: 194 SDFG 197
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 118
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 176
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 177 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 161
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 219
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 220 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + F N E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 483 FQLSSKLGQGGFGPVY-WGRLKDGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLV 540
+++ +LG GGFG V W G+++A+K+ + S + E + E+ ++ KL H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN---------------I 585
+G +K+ PN D L E D RK N +
Sbjct: 77 SAREV-PDGLQKL-----APN---DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 127
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
+ IS L YLH + RIIHRDLK NI+L + L KI D G AK
Sbjct: 128 LSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 173
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI----AVKRLSKAS----GQGLEEFMNEVMVIS 532
NF+L LG G +G V+ R G + A+K L KA+ + E E V+
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 533 KLQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
++ + L + E K+ LI +Y+ L L ++ER + + I
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLS---QRERFTEHEVQIYVGEIVL 170
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
L +LH+ L II+RD+K NILLD + ++DFG++K F ++ +
Sbjct: 171 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 87
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 145
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 146 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLE--EFMNE 527
FQ + +N+ + +G+G +G VY K+ ++ +A+K++++ ++ + E
Sbjct: 16 FQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILRE 75
Query: 528 VMVISKLQHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDP--LKKERLDWRK 581
+ ++++L+ ++RL + + +++ I + + L L P L +E +
Sbjct: 76 ITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIK--- 132
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
I+ + G ++H IIHRDLK +N LL+++ + K+ DFG+A+ +D
Sbjct: 133 --TILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 174
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 175 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 483 FQLSSKLGQGGFGPVY-WGRLKDGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLV 540
+++ +LG GGFG V W G+++A+K+ + S + E + E+ ++ KL H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN---------------I 585
+G +K+ PN D L E D RK N +
Sbjct: 76 SAREV-PDGLQKL-----APN---DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
+ IS L YLH + RIIHRDLK NI+L + L KI D G AK
Sbjct: 127 LSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
+LG G FG V G + + + + ++A+ L +E + E V+ +L + +VR+
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+G C E E ML+ E L+ L + + + ++ +S G+ YL +
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 145
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+HRDL A N+LL + KISDFG++K +++
Sbjct: 146 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 180
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
+LG G FG V G + + + + ++A+ L +E + E V+ +L + +VR+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+G C E E ML+ E L+ L + + + ++ +S G+ YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 147
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+HRDL A N+LL + KISDFG++K +++
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
+LG G FG V G + + + + ++A+ L +E + E V+ +L + +VR+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+G C E E ML+ E L+ L + + + ++ +S G+ YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 147
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+HRDL A N+LL + KISDFG++K +++
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 485 LSSKLGQGGFGPVYWGRLKD----GQ----EIAVKRLSKASGQGLEEFMNEVMVISKLQH 536
+ LGQG F ++ G ++ GQ E+ +K L KA E F ++SKL H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
++LV G C G+E +L+ E++ SLD L + W + + + ++ + +L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFL 129
Query: 597 HRDSRLRIIHRDLKASNILLDEEL-----NP---KISDFGMA 630
++ +IH ++ A NILL E NP K+SD G++
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 473 FEELATAT---NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLS--KASGQGLEEFMN 526
F+ +AT T +++QL +LG+G F V K QE A K ++ K S + ++
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
E + L+H N+VRL E L+++ + L D + +E + I
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG---GELFEDIVAREYYSEADASHCI 136
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGMAKIFGGNQ 637
I + ++H+ I+HRDLK N+LL + K++DFG+A G Q
Sbjct: 137 HQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ 187
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
+LG G FG V G + + + + ++A+ L +E + E V+ +L + +VR+
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+G C E E ML+ E L+ L + + + ++ +S G+ YL +
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 127
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+HRDL A N+LL + KISDFG++K +++
Sbjct: 128 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 162
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG----QEIAVKRLSKASGQGLEEFMNEVM--VISKL 534
+ F+L LGQG FG V+ + G Q A+K L KA+ + + ++ ++ ++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRK--RFNIIEGISRG 592
H +V+L + LI +++ R D LF L KE + + +F + E ++
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFL--RGGD--LFTRLSKEVMFTEEDVKFYLAE-LALA 138
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
L +LH L II+RDLK NILLDEE + K++DFG++K
Sbjct: 139 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 153
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 154 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 184
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
+LG G FG V G + + + + ++A+ L +E + E V+ +L + +VR+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+G C E E ML+ E L+ L + + + ++ +S G+ YL +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 131
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+HRDL A N+LL + KISDFG++K +++
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 148
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 149 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 179
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
+LG G FG V G + + + + ++A+ L +E + E V+ +L + +VR+
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+G C E E ML+ E L+ L + + + ++ +S G+ YL +
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 125
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+HRDL A N+LL + KISDFG++K +++
Sbjct: 126 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 160
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 159
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 160 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 190
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
+LG G FG V G + + + + ++A+ L +E + E V+ +L + +VR+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+G C E E ML+ E L+ L + + + ++ +S G+ YL +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 131
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+HRDL A N+LL + KISDFG++K +++
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 152
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 153 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
+LG G FG V G + + + + ++A+ L +E + E V+ +L + +VR+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+G C E E ML+ E L+ L + + + ++ +S G+ YL +
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 137
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+HRDL A N+LL + KISDFG++K +++
Sbjct: 138 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 488 KLGQGGFG-PVYWGRLKDGQEIAVKRL--SKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
K+G+G FG + +DG++ +K + S+ S + EE EV V++ ++H N+V+
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 545 CCVEGEEKMLIYEYMPNRSL-------DALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
E ++ +Y L +LF + + LDW I L ++H
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ--EDQILDW------FVQICLALKHVH 142
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
+I+HRD+K+ NI L ++ ++ DFG+A++ + A
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 144
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 145 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 175
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 141
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 142 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 172
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 152
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 153 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
+G G FG VY +L D G+ +A+K++ + + F N E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
EK L+ +Y+P K+ L + + R L Y+H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
I HRD+K N+LLD + K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQH 536
+F L +G+G + V RLK I R+ K + ++ E V + +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 537 RNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLL 594
+ L C + E ++ + EY+ L +F ++ +L + RF E IS L
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 167
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
YLH II+RDLK N+LLD E + K++D+GM K
Sbjct: 168 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
++ F++ S+LG+G VY + K Q+ A+K L K + + E+ V+ +L H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHPN 109
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLH 597
+++L E L+ E + L FD + +K R + ++ I + YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 598 RDSRLRIIHRDLKASNILL-----DEELNPKISDFGMAKI 632
+ I+HRDLK N+L D L KI+DFG++KI
Sbjct: 166 ENG---IVHRDLKPENLLYATPAPDAPL--KIADFGLSKI 200
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG----QEIAVKRLSKASGQGLEEFMNEVM--VISKL 534
+ F+L LGQG FG V+ + G Q A+K L KA+ + + ++ ++ ++
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRG 592
H +V+L + LI +++ R D LF L KE + + +F + E ++
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFL--RGGD--LFTRLSKEVMFTEEDVKFYLAE-LALA 138
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
L +LH L II+RDLK NILLDEE + K++DFG++K
Sbjct: 139 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG----QEIAVKRLSKASGQGLEEFMNEVM--VISKL 534
+ F+L LGQG FG V+ + G Q A+K L KA+ + + ++ ++ ++
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRK--RFNIIEGISRG 592
H +V+L + LI +++ R D LF L KE + + +F + E ++
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFL--RGGD--LFTRLSKEVMFTEEDVKFYLAE-LALA 139
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
L +LH L II+RDLK NILLDEE + K++DFG++K
Sbjct: 140 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 175
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRN 538
+F+ LG+GGFG V+ + K D A+KR+ + + E+ M EV ++KL+H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-DW---------RKR---FNI 585
+VR +E + P L + +KE L DW R+R +I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYL-YIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
I+ + +LH ++HRDLK SNI + K+ DFG+ ++++
Sbjct: 124 FLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 26/183 (14%)
Query: 454 KLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKR 512
K + N++ VKL D F LG+G FG V K +E+ A+K
Sbjct: 7 KQPSNNLDRVKLTD---------------FNFLMVLGKGSFGKVMLADRKGTEELYAIKI 51
Query: 513 LSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALL 568
L K +E M E V++ L + L C + +++ + EY+ L +
Sbjct: 52 LKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL---M 108
Query: 569 FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
+ + + + IS GL +LH+ II+RDLK N++LD E + KI+DFG
Sbjct: 109 YHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFG 165
Query: 629 MAK 631
M K
Sbjct: 166 MCK 168
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHR 537
+++FQL S LG+G +G V K G+ +A+K++ + E+ ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 538 NLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
N++ + E +I E M + L + + + I R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
+ LH + +IHRDLK SN+L++ + K+ DFG+A+I ++ AD G
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTG 174
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHR 537
+++FQL S LG+G +G V K G+ +A+K++ + E+ ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 538 NLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
N++ + E +I E M + L + + + I R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
+ LH + +IHRDLK SN+L++ + K+ DFG+A+I ++ AD G
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTG 174
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHR 537
+++FQL S LG+G +G V K G+ +A+K++ + E+ ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 538 NLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
N++ + E +I E M + L + + + I R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
+ LH + +IHRDLK SN+L++ + K+ DFG+A+I ++ AD G
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTG 174
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
LG+GGF Y D +E+ ++ S E+ E+ + L + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
+ + ++ E RSL L +K + R+ + + I +G+ YLH + R+
Sbjct: 94 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 147
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
IHRDLK N+ L+++++ KI DFG+A
