Query 006354
Match_columns 649
No_of_seqs 294 out of 2578
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 22:03:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006354.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006354hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1180 Acyl-CoA synthetase [L 100.0 2.4E-98 5E-103 754.2 47.3 554 58-622 20-576 (678)
2 KOG1256 Long-chain acyl-CoA sy 100.0 9.1E-87 2E-91 702.8 47.0 524 58-622 53-588 (691)
3 PLN02387 long-chain-fatty-acid 100.0 2.5E-82 5.4E-87 720.4 59.0 559 60-624 40-599 (696)
4 COG1022 FAA1 Long-chain acyl-C 100.0 3.1E-78 6.7E-83 649.4 45.6 497 79-629 13-517 (613)
5 PTZ00342 acyl-CoA synthetase; 100.0 6.1E-77 1.3E-81 671.4 52.9 513 58-621 43-630 (746)
6 PLN02614 long-chain acyl-CoA s 100.0 5.3E-76 1.2E-80 665.3 55.4 529 58-626 25-562 (666)
7 PLN02861 long-chain-fatty-acid 100.0 4.8E-75 1.1E-79 658.0 56.1 521 58-620 23-552 (660)
8 PLN02736 long-chain acyl-CoA s 100.0 8.8E-75 1.9E-79 656.9 54.5 504 78-619 40-545 (651)
9 PTZ00216 acyl-CoA synthetase; 100.0 4.3E-73 9.3E-78 646.3 56.0 517 78-619 65-596 (700)
10 PLN02430 long-chain-fatty-acid 100.0 7.6E-73 1.6E-77 638.9 55.4 522 58-619 22-551 (660)
11 KOG1177 Long chain fatty acid 100.0 4.4E-70 9.5E-75 541.2 32.7 454 81-635 49-534 (596)
12 KOG1176 Acyl-CoA synthetase [L 100.0 3.1E-69 6.7E-74 575.8 36.1 428 130-635 45-481 (537)
13 COG0318 CaiC Acyl-CoA syntheta 100.0 2.9E-67 6.2E-72 580.0 41.4 455 80-636 9-475 (534)
14 COG0365 Acs Acyl-coenzyme A sy 100.0 1.2E-67 2.6E-72 560.4 33.9 452 86-638 13-472 (528)
15 PRK07529 AMP-binding domain pr 100.0 7.5E-64 1.6E-68 565.3 44.5 477 82-632 25-515 (632)
16 PRK12467 peptide synthase; Pro 100.0 6.8E-66 1.5E-70 671.7 31.1 488 8-620 3033-3529(3956)
17 PTZ00237 acetyl-CoA synthetase 100.0 4.2E-64 9.1E-69 567.5 40.6 483 81-634 58-564 (647)
18 PLN02860 o-succinylbenzoate-Co 100.0 5.4E-64 1.2E-68 560.4 41.0 451 81-632 6-484 (563)
19 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 2.3E-63 5E-68 562.2 42.0 470 82-633 57-546 (625)
20 PRK07788 acyl-CoA synthetase; 100.0 2.7E-63 5.9E-68 553.7 41.2 445 82-632 49-497 (549)
21 PLN02654 acetate-CoA ligase 100.0 3.6E-63 7.8E-68 561.7 41.3 475 82-634 88-585 (666)
22 PRK00174 acetyl-CoA synthetase 100.0 9.6E-63 2.1E-67 558.1 43.1 467 83-632 68-553 (637)
23 PRK12467 peptide synthase; Pro 100.0 2.6E-64 5.6E-69 656.8 34.6 491 8-619 1512-2011(3956)
24 PRK06334 long chain fatty acid 100.0 8.7E-63 1.9E-67 546.9 41.7 436 81-622 18-476 (539)
25 TIGR02316 propion_prpE propion 100.0 7.8E-63 1.7E-67 557.3 41.9 472 82-633 52-543 (628)
26 PRK05691 peptide synthase; Val 100.0 2.9E-64 6.4E-69 662.1 35.1 492 8-619 3658-4159(4334)
27 PRK08180 feruloyl-CoA synthase 100.0 1.8E-62 3.9E-67 552.9 44.5 452 81-628 38-513 (614)
28 PRK12582 acyl-CoA synthetase; 100.0 3E-62 6.4E-67 552.2 45.1 455 79-627 46-524 (624)
29 PRK12316 peptide synthase; Pro 100.0 7E-64 1.5E-68 662.8 33.7 491 8-621 1941-2440(5163)
30 TIGR03443 alpha_am_amid L-amin 100.0 1.8E-63 3.9E-68 610.4 34.5 525 8-629 175-745 (1389)
31 PRK10252 entF enterobactin syn 100.0 2.3E-63 5E-68 607.3 34.3 487 8-618 398-893 (1296)
32 PRK12316 peptide synthase; Pro 100.0 3.1E-63 6.8E-68 656.6 37.2 486 8-622 2995-3484(5163)
33 PRK13295 cyclohexanecarboxylat 100.0 6.9E-61 1.5E-65 533.9 43.2 447 82-631 24-488 (547)
34 COG1021 EntE Peptide arylation 100.0 2.5E-63 5.3E-68 482.2 20.3 449 80-636 26-488 (542)
35 PRK04319 acetyl-CoA synthetase 100.0 2.4E-61 5.2E-66 540.1 38.6 451 81-631 42-501 (570)
36 PRK08314 long-chain-fatty-acid 100.0 5.3E-61 1.2E-65 535.3 40.6 462 82-631 10-485 (546)
37 PRK13382 acyl-CoA synthetase; 100.0 5.7E-61 1.2E-65 532.9 40.7 440 82-632 43-486 (537)
38 PRK07769 long-chain-fatty-acid 100.0 5.7E-61 1.2E-65 543.0 41.2 450 79-620 18-524 (631)
39 PRK10524 prpE propionyl-CoA sy 100.0 8.9E-61 1.9E-65 541.5 42.7 473 82-633 53-544 (629)
40 PRK09274 peptide synthase; Pro 100.0 5.9E-61 1.3E-65 535.4 40.2 456 82-622 6-480 (552)
41 PRK05677 long-chain-fatty-acid 100.0 1.6E-60 3.4E-65 532.5 43.2 459 82-632 24-503 (562)
42 PRK05691 peptide synthase; Val 100.0 4.6E-62 1E-66 641.4 35.2 489 8-622 1071-1565(4334)
43 PLN02246 4-coumarate--CoA liga 100.0 6.8E-60 1.5E-64 524.9 44.3 449 77-627 18-477 (537)
44 PRK06060 acyl-CoA synthetase; 100.0 7.4E-61 1.6E-65 548.3 37.5 423 83-630 5-433 (705)
45 PRK05857 acyl-CoA synthetase; 100.0 1.7E-60 3.6E-65 529.5 36.1 443 81-628 13-468 (540)
46 PRK12476 putative fatty-acid-- 100.0 3.8E-60 8.3E-65 534.1 39.2 459 77-630 29-545 (612)
47 TIGR01217 ac_ac_CoA_syn acetoa 100.0 8.7E-60 1.9E-64 533.3 41.3 459 94-634 96-571 (652)
48 PRK05852 acyl-CoA synthetase; 100.0 5.1E-60 1.1E-64 525.5 38.7 457 77-630 11-476 (534)
49 PLN02574 4-coumarate--CoA liga 100.0 3.9E-60 8.5E-65 528.9 37.8 443 84-629 43-497 (560)
50 PRK03584 acetoacetyl-CoA synth 100.0 1.4E-59 3.1E-64 533.6 42.3 466 83-633 87-569 (655)
51 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3.3E-59 7.1E-64 519.5 44.2 446 82-630 22-485 (538)
52 PRK06155 crotonobetaine/carnit 100.0 2.2E-59 4.7E-64 520.6 42.2 441 81-628 20-466 (542)
53 PRK07656 long-chain-fatty-acid 100.0 3E-59 6.6E-64 517.3 42.6 447 82-629 5-459 (513)
54 PRK08008 caiC putative crotono 100.0 3.6E-59 7.9E-64 517.0 41.5 455 81-630 6-466 (517)
55 PRK03640 O-succinylbenzoic aci 100.0 4.4E-59 9.6E-64 512.0 41.5 419 82-627 2-425 (483)
56 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 3.6E-59 7.9E-64 517.9 40.8 445 80-631 21-477 (527)
57 PRK06839 acyl-CoA synthetase; 100.0 3.3E-59 7E-64 514.8 40.0 431 83-631 3-440 (496)
58 PLN03102 acyl-activating enzym 100.0 6.4E-59 1.4E-63 520.4 41.7 451 82-632 14-490 (579)
59 PRK07638 acyl-CoA synthetase; 100.0 4E-59 8.6E-64 512.7 38.8 424 82-630 1-429 (487)
60 PRK08043 bifunctional acyl-[ac 100.0 1.9E-59 4.2E-64 536.9 37.7 440 80-629 202-658 (718)
61 PRK07470 acyl-CoA synthetase; 100.0 7.2E-59 1.6E-63 515.9 40.0 446 81-628 6-460 (528)
62 PRK07786 long-chain-fatty-acid 100.0 8.3E-59 1.8E-63 516.6 40.2 445 81-627 16-464 (542)
63 PLN02330 4-coumarate--CoA liga 100.0 6.7E-59 1.5E-63 517.8 39.4 448 79-630 25-485 (546)
64 PLN03052 acetate--CoA ligase; 100.0 2.6E-58 5.7E-63 523.4 43.8 465 85-633 178-662 (728)
65 PTZ00297 pantothenate kinase; 100.0 6.9E-58 1.5E-62 535.1 47.9 474 76-627 421-902 (1452)
66 PRK06087 short chain acyl-CoA 100.0 2.5E-58 5.3E-63 513.7 42.2 447 81-631 22-479 (547)
67 PRK05620 long-chain-fatty-acid 100.0 3.2E-58 6.9E-63 515.5 43.0 463 82-629 10-497 (576)
68 PRK08315 AMP-binding domain pr 100.0 2.1E-58 4.6E-63 515.9 41.3 447 81-628 15-493 (559)
69 PRK05605 long-chain-fatty-acid 100.0 1.9E-58 4.2E-63 517.3 41.0 458 82-630 32-513 (573)
70 TIGR03098 ligase_PEP_1 acyl-Co 100.0 4.1E-58 8.9E-63 508.5 42.8 451 83-631 1-463 (515)
71 PRK06187 long-chain-fatty-acid 100.0 3.3E-58 7.1E-63 510.0 41.2 453 81-632 5-465 (521)
72 PRK12492 long-chain-fatty-acid 100.0 3.4E-58 7.4E-63 513.7 41.4 462 80-630 22-509 (562)
73 PRK05851 long-chain-fatty-acid 100.0 4.5E-59 9.7E-64 516.3 33.8 427 83-626 3-459 (525)
74 PRK08633 2-acyl-glycerophospho 100.0 1.6E-58 3.5E-63 559.0 41.6 455 79-631 612-1090(1146)
75 PRK08316 acyl-CoA synthetase; 100.0 4E-58 8.7E-63 509.6 41.0 450 81-630 10-463 (523)
76 PRK07514 malonyl-CoA synthase; 100.0 7.5E-58 1.6E-62 505.0 42.3 436 82-627 3-442 (504)
77 PRK07008 long-chain-fatty-acid 100.0 7.5E-58 1.6E-62 508.4 42.1 455 82-630 10-477 (539)
78 PRK12583 acyl-CoA synthetase; 100.0 1.1E-57 2.3E-62 510.2 40.9 446 82-629 18-495 (558)
79 PRK06164 acyl-CoA synthetase; 100.0 1.8E-57 3.9E-62 506.1 40.1 445 78-620 6-464 (540)
80 PRK06145 acyl-CoA synthetase; 100.0 2.1E-57 4.5E-62 500.5 39.9 432 82-629 2-440 (497)
81 TIGR02262 benz_CoA_lig benzoat 100.0 3.9E-57 8.4E-62 499.6 41.9 442 82-626 4-448 (508)
82 PRK07867 acyl-CoA synthetase; 100.0 2.7E-57 5.9E-62 502.0 40.5 431 81-633 4-452 (529)
83 PRK10946 entE enterobactin syn 100.0 2.4E-57 5.1E-62 504.0 39.4 442 81-630 24-477 (536)
84 PRK06188 acyl-CoA synthetase; 100.0 5.8E-57 1.2E-61 500.2 40.4 440 81-629 11-460 (524)
85 PRK13388 acyl-CoA synthetase; 100.0 3.1E-57 6.7E-62 503.1 38.1 426 82-627 3-445 (540)
86 PRK06018 putative acyl-CoA syn 100.0 1E-56 2.2E-61 499.9 42.1 456 82-630 10-478 (542)
87 TIGR03205 pimA dicarboxylate-- 100.0 1.7E-56 3.7E-61 498.1 43.9 454 81-627 20-486 (541)
88 PRK08279 long-chain-acyl-CoA s 100.0 4.8E-57 1E-61 508.5 39.8 468 50-622 8-499 (600)
89 PRK07059 Long-chain-fatty-acid 100.0 1E-56 2.3E-61 501.6 41.8 460 81-630 22-503 (557)
90 PLN02479 acetate-CoA ligase 100.0 1.7E-56 3.6E-61 500.4 42.2 451 82-626 20-494 (567)
91 PF00501 AMP-binding: AMP-bind 100.0 3.9E-57 8.5E-62 487.0 33.8 406 88-589 1-417 (417)
92 PRK06178 acyl-CoA synthetase; 100.0 3.5E-56 7.6E-61 498.4 42.5 458 82-631 33-511 (567)
93 PRK09088 acyl-CoA synthetase; 100.0 9.8E-57 2.1E-61 493.9 37.3 417 89-626 2-425 (488)
94 PRK08751 putative long-chain f 100.0 1.9E-56 4.2E-61 499.9 39.9 459 81-629 24-504 (560)
95 PRK13383 acyl-CoA synthetase; 100.0 3.2E-56 7E-61 493.0 39.3 426 81-631 34-465 (516)
96 PRK13390 acyl-CoA synthetase; 100.0 2.6E-56 5.7E-61 492.1 37.7 434 90-631 5-448 (501)
97 PRK06710 long-chain-fatty-acid 100.0 4.7E-56 1E-60 497.0 38.3 460 82-631 24-500 (563)
98 PRK07787 acyl-CoA synthetase; 100.0 6E-56 1.3E-60 485.1 36.2 404 91-630 9-419 (471)
99 TIGR01734 D-ala-DACP-lig D-ala 100.0 9.3E-56 2E-60 488.0 37.1 424 83-619 1-430 (502)
100 PRK06814 acylglycerophosphoeth 100.0 2.4E-55 5.2E-60 529.5 42.7 443 81-629 630-1077(1140)
101 PRK08974 long-chain-fatty-acid 100.0 5.1E-55 1.1E-59 488.3 42.0 459 81-629 22-499 (560)
102 PRK05850 acyl-CoA synthetase; 100.0 1.4E-55 3E-60 494.7 37.0 451 83-629 2-501 (578)
103 PRK08162 acyl-CoA synthetase; 100.0 1.4E-54 3E-59 483.5 42.6 450 82-630 18-484 (545)
104 PRK09192 acyl-CoA synthetase; 100.0 1.8E-55 3.9E-60 493.3 35.6 443 75-622 14-500 (579)
105 PRK04813 D-alanine--poly(phosp 100.0 6.5E-55 1.4E-59 481.5 38.9 428 82-624 2-437 (503)
106 PRK13391 acyl-CoA synthetase; 100.0 1.2E-54 2.5E-59 480.1 40.8 437 89-629 4-449 (511)
107 PRK07868 acyl-CoA synthetase; 100.0 2.6E-55 5.7E-60 514.7 37.1 461 43-622 417-896 (994)
108 PRK09029 O-succinylbenzoic aci 100.0 4.9E-55 1.1E-59 476.3 36.0 391 89-631 10-400 (458)
109 PRK07798 acyl-CoA synthetase; 100.0 7.6E-54 1.7E-58 476.4 44.1 453 82-629 3-475 (533)
110 PRK07445 O-succinylbenzoic aci 100.0 7.2E-55 1.6E-59 472.1 34.6 371 131-631 20-393 (452)
111 PRK08276 long-chain-fatty-acid 100.0 2.3E-53 4.9E-58 468.9 37.1 418 130-632 11-439 (502)
112 KOG1175 Acyl-CoA synthetase [L 100.0 3.8E-54 8.3E-59 457.3 29.4 461 85-637 67-550 (626)
113 PRK07768 long-chain-fatty-acid 100.0 2E-53 4.3E-58 474.1 36.1 429 82-619 2-471 (545)
114 PRK12406 long-chain-fatty-acid 100.0 8.2E-53 1.8E-57 465.2 38.3 430 129-630 10-447 (509)
115 PLN03051 acyl-activating enzym 100.0 1.6E-53 3.5E-58 468.7 31.7 402 162-631 1-428 (499)
116 TIGR01733 AA-adenyl-dom amino 100.0 1.4E-52 2.9E-57 450.3 35.5 397 132-615 1-408 (408)
117 TIGR01923 menE O-succinylbenzo 100.0 2.6E-52 5.7E-57 452.2 34.7 384 132-627 1-385 (436)
118 KOG1179 Very long-chain acyl-C 100.0 1.7E-50 3.7E-55 410.1 33.0 444 81-622 76-548 (649)
119 PRK08308 acyl-CoA synthetase; 100.0 1.3E-50 2.8E-55 435.4 33.7 348 130-630 8-359 (414)
120 COG1020 EntF Non-ribosomal pep 100.0 3.7E-48 8E-53 440.0 30.0 470 8-607 169-642 (642)
121 PRK07824 O-succinylbenzoic aci 100.0 2.4E-38 5.2E-43 333.5 21.8 270 271-631 31-302 (358)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 1.6E-31 3.5E-36 280.7 21.6 230 275-618 95-331 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 3.8E-31 8.3E-36 284.6 19.2 267 273-619 73-352 (422)
124 KOG3628 Predicted AMP-binding 100.0 1.4E-28 3.1E-33 265.3 31.2 454 82-619 770-1287(1363)
125 KOG1178 Non-ribosomal peptide 99.9 3.2E-26 7E-31 255.8 15.7 466 82-634 36-526 (1032)
126 TIGR03335 F390_ftsA coenzyme F 99.9 2.3E-25 4.9E-30 240.1 19.2 258 273-610 84-359 (445)
127 TIGR03089 conserved hypothetic 99.9 1.9E-24 4.1E-29 210.5 20.7 221 88-374 2-227 (227)
128 COG1541 PaaK Coenzyme F390 syn 99.9 1E-20 2.2E-25 193.8 18.8 262 271-610 86-360 (438)
129 KOG3628 Predicted AMP-binding 99.8 1.6E-18 3.5E-23 188.3 17.3 451 81-618 93-637 (1363)
130 TIGR02304 aden_form_hyp probab 99.5 4.9E-13 1.1E-17 141.2 17.8 248 278-619 102-367 (430)
131 PRK09188 serine/threonine prot 99.2 1.8E-11 3.9E-16 126.5 4.7 65 560-632 209-277 (365)
132 PF04443 LuxE: Acyl-protein sy 98.6 1.4E-06 3E-11 90.4 18.0 237 273-585 87-351 (365)
133 PF03321 GH3: GH3 auxin-respon 97.8 0.0001 2.2E-09 81.0 11.0 149 442-618 264-434 (528)
134 PLN02249 indole-3-acetic acid- 97.8 0.002 4.4E-08 71.1 19.8 138 441-605 298-456 (597)
135 PLN02247 indole-3-acetic acid- 97.6 0.0023 4.9E-08 70.2 17.6 142 441-605 289-463 (606)
136 PLN02620 indole-3-acetic acid- 97.5 0.0073 1.6E-07 66.2 19.4 142 441-605 300-469 (612)
137 PF13193 AMP-binding_C: AMP-bi 95.6 0.0018 4E-08 50.5 -1.4 34 598-632 1-34 (73)
138 COG1541 PaaK Coenzyme F390 syn 94.0 0.68 1.5E-05 48.9 12.1 92 129-221 108-201 (438)
139 TIGR02155 PA_CoA_ligase phenyl 88.2 5.4 0.00012 42.8 12.1 88 130-218 94-183 (422)
140 TIGR03335 F390_ftsA coenzyme F 87.9 6.2 0.00013 42.8 12.4 86 129-217 104-191 (445)
141 PRK07656 long-chain-fatty-acid 77.2 33 0.00071 37.6 13.1 87 129-219 184-272 (513)
142 PF00501 AMP-binding: AMP-bind 75.0 48 0.001 35.1 13.3 120 95-234 153-287 (417)
143 TIGR01733 AA-adenyl-dom amino 69.5 1.1E+02 0.0023 32.2 14.4 103 128-233 137-243 (408)
144 PRK06334 long chain fatty acid 68.0 1.2E+02 0.0026 33.7 14.8 101 128-231 200-306 (539)
145 PRK12583 acyl-CoA synthetase; 67.8 75 0.0016 35.3 13.2 86 129-217 219-306 (558)
146 TIGR01923 menE O-succinylbenzo 67.4 59 0.0013 34.7 11.9 98 128-231 128-226 (436)
147 PRK06187 long-chain-fatty-acid 66.4 57 0.0012 35.7 11.8 87 129-219 185-272 (521)
148 PRK04319 acetyl-CoA synthetase 64.8 1.2E+02 0.0027 33.8 14.2 87 129-218 223-311 (570)
149 PLN03051 acyl-activating enzym 64.3 72 0.0016 35.0 12.0 87 129-218 137-224 (499)
150 PRK08308 acyl-CoA synthetase; 64.1 1.6E+02 0.0036 31.1 14.5 99 129-231 119-219 (414)
151 PRK08315 AMP-binding domain pr 59.2 69 0.0015 35.6 10.9 86 129-217 217-304 (559)
152 TIGR03089 conserved hypothetic 58.7 40 0.00087 32.6 7.7 54 148-203 171-226 (227)
153 PRK07638 acyl-CoA synthetase; 58.4 1.1E+02 0.0024 33.2 12.2 87 129-219 161-248 (487)
154 PF14535 AMP-binding_C_2: AMP- 56.4 3.1 6.6E-05 34.2 -0.5 25 591-616 1-25 (96)
155 PLN02860 o-succinylbenzoate-Co 55.9 2E+02 0.0044 32.0 13.9 86 129-218 190-276 (563)
156 TIGR03098 ligase_PEP_1 acyl-Co 54.9 1.3E+02 0.0027 32.9 12.0 87 128-218 178-265 (515)
157 PRK03584 acetoacetyl-CoA synth 53.2 1.8E+02 0.004 33.1 13.2 70 149-218 299-371 (655)
158 PRK07008 long-chain-fatty-acid 51.1 1.7E+02 0.0037 32.4 12.2 88 129-218 194-283 (539)
159 KOG1177 Long chain fatty acid 49.5 3.4E+02 0.0074 29.4 12.8 87 127-216 250-338 (596)
160 PRK07788 acyl-CoA synthetase; 49.4 1.2E+02 0.0025 33.7 10.6 98 130-231 226-330 (549)
161 PRK08043 bifunctional acyl-[ac 49.0 2.8E+02 0.006 32.1 14.0 86 129-217 383-470 (718)
162 COG4009 Uncharacterized protei 47.5 69 0.0015 24.9 5.5 65 131-206 10-77 (88)
163 COG0399 WecE Predicted pyridox 47.3 79 0.0017 33.2 8.0 78 140-221 59-146 (374)
164 PLN03052 acetate--CoA ligase; 46.9 1.9E+02 0.0042 33.6 12.1 86 130-218 375-461 (728)
165 PF01041 DegT_DnrJ_EryC1: DegT 46.9 50 0.0011 34.6 6.7 64 141-208 51-119 (363)
166 PRK13295 cyclohexanecarboxylat 46.5 3.9E+02 0.0086 29.5 14.3 86 129-218 215-302 (547)
167 PRK05852 acyl-CoA synthetase; 44.3 2.9E+02 0.0063 30.4 12.8 88 129-219 194-284 (534)
168 PRK08316 acyl-CoA synthetase; 44.2 2.1E+02 0.0045 31.3 11.5 87 128-218 188-276 (523)
169 PRK06164 acyl-CoA synthetase; 43.8 2.5E+02 0.0055 30.9 12.2 86 129-218 199-285 (540)
170 TIGR02379 ECA_wecE TDP-4-keto- 43.7 87 0.0019 33.0 7.9 61 144-208 60-125 (376)
171 PLN02565 cysteine synthase 43.3 2.7E+02 0.0058 28.6 11.2 66 146-211 56-122 (322)
172 PLN02654 acetate-CoA ligase 43.2 3.6E+02 0.0078 30.9 13.5 70 150-219 312-386 (666)
173 TIGR01217 ac_ac_CoA_syn acetoa 42.4 3E+02 0.0065 31.4 12.7 69 149-217 300-371 (652)
174 TIGR02316 propion_prpE propion 41.3 3.1E+02 0.0067 31.1 12.6 101 130-233 251-363 (628)
175 PRK06188 acyl-CoA synthetase; 40.9 2.9E+02 0.0063 30.2 12.1 86 129-218 186-271 (524)
176 cd01519 RHOD_HSP67B2 Member of 40.6 93 0.002 25.5 6.2 54 128-181 35-92 (106)
177 PRK03640 O-succinylbenzoic aci 40.1 2.8E+02 0.0061 29.9 11.7 86 129-218 159-245 (483)
178 PRK07529 AMP-binding domain pr 39.7 4.5E+02 0.0098 29.8 13.6 101 128-231 230-340 (632)
179 PRK11706 TDP-4-oxo-6-deoxy-D-g 39.6 1.2E+02 0.0025 31.9 8.2 59 146-208 62-125 (375)
180 cd01445 TST_Repeats Thiosulfat 39.3 93 0.002 27.4 6.2 43 141-183 81-126 (138)
181 PRK08314 long-chain-fatty-acid 39.0 3.1E+02 0.0068 30.1 12.0 85 129-217 208-294 (546)
182 PLN02246 4-coumarate--CoA liga 38.5 3.2E+02 0.0069 30.1 11.9 88 129-217 197-287 (537)
183 PRK10946 entE enterobactin syn 37.4 4.8E+02 0.01 28.7 13.1 86 129-218 200-288 (536)
184 PRK10252 entF enterobactin syn 36.5 5.2E+02 0.011 32.3 14.5 103 129-234 616-727 (1296)
185 PRK05620 long-chain-fatty-acid 36.4 4.2E+02 0.0092 29.5 12.6 88 129-217 199-287 (576)
186 PRK08633 2-acyl-glycerophospho 36.2 5E+02 0.011 31.9 14.2 87 129-218 800-888 (1146)
187 COG2236 Predicted phosphoribos 36.0 66 0.0014 30.2 4.9 32 129-160 5-36 (192)
188 TIGR00936 ahcY adenosylhomocys 36.0 3.2E+02 0.0069 29.1 10.5 79 143-221 20-104 (406)
189 TIGR02262 benz_CoA_lig benzoat 35.6 3.2E+02 0.0069 29.8 11.3 86 129-216 179-266 (508)
190 COG0318 CaiC Acyl-CoA syntheta 35.3 5.6E+02 0.012 28.3 13.2 91 128-219 188-281 (534)
191 PLN02556 cysteine synthase/L-3 35.0 4.3E+02 0.0093 27.7 11.4 62 149-210 103-165 (368)
192 TIGR02275 DHB_AMP_lig 2,3-dihy 35.0 6.4E+02 0.014 27.6 13.7 86 129-218 201-289 (527)
193 KOG1179 Very long-chain acyl-C 35.0 2.6E+02 0.0057 30.9 9.5 84 130-217 261-346 (649)
194 TIGR03590 PseG pseudaminic aci 34.5 2E+02 0.0043 28.8 8.6 97 131-236 12-113 (279)
195 cd01529 4RHOD_Repeats Member o 33.2 1.3E+02 0.0028 24.2 5.8 54 125-181 29-82 (96)
196 PF05452 Clavanin: Clavanin; 32.9 19 0.00041 26.7 0.6 11 556-566 69-79 (80)
197 PF00818 Ice_nucleation: Ice n 32.9 19 0.00041 18.6 0.4 10 476-485 1-10 (16)
198 PRK07470 acyl-CoA synthetase; 32.9 4.2E+02 0.0091 29.0 11.7 89 129-218 181-270 (528)
199 cd07050 BMC_EutL_repeat2 ethan 32.6 97 0.0021 24.2 4.3 42 144-185 3-45 (87)
200 PLN02736 long-chain acyl-CoA s 32.5 4.2E+02 0.0092 30.1 11.9 86 128-218 238-324 (651)
201 TIGR02372 4_coum_CoA_lig 4-cou 32.2 6.3E+02 0.014 26.6 15.8 118 82-219 80-201 (386)
202 COG0036 Rpe Pentose-5-phosphat 32.1 3.6E+02 0.0078 25.9 9.1 52 183-234 114-176 (220)
203 TIGR01139 cysK cysteine syntha 31.8 3.7E+02 0.0081 27.1 10.1 65 146-211 47-112 (298)
204 PRK13388 acyl-CoA synthetase; 31.7 7E+02 0.015 27.5 13.3 85 129-217 168-254 (540)
205 TIGR03208 cyc_hxne_CoA_lg cycl 31.7 7.2E+02 0.016 27.2 13.9 85 129-217 213-299 (538)
206 PF09269 DUF1967: Domain of un 31.7 31 0.00067 26.3 1.6 22 139-160 41-62 (69)
207 PRK07787 acyl-CoA synthetase; 31.6 5.9E+02 0.013 27.3 12.5 85 129-218 146-232 (471)
208 TIGR03443 alpha_am_amid L-amin 31.5 5.3E+02 0.012 32.6 13.5 103 129-234 433-539 (1389)
209 PRK08279 long-chain-acyl-CoA s 31.3 5.5E+02 0.012 28.7 12.5 86 129-218 217-304 (600)
210 PRK11761 cysM cysteine synthas 31.2 3.7E+02 0.0081 27.1 10.0 66 144-210 51-117 (296)
211 TIGR01734 D-ala-DACP-lig D-ala 30.7 6.1E+02 0.013 27.4 12.5 87 128-217 158-247 (502)
212 PRK11493 sseA 3-mercaptopyruva 30.3 86 0.0019 31.5 5.1 56 128-183 199-259 (281)
213 PF00290 Trp_syntA: Tryptophan 29.4 5.7E+02 0.012 25.3 10.7 67 131-202 93-164 (259)
214 TIGR03588 PseC UDP-4-keto-6-de 29.4 2.6E+02 0.0057 29.3 8.9 65 141-208 55-127 (380)
215 PLN03013 cysteine synthase 29.2 4E+02 0.0086 28.6 9.9 65 147-211 165-230 (429)
216 PRK06814 acylglycerophosphoeth 29.2 9.5E+02 0.021 29.5 14.9 87 129-218 811-899 (1140)
217 PRK13383 acyl-CoA synthetase; 28.7 4.9E+02 0.011 28.4 11.3 72 146-218 208-280 (516)
218 PRK11658 UDP-4-amino-4-deoxy-L 28.7 2.4E+02 0.0052 29.7 8.4 63 141-207 59-126 (379)
219 TIGR03595 Obg_CgtA_exten Obg f 28.6 43 0.00093 25.6 2.0 20 142-161 44-63 (69)
220 TIGR01136 cysKM cysteine synth 28.2 4.5E+02 0.0098 26.5 10.1 64 147-211 49-113 (299)
221 PLN02614 long-chain acyl-CoA s 28.2 5.5E+02 0.012 29.4 11.8 88 128-218 240-331 (666)
222 PRK06381 threonine synthase; V 27.5 2.5E+02 0.0054 28.7 8.1 56 159-214 66-121 (319)
223 PRK06060 acyl-CoA synthetase; 27.4 7.7E+02 0.017 28.3 13.0 104 129-234 163-270 (705)
224 PRK15407 lipopolysaccharide bi 26.9 2.2E+02 0.0048 30.7 7.8 56 150-209 106-166 (438)
225 PF01436 NHL: NHL repeat; Int 26.4 1.2E+02 0.0025 18.3 3.3 18 570-587 9-26 (28)
226 PRK09274 peptide synthase; Pro 26.1 8.1E+02 0.017 26.9 12.6 95 128-231 191-295 (552)
227 PTZ00237 acetyl-CoA synthetase 26.0 2.6E+02 0.0056 31.9 8.7 92 274-380 75-172 (647)
228 PLN02723 3-mercaptopyruvate su 26.0 1.3E+02 0.0028 30.9 5.6 57 129-185 237-299 (320)
229 cd01449 TST_Repeat_2 Thiosulfa 25.7 1.4E+02 0.0031 24.9 5.1 41 141-181 64-104 (118)
230 TIGR02188 Ac_CoA_lig_AcsA acet 25.4 9.5E+02 0.021 27.0 13.2 70 150-219 273-347 (625)
231 PRK07768 long-chain-fatty-acid 24.5 9.6E+02 0.021 26.3 13.1 85 129-216 170-260 (545)
232 PRK10524 prpE propionyl-CoA sy 24.4 9.9E+02 0.022 26.8 13.1 69 150-218 270-343 (629)
233 PRK06702 O-acetylhomoserine am 24.0 3.5E+02 0.0076 29.1 8.6 32 176-208 122-153 (432)
234 COG1064 AdhP Zn-dependent alco 23.8 4.3E+02 0.0092 27.4 8.6 61 146-210 158-218 (339)
235 PLN00011 cysteine synthase 23.8 6.2E+02 0.013 25.9 10.1 64 147-211 59-124 (323)
236 PRK08008 caiC putative crotono 23.6 8.7E+02 0.019 26.3 12.1 85 129-217 191-277 (517)
237 KOG0023 Alcohol dehydrogenase, 23.6 5.3E+02 0.011 26.5 8.9 78 146-226 173-250 (360)
238 PF03744 BioW: 6-carboxyhexano 23.5 90 0.002 30.3 3.5 20 523-542 171-191 (239)
239 PRK06839 acyl-CoA synthetase; 23.5 9.3E+02 0.02 25.8 13.2 86 129-218 167-254 (496)
240 PRK00174 acetyl-CoA synthetase 23.4 1.1E+03 0.023 26.6 13.1 70 150-219 282-356 (637)
241 PF06277 EutA: Ethanolamine ut 23.2 5.2E+02 0.011 28.0 9.3 69 82-173 353-426 (473)
242 KOG1176 Acyl-CoA synthetase [L 22.9 2.2E+02 0.0047 31.7 6.8 90 292-389 43-136 (537)
243 PRK10287 thiosulfate:cyanide s 22.8 3.6E+02 0.0079 22.3 6.7 54 125-185 37-90 (104)
244 PLN02861 long-chain-fatty-acid 22.5 7.7E+02 0.017 28.1 11.7 88 128-218 237-328 (660)
245 PRK06155 crotonobetaine/carnit 22.5 8.4E+02 0.018 26.8 11.8 85 129-217 198-283 (542)
246 PLN03102 acyl-activating enzym 22.3 3.3E+02 0.0072 30.4 8.5 96 273-386 27-125 (579)
247 cd00640 Trp-synth-beta_II Tryp 22.3 4.2E+02 0.0092 25.6 8.3 66 147-213 42-107 (244)
248 PF05221 AdoHcyase: S-adenosyl 22.2 5.6E+02 0.012 25.5 8.7 75 146-220 34-114 (268)
249 COG0365 Acs Acyl-coenzyme A sy 22.0 2.7E+02 0.0059 30.8 7.3 93 278-386 27-126 (528)
250 COG1424 BioW Pimeloyl-CoA synt 21.9 1E+02 0.0022 28.5 3.3 51 522-584 166-219 (239)
251 PRK07476 eutB threonine dehydr 21.8 6E+02 0.013 26.0 9.6 54 160-213 71-124 (322)
252 PLN02574 4-coumarate--CoA liga 21.6 8.9E+02 0.019 26.7 11.8 89 129-218 216-308 (560)
253 cd06448 L-Ser-dehyd Serine deh 21.5 3.8E+02 0.0083 27.4 8.0 61 150-211 46-106 (316)
254 TIGR01138 cysM cysteine syntha 21.0 8.2E+02 0.018 24.5 10.2 62 148-210 51-113 (290)
255 PRK12406 long-chain-fatty-acid 20.8 8.4E+02 0.018 26.4 11.3 70 148-218 189-259 (509)
256 cd01524 RHOD_Pyr_redox Member 20.8 4.2E+02 0.0091 20.8 6.7 54 124-186 29-82 (90)
257 PRK09162 hypoxanthine-guanine 20.6 2.8E+02 0.006 25.7 6.2 46 130-176 16-61 (181)
258 TIGR02804 ExbD_2 TonB system t 20.2 1.6E+02 0.0034 25.2 4.1 57 567-635 53-109 (121)
259 TIGR02618 tyr_phenol_ly tyrosi 20.0 5.4E+02 0.012 27.8 8.8 67 131-202 71-167 (450)
260 COG1223 Predicted ATPase (AAA+ 20.0 1.8E+02 0.0039 28.7 4.7 69 81-169 196-267 (368)
No 1
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-98 Score=754.23 Aligned_cols=554 Identities=51% Similarity=0.848 Sum_probs=522.9
Q ss_pred CCCCccccccCCCCcccccCCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHH
Q 006354 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (649)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~ 137 (649)
+.+||++....+ +...++++..|+.++|++.++++.++.|+++|++++.|.+.+.||+.|+++++|+|.|+||.|+.
T Consensus 20 ~~p~Rnv~~~~~---L~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~ 96 (678)
T KOG1180|consen 20 TAPYRNVRSFDG---LVSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVY 96 (678)
T ss_pred CccccccccCCC---ccCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHH
Confidence 788888876444 77889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCE-EEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHH
Q 006354 138 DRACSFASGLVNFGHNVDTR-AAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKL 216 (649)
Q Consensus 138 ~~~~~lA~~L~~~Gv~~gd~-V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l 216 (649)
+++.++|++|.++|++++++ ++|+++.+.+|+++++||++.+..+|.++.+++.+.+.|.|++++++.+||+.+.++++
T Consensus 97 ~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl 176 (678)
T KOG1180|consen 97 ERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKL 176 (678)
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHH
Confidence 99999999999999998777 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCccEEEEecCCCCCcc-CCCCC-CCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEE
Q 006354 217 SAVSSSLKTIKNVIYFENDGSEKD-SGVSG-GISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVM 294 (649)
Q Consensus 217 ~~~~~~~~~~~~ii~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~ 294 (649)
.......+.+++||+++..+.... ..+.. ..+++.+++++++++.++....++.++.|+|+|+|||||||||.||||+
T Consensus 177 ~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVm 256 (678)
T KOG1180|consen 177 KAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVM 256 (678)
T ss_pred HHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEE
Confidence 999899999999999997543331 11211 3367899999999999998877778889999999999999999999999
Q ss_pred echHHHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecce
Q 006354 295 ITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPT 374 (649)
Q Consensus 295 ~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t 374 (649)
++|+|+++.+.......+.+++.|+++.|+||+|++.+...+.++..|+++.+.+|.++.+.++.+.+++.+++..+|||
T Consensus 257 l~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPT 336 (678)
T KOG1180|consen 257 LTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPT 336 (678)
T ss_pred EecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccch
Confidence 99999999999998887789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecC
Q 006354 375 LMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGG 454 (649)
Q Consensus 375 ~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG 454 (649)
+|.++|++|+++.+.+.+++...+.+.+.+|+.++.+++..+. +++..++++|.++|+++|...|++||++++||
T Consensus 337 iM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~-----~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGG 411 (678)
T KOG1180|consen 337 IMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIE-----RNGPGSPLLDALVFKKIRALLGGNLRYILSGG 411 (678)
T ss_pred hhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHh-----ccCCchhhHHHHHHHHHHHHhCCceEEEEeCC
Confidence 9999999999999999999999999999999999999999886 36788999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhhcCCccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcc
Q 006354 455 APLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG 534 (649)
Q Consensus 455 ~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g 534 (649)
+||+++.++|+..++.|++.++||.||+|+.++...+.+...+.+|.|+++++++++|+++++|.....| +.|||+|+|
T Consensus 412 apLS~dtQrF~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~P-PrGEI~i~G 490 (678)
T KOG1180|consen 412 APLSPDTQRFMNICFCCPVLQGYGLTETCAAATVLEPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKP-PRGEILIGG 490 (678)
T ss_pred CCCCHHHHHHHHHhccccccccccccchhcccEecChhhcccccccCCccceEEEEEEhhhcCccCCCCC-CCceEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999999999887777 899999999
Q ss_pred ccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceE
Q 006354 535 FNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIR 614 (649)
Q Consensus 535 ~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~ 614 (649)
++++.|||+||++|++.|.. .+|++||+|||+|++.+||+|.|++|++|++|+++||+|+++.||++|..+|.|. +.+
T Consensus 491 ~~vt~gY~kn~ekT~e~ft~-~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~-NIC 568 (678)
T KOG1180|consen 491 PNVTMGYYKNEEKTKEDFTV-EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVD-NIC 568 (678)
T ss_pred CccChhhhCChhhhhhhcee-cCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchh-heE
Confidence 99999999999999999984 4766799999999999999999999999999999999999999999999999999 999
Q ss_pred EEecCCCC
Q 006354 615 LWRNGPMK 622 (649)
Q Consensus 615 V~g~~~~~ 622 (649)
|++++...
T Consensus 569 vyAd~~~s 576 (678)
T KOG1180|consen 569 VYADSNKS 576 (678)
T ss_pred Eecccccc
Confidence 99988555
No 2
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=9.1e-87 Score=702.83 Aligned_cols=524 Identities=36% Similarity=0.610 Sum_probs=460.8
Q ss_pred CCCCccccccCCCCcccccCCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHH
Q 006354 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (649)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~ 137 (649)
+..|+.....+. +......++..|+++.|++.++++|+.++++++... |+. +.|+|+||.|+.
T Consensus 53 ~~~~~s~~~~~~--~~~~~~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~--------~~~-------~~~~~~tY~q~~ 115 (691)
T KOG1256|consen 53 DGSRRSAVLPRE--ELFSCPFDGPLTLYEGFRRSVEKSGNGPMLGTRVIV--------DGK-------GPYEWLTYKQVY 115 (691)
T ss_pred CCceeeeeccCC--CCCCCCCCCcccHHHHhhcchhccCCCCceeEEecc--------cCC-------CCcEEEEHHHHH
Confidence 345555554322 123344567899999999999999999999998643 343 788999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEEC-chhHHHH
Q 006354 138 DRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD-SKQLKKL 216 (649)
Q Consensus 138 ~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~l 216 (649)
+++.++|.+|+++|+++++.|+|++-|++||+++.+||...|.++|||+.+++++.+++|++++++.++|++ ++....+
T Consensus 116 e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~l 195 (691)
T KOG1256|consen 116 ERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKL 195 (691)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 6677777
Q ss_pred HHhhc--cCCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCC-CCCCCCCeEEEEeecCCCCCcceE
Q 006354 217 SAVSS--SLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDP-SLPSQNGVAVIMYTSGSTGLPKGV 293 (649)
Q Consensus 217 ~~~~~--~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~i~~TSGSTG~PKgV 293 (649)
.+... ..+.++.+|.+++........ ....++.+++|+++.+.+......+ .+++|+|+|.|+|||||||.||||
T Consensus 196 l~~~~~~~~~~LK~iI~~~~~~~~~~~~--~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGV 273 (691)
T KOG1256|consen 196 LEIKENDSLPSLKAIIQLDEPSDELKEK--AENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGV 273 (691)
T ss_pred HhhcccccCccceeEEEecCCchhhhhh--hhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceE
Confidence 77665 488999999999886543221 2223688999999999998776666 489999999999999999999999
Q ss_pred EechHHHHHHHHHH---HhhCC--CCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEe--CCcccccccchhhccCccc
Q 006354 294 MITHGNIVATAAAI---KTLIP--NPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGY--GSTLTMTDTSSKIKKGTKG 366 (649)
Q Consensus 294 ~~th~~l~~~~~~~---~~~~~--~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~--~~~~~l~~~~~~~~~~~~~ 366 (649)
|+||+|+++.+... ..... ....+|++++|+||+|++........++.|+++++ +|+..+.+.
T Consensus 274 MLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~d---------- 343 (691)
T KOG1256|consen 274 MLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDD---------- 343 (691)
T ss_pred EEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHH----------
Confidence 99999999976542 22221 22336999999999999999998888899999999 777777777
Q ss_pred cceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH-hhhhccccccccchhhhHHHHHHHHHHHHhCC
Q 006354 367 DVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRL-AAVEGSWFGAWGLERMLWDAIVFKSVRAVLGG 445 (649)
Q Consensus 367 ~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 445 (649)
+++.+||.+.+||.+|+++.+.+.+....++.+++++|++|..+++ ..+. .+..+. ..++||+++|++++..+|+
T Consensus 344 -lk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~~~~-~G~~~~--~~~~~D~lVf~KI~~~LGg 419 (691)
T KOG1256|consen 344 -LKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEHRLM-KGKSRS--RDRFADKLVFHKIKQSLGG 419 (691)
T ss_pred -HHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhh-CCCCcc--cchHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999 4443 222222 6889999999999999999
Q ss_pred ceEEEEecCCCCCHHHHHHHHhhcCCccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCC
Q 006354 446 RIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPM 525 (649)
Q Consensus 446 ~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g 525 (649)
++|.+++|++|+++++..|++..+|++|+++||+|||++.++.....+...+++|.|+|+++++++|+++.++. ..+
T Consensus 420 ~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~~d~~lgsvG~p~p~~~vKL~dvpe~ny~---a~~ 496 (691)
T KOG1256|consen 420 NVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLPGDNVLGSVGPPVPGNEVKLVDVPEMNYD---ADG 496 (691)
T ss_pred ceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccCCCCCCCCcCCcccCceEEEechHHhCcC---cCC
Confidence 99999999999999999999999999999999999999877777777778899999999999999999999985 456
Q ss_pred CccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhcc
Q 006354 526 PRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTV 605 (649)
Q Consensus 526 ~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~ 605 (649)
..|||||+|++++.|||+||++|+++|+ .| ||++|||+|+|+++|.|+|+||++++||+++||+|.|+.||+++.+
T Consensus 497 ~~GEIcirG~~Vf~GYyK~p~~T~e~id--eD--GWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 497 SKGEICVRGPNVFMGYYKDPEKTAEAID--ED--GWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred CcceEEEecchhceeccCChHHHhhhhc--cc--cccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhc
Confidence 6899999999999999999999999998 77 9999999999999999999999999999999999999999999999
Q ss_pred CcccccceEEEecCCCC
Q 006354 606 LPLLFHHIRLWRNGPMK 622 (649)
Q Consensus 606 ~p~V~~~~~V~g~~~~~ 622 (649)
.+.|. +.+|+|.+...
