BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006348
         (649 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8CIV2|MBRL_MOUSE Membralin OS=Mus musculus GN=ORF61 PE=1 SV=2
          Length = 574

 Score =  120 bits (300), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 37/334 (11%)

Query: 236 YTMEKGYFLLPEADKSRHNIRTFNISIS-AQHPCFGNRWQQLLINRFVGYDTILMNSLL- 293
           Y++E G+  L +A + R +I    +++   +  CFG+R+ +LL++ F+GYD ILM+S+  
Sbjct: 204 YSLEYGFLRLSQATRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKG 263

Query: 294 ---HTPGQGYLYNCQTKEFYNLSYAQEPPEGPAKFGDYLVTKCGVLMMSLFVFFTTTMSV 350
              +   +G+L N  + E Y             +F    + +   L  +  +    T+SV
Sbjct: 264 LAENEENKGFLRNVVSGEHY-------------RFVSMWMARTSYLA-AFVIMVIFTLSV 309

Query: 351 SFTLRETQARMLKFTVQLQHHAQHRLPTFQLIFVHVIESLVFVPIMIGILFFLFEFYDDQ 410
           S  LR +  ++  F V L    +  +     I       L  +  ++G+   + EF++D 
Sbjct: 310 SMLLRYSHHQIFVFIVDLLQMLEMNM----AIAFPAAPLLTVILALVGMEAIMSEFFNDT 365

Query: 411 LLAFLVLILVWLCELFTLISCSVRTPISMKFFPRFFLLYFLVFHIYFFSYAYGFSYMALG 470
             AF +++ VWL + +  I C   T  S + + RFF LY   F+ Y + +   +S +AL 
Sbjct: 366 TTAFYIILTVWLADQYDAICCHTNT--SKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALV 423

Query: 471 TAAAFVQHLILYFWNHFEVPALQRFIQNRRTQ--LQQQPDFHITSSTILASTLHITRLNT 528
           T+  F+QH ++YF++H+E+PA+   +Q  R Q  L Q P     + T L   L+    N+
Sbjct: 424 TSWLFIQHSMIYFFHHYELPAI---LQQIRIQEMLLQTPPLGPGTPTALPDDLNN---NS 477

Query: 529 RNPSLPNTDATSGPGLRPGSNQAMPPTNRVDAPG 562
            +P+ P+      P L  G + +  PT     PG
Sbjct: 478 GSPATPD----PSPPLALGPSSSPAPTGGASGPG 507


>sp|Q4ZIN3|MBRL_HUMAN Membralin OS=Homo sapiens GN=C19orf6 PE=1 SV=1
          Length = 620

 Score =  117 bits (293), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 162/336 (48%), Gaps = 41/336 (12%)

Query: 236 YTMEKGYFLLPEADKSRHNIRTFNISIS-AQHPCFGNRWQQLLINRFVGYDTILMNSLL- 293
           Y++E G+  L +A + R +I    +++   +  CFG+R+ +LL++ F+GYD ILM+S+  
Sbjct: 213 YSLEYGFLRLSQATRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKG 272

Query: 294 ---HTPGQGYLYNCQTKEFYNLSYAQEPPEGPAKFGDYLVTKCGVLM-MSLFVFFTTTMS 349
              +   +G+L N  + E Y             +F    + +   L   ++ V FT  +S
Sbjct: 273 LAENEENKGFLRNVVSGEHY-------------RFVSMWMARTSYLAAFAIMVIFT--LS 317

Query: 350 VSFTLRETQARMLKFTVQLQHHAQHRLPTFQLIFVHVIESLVFVPIMIGILFFLFEFYDD 409
           VS  LR +  ++  F V L    +  +     I       L  +  ++G+   + EF++D
Sbjct: 318 VSMLLRYSHHQIFVFIVDLLQMLEMNM----AIAFPAAPLLTVILALVGMEAIMSEFFND 373

Query: 410 QLLAFLVLILVWLCELFTLISCSVRTPISMKFFPRFFLLYFLVFHIYFFSYAYGFSYMAL 469
              AF ++++VWL + +  I C   T  S + + RFF LY   F+ Y + +   +S +AL
Sbjct: 374 TTTAFYIILIVWLADQYDAICCHTST--SKRHWLRFFYLYHFAFYAYHYRFNGQYSSLAL 431

Query: 470 GTAAAFVQHLILYFWNHFEVPALQRFIQNRRTQ--LQQQPDFHITSSTILASTLHITRLN 527
            T+  F+QH ++YF++H+E+PA+   +Q  R Q  L Q P     + T L   ++    N
Sbjct: 432 VTSWLFIQHSMIYFFHHYELPAI---LQQVRIQEMLLQAPPLGPGTPTALPDDMNN---N 485

Query: 528 TRNPSLPNTDATSGPGLRPGSNQAMPPTNRVDAPGP 563
           +  P+     A   P L P S  A        +PGP
Sbjct: 486 SGAPATAPDSAGQPPALGPVSPGA------SGSPGP 515


>sp|O15021|MAST4_HUMAN Microtubule-associated serine/threonine-protein kinase 4 OS=Homo
            sapiens GN=MAST4 PE=1 SV=3
          Length = 2626

 Score = 34.7 bits (78), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 504  QQQPDFHITSSTILASTL-------HITRLNTRNPSLPNTDATSGPGLRPGSNQA 551
            Q++P+    +STI +STL       H+ ++N R+  + +TD +S P   P S+ A
Sbjct: 1016 QEEPEVTTPASTISSSTLSVGSFSEHLDQINGRSECVDSTDNSSKPSSEPASHMA 1070


>sp|Q7Z5P9|MUC19_HUMAN Mucin-19 OS=Homo sapiens GN=MUC19 PE=1 SV=2
          Length = 6254

 Score = 33.5 bits (75), Expect = 5.6,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 497  QNRRTQLQQQPDFHITSST---ILASTLHITRLNTRNPSLPNTDATSGPGLRPGSNQAMP 553
            Q  R+ ++    F  T +T   +   T  +   NT +PS  NT+ATSG   RP     + 
Sbjct: 5753 QGTRSTIEATTSFRGTGTTGSGMNTGTTGVVSGNTISPSSFNTEATSGTSERPNPGSEIG 5812

Query: 554  PTNRVD----APGPERSENNNPDRVGNTME 579
             T  V     APG   +E       G T E
Sbjct: 5813 TTGIVSGTTVAPGSSNTEATTSLGNGGTTE 5842


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.137    0.421 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 238,696,873
Number of Sequences: 539616
Number of extensions: 10058903
Number of successful extensions: 32756
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 32692
Number of HSP's gapped (non-prelim): 89
length of query: 649
length of database: 191,569,459
effective HSP length: 124
effective length of query: 525
effective length of database: 124,657,075
effective search space: 65444964375
effective search space used: 65444964375
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)