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
LG G F V+ + + G+ A+K + K+ NE+ V+ K++H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN-IIEGISRGLLYLHRDSRLRIIH 606
L+ + + LFD + + + K + +I+ + + YLH + I+H
Sbjct: 77 STTHYYLVMQLVSGGE----LFDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IVH 129
Query: 607 RDLKASNIL-LDEELNPK--ISDFGMAKI 632
RDLK N+L L E N K I+DFG++K+
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKM 158
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 23/171 (13%)
Query: 471 FQFEELATATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVM 529
FQ + ++ KLG+GGF V L DG A+KR+ Q EE E
Sbjct: 19 FQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREAD 78
Query: 530 VISKLQHRNLVRLLGCCVE----GEEKMLIYEYMPNRSL--------DALLFDPLKKERL 577
+ H N++RL+ C+ E L+ + +L D F L ++++
Sbjct: 79 MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF--LTEDQI 136
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
W ++ GI RGL +H HRDLK +NILL +E P + D G
Sbjct: 137 LW-----LLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD---GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHR 537
+++ + +LG G FG V+ R+ + G A K + E E+ +S L+H
Sbjct: 157 DHYDIHEELGTGAFGVVH--RVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHP 214
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
LV L + E ++IYE+M L + D K D + + + +GL ++H
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMH 272
Query: 598 RDSRLRIIHRDLKASNILLDEELNP--KISDFGMAKIFGGNQ 637
++ +H DLK NI+ + + K+ DFG+ Q
Sbjct: 273 ENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 473 FEELATATNNFQLSSK-LGQGGFGPVYWGRLKD-GQEIAVKRLSKAS-GQGLE-EFMNEV 528
F+ + N + L+SK LG+G F V K GQE A K L K GQ E ++E+
Sbjct: 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEI 79
Query: 529 MVISKLQH-RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
V+ + ++ L E +LI EY + +L P E + +I+
Sbjct: 80 AVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCL-PELAEMVSENDVIRLIK 138
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAKIFG 634
I G+ YLH+++ I+H DLK NILL + P KI DFGM++ G
Sbjct: 139 QILEGVYYLHQNN---IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSRKIG 185
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQH 536
+F L +G+G + V RLK I ++ K + ++ E V + +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 537 RNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLL 594
+ L C + E ++ + EY+ L +F ++ +L + RF E IS L
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 135
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
YLH II+RDLK N+LLD E + K++D+GM K
Sbjct: 136 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQH 536
+F L +G+G + V RLK I ++ K + ++ E V + +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 537 RNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLL 594
+ L C + E ++ + EY+ L +F ++ +L + RF E IS L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 120
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
YLH II+RDLK N+LLD E + K++D+GM K
Sbjct: 121 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQH 536
+F L +G+G + V RLK I ++ K + ++ E V + +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 537 RNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLL 594
+ L C + E ++ + EY+ L +F ++ +L + RF E IS L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 124
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
YLH II+RDLK N+LLD E + K++D+GM K
Sbjct: 125 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
N+F LG+G FG V R K G+ A+K L K + + + E V+ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY LF L +ER+ + R RF E +S L
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANG----GELFFHLSRERVFTEERARFYGAEIVS-ALE 119
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH RD +++RD+K N++LD++ + KI+DFG+ K G D A GT
Sbjct: 120 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 168
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
N+F LG+G FG V R K G+ A+K L K + + + E V+ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY L F L +ER+ + R RF E +S L
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS-ALE 119
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH RD +++RD+K N++LD++ + KI+DFG+ K G D A GT
Sbjct: 120 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 168
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
N+F LG+G FG V R K G+ A+K L K + + + E V+ +H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY LF L +ER+ + R RF E +S L
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANG----GELFFHLSRERVFTEERARFYGAEIVS-ALE 122
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH RD +++RD+K N++LD++ + KI+DFG+ K G D A GT
Sbjct: 123 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 171
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 8/160 (5%)
Query: 481 NNFQLSSKLGQGGFGPVYW-GRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
+++ + +LG G FG V+ G A K + E E+ +S L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
V L + E ++IYE+M L + D K D + + + +GL ++H +
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN 168
Query: 600 SRLRIIHRDLKASNILLDEELNP--KISDFGMAKIFGGNQ 637
+ +H DLK NI+ + + K+ DFG+ Q
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 205
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME-LDHERMSYLL 132
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 133 YQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQ 535
T + F KLG G FG V+ + G E +K ++K Q +E+ E+ V+ L
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
H N++++ + ++ E L+ ++ + + L +++ + L
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAKIFGGNQDQADTG 643
Y H ++H+DLK NIL ++ +P KI DFG+A++F ++ +
Sbjct: 139 YFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNAA 187
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
N F+ LG+G FG V + K G+ A+K L K + + + E V+ +H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY LF L +ER+ + R RF E +S L
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANG----GELFFHLSRERVFSEDRARFYGAEIVS-ALD 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH S +++RDLK N++LD++ + KI+DFG+ K G +D A GT
Sbjct: 123 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 172
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
N+F LG+G FG V R K G+ A+K L K + + + E V+ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY LF L +ER+ + R RF E +S L
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANG----GELFFHLSRERVFTEERARFYGAEIVS-ALE 119
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH RD +++RD+K N++LD++ + KI+DFG+ K G D A GT
Sbjct: 120 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
N F+ LG+G FG V + K G+ A+K L K + + + E V+ +H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY LF L +ER+ + R RF E +S L
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANG----GELFFHLSRERVFSEDRARFYGAEIVS-ALD 262
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH S +++RDLK N++LD++ + KI+DFG+ K G +D A GT
Sbjct: 263 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 312
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
N F+ LG+G FG V + K G+ A+K L K + + + E V+ +H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY LF L +ER+ + R RF E +S L
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANG----GELFFHLSRERVFSEDRARFYGAEIVS-ALD 124
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH S +++RDLK N++LD++ + KI+DFG+ K G +D A GT
Sbjct: 125 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 174
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
N F+ LG+G FG V + K G+ A+K L K + + + E V+ +H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY LF L +ER+ + R RF E +S L
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANG----GELFFHLSRERVFSEDRARFYGAEIVS-ALD 123
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH S +++RDLK N++LD++ + KI+DFG+ K G +D A GT
Sbjct: 124 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 173
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
N F+ LG+G FG V + K G+ A+K L K + + + E V+ +H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY LF L +ER+ + R RF E +S L
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANG----GELFFHLSRERVFSEDRARFYGAEIVS-ALD 265
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH S +++RDLK N++LD++ + KI+DFG+ K G +D A GT
Sbjct: 266 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 315
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
N+F LG+G FG V R K G+ A+K L K + + + E V+ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY LF L +ER+ + R RF E +S L
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANG----GELFFHLSRERVFTEERARFYGAEIVS-ALE 119
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH RD +++RD+K N++LD++ + KI+DFG+ K G D A GT
Sbjct: 120 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 21/178 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
T L +G+G +G V W L G+ +AVK S Q E N V+ L
Sbjct: 5 TVARQVALVECVGKGRYGEV-WRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVL----L 59
Query: 535 QHRNLVRLLGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+H N++ + + LI Y + SL +D L+++ L+ + +
Sbjct: 60 RHDNILGFIASDMTSRNSSTQLWLITHYHEHGSL----YDFLQRQTLEPHLALRLAVSAA 115
Query: 591 RGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
GL +LH + + I HRD K+ N+L+ L I+D G+A + D D G
Sbjct: 116 CGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIG 173
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
N+F LG+G FG V R K G+ A+K L K + + + E V+ +H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY L F L +ER+ + R RF E +S L
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS-ALE 124
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH RD +++RD+K N++LD++ + KI+DFG+ K G D A GT
Sbjct: 125 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 173
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
N+F LG+G FG V R K G+ A+K L K + + + E V+ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
L L + + EY L F L +ER+ + R RF E +S L
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS-ALE 119
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
YLH RD +++RD+K N++LD++ + KI+DFG+ K G D A GT
Sbjct: 120 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 489 LGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCC 546
L +GGF VY + + G+E A+KRL + + EV + KL H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 547 VEGEEK-------MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
G+E+ L+ + L L + L I R + ++HR
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
+ IIHRDLK N+LL + K+ DFG A D
Sbjct: 156 -KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPD 193
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT L QFE + T LG G FG V +
Sbjct: 11 FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 55
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 56 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 115
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+P + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 116 VPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 167
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 168 DQQGYIQVTDFGFAKRVKG 186
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEE-F 524
DLP+ ++ ++L +G G FG R K E +AVK + + G+ ++E
Sbjct: 11 DLPIMH------DSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIER--GEKIDENV 62
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF- 583
E++ L+H N+VR + ++ EY L + + + + R F
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAK 631
+I G+S Y H +++ HRDLK N LLD P KI+DFG +K
Sbjct: 123 QLISGVS----YAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK 165
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 507 EIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDA 566
E AVK + K+ EE +++ QH N++ L +G+ L+ E M
Sbjct: 54 EYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRG---GE 107
Query: 567 LLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL-LDEELNP--- 622
LL L+++ R+ ++ I + + YLH ++HRDLK SNIL +DE NP
Sbjct: 108 LLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECL 164
Query: 623 KISDFGMAK 631
+I DFG AK
Sbjct: 165 RICDFGFAK 173
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
+L +G+G FG V+ G + +A+K + + E+F+ E + + + H
Sbjct: 40 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
++V+L+G E +I E L + L ++K LD +S L YL
Sbjct: 100 HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 156
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R +HRD+ A N+L+ K+ DFG+++
Sbjct: 157 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 187
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+ F+ +G G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EYMP + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ K++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT L QFE + T LG G FG V +
Sbjct: 11 FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 55
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 56 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 115
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+P + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 116 VPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 167
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 168 DQQGYIQVTDFGFAKRVKG 186
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPV---YWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRNLVRLL 543