T Consensus 573 ~~~V~-qi~V~g~s~~~ 588 (691)
T KOG1256|consen 573 SLPVQ-QIFVLGDSLRS 588 (691)
T ss_pred CCceE-EEEEECCcchh
Confidence 99999 99999998444
No 3
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.5e-82 Score=720.38 Aligned_cols=559 Identities=72% Similarity=1.211 Sum_probs=477.1
Q ss_pred CCccccccCCCCcccccCCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHH
Q 006354 60 EPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDR 139 (649)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~ 139 (649)
.||+... +.....++++..|+.++|+++++++||++|+.++..++.+.+...+|+.|++.+.++|+++||+||.++
T Consensus 40 ~~r~~~~----~~~~~~~~~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~ 115 (696)
T PLN02387 40 AIRNARF----PELVETPWEGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFER 115 (696)
T ss_pred ceecCcc----ccccccCCCCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHH
Confidence 4555442 224555678889999999999999999999988765544444444677777778899999999999999
Q ss_pred HHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHh
Q 006354 140 ACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAV 219 (649)
Q Consensus 140 ~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~ 219 (649)
++++|++|.++|+++||+|+|+++|+++|+++++||+++|+++||+++.++++++.++|++++++++|++.+..+.+..+
T Consensus 116 v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~ 195 (696)
T PLN02387 116 VCNFASGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDI 195 (696)
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888887
Q ss_pred hccCCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHH
Q 006354 220 SSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGN 299 (649)
Q Consensus 220 ~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~ 299 (649)
...++.++.++.+++......... ....++.+.+++++...+.........+.++|+++|+|||||||.||||++||+|
T Consensus 196 ~~~~~~l~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~ 274 (696)
T PLN02387 196 SSQLETVKRVIYMDDEGVDSDSSL-SGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGN 274 (696)
T ss_pred hhccCCceEEEEECCCCchhhhhh-hccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHH
Confidence 777788899998875432111000 0122456778998887655433334456789999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEec
Q 006354 300 IVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAV 379 (649)
Q Consensus 300 l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~ 379 (649)
+++.+......+..+.++|++++++|++|++++...+.++..|+++.++++..+.+....+...+..++++++||+++++
T Consensus 275 l~~~~~~~~~~~~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~v 354 (696)
T PLN02387 275 IVATVAGVMTVVPKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAV 354 (696)
T ss_pred HHHHHHHHHhhcCCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEeh
Confidence 99988887665436788999999999999999988777899999999988776666433334455667999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCH
Q 006354 380 PAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSA 459 (649)
Q Consensus 380 P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~ 459 (649)
|.+++.+.+.........+.+++.+|+++...++..+...+++..+..+++||.++++++++.+|+++|.+++||+++++
T Consensus 355 P~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~ 434 (696)
T PLN02387 355 PAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSG 434 (696)
T ss_pred hHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCH
Confidence 99999999988777778888999999999999998887666666677889999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccc
Q 006354 460 DSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTA 539 (649)
Q Consensus 460 ~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~ 539 (649)
++.++++..+|++++++||+||+++.++.....+...+++|+|+|+++++|+|++++++.....+++.|||+|+|++++.
T Consensus 435 ~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~ 514 (696)
T PLN02387 435 DTQRFINICLGAPIGQGYGLTETCAGATFSEWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTL 514 (696)
T ss_pred HHHHHHHHHcCCCeeEeechhhcccceeecCcccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccc
Confidence 99999998889999999999999887777666666678999999999999999777776543456678999999999999
Q ss_pred cccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecC
Q 006354 540 GYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNG 619 (649)
Q Consensus 540 gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~ 619 (649)
|||++|+.|++.|..+++|.|||+|||+|++|+||+|+|+||+||+||+++|++|+|.+||++|.+||.|. +|+|+|++
T Consensus 515 GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~-~~~V~g~~ 593 (696)
T PLN02387 515 GYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVD-NIMVHADP 593 (696)
T ss_pred hhcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCee-EEEEEecC
Confidence 99999999999995335544699999999999999999999999999997899999999999999999999 99999988
Q ss_pred -CCCcc
Q 006354 620 -PMKLA 624 (649)
Q Consensus 620 -~~~~~ 624 (649)
+....
T Consensus 594 ~~~~~~ 599 (696)
T PLN02387 594 FHSYCV 599 (696)
T ss_pred CcceEE
Confidence 44333
No 4
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=3.1e-78 Score=649.36 Aligned_cols=497 Identities=31% Similarity=0.495 Sum_probs=411.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 006354 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (649)
Q Consensus 79 ~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V 158 (649)
....++..++.++++.+|+.+|+.... .+.++.+||+|+.+++.++|++|+++|+..||+|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~a~~~~~-------------------~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrv 73 (613)
T COG1022 13 AEIHTLPKRLAERVKDRPDGVALMYKE-------------------LGGWEAITYRELYERVRALASGLLSLGIPAGDRV 73 (613)
T ss_pred hhcccHHHHHHHHhhcCCcceeEeeec-------------------CCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 334789999999999999988887642 3556789999999999999999999999779999
Q ss_pred EEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchh-HHHHHHhhccCCCccEEEEecCCCC
Q 006354 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ-LKKLSAVSSSLKTIKNVIYFENDGS 237 (649)
Q Consensus 159 ~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-~~~l~~~~~~~~~~~~ii~~~~~~~ 237 (649)
+|++.|+++|+++.+||+.+|++.||++++++++++.++|++++++++|++... .+.+..+....+.+...+...+...
T Consensus 74 ai~a~nr~eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (613)
T COG1022 74 AIFAANRPEWAIADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVR 153 (613)
T ss_pred EEEeCCCHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999999854 4444444443332222221111000
Q ss_pred Ccc---CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCC-
Q 006354 238 EKD---SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN- 313 (649)
Q Consensus 238 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~- 313 (649)
... ..............+ .. ..........++.++|+|.|+|||||||.|||||+||+|+++++......+ .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~-~~ 229 (613)
T COG1022 154 EAVEAKALVLEVFPDEGISLF-LI--DSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVL-PP 229 (613)
T ss_pred hccchhhccccccccccchhh-hh--cccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhC-CC
Confidence 000 000000000011111 11 111111122577899999999999999999999999999999999999998 6
Q ss_pred CCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEe-CCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHH
Q 006354 314 PGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGY-GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (649)
Q Consensus 314 ~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~-~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 391 (649)
.+++|++++++|++|++.+.. ....+..|+++.+ .++..+.+. +++++||.+++||++|+.+.+.+.
T Consensus 230 ~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~~~~~~~~~d-----------l~~~rPt~m~~VPRvwE~i~~~I~ 298 (613)
T COG1022 230 IGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFKEDPRTLLED-----------LKEVRPTVMIGVPRVWEKVYKGIM 298 (613)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEecCCHHHHHHH-----------HHHhCCeEEeechHHHHHHHHHHH
Confidence 889999999999999999987 5566777777766 777778777 999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhhhhcccc-ccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcC
Q 006354 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWF-GAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG 470 (649)
Q Consensus 392 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~ 470 (649)
+++...+..++.+|++++............ ++.....-..|+++|+|+++.+|+++|++++||+++++++..+++.. |
T Consensus 299 ~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-G 377 (613)
T COG1022 299 EKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-G 377 (613)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-C
Confidence 999999999999999998775432221111 11122233589999999999999999999999999999999999986 8
Q ss_pred CccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchh
Q 006354 471 APIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSE 550 (649)
Q Consensus 471 ~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~ 550 (649)
+++.++||+|||+++++.+++.....+++|+|+|+++++|+| .|||+||||.+|.|||++|++|++
T Consensus 378 i~i~eGYGlTEts~~~~v~~~~~~~~gtvG~p~p~~evKI~d--------------~GEilVRG~~Vm~GYyk~pe~Tae 443 (613)
T COG1022 378 IPILEGYGLTETSAVVSVNPPDRFVLGTVGKPLPGIEVKIAD--------------DGEILVRGPNVMKGYYKNPEATAE 443 (613)
T ss_pred CCeEEEecccccccceEEccccCcccCCcCCcCCCceEEEcc--------------CceEEEecchhcchhcCChHHHhh
Confidence 999999999999999999999999999999999999999997 499999999999999999999999
Q ss_pred hhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhh
Q 006354 551 VYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKI 629 (649)
Q Consensus 551 ~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~ 629 (649)
+|+ +| |||+|||+|.+|++|+|.|+||++|+||+++|++|+|+.||+.+.++|.|. +++|+|..+...++.+..
T Consensus 444 af~--~D--GWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~-qi~vvg~~k~~~~AlIvp 517 (613)
T COG1022 444 AFT--ED--GWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIE-QICVVGDDKKFLVALIVP 517 (613)
T ss_pred hcc--cc--CCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCee-EEEEEecCCcceEEEEeC
Confidence 998 67 999999999999999999999999999999999999999999999999999 999999877777755543
No 5
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.1e-77 Score=671.36 Aligned_cols=513 Identities=21% Similarity=0.346 Sum_probs=425.6
Q ss_pred CCCCccccccCCCCcccccCCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHH
Q 006354 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (649)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~ 137 (649)
+..||....... .++....|+.++|.++++++|+++|+++.+ +|. .++++||+||.
T Consensus 43 ~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~~~~p~~~Al~~~~----------~g~--------~~~~~Ty~el~ 98 (746)
T PTZ00342 43 SSVYCMKDHKKK------SSLYVYKHIMKLLLEKYKLNNNKIAIVEHS----------CGE--------PQNYITYGNFF 98 (746)
T ss_pred CCceecCchhhc------ccccccchHHHHHHHHHhhcCCceeEeccC----------CCC--------CceeeeHHHHH
Confidence 567774433222 566778999999999999999999998531 221 24689999999
Q ss_pred HHHHHHHHHHHH---CCCCCC-----------CEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCc
Q 006354 138 DRACSFASGLVN---FGHNVD-----------TRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQV 203 (649)
Q Consensus 138 ~~~~~lA~~L~~---~Gv~~g-----------d~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~ 203 (649)
++++++|++|.+ +|+++| |+|+|+++|+++|+++++||+++|++.||+++.++++++.++|+++++
T Consensus 99 ~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~ 178 (746)
T PTZ00342 99 KKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKL 178 (746)
T ss_pred HHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCC
Confidence 999999999997 499999 999999999999999999999999999999999999999999999999
Q ss_pred eEEEECchhHHHHHHhhccCCCccEEEEecCCCCCc-----------------cCC------------------------
Q 006354 204 TTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK-----------------DSG------------------------ 242 (649)
Q Consensus 204 ~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~-----------------~~~------------------------ 242 (649)
+++|++.+..+.+.++...++.++.+++++...... ...
T Consensus 179 ~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (746)
T PTZ00342 179 EWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPL 258 (746)
T ss_pred CEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999888888887777788899999887532110 000
Q ss_pred ------------CC--CCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHH
Q 006354 243 ------------VS--GGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK 308 (649)
Q Consensus 243 ------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~ 308 (649)
+. ....+....+++++..... .........++|+|+|+|||||||.||||++||+|+++.+....
T Consensus 259 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~ 337 (746)
T PTZ00342 259 EYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKT-TNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLC 337 (746)
T ss_pred ccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcc-cCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHh
Confidence 00 0001223345555544321 12223445789999999999999999999999999999887665
Q ss_pred hhC-CCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEe--CCcccccccchhhccCccccceeecceEEEechHHHHH
Q 006354 309 TLI-PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGY--GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR 385 (649)
Q Consensus 309 ~~~-~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~--~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 385 (649)
... ....+.|++++++|++|++++...+.+++.|+++++ .++..+.+. +++++||+++++|.+|++
T Consensus 338 ~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~~~~~l~~d-----------i~~~~pT~~~~VP~v~~~ 406 (746)
T PTZ00342 338 KHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTINIWSKDINYFSKD-----------IYNSKGNILAGVPKVFNR 406 (746)
T ss_pred hcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHH-----------HHHhCCcEEEchHHHHHH
Confidence 432 023356899999999999999888888999999998 445566666 999999999999999999
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHH--HHHHHHHHhCCceEEEEecCCCCCHHHHH
Q 006354 386 VREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAI--VFKSVRAVLGGRIRFMICGGAPLSADSQR 463 (649)
Q Consensus 386 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~ 463 (649)
+.+.+.......+.+++.+|++++..+..... +..+++++.+ +++++|+.+|++||.+++||+++++++.+
T Consensus 407 i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-------~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~ 479 (746)
T PTZ00342 407 IYTNIMTEINNLPPLKRFLVKKILSLRKSNNN-------GGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAE 479 (746)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhc-------CCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHH
Confidence 99988888877788899999999988876433 2234566665 79999999999999999999999999999
Q ss_pred HHHhhcCCccccccCcccccccccccCCCCCCCCccCCCc-ccceEEEEecCCCCcccCCCCCCccEEEEcccccccccc
Q 006354 464 FINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPV-PCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYF 542 (649)
Q Consensus 464 ~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~-p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~ 542 (649)
+|+..+|++++++||+||+++.++.....+...+++|+|+ |+++++|+|+++... ...++.|||+|+|++++.|||
T Consensus 480 ~~~~~~g~~i~~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg~e~ki~d~~~~~~---~~~~~~GEl~vrGp~v~~GY~ 556 (746)
T PTZ00342 480 ELSVLLNVNYYQGYGLTETTGPIFVQHADDNNTESIGGPISPNTKYKVRTWETYKA---TDTLPKGELLIKSDSIFSGYF 556 (746)
T ss_pred HHHHhcCCCEEEeeccCcccceeeeccCCCCCcccccCcCCCcEEEEEeccccccc---CCCCCceEEEEecCccccccc
Confidence 9999889999999999999887776666666779999998 999999998665332 234568999999999999999
Q ss_pred CCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCC
Q 006354 543 NNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPM 621 (649)
Q Consensus 543 ~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~ 621 (649)
++|+.|+++|. .| |||+|||+|++|+||+|+|+||+||+||+++|++|+|.+||++|.+||.|. +|+|+|+...
T Consensus 557 ~~pe~T~~~f~--~d--GW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~-~~~VvG~~~~ 630 (746)
T PTZ00342 557 LEKEQTKNAFT--ED--GYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFIN-FCVVYGDDSM 630 (746)
T ss_pred CChhhhhhhcC--cC--CcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCcc-EEEEEccCCc
Confidence 99999999996 56 899999999999999999999999999988899999999999999999999 9999997633
No 6
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=5.3e-76 Score=665.29 Aligned_cols=529 Identities=31% Similarity=0.567 Sum_probs=420.6
Q ss_pred CCCCccccccCCCCcccccCCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHH
Q 006354 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (649)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~ 137 (649)
++.+|.......++ .+.+...|+.++|+++++++|+++|+++++.. ++. .++++++||+||.
T Consensus 25 ~~~~~~~~~~~~~~----~~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~--------~~~------~~~~~~~Ty~el~ 86 (666)
T PLN02614 25 GPVYRSIFAKDGFP----NPIEGMDSCWDVFRMSVEKYPNNPMLGRREIV--------DGK------PGKYVWQTYQEVY 86 (666)
T ss_pred CCcccCcccccccC----CCCCCCCcHHHHHHHHHHhCCCCCeEEEeccc--------CCC------CCCcEEeEHHHHH
Confidence 45555544333321 23456679999999999999999999864211 221 1345679999999
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHH
Q 006354 138 DRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLS 217 (649)
Q Consensus 138 ~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~ 217 (649)
++++++|++|+++|+++||+|+|+++|+++|++++|||+++|+++||+++.++++++.+++++++++++|++.+....+.
T Consensus 87 ~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~ 166 (666)
T PLN02614 87 DIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELF 166 (666)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987665554
Q ss_pred Hhhcc-CCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEec
Q 006354 218 AVSSS-LKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMIT 296 (649)
Q Consensus 218 ~~~~~-~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~t 296 (649)
..... .+.++.++.+++....... .....++...+++++...+.....+.....++|+|+|+|||||||.||||++|
T Consensus 167 ~~~~~~~~~l~~vi~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lt 244 (666)
T PLN02614 167 KTCPNSTEYMKTVVSFGGVSREQKE--EAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMIS 244 (666)
T ss_pred HhcccccccceEEEEeCCCChHHhh--hhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEe
Confidence 33221 2236677776532110000 00011334667888766543222222345689999999999999999999999
Q ss_pred hHHHHHHHHHHHhhC----CCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEe--CCcccccccchhhccCcccccee
Q 006354 297 HGNIVATAAAIKTLI----PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGY--GSTLTMTDTSSKIKKGTKGDVSV 370 (649)
Q Consensus 297 h~~l~~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~--~~~~~l~~~~~~~~~~~~~~i~~ 370 (649)
|+|+++.+.+....+ ..+.++|++++++|++|++++...+.++..|+++++ +++..+.+. +++
T Consensus 245 h~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~-----------i~~ 313 (666)
T PLN02614 245 NESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVKLLIED-----------LGE 313 (666)
T ss_pred cHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHH-----------HHH
Confidence 999998877665443 146789999999999999998766677889999988 344555555 999
Q ss_pred ecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEE
Q 006354 371 LKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFM 450 (649)
Q Consensus 371 ~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i 450 (649)
++||+++++|++|+.+...+.......+.+++.+|+++...++..+..+. ......++++.++++++++.+|++||.+
T Consensus 314 ~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~lg~~lr~~ 391 (666)
T PLN02614 314 LKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQ--SHVEASPLCDKLVFNKVKQGLGGNVRII 391 (666)
T ss_pred hCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCC--CCcccchHHHHHHHHHHHHHhCCcEEEE
Confidence 99999999999999999887766666677788899999888776654321 1223467889999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhcCCccccccCcccccccccccCCCC-CCCCccCCCcccceEEEEecCCCCcccCCCCCCccE
Q 006354 451 ICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGE 529 (649)
Q Consensus 451 ~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GE 529 (649)
++||+++++++.++++...+++++++||+||+++.++.....+ ...+++|+|+||++++|+|.++++... +++|+.||
T Consensus 392 ~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~-~~~g~~GE 470 (666)
T PLN02614 392 LSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDA-LASTPRGE 470 (666)
T ss_pred EEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCccc-CCCCCCce
Confidence 9999999998766655543689999999999987655443332 346899999999999999855443222 67899999
Q ss_pred EEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCccc
Q 006354 530 IVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLL 609 (649)
Q Consensus 530 l~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V 609 (649)
|+|+|++++.|||++|+.|++.| .+ |||+|||+|++|+||+|+|+||+||+||+++|++|+|.|||++|.+||.|
T Consensus 471 l~vrGp~v~~GY~~~pe~T~~~f---~d--Gw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V 545 (666)
T PLN02614 471 ICIRGKTLFSGYYKREDLTKEVL---ID--GWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAV 545 (666)
T ss_pred EEEcCCcccccccCCHHHhhhhh---cc--CCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCe
Confidence 99999999999999999999999 56 89999999999999999999999999998789999999999999999999
Q ss_pred ccceEEEecCC-CCcccc
Q 006354 610 FHHIRLWRNGP-MKLASS 626 (649)
Q Consensus 610 ~~~~~V~g~~~-~~~~~~ 626 (649)
. +|+|+|+++ +.+...
T Consensus 546 ~-~~~V~g~~~~~~l~al 562 (666)
T PLN02614 546 D-SVWVYGNSFESFLVAI 562 (666)
T ss_pred e-EEEEEecCCcceEEEE
Confidence 9 999999984 454433
No 7
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.8e-75 Score=657.99 Aligned_cols=521 Identities=31% Similarity=0.564 Sum_probs=421.7
Q ss_pred CCCCccccccCCCCcccccCCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHH
Q 006354 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (649)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~ 137 (649)
++.+|+......+. . ..+...|++++|+++++++|+++|++.+... +++ .++++++||+||.
T Consensus 23 ~~~~~~~~~~~~~~---~-~~~~~~t~~~~l~~~~~~~p~~~al~~~~~~--------~~~------~g~~~~~Ty~el~ 84 (660)
T PLN02861 23 GPVYRSIYAKDGLL---D-LPADIDSPWQFFSDAVKKYPNNQMLGRRQVT--------DSK------VGPYVWLTYKEVY 84 (660)
T ss_pred CCcccccccccccc---c-CCCCCCCHHHHHHHHHHhCCCCCeEEEEecC--------CCC------CCCceEEEHHHHH
Confidence 66666655444422 1 1255679999999999999999999875211 222 2455689999999
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHH
Q 006354 138 DRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLS 217 (649)
Q Consensus 138 ~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~ 217 (649)
++++++|++|+++|+++||+|+|+++|+++|++++|||+++|+++||+++.++.+++.++|++++++++|++.+..+.+.
T Consensus 85 ~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~ 164 (660)
T PLN02861 85 DAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSIL 164 (660)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988776665
Q ss_pred HhhccC-CCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEec
Q 006354 218 AVSSSL-KTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMIT 296 (649)
Q Consensus 218 ~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~t 296 (649)
.+.... +.++.++.+++....... .....+....+++++...+... .......++|+|+|+|||||||.||||++|
T Consensus 165 ~~~~~~~~~l~~ii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dd~a~i~yTSGTTG~PKGV~lt 241 (660)
T PLN02861 165 SCLPKCSSNLKTIVSFGDVSSEQKE--EAEELGVSCFSWEEFSLMGSLD-CELPPKQKTDICTIMYTSGTTGEPKGVILT 241 (660)
T ss_pred HhhhhCCCCCEEEEEECCCChhhhh--hhhcCCcEEEEHHHHHHhCccc-CCCCccCCCceEEEEecCCCCCCCCEEEEe
Confidence 544433 257777777543211000 0001124456788776544321 122345689999999999999999999999
Q ss_pred hHHHHHHHHHHHhhCC----CCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEe--CCcccccccchhhccCcccccee
Q 006354 297 HGNIVATAAAIKTLIP----NPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGY--GSTLTMTDTSSKIKKGTKGDVSV 370 (649)
Q Consensus 297 h~~l~~~~~~~~~~~~----~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~--~~~~~l~~~~~~~~~~~~~~i~~ 370 (649)
|+++++.+......+. .+.++|++++++|++|++++...+.+++.|+++++ +++..+.+. +++
T Consensus 242 h~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~-----------i~~ 310 (660)
T PLN02861 242 NRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQGDIRYLMED-----------VQA 310 (660)
T ss_pred cHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHH-----------HHH
Confidence 9999998877665541 14678999999999999998776678999999988 445555555 999
Q ss_pred ecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEE
Q 006354 371 LKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFM 450 (649)
Q Consensus 371 ~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i 450 (649)
++||+++++|++|+.+.+.+..+....+.+++.+|+++...++..+..+. ......+.+++++++++|+.+|+++|.+
T Consensus 311 ~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~r~~lg~~lr~~ 388 (660)
T PLN02861 311 LKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGL--KQEEASPRLDRLVFDKIKEGLGGRVRLL 388 (660)
T ss_pred hCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCC--CCcCccHhHHHHHHHHHHHHhCCcEEEE
Confidence 99999999999999999988888888888999999999999887765321 1122356788899999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhcC-CccccccCcccccccccccCCCC-CCCCccCCCcccceEEEEecCCCCcccCCCCCCcc
Q 006354 451 ICGGAPLSADSQRFINICMG-APIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRG 528 (649)
Q Consensus 451 ~~gG~~l~~~~~~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~G 528 (649)
++||+++++++.++++ .++ .+++++||+||+++.++...... ...+++|+|+|+++++|+|.++.++.. +++++.|
T Consensus 389 ~~Ggapl~~~~~~~~~-~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~-~~~~~~G 466 (660)
T PLN02861 389 LSGAAPLPRHVEEFLR-VTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDA-LSDVPRG 466 (660)
T ss_pred EECCCCCCHHHHHHHH-HHcCCCeeEecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCccc-CCCCCce
Confidence 9999999999876555 455 47999999999987665443322 346899999999999999854433221 3456789
Q ss_pred EEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcc
Q 006354 529 EIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPL 608 (649)
Q Consensus 529 El~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~ 608 (649)
||+|+|++++.|||++|+.|++.| .+ |||+|||+|++|+||+|+|+||+||+||+++|++|+|.+||++|.+||.
T Consensus 467 Ei~vrGp~v~~GY~~~pe~T~~~f---~d--Gw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~ 541 (660)
T PLN02861 467 EICLRGNTLFSGYHKRQDLTEEVL---ID--GWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPL 541 (660)
T ss_pred eEEEcCCcccccccCCHHHHHhhh---hc--cCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCC
Confidence 999999999999999999999999 56 8999999999999999999999999999878999999999999999999
Q ss_pred cccceEEEecCC
Q 006354 609 LFHHIRLWRNGP 620 (649)
Q Consensus 609 V~~~~~V~g~~~ 620 (649)
|. +|+|+|.++
T Consensus 542 V~-~a~V~G~~~ 552 (660)
T PLN02861 542 IA-SIWVYGNSF 552 (660)
T ss_pred ee-EEEEEecCC
Confidence 99 999999884
No 8
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8.8e-75 Score=656.89 Aligned_cols=504 Identities=34% Similarity=0.608 Sum_probs=426.9
Q ss_pred CCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCE
Q 006354 78 WKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTR 157 (649)
Q Consensus 78 ~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~ 157 (649)
.+...|++++|+++++++|+++|+.++... ++. .+.++++||+||.++++++|++|+++|+++||+
T Consensus 40 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~--------~~~------~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~ 105 (651)
T PLN02736 40 HPEIGTLHDNFVYAVETFRDYKYLGTRIRV--------DGT------VGEYKWMTYGEAGTARTAIGSGLVQHGIPKGAC 105 (651)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCeEEEEecC--------CCC------CCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 355679999999999999999999764210 222 234578999999999999999999999999999
Q ss_pred EEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCC
Q 006354 158 AAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGS 237 (649)
Q Consensus 158 V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~ 237 (649)
|+|+++|+++|+++++||+++|+++||+++.++++++.+++++++++++|++.+..+.+..+....+.++.++.+++...
T Consensus 106 Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~ 185 (651)
T PLN02736 106 VGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADE 185 (651)
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCch
Confidence 99999999999999999999999999999999999999999999999999999888887777667777888887653221
Q ss_pred CccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCC
Q 006354 238 EKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRS 317 (649)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~ 317 (649)
.. ..+. ...+....+++++...............++|+|+|+|||||||.||||++||+++++.+.+....+ .+.++
T Consensus 186 ~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~-~~~~~ 262 (651)
T PLN02736 186 PL-PSLP-SGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLST-KFYPS 262 (651)
T ss_pred hh-hhhh-ccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhcc-CCCCC
Confidence 00 0000 001345678888876554333233445789999999999999999999999999999998888777 88899
Q ss_pred cEEEEccChHHHHHHHHHHHHHHhCceEEeC--CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHH
Q 006354 318 DVYLAYLPLAHVLELAAESIMLCAGCAIGYG--STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVE 395 (649)
Q Consensus 318 d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~--~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 395 (649)
|++++++|++|++++...+.++..|+++++. ++..+++. +++++||+++++|.+|+.+.+.......
T Consensus 263 d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~-----------i~~~~~t~~~~vP~~~~~l~~~~~~~~~ 331 (651)
T PLN02736 263 DVHISYLPLAHIYERVNQIVMLHYGVAVGFYQGDNLKLMDD-----------LAALRPTIFCSVPRLYNRIYDGITNAVK 331 (651)
T ss_pred CEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHH-----------HHHhCCcEEecchHHHHHHHHHHHHHHh
Confidence 9999999999999998888899999999884 34444444 9999999999999999999998888888
Q ss_pred hhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCcccc
Q 006354 396 EKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQ 475 (649)
Q Consensus 396 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~ 475 (649)
..+.+++.+++++...+...+..+ ....+.++.+++++++..+|+++|.+++||+++++++.++++..+|+++++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~ 406 (651)
T PLN02736 332 ESGGLKERLFNAAYNAKKQALENG-----KNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLE 406 (651)
T ss_pred cccHHHHHHHHHHHHHHHHHHHcC-----CCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEE
Confidence 888899999999888776555421 123457788999999999999999999999999999999999888999999
Q ss_pred ccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccC
Q 006354 476 AYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD 555 (649)
Q Consensus 476 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~ 555 (649)
+||+||+++.++.....+...+++|+|+||++++|+|.+++.+...+.+++.|||+|+|++++.|||++|+.|++.|.
T Consensus 407 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~-- 484 (651)
T PLN02736 407 GYGMTETSCVISGMDEGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVID-- 484 (651)
T ss_pred EechHHhchheeccCCCCCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhc--
Confidence 999999987776665555667899999999999999965544333345667899999999999999999999999996
Q ss_pred CCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecC
Q 006354 556 ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNG 619 (649)
Q Consensus 556 ~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~ 619 (649)
.+ |||+|||+|++|+||+|+|+||+||+||+++|++|+|.|||++|.+||.|. +|+|+|..
T Consensus 485 ~d--gw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~-~a~V~g~~ 545 (651)
T PLN02736 485 ED--GWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVA-QCFVYGDS 545 (651)
T ss_pred cC--CCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCee-EEEEEecC
Confidence 56 899999999999999999999999999987799999999999999999999 99999954
No 9
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-73 Score=646.30 Aligned_cols=517 Identities=33% Similarity=0.578 Sum_probs=419.5
Q ss_pred CCCCCCHHHHHHHHHHhCCCCcceEEeeecCcccccc--CCCc--cceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCC
Q 006354 78 WKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTA--SDGR--KFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHN 153 (649)
Q Consensus 78 ~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~--~dg~--~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~ 153 (649)
|+...|++++|+++++++||++|+++++....+.+.. .+|+ .|+....+.++++||+||.++++++|++|+++|++
T Consensus 65 ~~~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~ 144 (700)
T PTZ00216 65 WYYGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLT 144 (700)
T ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCC
Confidence 3455799999999999999999999874221111111 0222 24445556788999999999999999999999999
Q ss_pred CCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhcc--CCCccEEEE
Q 006354 154 VDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSS--LKTIKNVIY 231 (649)
Q Consensus 154 ~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~--~~~~~~ii~ 231 (649)
+||+|+|+++|+++|+++++||+++|++++|+++.++++++.+++++++++++|++.+....+...... .+.. .++.
T Consensus 145 ~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~-~ii~ 223 (700)
T PTZ00216 145 KGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNT-TIIY 223 (700)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCce-EEEE
Confidence 999999999999999999999999999999999999999999999999999999998776655444322 2233 4555
Q ss_pred ecCCCCCccCCCCCCCCCceEeehHHHHhcCC--CCCC-CCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHH
Q 006354 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGK--RSPV-DPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK 308 (649)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~ 308 (649)
++...... ...+....+|+++...+. .... ......++|+|+|+|||||||.||||++||+|+++.+.+..
T Consensus 224 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~ 297 (700)
T PTZ00216 224 LDSLPASV------DTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALE 297 (700)
T ss_pred ECCCcccc------ccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHH
Confidence 54322110 012456788998877652 1111 12345789999999999999999999999999999888766
Q ss_pred hhC----CCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHH
Q 006354 309 TLI----PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFD 384 (649)
Q Consensus 309 ~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~ 384 (649)
..+ ..+.++|++++++|++|++++......+..|+++++.++..+.+. ......++++++||++.++|++|+
T Consensus 298 ~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~l~~~----~~~~~~~l~~~~pT~~~~vP~~~~ 373 (700)
T PTZ00216 298 DRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFGSPRTLTDT----FARPHGDLTEFRPVFLIGVPRIFD 373 (700)
T ss_pred hhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEECCHHHhhhh----hccccchHHHcCCcEEEechHHHH
Confidence 543 124678999999999999998776667889998888777666553 111122388899999999999999
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHH
Q 006354 385 RVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRF 464 (649)
Q Consensus 385 ~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~ 464 (649)
.+.+.........+.+++.+|.++...+++.+. .+...++++.++|++++..+|+++|.+++||+++++++.++
T Consensus 374 ~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~ 447 (700)
T PTZ00216 374 TIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALK------EGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEF 447 (700)
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH------cCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHH
Confidence 999988877777888899999999998887665 23356789999999999999999999999999999999999
Q ss_pred HHhhcCCccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCC
Q 006354 465 INICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNN 544 (649)
Q Consensus 465 ~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~ 544 (649)
++..++ +++++||+||+++.++.....+...+++|+|+||++++|+|.++.. ..+++++.|||+|+|++++.|||++
T Consensus 448 ~~~~~~-~l~~~YG~TEt~~~~~~~~~~~~~~~svG~p~~g~evkI~d~~~~~--~~~~~~~~GEL~vrG~~v~~GY~~~ 524 (700)
T PTZ00216 448 VNVVFG-MVIQGWGLTETVCCGGIQRTGDLEPNAVGQLLKGVEMKLLDTEEYK--HTDTPEPRGEILLRGPFLFKGYYKQ 524 (700)
T ss_pred HHHHhh-hHhhccCcccccccccccCCCCCCCCCcCCcCCCeEEEEeechhhc--cCCCCCCCceEEEcCCcccchhcCC
Confidence 988878 9999999999988777665555567899999999999999954422 1245677899999999999999999
Q ss_pred CccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccc--eEEEecC
Q 006354 545 PGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHH--IRLWRNG 619 (649)
Q Consensus 545 ~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~--~~V~g~~ 619 (649)
|+.|++.|. .+ |||+|||+|++|+||+|+|+||+||+||..+|++|+|++||++|.+||.|. + ++|++.+
T Consensus 525 pe~T~~~f~--~d--Gw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~-~~~~~v~~~~ 596 (700)
T PTZ00216 525 EELTREVLD--ED--GWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVV-PNGVCVLVHP 596 (700)
T ss_pred hhHhhhhcc--cc--CCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcc-cceEEEEEec
Confidence 999999997 66 899999999999999999999999999955799999999999999999999 7 3444433
No 10
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=7.6e-73 Score=638.94 Aligned_cols=522 Identities=32% Similarity=0.575 Sum_probs=426.1
Q ss_pred CCCCccccccCCCCcccccCCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHH
Q 006354 58 GGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVF 137 (649)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~ 137 (649)
++.||+......++ ...+..+|++++|++.++++|+++|++++... ++. .++++++||+|+.
T Consensus 22 ~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~~~~~p~~~al~~~~~~--------~~~------~~~~~~~Ty~el~ 83 (660)
T PLN02430 22 GPVYRNLLSKKGFP----PIDSDITTAWDIFSKSVEKYPDNKMLGWRRIV--------DGK------VGPYMWKTYKEVY 83 (660)
T ss_pred CCcccccccccccc----CCCCCCCCHHHHHHHHHHhCCCCceEEEEecC--------CCC------CCCcEEEEHHHHH
Confidence 56666654333321 12356789999999999999999999876321 222 2456789999999
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhH-HHH
Q 006354 138 DRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-KKL 216 (649)
Q Consensus 138 ~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-~~l 216 (649)
++++++|++|.++|+++||+|+|+++|+++|+++++||+++|+++||+++.++++++.+++++++++++|++.... ..+
T Consensus 84 ~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 163 (660)
T PLN02430 84 EEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELL 163 (660)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987643 333
Q ss_pred HHhhccCCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEec
Q 006354 217 SAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMIT 296 (649)
Q Consensus 217 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~t 296 (649)
.......+.++.+|.+++....... .....+....+|+++...+...........++|+++|+|||||||.||||++|
T Consensus 164 ~~~~~~~~~l~~ii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lt 241 (660)
T PLN02430 164 EPDCKSAKRLKAIVSFTSVTEEESD--KASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLT 241 (660)
T ss_pred hhhcccCCCceEEEEECCCChHHhh--hhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEee
Confidence 3333345567788887643221100 00011345678888876654433333445789999999999999999999999
Q ss_pred hHHHHHHHHHHHhhC----CCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeC--CcccccccchhhccCcccccee
Q 006354 297 HGNIVATAAAIKTLI----PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYG--STLTMTDTSSKIKKGTKGDVSV 370 (649)
Q Consensus 297 h~~l~~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~--~~~~l~~~~~~~~~~~~~~i~~ 370 (649)
|+|+++.+.+..... ..++++|++++++|++|.++....+.++..|+++++. ++..+.+. +++
T Consensus 242 h~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~~~~~l~~~-----------l~~ 310 (660)
T PLN02430 242 HEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHGDLNALRDD-----------LME 310 (660)
T ss_pred cHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCChhhHHHH-----------HHH
Confidence 999998877654321 1467889999999999999988767788999999873 34445554 899
Q ss_pred ecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEE
Q 006354 371 LKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFM 450 (649)
Q Consensus 371 ~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i 450 (649)
++||++.++|.+|+.+.+.+.......+.+++.+|+++.+.+...+..... ....+++++.++++++++.+|++||.+
T Consensus 311 ~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~l~~~~i~~~~G~~lr~~ 388 (660)
T PLN02430 311 LKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYS--HKKASPMADFLAFRKVKAKLGGRLRLL 388 (660)
T ss_pred hCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCC--CCCcchhHHHHHHHHHHHHhCCeEEEE
Confidence 999999999999999999888877777888999999999999887753221 123467889999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhcCCccccccCcccccccccccCCCC-CCCCccCCCcccceEEEEecCCCCcccCCCCCCccE
Q 006354 451 ICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGE 529 (649)
Q Consensus 451 ~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GE 529 (649)
++||+++++++.++++...+++++++||+||+++..+.....+ ...+++|+|.|+++++++|.++.++.. .+.++.||
T Consensus 389 ~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~-~~~~~~GE 467 (660)
T PLN02430 389 ISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDP-LGEPPRGE 467 (660)
T ss_pred EECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCccc-CCCCCcce
Confidence 9999999999988887654578999999999988776554433 346899999999999999865555432 45567899
Q ss_pred EEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCccc
Q 006354 530 IVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLL 609 (649)
Q Consensus 530 l~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V 609 (649)
|+|+|++++.|||++|+.|++.| .+ |||+|||+|++|+||+|+|+||+||+||+++|++|+|.+||++|.+||.|
T Consensus 468 i~vrg~~v~~GY~~~~e~t~~~~---~d--Gw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V 542 (660)
T PLN02430 468 ICVRGKCLFSGYYKNPELTEEVM---KD--GWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIV 542 (660)
T ss_pred EEecCCCccccccCChHHhhhhh---hc--cceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCe
Confidence 99999999999999999999998 56 89999999999999999999999999998789999999999999999999
Q ss_pred ccceEEEecC
Q 006354 610 FHHIRLWRNG 619 (649)
Q Consensus 610 ~~~~~V~g~~ 619 (649)
. +|+|+|+.
T Consensus 543 ~-~~~V~G~~ 551 (660)
T PLN02430 543 E-DIWVYGDS 551 (660)
T ss_pred e-EEEEEecC
Confidence 9 99999976
No 11
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=4.4e-70 Score=541.21 Aligned_cols=454 Identities=23% Similarity=0.313 Sum_probs=390.4
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..|+.++++-.+++-||+.|+++-. .|. ++||+|+.+.++.+|++|.++|+++||||+|
T Consensus 49 ~~Tigq~l~~~t~~v~dkea~Vf~~----------eg~-----------R~Tf~~~~~ev~slAaGll~lGL~kGDrVgv 107 (596)
T KOG1177|consen 49 SETIGQLLETTTERVPDKEAAVFDH----------EGI-----------RLTFSEFVSEVESLAAGLLSLGLKKGDRVGV 107 (596)
T ss_pred cccHHHHHHHHhhccCcceEEEEee----------ccc-----------hhhHHHHHHHHHHHHhhHHhhcCCCCCEEEE
Confidence 3799999999999999999999854 444 5899999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchh-----HHHHHHhh-------------cc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ-----LKKLSAVS-------------SS 222 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~l~~~~-------------~~ 222 (649)
+.||+.+|+..+|||.++|.+.|++||.+...++++.|++.+++++|+...+ .+.+.++. +.
T Consensus 108 wgpN~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~ 187 (596)
T KOG1177|consen 108 WGPNSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSEL 187 (596)
T ss_pred ecCChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccc
Confidence 9999999999999999999999999999999999999999999999986543 23333322 24
Q ss_pred CCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCC-----CCCCCCCCeEEEEeecCCCCCcceEEech
Q 006354 223 LKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVD-----PSLPSQNGVAVIMYTSGSTGLPKGVMITH 297 (649)
Q Consensus 223 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~i~~TSGSTG~PKgV~~th 297 (649)
+|.+.++|..+++.. -...+.++|+...+...... .....|+|++.|.|||||||.|||+.+||
T Consensus 188 lp~lthvi~~~ed~~-----------~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH 256 (596)
T KOG1177|consen 188 LPELTHVILADEDHP-----------LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSH 256 (596)
T ss_pred cccceEEEecCCCCc-----------CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeeh
Confidence 678888888774432 23567788887766553221 24457899999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEe----CCcccccccchhhccCccccceeec
Q 006354 298 GNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGY----GSTLTMTDTSSKIKKGTKGDVSVLK 372 (649)
Q Consensus 298 ~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~----~~~~~l~~~~~~~~~~~~~~i~~~~ 372 (649)
.|++++.......+ ++.++++++...|++|.+|... .+.+|..|+++++ ++|...++. |++++
T Consensus 257 ~~~~Nna~~vg~r~-g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqa-----------i~~ek 324 (596)
T KOG1177|consen 257 YNFLNNARAVGARA-GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQA-----------ISNEK 324 (596)
T ss_pred hhhhhhHHHHHHHh-CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHH-----------HHhhc
Confidence 99999999999998 9999999999999999999654 8899999999999 555555555 99999
Q ss_pred ceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEe
Q 006354 373 PTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMIC 452 (649)
Q Consensus 373 ~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~ 452 (649)
+|.++++|+++..+++.... .++..+++|.++.
T Consensus 325 cT~l~gtPtM~~Dlln~~~~-----------------------------------------------~~~~~s~lr~~vi 357 (596)
T KOG1177|consen 325 CTTLYGTPTMFVDLLNIPQK-----------------------------------------------QQVDLSSLRKGVI 357 (596)
T ss_pred eEEEecChHHHHHHhcchhh-----------------------------------------------ccCchhhhhhhee
Confidence 99999999999988864322 2223358999999
Q ss_pred cCCCCCHHHHHHHHhhcCC-ccccccCcccccccccccCCCCC---CCCccCCCcccceEEEEecCCCCcccCCCCCCcc
Q 006354 453 GGAPLSADSQRFINICMGA-PIGQAYGLTETCAGSTFSEWDDP---SVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRG 528 (649)
Q Consensus 453 gG~~l~~~~~~~~~~~~~~-~l~~~YG~TE~~~~~~~~~~~~~---~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~G 528 (649)
||+++|+++.+.+...++. .+...||+||++...+.+...+. +..++|+.+++.+..|+| ..+.. .+.|..|
T Consensus 358 gGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~---v~~~~~G 433 (596)
T KOG1177|consen 358 GGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSE---VPLGTKG 433 (596)
T ss_pred CCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCc---cccCCCc
Confidence 9999999999999887764 47789999999988887766554 348999999999999999 55543 5778889
Q ss_pred EEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcc
Q 006354 529 EIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPL 608 (649)
Q Consensus 529 El~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~ 608 (649)
|||+||++++.|||+++++|+++.. .| +||+|||+|.+|++|+++|+||.+|+|+ ++|++|+|.|||+.|.+||.
T Consensus 434 el~iRGY~tMl~Ywg~~~kT~eti~--~d--rW~~TGDi~~m~enG~i~iVGRskdmI~-rGGENVyP~ElE~fL~~hp~ 508 (596)
T KOG1177|consen 434 ELLIRGYSTMLGYWGEEEKTKETIG--ND--RWYDTGDIAVMDENGTIEIVGRSKDMII-RGGENVYPTELEDFLNKHPL 508 (596)
T ss_pred eEEEEechhheeecCCcccchhhcc--cc--cceecCceEEEcCCCcEEEEEcccCeEE-eCCcccChHHHHHHHhhCCC
Confidence 9999999999999999999999876 56 9999999999999999999999999999 69999999999999999999
Q ss_pred cccceEEEecCCCCcccchhhhhhhhh
Q 006354 609 LFHHIRLWRNGPMKLASSTKIFQSCVT 635 (649)
Q Consensus 609 V~~~~~V~g~~~~~~~~~~~~~~~~~~ 635 (649)
|. ++.|+|++|...|+.+.+.+.+.+
T Consensus 509 V~-~a~VVGV~D~R~GE~VCA~vRLqe 534 (596)
T KOG1177|consen 509 VK-EAHVVGVPDERLGEEVCACVRLQE 534 (596)
T ss_pred ee-eEEEEccCCCcccceEEEEEEeec
Confidence 99 999999999999988766655543
No 12
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-69 Score=575.78 Aligned_cols=428 Identities=26% Similarity=0.372 Sum_probs=361.4
Q ss_pred EEeHHHHHHHHHHHHHHHHHCC--CCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEE
Q 006354 130 WQTYGEVFDRACSFASGLVNFG--HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 130 ~~TY~eL~~~~~~lA~~L~~~G--v~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (649)
.+||+|+.+++.++|.+|.++| +++||+|++++||+++++.+++||+++|+++.|++|.+.+.++.+.+++++++++|
T Consensus 45 ~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif 124 (537)
T KOG1176|consen 45 ELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIF 124 (537)
T ss_pred EEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEE
Confidence 7999999999999999999875 89999999999999999999999999999999999999999999999999999999
Q ss_pred ECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCCCceEee-hHHHHhcCCCCCCCCCCCCCCCeEEEEeecCC
Q 006354 208 CDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSS-FSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGS 286 (649)
Q Consensus 208 ~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGS 286 (649)
++....+++.++...+. ..++.+....... .........+ +..+...+.... ..+.+.+|++.|.|||||
T Consensus 125 ~d~~~~~~i~~~~~~~~--~~i~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGT 195 (537)
T KOG1176|consen 125 VDEDFYDKISEATSKLA--LKIIVLTGDEGVI-----SISDLVEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGT 195 (537)
T ss_pred EcCchHHHHHHHHhhcC--CceEEEecccCcc-----ccccccccccchhhccccCCCcc--cccCCCCCeEEEecCCCC
Confidence 99999999988776555 4444444331100 0000011111 333333322222 455677999999999999
Q ss_pred CCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHHHHHH-HHhCceEEe---CCcccccccchhhcc
Q 006354 287 TGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIM-LCAGCAIGY---GSTLTMTDTSSKIKK 362 (649)
Q Consensus 287 TG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~-l~~G~~l~~---~~~~~l~~~~~~~~~ 362 (649)
||.||||++||++++.......... .++.+|+.++.+|++|.+|+...+.+ +..|+++++ +++..+++.
T Consensus 196 Tg~PKgV~lsHr~~~~~~~~~~~~~-~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~------ 268 (537)
T KOG1176|consen 196 TGLPKGVVLSHRNLIANTLSIKIGW-ELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDL------ 268 (537)
T ss_pred CCCCceEEEecHHHHHHHHHhhhcc-cCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHH------
Confidence 9999999999999999988777666 77779999999999999999997775 455555555 566667776
Q ss_pred CccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHH
Q 006354 363 GTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAV 442 (649)
Q Consensus 363 ~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (649)
+++|++|+++++|.++..+++.... ...
T Consensus 269 -----i~kykvt~~~~vP~~~~~l~~~p~~-----------------------------------------------~~~ 296 (537)
T KOG1176|consen 269 -----IEKYKVTHLFLVPPVLNMLAKSPIV-----------------------------------------------KKY 296 (537)
T ss_pred -----HHHhCEEEEEcChHHHHHHhcCCcc-----------------------------------------------Ccc
Confidence 9999999999999999999875311 111
Q ss_pred hCCceEEEEecCCCCCHHHHHHHHhhcC-CccccccCcccccccccccCCCCC-CCCccCCCcccceEEEEecCCCCccc
Q 006354 443 LGGRIRFMICGGAPLSADSQRFINICMG-APIGQAYGLTETCAGSTFSEWDDP-SVGRVGPPVPCCYIKLVSWDEGGYKT 520 (649)
Q Consensus 443 ~g~~Lr~i~~gG~~l~~~~~~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~~~~-~~~~vG~p~p~~~v~i~d~~~~~~~~ 520 (649)
..+++|.+++||+++++++.+.+++.++ ..+.++||+||+++.++.+...+. .++++|+++++++++|.+ +++..