+G G +G V GR G ++A+K+L + L + E+ ++ ++H N++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRT--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 544 GCCVEGE---EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
E + Y MP D L +K E+L + ++ + +GL Y+H
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTD--LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
IIHRDLK N+ ++E+ KI DFG+A+
Sbjct: 149 ---IIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+ F+ +G G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EYMP + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ K++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
++ ++L LG GG V+ R L+D +++AVK L + F E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
H +V + G ++ EY+ +L ++ + + ++ +I +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA-DTGRVVGT 648
L + H++ IIHRD+K +NIL+ K+ DFG+A+ + + T V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGT 182
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 72
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME-LDHERMSYLLY 126
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 127 QMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 170
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
+L +G+G FG V+ G + +A+K + + E+F+ E + + + H
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
++V+L+G E +I E L + L ++K LD +S L YL
Sbjct: 72 HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R +HRD+ A N+L+ K+ DFG+++
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
+L +G+G FG V+ G + +A+K + + E+F+ E + + + H
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
++V+L+G E +I E L + L ++K LD +S L YL
Sbjct: 72 HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R +HRD+ A N+L+ K+ DFG+++
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
+L +G+G FG V+ G + +A+K + + E+F+ E + + + H
Sbjct: 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
++V+L+G E +I E L + L ++K LD +S L YL
Sbjct: 77 HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 133
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R +HRD+ A N+L+ K+ DFG+++
Sbjct: 134 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 507 EIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDA 566
E AVK + K+ EE +++ QH N++ L +G+ L+ E M
Sbjct: 54 EYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRG---GE 107
Query: 567 LLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL-LDEELNP--- 622
LL L+++ R+ ++ I + + YLH ++HRDLK SNIL +DE NP
Sbjct: 108 LLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECL 164
Query: 623 KISDFGMAK 631
+I DFG AK
Sbjct: 165 RICDFGFAK 173
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKX 79
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME-LDHERMSYLLY 133
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
+L +G+G FG V+ G + +A+K + + E+F+ E + + + H
Sbjct: 14 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
++V+L+G E +I E L + L ++K LD +S L YL
Sbjct: 74 HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R +HRD+ A N+L+ K+ DFG+++
Sbjct: 131 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
+L +G+G FG V+ G + +A+K + + E+F+ E + + + H
Sbjct: 15 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
++V+L+G E +I E L + L ++K LD +S L YL
Sbjct: 75 HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 131
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R +HRD+ A N+L+ K+ DFG+++
Sbjct: 132 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME-LDHERMSYLL 132
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 133 YQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
+L +G+G FG V+ G + +A+K + + E+F+ E + + + H
Sbjct: 9 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
++V+L+G E +I E L + L ++K LD +S L YL
Sbjct: 69 HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R +HRD+ A N+L+ K+ DFG+++
Sbjct: 126 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT L QFE + T LG G FG V +
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
P + F L++ + RF + I YLH L +I+RDLK N+++
Sbjct: 124 APGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLMI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ K++DFG AK G
Sbjct: 176 DQQGYIKVTDFGFAKRVKG 194
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT L QFE + T LG G FG V +
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+P + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 124 VPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 176 DQQGYIQVTDFGFAKRVKG 194
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT L QFE + T LG G FG V +
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+P + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 124 VPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 176 DQQGYIQVTDFGFAKRVKG 194
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPV------YWGRLKDGQEIAVKRLSKASGQGLEEFMN 526
E N F+ LG+GGFG V G++ +++ KR+ K G+ + +N
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LN 233
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
E ++ K+ R +V L + L+ M L ++ + + R F
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
E I GL LHR+ RI++RDLK NILLD+ + +ISD G+A
Sbjct: 294 E-ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT L QFE + T LG G FG V +
Sbjct: 39 FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 83
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 84 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+P + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 144 VPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 195
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 196 DQQGYIQVTDFGFAKRVKG 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEE-F 524
DLP+ ++ ++L +G G FG R K E +AVK + + G+ ++E
Sbjct: 10 DLPIMH------DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDENV 61
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF- 583
E++ L+H N+VR + ++ EY L + + + + R F
Sbjct: 62 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 121
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAK 631
+I G+S Y H +++ HRDLK N LLD P KI DFG +K
Sbjct: 122 QLISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 164
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT L QFE + T LG G FG V +
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+P + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 124 VPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 176 DQQGYIQVTDFGFAKRVKG 194
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + K+ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P +F L++ + RF + I
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPG----GEMFSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + K+ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P +F L++ + RF + I
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPG----GEMFSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPV------YWGRLKDGQEIAVKRLSKASGQGLEEFMN 526
E N F+ LG+GGFG V G++ +++ KR+ K G+ + +N
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LN 233
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
E ++ K+ R +V L + L+ M L ++ + + R F
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
E I GL LHR+ RI++RDLK NILLD+ + +ISD G+A
Sbjct: 294 E-ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
++ ++L LG GG V+ R L+D +++AVK L + F E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
H +V + G ++ EY+ +L ++ + + ++ +I +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ-ADTGRVVGT 648
L + H++ IIHRD+K +NI++ K+ DFG+A+ + + T V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + K+ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P + F L++ + RF + I
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
+L +G+G FG V+ G + +A+K + + E+F+ E + + + H
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
++V+L+G E +I E L + L ++K LD +S L YL
Sbjct: 72 HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R +HRD+ A N+L+ K+ DFG+++
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKX 79
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 133
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 25/182 (13%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMV 530
F+ ++ + + ++G GG V+ + Q A+K L +A Q L+ + NE+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 531 ISKLQHRN--LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-W-RKRF--N 584
++KLQ + ++RL + + ++ E N L++ L KK+ +D W RK + N
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKN 135
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++E + H + I+H DLK +N L+ + + K+ DFG+A NQ Q DT
Sbjct: 136 MLEAV-------HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTS 182
Query: 645 VV 646
VV
Sbjct: 183 VV 184
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
++ ++L LG GG V+ R L+D +++AVK L + F E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
H +V + G ++ EY+ +L ++ + + ++ +I +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ-ADTGRVVGT 648
L + H++ IIHRD+K +NI++ K+ DFG+A+ + + T V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEF---MNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K L+E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY P + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+++D++ K++DFG+AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG 193
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
T+ +++ +G G + K E AVK + K+ EE +++ QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQHPN 77
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
++ L +G+ ++ E M LL L+++ R+ ++ I++ + YLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKG---GELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 599 DSRLRIIHRDLKASNIL-LDEELNP---KISDFGMAK 631
++HRDLK SNIL +DE NP +I DFG AK
Sbjct: 135 QG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
+L +G+G FG V+ G +A+K + + E+F+ E + + + H
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
++V+L+G E +I E L + L ++K LD +S L YL
Sbjct: 72 HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R +HRD+ A N+L+ K+ DFG+++
Sbjct: 129 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSR 159
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQH 536
N+F + +G+GGFG VY R D G+ A+K L K QG +NE +++S +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 537 RN--LVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
+ + + +K+ I + M L L D R F E I GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR--FYAAE-IILGL 305
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++H +R +++RDLK +NILLDE + +ISD G+A F + A G
Sbjct: 306 EHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQH 536
N+F + +G+GGFG VY R D G+ A+K L K QG +NE +++S +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 537 RN--LVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
+ + + +K+ I + M L L D R F E I GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR--FYAAE-IILGL 305
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++H +R +++RDLK +NILLDE + +ISD G+A F + A G
Sbjct: 306 EHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQH 536
N+F + +G+GGFG VY R D G+ A+K L K QG +NE +++S +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 537 RN--LVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
+ + + +K+ I + M L L D R F E I GL
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR--FYAAE-IILGL 304
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++H +R +++RDLK +NILLDE + +ISD G+A F + A G
Sbjct: 305 EHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 351
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQH 536
N+F + +G+GGFG VY R D G+ A+K L K QG +NE +++S +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 537 RN--LVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
+ + + +K+ I + M L L D R F E I GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR--FYAAE-IILGL 305
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++H +R +++RDLK +NILLDE + +ISD G+A F + A G
Sbjct: 306 EHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 117
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 171
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 172 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKL 534
T +Q +G G G V G +AVK+LS+ + + E++++ +
Sbjct: 19 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV 78
Query: 535 QHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
H+N++ LL E ++ L+ E M + +L ++ L ER+ + ++
Sbjct: 79 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY-----LLYQ 132
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ N
Sbjct: 133 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTN 177
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCCV 547
+G G FG V+ +L + E+A+K++ + + F N E+ ++ ++H N+V L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 548 EGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
+K L+ EY+P A K+ + + + R L Y+H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---S 159
Query: 602 LRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
+ I HRD+K N+LLD K+ DFG AKI
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P + F L++ + RF + I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 117
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 171
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 172 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKAS--GQGLEEFMNEVMVIS 532
L ++ + +G+G FG V R K Q++ A+K LSK + F E I
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 533 KLQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
+ V L C + ++ + ++ EYMP L L+ + E+ W K + +
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK--WAKFYT-----AE 182
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
+L L + +IHRD+K N+LLD+ + K++DFG
Sbjct: 183 VVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG 219
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 133
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKL 534
T +Q +G G G V G +AVK+LS+ + + E++++ +
Sbjct: 21 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV 80
Query: 535 QHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
H+N++ LL E ++ L+ E M + +L ++ L ER+ + ++
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY-----LLYQ 134
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ N
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 179
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 484 QLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHRN 538
+L +G+G FG V+ G + +A+K + + E+F+ E + + + H +
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 452
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V+L+G E +I E L + L ++K LD +S L YL
Sbjct: 453 IVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R +HRD+ A N+L+ K+ DFG+++
Sbjct: 510 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 80
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 134
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 135 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 522 EEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDW 579
E + EV ++ K+ H N+++L L+++ M L FD L +K L
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSE 110
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
++ I+ + + LH+ L I+HRDLK NILLD+++N K++DFG +
Sbjct: 111 KETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY P + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+++D++ K++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 522 EEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDW 579
E + EV ++ K+ H N+++L L+++ M LFD L +K L
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK----GELFDYLTEKVTLSE 123
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
++ I+ + + LH+ L I+HRDLK NILLD+++N K++DFG +
Sbjct: 124 KETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 522 EEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDW 579
E + EV ++ K+ H N+++L L+++ M LFD L +K L
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK----GELFDYLTEKVTLSE 123
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
++ I+ + + LH+ L I+HRDLK NILLD+++N K++DFG +
Sbjct: 124 KETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 72
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 126
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 127 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 73
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 127
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 128 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 20 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 78
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 79 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 132
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 133 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 176
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 73
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 127
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 128 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+ F+ +G G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ K++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLL 132
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 133 YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
T +Q +G G G V + + D + +A+K+LS+ + + E++++
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 80
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+ H+N++ LL E ++ L+ E M DA L ++ E LD + ++
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 134
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
+ G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 135 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 484 QLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHRN 538
+L +G+G FG V+ G + +A+K + + E+F+ E + + + H +
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 452
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V+L+G E +I E L + L ++K LD +S L YL
Sbjct: 453 IVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
R +HRD+ A N+L+ K+ DFG+++
Sbjct: 510 K---RFVHRDIAARNVLVSATDCVKLGDFGLSR 539
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P + F L++ + RF + I
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 141
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 179
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT L QFE + T LG G FG V +
Sbjct: 19 FLAKAKEDFLKKWESPAQNTAHLD-----QFERIRT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE + + LV+L + ++ EY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
P + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 124 APGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ K++DFG AK G
Sbjct: 176 DQQGYIKVADFGFAKRVKG 194
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P + F L++ + RF + I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+P + F L++ + RF + I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY P + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+++D++ K++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEF---MNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K L+E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY P + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+++D++ +++DFG+AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG 193
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
++F+ S+LG G G V+ K + ++L + + + E+ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V G E + E+M SLD +L K R+ + + + +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
+ +I+HRD+K SNIL++ K+ DFG MA F G + R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
+ + +S LG G G V K +++A+K +SK S + + +N E+ ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
KL H ++++ + E+ ++ E M L D ++ + KE + ++ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
YLH + IIHRDLK N+LL +E+ KI+DFG +KI G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
+ + +S LG G G V K +++A+K +SK S + + +N E+ ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
KL H ++++ + E+ ++ E M L D ++ + KE + ++ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
YLH + IIHRDLK N+LL +E+ KI+DFG +KI G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 28/174 (16%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFM 525
D+P+ ++ + +G G FG R K +E +AVK + + + E
Sbjct: 12 DMPIMH------DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-ENVQ 64
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN- 584
E++ L+H N+VR + +I EY L ER+ RF+
Sbjct: 65 REIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL---------YERICNAGRFSE 115
Query: 585 -----IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAK 631
+ + G+ Y H ++I HRDLK N LLD P KI DFG +K
Sbjct: 116 DEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSK 166
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
++F+ S+LG G G V+ K + ++L + + + E+ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V G E + E+M SLD +L K R+ + + + +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
+ +I+HRD+K SNIL++ K+ DFG MA F G + R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
++F+ S+LG G G V+ K + ++L + + + E+ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V G E + E+M SLD +L K R+ + + + +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
+ +I+HRD+K SNIL++ K+ DFG MA F G + R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
+ + +S LG G G V K +++A+K +SK S + + +N E+ ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
KL H ++++ + E+ ++ E M L D ++ + KE + ++ +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
YLH + IIHRDLK N+LL +E+ KI+DFG +KI G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
+ + +S LG G G V K +++A+K +SK S + + +N E+ ++
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
KL H ++++ + E+ ++ E M L D ++ + KE + ++ +
Sbjct: 69 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
YLH + IIHRDLK N+LL +E+ KI+DFG +KI G
Sbjct: 128 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 167
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 5 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 49
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 50 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 109
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 110 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 161
Query: 617 DEELNPKISDFGMAKIFGG 635
DE+ +++DFG AK G
Sbjct: 162 DEQGYIQVTDFGFAKRVKG 180
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
++F+ S+LG G G V+ K + ++L + + + E+ V+ +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V G E + E+M SLD +L K R+ + + + +GL YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
+ +I+HRD+K SNIL++ K+ DFG MA F G + R+ GT
Sbjct: 185 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 240
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
+ + +S LG G G V K +++A+K +SK S + + +N E+ ++
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
KL H ++++ + E+ ++ E M L D ++ + KE + ++ +
Sbjct: 76 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
YLH + IIHRDLK N+LL +E+ KI+DFG +KI G
Sbjct: 135 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 174
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
+ + ++G GG V+ + Q A+K L +A Q L+ + NE+ ++KLQ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-W-RKRF--NIIEGISRGLL 594
++RL + + ++ E N L++ L KK+ +D W RK + N++E +
Sbjct: 74 IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAV----- 124
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
H + I+H DLK +N L+ + + K+ DFG+A NQ Q DT VV
Sbjct: 125 --HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 168
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
++F+ S+LG G G V+ K + ++L + + + E+ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V G E + E+M SLD +L K R+ + + + +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
+ +I+HRD+K SNIL++ K+ DFG MA F G + R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
++F+ S+LG G G V+ K + ++L + + + E+ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V G E + E+M SLD +L K R+ + + + +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
+ +I+HRD+K SNIL++ K+ DFG MA F G + R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 73 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 129
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 23 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 80
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 81 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 137
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 138 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 179
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 26 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 83
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 84 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 140
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 141 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 182
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Query: 462 TVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQ---EIAVKRLSKASG 518
T KL+ + EE+ AT+ +LG+G FG V+ R++D Q + AVK++
Sbjct: 78 TEKLKPVDYEYREEVHWATHQL----RLGRGSFGEVH--RMEDKQTGFQCAVKKVR---- 127
Query: 519 QGLEEF-MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER- 576
LE F E+M + L +V L G EG + E + SL L+ KE+
Sbjct: 128 --LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQG 180
Query: 577 -LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMA 630
L + + GL YLH SR RI+H D+KA N+LL + + + DFG A
Sbjct: 181 CLPEDRALYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHA 233
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 17/181 (9%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQG-----------LEE 523
EL + + + + G +G V G +G +A+KR+ G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 524 FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
+ E+ +++ H N++ L V EE + Y+ + L + +R+ +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ- 134
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+I + LL LH ++HRDL NILL + + I DF +A+ +D AD
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-----EDTADAN 189
Query: 644 R 644
+
Sbjct: 190 K 190
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 80 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 136
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 17/181 (9%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQG-----------LEE 523
EL + + + + G +G V G +G +A+KR+ G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 524 FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
+ E+ +++ H N++ L V EE + Y+ + L + +R+ +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ- 134
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
+I + LL LH ++HRDL NILL + + I DF +A+ +D AD
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-----EDTADAN 189
Query: 644 R 644
+
Sbjct: 190 K 190