T Consensus 297 ~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~-e~g~~-- 373 (537)
T KOG1176|consen 297 DLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLD-ETGVS-- 373 (537)
T ss_pred cCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccceEEEeeC-CCCCC--
Confidence 2369999999999999999999999997 889999999999988887776664 789999999988888887 66654
Q ss_pred CCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhh
Q 006354 521 SDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIP 600 (649)
Q Consensus 521 ~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE 600 (649)
+++++.||||++|+.++.||++||++|++.|. .+ |||+|||+|++|+||+|+|+||++|+||. +|++|+|.|||
T Consensus 374 -l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~--~~--GW~~TGDiGy~D~DG~l~IvdR~KdlIk~-~G~qv~P~EiE 447 (537)
T KOG1176|consen 374 -LGPNQTGEICVRGPQVMKGYLKNPEATKEAFD--DD--GWFHTGDLGYFDEDGYLYIVDRSKDLIKY-GGEQVSPAEIE 447 (537)
T ss_pred -CCCCCceEEEEECcccchhhcCChHHHHhhcc--cC--CccccCceEEEcCCCeEEEecchhhheee-CCEEeCHHHHH
Confidence 78999999999999999999999999999997 55 89999999999999999999999999997 69999999999
Q ss_pred hHhccCcccccceEEEecCCCCcccchhhhhhhhh
Q 006354 601 STTTVLPLLFHHIRLWRNGPMKLASSTKIFQSCVT 635 (649)
Q Consensus 601 ~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~~~~~ 635 (649)
++|.+||.|. ||+|||.+|+..|+...+++..++
T Consensus 448 ~vL~~hP~V~-eaaVvgipDe~~Ge~p~A~VV~k~ 481 (537)
T KOG1176|consen 448 AVLLTHPDVL-EAAVVGIPDEVWGETPAAFVVLKK 481 (537)
T ss_pred HHHHhCCCcc-EEEEEcccccccCCcceEEEEecC
Confidence 9999999999 999999999999999888877764
No 13
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.9e-67 Score=580.05 Aligned_cols=455 Identities=29% Similarity=0.408 Sum_probs=377.7
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q 006354 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (649)
Q Consensus 80 ~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~ 159 (649)
...++.++++++++++|+++|+.+. +. . ..+||+||.++++++|+.|++.|+++||+|+
T Consensus 9 ~~~~~~~~l~~~a~~~~~~~a~~~~------------~~-------~--~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVa 67 (534)
T COG0318 9 AELTLASLLERAARRNPDRPALIFL------------GR-------G--GRLTYRELDRRANRLAAALQALGVKPGDRVA 67 (534)
T ss_pred ccccHHHHHHHHHHhCCCceEEEEc------------CC-------C--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 3479999999999999999999973 32 0 1499999999999999999999999999999
Q ss_pred EEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCc
Q 006354 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (649)
Q Consensus 160 i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~ 239 (649)
|+++|+++++++++||+++|++++|++|.+.+.++.+++++++++.++++.+..+.+..+....+....+..........
T Consensus 68 il~~N~~e~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (534)
T COG0318 68 ILLPNSPEFLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRL 147 (534)
T ss_pred EECCCCHHHHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccc
Confidence 99999999999999999999999999999999999999999999999999885555555544433333333222111100
Q ss_pred cCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCC--CCCC
Q 006354 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN--PGRS 317 (649)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~--~~~~ 317 (649)
. .+++++..............+++|+|+|+|||||||.||||++||+|++.........+ . ++++
T Consensus 148 -----------~-~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~-~~~~~~~ 214 (534)
T COG0318 148 -----------P-ITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAAL-GGGLTPD 214 (534)
T ss_pred -----------c-ccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHh-cccCCCC
Confidence 0 24555533322222222336799999999999999999999999999999998888888 6 8999
Q ss_pred cEEEEccChHHHHHHHHHHH-HHHhCceEEeCC-----cccccccchhhccCccccceeecceEEEechHHHHHHHHHHH
Q 006354 318 DVYLAYLPLAHVLELAAESI-MLCAGCAIGYGS-----TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (649)
Q Consensus 318 d~~l~~~pl~h~~~~~~~~~-~l~~G~~l~~~~-----~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 391 (649)
|++++.+|++|++|+...+. +++.|+++++.. +..+... +.++++|++.++|+++..++.+..
T Consensus 215 d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~-----------i~~~~~t~~~~vPt~~~~ll~~~~ 283 (534)
T COG0318 215 DVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWL-----------IEKYKVTVLSGVPTFLRELLDNPE 283 (534)
T ss_pred ceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHH-----------HHHhcceEEecchHHHHHHHhCCc
Confidence 99999999999999998555 599999998844 3334444 888889999999999999877532
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCC-ceEEEEecCCCCCHHHHHHHHhhcC
Q 006354 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGG-RIRFMICGGAPLSADSQRFINICMG 470 (649)
Q Consensus 392 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~Lr~i~~gG~~l~~~~~~~~~~~~~ 470 (649)
..... .+ +||.+++||+++++++.+.+++.++
T Consensus 284 ~~~~~-----------------------------------------------~~~~lr~~~~gg~~~~~~~~~~~~~~~~ 316 (534)
T COG0318 284 KDDDD-----------------------------------------------LSSSLRLVLSGGAPLPPELLERFEERFG 316 (534)
T ss_pred cCccc-----------------------------------------------cccceEEEEecCCcCCHHHHHHHHHHhC
Confidence 21100 01 3999999999999999999999987
Q ss_pred -CccccccCcccccccccccCCCC--CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCcc
Q 006354 471 -APIGQAYGLTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGK 547 (649)
Q Consensus 471 -~~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~ 547 (649)
..+++.||+||+++.++.....+ ...+++|+|+|+++++|+|.+++.. +| |++|||+|+||+++.|||++|+.
T Consensus 317 ~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~---~p-g~vGei~irgp~v~~GY~~~pe~ 392 (534)
T COG0318 317 PIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEV---LP-GEVGEIWVRGPNVMKGYWNRPEA 392 (534)
T ss_pred CCceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCcc---CC-CCceEEEEECchhhhhhcCChHH
Confidence 47999999999998777776665 4568889999999999999555422 33 88999999999999999999999
Q ss_pred chhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccch
Q 006354 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASST 627 (649)
Q Consensus 548 t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~ 627 (649)
|++.|. .+ |||+|||+|++|+||+++|+||.+|+|+. +|++|+|.|||+++.+||.|. +|+|+|.+++..|+.+
T Consensus 393 t~~~f~--~~--gW~~TGDlg~~d~~G~l~i~gR~kd~I~~-gG~ni~p~eiE~~l~~~~~V~-~aavvgvpd~~~Ge~~ 466 (534)
T COG0318 393 TAEAFD--ED--GWLRTGDLGYVDEDGYLYIVGRLKDLIIS-GGENIYPEEIEAVLAEHPAVA-EAAVVGVPDERWGERV 466 (534)
T ss_pred HHHhhc--cC--CeeeecceEEEcCCccEEEEeccceEEEe-CCeEECHHHHHHHHHhCCCcc-eEEEEeCCCCccCceE
Confidence 999885 34 89999999999999999999999999996 699999999999999999999 9999999999999999
Q ss_pred hhhhhhhhh
Q 006354 628 KIFQSCVTK 636 (649)
Q Consensus 628 ~~~~~~~~~ 636 (649)
.++...++.
T Consensus 467 ~a~v~~~~~ 475 (534)
T COG0318 467 VAVVVLKPG 475 (534)
T ss_pred EEEEEEcCC
Confidence 888887643
No 14
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.2e-67 Score=560.39 Aligned_cols=452 Identities=19% Similarity=0.235 Sum_probs=367.3
Q ss_pred HHHHHHHHh-CCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEcc
Q 006354 86 ALFEQSCKS-HPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAILAE 163 (649)
Q Consensus 86 ~~~~~~a~~-~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~~ 163 (649)
..++++.+. .+|+.|+++.. . .+..+.+||+||.++++++|+.|++ .|+ +||||+|++|
T Consensus 13 n~~dr~~~~~~~~~~aii~~~------------e------~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp 73 (528)
T COG0365 13 NALDRHLEADRPDDTAIIFDG------------E------DGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMP 73 (528)
T ss_pred hhhhhhhhccCCCceEEEEEc------------C------CCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcC
Confidence 356666653 47899999852 1 1111679999999999999999987 578 9999999999
Q ss_pred CCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhc--cCC-CccEEEEecCCCCCcc
Q 006354 164 TCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSS--SLK-TIKNVIYFENDGSEKD 240 (649)
Q Consensus 164 ~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~--~~~-~~~~ii~~~~~~~~~~ 240 (649)
+.+|.++++|||+++||+.+|+.+.++++.+++.+++++++++|+++....+...+.. ... .+..++++...
T Consensus 74 ~~pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~----- 148 (528)
T COG0365 74 NSPEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRL----- 148 (528)
T ss_pred CCHHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccc-----
Confidence 9999999999999999999999999999999999999999999998876654432211 000 00002322211
Q ss_pred CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEE
Q 006354 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~ 320 (649)
+ ..|+++...... ..+..+.+.+|+++|+|||||||+||||+++|++++............+.++|++
T Consensus 149 --------~---~~~~~~~~~~~~-~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~ 216 (528)
T COG0365 149 --------G---LWYDEAVEKASE-KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRF 216 (528)
T ss_pred --------c---ccHHHHhhccCC-CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEE
Confidence 1 566666654332 2234458899999999999999999999999998888777766543377799999
Q ss_pred EEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcc
Q 006354 321 LAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (649)
Q Consensus 321 l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~ 399 (649)
++..++.|+.+.++ ++.+|.+|+++++++....-+ +..+++.|+++++|++++.|+.++.|.+...
T Consensus 217 w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~-----~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~-------- 283 (528)
T COG0365 217 WNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYS-----PERLWEALEKYKVTIFGTSPTFLRRLMKLGL-------- 283 (528)
T ss_pred EeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCC-----HHHHHHHHHHhCCceEeeCHHHHHHHHhcCC--------
Confidence 99999999999988 788999999998832221111 1223333999999999999999999976421
Q ss_pred hhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCc
Q 006354 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGL 479 (649)
Q Consensus 400 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~ 479 (649)
.++.++++||.+.+.||||++++.+++.+.+|++|.+.||.
T Consensus 284 ---------------------------------------~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gq 324 (528)
T COG0365 284 ---------------------------------------GEPYDLSSLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQ 324 (528)
T ss_pred ---------------------------------------cccccchhheeeeccCCCCCHHHHHHHHHHhCCCEeccccc
Confidence 12334469999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccc--cccccccCCCccchhhhccCCC
Q 006354 480 TETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF--NVTAGYFNNPGKTSEVYKVDER 557 (649)
Q Consensus 480 TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~--~v~~gY~~~~~~t~~~f~~~~~ 557 (649)
||++.+.....+ ....++.|+|+||+++.|+| ++++. +++++ |+|+|+.+ +++++||+||+.+.++|. +
T Consensus 325 TEtg~~~~~~~~-~~~~g~~g~p~pG~~~~vvd-d~g~~---~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~---~ 395 (528)
T COG0365 325 TETGMGFIAGRP-PVKNGSSGLPLPGYAVRRVD-DEGNP---VPPGV-GELVVRLPWPGMALTYWNDPERYKEAYF---G 395 (528)
T ss_pred cccCccccCCCC-CcCCCCCCCCCCCceeEEEC-CCCCc---CCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHh---h
Confidence 999955544444 44556669999999999999 44654 67888 99999987 999999999999999984 3
Q ss_pred cccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhhhhhhhc
Q 006354 558 GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQSCVTKL 637 (649)
Q Consensus 558 ~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~~~~~~~ 637 (649)
+||.|||.+++|+||+++|+||.||+||++ |+||.+.|||++|.+||.|. ||+|+|.+|+..|+.+++|+.+++..
T Consensus 396 --~~y~tGD~~~~DedGy~~i~GR~DDvI~vs-G~Rig~~EvE~~l~~hP~Va-EaAvVg~pd~~kg~~v~afVvL~~g~ 471 (528)
T COG0365 396 --RWYRTGDWAERDEDGYFWLHGRSDDVIKVS-GKRIGPLEIESVLLAHPAVA-EAAVVGVPDPGKGQIVLAFVVLAAGV 471 (528)
T ss_pred --ceeecCceeEEccCCCEEEEeeccceEecc-CeeccHHHHHHHHHhCccee-eeEEEeccCCCCCcEEEEEEEecCCC
Confidence 399999999999999999999999999986 99999999999999999999 99999999999999999999888655
Q ss_pred c
Q 006354 638 R 638 (649)
Q Consensus 638 ~ 638 (649)
.
T Consensus 472 ~ 472 (528)
T COG0365 472 E 472 (528)
T ss_pred C
Confidence 3
No 15
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=7.5e-64 Score=565.26 Aligned_cols=477 Identities=21% Similarity=0.261 Sum_probs=378.2
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.|++++|+++|+++|+++|+.+... ++. ....+++||+||.++++++|+.|+++|+++||+|+++
T Consensus 25 ~t~~~~l~~~a~~~p~~~Al~~~~~---------~~~------~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~ 89 (632)
T PRK07529 25 ASTYELLSRAAARHPDAPALSFLLD---------ADP------LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFL 89 (632)
T ss_pred CCHHHHHHHHHHHCCCCceEEeecc---------cCC------CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 6899999999999999999987421 110 1223579999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch-----hHHHHHHhhccCCCccEEEEecCCC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK-----QLKKLSAVSSSLKTIKNVIYFENDG 236 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~l~~~~~~~~~~~~ii~~~~~~ 236 (649)
++|++++++++|||+++| +++|++|.++++++.+++++++++++|++.. ..+++..+....+.++.++.++...
T Consensus 90 ~~n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 168 (632)
T PRK07529 90 LPNLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLAR 168 (632)
T ss_pred CCCCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCcc
Confidence 999999999999999999 5799999999999999999999999999754 3455555556667777777765432
Q ss_pred CCccC-CCC----CCCCCceEeehHHHHhcCCCCC-CCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhh
Q 006354 237 SEKDS-GVS----GGISNWTVSSFSEVEKLGKRSP-VDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTL 310 (649)
Q Consensus 237 ~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~ 310 (649)
..... ... .......+..+.+......... .......++++++|+|||||||.||||++||+++++.+......
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~ 248 (632)
T PRK07529 169 YLPGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALL 248 (632)
T ss_pred cccccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHh
Confidence 10000 000 0001123445665554332221 12234467999999999999999999999999999988877777
Q ss_pred CCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHH
Q 006354 311 IPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (649)
Q Consensus 311 ~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 389 (649)
+ .+.++|++++.+|++|.++... ++.++..|+++++.++..+.+.. ....++..++++++|++.++|+++..+.+.
T Consensus 249 ~-~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~--~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 325 (632)
T PRK07529 249 L-GLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPG--VIANFWKIVERYRINFLSGVPTVYAALLQV 325 (632)
T ss_pred c-CCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcch--HHHHHHHHHHHhCCeEEEeHHHHHHHHHhC
Confidence 7 7889999999999999998875 67889999999997664432210 012344559999999999999999988653
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc
Q 006354 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (649)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~ 469 (649)
... ....++||.+++||+++++++.+.+++.+
T Consensus 326 ~~~------------------------------------------------~~~~~slr~v~~gg~~l~~~l~~~~~~~~ 357 (632)
T PRK07529 326 PVD------------------------------------------------GHDISSLRYALCGAAPLPVEVFRRFEAAT 357 (632)
T ss_pred ccc------------------------------------------------CCCccceEEEEEcCCCCCHHHHHHHHHHh
Confidence 110 00124899999999999999999999999
Q ss_pred CCccccccCcccccccccccCCC-CCCCCccCCCcccceEEEEecC-CCCcccCCCCCCccEEEEccccccccccCCCcc
Q 006354 470 GAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWD-EGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGK 547 (649)
Q Consensus 470 ~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~-~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~ 547 (649)
++++++.||+||++.+++..... ....+++|+|+|+++++|+..+ ++.+...|++|+.|||+|+|++++.||++++ .
T Consensus 358 g~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~-~ 436 (632)
T PRK07529 358 GVRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAA-H 436 (632)
T ss_pred CCcEeeeecccccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCc-c
Confidence 99999999999998777665543 2356899999999999997543 3433344889999999999999999999865 4
Q ss_pred chhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccch
Q 006354 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASST 627 (649)
Q Consensus 548 t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~ 627 (649)
+...|. .+ |||+|||+|++|+||++++.||.||+||+ +|++|+|.+||++|.+||+|. +|+|+|.+++..|+..
T Consensus 437 ~~~~~~--~~--gw~~TGDlg~~d~dG~l~i~GR~~d~i~~-~G~~i~p~eIE~~l~~~p~V~-~a~vvg~~d~~~ge~~ 510 (632)
T PRK07529 437 NKGLWL--ED--GWLNTGDLGRIDADGYFWLTGRAKDLIIR-GGHNIDPAAIEEALLRHPAVA-LAAAVGRPDAHAGELP 510 (632)
T ss_pred cccccc--CC--CceEcCcEEEEcCCceEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCee-EEEEEeccCCCCCcee
Confidence 556664 45 89999999999999999999999999996 699999999999999999999 9999999998888765
Q ss_pred hhhhh
Q 006354 628 KIFQS 632 (649)
Q Consensus 628 ~~~~~ 632 (649)
.++..
T Consensus 511 ~a~v~ 515 (632)
T PRK07529 511 VAYVQ 515 (632)
T ss_pred EEEEE
Confidence 55543
No 16
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=6.8e-66 Score=671.65 Aligned_cols=488 Identities=18% Similarity=0.247 Sum_probs=402.6
Q ss_pred CcccccccccCCCccceehheeeecceeEeeehhccccccccccCCCCCCCCCCccccccCCCCcccccCCCCCCCHHHH
Q 006354 8 SFDSELLTEKGSGIYGIVGAAIVALLIPVLLSMMVARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAAL 87 (649)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~ 87 (649)
+|++++|++..+..|..++..+++.+ +++ |... +.+++++...+++.+....+ ....+.+...|++++
T Consensus 3033 ~y~~~~~~~~~~~~~~~~~~~~l~~~----~~~--p~~~---~~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~l 3100 (3956)
T PRK12467 3033 SYDRQHFDAAAIERLAESFDRLLQAM----LNN--PAAR---LGELPTLAAHERRQVLHAWN---ATAAAYPSERLVHQL 3100 (3956)
T ss_pred EechhhCCHHHHHHHHHHHHHHHHHH----HhC--cCCc---hhhccCCCHHHHHHHHHhhc---cCCCCCCccccHHHH
Confidence 79999999999999999999888843 344 7776 88899999888877644333 122334455799999
Q ss_pred HHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH
Q 006354 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE 167 (649)
Q Consensus 88 ~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~ 167 (649)
|+++++++|+++|+++ +++ .+||+||.++++++|++|+++|+++|++|+|+++|+++
T Consensus 3101 ~~~~a~~~p~~~Av~~------------~~~-----------~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~ 3157 (3956)
T PRK12467 3101 IEAQVARTPEAPALVF------------GDQ-----------QLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVE 3157 (3956)
T ss_pred HHHHHHhCCCcceEee------------CCc-----------ccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHH
Confidence 9999999999999987 332 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCC
Q 006354 168 WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGI 247 (649)
Q Consensus 168 ~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~ 247 (649)
+++++|||+++|+++||+||.+|.+++.+++++++++++|++....+.+... .. ..++.++.
T Consensus 3158 ~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~----~~-~~~~~~~~------------- 3219 (3956)
T PRK12467 3158 MIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP----AG-DTALTLDR------------- 3219 (3956)
T ss_pred HHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc----cC-Cceeeecc-------------
Confidence 9999999999999999999999999999999999999999998765443211 01 11111111
Q ss_pred CCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChH
Q 006354 248 SNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLA 327 (649)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~ 327 (649)
..........+.....++++|||+|||||||.||||+++|+++.+.+.+....+ +++++|++++++|++
T Consensus 3220 ----------~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~ 3288 (3956)
T PRK12467 3220 ----------LDLNGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAY-ELDANDRVLLFMSFS 3288 (3956)
T ss_pred ----------hhhcccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhc-CCCcCCEEEEecCcc
Confidence 111111112223445789999999999999999999999999999999999888 999999999999999
Q ss_pred HHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 006354 328 HVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNI 407 (649)
Q Consensus 328 h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~ 407 (649)
|+.++..++.+|..|+++++.+ ....+ +..+...++++++|++.++|++++.+.+....
T Consensus 3289 fd~~~~~~~~~L~~G~~l~i~~-~~~~~-----~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~--------------- 3347 (3956)
T PRK12467 3289 FDGAQERFLWTLICGGCLVVRD-NDLWD-----PEELWQAIHAHRISIACFPPAYLQQFAEDAGG--------------- 3347 (3956)
T ss_pred HhHHHHHHHHHHhCCCEEEECC-cccCC-----HHHHHHHHHHcCCEEEEcCHHHHHHHHhcccc---------------
Confidence 9999988999999999999865 22222 12233449999999999999999988653110
Q ss_pred HHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccccCcccccccc
Q 006354 408 GYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTETCAGS 486 (649)
Q Consensus 408 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~ 486 (649)
...++||.+++|||++++++.+.|.+.+ ++.++|.||+||+++.+
T Consensus 3348 ----------------------------------~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 3393 (3956)
T PRK12467 3348 ----------------------------------ADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTV 3393 (3956)
T ss_pred ----------------------------------cCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeee
Confidence 0124799999999999999999888766 67899999999998877
Q ss_pred cccCCCC-----CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC---Cc
Q 006354 487 TFSEWDD-----PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE---RG 558 (649)
Q Consensus 487 ~~~~~~~-----~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~---~~ 558 (649)
+...... ....++|+|++|++++|+| ++++. +++|+.|||+|+|+++++||+|+|++|+++|..++ +|
T Consensus 3394 ~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~---vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g 3469 (3956)
T PRK12467 3394 TLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNP---VPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSG 3469 (3956)
T ss_pred EEEecccccccCCCCCCCccccCCCEEEEEC-CCCCC---CCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCC
Confidence 6543321 2237899999999999998 55543 78999999999999999999999999999998542 35
Q ss_pred ccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCC
Q 006354 559 MCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGP 620 (649)
Q Consensus 559 ~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~ 620 (649)
.+||||||+|++++||+|+|+||+||+||++ |+||+|+|||++|.+||+|. +|+|++..+
T Consensus 3470 ~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~-G~rIe~~EIE~~l~~~p~V~-~a~v~~~~~ 3529 (3956)
T PRK12467 3470 GRLYRTGDLARYRADGVIEYLGRIDHQVKIR-GFRIELGEIEARLLQHPSVR-EAVVLARDG 3529 (3956)
T ss_pred ceeeccchhheecCCCcEEEeccccceEeec-eEeecHHHHHHHHhhCcccc-eEEEEEecC
Confidence 6799999999999999999999999999995 99999999999999999999 999998753
No 17
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.2e-64 Score=567.48 Aligned_cols=483 Identities=16% Similarity=0.142 Sum_probs=363.6
Q ss_pred CCCHHHHHHHHHHh--CCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 006354 81 ASTMAALFEQSCKS--HPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (649)
Q Consensus 81 ~~tl~~~~~~~a~~--~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V 158 (649)
.++..++++++++. +|+++|+++.. ++. +..+.+||+||.++++++|+.|+++|+++||+|
T Consensus 58 ~n~~~~~l~~~~~~~~~~~~~A~~~~~----------~~~-------~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV 120 (647)
T PTZ00237 58 LNTCYNVLDIHVKNPLKRDQDALIYEC----------PYL-------KKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNV 120 (647)
T ss_pred eeHHHHHHHHhhcccCCCCceEEEEEc----------CCC-------CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 46778899888765 79999998742 111 123579999999999999999999999999999
Q ss_pred EEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch---------hHHHHHHhhccCC-CccE
Q 006354 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK---------QLKKLSAVSSSLK-TIKN 228 (649)
Q Consensus 159 ~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~---------~~~~l~~~~~~~~-~~~~ 228 (649)
+|+++|++++++++|||+++|++++|+++.++++++.++|++++++++|+++. ..+.+.++..... ....
T Consensus 121 ~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (647)
T PTZ00237 121 LIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSN 200 (647)
T ss_pred EEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCE
Confidence 99999999999999999999999999999999999999999999999999752 2233333332111 2345
Q ss_pred EEEecCCCC---CccCCCCCCCCCceEeehHHHHhcCC----CCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHH-H
Q 006354 229 VIYFENDGS---EKDSGVSGGISNWTVSSFSEVEKLGK----RSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGN-I 300 (649)
Q Consensus 229 ii~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~-l 300 (649)
++.+..... .....+...+.......|+++..... ..........++|+++|+|||||||.||||+++|++ +
T Consensus 201 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l 280 (647)
T PTZ00237 201 VITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHL 280 (647)
T ss_pred EEEEEcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHH
Confidence 554422110 00000000000012245666554221 111122445789999999999999999999999999 4
Q ss_pred HHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEech
Q 006354 301 VATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVP 380 (649)
Q Consensus 301 ~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P 380 (649)
++........+ ....+|++++..|++|+.+...++.+|..|+++++.+...+... +....++..++++++|++.++|
T Consensus 281 ~~~~~~~~~~~-~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~--~~~~~~~~~i~~~~vt~~~~~P 357 (647)
T PTZ00237 281 VGLKYYWRSII-EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNK--HIEDDLWNTIEKHKVTHTLTLP 357 (647)
T ss_pred HHHHHHHHHhc-CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCC--CchHHHHHHHHHhCeEEEEeCH
Confidence 44333334444 67778999999999998766667889999999998432111000 0012234449999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHH
Q 006354 381 AIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSAD 460 (649)
Q Consensus 381 ~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~ 460 (649)
++++.+.+........ ......++||.+++||++++++
T Consensus 358 ~~~~~l~~~~~~~~~~------------------------------------------~~~~~l~~Lr~i~~~G~~l~~~ 395 (647)
T PTZ00237 358 KTIRYLIKTDPEATII------------------------------------------RSKYDLSNLKEIWCGGEVIEES 395 (647)
T ss_pred HHHHHHHhhCcccccc------------------------------------------ccccCcchheEEEecCccCCHH
Confidence 9999887631110000 0011125899999999999999
Q ss_pred HHHHHHhhcCCccccccCcccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccc---c
Q 006354 461 SQRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF---N 536 (649)
Q Consensus 461 ~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~---~ 536 (649)
+.+++++.+|+++++.||+||+++..+..... ....+++|+|+||++++|+| +++.. +++|+.|||+|+|| +
T Consensus 396 ~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d-~~g~~---~~~ge~GEl~v~~p~~p~ 471 (647)
T PTZ00237 396 IPEYIENKLKIKSSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILS-EDGKE---LNVNEIGEVAFKLPMPPS 471 (647)
T ss_pred HHHHHHHhcCCCEEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEEC-CCCCC---CCCCCceEEEEeccCCch
Confidence 99999998999999999999998665433222 22348999999999999999 55554 67899999999986 8
Q ss_pred ccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEE
Q 006354 537 VTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLW 616 (649)
Q Consensus 537 v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~ 616 (649)
++.|||++++.|++.|.. .+ |||+|||+|++|+||+++|+||+||+||++ |+||+|.|||++|.+||.|. +|+|+
T Consensus 472 ~~~gy~~~~~~~~~~f~~-~~--g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~-G~rI~p~eIE~~l~~~p~V~-eaavv 546 (647)
T PTZ00237 472 FATTFYKNDEKFKQLFSK-FP--GYYNSGDLGFKDENGYYTIVSRSDDQIKIS-GNKVQLNTIETSILKHPLVL-ECCSI 546 (647)
T ss_pred hhCceeCCHHHHHHHHhC-CC--CEEECCcEEEECCCCeEEEEeccCCEEEEC-CEEeCHHHHHHHHHhCCCce-eeEEE
Confidence 999999999999987741 14 899999999999999999999999999985 99999999999999999999 99999
Q ss_pred ecCCCCcccchhhhhhhh
Q 006354 617 RNGPMKLASSTKIFQSCV 634 (649)
Q Consensus 617 g~~~~~~~~~~~~~~~~~ 634 (649)
|.+++..|+.+.+++.+.
T Consensus 547 g~~~~~~g~~~~a~Vv~~ 564 (647)
T PTZ00237 547 GIYDPDCYNVPIGLLVLK 564 (647)
T ss_pred eeEcCCCCCEEEEEEEec
Confidence 999998887776665443
No 18
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=5.4e-64 Score=560.39 Aligned_cols=451 Identities=21% Similarity=0.238 Sum_probs=360.4
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..|+.++|+++++++|+++|+.. +++ .+||+||.++++++|++|.++|+++||+|+|
T Consensus 6 ~~~~~~~~~~~~~~~p~~~a~~~------------~~~-----------~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v 62 (563)
T PLN02860 6 QAHICQCLTRLATLRGNAVVTIS------------GNR-----------RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAI 62 (563)
T ss_pred hhHHHHHHHHHHHhcCCceEEec------------CCc-----------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 36899999999999999999974 333 6999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhh-ccCCCccEEEEecCCCCCc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVS-SSLKTIKNVIYFENDGSEK 239 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~-~~~~~~~~ii~~~~~~~~~ 239 (649)
+++|+++++++++||+++|++++|+++.++++++.++++++++++++++.+.......+. ...+.++.++.+++.....
T Consensus 63 ~~~n~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 142 (563)
T PLN02860 63 AALNSDLYLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSV 142 (563)
T ss_pred EcCCCHHHHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCccccc
Confidence 999999999999999999999999999999999999999999999999876533333221 2334455555444321100
Q ss_pred cCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcE
Q 006354 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (649)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~ 319 (649)
.. ......+.+++...............++++++|+|||||||.||||++||++++.........+ .+.++|+
T Consensus 143 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-~~~~~d~ 215 (563)
T PLN02860 143 FI------FLNSFLTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV-GYGEDDV 215 (563)
T ss_pred cc------chhhccccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc-CCCCCCE
Confidence 00 0001112222211111111111234678999999999999999999999999998877776677 8889999
Q ss_pred EEEccChHHHHHHHHHHHHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHh
Q 006354 320 YLAYLPLAHVLELAAESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEE 396 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~ 396 (649)
++..+|++|++++...+.++..|+++++. ++..+.+. ++++++|+++++|+++..+.+.......
T Consensus 216 ~l~~~pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~-----------i~~~~vt~~~~~P~~~~~l~~~~~~~~~- 283 (563)
T PLN02860 216 YLHTAPLCHIGGLSSALAMLMVGACHVLLPKFDAKAALQA-----------IKQHNVTSMITVPAMMADLISLTRKSMT- 283 (563)
T ss_pred EEEecCchhhccHHHHHHHHHcCceEEecCCCCHHHHHHH-----------HHHhCCeeEEeChHHHHHHHHhhhhhhc-
Confidence 99999999999998888899999999884 33344444 9999999999999999988764211000
Q ss_pred hcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCcccc
Q 006354 397 KGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQ 475 (649)
Q Consensus 397 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~ 475 (649)
....++||.+++||+++++++.+.|++.+ ++++++
T Consensus 284 --------------------------------------------~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~ 319 (563)
T PLN02860 284 --------------------------------------------WKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFS 319 (563)
T ss_pred --------------------------------------------cccccceeEEEeCCCcCCHHHHHHHHHhcCCCceec
Confidence 01124899999999999999999999887 789999
Q ss_pred ccCcccccccccccCCCC-----------------------CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEE
Q 006354 476 AYGLTETCAGSTFSEWDD-----------------------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVV 532 (649)
Q Consensus 476 ~YG~TE~~~~~~~~~~~~-----------------------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v 532 (649)
.||+||++..++.....+ ....++|+|+|+++++|++.+ +|+.|||+|
T Consensus 320 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~---------~g~~Gel~v 390 (563)
T PLN02860 320 AYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE---------SSRVGRILT 390 (563)
T ss_pred CCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC---------CCceeEEEE
Confidence 999999976554332211 112478999999999999832 468999999
Q ss_pred ccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccc
Q 006354 533 GGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHH 612 (649)
Q Consensus 533 ~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~ 612 (649)
+|++++.|||++|+.|++.|. .+ |||+|||+|++|+||+++|+||.||+||+ +|++|+|.|||++|.+||+|. +
T Consensus 391 ~g~~~~~GY~~~~~~t~~~~~--~~--g~~~TGDl~~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~-~ 464 (563)
T PLN02860 391 RGPHVMLGYWGQNSETASVLS--ND--GWLDTGDIGWIDKAGNLWLIGRSNDRIKT-GGENVYPEEVEAVLSQHPGVA-S 464 (563)
T ss_pred ecCcccccccCCccccchhcc--CC--CeEEccceEEEcCCCCEEEeecccceeEE-CCEEccHHHHHHHHHhCCCcc-e
Confidence 999999999999999999886 56 89999999999999999999999999997 699999999999999999999 9
Q ss_pred eEEEecCCCCcccchhhhhh
Q 006354 613 IRLWRNGPMKLASSTKIFQS 632 (649)
Q Consensus 613 ~~V~g~~~~~~~~~~~~~~~ 632 (649)
|+|++.+++..++.+.++..
T Consensus 465 ~~v~~~~~~~~~~~~~a~v~ 484 (563)
T PLN02860 465 VVVVGVPDSRLTEMVVACVR 484 (563)
T ss_pred eEEEEEecCcCCceEEEEEE
Confidence 99999998887766655443
No 19
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=2.3e-63 Score=562.19 Aligned_cols=470 Identities=17% Similarity=0.189 Sum_probs=369.5
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
+..+++|+++++++|+++|+++.. +. .++.+.+||+||.++++++|++|+++|+++||+|+++
T Consensus 57 n~~~~~l~~~~~~~p~~~Al~~~~----------~~-------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~ 119 (625)
T TIGR02188 57 NVSYNCVDRHLEARPDKVAIIWEG----------DE-------PGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIY 119 (625)
T ss_pred EHHHHHHHHhhccCCCCeEEEEEc----------CC-------CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 567889989999999999998742 10 1334679999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchh---------HHHHHHhhccCC-CccEEEE
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---------LKKLSAVSSSLK-TIKNVIY 231 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~l~~~~~~~~-~~~~ii~ 231 (649)
++|++++++++|||+++|++++|+++.++++++.+++++++++++|+++.. .+.+.+.....+ .++.++.
T Consensus 120 ~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (625)
T TIGR02188 120 MPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLV 199 (625)
T ss_pred CCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEE
Confidence 999999999999999999999999999999999999999999999998753 233444444445 5666666
Q ss_pred ecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHH-Hhh
Q 006354 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAI-KTL 310 (649)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~-~~~ 310 (649)
++...... . .. ......++++..... ....+....++++++|+|||||||.||||+++|++++...... ...
T Consensus 200 ~~~~~~~~-~----~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~ 272 (625)
T TIGR02188 200 VRRTGNPV-P----WV-EGRDVWWHDLMAKAS-AYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYV 272 (625)
T ss_pred EcCCCCCc-C----cc-ccccccHHHHHhhcC-CCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhc
Confidence 54322110 0 00 011234555554322 1223345678999999999999999999999999987655443 334
Q ss_pred CCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHH
Q 006354 311 IPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (649)
Q Consensus 311 ~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 389 (649)
+ .+.++|++++.+|++|+.+... ++.+|..|+++++.+....... ...++..++++++|++.++|++++.+.+.
T Consensus 273 ~-~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 347 (625)
T TIGR02188 273 F-DIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPD----PGRFWEIIEKHKVTIFYTAPTAIRALMRL 347 (625)
T ss_pred c-CCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCC----hhHHHHHHHHhCCeEEEeCHHHHHHHHhc
Confidence 5 8889999999999999988654 6788999999988432111100 12233449999999999999999988763
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc
Q 006354 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (649)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~ 469 (649)
..... ++...++||.+++||+++++++.+++.+.+
T Consensus 348 ~~~~~---------------------------------------------~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~ 382 (625)
T TIGR02188 348 GDEWV---------------------------------------------KKHDLSSLRLLGSVGEPINPEAWMWYYKVV 382 (625)
T ss_pred CCccc---------------------------------------------ccCCccceeEEEEecCCCCHHHHHHHHHHc
Confidence 21100 111225899999999999999999998887
Q ss_pred C---CccccccCcccccccccccCC--CCCCCCccCCCcccceEEEEecCCCCcccCCC-CCCccEEEEcc--ccccccc
Q 006354 470 G---APIGQAYGLTETCAGSTFSEW--DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDK-PMPRGEIVVGG--FNVTAGY 541 (649)
Q Consensus 470 ~---~~l~~~YG~TE~~~~~~~~~~--~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~-~g~~GEl~v~g--~~v~~gY 541 (649)
+ +++++.||+||+++.+..... ....++++|+|++|++++|+| ++++. ++ +|+.|||+|+| |+++.||
T Consensus 383 ~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~---~~~~g~~GeL~v~~p~p~~~~gy 458 (625)
T TIGR02188 383 GKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNP---VEGPGEGGYLVIKQPWPGMLRTI 458 (625)
T ss_pred CCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCC---CCCCCCeEEEEEccCCCcccccc
Confidence 5 789999999999876554332 234568899999999999999 66654 56 88999999999 6899999
Q ss_pred cCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCC
Q 006354 542 FNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPM 621 (649)
Q Consensus 542 ~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~ 621 (649)
|++++.+.+.+....+ |||+|||+|++|+||+++|+||+||+||++ |++|+|.|||++|.+||.|. +|+|+|.+++
T Consensus 459 ~~~~~~~~~~~~~~~~--g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~-G~ri~p~eIE~~l~~~p~V~-e~~vvg~~~~ 534 (625)
T TIGR02188 459 YGDHERFVDTYFSPFP--GYYFTGDGARRDKDGYIWITGRVDDVINVS-GHRLGTAEIESALVSHPAVA-EAAVVGIPDD 534 (625)
T ss_pred cCChHHHHHHHhccCC--CEEECCceEEEcCCCcEEEEecccCEEEeC-CEEECHHHHHHHHHhCCCcc-eEEEEeeEcC
Confidence 9999988888753234 899999999999999999999999999985 99999999999999999999 9999999998
Q ss_pred Ccccchhhhhhh
Q 006354 622 KLASSTKIFQSC 633 (649)
Q Consensus 622 ~~~~~~~~~~~~ 633 (649)
..|+.+.++..+
T Consensus 535 ~~g~~~~a~vv~ 546 (625)
T TIGR02188 535 IKGQAIYAFVTL 546 (625)
T ss_pred CCCeEEEEEEEe
Confidence 877766555443
No 20
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-63 Score=553.67 Aligned_cols=445 Identities=18% Similarity=0.231 Sum_probs=367.6
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.++|+++++++||++|++. +++ .+||+||.++++++|++|++.|+++||+|+|+
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~------------~~~-----------~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~ 105 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALID------------ERG-----------TLTYAELDEQSNALARGLLALGVRAGDGVAVL 105 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEE------------CCC-----------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 4899999999999999999985 222 59999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|+++||+++.++.+++.+++++++++++|++.+..+.+..+....+.++.++.......
T Consensus 106 ~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 181 (549)
T PRK07788 106 ARNHRGFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDE---- 181 (549)
T ss_pred cCCCHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccc----
Confidence 9999999999999999999999999999999999999999999999998887777665444444444433222111
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEE
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l 321 (649)
+....+.+++++...... .+.+...++.++|+|||||||.||||+++|+++.+.+......+ .+..+|+++
T Consensus 182 -----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~ 252 (549)
T PRK07788 182 -----PSGSTDETLDDLIAGSST---APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV-PFRAGETTL 252 (549)
T ss_pred -----cCCcCcccHHHHhcCCCC---CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC-CCCcCCeEE
Confidence 001234567776654322 12233467889999999999999999999999999988887777 888999999
Q ss_pred EccChHHHHHHHHHHHHHHhCceEEe---CCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhc
Q 006354 322 AYLPLAHVLELAAESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (649)
Q Consensus 322 ~~~pl~h~~~~~~~~~~l~~G~~l~~---~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~ 398 (649)
..+|++|.+++...+.++..|+++++ +++..+.+. ++++++|++.++|+++..+.+.......
T Consensus 253 ~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~-----------i~~~~vt~~~~~P~~~~~l~~~~~~~~~--- 318 (549)
T PRK07788 253 LPAPMFHATGWAHLTLAMALGSTVVLRRRFDPEATLED-----------IAKHKATALVVVPVMLSRILDLGPEVLA--- 318 (549)
T ss_pred EccchHHHHHHHHHHHHHHhCCEEEECCCCCHHHHHHH-----------HHHhCCcEEEEHHHHHHHHHhCcccccC---
Confidence 99999999999877889999999988 344455554 9999999999999999988763221000
Q ss_pred chhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccC
Q 006354 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (649)
Q Consensus 399 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG 478 (649)
....++||.+++||+++++++.+++.+.+++++++.||
T Consensus 319 ------------------------------------------~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG 356 (549)
T PRK07788 319 ------------------------------------------KYDTSSLKIIFVSGSALSPELATRALEAFGPVLYNLYG 356 (549)
T ss_pred ------------------------------------------CCCCCceeEEEEeCCCCCHHHHHHHHHHhCccceeccC
Confidence 00114899999999999999999999989999999999
Q ss_pred cccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCC
Q 006354 479 LTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDER 557 (649)
Q Consensus 479 ~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~ 557 (649)
+||++..+...... ....+++|+|++|++++|+| +++.. ++.|+.|||+|+|+.++.||+++++. + + .+
T Consensus 357 ~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~---~~~g~~Gel~v~g~~~~~gY~~~~~~--~-~---~~ 426 (549)
T PRK07788 357 STEVAFATIATPEDLAEAPGTVGRPPKGVTVKILD-ENGNE---VPRGVVGRIFVGNGFPFEGYTDGRDK--Q-I---ID 426 (549)
T ss_pred cchhchhhccChhhhhhcCCCcccCCCCcEEEEEC-CCcCC---CCCCCeEEEEEeCCCccccccCCCcc--c-c---cC
Confidence 99988655443322 23457899999999999999 45543 67899999999999999999998875 2 2 44
Q ss_pred cccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhhh
Q 006354 558 GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQS 632 (649)
Q Consensus 558 ~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~~ 632 (649)
|||+|||+|++|+||+++|.||.||+||+ +|++|+|.+||++|.+||+|. +|+|++..++..++...++..
T Consensus 427 --g~~~TGDl~~~~~~g~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~~~V~-~~~v~~~~~~~~g~~~~a~vv 497 (549)
T PRK07788 427 --GLLSSGDVGYFDEDGLLFVDGRDDDMIVS-GGENVFPAEVEDLLAGHPDVV-EAAVIGVDDEEFGQRLRAFVV 497 (549)
T ss_pred --CceecCceEEEcCCCCEEEeccCcceEEE-CCEEECHHHHHHHHHhCCCee-EEEEECCcCcccccEEEEEEE
Confidence 89999999999999999999999999997 699999999999999999999 999999998887766655443
No 21
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=3.6e-63 Score=561.73 Aligned_cols=475 Identities=16% Similarity=0.153 Sum_probs=361.7
Q ss_pred CCHHHHHHHHHH-hCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 82 STMAALFEQSCK-SHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 82 ~tl~~~~~~~a~-~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
+....+|+++++ .+|+++|+++.. +. .+..+.+||+||.++++++|++|+++|+++||+|+|
T Consensus 88 N~~~~~l~~~~~~~~~~~~Al~~~~----------~~-------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i 150 (666)
T PLN02654 88 NICYNCLDRNVEAGNGDKIAIYWEG----------NE-------PGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVI 150 (666)
T ss_pred eHHHHHHHHhhccCCCCCEEEEEEc----------CC-------CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 455788888876 489999998731 11 123357999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHH---------HHHHhhccC----CCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLK---------KLSAVSSSL----KTIK 227 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~l~~~~~~~----~~~~ 227 (649)
+++|++++++++|||+++|++++|+++.++++++.+++++++++++|++..... .+..+.... ..+.
T Consensus 151 ~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 230 (666)
T PLN02654 151 YLPMLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVG 230 (666)
T ss_pred EcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCcc
Confidence 999999999999999999999999999999999999999999999999876421 122221111 1112
Q ss_pred EEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHH-HHH
Q 006354 228 NVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVAT-AAA 306 (649)
Q Consensus 228 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~-~~~ 306 (649)
.++............ .... ......|+++.... ....+.....++|+++|+|||||||.||||+++|++++.. ...
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~ 307 (666)
T PLN02654 231 ICLTYENQLAMKRED-TKWQ-EGRDVWWQDVVPNY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATT 307 (666)
T ss_pred EEEEecccccccccc-cccc-cCCcccHHHHhhcC-CCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHH
Confidence 222222111000000 0000 01123355544321 1112223457899999999999999999999999998654 344
Q ss_pred HHhhCCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHH
Q 006354 307 IKTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR 385 (649)
Q Consensus 307 ~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 385 (649)
....+ .++++|++++++|++|+++... ++.+|+.|+++++.+....... ...++..|+++++|+++++|++++.
T Consensus 308 ~~~~~-~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~----~~~~~~~i~~~~vt~~~~~P~~~~~ 382 (666)
T PLN02654 308 FKYAF-DYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPD----SGRCWDIVDKYKVTIFYTAPTLVRS 382 (666)
T ss_pred HHHhc-CCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCC----HHHHHHHHHHhCCeEEEeCHHHHHH
Confidence 55566 8899999999999999998765 6788999999998432211111 1223344999999999999999998
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHH
Q 006354 386 VREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFI 465 (649)
Q Consensus 386 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~ 465 (649)
|.+...... .+...++||.++++|+++++++.+++
T Consensus 383 l~~~~~~~~---------------------------------------------~~~~l~~Lr~i~~~Ge~l~~~~~~~~ 417 (666)
T PLN02654 383 LMRDGDEYV---------------------------------------------TRHSRKSLRVLGSVGEPINPSAWRWF 417 (666)
T ss_pred HHhhCcccc---------------------------------------------ccCChhheeEEEEecCCCCHHHHHHH
Confidence 876321100 01112489999999999999999999
Q ss_pred HhhcC---CccccccCcccccccccccCCC--CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcc--cccc
Q 006354 466 NICMG---APIGQAYGLTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG--FNVT 538 (649)
Q Consensus 466 ~~~~~---~~l~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g--~~v~ 538 (649)
.+.+| +++.+.||+||+++........ ...++++|+|+||++++|+| ++++. ++.++.|||+|++ |+++
T Consensus 418 ~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~---~~~~~~Gel~v~~~~p~~~ 493 (666)
T PLN02654 418 FNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKE---IEGECSGYLCVKKSWPGAF 493 (666)
T ss_pred HHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCC---CCCCCceEEEEcCCCchhh
Confidence 98887 7899999999998765543322 34568999999999999999 55554 5677889999999 7999
Q ss_pred ccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEec
Q 006354 539 AGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRN 618 (649)
Q Consensus 539 ~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~ 618 (649)
.|||+|++.+.+.|....+ |||+|||+|++|+||+++|+||+||+||++ |+||+|.|||++|.+||+|. +|+|+|.
T Consensus 494 ~gy~~~~~~~~~~~~~~~~--g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~-G~ri~p~EIE~~l~~~p~V~-eaaVvg~ 569 (666)
T PLN02654 494 RTLYGDHERYETTYFKPFA--GYYFSGDGCSRDKDGYYWLTGRVDDVINVS-GHRIGTAEVESALVSHPQCA-EAAVVGI 569 (666)
T ss_pred hhhcCChHHHHHhhhhcCC--CEEEeCceEEECCCCcEEEeeeccCeEEeC-CEEECHHHHHHHHHhCCCee-eEEEEee
Confidence 9999999999887742224 899999999999999999999999999985 99999999999999999999 9999999
Q ss_pred CCCCcccchhhhhhhh
Q 006354 619 GPMKLASSTKIFQSCV 634 (649)
Q Consensus 619 ~~~~~~~~~~~~~~~~ 634 (649)
+++..|+.+.++..+.