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Query: 462 TVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQ---EIAVKRLSKASG 518
T KL+ + EE+ AT+ +LG+G FG V+ R++D Q + AVK++
Sbjct: 59 TEKLKPVDYEYREEVHWATHQL----RLGRGSFGEVH--RMEDKQTGFQCAVKKVR---- 108
Query: 519 QGLEEF-MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER- 576
LE F E+M + L +V L G EG + E + SL L+ KE+
Sbjct: 109 --LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQG 161
Query: 577 -LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMA 630
L + + GL YLH SR RI+H D+KA N+LL + + + DFG A
Sbjct: 162 CLPEDRALYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHA 214
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
+ + ++G GG V+ + Q A+K L +A Q L+ + NE+ ++KLQ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW-RKRF--NIIEGISRGLLY 595
++RL + + IY M ++D + KK W RK + N++E +
Sbjct: 71 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 121
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
H + I+H DLK +N L+ + + K+ DFG+A NQ Q DT VV
Sbjct: 122 -HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 165
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 507 EIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDA 566
E AVK + K+ EE +++ QH N++ L +G+ ++ E
Sbjct: 49 EFAVKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKG---GE 102
Query: 567 LLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL-LDEELNP--- 622
LL L+++ R+ ++ I++ + YLH ++HRDLK SNIL +DE NP
Sbjct: 103 LLDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESI 159
Query: 623 KISDFGMAK 631
+I DFG AK
Sbjct: 160 RICDFGFAK 168
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 25/182 (13%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMV 530
F+ ++ + + ++G GG V+ + Q A+K L +A Q L+ + NE+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 531 ISKLQHRN--LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-W-RKRF--N 584
++KLQ + ++RL + + ++ E N L++ L KK+ +D W RK + N
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKN 135
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
++E + H + I+H DLK +N L+ + + K+ DFG+A NQ Q D
Sbjct: 136 MLEAV-------HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDXXX 182
Query: 645 VV 646
VV
Sbjct: 183 VV 184
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
L +L + ++ EY P + F L++ + RF + I
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+++D++ K++DFG AK G
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 16/168 (9%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMN 526
DLP+ ++ ++L +G G FG R K E+ + + +
Sbjct: 11 DLPIMH------DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKR 64
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF-NI 585
E++ L+H N+VR + ++ EY L + + + + R F +
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAK 631
I G+S Y H +++ HRDLK N LLD P KI DFG +K
Sbjct: 125 ISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 165
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
+ + ++G GG V+ + Q A+K L +A Q L+ + NE+ ++KLQ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW-RKRF--NIIEGISRGLLY 595
++RL + + IY M ++D + KK W RK + N++E +
Sbjct: 70 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 120
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
H + I+H DLK +N L+ + + K+ DFG+A NQ Q DT VV
Sbjct: 121 -HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 164
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE--EFMNEVMVISKLQHR 537
+ +++ +G G +G V K + + +A+K++ + ++ + E+ ++++L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 538 NLVRLLGCC----VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
++V++L VE +++ + + + L P+ L + ++ + G+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIK---TLLYNLLVGV 169
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
Y+H I+HRDLK +N L++++ + K+ DFG+A+
Sbjct: 170 KYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
T +Q +G G G V Y L+ + +A+K+LS+ + + E++++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
+ H+N++ LL EE +Y M +DA L ++ E LD + ++ +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
G+ +LH IIHRDLK SNI++ + KI DFG+A+ G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
+ + +S LG G G V K +++A++ +SK S + + +N E+ ++
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
KL H ++++ + E+ ++ E M L D ++ + KE + ++ +
Sbjct: 209 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
YLH + IIHRDLK N+LL +E+ KI+DFG +KI G
Sbjct: 268 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 307
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
+ + ++G GG V+ + Q A+K L +A Q L+ + NE+ ++KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-W-RKRF--NIIEGISRGLL 594
++RL + + ++ E N L++ L KK+ +D W RK + N++E +
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAV----- 168
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
H + I+H DLK +N L+ + + K+ DFG+A NQ Q DT VV
Sbjct: 169 --HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 212
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY P + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+++D++ +++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG 193
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
+ + ++G GG V+ + Q A+K L +A Q L+ + NE+ ++KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW-RKRF--NIIEGISRGLLY 595
++RL + + IY M ++D + KK W RK + N++E +
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 168
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
H + I+H DLK +N L+ + + K+ DFG+A NQ Q DT VV
Sbjct: 169 -HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 212
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
++F+ S+LG G G V+ K + ++L + + + E+ V+ +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V G E + E+M SLD +L K R+ + + + +GL YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
+ +I+HRD+K SNIL++ K+ DFG MA F G + R+ GT
Sbjct: 126 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGT 181
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
+ + +S LG G G V K +++A++ +SK S + + +N E+ ++
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
KL H ++++ + E+ ++ E M L D ++ + KE + ++ +
Sbjct: 195 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
YLH + IIHRDLK N+LL +E+ KI+DFG +KI G
Sbjct: 254 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 293
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
+ + ++G GG V+ + Q A+K L +A Q L+ + NE+ ++KLQ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW-RKRF--NIIEGISRGLLY 595
++RL + + IY M ++D + KK W RK + N++E +
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 168
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
H + I+H DLK +N L+ + + K+ DFG+A NQ Q DT VV
Sbjct: 169 -HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 212
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 41/204 (20%)
Query: 464 KLQDLPLFQFEELATATNNFQLSSK-LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
++ ++P F+ + N +S K LG G G V + G+ +AVKR+ L
Sbjct: 2 RIANIPNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-------LI 49
Query: 523 EFMNEVMVISKL-----QHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDP-LKKE 575
+F + ++ KL H N++R C E ++ L I + N +L L+ + E
Sbjct: 50 DFCDIALMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDE 107
Query: 576 RLDWRKRFN---IIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-------------EE 619
L +K +N ++ I+ G+ +LH L+IIHRDLK NIL+ E
Sbjct: 108 NLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164
Query: 620 LNPKISDFGMAKIFGGNQDQADTG 643
L ISDFG+ K Q T
Sbjct: 165 LRILISDFGLCKKLDSGQSSFRTN 188
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
++F+ S+LG G G V+ K + ++L + + + E+ V+ +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V G E + E+M SLD +L K R+ + + + +GL YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
+ +I+HRD+K SNIL++ K+ DFG MA F G + R+ GT
Sbjct: 150 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 205
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
L +L + ++ EY P + F L++ + RF + I
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+++D++ K++DFG AK G
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI--AVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
+ L + +G+G +G V ++ G I A K++ K + ++ F E+ ++ L H N++
Sbjct: 11 YTLENTIGRGSWGEVKIA-VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR--FNIIEGISRGLLYLHR 598
RL + + L+ E LF+ + +R+ +R+ I++ + + Y H
Sbjct: 70 RLYETFEDNTDIYLVMEL----CTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCH- 123
Query: 599 DSRLRIIHRDLKASNILL--DEELNP-KISDFGMAKIF 633
+L + HRDLK N L D +P K+ DFG+A F
Sbjct: 124 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
L +L + ++ EY P + F L++ + RF + I
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+++D++ K++DFG AK G
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 13 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 57
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 58 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 117
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 118 VAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 169
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 170 DQQGYIQVTDFGFAKRVKG 188
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 41/198 (20%)
Query: 464 KLQDLPLFQFEELATATNNFQLSSK-LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
++ ++P F+ + N +S K LG G G V + G+ +AVKR+ L
Sbjct: 2 RIANIPNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-------LI 49
Query: 523 EFMNEVMVISKL-----QHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDP-LKKE 575
+F + ++ KL H N++R C E ++ L I + N +L L+ + E
Sbjct: 50 DFCDIALMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDE 107
Query: 576 RLDWRKRFN---IIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-------------EE 619
L +K +N ++ I+ G+ +LH L+IIHRDLK NIL+ E
Sbjct: 108 NLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164
Query: 620 LNPKISDFGMAKIFGGNQ 637
L ISDFG+ K Q
Sbjct: 165 LRILISDFGLCKKLDSGQ 182
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQH 536
++L +G+G F V ++ GQ+ AVK + + + G E+ E + L+H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL-- 594
++V LL +++E+M L F+ +K+ + + R +L
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGAD---LCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 595 --YLHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIFG 634
Y H ++ IIHRD+K N+LL + N K+ DFG+A G
Sbjct: 143 LRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG 184
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFAEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 39 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 83
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 84 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 144 VAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 195
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 196 DQQGYIQVTDFGFAKRVKG 214
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 23/187 (12%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEE-F 524
DLP+ ++ ++L +G G FG R K E +AVK + + G+ ++E
Sbjct: 11 DLPIMH------DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDENV 62
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF- 583
E++ L+H N+VR + ++ EY L + + + + R F
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAKIFGGNQDQAD 641
+I G+S Y H +++ HRDLK N LLD P KI FG +K + D
Sbjct: 123 QLISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKD 175
Query: 642 TGRVVGT 648
T VGT
Sbjct: 176 T---VGT 179
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEE-F 524
DLP+ ++ ++L +G G FG R K E +AVK + + G+ ++E
Sbjct: 11 DLPIMH------DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDENV 62
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF- 583
E++ L+H N+VR + ++ EY L + + + + R F
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAK 631
+I G+S Y H +++ HRDLK N LLD P KI FG +K
Sbjct: 123 QLISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI--AVKRLSKASGQGLEEFMNEV 528
FQ + L + +G+G +G V ++ G I A K++ K + ++ F E+
Sbjct: 16 FQGSTKGDINQYYTLENTIGRGSWGEVKIA-VQKGTRIRRAAKKIPKYFVEDVDRFKQEI 74
Query: 529 MVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR--FNII 586
++ L H N++RL + + L+ E LF+ + +R+ +R+ I+
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMEL----CTGGELFERVVHKRV-FRESDAARIM 129
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILL--DEELNP-KISDFGMAKIF 633
+ + + Y H +L + HRDLK N L D +P K+ DFG+A F
Sbjct: 130 KDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH 536
+ + + + +LG G FG V+ K G+ K ++ NE+ ++++L H
Sbjct: 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH 107
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE--RLDWRKRFNIIEGISRGLL 594
L+ L + E +LI E++ LFD + E ++ + N + GL
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSG----GELFDRIAAEDYKMSEAEVINYMRQACEGLK 163
Query: 595 YLHRDSRLRIIHRDLKASNILLDEEL--NPKISDFGMA 630
++H S I+H D+K NI+ + + + KI DFG+A
Sbjct: 164 HMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEFMN---EVMVISKLQH 536
++F++ +G+G FG V + D +++ A+K ++K E N E+ ++ L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
LV L + E+ ++ + + L L ++ + +++ + I ++ L
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-----QQNVHFKEE-TVKLFICELVMAL 128
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
RIIHRD+K NILLDE + I+DF +A +
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
++ ++L LG GG V+ R L+ +++AVK L + F E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
H +V + G ++ EY+ +L ++ + + ++ +I +
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ-ADTGRVVGT 648
L + H++ IIHRD+K +NI++ K+ DFG+A+ + + T V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 39 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 83
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 84 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 144 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 195
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 196 DQQGYIQVTDFGFAKRVKG 214
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 21/177 (11%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISK 533
+T L +G+G FG V+ G+ + G+E+AVK S + E VM
Sbjct: 5 STIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM---- 59
Query: 534 LQHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
L+H N++ + + + L+ +Y + SL FD L + + +
Sbjct: 60 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALST 115
Query: 590 SRGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
+ GL +LH + + I HRDLK+ NIL+ + I+D G+A D D
Sbjct: 116 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 172
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
++F+ S+LG G G V+ K + ++L + + + E+ V+ +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V G E + E+M SLD +L K R+ + + + +GL YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
+ +I+HRD+K SNIL++ K+ DFG MA F G + R+ GT
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 197
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 19 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 64 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 124 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 176 DQQGYIQVTDFGFAKRVKG 194
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 41/198 (20%)
Query: 464 KLQDLPLFQFEELATATNNFQLSSK-LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
++ ++P F+ + N +S K LG G G V + G+ +AVKR+ L
Sbjct: 20 RIANIPNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-------LI 67
Query: 523 EFMNEVMVISKL-----QHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDP-LKKE 575
+F + ++ KL H N++R C E ++ L I + N +L L+ + E
Sbjct: 68 DFCDIALMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDE 125
Query: 576 RLDWRKRFN---IIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-------------EE 619
L +K +N ++ I+ G+ +LH L+IIHRDLK NIL+ E
Sbjct: 126 NLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAEN 182
Query: 620 LNPKISDFGMAKIFGGNQ 637
L ISDFG+ K Q
Sbjct: 183 LRILISDFGLCKKLDSGQ 200
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 489 LGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCC 546
LG+G V L QE AVK + K G EV ++ + Q HRN++ L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
E + L++E M S+ + + K+ + + +++ ++ L +LH I H
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIH---KRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 607 RDLKASNILLDE--ELNP-KISDFGMAKIFGGNQD 638
RDLK NIL + +++P KI DFG+ N D
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGD 169
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ +F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAG----GEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 41/198 (20%)
Query: 464 KLQDLPLFQFEELATATNNFQLSSK-LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
++ ++P F+ + N +S K LG G G V + G+ +AVKR+ L
Sbjct: 20 RIANIPNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-------LI 67
Query: 523 EFMNEVMVISKL-----QHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDP-LKKE 575
+F + ++ KL H N++R C E ++ L I + N +L L+ + E
Sbjct: 68 DFCDIALMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDE 125
Query: 576 RLDWRKRFN---IIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-------------EE 619
L +K +N ++ I+ G+ +LH L+IIHRDLK NIL+ E
Sbjct: 126 NLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAEN 182
Query: 620 LNPKISDFGMAKIFGGNQ 637
L ISDFG+ K Q
Sbjct: 183 LRILISDFGLCKKLDSGQ 200
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA--------SGQGLEEFMNEVMV 530
+ + S LG G FG V+ K+ +E+ VK + K L + E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+S+++H N++++L L+ E LD F + RLD I +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFID-RHPRLDEPLASYIFRQLV 140
Query: 591 RGLLYLHRDSRLR-IIHRDLKASNILLDEELNPKISDFGMA 630
+ YL RL+ IIHRD+K NI++ E+ K+ DFG A
Sbjct: 141 SAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ + F L++ + RF + I YLH L +I+RDLK N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
T L +G+G FG V+ G+ + G+E+AVK S + E VM L
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----L 57
Query: 535 QHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+H N++ + + + L+ +Y + SL FD L + + + +
Sbjct: 58 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTA 113
Query: 591 RGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
GL +LH + + I HRDLK+ NIL+ + I+D G+A D D
Sbjct: 114 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 169
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
T L +G+G FG V+ G+ + G+E+AVK S + E VM L
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----L 55
Query: 535 QHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+H N++ + + + L+ +Y + SL FD L + + + +
Sbjct: 56 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTA 111
Query: 591 RGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
GL +LH + + I HRDLK+ NIL+ + I+D G+A D D
Sbjct: 112 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 167
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
T L +G+G FG V+ G+ + G+E+AVK S + E VM L
Sbjct: 26 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----L 80
Query: 535 QHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+H N++ + + + L+ +Y + SL FD L + + + +
Sbjct: 81 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTA 136
Query: 591 RGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
GL +LH + + I HRDLK+ NIL+ + I+D G+A D D
Sbjct: 137 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 192
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCC 546
K+G+G +G VY + KDG++ L + G G+ E+ ++ +L+H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 547 VEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRD 599
+ ++ L+++Y + + F K +K + G+ + LLY +H
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKAN---KKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 600 SRLRIIHRDLKASNILL----DEELNPKISDFGMAKIFGGN-QDQADTGRVVGTL 649
++HRDLK +NIL+ E KI+D G A++F + AD VV T
Sbjct: 145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 199
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAV----KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
LG+GGFG V+ ++K ++ + +G + M E +++K+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+ L+ M + ++ D + R F + +S GL +LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS-GLEHLHQRN-- 309
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMA 630
II+RDLK N+LLD++ N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAV----KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
LG+GGFG V+ ++K ++ + +G + M E +++K+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+ L+ M + ++ D + R F + +S GL +LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS-GLEHLHQRN-- 309
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMA 630
II+RDLK N+LLD++ N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 35/159 (22%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCV 547
LG G G + + + D +++AVKR+ + EV ++ + +H N++R C
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD---REVQLLRESDEHPNVIRYF--CT 86
Query: 548 EGEEKM----------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
E + + + EY+ + L +P+ +++ + GL +LH
Sbjct: 87 EKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPI-----------TLLQQTTSGLAHLH 135
Query: 598 RDSRLRIIHRDLKASNILLDE-----ELNPKISDFGMAK 631
L I+HRDLK NIL+ ++ ISDFG+ K
Sbjct: 136 S---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
T L +G+G FG V+ G+ + G+E+AVK S + E VM L
Sbjct: 39 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----L 93
Query: 535 QHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+H N++ + + + L+ +Y + SL FD L + + + +
Sbjct: 94 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTA 149
Query: 591 RGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
GL +LH + + I HRDLK+ NIL+ + I+D G+A D D
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 205
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAV----KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
LG+GGFG V+ ++K ++ + +G + M E +++K+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+ L+ M + ++ D + R F + +S GL +LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS-GLEHLHQRN-- 309
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMA 630
II+RDLK N+LLD++ N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAV----KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
LG+GGFG V+ ++K ++ + +G + M E +++K+ R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
+ L+ M + ++ D + R F + +S GL +LH+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS-GLEHLHQRN-- 309
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMA 630
II+RDLK N+LLD++ N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
++AK KE + K + NT +L QF+ + T LG G FG V +
Sbjct: 18 FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
K+ G A+K L K + +E +NE ++ + LV+L + ++ EY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
+ +F L++ + RF + I YLH L +I+RDLK N+++
Sbjct: 123 VAG----GEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLII 174
Query: 617 DEELNPKISDFGMAKIFGG 635
D++ +++DFG AK G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
++F+ S+LG G G V + + I ++L + + + E+ V+ +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
+V G E + E+M SLD +L + +R+ + + RGL YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLR- 131
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
+ +I+HRD+K SNIL++ K+ DFG MA F G + R+ GT
Sbjct: 132 -EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGT 188
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
++ ++L LG GG V+ R L+ +++AVK L + F E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
H +V + G ++ EY+ +L ++ + + ++ +I +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ-ADTGRVVGT 648
L + H++ IIHRD+K +NI++ K+ DFG+A+ + + T V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
++ ++L LG GG V+ R L+ +++AVK L + F E + L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
H +V + G ++ EY+ +L ++ + + ++ +I +
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 144
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ-ADTGRVVGT 648
L + H++ IIHRD+K +NI++ K+ DFG+A+ + + T V+GT
Sbjct: 145 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 199
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F LG+G FG V K E+ AVK L K +E M E V++
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
+ L C + +++ + EY+ L ++ + R I+ GL +
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
L II+RDLK N++LD E + KI+DFGM K
Sbjct: 137 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 17/136 (12%)
Query: 505 GQEIAVKRLS----KASGQGLEEFMN----EVMVISKLQ-HRNLVRLLGCCVEGEEKMLI 555
G E AVK + + S + LEE E ++ ++ H +++ L+ L+
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 556 YEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
++ M LFD L +K L ++ +I+ + + +LH ++ I+HRDLK NI
Sbjct: 179 FDLMRK----GELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENI 231
Query: 615 LLDEELNPKISDFGMA 630
LLD+ + ++SDFG +
Sbjct: 232 LLDDNMQIRLSDFGFS 247
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
+F LG+G FG V K E+ AVK L K +E M E V++
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
+ L C + +++ + EY+ + L++ + R I+ GL +
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYV---NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
L II+RDLK N++LD E + KI+DFGM K
Sbjct: 458 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 490
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 21/169 (12%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKLQHRNLVR 541
L +G+G FG V+ G+ + G+E+AVK S + E VM L+H N++
Sbjct: 7 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILG 61
Query: 542 LLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
+ + + L+ +Y + SL FD L + + + + GL +LH
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLH 117
Query: 598 RD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
+ + I HRDLK+ NIL+ + I+D G+A D D
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 166
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
+ F+ LG G FG V + ++ G A+K L K + +E +NE ++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
LV+L + ++ EY+ + F L++ + RF + I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
YLH L +I+RDLK N+L+D++ +++DFG AK G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNE 527
+ +L ++++ +G+G FG V R K +++ A+K LSK + F E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+++ +V+L + ++ EYMP L L+ + E+ W RF E
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--W-ARFYTAE 181
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
+ L L + IHRD+K N+LLD+ + K++DFG
Sbjct: 182 VV----LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNE 527
+ +L ++++ +G+G FG V R K +++ A+K LSK + F E
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+++ +V+L + ++ EYMP L L+ + E+ W RF E
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--W-ARFYTAE 176