T Consensus 570 ~d~~~ge~~~a~Vvl~ 585 (666)
T PLN02654 570 EHEVKGQGIYAFVTLV 585 (666)
T ss_pred EcCCCCeEEEEEEEEC
Confidence 9998887776665543
No 22
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.6e-63 Score=558.12 Aligned_cols=467 Identities=18% Similarity=0.215 Sum_probs=366.2
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEc
Q 006354 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILA 162 (649)
Q Consensus 83 tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~ 162 (649)
...++|+++++++|+++|+++.+ +. .+..+.+||+||.++++++|++|+++|+++||+|+|++
T Consensus 68 ~~~~~l~~~~~~~p~~~Al~~~~----------~~-------~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~ 130 (637)
T PRK00174 68 VSYNCLDRHLKTRGDKVAIIWEG----------DD-------PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYM 130 (637)
T ss_pred HHHHHHHHhhccCCCCeEEEEEC----------CC-------CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Confidence 35778888999999999998742 10 12335799999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhH---------HHHHHhhccCCCccEEEEec
Q 006354 163 ETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL---------KKLSAVSSSLKTIKNVIYFE 233 (649)
Q Consensus 163 ~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~l~~~~~~~~~~~~ii~~~ 233 (649)
+|++++++++|||+++|++++|++|.++++++.+++++++++++|+++... +.+.......+.++.++.++
T Consensus 131 ~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (637)
T PRK00174 131 PMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVR 210 (637)
T ss_pred CCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEc
Confidence 999999999999999999999999999999999999999999999976532 33334444455667777665
Q ss_pred CCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHH-HHhhCC
Q 006354 234 NDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA-IKTLIP 312 (649)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~-~~~~~~ 312 (649)
...... ... ......++++.... ..........++|+++|+|||||||.||||+++|++++..+.. ....+
T Consensus 211 ~~~~~~-----~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~- 282 (637)
T PRK00174 211 RTGGDV-----DWV-EGRDLWWHELVAGA-SDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVF- 282 (637)
T ss_pred CCCCCc-----CcC-CCCcccHHHHHhhc-CCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhcc-
Confidence 432110 000 01123455655432 2222234456789999999999999999999999998765543 33445
Q ss_pred CCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcc-cccccchhhccCccccceeecceEEEechHHHHHHHHHH
Q 006354 313 NPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTL-TMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGV 390 (649)
Q Consensus 313 ~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~-~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~ 390 (649)
.+.++|++++.+|++|+.+... ++.+|..|+++++.+.. ...+ ...++..++++++|++.++|++++.+.+..
T Consensus 283 ~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~-----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~ 357 (637)
T PRK00174 283 DYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPD-----PGRFWEVIDKHKVTIFYTAPTAIRALMKEG 357 (637)
T ss_pred CCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCC-----hHHHHHHHHhcCCeEEeecHHHHHHHHhcC
Confidence 7888999999999999988754 77889999999883321 1111 122333499999999999999999887632
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcC
Q 006354 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG 470 (649)
Q Consensus 391 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~ 470 (649)
.... +....++||.+++||+++++++.+++.+.++
T Consensus 358 ~~~~---------------------------------------------~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~ 392 (637)
T PRK00174 358 DEHP---------------------------------------------KKYDLSSLRLLGSVGEPINPEAWEWYYKVVG 392 (637)
T ss_pred Cccc---------------------------------------------ccCCccceeEEEEeCCCCCHHHHHHHHHHhC
Confidence 1100 0111248999999999999999999988775
Q ss_pred ---CccccccCcccccccccccCCC--CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcc--ccccccccC
Q 006354 471 ---APIGQAYGLTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG--FNVTAGYFN 543 (649)
Q Consensus 471 ---~~l~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g--~~v~~gY~~ 543 (649)
+++++.||+||++..+...... ....+++|+|++|++++|+| +++.. ++.|+.|||+|+| ++++.|||+
T Consensus 393 ~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~---~~~g~~Gel~v~g~~p~~~~gy~~ 468 (637)
T PRK00174 393 GERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNP---LEGGEGGNLVIKDPWPGMMRTIYG 468 (637)
T ss_pred CCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCCC---CCCCCcEEEEEcCCCCcccccccC
Confidence 7899999999998765543322 23457899999999999999 55543 6789999999999 699999999
Q ss_pred CCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCc
Q 006354 544 NPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKL 623 (649)
Q Consensus 544 ~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~ 623 (649)
+++.+.+.+....+ |||+|||+|++|+||+++|+||+||+||++ |++|+|.|||++|.+||+|. +|+|+|.+++..
T Consensus 469 ~~~~~~~~~~~~~~--g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~-G~~v~p~eIE~~l~~~~~V~-~~~Vvg~~~~~~ 544 (637)
T PRK00174 469 DHERFVKTYFSTFK--GMYFTGDGARRDEDGYYWITGRVDDVLNVS-GHRLGTAEIESALVAHPKVA-EAAVVGRPDDIK 544 (637)
T ss_pred CHHHHHHhhhcCCC--CEEECCceEEEcCCCcEEEEEecccEEEeC-CEEECHHHHHHHHHhCCCcc-eEEEEeeEcCCC
Confidence 99988887753234 899999999999999999999999999985 99999999999999999999 999999998887
Q ss_pred ccchhhhhh
Q 006354 624 ASSTKIFQS 632 (649)
Q Consensus 624 ~~~~~~~~~ 632 (649)
|+.+.++..
T Consensus 545 g~~~~a~vv 553 (637)
T PRK00174 545 GQGIYAFVT 553 (637)
T ss_pred CeEEEEEEE
Confidence 766655443
No 23
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.6e-64 Score=656.84 Aligned_cols=491 Identities=19% Similarity=0.232 Sum_probs=402.7
Q ss_pred CcccccccccCCCccceehheeeecceeEeeehhccccccccccCCCCCCCCCCccccccCCCCcccccCCCCCCCHHHH
Q 006354 8 SFDSELLTEKGSGIYGIVGAAIVALLIPVLLSMMVARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAAL 87 (649)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~ 87 (649)
.||+++|++..+..|..++..+++.+ +++ |... +.+++++...+++.+....+ ....+++...+++++
T Consensus 1512 ~y~~~lf~~~~i~~l~~~~~~lL~~l----~~~--p~~~---~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 1579 (3956)
T PRK12467 1512 TYATDLFEASTIERLAGHWLNLLQGL----VAD--PERR---LGELDLLDEAERRQILEGWN---ATHTGYPLARLVHQL 1579 (3956)
T ss_pred EEeCCcCCHHHHHHHHHHHHHHHHHH----hhC--ccCc---eeeccccchHHhhhhHHhhc---CCccCCCccccHHHH
Confidence 79999999999999999998888844 344 7777 88899999999888765433 122334445799999
Q ss_pred HHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH
Q 006354 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE 167 (649)
Q Consensus 88 ~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~ 167 (649)
|+++++++|+++|+.+ +++ .+||+||.++++++|++|+++|+++|++|+|+++|+++
T Consensus 1580 ~~~~a~~~p~~~Av~~------------~~~-----------~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~ 1636 (3956)
T PRK12467 1580 IEDQAAATPEAVALVF------------GEQ-----------ELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLE 1636 (3956)
T ss_pred HHHHHHhCCCCeEEEe------------CCc-----------EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHH
Confidence 9999999999999986 332 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCC
Q 006354 168 WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGI 247 (649)
Q Consensus 168 ~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~ 247 (649)
+++++|||+++|+++||+||.+|.+++.+++++++++++|++......+.. ....+ ++.++...
T Consensus 1637 ~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~----~~~~~-~~~~~~~~----------- 1700 (3956)
T PRK12467 1637 MVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPL----PDGLR-SLVLDQED----------- 1700 (3956)
T ss_pred HHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCcc----ccCCc-EEEecccc-----------
Confidence 999999999999999999999999999999999999999998775443321 11111 22222110
Q ss_pred CCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChH
Q 006354 248 SNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLA 327 (649)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~ 327 (649)
++.. ......+.....++++|||+|||||||.||||+++|+++++.+.+....+ +++++|++++++|++
T Consensus 1701 ---------~~~~-~~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~ 1769 (3956)
T PRK12467 1701 ---------DWLE-GYSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAY-QLSAADVVLQFTSFA 1769 (3956)
T ss_pred ---------chhc-cCCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhc-CCCcccEEEEecCcc
Confidence 0000 01111222345689999999999999999999999999999999998888 899999999999999
Q ss_pred HHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 006354 328 HVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNI 407 (649)
Q Consensus 328 h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~ 407 (649)
|+++++.++.+|+.|+++++.++....+. ..+...++++++|++.++|++++.+.......
T Consensus 1770 fd~~~~~~~~~L~~G~~lvi~~~~~~~~~-----~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~-------------- 1830 (3956)
T PRK12467 1770 FDVSVWELFWPLINGARLVIAPPGAHRDP-----EQLIQLIERQQVTTLHFVPSMLQQLLQMDEQV-------------- 1830 (3956)
T ss_pred HHHHHHHHHHHHhCCCEEEEcChhhcCCH-----HHHHHHHHHcCCeEEECCHHHHHHHHhhcccc--------------
Confidence 99999999999999999999654332221 22333499999999999999999887531100
Q ss_pred HHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccccCcccccccc
Q 006354 408 GYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTETCAGS 486 (649)
Q Consensus 408 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~ 486 (649)
...++||.+++|||++++++.+.|.+.+ +..++|.||+||+++.+
T Consensus 1831 ----------------------------------~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~ 1876 (3956)
T PRK12467 1831 ----------------------------------EHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDV 1876 (3956)
T ss_pred ----------------------------------ccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeE
Confidence 0114899999999999999988887765 57899999999999877
Q ss_pred cccCCC-----CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCC---c
Q 006354 487 TFSEWD-----DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDER---G 558 (649)
Q Consensus 487 ~~~~~~-----~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~---~ 558 (649)
+..... .....++|+|++|++++|+| ++++. ++.|..|||+|+|+++++||+|+|+.|+++|..++. +
T Consensus 1877 t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~---vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~ 1952 (3956)
T PRK12467 1877 THWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNP---VPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVG 1952 (3956)
T ss_pred EEEeccccccccCCCCCcccccCCCEEEEEC-CCCCC---CCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCC
Confidence 654322 12347899999999999998 55443 789999999999999999999999999999975432 4
Q ss_pred ccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecC
Q 006354 559 MCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNG 619 (649)
Q Consensus 559 ~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~ 619 (649)
.+||||||+|++++||.|+|+||+||+||++ |+||+|+|||++|.+||+|. +|+|++.+
T Consensus 1953 ~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~-G~rIel~eIE~~l~~~p~V~-~a~vv~~~ 2011 (3956)
T PRK12467 1953 SRLYRTGDLARYRADGVIEYLGRIDHQVKIR-GFRIELGEIEARLREQGGVR-EAVVIAQD 2011 (3956)
T ss_pred ccceeccceEEECCCCCEEEecccCceEEeC-eEEechHHHHHHHHhCCCcc-eEEEEEec
Confidence 5799999999999999999999999999996 99999999999999999999 99999986
No 24
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=8.7e-63 Score=546.86 Aligned_cols=436 Identities=22% Similarity=0.262 Sum_probs=348.6
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..++.+.|.+.++++|+++|+... ++ +.+||+||.++++++|+.|.+. +||+|+|
T Consensus 18 ~~~~~~~~~~~~~~~p~~~a~~~~-----------~~-----------~~~Ty~el~~~~~~lA~~L~~~---~gd~Val 72 (539)
T PRK06334 18 GKTVLESFLKLCSEMTTATVCWDE-----------QL-----------GKLSYNQVRKAVIALATKVSKY---PDQHIGI 72 (539)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeC-----------CC-----------CcccHHHHHHHHHHHHHHHhhc---cCCeEEE
Confidence 378999999999999999998742 21 2589999999999999999873 8999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccC-CCccEEEEecCCCCCc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSL-KTIKNVIYFENDGSEK 239 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~-~~~~~ii~~~~~~~~~ 239 (649)
+++|++++++++|||+++|++++|+++.++.+++.++|++++++++|++.+....+.++.... .....++.+++...
T Consensus 73 ~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-- 150 (539)
T PRK06334 73 MMPASAGAYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRK-- 150 (539)
T ss_pred EcCCchHHHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhh--
Confidence 999999999999999999999999999999999999999999999999988776665543211 11113333332110
Q ss_pred cCCCCCCCCCceEeehHHHHhcC-----CC----CCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhh
Q 006354 240 DSGVSGGISNWTVSSFSEVEKLG-----KR----SPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTL 310 (649)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~ 310 (649)
...+.+..... .. .........++++|+|+|||||||.||||++||+++.+........
T Consensus 151 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~ 218 (539)
T PRK06334 151 ------------ELSFWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKF 218 (539)
T ss_pred ------------hccHHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh
Confidence 00001100000 00 0001224567999999999999999999999999999988887777
Q ss_pred CCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeC----CcccccccchhhccCccccceeecceEEEechHHHHH
Q 006354 311 IPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG----STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR 385 (649)
Q Consensus 311 ~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~----~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 385 (649)
+ .++++|++++++|++|.+++.. ++.++..|+++++. ++..+.+. |+++++|++.++|++++.
T Consensus 219 ~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~~~~ 286 (539)
T PRK06334 219 F-SPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEM-----------IDEAKVTFLGSTPVFFDY 286 (539)
T ss_pred c-CCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHH-----------HHHhCCcEEEecHHHHHH
Confidence 7 8889999999999999999865 67789999999873 33344444 999999999999999999
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHH
Q 006354 386 VREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFI 465 (649)
Q Consensus 386 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~ 465 (649)
+.+...... ...++||.+++||+++++++.+++
T Consensus 287 l~~~~~~~~-----------------------------------------------~~~~~lr~i~~gG~~l~~~~~~~~ 319 (539)
T PRK06334 287 ILKTAKKQE-----------------------------------------------SCLPSLRFVVIGGDAFKDSLYQEA 319 (539)
T ss_pred HHHhhhhcc-----------------------------------------------cccccccEEEECCccCCHHHHHHH
Confidence 876432110 011489999999999999999999
Q ss_pred Hhhc-CCccccccCcccccccccccCCCC-CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccC
Q 006354 466 NICM-GAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFN 543 (649)
Q Consensus 466 ~~~~-~~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~ 543 (649)
.+.+ ++.+++.||+||++.+++...... ...+++|+|++|++++|+|.+++.. +++|+.|||+|+|++++.|||+
T Consensus 320 ~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~---~~~g~~Gel~v~g~~~~~GY~~ 396 (539)
T PRK06334 320 LKTFPHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVP---VSSGETGLVLTRGTSLFSGYLG 396 (539)
T ss_pred HHHCCCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCcc---CCCCceEEEEEecCcccccccC
Confidence 9887 689999999999987776554332 2346899999999999998554443 7899999999999999999999
Q ss_pred CCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccc------eEEEe
Q 006354 544 NPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHH------IRLWR 617 (649)
Q Consensus 544 ~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~------~~V~g 617 (649)
+|+.+.... .++.+||+|||+|++|+||+++|+||.||+||+ +|++|+|.|||++|.+||+|. + ++|+|
T Consensus 397 ~~~~~~~~~---~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~-~G~~v~p~eIE~~l~~~~~v~-~~~~~~~~~v~~ 471 (539)
T PRK06334 397 EDFGQGFVE---LGGETWYVTGDLGYVDRHGELFLKGRLSRFVKI-GAEMVSLEALESILMEGFGQN-AADHAGPLVVCG 471 (539)
T ss_pred Cccccccee---eCCceeEECCCEEEECCCCeEEEEeccCCeEEE-CCEEECHHHHHHHHHHccCCc-cccccCceEEEc
Confidence 998754322 233489999999999999999999999999997 599999999999999999999 7 78888
Q ss_pred cCCCC
Q 006354 618 NGPMK 622 (649)
Q Consensus 618 ~~~~~ 622 (649)
.++..
T Consensus 472 ~~~~~ 476 (539)
T PRK06334 472 LPGEK 476 (539)
T ss_pred CCCCc
Confidence 77653
No 25
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=7.8e-63 Score=557.30 Aligned_cols=472 Identities=16% Similarity=0.162 Sum_probs=364.4
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
+.++++|+++++++|+++|+++.+ .. .+..+.+||+||.++++++|++|+++|+++||+|+|+
T Consensus 52 n~~~~~l~~~~~~~p~~~Al~~~~-----------~~------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~ 114 (628)
T TIGR02316 52 NLCHNALDRHLDERGEQLALVTVS-----------SE------TGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIY 114 (628)
T ss_pred eHHHHHHHHHhCcCCCCeEEEEEc-----------CC------CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 556889999999999999998742 10 1233579999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchh---------HHHHHHhhcc-CCCccEEEE
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---------LKKLSAVSSS-LKTIKNVIY 231 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~l~~~~~~-~~~~~~ii~ 231 (649)
++|++++++++|||+++|++++|+++.++++++.+++++++++++|+++.. .+.+..+... ......++.
T Consensus 115 ~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ 194 (628)
T TIGR02316 115 MPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLL 194 (628)
T ss_pred cCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999997642 2223332222 133456666
Q ss_pred ecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHH-HHHHHhh
Q 006354 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVAT-AAAIKTL 310 (649)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~-~~~~~~~ 310 (649)
++...... ... .....+++++.........+.....++++++|+|||||||.||||+++|++++.. .......
T Consensus 195 ~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~ 268 (628)
T TIGR02316 195 VDRGLAPM----RLI--PGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAI 268 (628)
T ss_pred EeCCCCCc----Ccc--cCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHh
Confidence 65321110 000 0012345665443222222223346799999999999999999999999997644 4444555
Q ss_pred CCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHH
Q 006354 311 IPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (649)
Q Consensus 311 ~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 389 (649)
+ .++++|++++.+|++|+.+... ++.+|+.|+++++.+....... ...++..++++++|+++++|++++.+.+.
T Consensus 269 ~-~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 343 (628)
T TIGR02316 269 F-GIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPD----PGVWWSIVERYGVRTMFSAPTAIRVLKKQ 343 (628)
T ss_pred c-CCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCC----HHHHHHHHHHhCCeEEEeCHHHHHHHHhc
Confidence 6 8889999999999999988654 7788999999998442211111 12233449999999999999999887653
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc
Q 006354 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (649)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~ 469 (649)
.... .+....++||.+++||+++++++.++++..+
T Consensus 344 ~~~~---------------------------------------------~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~ 378 (628)
T TIGR02316 344 DAAW---------------------------------------------LRKHDLSSLHWLFLAGEPLDEPTAHWITDGL 378 (628)
T ss_pred CCcc---------------------------------------------cccCCccceeEEEEecCCCCHHHHHHHHHHh
Confidence 1100 0111225899999999999999999999988
Q ss_pred CCccccccCcccccccccccCC----CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccc---ccccccc
Q 006354 470 GAPIGQAYGLTETCAGSTFSEW----DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF---NVTAGYF 542 (649)
Q Consensus 470 ~~~l~~~YG~TE~~~~~~~~~~----~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~---~v~~gY~ 542 (649)
+.++++.||+||++..++.... .....+++|+|+||++++|+|.++++. ++.|+.|||+|+|| +.+.|||
T Consensus 379 ~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~---~~~g~~Gel~v~gp~~~g~~~~~~ 455 (628)
T TIGR02316 379 GKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRP---CGPNEKGVLTVVPPLPPGCLSTVW 455 (628)
T ss_pred CCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCC---CCCCCcEEEEEecCCCcccccccc
Confidence 9999999999999854432221 123458899999999999999545654 67899999999998 5789999
Q ss_pred CCCccchhhhccC-CCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCC
Q 006354 543 NNPGKTSEVYKVD-ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPM 621 (649)
Q Consensus 543 ~~~~~t~~~f~~~-~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~ 621 (649)
++++.+.+.+... .+ +||+|||+|++|+||+++|+||.||+||++ |+||+|.|||++|.+||+|. +|+|+|.+++
T Consensus 456 ~~~~~~~~~~~~~~~~--~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~-G~rv~~~eIE~~l~~~p~V~-ea~Vvg~~d~ 531 (628)
T TIGR02316 456 GDDARFLKTYWSHFKR--PLYSSFDWGIRDEDGYTFILGRTDDVINVA-GHRLGTREIEESVSSHPSVA-EVAVVGVHDE 531 (628)
T ss_pred CChHHHHHhhhhcCCC--CEEECCceEEEcCCCcEEEEEcCcceEEeC-CEEeCHHHHHHHHHhCCCcc-eEEEEeeecC
Confidence 9998887765321 23 799999999999999999999999999985 99999999999999999999 9999999999
Q ss_pred Ccccchhhhhhh
Q 006354 622 KLASSTKIFQSC 633 (649)
Q Consensus 622 ~~~~~~~~~~~~ 633 (649)
..|+.+.+++.+
T Consensus 532 ~~g~~~~~~vv~ 543 (628)
T TIGR02316 532 LKGQVAVVFAIL 543 (628)
T ss_pred CCCeEEEEEEEE
Confidence 888776665543
No 26
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.9e-64 Score=662.07 Aligned_cols=492 Identities=20% Similarity=0.237 Sum_probs=403.6
Q ss_pred CcccccccccCCCccceehheeeecceeEeeehhccccccccccCCCCCCCCCCccccccCCCCcccccCCCCCCCHHHH
Q 006354 8 SFDSELLTEKGSGIYGIVGAAIVALLIPVLLSMMVARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAAL 87 (649)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~ 87 (649)
+||+++|++..+..|..++..++..+ ++. |... +..++++...+++.+....+ ....+++...+++++
T Consensus 3658 ~y~~~~~~~~~~~~l~~~f~~~L~~l----~~~--~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 3725 (4334)
T PRK05691 3658 SYDQRYFDAPTVERLLGEFKRLLLAL----VQG--FHGD---LSELPLLGEQERDFLLDGCN---RSERDYPLEQSYVRL 3725 (4334)
T ss_pred EEchhhCCHHHHHHHHHHHHHHHHHH----HhC--cCCC---hhhcCCCCHHHHHHHHHhhC---CccCCCccccCHHHH
Confidence 79999999999999999999888844 233 6666 88999998888776655433 123444556799999
Q ss_pred HHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH
Q 006354 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE 167 (649)
Q Consensus 88 ~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~ 167 (649)
|+++++++|+++|+.+. ++ .+||+||.++++++|++|+++|+++|++|+|+++++++
T Consensus 3726 ~~~~~~~~p~~~Av~~~-----------~~------------~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~ 3782 (4334)
T PRK05691 3726 FEAQVAAHPQRIAASCL-----------DQ------------QWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLD 3782 (4334)
T ss_pred HHHHHHhCCCceEEEcC-----------CC------------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH
Confidence 99999999999999874 44 49999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCc--cEEEEecCCCCCccCCCCC
Q 006354 168 WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTI--KNVIYFENDGSEKDSGVSG 245 (649)
Q Consensus 168 ~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~--~~ii~~~~~~~~~~~~~~~ 245 (649)
+++++|||+++|+++|||||.+|.+++.+++++++++++|++.........+....... ..++..
T Consensus 3783 ~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 3849 (4334)
T PRK05691 3783 LLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVW------------- 3849 (4334)
T ss_pred HHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeee-------------
Confidence 99999999999999999999999999999999999999999987665444333222111 111111
Q ss_pred CCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccC
Q 006354 246 GISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLP 325 (649)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~p 325 (649)
++..........+.....++++|||+|||||||.||||+++|+++++.+.+....+ .++++|+++++.|
T Consensus 3850 ----------~~~~~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~-~~~~~~~~~~~~s 3918 (4334)
T PRK05691 3850 ----------EEVQAGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-ALSEADVIAQTAS 3918 (4334)
T ss_pred ----------cccccccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhc-CCCccceEEEecC
Confidence 11111111111223445789999999999999999999999999999999998888 9999999999999
Q ss_pred hHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHH
Q 006354 326 LAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLF 405 (649)
Q Consensus 326 l~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~ 405 (649)
++|+.+++.++.+|..|+++++.+.....+. ..+...++++++|++.++|+++..+.......
T Consensus 3919 ~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~-----~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~~------------ 3981 (4334)
T PRK05691 3919 QSFDISVWQFLAAPLFGARVEIVPNAIAHDP-----QGLLAHVQAQGITVLESVPSLIQGMLAEDRQA------------ 3981 (4334)
T ss_pred CchhHHHHHHHHHHhCCCEEEEcCccccCCH-----HHHHHHHHHcCCeEEEeCHHHHHHHHhhcccc------------
Confidence 9999999999999999999999554332221 12333399999999999999998876421100
Q ss_pred HHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccccCcccccc
Q 006354 406 NIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTETCA 484 (649)
Q Consensus 406 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~ 484 (649)
.++||.+++|||++++++.+.|.+.. +++++|.||+|||+.
T Consensus 3982 --------------------------------------~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~ 4023 (4334)
T PRK05691 3982 --------------------------------------LDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSD 4023 (4334)
T ss_pred --------------------------------------CCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCcccee
Confidence 13799999999999999988887654 789999999999998
Q ss_pred cccccCCC----CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC---C
Q 006354 485 GSTFSEWD----DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE---R 557 (649)
Q Consensus 485 ~~~~~~~~----~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~---~ 557 (649)
.+++.... .....++|+|++|++++|+| +.+.. +|.|.+|||+|+|+++++||+|+|++|+++|..++ +
T Consensus 4024 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~---~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~ 4099 (4334)
T PRK05691 4024 DVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD-EALEL---VPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAP 4099 (4334)
T ss_pred EEEEEEcccccccCCcCCCCCccCCCEEEEEC-CCCCC---CCCCCceEEEEecccccccccCCcccchhhcccCCCCCC
Confidence 77654432 12346899999999999998 44443 78999999999999999999999999999998643 3
Q ss_pred cccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecC
Q 006354 558 GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNG 619 (649)
Q Consensus 558 ~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~ 619 (649)
+++||||||+|++++||+|+|+||+|++||++ |+||+++|||++|.++|+|. +|+|+...
T Consensus 4100 ~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~-G~riel~eIE~~l~~~~~v~-~a~v~~~~ 4159 (4334)
T PRK05691 4100 GERLYRTGDLARRRSDGVLEYVGRIDHQVKIR-GYRIELGEIEARLHEQAEVR-EAAVAVQE 4159 (4334)
T ss_pred CceeeccCcceeecCCCcEEEecccCCcEEec-eEEecHHHHHHHHHhCCCcc-EEEEEEec
Confidence 56899999999999999999999999999996 99999999999999999999 98887543
No 27
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.8e-62 Score=552.87 Aligned_cols=452 Identities=21% Similarity=0.309 Sum_probs=353.8
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..|+.++|+++++++|+++|+.+.+ . .+.++++||+||.++++++|++|.++|+++||+|+|
T Consensus 38 ~~~l~~~l~~~a~~~p~~~a~~~~~-----------~-------~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai 99 (614)
T PRK08180 38 PRRLTDRLVHWAQEAPDRVFLAERG-----------A-------DGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMI 99 (614)
T ss_pred CccHHHHHHHHHHHCCCCceeeecc-----------C-------CCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 4689999999999999999998631 1 123457999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCC-----HHHHHHHHhhcCceEEEECchh--HHHHHHhhccCCCccEEEEec
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLG-----EDALIHSLNETQVTTLICDSKQ--LKKLSAVSSSLKTIKNVIYFE 233 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~-----~~~l~~~l~~~~~~~vi~~~~~--~~~l~~~~~~~~~~~~ii~~~ 233 (649)
+++|+++|+++++||+++|+++||++|.++ .+++.+++++++++++|++... ...+..... ... .++..+
T Consensus 100 ~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~--~~~-~~i~~~ 176 (614)
T PRK08180 100 LSGNSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP--ADV-EVVAVR 176 (614)
T ss_pred ecCCCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc--CCc-eEEEec
Confidence 999999999999999999999999999998 7999999999999999998642 222222111 112 233322
Q ss_pred CCCCCccCCCCCCCCCceEeehHHHHhcCCCCC--CCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC
Q 006354 234 NDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSP--VDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI 311 (649)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~ 311 (649)
.... .....+++++........ .......++|+++|+|||||||.||||++||+++++.+......+
T Consensus 177 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~ 245 (614)
T PRK08180 177 GAVP-----------GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF 245 (614)
T ss_pred CCCC-----------CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc
Confidence 1100 011245666554321111 111234679999999999999999999999999999888877766
Q ss_pred CCCC--CCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHH
Q 006354 312 PNPG--RSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVRE 388 (649)
Q Consensus 312 ~~~~--~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~ 388 (649)
.+. .++++++++|++|.+++.. ++.+++.|+++++.+....... ...++..++++++|+++++|.++..|.+
T Consensus 246 -~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~----~~~~l~~i~~~~~t~~~~vP~~~~~l~~ 320 (614)
T PRK08180 246 -PFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGG----FDETLRNLREISPTVYFNVPKGWEMLVP 320 (614)
T ss_pred -cccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchh----HHHHHHHHHHhCCcEEechHHHHHHHHH
Confidence 443 5689999999999999765 6678999999988432100000 0112333889999999999999999877
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhh
Q 006354 389 GVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINIC 468 (649)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~ 468 (649)
...... ..++.++++||.+++||+++++++.+++++.
T Consensus 321 ~~~~~~-------------------------------------------~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~ 357 (614)
T PRK08180 321 ALERDA-------------------------------------------ALRRRFFSRLKLLFYAGAALSQDVWDRLDRV 357 (614)
T ss_pred HHHhch-------------------------------------------hhhhhhccceeEEEEccCCCCHHHHHHHHHH
Confidence 532110 0112233589999999999999999888864
Q ss_pred ----cC--CccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcccccccccc
Q 006354 469 ----MG--APIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYF 542 (649)
Q Consensus 469 ----~~--~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~ 542 (649)
+| +++++.||+||++.+++.........+++|+|+||++++|+|. +..|||+|+|++++.|||
T Consensus 358 ~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~d~-----------~~~GEi~vrg~~v~~GY~ 426 (614)
T PRK08180 358 AEATCGERIRMMTGLGMTETAPSATFTTGPLSRAGNIGLPAPGCEVKLVPV-----------GGKLEVRVKGPNVTPGYW 426 (614)
T ss_pred HHhhcCCCceeeeeecccccCCceEecccccCCCCcccCccCCcEEEEecC-----------CCCcEEEEecCccchhhc
Confidence 33 6899999999998777655444556789999999999999872 346999999999999999
Q ss_pred CCCccchhhhccCCCcccceeeCcEEEE----ccCCeEEEEecCCCeEEcCCceeee--CChhhhHhccCcccccceEEE
Q 006354 543 NNPGKTSEVYKVDERGMCWFYTGDIGQV----YPDGCLEIIDRKKDIVKLQHGEYIS--LGKIPSTTTVLPLLFHHIRLW 616 (649)
Q Consensus 543 ~~~~~t~~~f~~~~~~~~w~~TGDlg~~----~~dG~l~i~GR~dd~iki~~G~~v~--~~eIE~~l~~~p~V~~~~~V~ 616 (649)
++|+.|++.|. .+ |||+|||+|++ |+||+++|+||+||+||+++|++|+ |.|+|.++.+||.|. +|+|+
T Consensus 427 ~~p~~t~~~~~--~d--gw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~-~a~V~ 501 (614)
T PRK08180 427 RAPELTAEAFD--EE--GYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQ-DVVIT 501 (614)
T ss_pred CChhHhHhhcc--cC--CceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhh-eEEEE
Confidence 99999999986 56 89999999999 4689999999999999988899877 778889999999999 99999
Q ss_pred ecCCCCcccchh
Q 006354 617 RNGPMKLASSTK 628 (649)
Q Consensus 617 g~~~~~~~~~~~ 628 (649)
|.+++..+..+.
T Consensus 502 g~~~~~~~a~V~ 513 (614)
T PRK08180 502 GHDRDEIGLLVF 513 (614)
T ss_pred cCCCCceEEEEE
Confidence 999988775554
No 28
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-62 Score=552.17 Aligned_cols=455 Identities=22% Similarity=0.326 Sum_probs=352.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 006354 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (649)
Q Consensus 79 ~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V 158 (649)
+...++.++|+++++++||++|+.+.+ +. .+.++.+||+||.++++++|++|+++|+++||+|
T Consensus 46 ~~~~~l~~~l~~~a~~~pd~~a~~~~~-----------~~------~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V 108 (624)
T PRK12582 46 PYPRSIPHLLAKWAAEAPDRPWLAQRE-----------PG------HGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPV 108 (624)
T ss_pred CcccCHHHHHHHHHHHCCCchheeccc-----------CC------CCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 456799999999999999999998631 10 1334579999999999999999999999999999
Q ss_pred EEEccCCHHHHHHHHHHHhcCCEEEEecCCCCH-----HHHHHHHhhcCceEEEECchh-HHHHHHhhccCCCccEEEEe
Q 006354 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGE-----DALIHSLNETQVTTLICDSKQ-LKKLSAVSSSLKTIKNVIYF 232 (649)
Q Consensus 159 ~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~-----~~l~~~l~~~~~~~vi~~~~~-~~~l~~~~~~~~~~~~ii~~ 232 (649)
+++++|+++|+++++||+++|++++|++|.++. +++.+++++++++++|++... .......... ..++ ++.+
T Consensus 109 ~i~~~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~-~i~~ 186 (624)
T PRK12582 109 MILSGNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL-LDVT-VVHV 186 (624)
T ss_pred EEecCCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh-cCce-EEEE
Confidence 999999999999999999999999999999885 899999999999999998642 2222121111 1222 3333
Q ss_pred cCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCC--CCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhh
Q 006354 233 ENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPV--DPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTL 310 (649)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~ 310 (649)
+.... .....+++++......... ......++++++|+|||||||.||||++||+++++.+......
T Consensus 187 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~ 255 (624)
T PRK12582 187 TGPGE-----------GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQL 255 (624)
T ss_pred cCCCc-----------ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHh
Confidence 32111 1122445555443221111 1123467899999999999999999999999999887776555
Q ss_pred CCCCCC---CcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHH
Q 006354 311 IPNPGR---SDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRV 386 (649)
Q Consensus 311 ~~~~~~---~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 386 (649)
+ .... .+++++++|++|.+++.. ++.++..|+++++.+....... ...+...++++++|+++++|.+++.+
T Consensus 256 ~-~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~----~~~~~~~i~~~~~t~~~~vP~~~~~l 330 (624)
T PRK12582 256 R-PREPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGM----FEETIRNLREISPTVYGNVPAGYAML 330 (624)
T ss_pred c-cccCCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccch----HHHHHHHHHhcCCeEEeccCHHHHHH
Confidence 4 3333 579999999999999866 4567999999988432111100 01122337889999999999999988
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHH
Q 006354 387 REGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFIN 466 (649)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~ 466 (649)
.+...... ..+..++++||.+++||+++++++.+++.
T Consensus 331 ~~~~~~~~-------------------------------------------~~~~~~~~slr~i~~gGa~l~~~~~~~~~ 367 (624)
T PRK12582 331 AEAMEKDD-------------------------------------------ALRRSFFKNLRLMAYGGATLSDDLYERMQ 367 (624)
T ss_pred HHHHhhCH-------------------------------------------HHHHHHhhheeEEEecCCCCCHHHHHHHH
Confidence 76432110 01111235899999999999999999988
Q ss_pred hhc------CCccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcccccccc
Q 006354 467 ICM------GAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAG 540 (649)
Q Consensus 467 ~~~------~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~g 540 (649)
+.+ ++++++.||+||++.+++.......+.+++|+|+||++++|++ .|+.|||+|+|++++.|
T Consensus 368 ~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~~-----------~G~~GEl~vrg~~v~~G 436 (624)
T PRK12582 368 ALAVRTTGHRIPFYTGYGATETAPTTTGTHWDTERVGLIGLPLPGVELKLAP-----------VGDKYEVRVKGPNVTPG 436 (624)
T ss_pred HHHHhhcCCCceEEeccccccccceeecccCCCCCCCCCCcCCCCcEEEEcc-----------CCCceEEEEECCccccc
Confidence 752 3689999999999876654333445568999999999999964 46789999999999999
Q ss_pred ccCCCccchhhhccCCCcccceeeCcEEEE-c---cCCeEEEEecCCCeEEcCCceeeeCChhh--hHhccCcccccceE
Q 006354 541 YFNNPGKTSEVYKVDERGMCWFYTGDIGQV-Y---PDGCLEIIDRKKDIVKLQHGEYISLGKIP--STTTVLPLLFHHIR 614 (649)
Q Consensus 541 Y~~~~~~t~~~f~~~~~~~~w~~TGDlg~~-~---~dG~l~i~GR~dd~iki~~G~~v~~~eIE--~~l~~~p~V~~~~~ 614 (649)
||++|+.|++.|. .+ |||+|||+|++ | +||+++|+||+||+||+++|++|+|.+|| .++.+||.|. +|+
T Consensus 437 Y~~~p~~t~~~f~--~d--gw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~-~a~ 511 (624)
T PRK12582 437 YHKDPELTAAAFD--EE--GFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIH-DAV 511 (624)
T ss_pred ccCCccchhhhcC--cc--CCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcchh-eEE
Confidence 9999999999996 56 89999999998 4 46999999999999999889999999885 6889999999 999
Q ss_pred EEecCCCCcccch
Q 006354 615 LWRNGPMKLASST 627 (649)
Q Consensus 615 V~g~~~~~~~~~~ 627 (649)
|+|.+++..|+.+
T Consensus 512 VvG~~~~~~g~lv 524 (624)
T PRK12582 512 VAGQDRAFIGLLA 524 (624)
T ss_pred EEcCCCCcEEEEE
Confidence 9999999988774
No 29
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=7e-64 Score=662.75 Aligned_cols=491 Identities=19% Similarity=0.235 Sum_probs=399.9
Q ss_pred CcccccccccCCCccceehheeeecceeEeeehhccccccccccCCCCCCCCCCccccccCCCCcccccCCCCCCCHHHH
Q 006354 8 SFDSELLTEKGSGIYGIVGAAIVALLIPVLLSMMVARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAAL 87 (649)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~ 87 (649)
+|++++|+...+..|..++..++..+ +++ |... +.++++++..++..++..++ ....+++...+++++
T Consensus 1941 ~y~~~~~~~~~~~~~~~~~~~~l~~~----~~~--~~~~---~~~l~~l~~~~~~~l~~~~~---~~~~~~~~~~~~~~~ 2008 (5163)
T PRK12316 1941 SYDRGHFDAAAIERLDRHLLHLLEQM----AED--AQAA---LGELALLDAGERQRILADWD---RTPEAYPRGPGVHQR 2008 (5163)
T ss_pred ecChhhCCHHHHHHHHHHHHHHHHHH----HhC--cccc---cccccCCCHHHHHHHHHhcC---CCCCCCCCCCCHHHH
Confidence 79999999999999999999888844 334 6666 88899999888877655323 122234455699999
Q ss_pred HHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH
Q 006354 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE 167 (649)
Q Consensus 88 ~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~ 167 (649)
|+++++++|+++|+.+. ++ .+||+||.++++++|++|+++|+++|++|+|+++|+++
T Consensus 2009 ~~~~a~~~p~~~A~~~~------------~~-----------~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~ 2065 (5163)
T PRK12316 2009 IAEQAARAPEAIAVVFG------------DQ-----------HLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFE 2065 (5163)
T ss_pred HHHHHHhCCCCeEEEcC------------CC-----------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH
Confidence 99999999999999862 32 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCC
Q 006354 168 WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGI 247 (649)
Q Consensus 168 ~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~ 247 (649)
+++++|||+++|+++||+||.+|.+++.++++++++++++++.+....+.. ...+. .+.++..
T Consensus 2066 ~~~~~lAil~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~----~~~~~-~~~~~~~------------ 2128 (5163)
T PRK12316 2066 LVVALLAVLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPL----PAGVA-RLPLDRD------------ 2128 (5163)
T ss_pred HHHHHHHHHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhccc----ccccc-eEeccch------------
Confidence 999999999999999999999999999999999999999999876544321 01111 1111100
Q ss_pred CCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChH
Q 006354 248 SNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLA 327 (649)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~ 327 (649)
..+... ....+.....++++|||+|||||||.||||+++|+++.+.+.+....+ .++++|++++++|++
T Consensus 2129 --------~~~~~~--~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~ 2197 (5163)
T PRK12316 2129 --------AEWADY--PDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERY-ELSPADCELQFMSFS 2197 (5163)
T ss_pred --------hhhhcc--CccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhc-CCCCcceEEEecCch
Confidence 000000 111122345789999999999999999999999999999999998888 899999999999999
Q ss_pred HHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 006354 328 HVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNI 407 (649)
Q Consensus 328 h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~ 407 (649)
|+.++..++.+|+.|+++++.+... .+ +..+...++++++|++.++|++++.+.+......
T Consensus 2198 fd~~~~~~~~~L~~G~~~~~~~~~~-~~-----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~------------- 2258 (5163)
T PRK12316 2198 FDGAHEQWFHPLLNGARVLIRDDEL-WD-----PEQLYDEMERHGVTILDFPPVYLQQLAEHAERDG------------- 2258 (5163)
T ss_pred HHHHHHHHHHHHhCCCEEEeCCccc-CC-----HHHHHHHHHHcCCeEEEcChHHHHHHHhhhhccc-------------
Confidence 9999999999999999997743211 11 1122333999999999999999998876321100
Q ss_pred HHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccccCcccccccc
Q 006354 408 GYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTETCAGS 486 (649)
Q Consensus 408 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~ 486 (649)
..++||.+++|||++++++.+.|.+.+ +..++|.||+||++..+
T Consensus 2259 -----------------------------------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 2303 (5163)
T PRK12316 2259 -----------------------------------RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTP 2303 (5163)
T ss_pred -----------------------------------CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeee
Confidence 013799999999999999999888765 67899999999998877
Q ss_pred cccCCCCC-----CCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC---Cc
Q 006354 487 TFSEWDDP-----SVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE---RG 558 (649)
Q Consensus 487 ~~~~~~~~-----~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~---~~ 558 (649)
+....... ...++|+|++|++++|+| ++++. +++|++|||+|+|+++++||+|+|+.|+++|..++ .+
T Consensus 2304 ~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~---vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~ 2379 (5163)
T PRK12316 2304 LLWKCRPQDPCGAAYVPIGRALGNRRAYILD-ADLNL---LAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASG 2379 (5163)
T ss_pred eeeecccccccCCCcCCcccccCCCEEEEEC-CCCCC---CCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCC
Confidence 65433211 125899999999999998 44443 78999999999999999999999999999997542 24
Q ss_pred ccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCC
Q 006354 559 MCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPM 621 (649)
Q Consensus 559 ~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~ 621 (649)
.+||||||+|++++||.|+|+||+||+||++ |+||+|+|||++|.+||+|. +|+|++..+.
T Consensus 2380 ~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~-G~rie~~eIE~~l~~~~~v~-~a~v~~~~~~ 2440 (5163)
T PRK12316 2380 ERLYRTGDLARYRADGVVEYLGRIDHQVKIR-GFRIELGEIEARLQAHPAVR-EAVVVAQDGA 2440 (5163)
T ss_pred CeeEecccEEEEcCCCcEEEecCCCCeEEEc-CccCChHHHHHHHhhCcccc-eEEEEEEecC
Confidence 5899999999999999999999999999996 99999999999999999999 9999987655
No 30
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.8e-63 Score=610.38 Aligned_cols=525 Identities=17% Similarity=0.164 Sum_probs=394.3
Q ss_pred CcccccccccCCCccceehheeeecceeEeeehhccccccccccCCCCCCCCCCccccccCCCCcccccCCCC-CCCHHH
Q 006354 8 SFDSELLTEKGSGIYGIVGAAIVALLIPVLLSMMVARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKG-ASTMAA 86 (649)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~tl~~ 86 (649)
.||.++|++..+..+..++..++..+ +++ |... +.++++++..+.+.+... . ....|+. ..++++
T Consensus 175 ~y~~~lf~~~~i~~l~~~f~~lL~~~----~~~--p~~~---l~~l~~~~~~~~~~~~~~-~----~~~~~~~~~~~l~~ 240 (1389)
T TIGR03443 175 YYNSLLFSSDRITIVADQLAQLLSAA----SSN--PDEP---IGKVSLITPSQKSLLPDP-T----KDLDWSGFRGAIHD 240 (1389)
T ss_pred EEchhcCCHHHHHHHHHHHHHHHHHH----HhC--cCCc---eecccCCCHHHHhhhhcc-c----cccCcCcccCcHHH
Confidence 79999999999999998888877733 233 7777 888888877765543211 1 1112222 368999
Q ss_pred HHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH
Q 006354 87 LFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV 166 (649)
Q Consensus 87 ~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~ 166 (649)
+|+++++++|+++|+++..... +.. ...+.+||+||.++++++|++|++.|+++|++|+|+++|++
T Consensus 241 ~~~~~a~~~pd~~A~~~~~~~~-------~~~-------~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~ 306 (1389)
T TIGR03443 241 IFADNAEKHPDRTCVVETPSFL-------DPS-------SKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGV 306 (1389)
T ss_pred HHHHHHHhCCCCeEEEeccccc-------ccc-------CCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCH
Confidence 9999999999999998632000 000 11246999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchh---HHHHHHhhcc----CCCccEEEEecCCCCCc
Q 006354 167 EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---LKKLSAVSSS----LKTIKNVIYFENDGSEK 239 (649)
Q Consensus 167 ~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---~~~l~~~~~~----~~~~~~ii~~~~~~~~~ 239 (649)
++++++|||+++|+++||++|.++++++.+++++++++++|++... ...+...... ...+..+. +.+.....
T Consensus 307 ~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 385 (1389)
T TIGR03443 307 DLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALA-LQDDGSLV 385 (1389)
T ss_pred HHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEE-eccccccc
Confidence 9999999999999999999999999999999999999999987542 1111111110 01111111 11110000
Q ss_pred cCCCCCCCCCceEeehHHHHhcCC--CCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCC
Q 006354 240 DSGVSGGISNWTVSSFSEVEKLGK--RSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRS 317 (649)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~ 317 (649)
.. ... ....+...... ..........++|+|||+|||||||.||||+++|+++++.+.+....+ .+.++
T Consensus 386 ~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~ 456 (1389)
T TIGR03443 386 GG-------SLE-GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRF-GLSEN 456 (1389)
T ss_pred cc-------ccc-cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCC
Confidence 00 000 00000000000 001112234678999999999999999999999999999999888888 89999
Q ss_pred cEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhh
Q 006354 318 DVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEK 397 (649)
Q Consensus 318 d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~ 397 (649)
|++++++|++|+.++..++.+|+.|+++++.+.....+. ..+...++++++|+++++|++++.+......
T Consensus 457 d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~-----~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~----- 526 (1389)
T TIGR03443 457 DKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTP-----GRLAEWMAKYGATVTHLTPAMGQLLSAQATT----- 526 (1389)
T ss_pred CEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCH-----HHHHHHHHHhCCeEEEeCHHHHHHHHhcccc-----
Confidence 999999999999999889999999999998554332221 1233349999999999999999887542100
Q ss_pred cchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccc
Q 006354 398 GGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQA 476 (649)
Q Consensus 398 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~ 476 (649)
..++||.+++||+++++...+.+.... +++++|.
T Consensus 527 ---------------------------------------------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~ 561 (1389)
T TIGR03443 527 ---------------------------------------------PIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNM 561 (1389)
T ss_pred ---------------------------------------------cCCCccEEEEecccCCHHHHHHHHHhCCCCEEEEC
Confidence 014799999999999999988877654 7899999
Q ss_pred cCcccccccccccCCCC-----------CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCC
Q 006354 477 YGLTETCAGSTFSEWDD-----------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNP 545 (649)
Q Consensus 477 YG~TE~~~~~~~~~~~~-----------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~ 545 (649)
||+||++..++...... ....++|+|+++++++|+|.++.. ..+++|+.|||+|+|+++++||+|+|
T Consensus 562 YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~--~~~~~G~~GEL~i~G~~v~~GY~~~p 639 (1389)
T TIGR03443 562 YGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRT--QTCGVGEVGEIYVRAGGLAEGYLGLP 639 (1389)
T ss_pred ccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCC--CcCCCCCceEEEecccccchhcCCCh
Confidence 99999987766432211 123689999999999999954322 23789999999999999999999999
Q ss_pred ccchhhhccCC------------------------CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhh
Q 006354 546 GKTSEVYKVDE------------------------RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPS 601 (649)
Q Consensus 546 ~~t~~~f~~~~------------------------~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~ 601 (649)
+.|+++|..++ ++.+||+|||+|++++||.|+|+||.||+||+ +|+||+|.|||+
T Consensus 640 ~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki-~G~rI~p~eIE~ 718 (1389)
T TIGR03443 640 ELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKI-RGFRIELGEIDT 718 (1389)
T ss_pred hHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEe-CcEEecHHHHHH
Confidence 99999996321 12489999999999999999999999999998 599999999999
Q ss_pred HhccCcccccceEEEecCCCCcccchhh
Q 006354 602 TTTVLPLLFHHIRLWRNGPMKLASSTKI 629 (649)
Q Consensus 602 ~l~~~p~V~~~~~V~g~~~~~~~~~~~~ 629 (649)
+|.+||.|. +++|++..+...+..+.+
T Consensus 719 ~l~~~p~V~-~a~v~~~~~~~~~~~lva 745 (1389)
T TIGR03443 719 HLSQHPLVR-ENVTLVRRDKDEEPTLVS 745 (1389)
T ss_pred HHHhCcchh-eeEEEEeeCCCCCeEEEE
Confidence 999999999 999988766654443333
No 31
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=2.3e-63 Score=607.27 Aligned_cols=487 Identities=20% Similarity=0.232 Sum_probs=394.8
Q ss_pred CcccccccccCCCccceehheeeecceeEeeehhccccccccccCCCCCCCCCCccccccCCCCcccccCCCCCCCHHHH
Q 006354 8 SFDSELLTEKGSGIYGIVGAAIVALLIPVLLSMMVARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAAL 87 (649)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~ 87 (649)
.|++++|++..+..+...+..++..+ +++ |..+ +.++++++..+++.+...++ ...+++. .+++++
T Consensus 398 ~y~~~~f~~~~i~~l~~~~~~ll~~~----~~~--p~~~---i~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~l~~~ 463 (1296)
T PRK10252 398 LANPQRYDEATLIAHAERLKALIAQF----AAD--PALL---CGDVDILLPGEYAQLAQVNA----TAVEIPE-TTLSAL 463 (1296)
T ss_pred EEChhhCCHHHHHHHHHHHHHHHHHH----HhC--CCCC---hhhcCCCCHHHHHHHHHhcC----CCCCCCc-CCHHHH
Confidence 68889999999988888877777733 233 6666 88888888877766433333 2233333 689999
Q ss_pred HHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH
Q 006354 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE 167 (649)
Q Consensus 88 ~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~ 167 (649)
|+++++++|+++|+.+ +++ .+||+||.++++++|+.|.+.|+++||+|+|+++|+++
T Consensus 464 ~~~~~~~~p~~~Al~~------------~~~-----------~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~ 520 (1296)
T PRK10252 464 VAQQAAKTPDAPALAD------------ARY-----------QFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVF 520 (1296)
T ss_pred HHHHHHhCCCCeEEEc------------CCC-----------cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH
Confidence 9999999999999986 332 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCC
Q 006354 168 WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGI 247 (649)
Q Consensus 168 ~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~ 247 (649)
++++++||+++|++++|++|.++.+++.+++++++++++|++......+... +.+.
T Consensus 521 ~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~----~~~~-------------------- 576 (1296)
T PRK10252 521 LTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV----PDLT-------------------- 576 (1296)
T ss_pred HHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC----CCce--------------------
Confidence 9999999999999999999999999999999999999999998765443221 1111
Q ss_pred CCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChH
Q 006354 248 SNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLA 327 (649)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~ 327 (649)
...+.+.... ....+.....++++|||+|||||||.||||+++|+++++.+.+....+ ++.++|++++.+|++
T Consensus 577 ----~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~ 649 (1296)
T PRK10252 577 ----SLCYNAPLAP--QGAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHY-PLTADDVVLQKTPCS 649 (1296)
T ss_pred ----eeeccccccc--ccCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCCCEEEEeCCcc
Confidence 1111111000 001111233678999999999999999999999999999999999988 999999999999999
Q ss_pred HHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 006354 328 HVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNI 407 (649)
Q Consensus 328 h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~ 407 (649)
|+.+++.++.+|+.|+++++.++....+. ..+...++++++|++.++|+++..+..........
T Consensus 650 fd~~~~~~~~~l~~G~~l~~~~~~~~~~~-----~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~----------- 713 (1296)
T PRK10252 650 FDVSVWEFFWPFIAGAKLVMAEPEAHRDP-----LAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGAR----------- 713 (1296)
T ss_pred hhhhHHHHHHHHhCCCEEEECChhccCCH-----HHHHHHHHHcCCeEEEeCHHHHHHHHhhhcccccc-----------
Confidence 99999999999999999999654433222 22333489999999999999999887542111000
Q ss_pred HHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCccccccccc
Q 006354 408 GYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGST 487 (649)
Q Consensus 408 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~ 487 (649)
...+++|.+++||+++++++.+.|.+.++++++|.||+||++..++
T Consensus 714 ----------------------------------~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~ 759 (1296)
T PRK10252 714 ----------------------------------QSCASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVS 759 (1296)
T ss_pred ----------------------------------ccCCCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhheee
Confidence 0013799999999999999999999888999999999999988776
Q ss_pred ccCCC-------CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC--Cc
Q 006354 488 FSEWD-------DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE--RG 558 (649)
Q Consensus 488 ~~~~~-------~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~--~~ 558 (649)
..... .....++|+|++|++++|+| ++++. +++|+.|||+|+|+++++||+++|+.|+++|..++ ++
T Consensus 760 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~---~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~ 835 (1296)
T PRK10252 760 WYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRP---VPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPG 835 (1296)
T ss_pred eeecccccccccCCCCCCcccccCCCEEEEEC-CCCCC---CCCCCceEEEecccccchhhCCCcccchhhcccCCCCCC
Confidence 54332 22346899999999999998 55543 78999999999999999999999999999997543 24
Q ss_pred ccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEec
Q 006354 559 MCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRN 618 (649)
Q Consensus 559 ~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~ 618 (649)
.+||+|||+|++++||+++++||.|++||++ |++|+|.|||++|.+||+|. +|+|++.
T Consensus 836 ~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~-G~ri~~~eIE~~l~~~~~v~-~a~v~~~ 893 (1296)
T PRK10252 836 ERMYRTGDVARWLDDGAVEYLGRSDDQLKIR-GQRIELGEIDRAMQALPDVE-QAVTHAC 893 (1296)
T ss_pred CEEEecCceEEEcCCCcEEEecccCCeEEEe-eEEecHHHHHHHHHhCcccc-ceEEEEE
Confidence 5799999999999999999999999999985 99999999999999999999 9987754
No 32
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.1e-63 Score=656.61 Aligned_cols=486 Identities=19% Similarity=0.259 Sum_probs=402.8
Q ss_pred CcccccccccCCCccceehheeeecceeEeeehhccccccccccCCCCCCCCCCccccccCCCCcccccCCCCCCCHHHH
Q 006354 8 SFDSELLTEKGSGIYGIVGAAIVALLIPVLLSMMVARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAAL 87 (649)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~ 87 (649)
.||+++|++..+..|...+..++..+ ++. |... +.++++++..+++.+...++ ....+.+...+++++
T Consensus 2995 ~y~~~~~~~~~i~~l~~~f~~lL~~l----~~~--p~~~---i~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 3062 (5163)
T PRK12316 2995 TYATDLFDARTVERLARHWQNLLRGM----VEN--PQRS---VDELAMLDAEERGQLLEAWN---ATAAEYPLERGVHRL 3062 (5163)
T ss_pred EECcCCCCHHHHHHHHHHHHHHHHHH----HhC--CCCc---hhhccCCCHHHHHHHHHHhC---CCCcCCCCcCCHHHH
Confidence 79999999999999999999888844 334 6666 88899998888877654333 123344555799999
Q ss_pred HHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH
Q 006354 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE 167 (649)
Q Consensus 88 ~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~ 167 (649)
|+++++++|+++|+.+. +. .+||+||.++++++|++|+++|+++|++|+|+++++++
T Consensus 3063 ~~~~~~~~p~~~Av~~~------------~~-----------~lTY~eL~~~~~~lA~~L~~~gv~~~~~V~l~~~~s~~ 3119 (5163)
T PRK12316 3063 FEEQVERTPDAVALAFG------------EQ-----------RLSYAELNRRANRLAHRLIERGVGPDVLVGVAVERSLE 3119 (5163)
T ss_pred HHHHHHhCCCCeeEeeC------------Ce-----------EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHH
Confidence 99999999999999863 22 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCC
Q 006354 168 WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGI 247 (649)
Q Consensus 168 ~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~ 247 (649)
+++++|||+++|+++||+||.+|.+++.++++++++++++++... .+ ...... .++.++....
T Consensus 3120 ~iv~~lail~aGa~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~--~~----~~~~~~-~~~~~~~~~~---------- 3182 (5163)
T PRK12316 3120 MVVGLLAILKAGGAYVPLDPEYPEERLAYMLEDSGAQLLLSQSHL--RL----PLAQGV-QVLDLDRGDE---------- 3182 (5163)
T ss_pred HHHHHHHHHHhCceeeecCCCCcHHHHHHHHHhcCCCEEEeCccc--cC----CccCCc-cEEEeccccc----------
Confidence 999999999999999999999999999999999999999998654 11 111111 1222221100
Q ss_pred CCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChH
Q 006354 248 SNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLA 327 (649)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~ 327 (649)
......+.....++++|||+|||||||.||||+++|+++.+.+.+....+ +++++|++++++|++
T Consensus 3183 --------------~~~~~~~~~~~~~~~~ayii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~ 3247 (5163)
T PRK12316 3183 --------------NYAEANPAIRTMPENLAYVIYTSGSTGKPKGVGIRHSALSNHLCWMQQAY-GLGVGDRVLQFTTFS 3247 (5163)
T ss_pred --------------cccccCCCCCCCCCCeEEEEeCCCCCCCCCEEEEccHHHHHHHHHHHHhh-CCCcccEEEeecCcc
Confidence 00111123345789999999999999999999999999999999999988 999999999999999
Q ss_pred HHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 006354 328 HVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNI 407 (649)
Q Consensus 328 h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~ 407 (649)
|+.++..++.+|+.|+++++.++....+. ..+...++++++|++..+|+++..+.+....
T Consensus 3248 fd~~~~~i~~~L~~G~~l~~~~~~~~~~~-----~~l~~~~~~~~v~~~~~~ps~~~~l~~~~~~--------------- 3307 (5163)
T PRK12316 3248 FDVFVEELFWPLMSGARVVLAGPEDWRDP-----ALLVELINSEGVDVLHAYPSMLQAFLEEEDA--------------- 3307 (5163)
T ss_pred HHHHHHHHHHHHhCCCEEEEcChhhcCCH-----HHHHHHHHHcCCcEEEcCHHHHHHHHhcccc---------------
Confidence 99999999999999999999665443332 1223338889999999999999887653110
Q ss_pred HHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCccccccccc
Q 006354 408 GYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGST 487 (649)
Q Consensus 408 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~ 487 (649)
...+++|.+++|||++++++.++|. .+++++|.||+||+++.++
T Consensus 3308 ----------------------------------~~~~~lr~~~~gGe~l~~~~~~~~~--~~~~l~n~YG~TE~~~~~~ 3351 (5163)
T PRK12316 3308 ----------------------------------HRCTSLKRIVCGGEALPADLQQQVF--AGLPLYNLYGPTEATITVT 3351 (5163)
T ss_pred ----------------------------------ccCCcceEEEEccccCCHHHHHHHH--hCCcEeeccCCCccEeeEe
Confidence 0114899999999999999999998 4789999999999998877
Q ss_pred ccCC--CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC--Cccccee
Q 006354 488 FSEW--DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE--RGMCWFY 563 (649)
Q Consensus 488 ~~~~--~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~--~~~~w~~ 563 (649)
.... ......++|+|++|++++|+| ++++. +|+|.+|||+|+|+++++||+|+|++|+++|..++ .+.+||+
T Consensus 3352 ~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~---~p~G~~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~y~ 3427 (5163)
T PRK12316 3352 HWQCVEEGKDAVPIGRPIANRACYILD-GSLEP---VPVGALGELYLGGEGLARGYHNRPGLTAERFVPDPFVPGERLYR 3427 (5163)
T ss_pred EEeccCCCCCCCccceecCCCEEEEEC-CCCCC---CCCCCCceEEecccccchhcCCChhhchhhCCCCCCCCCCeeEe
Confidence 6543 223457999999999999999 55543 78999999999999999999999999999998542 3568999
Q ss_pred eCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCC
Q 006354 564 TGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMK 622 (649)
Q Consensus 564 TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~ 622 (649)
|||+|++++||.|+|+||+|++||++ |+||+|+|||++|.+||+|. +|+|++.....
T Consensus 3428 TGDl~~~~~dG~l~~~GR~d~qvKi~-G~rIel~eIE~~l~~~~~V~-~a~v~~~~~~~ 3484 (5163)
T PRK12316 3428 TGDLARYRADGVIEYIGRVDHQVKIR-GFRIELGEIEARLLEHPWVR-EAVVLAVDGRQ 3484 (5163)
T ss_pred cCceEEECCCCCEEEecccCCeEeeC-cEeeChHHHHHHHHhCCCcc-eEEEEEccCCe
Confidence 99999999999999999999999995 99999999999999999999 99999987443
No 33
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=6.9e-61 Score=533.90 Aligned_cols=447 Identities=21% Similarity=0.299 Sum_probs=366.5
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.|+.++|++.++.+|+++|+++.+ ++ .+.++.+||+||.++++++|++|++.|+++||+|+++
T Consensus 24 ~~l~~~l~~~a~~~p~~~A~~~~~----------~~-------~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~ 86 (547)
T PRK13295 24 RTINDDLDACVASCPDKTAVTAVR----------LG-------TGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQ 86 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEecC----------CC-------ccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 689999999999999999998632 11 1334579999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchh-----HHHHHHhhccCCCccEEEEecCCC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ-----LKKLSAVSSSLKTIKNVIYFENDG 236 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~l~~~~~~~~~~~~ii~~~~~~ 236 (649)
++|++++++++|||+++|++++|++|.++.+++.+++++++++++|++++. .+.+.++....+.++.++.++...
T Consensus 87 ~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (547)
T PRK13295 87 LPNWWEFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDG 166 (547)
T ss_pred CCCChHHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCC
Confidence 999999999999999999999999999999999999999999999998754 233444444556666666654321
Q ss_pred CCccCCCCCCCCCceEeehHHHHhcCC-------CCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHh
Q 006354 237 SEKDSGVSGGISNWTVSSFSEVEKLGK-------RSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT 309 (649)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~ 309 (649)
. .++.++..... ..........++++++|+|||||||.||||+++|++++..+.....
T Consensus 167 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~ 231 (547)
T PRK13295 167 A---------------DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAE 231 (547)
T ss_pred c---------------cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHH
Confidence 1 12333222110 0011123346789999999999999999999999999999888887
Q ss_pred hCCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHH
Q 006354 310 LIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR 385 (649)
Q Consensus 310 ~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 385 (649)
.+ .+.++|++++.+|++|..++.. ++.++..|+++++. ++..+.+. ++++++|++.++|.++..
T Consensus 232 ~~-~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-----------l~~~~vt~~~~~p~~~~~ 299 (547)
T PRK13295 232 RL-GLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAEL-----------IRTEGVTFTMASTPFLTD 299 (547)
T ss_pred Hh-CCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHH-----------HHHcCCcEEEecHHHHHH
Confidence 77 8899999999999999998765 77889999999884 33444444 999999999999999988
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHH
Q 006354 386 VREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFI 465 (649)
Q Consensus 386 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~ 465 (649)
+....... ....++||.+++||+++++++.+++
T Consensus 300 l~~~~~~~-----------------------------------------------~~~~~~l~~~~~~G~~l~~~~~~~~ 332 (547)
T PRK13295 300 LTRAVKES-----------------------------------------------GRPVSSLRTFLCAGAPIPGALVERA 332 (547)
T ss_pred HHhccccc-----------------------------------------------CCCcccceEEEEecCCCCHHHHHHH
Confidence 87532110 0012489999999999999999999
Q ss_pred HhhcCCccccccCcccccccccccCCC--CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccC
Q 006354 466 NICMGAPIGQAYGLTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFN 543 (649)
Q Consensus 466 ~~~~~~~l~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~ 543 (649)
.+.+++++++.||+||++.+++..... .....++|+|+++++++|+| +++.. ++.|+.|||+|+|++++.||++
T Consensus 333 ~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~---~~~g~~Gel~v~g~~~~~gY~~ 408 (547)
T PRK13295 333 RAALGAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVD-ADGAP---LPAGQIGRLQVRGCSNFGGYLK 408 (547)
T ss_pred HHHhCCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEEC-CCCCC---CCCCCCCeEEEEcCcccccccC
Confidence 988899999999999998766544332 22347899999999999999 44443 6789999999999999999999
Q ss_pred CCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCc
Q 006354 544 NPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKL 623 (649)
Q Consensus 544 ~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~ 623 (649)
+|+.|+.. .+ |||+|||+|++++||++++.||.||+||+ +|++|+|.+||++|.+||.|. +++|++.++...
T Consensus 409 ~~~~t~~~----~~--g~~~TGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~p~~IE~~l~~~~~v~-~~~v~~~~~~~~ 480 (547)
T PRK13295 409 RPQLNGTD----AD--GWFDTGDLARIDADGYIRISGRSKDVIIR-GGENIPVVEIEALLYRHPAIA-QVAIVAYPDERL 480 (547)
T ss_pred CccccccC----CC--CCeecceEEEEcCCceEEEEeccCCeEEE-CCEEECHHHHHHHHHhCCCee-eEEEEeeecCCC
Confidence 99998765 34 79999999999999999999999999997 599999999999999999999 999999988877
Q ss_pred ccchhhhh
Q 006354 624 ASSTKIFQ 631 (649)
Q Consensus 624 ~~~~~~~~ 631 (649)
++.+.++.
T Consensus 481 g~~~~~~v 488 (547)
T PRK13295 481 GERACAFV 488 (547)
T ss_pred CcEEEEEE
Confidence 76554443
No 34
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.5e-63 Score=482.18 Aligned_cols=449 Identities=20% Similarity=0.269 Sum_probs=387.0
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q 006354 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (649)
Q Consensus 80 ~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~ 159 (649)
...|+.+++.++|+++||++|++. |. +.+||+||.+++.++|.+|+++|+++||+|.
T Consensus 26 ~d~~l~d~L~~~A~~~pdriAv~d-------------~~----------~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vl 82 (542)
T COG1021 26 QDRTLTDILTDHAARYPDRIAVID-------------GE----------RRLSYAELDQRADRLAAGLRRLGIKPGDTVL 82 (542)
T ss_pred cCCcHHHHHHHHHhhcCCceEEec-------------Cc----------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 347999999999999999999984 43 3699999999999999999999999999999
Q ss_pred EEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch-----hHHHHHHhhccCCCccEEEEecC
Q 006354 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK-----QLKKLSAVSSSLKTIKNVIYFEN 234 (649)
Q Consensus 160 i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~l~~~~~~~~~~~~ii~~~~ 234 (649)
+-++|..+++++++|++++|+.+|.--|.+...+|.+..+.++++.+|.+.. ..+...+.....+.++++++.++
T Consensus 83 vQLpN~~ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge 162 (542)
T COG1021 83 VQLPNVAEFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGE 162 (542)
T ss_pred EECCchHHHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccC
Confidence 9999999999999999999999999999999999999999999999999764 34556667778889999998754
Q ss_pred CCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCC
Q 006354 235 DGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP 314 (649)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~ 314 (649)
.+.. ...+..+........+..+.+++++|+...+.||||.||-+..||.....++.+-.+.+ ++
T Consensus 163 ~~~~--------------~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC-~~ 227 (542)
T COG1021 163 AEHP--------------SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC-GF 227 (542)
T ss_pred CCCc--------------chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh-Cc
Confidence 3211 11122222222233334667888999999999999999999999999999999999999 99
Q ss_pred CCCcEEEEccChHHHHHHHH--HHHHHHhCceEEe---CCcccccccchhhccCccccceeecceEEEechHHHHHHHHH
Q 006354 315 GRSDVYLAYLPLAHVLELAA--ESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (649)
Q Consensus 315 ~~~d~~l~~~pl~h~~~~~~--~~~~l~~G~~l~~---~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 389 (649)
+.++++++.+|..|-+.+.. .+..++.|+++++ .+|...+.. |+++++|+...+|.+...|++.
T Consensus 228 ~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~~psp~~~F~l-----------Ierh~Vt~tALVPpla~LWlqa 296 (542)
T COG1021 228 DQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPL-----------IERHGVTVTALVPPLASLWLQA 296 (542)
T ss_pred CccceEEEecccccCCCCCCcchhheeeeccEEEECCCCCHHHHHHH-----------HHHhccceEEeccHHHHHHHHh
Confidence 99999999999999988876 6788999999999 666666666 9999999999999999988875
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc
Q 006354 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (649)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~ 469 (649)
... +..+++|||.+-+||+.+++++.+++...+
T Consensus 297 ~e~-----------------------------------------------~~~~LsSLrllQVGGarl~~~~Arrv~~~l 329 (542)
T COG1021 297 AEW-----------------------------------------------ERADLSSLRLLQVGGARLSATLARRVPAVL 329 (542)
T ss_pred hhc-----------------------------------------------ccCCchheeEEeecCcccCHHHHhhchhhh
Confidence 432 122336999999999999999999999999
Q ss_pred CCccccccCcccccccccccCCCCCC---CCccCCCc-ccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCC
Q 006354 470 GAPIGQAYGLTETCAGSTFSEWDDPS---VGRVGPPV-PCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNP 545 (649)
Q Consensus 470 ~~~l~~~YG~TE~~~~~~~~~~~~~~---~~~vG~p~-p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~ 545 (649)
||.+-+.+||.|.-+ .+...++.. ..+-|+|+ |.=+++|+| ++++. +++|+.|+|..+||...+|||+.|
T Consensus 330 gC~LQQVFGMAEGLv--nyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~p---v~pGE~G~LltRGPYTirGYyrap 403 (542)
T COG1021 330 GCQLQQVFGMAEGLV--NYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGNP---VAPGEVGELLTRGPYTIRGYYRAP 403 (542)
T ss_pred CchHHHHhhhhhhhh--cccccCCchHheeecCCCcCCCcceeEEec-CCCCC---CCCCCcceeeecCCeeeeeeccCc
Confidence 999999999999543 333333332 27889997 788999999 66655 789999999999999999999999
Q ss_pred ccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCccc
Q 006354 546 GKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLAS 625 (649)
Q Consensus 546 ~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~ 625 (649)
+.++.+|+ .+ |+|+|||+.++|+||+|.+.||.||||+ |+||+|..+|||+.|..||.|. +|++++.+|..+|+
T Consensus 404 ~HNa~aF~--a~--GFYrsGD~V~~~~dGyl~V~GR~KDQIN-RgGEKIAAeEvEn~LL~HP~V~-~AAlVampDelLGE 477 (542)
T COG1021 404 EHNARAFD--AD--GFYRSGDLVRRDPDGYLVVEGRVKDQIN-RGGEKIAAEEVENLLLRHPAVH-DAALVAMPDELLGE 477 (542)
T ss_pred hhhhhccC--cC--CceecCceeEecCCceEEEEeeehhhhc-cccchhhHHHHHHHHhhCchhh-hhhhhcCchhhcCc
Confidence 99999998 77 9999999999999999999999999999 8999999999999999999999 99999999999999
Q ss_pred chhhhhhhhhh
Q 006354 626 STKIFQSCVTK 636 (649)
Q Consensus 626 ~~~~~~~~~~~ 636 (649)
...+|...+..
T Consensus 478 ksCAfiv~~~~ 488 (542)
T COG1021 478 KSCAFIVVKEP 488 (542)
T ss_pred ceeEEEEecCC
Confidence 88887666544
No 35
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-61 Score=540.08 Aligned_cols=451 Identities=21% Similarity=0.257 Sum_probs=368.6
Q ss_pred CCCHHHHHHHHHH-hCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q 006354 81 ASTMAALFEQSCK-SHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (649)
Q Consensus 81 ~~tl~~~~~~~a~-~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~ 159 (649)
.+.++++++++++ .+|+++|+.+.+ .. ..+.+||+||.++++++|++|.++|+++||+|+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~~-----------~~--------~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~ 102 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYLD-----------AS--------RKEKYTYKELKELSNKFANVLKELGVEKGDRVF 102 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEEC-----------CC--------CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 3556789998887 479999998742 11 114699999999999999999999999999999
Q ss_pred EEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCc
Q 006354 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (649)
Q Consensus 160 i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~ 239 (649)
|+++|++++++++|||+++|++++|+++.++++++.+++++++++++|++......... ...+.++.++.+++....
T Consensus 103 i~~~n~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~- 179 (570)
T PRK04319 103 IFMPRIPELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDLPSLKHVLLVGEDVEE- 179 (570)
T ss_pred EECCCCHHHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcCCCceEEEEECCCcCC-
Confidence 99999999999999999999999999999999999999999999999999876554332 234556666665533210
Q ss_pred cCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcE
Q 006354 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (649)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~ 319 (649)
.....++.++...... ........++++++|+|||||||.||||+++|+++++.+......+ .+.++|+
T Consensus 180 ---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~~~d~ 248 (570)
T PRK04319 180 ---------GPGTLDFNALMEQASD-EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL-DLHEDDV 248 (570)
T ss_pred ---------CcCccCHHHHHhhcCC-cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc-CCCCCce
Confidence 1123455655543322 1223345678999999999999999999999999999888887777 8889999
Q ss_pred EEEccChHHHHHHHH-HHHHHHhCceEEeC----CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHH
Q 006354 320 YLAYLPLAHVLELAA-ESIMLCAGCAIGYG----STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKV 394 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~----~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 394 (649)
+++..|++|..+... ++.++..|+++++. ++..+.+. ++++++|+++++|.+++.+........
T Consensus 249 ~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~~~~l~~~~~~~~ 317 (570)
T PRK04319 249 YWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRI-----------LEDYKVTVWYTAPTAIRMLMGAGDDLV 317 (570)
T ss_pred EEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHH-----------HHHcCCeEEEeCHHHHHHHHhcCCccc
Confidence 999999999988654 77899999999883 34444444 999999999999999998865311000
Q ss_pred HhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccc
Q 006354 395 EEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIG 474 (649)
Q Consensus 395 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~ 474 (649)
+....++||.+++||+++++++.+++++.++.+++
T Consensus 318 ---------------------------------------------~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~ 352 (570)
T PRK04319 318 ---------------------------------------------KKYDLSSLRHILSVGEPLNPEVVRWGMKVFGLPIH 352 (570)
T ss_pred ---------------------------------------------ccCCcccceEEEEcccCCCHHHHHHHHHHhCCCeE
Confidence 00012489999999999999999999998999999
Q ss_pred cccCcccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcc--ccccccccCCCccchhh
Q 006354 475 QAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG--FNVTAGYFNNPGKTSEV 551 (649)
Q Consensus 475 ~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g--~~v~~gY~~~~~~t~~~ 551 (649)
+.||+||++..++..... ....+++|+|+|+++++|+| +++.. +++|+.|||+|+| ++++.||+++++.|++.
T Consensus 353 ~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~~~~---~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~ 428 (570)
T PRK04319 353 DNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVD-DQGNE---LPPNRMGNLAIKKGWPSMMRGIWNNPEKYESY 428 (570)
T ss_pred eceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEEC-CCCCC---CCCCCceEEEEcCCCChHHhHhcCCHHHhhhh
Confidence 999999998765543332 33568999999999999999 44443 5789999999987 89999999999999999
Q ss_pred hccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhh
Q 006354 552 YKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQ 631 (649)
Q Consensus 552 f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~ 631 (649)
| .+ |||+|||+|++++||+++++||.||+||+ +|++|+|.|||++|.+||.|. +++|+|.+++..++.+.++.
T Consensus 429 ~---~~--gw~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~i~p~eIE~~l~~~~~V~-~~~v~g~~~~~~g~~~~a~v 501 (570)
T PRK04319 429 F---AG--DWYVSGDSAYMDEDGYFWFQGRVDDVIKT-SGERVGPFEVESKLMEHPAVA-EAGVIGKPDPVRGEIIKAFV 501 (570)
T ss_pred h---cC--CceEeCcEEEECCCeeEEEEecCCCEEEE-CCEEECHHHHHHHHhhCCCee-ecceecccCcCCceEEEEEE
Confidence 8 45 89999999999999999999999999998 599999999999999999999 99999999888776654443
No 36
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.3e-61 Score=535.29 Aligned_cols=462 Identities=23% Similarity=0.291 Sum_probs=373.1
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHC-CCCCCCEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNF-GHNVDTRAAI 160 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~-Gv~~gd~V~i 160 (649)
.|+.++|.++++++|+++|+.+ +++ .+||+||.+++.++|++|.+. |+++||+|+|
T Consensus 10 ~tl~~~l~~~a~~~~~~~a~~~------------~~~-----------~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i 66 (546)
T PRK08314 10 TSLFHNLEVSARRYPDKTAIVF------------YGR-----------AISYRELLEEAERLAGYLQQECGVRKGDRVLL 66 (546)
T ss_pred CCHHHHHHHHHHHcCCCcceee------------cCc-----------eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEE
Confidence 6899999999999999999986 333 699999999999999999999 9999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCC--C
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGS--E 238 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~--~ 238 (649)
+++|+++++++++||+++|++++|++|.++.+++.+++++++++++|++.+....+....... .++.++....... .
T Consensus 67 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 145 (546)
T PRK08314 67 YMQNSPQFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL-RLRHVIVAQYSDYLPA 145 (546)
T ss_pred ECCCChHHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc-CcceEEEecchhhccc
Confidence 999999999999999999999999999999999999999999999999998877776554333 2344443221100 0
Q ss_pred -ccCCCCC---------CCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHH
Q 006354 239 -KDSGVSG---------GISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK 308 (649)
Q Consensus 239 -~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~ 308 (649)
....... ......+..+++...... ........++++|+|+|||||||.||||++||+++++.+....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~ 223 (546)
T PRK08314 146 EPEIAVPAWLRAEPPLQALAPGGVVAWKEALAAGL--APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSV 223 (546)
T ss_pred ccccCcccccccccccccccccccccHHHHhcccC--CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHH
Confidence 0000000 001123345665554322 1223445778999999999999999999999999999998887
Q ss_pred hhCCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHH
Q 006354 309 TLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVR 387 (649)
Q Consensus 309 ~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 387 (649)
..+ .+..+|++++.+|++|.+++.. ++.++..|+++++.+... ...+...++++++|++.++|.++..+.
T Consensus 224 ~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~--------~~~~~~~i~~~~~t~~~~~p~~~~~ll 294 (546)
T PRK08314 224 LWS-NSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWD--------REAAARLIERYRVTHWTNIPTMVVDFL 294 (546)
T ss_pred Hhh-CCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCC--------HHHHHHHHHHhcCceecccHHHHHHHH
Confidence 777 8899999999999999999865 668899999999954321 111223389999999999999998876
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHh
Q 006354 388 EGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINI 467 (649)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~ 467 (649)
..... +....+++|.+++||+++++++.+++.+
T Consensus 295 ~~~~~-----------------------------------------------~~~~~~~l~~~~~gG~~~~~~~~~~~~~ 327 (546)
T PRK08314 295 ASPGL-----------------------------------------------AERDLSSLRYIGGGGAAMPEAVAERLKE 327 (546)
T ss_pred hCCCc-----------------------------------------------cccCchhhheeeeccccCCHHHHHHHHH
Confidence 42100 0001137999999999999999999999
Q ss_pred hcCCccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCcc
Q 006354 468 CMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGK 547 (649)
Q Consensus 468 ~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~ 547 (649)
.++.++++.||+||++.............+++|.|++|++++|+|++++.. ++.|..|||+|+|++++.||+++++.
T Consensus 328 ~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~---~~~g~~Gel~v~g~~~~~gY~~~~~~ 404 (546)
T PRK08314 328 LTGLDYVEGYGLTETMAQTHSNPPDRPKLQCLGIPTFGVDARVIDPETLEE---LPPGEVGEIVVHGPQVFKGYWNRPEA 404 (546)
T ss_pred HcCCcEEecccccccccceecCCCcCCCCCccCcccCCeEEEEEeCCCCcC---CCCCCceEEEEECCchhccccCChhH
Confidence 889999999999999877666554444568999999999999999666654 57889999999999999999999999
Q ss_pred chhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccch
Q 006354 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASST 627 (649)
Q Consensus 548 t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~ 627 (649)
|++.|.. .++.+||+|||+|+++++|++++.||.||+||++ |++|+|.|||++|.++|+|. +++|++.++...++.+
T Consensus 405 t~~~f~~-~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~-G~~v~~~eIE~~i~~~~~v~-~~~v~~~~~~~~~~~~ 481 (546)
T PRK08314 405 TAEAFIE-IDGKRFFRTGDLGRMDEEGYFFITDRLKRMINAS-GFKVWPAEVENLLYKHPAIQ-EACVIATPDPRRGETV 481 (546)
T ss_pred hhhhhhh-cCCCceEecCCEEEEcCCCcEEEEecchhhEEeC-CEEECHHHHHHHHHhCcchh-eEEEEeCCCcccCcee
Confidence 9998852 1334799999999999999999999999999985 99999999999999999999 9999999888766554
Q ss_pred hhhh
Q 006354 628 KIFQ 631 (649)
Q Consensus 628 ~~~~ 631 (649)
.++.
T Consensus 482 ~a~v 485 (546)
T PRK08314 482 KAVV 485 (546)
T ss_pred EEEE
Confidence 4443
No 37
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.7e-61 Score=532.90 Aligned_cols=440 Identities=18% Similarity=0.193 Sum_probs=361.0
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.++|.++++++|+++|+.. +++ .+||+||.++++++|++|+++|+++|++|+++
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~------------~~~-----------~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~ 99 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLID------------ELG-----------TLTWRELDERSDALAAALQALPIGEPRVVGIM 99 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEe------------CCC-----------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 5899999999999999999985 222 59999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++.+....+.......+....++...+..
T Consensus 100 ~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 174 (537)
T PRK13382 100 CRNHRGFVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDED----- 174 (537)
T ss_pred ecCcHHHHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCc-----
Confidence 999999999999999999999999999999999999999999999999887776665443334334444332211
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEE
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l 321 (649)
....++++....... .....+++.++++|||||||.||||+++|++++.........+ .+..+++++
T Consensus 175 ---------~~~~~~~~~~~~~~~---~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l 241 (537)
T PRK13382 175 ---------HDLTVEVLIAAHAGQ---RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT-PWRAEEPTV 241 (537)
T ss_pred ---------ccccHHHHhhccCcC---CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh-CCCCCCeEE
Confidence 012344443322111 1223468899999999999999999999999988888777777 788899999
Q ss_pred EccChHHHHHHHHHHHHHHhCceEEe---CCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhc
Q 006354 322 AYLPLAHVLELAAESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (649)
Q Consensus 322 ~~~pl~h~~~~~~~~~~l~~G~~l~~---~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~ 398 (649)
..+|++|.+++...+.++..|+++++ +++..+.+. ++++++|++.++|+++..+.+......
T Consensus 242 ~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------i~~~~vt~~~~~P~~~~~l~~~~~~~~---- 306 (537)
T PRK13382 242 IVAPMFHAWGFSQLVLAASLACTIVTRRRFDPEATLDL-----------IDRHRATGLAVVPVMFDRIMDLPAEVR---- 306 (537)
T ss_pred EecChHhhhHHHHHHHHHhcCcEEEECCCcCHHHHHHH-----------HHHhCCEEEEehHHHHHHHHcCCchhc----
Confidence 99999999999878889999999988 444445444 999999999999999998865321100
Q ss_pred chhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccC
Q 006354 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (649)
Q Consensus 399 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG 478 (649)
....++++|.+++||+++++++.+.|.+.++.++++.||
T Consensus 307 -----------------------------------------~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG 345 (537)
T PRK13382 307 -----------------------------------------NRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYN 345 (537)
T ss_pred -----------------------------------------ccCCccceeEEEEcCCCCCHHHHHHHHHHcCCcEEeccc
Confidence 001113799999999999999999999988999999999
Q ss_pred cccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCC
Q 006354 479 LTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDER 557 (649)
Q Consensus 479 ~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~ 557 (649)
+||++.+++..... ....+++|+|++|++++|+| ++++. ++.|+.|||+|+|++++.||+ ++.+.. | .+
T Consensus 346 ~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~~~~---~~~g~~GEl~v~g~~~~~gY~--~~~~~~-~---~~ 415 (537)
T PRK13382 346 ATEAGMIATATPADLRAAPDTAGRPAEGTEIRILD-QDFRE---VPTGEVGTIFVRNDTQFDGYT--SGSTKD-F---HD 415 (537)
T ss_pred ccccCcceecChhHhccCCCCccccCcCcEEEEEC-CCCCC---CCCCCeeEEEEEcCCcccCcc--ccchhh-c---cC
Confidence 99998776644322 23458999999999999999 45543 678999999999999999998 555543 4 45
Q ss_pred cccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhhh
Q 006354 558 GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQS 632 (649)
Q Consensus 558 ~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~~ 632 (649)
|||+|||++++++||+++|.||+||+||+ +|++|+|.+||++|.+||+|. +++|++.+++..++...++..
T Consensus 416 --g~~~TGDl~~~~~~g~l~~~GR~dd~ik~-~G~~v~~~eIE~~l~~~~~V~-~~~v~~~~~~~~g~~~~a~vv 486 (537)
T PRK13382 416 --GFMASGDVGYLDENGRLFVVGRDDEMIVS-GGENVYPIEVEKTLATHPDVA-EAAVIGVDDEQYGQRLAAFVV 486 (537)
T ss_pred --CCEeeCceEEEeCCCcEEEeccccceeEE-CCEEECHHHHHHHHHhCCCEe-eEEEEccCccccCCEEEEEEE
Confidence 89999999999999999999999999997 599999999999999999999 999999998877765554443
No 38
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.7e-61 Score=543.05 Aligned_cols=450 Identities=19% Similarity=0.217 Sum_probs=346.5
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 006354 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (649)
Q Consensus 79 ~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V 158 (649)
+...|+.++|+++++++|+++|+.+.+.. ++. .+.++.+||+||.++++++|++|++. +++||+|
T Consensus 18 ~~~~~l~~~l~~~a~~~~~~~a~~~~~~~--------~~~------~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V 82 (631)
T PRK07769 18 PPNTNLVRHVERWAKVRGDKLAYRFLDFS--------TER------DGVARDLTWSQFGARNRAVGARLQQV-TKPGDRV 82 (631)
T ss_pred cccCCHHHHHHHHHHhCCCCeEEEEeccC--------CCC------CCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEE
Confidence 34468999999999999999999864210 000 12345799999999999999999987 8999999
Q ss_pred EEEccCCHHHHHHHHHHHhcCCEEEEe-cCCCC--HHHHHHHHhhcCceEEEECchhHHHHHHhhccCCC--ccEEEEec
Q 006354 159 AILAETCVEWFIAFQGCFRQSITVVTI-YSSLG--EDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKT--IKNVIYFE 233 (649)
Q Consensus 159 ~i~~~~~~~~vva~lA~~~~G~~~vpl-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~--~~~ii~~~ 233 (649)
+|+++|++++++++|||+++|++++|+ ++..+ .+++.+++++++++++|++.+..+.+.+.....+. ...++.++
T Consensus 83 ~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (631)
T PRK07769 83 AILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVD 162 (631)
T ss_pred EEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcc
Confidence 999999999999999999999999999 55554 68999999999999999998876665544332221 12233222
Q ss_pred CCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCC
Q 006354 234 NDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN 313 (649)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~ 313 (649)
.... .. ..........++++++|+|||||||.||||++||+++.+.+......+ .
T Consensus 163 ~~~~-----------------------~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~ 217 (631)
T PRK07769 163 AVPD-----------------------EV-GATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL-E 217 (631)
T ss_pred cccc-----------------------cc-ccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc-C
Confidence 1000 00 000111234678999999999999999999999999999888887777 8
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecc---eEEEechHHHHHHHHHH
Q 006354 314 PGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKP---TLMAAVPAIFDRVREGV 390 (649)
Q Consensus 314 ~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~---t~l~~~P~~l~~l~~~~ 390 (649)
+..+|++++++|++|++++...+.+++.|+++++.++..+... +..+...+.++++ +++..+|.++..+....
T Consensus 218 ~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~ 293 (631)
T PRK07769 218 GQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVRR----PGRWIRELARKPGGTGGTFSAAPNFAFEHAAAR 293 (631)
T ss_pred CCCcceEEEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhC----HHHHHHHHHhhccccCceEeeCCchHHHHHHhh
Confidence 8899999999999999999887888889999988654322111 1112223666665 78999999887665320
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-
Q 006354 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM- 469 (649)
Q Consensus 391 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~- 469 (649)
. ..... ......++||.+++||+++++++.+.|.+.+
T Consensus 294 ~--~~~~~----------------------------------------~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~ 331 (631)
T PRK07769 294 G--LPKDG----------------------------------------EPPLDLSNVKGLLNGSEPVSPASMRKFNEAFA 331 (631)
T ss_pred c--cchhc----------------------------------------ccCcchhheeeEEeccCCCCHHHHHHHHHHHh
Confidence 0 00000 0001124899999999999999999998876
Q ss_pred --C---CccccccCcccccccccccCCCCC---------------------------CCCccCCCcccceEEEEecCCCC
Q 006354 470 --G---APIGQAYGLTETCAGSTFSEWDDP---------------------------SVGRVGPPVPCCYIKLVSWDEGG 517 (649)
Q Consensus 470 --~---~~l~~~YG~TE~~~~~~~~~~~~~---------------------------~~~~vG~p~p~~~v~i~d~~~~~ 517 (649)
| ..+++.||+||++.+++..+.... ..+++|+|+++++++|+|.+++.
T Consensus 332 ~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~ 411 (631)
T PRK07769 332 PYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETAS 411 (631)
T ss_pred hcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCc
Confidence 3 359999999998876654432110 12579999999999999966654
Q ss_pred cccCCCCCCccEEEEccccccccccCCCccchhhhccC-------------CCcccceeeCcEEEEccCCeEEEEecCCC
Q 006354 518 YKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD-------------ERGMCWFYTGDIGQVYPDGCLEIIDRKKD 584 (649)
Q Consensus 518 ~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~-------------~~~~~w~~TGDlg~~~~dG~l~i~GR~dd 584 (649)
. ++.|+.|||+|+|++++.|||++++.|++.|... .++.|||+|||+|+++ ||+|+|+||+||
T Consensus 412 ~---~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d 487 (631)
T PRK07769 412 E---LPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKD 487 (631)
T ss_pred C---CCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEccccc
Confidence 4 6889999999999999999999999999999521 0123899999999995 999999999999
Q ss_pred eEEcCCceeeeCChhhhHhcc-Ccccccc--eEEEecCC
Q 006354 585 IVKLQHGEYISLGKIPSTTTV-LPLLFHH--IRLWRNGP 620 (649)
Q Consensus 585 ~iki~~G~~v~~~eIE~~l~~-~p~V~~~--~~V~g~~~ 620 (649)
+||+ +|++|+|.|||++|.+ ||.|. + ++|++.++
T Consensus 488 ~Ik~-~G~~V~p~eIE~~l~~~~p~v~-~~~~av~~v~d 524 (631)
T PRK07769 488 LVII-DGRNHYPQDLEYTAQEATKALR-TGYVAAFSVPA 524 (631)
T ss_pred EEEE-CCeeeCHHHHHHHHHhcccccc-CCcEEEEEecc
Confidence 9998 5999999999999986 89999 8 99999988
No 39
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.9e-61 Score=541.54 Aligned_cols=473 Identities=16% Similarity=0.176 Sum_probs=361.3
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
+..+++|+++++.+|+++|+++.. +. .+..+.+||+||.++++++|++|+++|+++||+|+++
T Consensus 53 n~~~~~l~~~~~~~p~~~A~~~~~----------~~-------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~ 115 (629)
T PRK10524 53 NLCHNAVDRHLAKRPEQLALIAVS----------TE-------TDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIY 115 (629)
T ss_pred eHHHHHHHHhhccCCCCeEEEEEc----------CC-------CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 446889999999999999998742 11 1223579999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchh---------HHHHHHhhccC-CCccEEEE
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---------LKKLSAVSSSL-KTIKNVIY 231 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~l~~~~~~~-~~~~~ii~ 231 (649)
++|++++++++|||+++|++++|++|.++++++.+++++++++++|+++.. .+.+.++.... +....++.
T Consensus 116 ~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ 195 (629)
T PRK10524 116 MPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLL 195 (629)
T ss_pred CCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999997642 23333333222 23455665
Q ss_pred ecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHH-HHhh
Q 006354 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA-IKTL 310 (649)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~-~~~~ 310 (649)
++...... ... ......+.++.........+.....++++++|+|||||||.||||+++|++++..... ....
T Consensus 196 ~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~ 269 (629)
T PRK10524 196 VDRGLAPM----ARV--AGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTI 269 (629)
T ss_pred EeCCCCCc----Ccc--cCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHh
Confidence 54321100 000 0112345555443222222223346789999999999999999999999998655444 3444
Q ss_pred CCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHH
Q 006354 311 IPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (649)
Q Consensus 311 ~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 389 (649)
+ .+.++|++++.+|++|+.+... ++.+++.|+++++.+....... ...++..++++++|+++++|++++.+.+.