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
+ L L + IHRD+K N+LLD+ + K++DFG
Sbjct: 177 VV----LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 213
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH-RN 538
+++QL KLG+G + V+ + + +++ VK L ++ E+ ++ L+ N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGPN 93
Query: 539 LVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
++ L + + L++E++ N F L + D+ RF + E I + L Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD-----FKQLYQTLTDYDIRFYMYE-ILKALDYC 147
Query: 597 HRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIFGGNQD 638
H + I+HRD+K N+++D E ++ D+G+A+ + Q+
Sbjct: 148 HS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNE 527
+ +L ++++ +G+G FG V R K +++ A+K LSK + F E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
+++ +V+L + ++ EYMP L L+ + E+ W RF E
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--W-ARFYTAE 181
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
+ L L + IHRD+K N+LLD+ + K++DFG
Sbjct: 182 VV----LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQGLEE--FMNEVMVISKLQHR 537
N+ + ++G G G V+ R K G IAVK++ ++ + + M+ +V+
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN--RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
+V+ G + + + E M L + P+ + L + I + L Y
Sbjct: 85 YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYY 139
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
L + +IHRD+K SNILLDE K+ DFG++
Sbjct: 140 LK--EKHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 480 TNNFQLSSKLGQGGFGPVY--WGRLKDGQEIAVKRLSKASGQGLEE--FMNEVMVISKL- 534
T F K+G G FG V+ RL DG A+KR K ++E + EV + L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGL 593
QH ++VR E + ++ EY SL DA+ + + +++ + RGL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 594 LYLHRDSRLRIIHRDLKASNILL 616
Y+H + ++H D+K SNI +
Sbjct: 127 RYIHS---MSLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 480 TNNFQLSSKLGQGGFGPVY--WGRLKDGQEIAVKRLSKASGQGLEE--FMNEVMVISKL- 534
T F K+G G FG V+ RL DG A+KR K ++E + EV + L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGL 593
QH ++VR E + ++ EY SL DA+ + + +++ + RGL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 594 LYLHRDSRLRIIHRDLKASNILL 616
Y+H + ++H D+K SNI +
Sbjct: 127 RYIHS---MSLVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 480 TNNFQLSSKLGQGGFGPVY--WGRLKDGQEIAVKRLSKASGQGLEE--FMNEVMVISKL- 534
T F K+G G FG V+ RL DG A+KR K ++E + EV + L
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGL 593
QH ++VR E + ++ EY SL DA+ + + +++ + RGL
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 594 LYLHRDSRLRIIHRDLKASNILL 616
Y+H + ++H D+K SNI +
Sbjct: 129 RYIHS---MSLVHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 480 TNNFQLSSKLGQGGFGPVY--WGRLKDGQEIAVKRLSKASGQGLEE--FMNEVMVISKL- 534
T F K+G G FG V+ RL DG A+KR K ++E + EV + L
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 64
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGL 593
QH ++VR E + ++ EY SL DA+ + + +++ + RGL
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 594 LYLHRDSRLRIIHRDLKASNILL 616
Y+H + ++H D+K SNI +
Sbjct: 125 RYIHS---MSLVHMDIKPSNIFI 144
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 489 LGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCC 546
LG+G V L QE AVK + K G EV ++ + Q HRN++ L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
E + L++E M S+ + + K+ + + +++ ++ L +LH I H
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIH---KRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 607 RDLKASNILLDE--ELNP-KISDFGMAKIFGGNQD 638
RDLK NIL + +++P KI DF + N D
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 37/175 (21%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWG--RLKDGQE--IAVKRLSKASGQGLEEFMNEV 528
+E + +N F++ K+G+G F VY +L+ G E IA+K L S + +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--------HPI 64
Query: 529 MVISKLQ-------HRNLVRLLGCCVEGEEKMLIYEYMPNRS----LDALLFDPLKKERL 577
+ ++LQ N++ + C + + ++ Y+ + S L++L F +++ L
Sbjct: 65 RIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYML 124
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
+ K L R + I+HRD+K SN L + L + DFG+A+
Sbjct: 125 NLFKA-------------LKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Query: 488 KLGQGGFGPVYWGRLKDGQ---EIAVKRLSKASGQGLEEF-MNEVMVISKLQHRNLVRLL 543
+LG+G FG V+ R+KD Q + AVK++ LE F + E++ + L +V L
Sbjct: 79 RLGRGSFGEVH--RMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 130
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
G EG + E + SL L+ L ++R + GL YLH
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA-----LYYLGQALEGLEYLHTR-- 183
Query: 602 LRIIHRDLKASNILLDEELN-PKISDFGMA 630
RI+H D+KA N+LL + + + DFG A
Sbjct: 184 -RILHGDVKADNVLLSSDGSRAALCDFGHA 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
H L+IIHRD+K SNILLD N K+ DFG++
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 36/165 (21%)
Query: 488 KLGQGGFGPVYWGRLKDGQ------EIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
++G+G F VY G + E+ ++L+K+ Q F E + LQH N+VR
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIVR 89
Query: 542 LLGC---CVEGEE-KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---------G 588
V+G++ +L+ E + +L L KRF + +
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYL------------KRFKVXKIKVLRSWCRQ 137
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKI 632
I +GL +LH + IIHRDLK NI + KI D G+A +
Sbjct: 138 ILKGLQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 16/146 (10%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN---- 538
+ + KLG G F V+ G++ ++ K++ E ++E+ ++ +++ +
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 82
Query: 539 ----LVRLLG----CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+V+LL V G +++E + + L ++ + L K+ II+ +
Sbjct: 83 NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKK--IIQQVL 140
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL 616
+GL YLH ++ RIIH D+K NILL
Sbjct: 141 QGLDYLH--TKCRIIHTDIKPENILL 164
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
++RG+ +L S + IHRDL A NILL E KI DFG+A+ N D G
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKG 259
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVI 531
A +L LG+G FG V + + +AVK L + A+ + M E+ ++
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKIL 84
Query: 532 SKL-QHRNLVRLLGCCV-EGEEKMLIYEY 558
+ + H N+V LLG C +G M+I EY
Sbjct: 85 THIGHHLNVVNLLGACTKQGGPLMVIVEY 113
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Query: 488 KLGQGGFGPVYWGRLKDGQ---EIAVKRLSKASGQGLEEF-MNEVMVISKLQHRNLVRLL 543
++G+G FG V+ R+KD Q + AVK++ LE F + E++ + L +V L
Sbjct: 65 RVGRGSFGEVH--RMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 116
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
G EG + E + SL L+ L ++R + GL YLH
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRA-----LYYLGQALEGLEYLHTR-- 169
Query: 602 LRIIHRDLKASNILLDEELN-PKISDFGMA 630
RI+H D+KA N+LL + + + DFG A
Sbjct: 170 -RILHGDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL 542
+ ++ LG+G FG V+ ++ + + K G E+ +++ +HRN++ L
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHL 66
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE--RLDWRKRFNIIEGISRGLLYLHRDS 600
EE ++I+E++ LD +F+ + L+ R+ + + + L +LH +
Sbjct: 67 HESFESMEELVMIFEFISG--LD--IFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 601 RLRIIHRDLKASNILLDEELNP--KISDFGMAK 631
I H D++ NI+ + KI +FG A+
Sbjct: 123 ---IGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 16/146 (10%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN---- 538
+ + KLG G F V+ G++ ++ K++ E ++E+ ++ +++ +
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 98
Query: 539 ----LVRLLG----CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
+V+LL V G +++E + + L ++ + L K+ II+ +
Sbjct: 99 NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKK--IIQQVL 156
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL 616
+GL YLH ++ RIIH D+K NILL
Sbjct: 157 QGLDYLH--TKCRIIHTDIKPENILL 180
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 31/171 (18%)
Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMN------EVMVISKL 534
++L LG+GGFG V+ G RL D ++A+K + + G + EV ++ K+
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 535 Q----HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDAL-LFDPLKKERLDWRKRFNIIEGI 589
H ++RLL E ML+ E R L A LFD + + + + EG
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLE----RPLPAQDLFDYITE-------KGPLGEGP 140
Query: 590 SRGLL------YLHRDSRLRIIHRDLKASNILLDEELN-PKISDFGMAKIF 633
SR H SR ++HRD+K NIL+D K+ DFG +
Sbjct: 141 SRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSGALL 190
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 19/148 (12%)
Query: 488 KLGQGGFGPVYWGRLKDGQ---EIAVKRLSKASGQGLEEF-MNEVMVISKLQHRNLVRLL 543
++G+G FG V+ R+KD Q + AVK++ LE F + E++ + L +V L
Sbjct: 81 RVGRGSFGEVH--RMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 132
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
G EG + E + SL L+ + L + + GL YLH R
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTR---R 186
Query: 604 IIHRDLKASNILLDEELN-PKISDFGMA 630
I+H D+KA N+LL + + + DFG A
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 538 NLVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
N+V+LL + K LI+EY+ N F L D+ R+ I E + + L Y
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYIYE-LLKALDY 142
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
H I+HRD+K N+++D EL ++ D+G+A+ +
Sbjct: 143 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 178
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 538 NLVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
N+V+LL + K LI+EY+ N F L D+ R+ I E + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYIYE-LLKALDY 140
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
H I+HRD+K N+++D EL ++ D+G+A+ +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 538 NLVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
N+V+LL + K LI+EY+ N F L D+ R+ I E + + L Y
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYIYE-LLKALDY 141
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
H I+HRD+K N+++D EL ++ D+G+A+ +
Sbjct: 142 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 177
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 538 NLVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
N+V+LL + K LI+EY+ N F L D+ R+ I E + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYIYE-LLKALDY 140
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
H I+HRD+K N+++D EL ++ D+G+A+ +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 538 NLVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
N+V+LL + K LI+EY+ N F L D+ R+ I E + + L Y
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYIYE-LLKALDY 161
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
H I+HRD+K N+++D EL ++ D+G+A+ +
Sbjct: 162 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 197
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 538 NLVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
N+V+LL + K LI+EY+ N F L D+ R+ I E + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYIYE-LLKALDY 140
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
H I+HRD+K N+++D EL ++ D+G+A+ +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 538 NLVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
N+V+LL + K LI+EY+ N F L D+ R+ I E + + L Y
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYIYE-LLKALDY 141
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
H I+HRD+K N+++D EL ++ D+G+A+ +
Sbjct: 142 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 177
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 538 NLVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
N+V+LL + K LI+EY+ N F L D+ R+ I E + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYIYE-LLKALDY 140
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
H I+HRD+K N+++D EL ++ D+G+A+ +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 538 NLVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
N+V+LL + K LI+EY+ N F L D+ R+ I E + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYIYE-LLKALDY 140
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
H I+HRD+K N+++D EL ++ D+G+A+ +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 476 LATATNNFQLSS-------KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEE---F 524
++ NF++ + +LG+G +G V R + GQ +AVKR+ +A+ E+
Sbjct: 39 ISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLL 97
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK-ERLDWRKRF 583
M+ + + + V G + + E M + SLD + K + +
Sbjct: 98 MDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILG 156
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
I I + L +LH S+L +IHRD+K SN+L++ K+ DFG++
Sbjct: 157 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 538 NLVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
N+V+LL + K LI+EY+ N F L D+ R+ I E + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYIYE-LLKALDY 140
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
H I+HRD+K N+++D EL ++ D+G+A+ +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEE---FMNEVMVI 531
+ ++ + +LG+G +G V R + GQ +AVKR+ +A+ E+ M+ + +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISM 60
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK-ERLDWRKRFNIIEGIS 590
+ V G + + E M + SLD + K + + I I