T Consensus 270 ~-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 344 (629)
T PRK10524 270 F-GGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPD----AGIWWRIVEKYKVNRMFSAPTAIRVLKKQ 344 (629)
T ss_pred c-CCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCC----hHHHHHHHHHcCceEEEeCHHHHHHHHhc
Confidence 5 7888999999999999888654 6788999999988432211111 12233449999999999999999887653
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc
Q 006354 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (649)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~ 469 (649)
.... .+....++||.+++||+++++++.+++.+.+
T Consensus 345 ~~~~---------------------------------------------~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~ 379 (629)
T PRK10524 345 DPAL---------------------------------------------LRKHDLSSLRALFLAGEPLDEPTASWISEAL 379 (629)
T ss_pred Cccc---------------------------------------------ccccChhheeEEEEeCCCCCHHHHHHHHHhc
Confidence 1100 0011124899999999999999999999989
Q ss_pred CCccccccCcccccccc-cccCC---CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccc---ccccccc
Q 006354 470 GAPIGQAYGLTETCAGS-TFSEW---DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF---NVTAGYF 542 (649)
Q Consensus 470 ~~~l~~~YG~TE~~~~~-~~~~~---~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~---~v~~gY~ 542 (649)
++++++.||+||++... +.... ...+.+++|+|+||++++|+|++++.. +++|+.|||+|+|| +++.|||
T Consensus 380 ~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~---~~~g~~Gel~i~gp~~~~~~~~~~ 456 (629)
T PRK10524 380 GVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEP---CGPNEKGVLVIEGPLPPGCMQTVW 456 (629)
T ss_pred CCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCC---CCCCCcEEEEEcCCCChhhcCCcc
Confidence 99999999999997433 22211 123458899999999999999536654 78899999999998 6889999
Q ss_pred CCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCC
Q 006354 543 NNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMK 622 (649)
Q Consensus 543 ~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~ 622 (649)
++++.+.+.+.... +.+||+|||+|++|+||+++|+||.||+||++ |++|+|.|||++|.+||+|. +|+|+|.+++.
T Consensus 457 ~~~~~~~~~~~~~~-~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~-G~ri~p~eIE~~l~~~p~V~-e~~vvg~~d~~ 533 (629)
T PRK10524 457 GDDDRFVKTYWSLF-GRQVYSTFDWGIRDADGYYFILGRTDDVINVA-GHRLGTREIEESISSHPAVA-EVAVVGVKDAL 533 (629)
T ss_pred CChHHHHHhhhccC-CCcEEEcCCcEEEcCCCcEEEEEEecCeEEeC-CEEeCHHHHHHHHHhCCCcc-eEEEEccccCC
Confidence 99988777653211 23799999999999999999999999999985 99999999999999999999 99999999988
Q ss_pred cccchhhhhhh
Q 006354 623 LASSTKIFQSC 633 (649)
Q Consensus 623 ~~~~~~~~~~~ 633 (649)
.|+.+.++..+
T Consensus 534 ~g~~~~~~vv~ 544 (629)
T PRK10524 534 KGQVAVAFVVP 544 (629)
T ss_pred CCeEEEEEEEE
Confidence 77666555443
No 40
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=5.9e-61 Score=535.39 Aligned_cols=456 Identities=21% Similarity=0.250 Sum_probs=348.4
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.++|++.++++|+++|+.+.+ +.. ......++.+||+||.++++++|++|.+.|+++||+|+++
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~-----------~~~--~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~ 72 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPG-----------GRG--ADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLM 72 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEecc-----------CCC--CccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 578899999999999999998631 110 0001223469999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch--hHHHHHHhhccCCCccEEEEecCCCCCc
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK--QLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~--~~~~l~~~~~~~~~~~~ii~~~~~~~~~ 239 (649)
++|+++++++++||+++|++++|++|.++.+++.+++++++++++|++.+ ....+... .....+.++.++...
T Consensus 73 ~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~--- 147 (552)
T PRK09274 73 VTPSLEFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGW--GKPSVRRLVTVGGRL--- 147 (552)
T ss_pred eCCcHHHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhcc--Cccchhheecccccc---
Confidence 99999999999999999999999999999999999999999999999752 22222111 112233333332210
Q ss_pred cCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcE
Q 006354 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (649)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~ 319 (649)
......++++...............++++++|+|||||||.||||++||+++.+.+......+ ++.++|+
T Consensus 148 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~ 217 (552)
T PRK09274 148 ---------LWGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY-GIEPGEI 217 (552)
T ss_pred ---------ccCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh-CCCCCce
Confidence 001123444432221122223345678999999999999999999999999999998888887 8899999
Q ss_pred EEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcc
Q 006354 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~ 399 (649)
.++..|++|.++ +..|+++++....... .....+..++..++++++|+++++|+++..+.+.....
T Consensus 218 ~~~~~pl~~~~~-------~~~g~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~------ 283 (552)
T PRK09274 218 DLPTFPLFALFG-------PALGMTSVIPDMDPTR-PATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEAN------ 283 (552)
T ss_pred eeeccCHHHhhh-------hhhCCeEEecCccccc-ccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhc------
Confidence 999999987544 3568887763211000 00011233444599999999999999999987643211
Q ss_pred hhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc--CCcccccc
Q 006354 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM--GAPIGQAY 477 (649)
Q Consensus 400 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~--~~~l~~~Y 477 (649)
....++||.+++||+++++++.+.+++.+ |+++++.|
T Consensus 284 -----------------------------------------~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~Y 322 (552)
T PRK09274 284 -----------------------------------------GIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPY 322 (552)
T ss_pred -----------------------------------------CCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccc
Confidence 01124899999999999999999999988 47999999
Q ss_pred CcccccccccccCCC----------CCCCCccCCCcccceEEEEecCCCC-----cccCCCCCCccEEEEcccccccccc
Q 006354 478 GLTETCAGSTFSEWD----------DPSVGRVGPPVPCCYIKLVSWDEGG-----YKTSDKPMPRGEIVVGGFNVTAGYF 542 (649)
Q Consensus 478 G~TE~~~~~~~~~~~----------~~~~~~vG~p~p~~~v~i~d~~~~~-----~~~~~~~g~~GEl~v~g~~v~~gY~ 542 (649)
|+||++.+++..... .....++|+|+|+++++|+|+++.. ....++.|+.|||+|+|++++.|||
T Consensus 323 G~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~ 402 (552)
T PRK09274 323 GATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYY 402 (552)
T ss_pred cccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEEEecCccccccc
Confidence 999998765543221 1122479999999999999953221 1123788999999999999999999
Q ss_pred CCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCC
Q 006354 543 NNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMK 622 (649)
Q Consensus 543 ~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~ 622 (649)
++|+.|...|..+.+|..||+|||+|++|+||+|+++||.||+||+. |++|+|.|||++|.+||+|. +|+|++.+++.
T Consensus 403 ~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~-G~~v~p~eIE~~l~~~p~V~-~~~v~~~~~~~ 480 (552)
T PRK09274 403 NRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETA-GGTLYTIPCERIFNTHPGVK-RSALVGVGVPG 480 (552)
T ss_pred CChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEEC-CEEECcHHHHHHHHhCcccc-eeEEEEeCCCC
Confidence 99999998875334422399999999999999999999999999985 99999999999999999999 99999988764
No 41
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-60 Score=532.54 Aligned_cols=459 Identities=24% Similarity=0.365 Sum_probs=363.2
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHH-CCCCCCCEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAI 160 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~-~Gv~~gd~V~i 160 (649)
.|+.++|+++++++|+++|++. +++ .+||+||.++++++|++|.+ .|+++||+|+|
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~------------~~~-----------~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai 80 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSN------------LGK-----------TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAV 80 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 5899999999999999999985 343 69999999999999999997 59999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCc-
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK- 239 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~- 239 (649)
+++|++++++++|||+++|++++|++|.++.+++.+++++++++++|++.+....+.+..... .++.++..+......
T Consensus 81 ~~~n~~~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 159 (562)
T PRK05677 81 QLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKT-GVKHVIVTEVADMLPP 159 (562)
T ss_pred ECCCCHHHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhcc-CcceeEEecccccccc
Confidence 999999999999999999999999999999999999999999999999887766555544322 344444332111000
Q ss_pred --cCCC-------CC---CCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHH
Q 006354 240 --DSGV-------SG---GISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAI 307 (649)
Q Consensus 240 --~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~ 307 (649)
...+ .. .........+.+................++++++|+|||||||.||||+++|++++..+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~ 239 (562)
T PRK05677 160 LKRLLINAVVKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQC 239 (562)
T ss_pred hhhhhcccchhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHH
Confidence 0000 00 00001123445544433322222344577999999999999999999999999998877665
Q ss_pred HhhC-CCCC-CCcEEEEccChHHHHHHHH-HHHHHHhCceEEe-CCc---ccccccchhhccCccccceeecceEEEech
Q 006354 308 KTLI-PNPG-RSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGY-GST---LTMTDTSSKIKKGTKGDVSVLKPTLMAAVP 380 (649)
Q Consensus 308 ~~~~-~~~~-~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~-~~~---~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P 380 (649)
...+ ..+. ..+++++.+|++|.+++.. ++.++..|++.++ .++ ..+++. ++++++|+++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~p 308 (562)
T PRK05677 240 RALMGSNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKE-----------LGKWKFSGFVGLN 308 (562)
T ss_pred HHHhccCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHH-----------HHHcCceEEecHH
Confidence 5543 1233 3468899999999999865 5667788887665 222 223333 9999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHH
Q 006354 381 AIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSAD 460 (649)
Q Consensus 381 ~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~ 460 (649)
.++..+...... +....+++|.+++||++++++
T Consensus 309 ~~~~~l~~~~~~-----------------------------------------------~~~~~~~lr~v~~gG~~~~~~ 341 (562)
T PRK05677 309 TLFVALCNNEAF-----------------------------------------------RKLDFSALKLTLSGGMALQLA 341 (562)
T ss_pred HHHHHHHhCccc-----------------------------------------------ccCChhhceEEEEcCccCCHH
Confidence 999887652100 000113799999999999999
Q ss_pred HHHHHHhhcCCccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcccccccc
Q 006354 461 SQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAG 540 (649)
Q Consensus 461 ~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~g 540 (649)
+.+.|.+.+++++++.||+||++.+++........++++|+|+|+++++|+| +++.. ++.|+.|||+|+|+.++.|
T Consensus 342 ~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~~---~~~g~~Gel~v~g~~~~~g 417 (562)
T PRK05677 342 TAERWKEVTGCAICEGYGMTETSPVVSVNPSQAIQVGTIGIPVPSTLCKVID-DDGNE---LPLGEVGELCVKGPQVMKG 417 (562)
T ss_pred HHHHHHHHcCCCeeccCCccccCcceeecCccCCCCCccCccCCCCEEEEEC-CCCCC---CCCCCCeEEEEecCccchh
Confidence 9999999889999999999999887766655555668999999999999999 45543 7899999999999999999
Q ss_pred ccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCC
Q 006354 541 YFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGP 620 (649)
Q Consensus 541 Y~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~ 620 (649)
|+++|+.|++.|. .+ |||+|||+|++++||++++.||.+|+||++ |++|+|.+||++|.+||+|. +++|+|.++
T Consensus 418 Y~~~~~~t~~~~~--~~--g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~-G~~i~p~eiE~~l~~~~~v~-~~~v~g~~~ 491 (562)
T PRK05677 418 YWQRPEATDEILD--SD--GWLKTGDIALIQEDGYMRIVDRKKDMILVS-GFNVYPNELEDVLAALPGVL-QCAAIGVPD 491 (562)
T ss_pred hcCCchhhhhccC--CC--CcccccceEEECCCCcEEEEecCcCeEEeC-CEEECHHHHHHHHHhCCCcc-EEEEEeccC
Confidence 9999999999986 56 899999999999999999999999999985 99999999999999999999 999999998
Q ss_pred CCcccchhhhhh
Q 006354 621 MKLASSTKIFQS 632 (649)
Q Consensus 621 ~~~~~~~~~~~~ 632 (649)
...++.+.++..
T Consensus 492 ~~~g~~~~~~v~ 503 (562)
T PRK05677 492 EKSGEAIKVFVV 503 (562)
T ss_pred ccCCceEEEEEE
Confidence 877766655443
No 42
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=4.6e-62 Score=641.35 Aligned_cols=489 Identities=20% Similarity=0.249 Sum_probs=400.0
Q ss_pred CcccccccccCCCccceehheeeecceeEeeehhccccccccccCCCCCCCCCCccccccCCCCcccccCCCCCCCHHHH
Q 006354 8 SFDSELLTEKGSGIYGIVGAAIVALLIPVLLSMMVARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAAL 87 (649)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~ 87 (649)
.|++++|+...+..|..++..++..+ +++ |... ++++++++..+...+..++..+. .+...+++++
T Consensus 1071 ~y~~~~~~~~~i~~l~~~~~~~l~~~----~~~--p~~~---~~~l~l~~~~~~~~l~~~~~~~~-----~~~~~~l~~~ 1136 (4334)
T PRK05691 1071 DYAAELFDAATIERLAEHFLALLEQV----CED--PQRA---LGDVQLLDAAERAQLAQWGQAPC-----APAQAWLPEL 1136 (4334)
T ss_pred EEchhhCCHHHHHHHHHHHHHHHHHH----HhC--cccc---hhhhcCCCHHHHHHHHhccCCCC-----CCccCCHHHH
Confidence 68999999999999999888887743 234 6776 88899998888877665554111 1234689999
Q ss_pred HHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH
Q 006354 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE 167 (649)
Q Consensus 88 ~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~ 167 (649)
|+++++++|+++|+.+ ++. .+||+||.++++++|++|+++|+++|++|+|+++++++
T Consensus 1137 ~~~~a~~~p~~~Al~~------------~~~-----------~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~ 1193 (4334)
T PRK05691 1137 LNEQARQTPERIALVW------------DGG-----------SLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQ 1193 (4334)
T ss_pred HHHHHHhCCCCeEEEE------------CCc-----------eEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH
Confidence 9999999999999986 332 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCC
Q 006354 168 WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGI 247 (649)
Q Consensus 168 ~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~ 247 (649)
+++++|||+++|+++||+||.+|.+++.+++++++++++|++......+... ... ..+.++..
T Consensus 1194 ~iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~----~~~-~~~~~~~~------------ 1256 (4334)
T PRK05691 1194 LLVGLLAILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA----EGV-SAIALDSL------------ 1256 (4334)
T ss_pred HHHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc----cCc-eEEeeccc------------
Confidence 9999999999999999999999999999999999999999998765443221 111 11111110
Q ss_pred CCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChH
Q 006354 248 SNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLA 327 (649)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~ 327 (649)
.........+.....++++|||+|||||||.||||+++|+++.+.+.+....+ .++++|++++++|++
T Consensus 1257 -----------~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~ 1324 (4334)
T PRK05691 1257 -----------HLDSWPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATY-ALDDSDVLMQKAPIS 1324 (4334)
T ss_pred -----------cccccCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhc-CCCCCCEEEEeCCcc
Confidence 00000011112334678999999999999999999999999999999988888 899999999999999
Q ss_pred HHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 006354 328 HVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNI 407 (649)
Q Consensus 328 h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~ 407 (649)
|+.+++.++.+|..|+++++.++....+. ..+...++++++|++.++|++++.+......
T Consensus 1325 fd~s~~~~~~~L~~G~~l~i~~~~~~~~~-----~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~--------------- 1384 (4334)
T PRK05691 1325 FDVSVWECFWPLITGCRLVLAGPGEHRDP-----QRIAELVQQYGVTTLHFVPPLLQLFIDEPLA--------------- 1384 (4334)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCccccCCH-----HHHHHHHHHcCCeEEECcHHHHHHHHhCccc---------------
Confidence 99999999999999999999654332221 2233349999999999999999988652110
Q ss_pred HHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccccCcccccccc
Q 006354 408 GYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTETCAGS 486 (649)
Q Consensus 408 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~ 486 (649)
...++||.+++|||++++++.+.|.+.+ +++++|.||+||++..+
T Consensus 1385 ----------------------------------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 1430 (4334)
T PRK05691 1385 ----------------------------------AACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINV 1430 (4334)
T ss_pred ----------------------------------ccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeee
Confidence 0114899999999999999999888876 78999999999998777
Q ss_pred cccCC--CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC---Ccccc
Q 006354 487 TFSEW--DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE---RGMCW 561 (649)
Q Consensus 487 ~~~~~--~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~---~~~~w 561 (649)
+.... ......++|+|++|++++|+| ++++. ++.|..|||+|+|+++++||+|+|+.|+++|..++ ++.+|
T Consensus 1431 ~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~---vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~ 1506 (4334)
T PRK05691 1431 THWQCQAEDGERSPIGRPLGNVLCRVLD-AELNL---LPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARL 1506 (4334)
T ss_pred eeeecccccCCCCcccceeCCCEEEEEC-CCCCC---CCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceE
Confidence 64332 233457899999999999999 55543 78999999999999999999999999999997543 24579
Q ss_pred eeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCC
Q 006354 562 FYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMK 622 (649)
Q Consensus 562 ~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~ 622 (649)
|+|||+|++++||.++|+||+|++||++ |+||+|+|||++|.+||+|. +|+|++..+..
T Consensus 1507 yrTGDl~~~~~dG~l~~~GR~d~qiki~-G~rie~~eIE~~l~~~~~V~-~a~v~~~~~~~ 1565 (4334)
T PRK05691 1507 YRTGDRARWNADGALEYLGRLDQQVKLR-GFRVEPEEIQARLLAQPGVA-QAAVLVREGAA 1565 (4334)
T ss_pred EEccceEEECCCCCEEEecccCcEEEEC-CEEcCHHHHHHHHHhCCCcc-eEEEEEeeCCC
Confidence 9999999999999999999999999995 99999999999999999999 99999766543
No 43
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=6.8e-60 Score=524.89 Aligned_cols=449 Identities=23% Similarity=0.299 Sum_probs=364.5
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCC
Q 006354 77 PWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDT 156 (649)
Q Consensus 77 ~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd 156 (649)
.++...++.+++.++++++|+++|+...+ +++ ++||+||.++++++|++|++.|+++||
T Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~a~~~~~----------~~~-----------~~ty~el~~~~~~la~~L~~~g~~~gd 76 (537)
T PLN02246 18 YIPNHLPLHDYCFERLSEFSDRPCLIDGA----------TGR-----------VYTYADVELLSRRVAAGLHKLGIRQGD 76 (537)
T ss_pred CCCCCCcHHHHHHHHHHhCCCCeEEEecC----------CCc-----------eeeHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 44555789999999999999999997531 233 699999999999999999999999999
Q ss_pred EEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCC
Q 006354 157 RAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDG 236 (649)
Q Consensus 157 ~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~ 236 (649)
+|+++++|+++++++++||+++|++++|++|.++.+++..+++.++++++|++......+...... +.+ .++.++...
T Consensus 77 ~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~~~-~~i~~~~~~ 154 (537)
T PLN02246 77 VVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED-DGV-TVVTIDDPP 154 (537)
T ss_pred EEEEECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc-CCc-eEEEeCCCC
Confidence 999999999999999999999999999999999999999999999999999998887776655432 122 344443321
Q ss_pred CCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHh----hCC
Q 006354 237 SEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT----LIP 312 (649)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~----~~~ 312 (649)
. ....+.++..... ...+.....++++++++|||||||.||||+++|+++++.+..... .+
T Consensus 155 ~-------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~- 219 (537)
T PLN02246 155 E-------------GCLHFSELTQADE-NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNL- 219 (537)
T ss_pred C-------------CceeHHHHhcCCC-CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhcccccc-
Confidence 1 1234444433221 112233456889999999999999999999999999988766543 34
Q ss_pred CCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHH
Q 006354 313 NPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (649)
Q Consensus 313 ~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 391 (649)
.+.++|++++.+|++|.+++.. ++.++..|+++++.+.... ..++..++++++|++.++|.++..+.+...
T Consensus 220 ~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 291 (537)
T PLN02246 220 YFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEI--------GALLELIQRHKVTIAPFVPPIVLAIAKSPV 291 (537)
T ss_pred CCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCH--------HHHHHHHHHhCceEEEcchHHHHHHhcCcc
Confidence 7889999999999999999866 5678999999999443211 112333999999999999999988765211
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-C
Q 006354 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-G 470 (649)
Q Consensus 392 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~ 470 (649)
. .....+++|.+++||+++++++.+++++.+ +
T Consensus 292 ~-----------------------------------------------~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~ 324 (537)
T PLN02246 292 V-----------------------------------------------EKYDLSSIRMVLSGAAPLGKELEDAFRAKLPN 324 (537)
T ss_pred c-----------------------------------------------cccCccceeEEEEecCcCCHHHHHHHHHHcCC
Confidence 0 000114799999999999999999999987 7
Q ss_pred CccccccCcccccccccccCC-----CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCC
Q 006354 471 APIGQAYGLTETCAGSTFSEW-----DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNP 545 (649)
Q Consensus 471 ~~l~~~YG~TE~~~~~~~~~~-----~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~ 545 (649)
+.+++.||+||++.+++.... .....+++|+|+++++++|+|++++.. ++.|+.|||+|+|++++.||++++
T Consensus 325 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~---~~~g~~Gel~v~g~~~~~GY~~~~ 401 (537)
T PLN02246 325 AVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGAS---LPRNQPGEICIRGPQIMKGYLNDP 401 (537)
T ss_pred CeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCc---CCCCCceEEEEECCchhccccCCc
Confidence 889999999999876544321 123457899999999999999655544 678999999999999999999999
Q ss_pred ccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCccc
Q 006354 546 GKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLAS 625 (649)
Q Consensus 546 ~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~ 625 (649)
+.|++.|. .+ +||+|||+|++++||++++.||.||+||++ |++|+|.+||++|.+||+|. +|+|++..+...++
T Consensus 402 ~~~~~~~~--~~--~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~-G~~i~~~eIE~~l~~~~~v~-~~~v~~~~~~~~~~ 475 (537)
T PLN02246 402 EATANTID--KD--GWLHTGDIGYIDDDDELFIVDRLKELIKYK-GFQVAPAELEALLISHPSIA-DAAVVPMKDEVAGE 475 (537)
T ss_pred hhhhhccc--CC--CCeeecceEEEeCCCeEEEEecccceEEEC-CEEECcHHHHHHHHhCCCee-EEEEEcccCccCCc
Confidence 99999885 45 899999999999999999999999999985 99999999999999999999 99999988877664
Q ss_pred ch
Q 006354 626 ST 627 (649)
Q Consensus 626 ~~ 627 (649)
.+
T Consensus 476 ~~ 477 (537)
T PLN02246 476 VP 477 (537)
T ss_pred ee
Confidence 43
No 44
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.4e-61 Score=548.33 Aligned_cols=423 Identities=18% Similarity=0.212 Sum_probs=342.3
Q ss_pred CHHHHHHHHHHh--CCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 83 TMAALFEQSCKS--HPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 83 tl~~~~~~~a~~--~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
++.++|.+++++ +||++|+.. +. .+||+||.++++++|++|++.|+++||+|+|
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~-------------~~-----------~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i 60 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYA-------------AD-----------VVTHGQIHDGAARLGEVLRNRGLSSGDRVLL 60 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEe-------------cC-----------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 789999999886 799999974 11 4899999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|+++++++++||+++|++++|++|.++.+++.+++++++++++|++......+... . ++
T Consensus 61 ~~~~~~~~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-------~-~~---------- 122 (705)
T PRK06060 61 CLPDSPDLVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS-------R-VA---------- 122 (705)
T ss_pred ECCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc-------c-cc----------
Confidence 99999999999999999999999999999999999999999999999987654433210 0 00
Q ss_pred CCCCCCCCCceEeehHHHHhcC-CCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHH-hhCCCCCCCc
Q 006354 241 SGVSGGISNWTVSSFSEVEKLG-KRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK-TLIPNPGRSD 318 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~-~~~~~~~~~d 318 (649)
...++.... ...+.......++++|||+|||||||.||||+++|+++++.+.+.. ..+ .+..+|
T Consensus 123 -------------~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d 188 (705)
T PRK06060 123 -------------EAAELMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKAL-RLTPED 188 (705)
T ss_pred -------------hhhhhhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhh-CCCCcc
Confidence 000111000 0011111234578999999999999999999999999998887664 456 788899
Q ss_pred EEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhh
Q 006354 319 VYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEK 397 (649)
Q Consensus 319 ~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~ 397 (649)
++++..|++|.+++.. ++.++..|+++++.+...- ...+...++++++|+++++|+++..+.+....
T Consensus 189 ~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~-------~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~----- 256 (705)
T PRK06060 189 TGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVT-------PEAAAILSARFGPSVLYGVPNFFARVIDSCSP----- 256 (705)
T ss_pred eeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCC-------HHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc-----
Confidence 9999999999988754 6778999999998432110 01112238899999999999999888753210
Q ss_pred cchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccc
Q 006354 398 GGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQA 476 (649)
Q Consensus 398 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~ 476 (649)
...++||.+++||+++++++.+.+.+.+ +++++|.
T Consensus 257 --------------------------------------------~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~ 292 (705)
T PRK06060 257 --------------------------------------------DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDG 292 (705)
T ss_pred --------------------------------------------ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEee
Confidence 0013799999999999999999998887 5899999
Q ss_pred cCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC
Q 006354 477 YGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE 556 (649)
Q Consensus 477 YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~ 556 (649)
||+||++..+..........+++|+|+++++++|+| +++.. +++|+.|||||+|++++.||+|+|+.+.. .
T Consensus 293 YG~tE~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d-~~g~~---~~~g~~GEl~i~g~~v~~GY~~~~~~~~~-----~ 363 (705)
T PRK06060 293 IGSTEVGQTFVSNRVDEWRLGTLGRVLPPYEIRVVA-PDGTT---AGPGVEGDLWVRGPAIAKGYWNRPDSPVA-----N 363 (705)
T ss_pred eeccccCceEEeccCCCCCcCcccccCCCcEEEEEC-CCCCC---CCCCCceEEEEccchhhhhhhCCCccccc-----C
Confidence 999999866554444444568899999999999999 44443 78899999999999999999999986532 3
Q ss_pred CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhh
Q 006354 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIF 630 (649)
Q Consensus 557 ~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~ 630 (649)
+ +||+|||+|++++||+++++||+||+||++ |++|+|.|||++|.+||.|. +|+|++..+...++.+.++
T Consensus 364 ~--~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~-G~~v~~~eIE~~l~~~~~V~-~a~vv~~~~~~~~~~~~a~ 433 (705)
T PRK06060 364 E--GWLDTRDRVCIDSDGWVTYRCRADDTEVIG-GVNVDPREVERLIIEDEAVA-EAAVVAVRESTGASTLQAF 433 (705)
T ss_pred C--CcEECCeeEEECCCceEEEecccCceEEEC-CEEECHHHHHHHHHhCCCee-EEEEEeecCccCCeeEEEE
Confidence 4 899999999999999999999999999985 99999999999999999999 9999999887665544443
No 45
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-60 Score=529.55 Aligned_cols=443 Identities=19% Similarity=0.241 Sum_probs=346.0
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..++.+.|.++|+++|+++|+... ++. ..+||+||.++++++|++|++.|+++||+|+|
T Consensus 13 ~~~~~~~l~~~a~~~p~~~a~~~~-----------~~~----------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i 71 (540)
T PRK05857 13 PSTVLDRVFEQARQQPEAIALRRC-----------DGT----------SALRYRELVAEVGGLAADLRAQSVSRGSRVLV 71 (540)
T ss_pred CcchHHHHHHHHhhCCCcEEEeec-----------CCC----------ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEE
Confidence 358999999999999999999753 332 35999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|++++++++|||+++|++++|+++.++.+++.++++.++++.+|++.........+......+. ++.++......
T Consensus 72 ~~~~~~e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~- 149 (540)
T PRK05857 72 ISDNGPETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIP-VIAVDIAAVTR- 149 (540)
T ss_pred EcCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccc-eeEeecccccc-
Confidence 9999999999999999999999999999999999999999999999998865432222211112222 22222111000
Q ss_pred CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHh----hCCCCCC
Q 006354 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT----LIPNPGR 316 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~ 316 (649)
....... ...........++++++++|||||||.||||++||+++.+....... .+ .+..
T Consensus 150 ---------~~~~~~~------~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~-~~~~ 213 (540)
T PRK05857 150 ---------ESEHSLD------AASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWV-TWVV 213 (540)
T ss_pred ---------ccccccc------ccccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhcccccc-cccc
Confidence 0000000 00011123346789999999999999999999999999877654432 12 4566
Q ss_pred CcEEEEccChHHHHHHHHHHHHHHhCceEEe--CCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHH
Q 006354 317 SDVYLAYLPLAHVLELAAESIMLCAGCAIGY--GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKV 394 (649)
Q Consensus 317 ~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~--~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 394 (649)
++++++.+|++|..+++..+.+++.|+++++ .++..+.+. ++++++|+++++|.++..+.......
T Consensus 214 ~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~~~~~~~~~~~~-----------i~~~~it~~~~~P~~~~~l~~~~~~~- 281 (540)
T PRK05857 214 GETTYSPLPATHIGGLWWILTCLMHGGLCVTGGENTTSLLEI-----------LTTNAVATTCLVPTLLSKLVSELKSA- 281 (540)
T ss_pred CceeeecCCccccchHHHHHHHhhcceeEEecCCChhHHHHH-----------HHhcCcceEEeChHHHHHHHhccccC-
Confidence 7899999999999999888889999999877 333444444 99999999999999999887532110
Q ss_pred HhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccc
Q 006354 395 EEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIG 474 (649)
Q Consensus 395 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~ 474 (649)
....+++|.+++||++++....+++. .++++++
T Consensus 282 ----------------------------------------------~~~~~~lr~~~~gG~~~~~~~~~~~~-~~g~~i~ 314 (540)
T PRK05857 282 ----------------------------------------------NATVPSLRLVGYGGSRAIAADVRFIE-ATGVRTA 314 (540)
T ss_pred ----------------------------------------------CCcCccceEEEEcCccCCchhHHHHH-HhCCeee
Confidence 00124899999999999988776554 5699999
Q ss_pred cccCcccccccccccCCC-----CCCCCccCCCcccceEEEEecCCCCccc--CCCCCCccEEEEccccccccccCCCcc
Q 006354 475 QAYGLTETCAGSTFSEWD-----DPSVGRVGPPVPCCYIKLVSWDEGGYKT--SDKPMPRGEIVVGGFNVTAGYFNNPGK 547 (649)
Q Consensus 475 ~~YG~TE~~~~~~~~~~~-----~~~~~~vG~p~p~~~v~i~d~~~~~~~~--~~~~g~~GEl~v~g~~v~~gY~~~~~~ 547 (649)
+.||+||++......+.. ..+.+++|+|++|++++|+|.+...... .++.|+.|||+|+|++++.||+++++.
T Consensus 315 ~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~ 394 (540)
T PRK05857 315 QVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPER 394 (540)
T ss_pred cccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccc
Confidence 999999987544332221 1235789999999999999843322211 134578999999999999999999999
Q ss_pred chhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccch
Q 006354 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASST 627 (649)
Q Consensus 548 t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~ 627 (649)
|++.| .+ |||+|||+|++|+||++++.||.||+||+ +|++|+|.|||++|..||+|. +|+|++.++...++.+
T Consensus 395 t~~~~---~~--g~~~TGDlg~~d~~g~l~~~GR~~~~ik~-~G~~v~p~eIE~~l~~~~~V~-~~~v~~~~~~~~~~~~ 467 (540)
T PRK05857 395 TAEVL---ID--GWVNTGDLLERREDGFFYIKGRSSEMIIC-GGVNIAPDEVDRIAEGVSGVR-EAACYEIPDEEFGALV 467 (540)
T ss_pred hhhhc---CC--CceeccceEEEcCCceEEEeccccccEec-CCEEECHHHHHHHHHhCCCee-EEEEEecCccccccce
Confidence 99998 56 89999999999999999999999999997 599999999999999999999 9999999987766544
Q ss_pred h
Q 006354 628 K 628 (649)
Q Consensus 628 ~ 628 (649)
.
T Consensus 468 ~ 468 (540)
T PRK05857 468 G 468 (540)
T ss_pred E
Confidence 3
No 46
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.8e-60 Score=534.09 Aligned_cols=459 Identities=19% Similarity=0.213 Sum_probs=346.5
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCC
Q 006354 77 PWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDT 156 (649)
Q Consensus 77 ~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd 156 (649)
+++...|+.++|+++++++|+++|+.+.+.. ++. .+..+.+||+||.++++++|++|++. +++||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--------~~~------~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd 93 (612)
T PRK12476 29 ALPPGTTLISLIERNIANVGDTVAYRYLDHS--------HSA------AGCAVELTWTQLGVRLRAVGARLQQV-AGPGD 93 (612)
T ss_pred cCCccCcHHHHHHHHHHhCCCceEEEEEccC--------CCC------CCcceEEeHHHHHHHHHHHHHHHHHh-cCCCC
Confidence 3344578999999999999999999874210 100 12234799999999999999999987 99999
Q ss_pred EEEEEccCCHHHHHHHHHHHhcCCEEEEe-cCCCC--HHHHHHHHhhcCceEEEECchhHHHHHHhhccCCC--ccEEEE
Q 006354 157 RAAILAETCVEWFIAFQGCFRQSITVVTI-YSSLG--EDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKT--IKNVIY 231 (649)
Q Consensus 157 ~V~i~~~~~~~~vva~lA~~~~G~~~vpl-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~--~~~ii~ 231 (649)
+|+++++|+++|+++++||+++|++++|+ ++.++ ++++.+++++++++++|++++..+.+.......+. ...++.
T Consensus 94 ~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~ 173 (612)
T PRK12476 94 RVAILAPQGIDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIA 173 (612)
T ss_pred EEEEECCCChhHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEE
Confidence 99999999999999999999999999999 57776 89999999999999999998877666554333322 123443
Q ss_pred ecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC
Q 006354 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI 311 (649)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~ 311 (649)
+++... .. ..........++|+++|+|||||||.||||++||+++++.+......+
T Consensus 174 ~~~~~~-----------------------~~-~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~ 229 (612)
T PRK12476 174 IDAIPD-----------------------SA-GESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSI 229 (612)
T ss_pred eccccc-----------------------cc-cccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHh
Confidence 322100 00 001111234678999999999999999999999999988877766666
Q ss_pred CC-CCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccc--eeecceEEEechHHHHHHHH
Q 006354 312 PN-PGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDV--SVLKPTLMAAVPAIFDRVRE 388 (649)
Q Consensus 312 ~~-~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i--~~~~~t~l~~~P~~l~~l~~ 388 (649)
. +.+++++++++|++|.+++...+.+++.|+++++..+..+... +..++..+ .++++|+++.+|.++..+..
T Consensus 230 -~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~----p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~ 304 (612)
T PRK12476 230 -DLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRR----PQRWIKALSEGSRTGRVVTAAPNFAYEWAA 304 (612)
T ss_pred -ccCCCCceEEEeCCcccccchHHHHHHHhcCCeEEEECHHHHHHH----HHHHHHHHhhhccCCeEEEeCCcHHHHHHH
Confidence 6 7888999999999999999876766666777666433211111 11222226 35889999999999887765
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhh
Q 006354 389 GVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINIC 468 (649)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~ 468 (649)
........ .....+++| +++||+++++++.+.|.+.
T Consensus 305 ~~~~~~~~-------------------------------------------~~~~l~~lr-~~~gg~~~~~~~~~~~~~~ 340 (612)
T PRK12476 305 QRGLPAEG-------------------------------------------DDIDLSNVV-LIIGSEPVSIDAVTTFNKA 340 (612)
T ss_pred HhcChhhh-------------------------------------------cCcchhHhe-EEecccCCCHHHHHHHHHH
Confidence 31000000 000114789 9999999999999999887
Q ss_pred c---CC---ccccccCcccccccccccCCCC---------------------------CCCCccCCCcccceEEEEecCC
Q 006354 469 M---GA---PIGQAYGLTETCAGSTFSEWDD---------------------------PSVGRVGPPVPCCYIKLVSWDE 515 (649)
Q Consensus 469 ~---~~---~l~~~YG~TE~~~~~~~~~~~~---------------------------~~~~~vG~p~p~~~v~i~d~~~ 515 (649)
+ |+ .+++.||+||++..++...... ...+++|+|+||++++|+|.++
T Consensus 341 ~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~ 420 (612)
T PRK12476 341 FAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDT 420 (612)
T ss_pred HHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCC
Confidence 6 43 4899999999876544322110 0125899999999999999544
Q ss_pred CCcccCCCCCCccEEEEccccccccccCCCccchhhhccC-----CC---------cccceeeCcEEEEccCCeEEEEec
Q 006354 516 GGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD-----ER---------GMCWFYTGDIGQVYPDGCLEIIDR 581 (649)
Q Consensus 516 ~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~-----~~---------~~~w~~TGDlg~~~~dG~l~i~GR 581 (649)
++. +++|+.|||+|+|++++.|||++|+.|++.|... .+ +.+||+|||+|+++ ||+|+|+||
T Consensus 421 g~~---~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~l~i~GR 496 (612)
T PRK12476 421 GAE---LPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGELYITGR 496 (612)
T ss_pred CcC---CCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCEEEEEec
Confidence 554 7899999999999999999999999999998520 01 23699999999985 999999999
Q ss_pred CCCeEEcCCceeeeCChhhhHhc-cCcccccc--eEEEecCCCCcccchhhh
Q 006354 582 KKDIVKLQHGEYISLGKIPSTTT-VLPLLFHH--IRLWRNGPMKLASSTKIF 630 (649)
Q Consensus 582 ~dd~iki~~G~~v~~~eIE~~l~-~~p~V~~~--~~V~g~~~~~~~~~~~~~ 630 (649)
+||+||+ +|++|+|.|||++|. .||.|. + ++|++.+++. ++.+.++
T Consensus 497 ~~d~I~~-~G~~I~p~eIE~~l~~~~p~V~-~~~v~v~~~~~~~-~~~~~~~ 545 (612)
T PRK12476 497 IADLIVI-DGRNHYPQDIEATVAEASPMVR-RGYVTAFTVPAED-NERLVIV 545 (612)
T ss_pred cCcEEEE-CCcccCHHHHHHHHHHhccccc-CCcEEEEEecCCC-cceEEEE
Confidence 9999998 599999999999998 489999 9 7788887766 4444443
No 47
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=8.7e-60 Score=533.26 Aligned_cols=459 Identities=14% Similarity=0.110 Sum_probs=348.0
Q ss_pred hCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHH
Q 006354 94 SHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQ 173 (649)
Q Consensus 94 ~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~l 173 (649)
+.++++|+++.. . .+..+.+||+||.++++++|++|+++|+++||+|+|+++|++++++++|
T Consensus 96 ~~~~~~a~~~~~-----------~-------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~l 157 (652)
T TIGR01217 96 AAGTEPALLYVD-----------E-------THEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAML 157 (652)
T ss_pred cCCCCeEEEEEC-----------C-------CCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 468899998742 1 1233579999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchh---------HHHHHHhhccCCCccEEEEecCCCCCccCCCC
Q 006354 174 GCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---------LKKLSAVSSSLKTIKNVIYFENDGSEKDSGVS 244 (649)
Q Consensus 174 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~ 244 (649)
||+++|++++|+++.++++++.+++++++++++|+++.. .+.+.++...++.++.++.+......... ..
T Consensus 158 A~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~ 236 (652)
T TIGR01217 158 ATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETE-AP 236 (652)
T ss_pred HHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcccc-cc
Confidence 999999999999999999999999999999999998653 35555555566677777776532211000 00
Q ss_pred CCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHH-HHHHHHhhCCCCCCCcEEEEc
Q 006354 245 GGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVA-TAAAIKTLIPNPGRSDVYLAY 323 (649)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~-~~~~~~~~~~~~~~~d~~l~~ 323 (649)
. ......++++...............++++++|+|||||||.||||+++|++++. ........+ .+.++|+++++
T Consensus 237 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~ 312 (652)
T TIGR01217 237 K---IDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC-DLGPGDRLFYY 312 (652)
T ss_pred c---ccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc-CCCCCcEEEEe
Confidence 0 011245666654322212222345678999999999999999999999999754 344444455 88899999999
Q ss_pred cChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHH
Q 006354 324 LPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKN 403 (649)
Q Consensus 324 ~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~ 403 (649)
+|++|++. ..++.+|+.|+++++.+....... ...++..++++++|++..+|.+++.+.......
T Consensus 313 ~~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~----~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~---------- 377 (652)
T TIGR01217 313 TTTGWMMW-NWLVSGLATGATLVLYDGSPGFPA----TNVLWDIAERTGATLFGTSAKYVMACRKAGVHP---------- 377 (652)
T ss_pred CCcchhhh-HHHHHHHhcCcEEEEECCCCCCCC----chHHHHHHHHhCCeEEecCHHHHHHHHhcCCCc----------
Confidence 99999754 335678999999998532211111 122334499999999988887776654310000
Q ss_pred HHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcC--CccccccCccc
Q 006354 404 LFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG--APIGQAYGLTE 481 (649)
Q Consensus 404 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~--~~l~~~YG~TE 481 (649)
.+....++||.+++||+++++++.+++.+.++ ..+.+.||+||
T Consensus 378 -----------------------------------~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE 422 (652)
T TIGR01217 378 -----------------------------------ARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTD 422 (652)
T ss_pred -----------------------------------cccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHH
Confidence 00111248999999999999999999988775 45678999999
Q ss_pred ccccccc-cCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccc--cccccccCCCccch--hhhccCC
Q 006354 482 TCAGSTF-SEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF--NVTAGYFNNPGKTS--EVYKVDE 556 (649)
Q Consensus 482 ~~~~~~~-~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~--~v~~gY~~~~~~t~--~~f~~~~ 556 (649)
++..... .+......+++|.|.+|++++|+| ++++. + +|+.|||+|+|+ +++.|||++++.|+ +.+....
T Consensus 423 ~~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~---~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~ 497 (652)
T TIGR01217 423 ICSCFAGANPTLPVHIGEIQAPGLGTAVQSWD-PEGKP---V-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTY 497 (652)
T ss_pred HhccccCCCCCCCCcCCccCCCcCCCceEEEC-CCCCC---C-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCC
Confidence 7543332 222233458899999999999999 55553 3 589999999996 68999999998765 2332112
Q ss_pred CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhhhhh
Q 006354 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQSCV 634 (649)
Q Consensus 557 ~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~~~~ 634 (649)
+ |||+|||+|++|+||+|+|+||.||+||+ +|+||+|.|||++|.+||.|. +|+|+|.+++..++.+.+++.+.
T Consensus 498 ~--g~~~tGDlg~~d~dG~l~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~-eaavvg~~~~~~ge~~~afVv~~ 571 (652)
T TIGR01217 498 P--GVWRHGDWITLTPRGGIVIHGRSDSTLNP-QGVRMGSAEIYNAVERLDEVR-ESLCIGQEQPDGGYRVVLFVHLA 571 (652)
T ss_pred C--CEEEcCCcEEECCCCcEEEEecccCeEec-CCEEcCHHHHHHHHHhCCCcc-eEEEEeeecCCCCEEEEEEEEEC
Confidence 3 79999999999999999999999999996 599999999999999999999 99999999998887777765543
No 48
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-60 Score=525.55 Aligned_cols=457 Identities=21% Similarity=0.255 Sum_probs=353.8
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCC
Q 006354 77 PWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDT 156 (649)
Q Consensus 77 ~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd 156 (649)
+.++..|+.++|+++++++|+++|+++. ++. +.+||+||.++++++|++|.+.|+++||
T Consensus 11 ~~~~~~~l~~~l~~~a~~~p~~~ai~~~-----------~~~----------~~~Ty~~l~~~~~~~a~~L~~~gv~~gd 69 (534)
T PRK05852 11 ASDFGPRIADLVEVAATRLPEAPALVVT-----------ADR----------IAISYRDLARLVDDLAGQLTRSGLLPGD 69 (534)
T ss_pred hhhhcccHHHHHHHHHHhCCCCcEEEec-----------CCC----------CcccHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 3355689999999999999999999863 221 3699999999999999999999999999
Q ss_pred EEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCC
Q 006354 157 RAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDG 236 (649)
Q Consensus 157 ~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~ 236 (649)
+|+|+++|+++++++++||+++|++++|++|.++.+++.+++++++++.+|++........... .......+.+....
T Consensus 70 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 147 (534)
T PRK05852 70 RVALRMGSNAEFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPT--TRWWPLTVNVGGDS 147 (534)
T ss_pred EEEEECCCcHHHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhcccc--ccccceeeeecccc
Confidence 9999999999999999999999999999999999999999999999999999865332111100 00111111111111
Q ss_pred CCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCC
Q 006354 237 SEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGR 316 (649)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~ 316 (649)
... . ......+.... .............++.|+|+|||||||.||||+++|+++.+.+......+ .+.+
T Consensus 148 ~~~----~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~-~~~~ 216 (534)
T PRK05852 148 GPS----G----GTLSVHLDAAT--EPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY-RLSP 216 (534)
T ss_pred ccc----c----ccccccccccc--CCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CCCC
Confidence 000 0 00000000000 00001111122357889999999999999999999999999998888888 8899
Q ss_pred CcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHH
Q 006354 317 SDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVE 395 (649)
Q Consensus 317 ~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 395 (649)
+|++++.+|++|.+++.. ++.++..|+++++.....+ + ...++..++++++|+++++|.++..+.........
T Consensus 217 ~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~-~-----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 290 (534)
T PRK05852 217 RDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRF-S-----AHTFWDDIKAVGATWYTAVPTIHQILLERAATEPS 290 (534)
T ss_pred cceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCc-C-----HHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccc
Confidence 999999999999999876 6677889998887332111 1 11223339999999999999999988764221100
Q ss_pred hhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCcccc
Q 006354 396 EKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQ 475 (649)
Q Consensus 396 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~ 475 (649)
....+++|.++++|+++++++.+.+.+.+++++++
T Consensus 291 ---------------------------------------------~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~ 325 (534)
T PRK05852 291 ---------------------------------------------GRKPAALRFIRSCSAPLTAETAQALQTEFAAPVVC 325 (534)
T ss_pred ---------------------------------------------cccCCCeeEEEECCCCCCHHHHHHHHHHhCCChhh
Confidence 00114899999999999999999999999999999
Q ss_pred ccCcccccccccccCCC--------CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCcc
Q 006354 476 AYGLTETCAGSTFSEWD--------DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGK 547 (649)
Q Consensus 476 ~YG~TE~~~~~~~~~~~--------~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~ 547 (649)
.||+||++..++..... ....+.+|+ .+|++++|+| ++++. +++|+.|||+|+|+.++.||+++++.
T Consensus 326 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d-~~g~~---~~~g~~Gel~v~g~~v~~gY~~~~~~ 400 (534)
T PRK05852 326 AFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVG-SDGLP---LPAGAVGEVWLRGTTVVRGYLGDPTI 400 (534)
T ss_pred ccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEEC-CCCCC---CCCCCceEEEEecCcccchhcCCccc
Confidence 99999998766644321 112244454 6999999999 45543 68899999999999999999999999
Q ss_pred chhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccch
Q 006354 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASST 627 (649)
Q Consensus 548 t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~ 627 (649)
|++.| .+ |||+|||+|++|+||++++.||.||+||+ +|++|+|.+||++|.+||+|. +|+|+|.++...++.+
T Consensus 401 t~~~~---~~--g~~~TGD~~~~d~dG~l~~~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~V~-~~~v~g~~~~~~g~~~ 473 (534)
T PRK05852 401 TAANF---TD--GWLRTGDLGSLSAAGDLSIRGRIKELINR-GGEKISPERVEGVLASHPNVM-EAAVFGVPDQLYGEAV 473 (534)
T ss_pred chhhh---cC--CCcccCceEEEeCCCcEEEEecchhhEEE-CCEEECHHHHHHHHHhCCCee-eEEEEecCCcCcCceE
Confidence 99998 56 89999999999999999999999999997 599999999999999999999 9999999988766555
Q ss_pred hhh
Q 006354 628 KIF 630 (649)
Q Consensus 628 ~~~ 630 (649)
.++
T Consensus 474 ~~~ 476 (534)
T PRK05852 474 AAV 476 (534)
T ss_pred EEE
Confidence 443
No 49
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=3.9e-60 Score=528.90 Aligned_cols=443 Identities=25% Similarity=0.323 Sum_probs=350.4
Q ss_pred HHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEc
Q 006354 84 MAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAILA 162 (649)
Q Consensus 84 l~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~ 162 (649)
+..+|.+ +++|+++|++... ++ ..+||+||.++++++|++|++ .|+++||+|+|++
T Consensus 43 ~~~l~~~--~~~~~~~a~~~~~----------~~-----------~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~ 99 (560)
T PLN02574 43 VSFIFSH--HNHNGDTALIDSS----------TG-----------FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLL 99 (560)
T ss_pred HHHHhcC--cccCCCCEEEECC----------CC-----------CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEC
Confidence 3455554 6799999998521 12 258999999999999999999 9999999999999
Q ss_pred cCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCC
Q 006354 163 ETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSG 242 (649)
Q Consensus 163 ~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~ 242 (649)
+|+++++++++||+++|++++|++|.++.+++.++++++++++++++.+..+.+... ... ++.++......