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
+ L +LH S+L +IHRD+K SN+L++ K+ DFG++
Sbjct: 120 KALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 452 IAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAV 510
+A L A N L L +E + +Q+ LG GGFG VY G R+ D +A+
Sbjct: 10 LAHLRAAPCN--DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 67
Query: 511 KRLSKASGQGLEEFMN------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR 562
K + K E N EV+++ K+ ++RLL + +LI E P
Sbjct: 68 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEP 126
Query: 563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLD 617
D LFD + +R + E ++R + + ++HRD+K NIL+D
Sbjct: 127 VQD--LFDFIT-------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 177
Query: 618 EELNP---KISDFGMAKIF 633
LN K+ DFG +
Sbjct: 178 --LNRGELKLIDFGSGALL 194
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 452 IAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAV 510
+A L A N L L +E + +Q+ LG GGFG VY G R+ D +A+
Sbjct: 24 LAHLRAAPCN--DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 81
Query: 511 KRLSKASGQGLEEFMN------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR 562
K + K E N EV+++ K+ ++RLL + +LI E P
Sbjct: 82 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEP 140
Query: 563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLD 617
D LFD + +R + E ++R + + ++HRD+K NIL+D
Sbjct: 141 VQD--LFDFIT-------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 191
Query: 618 EELNP---KISDFGMAKIF 633
LN K+ DFG +
Sbjct: 192 --LNRGELKLIDFGSGALL 208
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 452 IAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAV 510
+A L A N L L +E + +Q+ LG GGFG VY G R+ D +A+
Sbjct: 10 LAHLRAAPCN--DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 67
Query: 511 KRLSKASGQGLEEFMN------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR 562
K + K E N EV+++ K+ ++RLL + +LI E P
Sbjct: 68 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEP 126
Query: 563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLD 617
D LFD + +R + E ++R + + ++HRD+K NIL+D
Sbjct: 127 VQD--LFDFIT-------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 177
Query: 618 EELNP---KISDFGMAKIF 633
LN K+ DFG +
Sbjct: 178 --LNRGELKLIDFGSGALL 194
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 452 IAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAV 510
+A L A N L L +E + +Q+ LG GGFG VY G R+ D +A+
Sbjct: 9 LAHLRAAPCN--DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 66
Query: 511 KRLSKASGQGLEEFMN------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR 562
K + K E N EV+++ K+ ++RLL + +LI E P
Sbjct: 67 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEP 125
Query: 563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLD 617
D LFD + +R + E ++R + + ++HRD+K NIL+D
Sbjct: 126 VQD--LFDFIT-------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 176
Query: 618 EELNP---KISDFGMAKIF 633
LN K+ DFG +
Sbjct: 177 --LNRGELKLIDFGSGALL 193
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 452 IAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAV 510
+A L A N L L +E + +Q+ LG GGFG VY G R+ D +A+
Sbjct: 10 LAHLRAAPCN--DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 67
Query: 511 KRLSKASGQGLEEFMN------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR 562
K + K E N EV+++ K+ ++RLL + +LI E P
Sbjct: 68 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEP 126
Query: 563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLD 617
D LFD + +R + E ++R + + ++HRD+K NIL+D
Sbjct: 127 VQD--LFDFIT-------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 177
Query: 618 EELNP---KISDFGMAKIF 633
LN K+ DFG +
Sbjct: 178 --LNRGELKLIDFGSGALL 194
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 452 IAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAV 510
+A L A N L L +E + +Q+ LG GGFG VY G R+ D +A+
Sbjct: 9 LAHLRAAPCN--DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 66
Query: 511 KRLSKASGQGLEEFMN------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR 562
K + K E N EV+++ K+ ++RLL + +LI E P
Sbjct: 67 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEP 125
Query: 563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLD 617
D LFD + +R + E ++R + + ++HRD+K NIL+D
Sbjct: 126 VQD--LFDFIT-------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 176
Query: 618 EELNP---KISDFGMAKIF 633
LN K+ DFG +
Sbjct: 177 --LNRGELKLIDFGSGALL 193
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRL-SKASGQGLEEFMNEVMVI 531
E ++ + +LG+G +G V R + GQ AVKR+ + + Q + + ++ +
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDIS 86
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK-ERLDWRKRFNIIEGIS 590
+ + E + I + + SLD + K + + I I
Sbjct: 87 XRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 146
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
+ L +LH S+L +IHRD+K SN+L++ K DFG++
Sbjct: 147 KALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 452 IAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAV 510
+A L A N L L +E + +Q+ LG GGFG VY G R+ D +A+
Sbjct: 10 LAHLRAAPCN--DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 67
Query: 511 KRLSKASGQGLEEFMN------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR 562
K + K E N EV+++ K+ ++RLL + +LI E P
Sbjct: 68 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEP 126
Query: 563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLD 617
D LFD + +R + E ++R + + ++HRD+K NIL+D
Sbjct: 127 VQD--LFDFIT-------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 177
Query: 618 EELNP---KISDFGMAKIF 633
LN K+ DFG +
Sbjct: 178 --LNRGELKLIDFGSGALL 194
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 452 IAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAV 510
+A L A N L L +E + +Q+ LG GGFG VY G R+ D +A+
Sbjct: 9 LAHLRAAPCN--DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 66
Query: 511 KRLSKASGQGLEEFMN------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR 562
K + K E N EV+++ K+ ++RLL + +LI E P
Sbjct: 67 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEP 125
Query: 563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLD 617
D LFD + +R + E ++R + + ++HRD+K NIL+D
Sbjct: 126 VQD--LFDFIT-------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 176
Query: 618 EELNP---KISDFGMAKIF 633
LN K+ DFG +
Sbjct: 177 --LNRGELKLIDFGSGALL 193
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 452 IAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAV 510
+A L A N L L +E + +Q+ LG GGFG VY G R+ D +A+
Sbjct: 29 LAHLRAAPCN--DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 86
Query: 511 KRLSKASGQGLEEFMN------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR 562
K + K E N EV+++ K+ ++RLL + +LI E P
Sbjct: 87 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEP 145
Query: 563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLD 617
D LFD + +R + E ++R + + ++HRD+K NIL+D
Sbjct: 146 VQD--LFDFIT-------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 196
Query: 618 EELNP---KISDFGMAKIF 633
LN K+ DFG +
Sbjct: 197 --LNRGELKLIDFGSGALL 213
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 452 IAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAV 510
+A L A N L L +E + +Q+ LG GGFG VY G R+ D +A+
Sbjct: 9 LAHLRAAPCN--DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 66
Query: 511 KRLSKASGQGLEEFMN------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR 562
K + K E N EV+++ K+ ++RLL + +LI E P
Sbjct: 67 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEP 125
Query: 563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLD 617
D LFD + +R + E ++R + + ++HRD+K NIL+D
Sbjct: 126 VQD--LFDFIT-------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 176
Query: 618 EELNP---KISDFGMAKIF 633
LN K+ DFG +
Sbjct: 177 --LNRGELKLIDFGSGALL 193
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMN------ 526
+E + +Q+ LG GGFG VY G R+ D +A+K + K E N
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 527 EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYM-PNRSL-DALLFDPLKKERLDWRKR 582
EV+++ K+ ++RLL + +LI E M P + L D + +E L
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIF 633
+ ++E + + H ++HRD+K NIL+D LN K+ DFG +
Sbjct: 121 WQVLEAVR----HCH---NCGVLHRDIKDENILID--LNRGELKLIDFGSGALL 165
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 452 IAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAV 510
+A L A N L L +E + +Q+ LG GGFG VY G R+ D +A+
Sbjct: 24 LAHLRAAPCN--DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAI 81
Query: 511 KRLSKASGQGLEEFMN------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR 562
K + K E N EV+++ K+ ++RLL + +LI E P
Sbjct: 82 KHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEP 140
Query: 563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLD 617
D LFD + +R + E ++R + + ++HRD+K NIL+D
Sbjct: 141 VQD--LFDFIT-------ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 191
Query: 618 EELNP---KISDFGMAKIF 633
LN K+ DFG +
Sbjct: 192 --LNRGELKLIDFGSGALL 208
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 45/177 (25%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISK----LQ 535
+ FQ+ GQG FG V G+ K G +A+K++ + F N + I + L
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-----RFRNRELQIMQDLAVLH 77
Query: 536 HRNLVRLLGCCVEGEEK-------MLIYEYMPNRSLDALLFDPLKKERLDWRKR------ 582
H N+V+L E+ ++ EY+P D L + ++ +R
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP---------DTLHRCCRNYYRRQVAPPP 128
Query: 583 -------FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFGMAK 631
F +I I G L+L + + HRD+K N+L++E + K+ DFG AK
Sbjct: 129 ILIKVFLFQLIRSI--GCLHL---PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 32/184 (17%)
Query: 470 LFQ---FEELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFM 525
LFQ +E + +Q+ LG GGFG VY G R+ D +A+K + K E
Sbjct: 17 LFQGPHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 76
Query: 526 N------EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL 577
N EV+++ K+ ++RLL + +LI E P D LFD +
Sbjct: 77 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFIT---- 129
Query: 578 DWRKRFNIIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLDEELNP---KISDFGM 629
+R + E ++R + + ++HRD+K NIL+D LN K+ DFG
Sbjct: 130 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGS 184
Query: 630 AKIF 633
+
Sbjct: 185 GALL 188
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDAL-LFDPLKKERLDWRKRFN 584
E+ ++ +L+H+N+++L+ + EEK +Y M + D + ++R +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDV-LYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHG 113
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
+ GL YLH I+H+D+K N+LL KIS G+A+
Sbjct: 114 YFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAE 157
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMN------ 526
+E + +Q+ LG GGFG VY G R+ D +A+K + K E N
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 527 EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
EV+++ K+ ++RLL + +LI E P D LFD + +R
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFIT-------ERGA 125
Query: 585 IIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIF 633
+ E ++R + + ++HRD+K NIL+D LN K+ DFG +
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSGALL 180
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMN------ 526
+E + +Q+ LG GGFG VY G R+ D +A+K + K E N
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 527 EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
EV+++ K+ ++RLL + +LI E P D LFD + +R
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFIT-------ERGA 110
Query: 585 IIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIF 633
+ E ++R + + ++HRD+K NIL+D LN K+ DFG +
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSGALL 165
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMN------EVMVISK 533
+ +Q+ LG GGFG VY G R+ D +A+K + K E N EV+++ K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 534 LQH--RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
+ ++RLL + +LI E P D LFD + +R + E ++R
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFIT-------ERGALQEELAR 113
Query: 592 GLLY-----LHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIF 633
+ + ++HRD+K NIL+D LN K+ DFG +
Sbjct: 114 SFFWQVLEAVRHCHNXGVLHRDIKDENILID--LNRGELKLIDFGSGALL 161
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMN------ 526
+E + +Q+ LG GGFG VY G R+ D +A+K + K E N
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 527 EVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
EV+++ K+ ++RLL + +LI E P D LFD + +R
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LFDFIT-------ERGA 126
Query: 585 IIEGISRGLLY-----LHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIF 633
+ E ++R + + ++HRD+K NIL+D LN K+ DFG +
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSGALL 181
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,401,938
Number of Sequences: 62578
Number of extensions: 887038
Number of successful extensions: 3636
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 1840
Number of HSP's gapped (non-prelim): 1113
length of query: 649
length of database: 14,973,337
effective HSP length: 105
effective length of query: 544
effective length of database: 8,402,647
effective search space: 4571039968
effective search space used: 4571039968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)