T Consensus 100 ~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~--- 170 (560)
T PLN02574 100 PNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL-----GVP-VIGVPENYDFD--- 170 (560)
T ss_pred CCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc-----CCc-EEecCcccccc---
Confidence 999999999999999999999999999999999999999999999998876665432 111 22222110000
Q ss_pred CCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhh----CCCCCCCc
Q 006354 243 VSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTL----IPNPGRSD 318 (649)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~----~~~~~~~d 318 (649)
........+.++...... ........++++++|+|||||||.||||++||+++++.+..+... +.....++
T Consensus 171 ----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (560)
T PLN02574 171 ----SKRIEFPKFYELIKEDFD-FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDN 245 (560)
T ss_pred ----cCccCcccHHHHhhcCCc-ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCc
Confidence 000112345554443322 112234467899999999999999999999999999887765432 21234568
Q ss_pred EEEEccChHHHHHHHH-HHHHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHH
Q 006354 319 VYLAYLPLAHVLELAA-ESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKV 394 (649)
Q Consensus 319 ~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 394 (649)
+++..+|++|.+++.. ++.++..|+++++. ++..+.+. ++++++|++.++|.++..+.+.....
T Consensus 246 ~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~~~~l~~~~~~~- 313 (560)
T PLN02574 246 VYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKV-----------IDRFKVTHFPVVPPILMALTKKAKGV- 313 (560)
T ss_pred EEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHH-----------HHHcCCeEEecCCHHHHHHHhCcccc-
Confidence 8999999999999876 45678889999884 33444444 99999999999999999887632100
Q ss_pred HhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCcc
Q 006354 395 EEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPI 473 (649)
Q Consensus 395 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l 473 (649)
.....+++|.+++||+++++++.+.+.+.+ ++++
T Consensus 314 ---------------------------------------------~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v 348 (560)
T PLN02574 314 ---------------------------------------------CGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDF 348 (560)
T ss_pred ---------------------------------------------ccCccccceEEEEecccCCHHHHHHHHHHCCCCcE
Confidence 001124899999999999999999888877 7899
Q ss_pred ccccCcccccccccccCC--CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhh
Q 006354 474 GQAYGLTETCAGSTFSEW--DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEV 551 (649)
Q Consensus 474 ~~~YG~TE~~~~~~~~~~--~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~ 551 (649)
++.||+||++.+++.... .....+++|+|+|+++++|+|++++.. ++.|+.|||||+|++++.||+++++.|++.
T Consensus 349 ~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~---~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~ 425 (560)
T PLN02574 349 IQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCL---LPPGNCGELWIQGPGVMKGYLNNPKATQST 425 (560)
T ss_pred EecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcC---CCCCCCeEEEEECcchhhhhcCChhHhhhh
Confidence 999999999866543221 223568999999999999999766654 678999999999999999999999999998
Q ss_pred hccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhh
Q 006354 552 YKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKI 629 (649)
Q Consensus 552 f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~ 629 (649)
|. .+ |||+|||+|++++||+++++||.||+||+. |++|+|.|||++|.+||.|. +++|++.+++..++...+
T Consensus 426 ~~--~~--g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~-G~~v~~~eiE~~l~~~~~V~-~~~v~~~~~~~~g~~~~a 497 (560)
T PLN02574 426 ID--KD--GWLRTGDIAYFDEDGYLYIVDRLKEIIKYK-GFQIAPADLEAVLISHPEII-DAAVTAVPDKECGEIPVA 497 (560)
T ss_pred cc--CC--CCcccceEEEEECCCeEEEEecchhheEEC-CEEECHHHHHHHHHhCCCcc-eEEEEccccCCCCcceEE
Confidence 86 56 899999999999999999999999999985 99999999999999999999 999999988876654433
No 50
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-59 Score=533.56 Aligned_cols=466 Identities=14% Similarity=0.115 Sum_probs=354.6
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEc
Q 006354 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILA 162 (649)
Q Consensus 83 tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~ 162 (649)
++.+.+.++ .+|+++|+++.+ . .+..+.+||+||.++++++|++|+++|+++||+|+|++
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~~-----------~-------~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~ 146 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFRG-----------E-------DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYL 146 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEEC-----------C-------CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Confidence 444444332 589999998742 1 13345799999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchh---------HHHHHHhhccCCCccEEEEec
Q 006354 163 ETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ---------LKKLSAVSSSLKTIKNVIYFE 233 (649)
Q Consensus 163 ~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~l~~~~~~~~~~~~ii~~~ 233 (649)
+|++++++++|||+++|++++|++|.++++++.+++++++++++|+++.. .+.+.++...++.++.++.++
T Consensus 147 ~n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 226 (655)
T PRK03584 147 PNIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVP 226 (655)
T ss_pred CCCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEe
Confidence 99999999999999999999999999999999999999999999997653 234444555566666777665
Q ss_pred CCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHH-HHHHHhhCC
Q 006354 234 NDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVAT-AAAIKTLIP 312 (649)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~-~~~~~~~~~ 312 (649)
....... .........|+++...............++++++|+|||||||.||||++||++++.. +......+
T Consensus 227 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~- 300 (655)
T PRK03584 227 YLGPAAA-----AAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC- 300 (655)
T ss_pred cCCCccc-----ccccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc-
Confidence 3321000 0001123456666542222222234556799999999999999999999999997644 55555566
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHH
Q 006354 313 NPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVK 392 (649)
Q Consensus 313 ~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~ 392 (649)
.+.++|+++++.+++|+... ..+.+|+.|+++++.+....... ...++..++++++|++.++|++++.+......
T Consensus 301 ~~~~~d~~~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~----~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 375 (655)
T PRK03584 301 DLGPGDRFFWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPD----PNVLWDLAAEEGVTVFGTSAKYLDACEKAGLV 375 (655)
T ss_pred CCCCCCEEEEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCC----HHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCC
Confidence 88899999999999987543 35678999999998432211111 12233449999999999999999887642100
Q ss_pred HHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc--C
Q 006354 393 KVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM--G 470 (649)
Q Consensus 393 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~--~ 470 (649)
. ......++||.+++||+++++++.+++.+.+ +
T Consensus 376 ~---------------------------------------------~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~ 410 (655)
T PRK03584 376 P---------------------------------------------GETHDLSALRTIGSTGSPLPPEGFDWVYEHVKAD 410 (655)
T ss_pred c---------------------------------------------cccCChhheEEEEEecCCCCHHHHHHHHHHhCCC
Confidence 0 0001124899999999999999999998887 4
Q ss_pred CccccccCccccccccccc-CCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccc--cccccccCCCcc
Q 006354 471 APIGQAYGLTETCAGSTFS-EWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF--NVTAGYFNNPGK 547 (649)
Q Consensus 471 ~~l~~~YG~TE~~~~~~~~-~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~--~v~~gY~~~~~~ 547 (649)
+.+.+.||+||++...... +......+++|.|++|++++|+| +++.. + +|+.|||+|+|+ +++.|||++++.
T Consensus 411 ~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd-~~g~~---~-~g~~GeL~v~gp~p~~~~gy~~~~~~ 485 (655)
T PRK03584 411 VWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVEAWD-EDGRP---V-VGEVGELVCTKPFPSMPLGFWNDPDG 485 (655)
T ss_pred ceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeEEEC-CCCCC---C-CCCceEEEEccCCCCCcceeeCCCcc
Confidence 7899999999986543322 22233458899999999999999 55543 4 689999999996 799999999986
Q ss_pred ch--hhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCccc
Q 006354 548 TS--EVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLAS 625 (649)
Q Consensus 548 t~--~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~ 625 (649)
++ +.+....+ +||+|||+|++|+||+++|+||.||+||+ +|++|+|.|||++|.+||.|. +|+|+|.+++..++
T Consensus 486 ~~~~~~~~~~~~--g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~-~G~rI~p~EIE~~l~~~p~V~-ea~vvg~~~~~~g~ 561 (655)
T PRK03584 486 SRYRDAYFDTFP--GVWRHGDWIEITEHGGVVIYGRSDATLNR-GGVRIGTAEIYRQVEALPEVL-DSLVIGQEWPDGDV 561 (655)
T ss_pred chHHHhhhccCC--CEeecCCeEEECCCCeEEEEeeccCeeec-CcEEECHHHHHHHHHhCCCcc-eEEEEeeEcCCCCE
Confidence 54 22221123 79999999999999999999999999997 599999999999999999999 99999999988777
Q ss_pred chhhhhhh
Q 006354 626 STKIFQSC 633 (649)
Q Consensus 626 ~~~~~~~~ 633 (649)
.+.++..+
T Consensus 562 ~~~a~vv~ 569 (655)
T PRK03584 562 RMPLFVVL 569 (655)
T ss_pred EEEEEEEE
Confidence 66665544
No 51
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3.3e-59 Score=519.53 Aligned_cols=446 Identities=22% Similarity=0.299 Sum_probs=360.8
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.|+.++|++.++++|+++|+.+.+ +. .+..+.+||+||.++++++|++|+++|+++|++|+++
T Consensus 22 ~~~~~~~~~~~~~~p~~~a~~~~~----------~~-------~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~ 84 (538)
T TIGR03208 22 RTINDHFDAAVANCPDKPALTAYR----------DG-------HGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQ 84 (538)
T ss_pred CcHHHHHHHHHHHCCCceEEEeec----------cc-------CCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 589999999999999999998631 11 1223469999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhH-----HHHHHhhccCCCccEEEEecCCC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVSSSLKTIKNVIYFENDG 236 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~l~~~~~~~~~~~~ii~~~~~~ 236 (649)
++|+++++++++||+++|++++|++|.++.+++.++++.+++++++++.... ..........+.++.++..+...
T Consensus 85 ~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (538)
T TIGR03208 85 LPNRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDG 164 (538)
T ss_pred CCCCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCC
Confidence 9999999999999999999999999999999999999999999999987542 22333333445555666654321
Q ss_pred CCccCCCCCCCCCceEeehHHHHhcCCCCC-------CCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHh
Q 006354 237 SEKDSGVSGGISNWTVSSFSEVEKLGKRSP-------VDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT 309 (649)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~ 309 (649)
. ..++.+........ .......++++++|+|||||||.||||+++|+++...+.....
T Consensus 165 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~ 229 (538)
T TIGR03208 165 D---------------DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAE 229 (538)
T ss_pred C---------------cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHh
Confidence 1 11222221110000 0112346789999999999999999999999999999988888
Q ss_pred hCCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHH
Q 006354 310 LIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR 385 (649)
Q Consensus 310 ~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 385 (649)
.+ .+..+|++++++|++|..++.. ++.+++.|+++++. ++..+.+. ++++++|++.++|.++..
T Consensus 230 ~~-~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------l~~~~vt~~~~~p~~~~~ 297 (538)
T TIGR03208 230 RL-ELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAEL-----------IRETGVTFTMASTPFLTD 297 (538)
T ss_pred hc-CCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHH-----------HHHhCCeEEecCHHHHHH
Confidence 87 8889999999999999988765 67789999999884 44444444 999999999999999988
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHH
Q 006354 386 VREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFI 465 (649)
Q Consensus 386 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~ 465 (649)
+........ ...+++|.+++||+++++++.+++
T Consensus 298 l~~~~~~~~-----------------------------------------------~~~~~l~~~~~gG~~~~~~~~~~~ 330 (538)
T TIGR03208 298 LCRAVKESG-----------------------------------------------APVPSLFTFLCAGAPIPGILVERA 330 (538)
T ss_pred HHhchhccC-----------------------------------------------CCCCcceEEEEcCCCCCHHHHHHH
Confidence 765321100 011489999999999999999998
Q ss_pred HhhcCCccccccCcccccccccccCCCC--CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccC
Q 006354 466 NICMGAPIGQAYGLTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFN 543 (649)
Q Consensus 466 ~~~~~~~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~ 543 (649)
.+.+++++++.||+||++.+.+...... ....++|+|+|+++++|+| +++.. ++.|+.|||+|+|++++.||++
T Consensus 331 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~---~~~g~~Gel~v~g~~~~~gy~~ 406 (538)
T TIGR03208 331 WELLGALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAK---LSQGETGRLLVRGCSNFGGYLK 406 (538)
T ss_pred HHHcCCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCC---CcCCCCcEEEEecCcccccccC
Confidence 8888999999999999987765544322 2236899999999999999 45543 6789999999999999999999
Q ss_pred CCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCc
Q 006354 544 NPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKL 623 (649)
Q Consensus 544 ~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~ 623 (649)
+|+.|.. . .+ |||+|||+|++++||+++++||.||+||+ +|++|+|.+||++|.+||+|. +++|++.++...
T Consensus 407 ~~~~~~~--~--~~--~~~~TGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~p~eIE~~l~~~~~v~-~~~v~~~~~~~~ 478 (538)
T TIGR03208 407 RPHLNST--D--AE--GWFDTGDLAFQDAEGYIRINGRSKDVIIR-GGENIPVVEIENLLYQHPAVA-QVAIVAYPDERL 478 (538)
T ss_pred Ccccccc--c--CC--CceeccceEEECCCCcEEEEeccCceEEE-CCEEECHHHHHHHHhcCccee-eEEEEeccCCCC
Confidence 9988752 2 44 89999999999999999999999999996 599999999999999999999 999999988876
Q ss_pred ccchhhh
Q 006354 624 ASSTKIF 630 (649)
Q Consensus 624 ~~~~~~~ 630 (649)
++...++
T Consensus 479 g~~~~a~ 485 (538)
T TIGR03208 479 GERACAV 485 (538)
T ss_pred CceEEEE
Confidence 6554444
No 52
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=2.2e-59 Score=520.61 Aligned_cols=441 Identities=22% Similarity=0.277 Sum_probs=361.5
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..++.++|+++++++|+++|+.. +++ .+||+||.+++.++|..|.+.|+++|++|++
T Consensus 20 ~~~l~~~l~~~a~~~p~~~a~~~------------~~~-----------~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v 76 (542)
T PRK06155 20 ERTLPAMLARQAERYPDRPLLVF------------GGT-----------RWTYAEAARAAAAAAHALAAAGVKRGDRVAL 76 (542)
T ss_pred ccCHHHHHHHHHHHCCCCeEEEe------------CCc-----------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 46899999999999999999985 333 5999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|+++++++++||+++|++++|+++.++.+++..+++++++++++++.+....+.........++.++.++......
T Consensus 77 ~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 155 (542)
T PRK06155 77 MCGNRIEFLDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVS- 155 (542)
T ss_pred ECCCChHHHHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccc-
Confidence 9999999999999999999999999999999999999999999999999988777766544433455566555332100
Q ss_pred CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEE
Q 006354 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~ 320 (649)
....+... ++.. ...........++++++|+|||||||.||||+++|+++.+........+ .+.+++++
T Consensus 156 -----~~~~~~~~---~~~~--~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~-~~~~~~~~ 224 (542)
T PRK06155 156 -----VPAGWSTA---PLPP--LDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL-EIGADDVL 224 (542)
T ss_pred -----cccccchh---hhcc--cCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc-CCCCCCEE
Confidence 00011111 1111 1111112344678999999999999999999999999998887777777 88999999
Q ss_pred EEccChHHHHHHHHHHHHHHhCceEEeCC---cccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhh
Q 006354 321 LAYLPLAHVLELAAESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEK 397 (649)
Q Consensus 321 l~~~pl~h~~~~~~~~~~l~~G~~l~~~~---~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~ 397 (649)
++.+|++|..++...+.++..|+++++.+ +..+.+. ++++++|++.++|+++..+.......
T Consensus 225 l~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-----------l~~~~~t~~~~~p~~~~~l~~~~~~~---- 289 (542)
T PRK06155 225 YTTLPLFHTNALNAFFQALLAGATYVLEPRFSASGFWPA-----------VRRHGATVTYLLGAMVSILLSQPARE---- 289 (542)
T ss_pred EEecCHHHHHHHHHHHHHHHcCceEEeeCCCCHHHHHHH-----------HHHhCCcEEEchHHHHHHHHcCcCcc----
Confidence 99999999999988889999999998843 3444444 99999999999999998876532110
Q ss_pred cchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCcccccc
Q 006354 398 GGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAY 477 (649)
Q Consensus 398 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~Y 477 (649)
....+++|.++.|| +++++.+.+++.+++++++.|
T Consensus 290 -------------------------------------------~~~~~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~Y 324 (542)
T PRK06155 290 -------------------------------------------SDRAHRVRVALGPG--VPAALHAAFRERFGVDLLDGY 324 (542)
T ss_pred -------------------------------------------ccccCceEEEEEcC--CCHHHHHHHHHHcCCCEEeee
Confidence 00114788877665 578888888888899999999
Q ss_pred CcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccc---cccccccCCCccchhhhcc
Q 006354 478 GLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF---NVTAGYFNNPGKTSEVYKV 554 (649)
Q Consensus 478 G~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~---~v~~gY~~~~~~t~~~f~~ 554 (649)
|+||++.++.... .....+++|.|.++++++|+| ++++. ++.|..|||+|+|+ +++.||+++++.|++.|
T Consensus 325 G~tE~~~~~~~~~-~~~~~~~vG~~~~~~~~~i~d-~~~~~---~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-- 397 (542)
T PRK06155 325 GSTETNFVIAVTH-GSQRPGSMGRLAPGFEARVVD-EHDQE---LPDGEPGELLLRADEPFAFATGYFGMPEKTVEAW-- 397 (542)
T ss_pred cccccCccccCCC-CCCCCCCcCccCCCceEEEEC-CCCCC---CCCCCceEEEEecCCccccchhhcCCHHHHHHhh--
Confidence 9999988766543 234568899999999999998 44543 67899999999998 79999999999999988
Q ss_pred CCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchh
Q 006354 555 DERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTK 628 (649)
Q Consensus 555 ~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~ 628 (649)
.+ +||+|||+|++++||+++|+||.||+||+ +|++|+|.+||++|.+||+|. +|+|++..++..++.+.
T Consensus 398 -~~--~~~~TGD~~~~~~dG~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~~~V~-~~~v~~v~~~~~~~~~~ 466 (542)
T PRK06155 398 -RN--LWFHTGDRVVRDADGWFRFVDRIKDAIRR-RGENISSFEVEQVLLSHPAVA-AAAVFPVPSELGEDEVM 466 (542)
T ss_pred -cC--CcEeccceEEEcCCceEEEEecCCCEEEe-CCEEECHHHHHHHHHhCCCee-EEEEEeecccccCceEE
Confidence 56 89999999999999999999999999997 599999999999999999999 99999998876654443
No 53
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-59 Score=517.29 Aligned_cols=447 Identities=23% Similarity=0.328 Sum_probs=376.3
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.++|+++++.+|+++|+.+ +++ .+||+||.+++.++|+.|++.|+++||+|+++
T Consensus 5 ~~i~~~l~~~~~~~~~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~ 61 (513)
T PRK07656 5 MTLPELLARAARRFGDKEAYVF------------GDQ-----------RLTYAELNARVRRAAAALAALGIGKGDRVAIW 61 (513)
T ss_pred ccHHHHHHHHHHHCCCCeEEEe------------CCC-----------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 6899999999999999999986 443 69999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|++++|+++.++.+++..+++++++++++++..............+.++.++..........
T Consensus 62 ~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 140 (513)
T PRK07656 62 APNSPHWVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPH- 140 (513)
T ss_pred CCCChHHHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccC-
Confidence 9999999999999999999999999999999999999999999999999877776666555666666666544322110
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEE
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l 321 (649)
.....+|+++...... ........++++++|+|||||||.||+|.++|+++.+.+......+ .+.++|+++
T Consensus 141 -------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~ 211 (513)
T PRK07656 141 -------TEKMKTFTDFLAAGDP-AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL-GLTEGDRYL 211 (513)
T ss_pred -------ccccccHHHHHhcCCC-CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh-CCCCCCeEE
Confidence 0123456666544322 1223455788999999999999999999999999999998888887 899999999
Q ss_pred EccChHHHHHHHH-HHHHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhh
Q 006354 322 AYLPLAHVLELAA-ESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEK 397 (649)
Q Consensus 322 ~~~pl~h~~~~~~-~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~ 397 (649)
+.+|++|.+++.. ++.++..|+++++. ++..+.+. ++++++|++.++|.++..+........
T Consensus 212 ~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~p~~~~~l~~~~~~~~--- 277 (513)
T PRK07656 212 AANPFFHVFGYKAGVNAPLMRGATILPLPVFDPDEVFRL-----------IETERITVLPGPPTMYNSLLQHPDRSA--- 277 (513)
T ss_pred EccchHHHHHHHHHHHHHHHcCceEEecCcCCHHHHHHH-----------HHHhCCeEEechHHHHHHHHcCCCcCC---
Confidence 9999999999876 67789999999883 33334444 999999999999999999876421100
Q ss_pred cchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCC-ccccc
Q 006354 398 GGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA-PIGQA 476 (649)
Q Consensus 398 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~-~l~~~ 476 (649)
...+++|.+++||+++++++.+.+.+.+++ ++++.
T Consensus 278 --------------------------------------------~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~ 313 (513)
T PRK07656 278 --------------------------------------------EDLSSLRLAVTGAASMPVALLERFESELGVDIVLTG 313 (513)
T ss_pred --------------------------------------------CCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeE
Confidence 011489999999999999999999998888 89999
Q ss_pred cCcccccccccccCCCCC-C--CCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhc
Q 006354 477 YGLTETCAGSTFSEWDDP-S--VGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYK 553 (649)
Q Consensus 477 YG~TE~~~~~~~~~~~~~-~--~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~ 553 (649)
||+||++++++.+..... . .+++|.|+++++++|+| +++.. ++.|..|||+|+|+.++.||+++++.+...|.
T Consensus 314 YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~---~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 389 (513)
T PRK07656 314 YGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGEE---VPVGEVGELLVRGPNVMKGYYDDPEATAAAID 389 (513)
T ss_pred EccccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCCC---CCCCCceEEEEEcchhhhhhcCCHHHHhhhhc
Confidence 999999887776654332 2 57999999999999999 44543 67899999999999999999999999988874
Q ss_pred cCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhh
Q 006354 554 VDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKI 629 (649)
Q Consensus 554 ~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~ 629 (649)
.+ +||+|||+|++++||.++++||.||+||+ +|++|+|.+||++|.++|+|. +++|++..+...++...+
T Consensus 390 --~~--~~~~tGDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~i~-~~~v~~~~~~~~g~~~~~ 459 (513)
T PRK07656 390 --AD--GWLHTGDLGRLDEEGYLYIVDRKKDMFIV-GGFNVYPAEVEEVLYEHPAVA-EAAVIGVPDERLGEVGKA 459 (513)
T ss_pred --cC--CceeccceEEEcCCeeEEEEecccceEEe-CCEEeCHHHHHHHHHhCCCee-EEEEEecCCcccCceEEE
Confidence 46 89999999999999999999999999998 599999999999999999999 999999988776654433
No 54
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=3.6e-59 Score=516.99 Aligned_cols=455 Identities=19% Similarity=0.244 Sum_probs=361.4
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..++.++|+++++++|+++|+.+. ++. +.++.+||+||.++++++|+.|.++|+++||+|++
T Consensus 6 ~~~l~~~~~~~a~~~p~~~a~~~~-----------~~~-------~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i 67 (517)
T PRK08008 6 GQHLRQMWDDLADVYGHKTALIFE-----------SSG-------GVVRRYSYLELNEEINRTANLFYSLGIRKGDKVAL 67 (517)
T ss_pred cccHHHHHHHHHHHCCCceEEEcc-----------cCC-------CccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 468999999999999999999874 221 33457999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhcc-CCCccEEEEecCCCCCc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSS-LKTIKNVIYFENDGSEK 239 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~-~~~~~~ii~~~~~~~~~ 239 (649)
+++|+++++++++||+++|++++|++|.++.+++.+++++++++.++++.+..+.+.++... ...++.++..+.....
T Consensus 68 ~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 146 (517)
T PRK08008 68 HLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPA- 146 (517)
T ss_pred EcCCCHHHHHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcc-
Confidence 99999999999999999999999999999999999999999999999999887777665433 2345555554432111
Q ss_pred cCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcE
Q 006354 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (649)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~ 319 (649)
.....+++++............+..++++++|+|||||||.||||++||++++.......... .+..+++
T Consensus 147 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~~~ 216 (517)
T PRK08008 147 ---------DDGVSSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQC-ALRDDDV 216 (517)
T ss_pred ---------cccccCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhc-CCCCCCe
Confidence 112334555443322222222344678999999999999999999999999986554433333 6778999
Q ss_pred EEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhc
Q 006354 320 YLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~ 398 (649)
+++.+|++|..+... ++.++..|+++++.+... ...++..++++++|++.++|.+++.+.........
T Consensus 217 ~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~--- 285 (517)
T PRK08008 217 YLTVMPAFHIDCQCTAAMAAFSAGATFVLLEKYS--------ARAFWGQVCKYRATITECIPMMIRTLMVQPPSAND--- 285 (517)
T ss_pred EEEecCcHHHHHHHHHHHHHHhcCcEEEEccccC--------HHHHHHHHHHcCCcEEechHHHHHHHHhCCCcccc---
Confidence 999999999876554 677899999999843321 11233338999999999999999887642110000
Q ss_pred chhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccC
Q 006354 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (649)
Q Consensus 399 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG 478 (649)
...+++.++.+ .+++++....|.+.+++++++.||
T Consensus 286 --------------------------------------------~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~YG 320 (517)
T PRK08008 286 --------------------------------------------RQHCLREVMFY-LNLSDQEKDAFEERFGVRLLTSYG 320 (517)
T ss_pred --------------------------------------------ccccceeeEEe-cCCCHHHHHHHHHHhCCeEEeecc
Confidence 00257777665 478888888888888999999999
Q ss_pred cccccccccccCC-CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcc---ccccccccCCCccchhhhcc
Q 006354 479 LTETCAGSTFSEW-DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGG---FNVTAGYFNNPGKTSEVYKV 554 (649)
Q Consensus 479 ~TE~~~~~~~~~~-~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g---~~v~~gY~~~~~~t~~~f~~ 554 (649)
+||++..++.... .....+++|.|+++++++|+| +++.. ++.|+.|||+++| ++++.||+++++.|++.|.
T Consensus 321 ~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~---~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~- 395 (517)
T PRK08008 321 MTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRD-DHNRP---LPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLE- 395 (517)
T ss_pred ccccccccccCCccccccCCccccCCCCcEEEEEC-CCCCC---CCCCCcceEEEeCCCCcchhhhHhCChHHHhhccc-
Confidence 9999865554332 233457899999999999999 55544 6789999999998 6999999999999999996
Q ss_pred CCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhh
Q 006354 555 DERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIF 630 (649)
Q Consensus 555 ~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~ 630 (649)
.+ |||+|||+|++++||+++++||.||+||+ +|++|+|.+||+++.+||.|. +|+|+|..+...++.+.++
T Consensus 396 -~~--g~~~TGDl~~~~~~g~~~~~GR~~d~i~~-~G~~i~p~~iE~~l~~~~~v~-~~~v~g~~~~~~~~~~~~~ 466 (517)
T PRK08008 396 -AD--GWLHTGDTGYVDEEGFFYFVDRRCNMIKR-GGENVSCVELENIIATHPKIQ-DIVVVGIKDSIRDEAIKAF 466 (517)
T ss_pred -CC--CCeeccceEEECCCCcEEEeecccceEEe-CCEEECHHHHHHHHHhCCcee-eEEEEccCCCCCCceEEEE
Confidence 56 89999999999999999999999999997 599999999999999999999 9999999887766544433
No 55
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.4e-59 Score=511.96 Aligned_cols=419 Identities=26% Similarity=0.336 Sum_probs=352.6
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
+|+.++|+++++++||++|+.+ ++ +.+||+||.++++++|+.|.+.|+++||+|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~------------~~-----------~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~ 58 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEF------------EE-----------KKVTFMELHEAVVSVAGKLAALGVKKGDRVALL 58 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEe------------CC-----------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 6899999999999999999985 22 369999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|++++++++|||+++|++++|+++..+.+++.+++++++++.++++......+....
T Consensus 59 ~~~~~~~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~--------------------- 117 (483)
T PRK03640 59 MKNGMEMILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI--------------------- 117 (483)
T ss_pred CCCCHHHHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc---------------------
Confidence 99999999999999999999999999999999999999999999999887655433211
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEE
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l 321 (649)
...++++...............++++++++|||||||.||+|++||+++...+......+ ++.++|+++
T Consensus 118 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~d~~l 186 (483)
T PRK03640 118 ----------SVKFAELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-GLTEDDCWL 186 (483)
T ss_pred ----------cccHHHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-CCCcCcEEE
Confidence 011333332221111222344678999999999999999999999999988887777777 889999999
Q ss_pred EccChHHHHHHHHHHHHHHhCceEEeCC---cccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhc
Q 006354 322 AYLPLAHVLELAAESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (649)
Q Consensus 322 ~~~pl~h~~~~~~~~~~l~~G~~l~~~~---~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~ 398 (649)
+.+|++|+.++..++.++..|+++++.+ +..+.+. ++++++|++.++|+++..+.......
T Consensus 187 ~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~-----------i~~~~~t~l~~~P~~~~~l~~~~~~~----- 250 (483)
T PRK03640 187 AAVPIFHISGLSILMRSVIYGMRVVLVEKFDAEKINKL-----------LQTGGVTIISVVSTMLQRLLERLGEG----- 250 (483)
T ss_pred EecCHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHH-----------HHHhCCcEEEeHHHHHHHHHhCcCcc-----
Confidence 9999999999988888999999999844 3334333 99999999999999999887532110
Q ss_pred chhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccC
Q 006354 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (649)
Q Consensus 399 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG 478 (649)
....++|.+++||+++++.+.+.++.. ++++++.||
T Consensus 251 -------------------------------------------~~~~~lr~~~~~g~~~~~~~~~~~~~~-~~~~~~~YG 286 (483)
T PRK03640 251 -------------------------------------------TYPSSFRCMLLGGGPAPKPLLEQCKEK-GIPVYQSYG 286 (483)
T ss_pred -------------------------------------------ccCCcceEEEEcCCCCCHHHHHHHHHh-CCCeeeeec
Confidence 001389999999999999999988874 999999999
Q ss_pred cccccccccccCC--CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC
Q 006354 479 LTETCAGSTFSEW--DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE 556 (649)
Q Consensus 479 ~TE~~~~~~~~~~--~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~ 556 (649)
+||++..+..... .....+++|+|+++++++|.+ ++ . +++.|..|||+|+|++++.||+++++.+.+.| .
T Consensus 287 ~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~-~~-~---~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~---~ 358 (483)
T PRK03640 287 MTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEK-DG-V---VVPPFEEGEIVVKGPNVTKGYLNREDATRETF---Q 358 (483)
T ss_pred cCcccccccccCcccccccCCCcccccCCcEEEEec-CC-C---cCCCCCceEEEEECcchhhhhcCCHHHHHHHH---h
Confidence 9998764433322 234558999999999999998 32 2 37889999999999999999999999999998 5
Q ss_pred CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccch
Q 006354 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASST 627 (649)
Q Consensus 557 ~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~ 627 (649)
+ +||+|||++++++||.++++||+||++|+ +|++|+|.+||+++.++|+|. +++|++.++...++..
T Consensus 359 ~--~~~~tGDl~~~~~~g~l~~~GR~~~~i~~-~G~~v~~~~ie~~i~~~~~v~-~~~v~~~~~~~~~~~~ 425 (483)
T PRK03640 359 D--GWFKTGDIGYLDEEGFLYVLDRRSDLIIS-GGENIYPAEIEEVLLSHPGVA-EAGVVGVPDDKWGQVP 425 (483)
T ss_pred c--CCeeccceEEEcCCCCEEEeecccCeEEe-CCEEECHHHHHHHHHhCCCee-EEEEEeCCCcccCCce
Confidence 6 89999999999999999999999999997 599999999999999999999 9999998887655443
No 56
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=3.6e-59 Score=517.86 Aligned_cols=445 Identities=21% Similarity=0.268 Sum_probs=360.1
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q 006354 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (649)
Q Consensus 80 ~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~ 159 (649)
...++.++|+++++++|+++|+.+ +++ .+||+||.++++++|..|++.|+++|++|+
T Consensus 21 ~~~~l~~~~~~~a~~~p~~~a~~~------------~~~-----------~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~ 77 (527)
T TIGR02275 21 QDKPLTDILRDQAARYPDAIAIIC------------GNR-----------QWSYRELDQRADNLAAGLTKLGIGQGDTAV 77 (527)
T ss_pred cCCcHHHHHHHHHHHCCCceEEEe------------CCc-----------eecHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 346899999999999999999975 333 699999999999999999999999999999
Q ss_pred EEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHH-----HHHHhhccCCCccEEEEecC
Q 006354 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLK-----KLSAVSSSLKTIKNVIYFEN 234 (649)
Q Consensus 160 i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~l~~~~~~~~~~~~ii~~~~ 234 (649)
++++|+++++++++||+++|++++++++.++.+++.++++.+++++++++..... .........+.++.++....
T Consensus 78 i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (527)
T TIGR02275 78 VQLPNIAEFYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQ 157 (527)
T ss_pred EECCCcHHHHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecC
Confidence 9999999999999999999999999999999999999999999999999865421 22222233444555554332
Q ss_pred CCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCC
Q 006354 235 DGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP 314 (649)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~ 314 (649)
.... ........... .........++++|+|+|||||||.||||++||+++...+......+ .+
T Consensus 158 ~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~ 221 (527)
T TIGR02275 158 TRVE--------------AELFLWLESPA-EPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-WL 221 (527)
T ss_pred CCCc--------------chhhHHhhCcC-ccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CC
Confidence 1100 00111111111 11122345678999999999999999999999999999988887777 88
Q ss_pred CCCcEEEEccChHHHHHHHH--HHHHHHhCceEEeCC---cccccccchhhccCccccceeecceEEEechHHHHHHHHH
Q 006354 315 GRSDVYLAYLPLAHVLELAA--ESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (649)
Q Consensus 315 ~~~d~~l~~~pl~h~~~~~~--~~~~l~~G~~l~~~~---~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 389 (649)
+++|++++.+|++|.+++.. .+.++..|+++++.+ +..+.+ .++++++|++.++|.++..+.+.
T Consensus 222 ~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~-----------~i~~~~~t~~~~~p~~~~~l~~~ 290 (527)
T TIGR02275 222 TQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAPDPSPTDCFP-----------LIERHKVTVTALVPPAVALWMQA 290 (527)
T ss_pred CcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECCCCCHHHHHH-----------HHHHhCCeEEEecHHHHHHHHhC
Confidence 99999999999999999764 677899999998843 333333 38999999999999999887654
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc
Q 006354 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (649)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~ 469 (649)
..... ...+++|.+++||+++++++.+.+.+.+
T Consensus 291 ~~~~~-----------------------------------------------~~~~~lr~~~~gG~~l~~~~~~~~~~~~ 323 (527)
T TIGR02275 291 ASKSR-----------------------------------------------YDLSSLKLLQVGGAKFSEAAARRVPAVF 323 (527)
T ss_pred ccccC-----------------------------------------------CCccceEEEEEcCCCCCHHHHHHHHHHh
Confidence 22100 0114899999999999999999999988
Q ss_pred CCccccccCcccccccccccC-CCCCCCCccCCCc-ccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCcc
Q 006354 470 GAPIGQAYGLTETCAGSTFSE-WDDPSVGRVGPPV-PCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGK 547 (649)
Q Consensus 470 ~~~l~~~YG~TE~~~~~~~~~-~~~~~~~~vG~p~-p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~ 547 (649)
++++++.||+||++...+... ......+++|+|+ ++++++|+| +++.. +++|+.|||+|+|+.++.||+++++.
T Consensus 324 g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~---~~~g~~Gei~v~g~~~~~gY~~~~~~ 399 (527)
T TIGR02275 324 GCQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVD-DHGNP---VAPGETGMLLTRGPYTFRGYYKAPEH 399 (527)
T ss_pred CCeEEeeeccCccCccccCCCCccccccccCCCCCCCCceEEEEC-CCCCC---CCCCCceEEEecCCccchhhcCChhH
Confidence 999999999999764433221 1223347899999 589999998 55543 67899999999999999999999999
Q ss_pred chhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccch
Q 006354 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASST 627 (649)
Q Consensus 548 t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~ 627 (649)
|.+.|. .+ |||+|||+|++++||++++.||.||+||+ +|++|+|.+||++|.+||+|. +|+|++.++...++.+
T Consensus 400 ~~~~~~--~d--g~~~TGDl~~~~~~g~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~-~~~v~~~~~~~~~~~~ 473 (527)
T TIGR02275 400 NAAAFD--AE--GFYYTGDLVRLTPEGYIVVVGRAKDQINR-GGEKIAAEEIENLLLAHPAVH-DAALVSMPDELLGEKS 473 (527)
T ss_pred hHhhcC--cC--CCEEcCceEEEcCCccEEEEecccceeec-CCEEECHHHHHHHHHhCCCce-EEEEEecCCcccccEE
Confidence 999986 56 89999999999999999999999999996 599999999999999999999 9999999998876555
Q ss_pred hhhh
Q 006354 628 KIFQ 631 (649)
Q Consensus 628 ~~~~ 631 (649)
.++.
T Consensus 474 ~a~v 477 (527)
T TIGR02275 474 CAFI 477 (527)
T ss_pred EEEE
Confidence 4443
No 57
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-59 Score=514.82 Aligned_cols=431 Identities=23% Similarity=0.310 Sum_probs=356.9
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEE
Q 006354 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAIL 161 (649)
Q Consensus 83 tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~ 161 (649)
.+.+.|+++|+++|+++|+.. +++ .+||+||.++++++|++|++ .|+.+|++|+++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~------------~~~-----------~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~ 59 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIIT------------EEE-----------EMTYKQLHEYVSKVAAYLIYELNVKKGERIAIL 59 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEE------------CCc-----------eEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 578999999999999999985 443 69999999999999999985 799999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|++++|+++.++++++.++++.+++++++++++..+.+.+..... ....++.+.
T Consensus 60 ~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~-------- 130 (496)
T PRK06839 60 SQNSLEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVS-YVQRVISIT-------- 130 (496)
T ss_pred CCCCHHHHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhcc-CcceEEEec--------
Confidence 99999999999999999999999999999999999999999999999988776665543322 112222221
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEE
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l 321 (649)
+++++.... ........++++++|+|||||||.||+|+++|+++..........+ .+..+|+++
T Consensus 131 ------------~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l 194 (496)
T PRK06839 131 ------------SLKEIEDRK---IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI-DLTMHDRSI 194 (496)
T ss_pred ------------chHhhhccC---CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc-CCCCCCeEE
Confidence 222222211 1122345678999999999999999999999999987777666677 788999999
Q ss_pred EccChHHHHHHHH-HHHHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhh
Q 006354 322 AYLPLAHVLELAA-ESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEK 397 (649)
Q Consensus 322 ~~~pl~h~~~~~~-~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~ 397 (649)
..+|++|..++.. .+.++..|+++++. ++..+.+. ++++++|++.++|.+++.+.......
T Consensus 195 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~~~~l~~~~~~~---- 259 (496)
T PRK06839 195 VLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTKALSM-----------IEKHKVTVVMGVPTIHQALINCSKFE---- 259 (496)
T ss_pred EeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHHHHHH-----------HHhhCCeEEEehHHHHHHHHhCcccc----
Confidence 9999999998765 56789999999884 33334444 99999999999999999987632110
Q ss_pred cchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCcccccc
Q 006354 398 GGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAY 477 (649)
Q Consensus 398 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~Y 477 (649)
....+++|.+++||+++++++.+.+++. |+++++.|
T Consensus 260 -------------------------------------------~~~~~~lr~~~~gG~~~~~~~~~~~~~~-g~~~~~~Y 295 (496)
T PRK06839 260 -------------------------------------------TTNLQSVRWFYNGGAPCPEELMREFIDR-GFLFGQGF 295 (496)
T ss_pred -------------------------------------------cCCCcccceEEECCCCCCHHHHHHHHHh-CCeeEeec
Confidence 0112489999999999999999999886 99999999
Q ss_pred CcccccccccccCCC--CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccC
Q 006354 478 GLTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD 555 (649)
Q Consensus 478 G~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~ 555 (649)
|+||++..++..... ....+++|+|+++++++|+|+ +++. ++.|+.|||+|+|+.++.||+++++.++..+
T Consensus 296 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~---~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~--- 368 (496)
T PRK06839 296 GMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDE-NKNK---VEVGEVGELLIRGPNVMKEYWNRPDATEETI--- 368 (496)
T ss_pred cCCCCCcceEecccccccccCCCCcccCCCceEEEECC-CcCC---CCCCCceEEEEECCCcchhhcCChHHHHHHH---
Confidence 999998755433322 234589999999999999994 4443 7899999999999999999999999998887
Q ss_pred CCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhh
Q 006354 556 ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQ 631 (649)
Q Consensus 556 ~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~ 631 (649)
.+ |||+|||+|++++||++++.||.||+||. +|++|+|.+||++|.++|+|. +|+|+|.+++..++...++.
T Consensus 369 ~~--g~~~TGDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~~iE~~l~~~~~v~-~~~v~~~~~~~~g~~~~~~v 440 (496)
T PRK06839 369 QD--GWLCTGDLARVDEDGFVYIVGRKKEMIIS-GGENIYPLEVEQVINKLSDVY-EVAVVGRQHVKWGEIPIAFI 440 (496)
T ss_pred cC--CCeeecceEEEcCCCcEEEeccccceEEE-CCEEECHHHHHHHHHhCCCee-EEEEEeccccccCceEEEEE
Confidence 56 89999999999999999999999999997 599999999999999999999 99999999988776544443
No 58
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=6.4e-59 Score=520.40 Aligned_cols=451 Identities=21% Similarity=0.287 Sum_probs=347.3
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.|+.++|++.++++|+++|+.+ ++. .+||+||.++++++|++|.++|+++||+|+|+
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~------------~~~-----------~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~ 70 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIY------------GKT-----------RFTWPQTYDRCCRLAASLISLNITKNDVVSVL 70 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEE------------CCc-----------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 4789999999999999999986 333 69999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCC-----ccEEEEecCCC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKT-----IKNVIYFENDG 236 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~-----~~~ii~~~~~~ 236 (649)
++|++++++++|||+++|++++|++|.++.+++.++|+.++++++|++.+..+.+.++....+. ...++.++...
T Consensus 71 ~~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (579)
T PLN03102 71 APNTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEID 150 (579)
T ss_pred cCCcHHHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccc
Confidence 9999999999999999999999999999999999999999999999998887776665443321 12244443221
Q ss_pred CCccCCCCCCCCCceEeehHHHHhcCCCCCCC----CCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCC
Q 006354 237 SEKDSGVSGGISNWTVSSFSEVEKLGKRSPVD----PSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIP 312 (649)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~ 312 (649)
... .+.....++.++.......... .....++++++|+|||||||.||||+++|+++..........+
T Consensus 151 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~- 222 (579)
T PLN03102 151 FPK-------RPSSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGW- 222 (579)
T ss_pred ccc-------CCcccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhc-
Confidence 110 0011223455554433221111 1234578999999999999999999999999765544444444
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCC---cccccccchhhccCccccceeecceEEEechHHHHHHHHH
Q 006354 313 NPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (649)
Q Consensus 313 ~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~---~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 389 (649)
.+...++++..+|++|..++...+.++..|+++++.. +..+.+ .|+++++|++.++|+++..|.+.
T Consensus 223 ~~~~~~~~l~~~pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~-----------~i~~~~~t~~~~~P~~~~~l~~~ 291 (579)
T PLN03102 223 EMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYK-----------NIEMHNVTHMCCVPTVFNILLKG 291 (579)
T ss_pred CCCCCCeEEecCChhhhcchhHHHHHHHhcCcEEeeccCChHHHHH-----------HHHHcCCeEEEeChHHHHHHHhC
Confidence 5667789999999999999887777888999888733 333333 39999999999999999998763
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc
Q 006354 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (649)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~ 469 (649)
...... ..++++.+++||+++++.+.++++. +
T Consensus 292 ~~~~~~-----------------------------------------------~~~~~~~~~~gg~~~~~~~~~~~~~-~ 323 (579)
T PLN03102 292 NSLDLS-----------------------------------------------PRSGPVHVLTGGSPPPAALVKKVQR-L 323 (579)
T ss_pred cccccC-----------------------------------------------CcccceEEEECCCCCCHHHHHHHHH-c
Confidence 211000 0025778999999999999998876 5
Q ss_pred CCccccccCcccccccccccCCCC--------------CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccc
Q 006354 470 GAPIGQAYGLTETCAGSTFSEWDD--------------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGF 535 (649)
Q Consensus 470 ~~~l~~~YG~TE~~~~~~~~~~~~--------------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~ 535 (649)
|+++++.||+||+++.++...... ...+..+.++++ +.+.+.+.+...+ .+.++.|||+|+|+
T Consensus 324 g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--v~i~~~~~~~~v~-~~~~~~GEl~v~g~ 400 (579)
T PLN03102 324 GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLAD--VDVKNKETQESVP-RDGKTMGEIVIKGS 400 (579)
T ss_pred CCeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccc--eEEeccccccccC-CCCCCceEEEEECc
Confidence 999999999999886543321110 112333444444 4555644443321 12246899999999
Q ss_pred cccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEE
Q 006354 536 NVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRL 615 (649)
Q Consensus 536 ~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V 615 (649)
.++.|||++|+.|++.| .+ |||+|||+|++|+||++++.||.||+||+ +|++|+|.|||++|.+||.|. +++|
T Consensus 401 ~~~~GY~~~~~~t~~~f---~~--gw~~TGDlg~~d~dG~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~-~a~v 473 (579)
T PLN03102 401 SIMKGYLKNPKATSEAF---KH--GWLNTGDVGVIHPDGHVEIKDRSKDIIIS-GGENISSVEVENVLYKYPKVL-ETAV 473 (579)
T ss_pred chhhhhcCChhhhHhhh---cc--CceecCceEEEcCCCeEEEEeccCcEEEE-CCEEECHHHHHHHHHhCCCcc-eeEE
Confidence 99999999999999999 66 89999999999999999999999999997 599999999999999999999 9999
Q ss_pred EecCCCCcccchhhhhh
Q 006354 616 WRNGPMKLASSTKIFQS 632 (649)
Q Consensus 616 ~g~~~~~~~~~~~~~~~ 632 (649)
++.+++..++...++..
T Consensus 474 v~~~~~~~~~~~~a~v~ 490 (579)
T PLN03102 474 VAMPHPTWGETPCAFVV 490 (579)
T ss_pred EeccCccccceeEEEEE
Confidence 99999877665555443
No 59
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-59 Score=512.69 Aligned_cols=424 Identities=19% Similarity=0.217 Sum_probs=349.6
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
+++.++|+++++++|+++|+.+ ++. .+||+||.++++++|++|.+.|. +|++|+|+
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~ 56 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKE------------NDR-----------VLTYKDWFESVCKVANWLNEKES-KNKTIAIL 56 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEec------------CCc-----------EeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEE
Confidence 3688999999999999999975 333 69999999999999999999984 89999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|++++|+++.++++++.++++.++++++|++......+.... ..++.++
T Consensus 57 ~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~------~~~~~~~-------- 122 (487)
T PRK07638 57 LENRIEFLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEE------GRVIEID-------- 122 (487)
T ss_pred cCCCHHHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhcc------ceEEEeh--------
Confidence 99999999999999999999999999999999999999999999999986554433110 1122111
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEE
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l 321 (649)
.+.+....... .........+++++|+|||||||.||||+++|++++..+......+ .+.++|+++
T Consensus 123 ------------~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~ 188 (487)
T PRK07638 123 ------------EWKRMIEKYLP-TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDF-HMKREDSVL 188 (487)
T ss_pred ------------hhhhhhhhccc-cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CcCCCCEEE
Confidence 11111111111 1111222356789999999999999999999999999988887777 889999999
Q ss_pred EccChHHHHHHHHHHHHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhc
Q 006354 322 AYLPLAHVLELAAESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (649)
Q Consensus 322 ~~~pl~h~~~~~~~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~ 398 (649)
...|++|..++...+.++..|+++++. ++..+.+. ++++++|+++++|+++..+.+...
T Consensus 189 ~~~~l~~~~~l~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~~~~l~~~~~------- 250 (487)
T PRK07638 189 IAGTLVHSLFLYGAISTLYVGQTVHLMRKFIPNQVLDK-----------LETENISVMYTVPTMLESLYKENR------- 250 (487)
T ss_pred EeecchHHHHHHHHHHHHccCcEEEEcCCCCHHHHHHH-----------HHHcCCeEEEeCcHHHHHHHhCcC-------
Confidence 999999998887788899999999984 34444444 999999999999999998875300
Q ss_pred chhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCcccccc
Q 006354 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAY 477 (649)
Q Consensus 399 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~Y 477 (649)
...+.+.++++|+++++++.+++...+ ++.+++.|
T Consensus 251 --------------------------------------------~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~Y 286 (487)
T PRK07638 251 --------------------------------------------VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFY 286 (487)
T ss_pred --------------------------------------------cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEe
Confidence 002455678899999999999999887 78999999
Q ss_pred CcccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC
Q 006354 478 GLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE 556 (649)
Q Consensus 478 G~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~ 556 (649)
|+||++.++...... ....+++|+|+++++++|+| +++.. +++|+.|||+|+|+.++.||+++++.+.+.+ .
T Consensus 287 G~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~g~~---~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~---~ 359 (487)
T PRK07638 287 GASELSFVTALVDEESERRPNSVGRPFHNVQVRICN-EAGEE---VQKGEIGTVYVKSPQFFMGYIIGGVLARELN---A 359 (487)
T ss_pred cCCccCceEEecccccCCCCCCCCcccCCcEEEEEC-CCCCC---CCCCCCeEEEEecccceeeecCCHHHHhhhc---c
Confidence 999998776654432 33557999999999999999 55543 7899999999999999999999998877755 5
Q ss_pred CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhh
Q 006354 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIF 630 (649)
Q Consensus 557 ~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~ 630 (649)
+ |||+|||+|++|+||+++++||.+|+||+ +|++|+|.+||++|.+||+|. +|+|++..++..++.+.++
T Consensus 360 ~--g~~~TGDl~~~d~~g~l~i~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~-~~~v~~~~~~~~g~~~~~~ 429 (487)
T PRK07638 360 D--GWMTVRDVGYEDEEGFIYIVGREKNMILF-GGINIFPEEIESVLHEHPAVD-EIVVIGVPDSYWGEKPVAI 429 (487)
T ss_pred C--CcEecCccEeEcCCCeEEEEecCCCeEEe-CCEEECHHHHHHHHHhCCCee-eEEEEecCchhcCCeeEEE
Confidence 5 89999999999999999999999999998 599999999999999999999 9999999998777655443
No 60
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.9e-59 Score=536.95 Aligned_cols=440 Identities=18% Similarity=0.230 Sum_probs=342.5
Q ss_pred CCCCHHHHHHHHHHhCCC-CcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 006354 80 GASTMAALFEQSCKSHPQ-DRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (649)
Q Consensus 80 ~~~tl~~~~~~~a~~~p~-~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V 158 (649)
...|+.++|+++++++|+ ++|+.. ++ ++++||+||.++++++|++|++. +++||+|
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~------------~~----------~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V 258 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIED------------VN----------FTPDSYRKLLKKTLFVGRILEKY-SVEGERI 258 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEc------------CC----------CCcccHHHHHHHHHHHHHHHHHh-cCCCceE
Confidence 457999999999999998 577753 11 13699999999999999999887 5999999
Q ss_pred EEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHH--HhhccCCCccEEEEecCCC
Q 006354 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLS--AVSSSLKTIKNVIYFENDG 236 (649)
Q Consensus 159 ~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~--~~~~~~~~~~~ii~~~~~~ 236 (649)
+|+++|++++++++|||+++|++++|+++.++++++.+++++++++++|++.+..+... ......+.+..+ .+++..
T Consensus 259 al~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~ 337 (718)
T PRK08043 259 GLMLPNATISAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWV-YLEDLK 337 (718)
T ss_pred EEEcCCcHHHHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEE-Ehhhhh
Confidence 99999999999999999999999999999999999999999999999999877654311 111111222222 222110
Q ss_pred CCccCCCCCCCCCceEeehHH--HH-hcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCC
Q 006354 237 SEKDSGVSGGISNWTVSSFSE--VE-KLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN 313 (649)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~ 313 (649)
. . ..+.+ .. ..............++|+|+|+|||||||.||||++||+++++.+......+ .
T Consensus 338 ~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~-~ 402 (718)
T PRK08043 338 D-D-------------VTTADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA-D 402 (718)
T ss_pred h-h-------------cchhHHHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-C
Confidence 0 0 00100 00 0000001111234679999999999999999999999999999988888777 8
Q ss_pred CCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCc-ccccccchhhccCccccceeecceEEEechHHHHHHHHHHH
Q 006354 314 PGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGST-LTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (649)
Q Consensus 314 ~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~-~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 391 (649)
++++|++++.+|++|.+++.. ++.++..|+++++.+. ... ..+...++++++|+++++|+++..+.....
T Consensus 403 ~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~--------~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~ 474 (718)
T PRK08043 403 FTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHY--------RIVPELVYDRNCTVLFGTSTFLGNYARFAN 474 (718)
T ss_pred CCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccH--------HHHHHHHHhcCCeEEEchHHHHHHhhhhcC
Confidence 899999999999999999865 6788999999988432 111 111223889999999999999876543100
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCC
Q 006354 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA 471 (649)
Q Consensus 392 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~ 471 (649)
....++||.+++||+++++++.+.|++.+|+
T Consensus 475 -------------------------------------------------~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g~ 505 (718)
T PRK08043 475 -------------------------------------------------PYDFARLRYVVAGAEKLQESTKQLWQDKFGL 505 (718)
T ss_pred -------------------------------------------------cccccceEEEEEeCccCCHHHHHHHHHHcCC
Confidence 0011489999999999999999999998999
Q ss_pred ccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccC--CCccc-
Q 006354 472 PIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFN--NPGKT- 548 (649)
Q Consensus 472 ~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~--~~~~t- 548 (649)
++++.||+||++.+++.........+++|+|+||++++|+|.+ + .++.|||+++|++++.|||+ +++.+
T Consensus 506 ~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~~~i~d~~-~-------~~~~Gel~v~g~~v~~GY~~~e~~~~~~ 577 (718)
T PRK08043 506 RILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVP-G-------IEQGGRLQLKGPNIMNGYLRVEKPGVLE 577 (718)
T ss_pred CeecccCcccccceEEecCCcccCCCCCCCcCCCCeeEEecCC-C-------CCCceEEEEecCCccccccCCCCccccc
Confidence 9999999999987766554444466899999999999999832 2 23569999999999999998 45532
Q ss_pred ------hhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCC
Q 006354 549 ------SEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMK 622 (649)
Q Consensus 549 ------~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~ 622 (649)
.+.+. .+ |||+|||+|++|+||+++++||+||+||++ |++|+|.|||+++.+|+.+. +++|++.+++.
T Consensus 578 ~~~~~~~~~~~--~~--gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~-G~~V~p~eIE~~l~~~~~~~-~~avv~~~~~~ 651 (718)
T PRK08043 578 VPTAENARGEM--ER--GWYDTGDIVRFDEQGFVQIQGRAKRFAKIA-GEMVSLEMVEQLALGVSPDK-QHATAIKSDAS 651 (718)
T ss_pred ccccccccccc--cC--CeEecCCEEEEcCCCcEEEEecCCCeeEeC-cEEcCHHHHHHHHHhCCccc-eEEEEEccCCC
Confidence 22221 34 899999999999999999999999999985 99999999999999999998 88899988887
Q ss_pred cccchhh
Q 006354 623 LASSTKI 629 (649)
Q Consensus 623 ~~~~~~~ 629 (649)
.++.+.+
T Consensus 652 ~ge~~v~ 658 (718)
T PRK08043 652 KGEALVL 658 (718)
T ss_pred CCceEEE
Confidence 7765544
No 61
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.2e-59 Score=515.89 Aligned_cols=446 Identities=21% Similarity=0.272 Sum_probs=360.8
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..|+.++|...++++|+++|+.+ +++ .+||+||.++++++|..|++.|+++||+|+|
T Consensus 6 ~~~~~~~~~~~a~~~p~~~a~~~------------~~~-----------~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i 62 (528)
T PRK07470 6 VMNLAHFLRQAARRFPDRIALVW------------GDR-----------SWTWREIDARVDALAAALAARGVRKGDRILV 62 (528)
T ss_pred CCCHHHHHHHHHHHCCCceEEEE------------CCc-----------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 46899999999999999999986 333 5899999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|+++++++++||+++|++++|+++.++.+++.++++.++++.++++.+..+.+..+....+....++.++...
T Consensus 63 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 138 (528)
T PRK07470 63 HSRNCNQMFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGAR---- 138 (528)
T ss_pred EcCCCHHHHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCc----
Confidence 9999999999999999999999999999999999999999999999999887666655544444555566554321
Q ss_pred CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC-CCCCCCcE
Q 006354 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI-PNPGRSDV 319 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~-~~~~~~d~ 319 (649)
...++.++...............++++++|+|||||||.||||+++|+++...+......+ ....++|+
T Consensus 139 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~ 208 (528)
T PRK07470 139 ----------AGLDYEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDA 208 (528)
T ss_pred ----------ccccHHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccE
Confidence 1234555544332222233445678999999999999999999999999976655433322 25678899
Q ss_pred EEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcc
Q 006354 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~ 399 (649)
++..+|++|++++..++ .++.|++.++.....+ + ...++..++++++|++.++|.+++.+......
T Consensus 209 ~l~~~p~~~~~~~~~~~-~~~~g~~~~~~~~~~~-~-----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------- 274 (528)
T PRK07470 209 SLVVAPLSHGAGIHQLC-QVARGAATVLLPSERF-D-----PAEVWALVERHRVTNLFTVPTILKMLVEHPAV------- 274 (528)
T ss_pred EEEeccchhHHHHHHHH-HHhcCceEEEecccCc-C-----HHHHHHHHHhcCCeEEechHHHHHHHHhCcCc-------
Confidence 99999999999987544 5777877766332111 1 11233349999999999999999888653110
Q ss_pred hhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCc
Q 006354 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGL 479 (649)
Q Consensus 400 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~ 479 (649)
+....+++|.+++||++++++..+++.+.++.++++.||+
T Consensus 275 ----------------------------------------~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~ 314 (528)
T PRK07470 275 ----------------------------------------DRYDHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGL 314 (528)
T ss_pred ----------------------------------------CCCCCcceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCC
Confidence 0011248999999999999999988888889999999999
Q ss_pred ccccccccccCC--------CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhh
Q 006354 480 TETCAGSTFSEW--------DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEV 551 (649)
Q Consensus 480 TE~~~~~~~~~~--------~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~ 551 (649)
||+++.++.... .....+++|+|+++++++++| +++.. ++.|+.|||+|+|+.++.||+++++.+++.
T Consensus 315 TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~---~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~ 390 (528)
T PRK07470 315 GEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRE---LPPGETGEICVIGPAVFAGYYNNPEANAKA 390 (528)
T ss_pred cccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCC---CCCCCceEEEEeCCccchhhcCCHHHHHhh
Confidence 999876654322 122347899999999999999 55544 678999999999999999999999999988
Q ss_pred hccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchh
Q 006354 552 YKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTK 628 (649)
Q Consensus 552 f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~ 628 (649)
| .+ +||+|||+|++++||++++.||.||+||+ +|++|+|.+||++|.++|.|. +|+|++.+++..++...
T Consensus 391 ~---~~--~~~~TGDl~~~~~~g~l~~~GR~dd~i~~-~G~~v~~~~IE~~l~~~~~v~-~~~v~~~~~~~~~~~~~ 460 (528)
T PRK07470 391 F---RD--GWFRTGDLGHLDARGFLYITGRASDMYIS-GGSNVYPREIEEKLLTHPAVS-EVAVLGVPDPVWGEVGV 460 (528)
T ss_pred h---cC--CcEecceeEEEccCCeEEEeCCccceEEe-CCEEECHHHHHHHHHhCCCce-EEEEEeccCcccCceeE
Confidence 8 56 89999999999999999999999999997 599999999999999999999 99999998887664443
No 62
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.3e-59 Score=516.60 Aligned_cols=445 Identities=21% Similarity=0.251 Sum_probs=369.9
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
-+++.+.++++++++|+++|+.+ +++ .+||.||.++++++|++|.+.|+++||+|+|
T Consensus 16 ~~n~~~~~~~~a~~~~~~~a~~~------------~~~-----------~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i 72 (542)
T PRK07786 16 RQNWVNQLARHALMQPDAPALRF------------LGN-----------TTTWRELDDRVAALAGALSRRGVGFGDRVLI 72 (542)
T ss_pred ccCHHHHHHHHHHHCCCCeEEEe------------CCC-----------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 36899999999999999999986 333 5999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|+++++++++||+++|++++|+++..+.+++.++++++++++++++......+.......+.++.++.+++...
T Consensus 73 ~~~~~~~~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 149 (542)
T PRK07786 73 LMLNRTEFVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSD--- 149 (542)
T ss_pred ECCCCHHHHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCc---
Confidence 99999999999999999999999999999999999999999999999998877776665555566677776553211
Q ss_pred CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCC-CCCcE
Q 006354 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP-GRSDV 319 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~-~~~d~ 319 (649)
....+++++....... ........+++++++|||||||.||||++||+++.+.+......+ ++ .++++
T Consensus 150 ---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~ 218 (542)
T PRK07786 150 ---------DSVLGYEDLLAEAGPA-HAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTN-GADINSDV 218 (542)
T ss_pred ---------ccccCHHHHhhccCCC-CCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhc-CCCCCCce
Confidence 1234566655433222 123345567899999999999999999999999999888877777 55 67899
Q ss_pred EEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcc
Q 006354 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~ 399 (649)
+++.+|++|.+++..++.++..|+++++.+...+ + +..++..++++++|.++++|+++..+.........
T Consensus 219 ~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~-~-----~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~---- 288 (542)
T PRK07786 219 GFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAF-D-----PGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPR---- 288 (542)
T ss_pred EEEecchHHHHHHHHHHHHHHccCEEEEccCCCc-C-----HHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCcc----
Confidence 9999999999999888889999999988432211 1 12234449999999999999999988763211000
Q ss_pred hhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccccC
Q 006354 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYG 478 (649)
Q Consensus 400 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG 478 (649)
..++|.+++||+++++++.+.+++.+ ++++++.||
T Consensus 289 --------------------------------------------~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG 324 (542)
T PRK07786 289 --------------------------------------------DLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFG 324 (542)
T ss_pred --------------------------------------------CcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeec
Confidence 02699999999999999999999887 789999999
Q ss_pred cccccccccccCCC--CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC
Q 006354 479 LTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE 556 (649)
Q Consensus 479 ~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~ 556 (649)
+||++.+.+..... ....+++|+|++++.++|+| +++.. ++.|+.|||+++|+.++.||+++++.|+..| .
T Consensus 325 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~---~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f---~ 397 (542)
T PRK07786 325 QTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMND---VPVGEVGEIVYRAPTLMSGYWNNPEATAEAF---A 397 (542)
T ss_pred ccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCC---CcCCCceEEEEEChhhhhhhcCCHHHHHHHh---h
Confidence 99998766543332 23457899999999999999 55543 6789999999999999999999999999998 5
Q ss_pred CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccch
Q 006354 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASST 627 (649)
Q Consensus 557 ~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~ 627 (649)
+ +||+|||++++++||.++++||.||+||+ +|++|+|.+||++|.+||.|. +|+|++..+...++..
T Consensus 398 ~--~~~~TGDl~~~~~~g~~~i~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~-~~~v~~~~~~~~~~~~ 464 (542)
T PRK07786 398 G--GWFHSGDLVRQDEEGYVWVVDRKKDMIIS-GGENIYCAEVENVLASHPDIV-EVAVIGRADEKWGEVP 464 (542)
T ss_pred C--CcccccceEEEcCCceEEEEecccceEEe-CCEEECHHHHHHHHHhCCCcc-EEEEEeccCcccCceE
Confidence 5 89999999999999999999999999997 599999999999999999999 9999998876655433
No 63
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=6.7e-59 Score=517.81 Aligned_cols=448 Identities=20% Similarity=0.252 Sum_probs=357.0
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 006354 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (649)
Q Consensus 79 ~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V 158 (649)
+...|+.++|.++++++|+++|+.+.. +|+ .+||+||.++++++|++|++.|+++||+|
T Consensus 25 ~~~~~~~~~l~~~a~~~p~~~a~~~~~----------~~~-----------~~Ty~~l~~~~~~la~~L~~~g~~~g~~V 83 (546)
T PLN02330 25 PDKLTLPDFVLQDAELYADKVAFVEAV----------TGK-----------AVTYGEVVRDTRRFAKALRSLGLRKGQVV 83 (546)
T ss_pred CCCCcHHHHHhhhhhcCCCccEEEecC----------CCC-----------cccHHHHHHHHHHHHHHHHHhCCCCCCEE
Confidence 345789999999999999999997521 233 69999999999999999999999999999
Q ss_pred EEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCC
Q 006354 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSE 238 (649)
Q Consensus 159 ~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~ 238 (649)
+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++......+.... +. ++.++....
T Consensus 84 ~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~-----~~-~i~~~~~~~- 156 (546)
T PLN02330 84 VVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLG-----LP-VIVLGEEKI- 156 (546)
T ss_pred EEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcC-----Cc-EEEecCCCC-
Confidence 99999999999999999999999999999999999999999999999999998777665431 12 333332110
Q ss_pred ccCCCCCCCCCceEeehHHHHhcCCCCC--CCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC-CCCC
Q 006354 239 KDSGVSGGISNWTVSSFSEVEKLGKRSP--VDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI-PNPG 315 (649)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~-~~~~ 315 (649)
.....|.++........ .......++++++|+|||||||.||||++||++++..+....... ....
T Consensus 157 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~ 225 (546)
T PLN02330 157 -----------EGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMI 225 (546)
T ss_pred -----------CCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCcccc
Confidence 11234555554332211 112334578999999999999999999999999987765432222 1223
Q ss_pred CCcEEEEccChHHHHHHHH-HHHHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHH
Q 006354 316 RSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (649)
Q Consensus 316 ~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 391 (649)
..++++..+|++|.+++.. ++.++..|+++++. ++..+.+. ++++++|++.++|+++..+.....
T Consensus 226 ~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------i~~~~vt~~~~~P~~~~~l~~~~~ 294 (546)
T PLN02330 226 GQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNA-----------LITQEVSFAPIVPPIILNLVKNPI 294 (546)
T ss_pred CceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHH-----------HHHcCCeeeecCCHHHHHHHhCcc
Confidence 4568999999999999865 56789999999884 33444444 999999999999999998865311
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-C
Q 006354 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-G 470 (649)
Q Consensus 392 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~ 470 (649)
..... + ...++|.+++||+++++++.+++.+.+ +
T Consensus 295 ~~~~~----------------~-----------------------------~~~~l~~i~~~g~~l~~~~~~~~~~~~~~ 329 (546)
T PLN02330 295 VEEFD----------------L-----------------------------SKLKLQAIMTAAAPLAPELLTAFEAKFPG 329 (546)
T ss_pred ccccc----------------c-----------------------------chheeeeEEEcCCcCCHHHHHHHHHHcCC
Confidence 00000 0 001589999999999999999999888 8
Q ss_pred CccccccCcccccccccccCCC-----CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCC
Q 006354 471 APIGQAYGLTETCAGSTFSEWD-----DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNP 545 (649)
Q Consensus 471 ~~l~~~YG~TE~~~~~~~~~~~-----~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~ 545 (649)
+++++.||+||++.+....... ....+++|.|+||++++|+|++++.. +++|+.|||+|+|++++.||++++
T Consensus 330 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~---~p~g~~Gel~v~g~~~~~gy~~~~ 406 (546)
T PLN02330 330 VQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRS---LPKNTPGELCVRSQCVMQGYYNNK 406 (546)
T ss_pred CeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCcc---CCCCCceEEEEecchhhhhhccCc
Confidence 9999999999987654332111 12346899999999999999665544 688999999999999999999999
Q ss_pred ccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCccc
Q 006354 546 GKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLAS 625 (649)
Q Consensus 546 ~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~ 625 (649)
+.+++.|. .+ |||+|||+|++++||.++++||.+|+||++ |++|+|.+||++|.++|.|. +++|++.+++..++
T Consensus 407 ~~~~~~~~--~~--g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~-G~~v~~~~iE~~l~~~~~v~-~~~v~~~~~~~~g~ 480 (546)
T PLN02330 407 EETDRTID--ED--GWLHTGDIGYIDDDGDIFIVDRIKELIKYK-GFQVAPAELEAILLTHPSVE-DAAVVPLPDEEAGE 480 (546)
T ss_pred cchhhhcc--CC--CceecccEEEEeCCCcEEEEechHHhhhcC-CEEECHHHHHHHHHhCCchh-eEEEEeccccccCc
Confidence 99998875 45 899999999999999999999999999985 99999999999999999999 99999998887776
Q ss_pred chhhh
Q 006354 626 STKIF 630 (649)
Q Consensus 626 ~~~~~ 630 (649)
...++
T Consensus 481 ~~~a~ 485 (546)
T PLN02330 481 IPAAC 485 (546)
T ss_pred eeEEE
Confidence 54443
No 64
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=2.6e-58 Score=523.44 Aligned_cols=465 Identities=17% Similarity=0.130 Sum_probs=346.3
Q ss_pred HHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccC
Q 006354 85 AALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAET 164 (649)
Q Consensus 85 ~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~ 164 (649)
..+|+++++++|+++|+++.+ ++. ..+..+.+||+||.++++++|++|+++|+++||+|+++++|
T Consensus 178 ~~~l~~~~~~~pd~~Ai~~~~----------e~~-----~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn 242 (728)
T PLN03052 178 ECCLTPKPSKTDDSIAIIWRD----------EGS-----DDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPM 242 (728)
T ss_pred HHHHHHHhccCCCCeEEEEEC----------CCC-----CCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCC
Confidence 456766667799999999853 110 01234679999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhH------HHHHHhhccCCCccEEEEecCCCCC
Q 006354 165 CVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL------KKLSAVSSSLKTIKNVIYFENDGSE 238 (649)
Q Consensus 165 ~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~l~~~~~~~~~~~~ii~~~~~~~~ 238 (649)
++++++++|||+++|++++|++|.++++++.+++++++++++|+++... +....+..... ..++++......
T Consensus 243 ~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~--~~~iv~~~~~~~ 320 (728)
T PLN03052 243 NVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKA--PKAIVLPADGKS 320 (728)
T ss_pred CHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcC--CcEEEEeCCCCc
Confidence 9999999999999999999999999999999999999999999987532 12222221111 123333321110
Q ss_pred ccCCCCCCCCCceEeehHHHHhcCCC----CCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCC
Q 006354 239 KDSGVSGGISNWTVSSFSEVEKLGKR----SPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP 314 (649)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~ 314 (649)
.. .. . .....+|+++...... ...++....++++++|+|||||||.||||+++|++++..+......+ .+
T Consensus 321 ~~--~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~-~l 394 (728)
T PLN03052 321 VR--VK-L--REGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL-DI 394 (728)
T ss_pred cc--cc-c--ccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc-CC
Confidence 00 00 0 0012456666543211 11112223568999999999999999999999999887776666666 88
Q ss_pred CCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHH
Q 006354 315 GRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKV 394 (649)
Q Consensus 315 ~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~ 394 (649)
+++|++++++|++|+++.+.++.+|..|+++++.+..... ..+++.++++++|++.++|++++.+.+....
T Consensus 395 ~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~-------~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~-- 465 (728)
T PLN03052 395 RKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLG-------RGFAKFVQDAKVTMLGTVPSIVKTWKNTNCM-- 465 (728)
T ss_pred CCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCC-------ChHHHHHHHHCCCEEEECHHHHHHHHhcCCc--
Confidence 8999999999999999987778899999999984321110 1123339999999999999999987652100
Q ss_pred HhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcC-Ccc
Q 006354 395 EEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG-API 473 (649)
Q Consensus 395 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~-~~l 473 (649)
+..+.++||.+++||++++++...++...++ .++
T Consensus 466 ---------------------------------------------~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i 500 (728)
T PLN03052 466 ---------------------------------------------AGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPI 500 (728)
T ss_pred ---------------------------------------------ccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCe
Confidence 0111248999999999999999888777665 579
Q ss_pred ccccCccccccccccc-CCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCC--ccEEEEccc--cccccccCCCccc
Q 006354 474 GQAYGLTETCAGSTFS-EWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMP--RGEIVVGGF--NVTAGYFNNPGKT 548 (649)
Q Consensus 474 ~~~YG~TE~~~~~~~~-~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~--~GEl~v~g~--~v~~gY~~~~~~t 548 (649)
.+.||+||+++..... +......+++|.|++|++++|+| ++++. ++.|+ .|||+++++ ....+|+++. .+
T Consensus 501 ~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d-~~g~~---v~~g~~~~GEL~v~~~~~~~~~~~~~~~-~~ 575 (728)
T PLN03052 501 IEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILD-DSGNP---YPDDAPCTGELALFPLMFGASSTLLNAD-HY 575 (728)
T ss_pred EeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEEC-CCCCC---CCCCCCceEEEEEeCCCCCCCccccCch-hh
Confidence 9999999987654332 22233568899999999999999 66654 56664 699999865 3345677764 33
Q ss_pred hhhhccCC--CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhc-cCcccccceEEEecCCCCcc-
Q 006354 549 SEVYKVDE--RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTT-VLPLLFHHIRLWRNGPMKLA- 624 (649)
Q Consensus 549 ~~~f~~~~--~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~-~~p~V~~~~~V~g~~~~~~~- 624 (649)
..-|...+ ++++||+|||+|++|+||+++|+||.||+||+ +|+||+|.|||++|. .||.|. +|+|+|.+++..|
T Consensus 576 ~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~-~G~rI~~~EIE~~l~~~~p~V~-eaaVvg~~d~~~g~ 653 (728)
T PLN03052 576 KVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNL-GGIKVSSVEIERVCNAADESVL-ETAAIGVPPPGGGP 653 (728)
T ss_pred hhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEee-CCEEeCHHHHHHHHHhcCCCcc-eEEEEeeecCCCCc
Confidence 33342212 23459999999999999999999999999998 599999999999994 899999 9999999988766
Q ss_pred cchhhhhhh
Q 006354 625 SSTKIFQSC 633 (649)
Q Consensus 625 ~~~~~~~~~ 633 (649)
+.+.+++.+
T Consensus 654 e~~~afVvl 662 (728)
T PLN03052 654 EQLVIAAVL 662 (728)
T ss_pred EEEEEEEEE
Confidence 555555443
No 65
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=6.9e-58 Score=535.12 Aligned_cols=474 Identities=19% Similarity=0.269 Sum_probs=384.7
Q ss_pred cCCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCC
Q 006354 76 VPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVD 155 (649)
Q Consensus 76 ~~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~g 155 (649)
.+++...|+.++|++.++++|+++|+..+. + .++++++||+|+.++++++|++|+++|+++|
T Consensus 421 ~~~~~~~Tl~dll~~~a~~~pd~~al~~~~----------~--------~g~~~~lTY~El~~~V~~lAa~L~~lGV~~G 482 (1452)
T PTZ00297 421 NPLAGVRSLGEMWERSVTRHSTFRCLGQTS----------E--------SGESEWLTYGTVDARARELGSGLLALGVRPG 482 (1452)
T ss_pred CCcccCCCHHHHHHHHHHHCCCCeEEEEec----------c--------CCCceEEEHHHHHHHHHHHHHHHHHcCCCCC
Confidence 344666799999999999999999997431 0 1345689999999999999999999999999
Q ss_pred CEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCC
Q 006354 156 TRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFEND 235 (649)
Q Consensus 156 d~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~ 235 (649)
|+|+|+++|+++|+++.+||+++|+++||+++ +.+++.+++++++++++|++.+..+++.++.. +.++.||++++.
T Consensus 483 DrVaIls~N~~Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~--~~Lr~IIv~d~~ 558 (1452)
T PTZ00297 483 DVIGVDCEASRNIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS--RKLETVVYTHSF 558 (1452)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc--cCCcEEEEECCC
Confidence 99999999999999999999999999999985 46799999999999999999888887766543 378899998642
Q ss_pred CCCccCCCCCCCCCceEeehHHHHhcCCCCCCC-CCCCCCCCeEEEEe---ecCCCCCcceEEechHHHHHHHHHHHhhC
Q 006354 236 GSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVD-PSLPSQNGVAVIMY---TSGSTGLPKGVMITHGNIVATAAAIKTLI 311 (649)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~i~~---TSGSTG~PKgV~~th~~l~~~~~~~~~~~ 311 (649)
........ ....++..++|+++...+.....+ ....+++|++.|+| ||||||.||||++||+|+++.+.......
T Consensus 559 ~~~~~~~~-~~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~ 637 (1452)
T PTZ00297 559 YDEDDHAV-ARDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTG 637 (1452)
T ss_pred cccccccc-cccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhc
Confidence 11000000 001234578899998876432221 23447889999996 99999999999999999999998876532
Q ss_pred --CCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHH
Q 006354 312 --PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (649)
Q Consensus 312 --~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 389 (649)
+...++|++++++|++|+++....+.+++.|++++++++..+.+. +++++||+++++|++|+.+.+.
T Consensus 638 ~~~~~~~~D~~Ls~LPLaHI~er~~~~~~l~~G~~I~~~d~~~lled-----------L~~~rPTv~~~VPrv~ekI~~~ 706 (1452)
T PTZ00297 638 VLPSSFKKHLMVHFTPFAMLFNRVFVLGLFAHGSAVATVDAAHLQRA-----------FVKFQPTILVAAPSLFSTSRLQ 706 (1452)
T ss_pred cccCCCCCCEEEEechHHHHHHHHHHHHHHHcCCEEEeCCHHHHHHH-----------HHHHCCEEEEecHHHHHHHHHH
Confidence 245678999999999999998777888999999988887777777 9999999999999999999999
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCC--CCCHHHHHHHHh
Q 006354 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGA--PLSADSQRFINI 467 (649)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~--~l~~~~~~~~~~ 467 (649)
+.++....+.+++++|++|.+.+.+.+.. ....++++|+++|+++|+.+|+++|.+++||+ +++..+..
T Consensus 707 i~~~~~~~~~~~~~lf~~A~~~k~~~~~~-----g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~---- 777 (1452)
T PTZ00297 707 LSRANERYSAVYSWLFERAFQLRSRLINI-----HRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE---- 777 (1452)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHhc-----CCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC----
Confidence 98888888889999999999987765542 13456699999999999999999999999984 55544333
Q ss_pred hcCCccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCcc
Q 006354 468 CMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGK 547 (649)
Q Consensus 468 ~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~ 547 (649)
+++++.+||+||+. +.+...+.. ..|+|+|+++++|.+.++.+. .+..|||+++ |++||+.
T Consensus 778 --~i~i~~g~glTE~~---~~~~~~~~~--~~G~PlpgvEvKI~~~~E~~~-----~~~~GEIlvr-------~~kdpe~ 838 (1452)
T PTZ00297 778 --HISVCYVPCLREVF---FLPSEGVFC--VDGTPAPSLQVDLEPFDEPSD-----GAGIGQLVLA-------KKGEPRR 838 (1452)
T ss_pred --CceEEEecceEEee---eecCCCCcc--cCCeecCceEEEEcccccccC-----CCCCCeEEEE-------ECCChHH
Confidence 57788899999953 333333333 349999999999998555432 1247999995 4689999
Q ss_pred chhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccch
Q 006354 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASST 627 (649)
Q Consensus 548 t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~ 627 (649)
|++.+ + ||+ +||+|+|+||+||+||+++|++|+|+.||+.+.++|.|. +++|+|++.+.....+
T Consensus 839 T~e~~----~--gW~---------~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~-qi~V~Gd~~k~lvALV 902 (1452)
T PTZ00297 839 TLPIA----A--QWK---------RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVN-DIFLYADPSRPIIAIV 902 (1452)
T ss_pred HHHhh----C--cCc---------cCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCcc-EEEEEecCCCceEEEE
Confidence 99853 3 675 699999999999999999999999999999999999999 9999999888766544
No 66
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.5e-58 Score=513.72 Aligned_cols=447 Identities=21% Similarity=0.298 Sum_probs=364.8
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..|+.++|+++++++|+++|+... +|+ .+||+||.++++++|++|++.|+++||+|++
T Consensus 22 ~~~l~~~~~~~~~~~pd~~a~~~~-----------~~~-----------~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i 79 (547)
T PRK06087 22 DASLADYWQQTARAMPDKIAVVDN-----------HGA-----------SYTYSALDHAASRLANWLLAKGIEPGDRVAF 79 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEcC-----------CCC-----------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 368999999999999999999752 333 6999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch-----hHHHHHHhhccCCCccEEEEecCC
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK-----QLKKLSAVSSSLKTIKNVIYFEND 235 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~l~~~~~~~~~~~~ii~~~~~ 235 (649)
+++|+++++++++||+++|++++|++|.++.+++.++++.+++++++++.. ..+.+..+....+.++.++.++..
T Consensus 80 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (547)
T PRK06087 80 QLPGWCEFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKL 159 (547)
T ss_pred ECCCCHHHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCc
Confidence 999999999999999999999999999999999999999999999999753 233444444455566666665543
Q ss_pred CCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCC
Q 006354 236 GSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPG 315 (649)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~ 315 (649)
... ....++.++....... .......++++++|+|||||||.||+|++||++++.........+ .+.
T Consensus 160 ~~~-----------~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~ 226 (547)
T PRK06087 160 APA-----------TSSLSLSQIIADYEPL-TTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL-NLT 226 (547)
T ss_pred CCC-----------cCccCHHHHhccCCcc-cCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCC
Confidence 211 1122444444332211 122345678999999999999999999999999998888877777 889
Q ss_pred CCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCc---ccccccchhhccCccccceeecceEEEechHHHHHHHHHHH
Q 006354 316 RSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGST---LTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (649)
Q Consensus 316 ~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~---~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 391 (649)
++|++++.+|++|.++++. ++.++..|+++++... ..+.+. ++++++|+++.+|..+..++....
T Consensus 227 ~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~~~~~~~~l~~~~ 295 (547)
T PRK06087 227 WQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLAL-----------LEQQRCTCMLGATPFIYDLLNLLE 295 (547)
T ss_pred CCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHH-----------HHHcCCCEEeccHHHHHHHHhccc
Confidence 9999999999999999765 6678899999998443 333333 899999999988877766654321
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCC
Q 006354 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA 471 (649)
Q Consensus 392 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~ 471 (649)
.. ....+++|.+++||+++++++.+.+... ++
T Consensus 296 ~~-----------------------------------------------~~~~~~lr~i~~gG~~~~~~~~~~~~~~-~~ 327 (547)
T PRK06087 296 KQ-----------------------------------------------PADLSALRFFLCGGTTIPKKVARECQQR-GI 327 (547)
T ss_pred cC-----------------------------------------------CCCCCCeEEEEEcCCCCCHHHHHHHHHc-CC
Confidence 10 0012489999999999999998888775 99
Q ss_pred ccccccCcccccccccccCCC--CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccch
Q 006354 472 PIGQAYGLTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTS 549 (649)
Q Consensus 472 ~l~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~ 549 (649)
++++.||+||++.+....... ....+++|.|++++.++++| +++.. ++.|+.|||+|+|++++.||+++++.+.
T Consensus 328 ~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~---~~~g~~Gel~v~g~~~~~gy~~~~~~~~ 403 (547)
T PRK06087 328 KLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKT---LPPGCEGEEASRGPNVFMGYLDEPELTA 403 (547)
T ss_pred cEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCC---CcCCCcceEEEecccccccccCCHHHHH
Confidence 999999999998776544322 12346789999999999999 55543 6789999999999999999999999999
Q ss_pred hhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhh
Q 006354 550 EVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKI 629 (649)
Q Consensus 550 ~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~ 629 (649)
+.|. .+ +||+|||+++++++|+++++||.||+|++ +|++|+|.+||++|.++|+|. +++|++..++..|+.+.+
T Consensus 404 ~~~~--~~--g~~~TGDl~~~~~~g~l~i~GR~~d~i~~-~G~~v~p~~iE~~l~~~~~v~-~~~v~~~~~~~~g~~~~~ 477 (547)
T PRK06087 404 RALD--EE--GWYYSGDLCRMDEAGYIKITGRKKDIIVR-GGENISSREVEDILLQHPKIH-DACVVAMPDERLGERSCA 477 (547)
T ss_pred HHhC--CC--CCcCcCceEEECCCCCEEEEecchhhhhc-CCEEECHHHHHHHHHhCCCee-EEEEEecCCCCcCceEEE
Confidence 9885 45 89999999999999999999999999996 699999999999999999999 999999988877765544
Q ss_pred hh
Q 006354 630 FQ 631 (649)
Q Consensus 630 ~~ 631 (649)
+.
T Consensus 478 ~v 479 (547)
T PRK06087 478 YV 479 (547)
T ss_pred EE
Confidence 43
No 67
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-58 Score=515.50 Aligned_cols=463 Identities=18% Similarity=0.286 Sum_probs=368.8
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHH-CCCCCCCEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAI 160 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~-~Gv~~gd~V~i 160 (649)
.|+.++|++++..+|+++|+.+ ++. ..+.+||+||.+++.++|++|++ .|+++||+|++
T Consensus 10 ~~~~~~l~~~a~~~~~~~a~~~------------~~~--------~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~ 69 (576)
T PRK05620 10 LSLTRILEYGSTVHGDTTVTTW------------GGA--------EQEQTTFAAIGARAAALAHALHDELGITGDQRVGS 69 (576)
T ss_pred CcHHHHHHHHHHhCCCceEEEE------------cCC--------ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 5899999999999999999986 221 12579999999999999999986 79999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|+++++++++||+++|++++|++|.++.+++.++++.++++++|++....+.+.+.....+..+.++.++......
T Consensus 70 ~~~n~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 148 (576)
T PRK05620 70 MMYNCAEHLEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADS- 148 (576)
T ss_pred EeCCCHHHHHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCccccc-
Confidence 9999999999999999999999999999999999999999999999999988888777766666777777665332111
Q ss_pred CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHH--HhhCCCCCCCc
Q 006354 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAI--KTLIPNPGRSD 318 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~--~~~~~~~~~~d 318 (649)
.....+......+|.++...... ........++++++++|||||||.||||+++|+++....... ...+ .+..++
T Consensus 149 -~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~-~~~~~~ 225 (576)
T PRK05620 149 -AAAHMPEGIKVYSYEALLDGRST-VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSL-AVTHGE 225 (576)
T ss_pred -chhccccccccccHHHHhhcCCC-cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhc-CCCCCC
Confidence 00111223445678888764322 222234567899999999999999999999999987655443 2345 778899
Q ss_pred EEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhc
Q 006354 319 VYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (649)
Q Consensus 319 ~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~ 398 (649)
++++.+|++|.+++...+.++..|+++++..+.. + ...++..++++++|+++++|.++..+.........
T Consensus 226 ~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~--~-----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~--- 295 (576)
T PRK05620 226 SFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDL--S-----APTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPP--- 295 (576)
T ss_pred eEEEeCChHHhhhhHHHHHHHhcCceEEecCCCC--C-----HHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCc---
Confidence 9999999999999988888999999998843211 1 11233339999999999999999887654211000
Q ss_pred chhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccC
Q 006354 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (649)
Q Consensus 399 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG 478 (649)
...++|.+++||+++++++.+.|++.+++++++.||
T Consensus 296 --------------------------------------------~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG 331 (576)
T PRK05620 296 --------------------------------------------ERMSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWG 331 (576)
T ss_pred --------------------------------------------ccCceeEEEEcCCCCCHHHHHHHHHHhCCceeeecc
Confidence 003799999999999999999999888999999999
Q ss_pred cccccccccccCCCC--------CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccc--
Q 006354 479 LTETCAGSTFSEWDD--------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKT-- 548 (649)
Q Consensus 479 ~TE~~~~~~~~~~~~--------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t-- 548 (649)
+||++..++.....+ ....++|++.++++++++| + +.... .+.+..|||+++|+.++.||+++++.|
T Consensus 332 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~-~~~~~~Gel~v~g~~~~~gY~~~~~~t~~ 408 (576)
T PRK05620 332 MTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVME-STDRNEGEIQVRGNWVTASYYHSPTEEGG 408 (576)
T ss_pred ccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-Ccccc-CCCCCceEEEEEcCcccccccCCcccccc
Confidence 999987765433211 1124789999999999998 3 43321 345678999999999999999999988
Q ss_pred --hhhhccC----------CCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEE
Q 006354 549 --SEVYKVD----------ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLW 616 (649)
Q Consensus 549 --~~~f~~~----------~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~ 616 (649)
...|..+ .+ |||+|||+|++++||.++++||.||+||+ +|++|+|.+||++|.+||.|. +|+|+
T Consensus 409 ~~~~~f~~~~~~~~~~~~~~~--g~~~TGD~~~~~~dg~l~~~GR~~d~i~~-~G~~i~~~eIE~~l~~~p~v~-~~~vv 484 (576)
T PRK05620 409 GAASTFRGEDVEDANDRFTAD--GWLRTGDVGSVTRDGFLTIHDRARDVIRS-GGEWIYSAQLENYIMAAPEVV-ECAVI 484 (576)
T ss_pred ccccccccccchhhhcccccC--CcEecCceEEEcCCceEEEEechhhhhhc-CCEEEcHHHHHHHHhcCCCce-EEEEE
Confidence 3333211 23 89999999999999999999999999996 599999999999999999999 99999
Q ss_pred ecCCCCcccchhh
Q 006354 617 RNGPMKLASSTKI 629 (649)
Q Consensus 617 g~~~~~~~~~~~~ 629 (649)
+.++...|+...+
T Consensus 485 ~~~~~~~g~~~~a 497 (576)
T PRK05620 485 GYPDDKWGERPLA 497 (576)
T ss_pred eccCCCcCceeEE
Confidence 9998876655444
No 68
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.1e-58 Score=515.86 Aligned_cols=447 Identities=24% Similarity=0.329 Sum_probs=362.9
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..++.++|++.++++|+++|+.+. ++. +.+||+||.++++++|+.|.+.|+++||+|++
T Consensus 15 ~~~l~~~l~~~~~~~~~~~ai~~~-----------~~~----------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i 73 (559)
T PRK08315 15 EQTIGQLLDRTAARYPDREALVYR-----------DQG----------LRWTYREFNEEVDALAKGLLALGIEKGDRVGI 73 (559)
T ss_pred hccHHHHHHHHHHHCCCCeEEEEc-----------CCC----------eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 368999999999999999999874 222 36999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhH-----HHHHHhhcc-------------
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVSSS------------- 222 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~l~~~~~~------------- 222 (649)
+++|++++++++|||+++|++++|++|.++.+++..+++.++++++|++.+.. ..+.+....
T Consensus 74 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (559)
T PRK08315 74 WAPNVPEWVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSAR 153 (559)
T ss_pred ECCCChHHHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhccccccccccc
Confidence 99999999999999999999999999999999999999999999999987542 122221111
Q ss_pred CCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCC-----CCCCCCCCCCCeEEEEeecCCCCCcceEEech
Q 006354 223 LKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRS-----PVDPSLPSQNGVAVIMYTSGSTGLPKGVMITH 297 (649)
Q Consensus 223 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th 297 (649)
.+..+.++.++... ......++++....... ........++++++++|||||||.||+|.+||
T Consensus 154 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~ 221 (559)
T PRK08315 154 LPELRRVIFLGDEK------------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTH 221 (559)
T ss_pred CCCceeEEeecccC------------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeH
Confidence 12334444433221 11234455554332111 11123345788999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEe----CCcccccccchhhccCccccceeec
Q 006354 298 GNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGY----GSTLTMTDTSSKIKKGTKGDVSVLK 372 (649)
Q Consensus 298 ~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~----~~~~~l~~~~~~~~~~~~~~i~~~~ 372 (649)
++++..+......+ .+.++|+++..+|++|.+++.. ++.++..|+++++ .++..+++. +++++
T Consensus 222 ~~l~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~-----------l~~~~ 289 (559)
T PRK08315 222 RNILNNGYFIGEAM-KLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAA-----------VEEER 289 (559)
T ss_pred HHHHHHHHHHHHhc-CCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHH-----------HHHcC
Confidence 99999988888888 8999999999999999999865 6778999999985 344444444 99999
Q ss_pred ceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEe
Q 006354 373 PTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMIC 452 (649)
Q Consensus 373 ~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~ 452 (649)
+|+++++|.++..+....... ....++||.+++
T Consensus 290 ~t~~~~~P~~~~~~~~~~~~~-----------------------------------------------~~~~~~lr~~~~ 322 (559)
T PRK08315 290 CTALYGVPTMFIAELDHPDFA-----------------------------------------------RFDLSSLRTGIM 322 (559)
T ss_pred CeEEecchHHHHHHHhCcccC-----------------------------------------------CCCchhhheeEe
Confidence 999999999998776421100 001147999999
Q ss_pred cCCCCCHHHHHHHHhhcCC-ccccccCcccccccccccCCCC---CCCCccCCCcccceEEEEecCCCCcccCCCCCCcc
Q 006354 453 GGAPLSADSQRFINICMGA-PIGQAYGLTETCAGSTFSEWDD---PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRG 528 (649)
Q Consensus 453 gG~~l~~~~~~~~~~~~~~-~l~~~YG~TE~~~~~~~~~~~~---~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~G 528 (649)
||+++++++.+.+.+.++. ++++.||+||++.+++...... ....++|+|+||++++|+|++++.. |+.|+.|
T Consensus 323 ~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~---~~~g~~G 399 (559)
T PRK08315 323 AGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGET---VPRGEQG 399 (559)
T ss_pred cCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCc---CCCCCce
Confidence 9999999999999888865 4999999999987766544332 3468999999999999999665654 7899999
Q ss_pred EEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcc
Q 006354 529 EIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPL 608 (649)
Q Consensus 529 El~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~ 608 (649)
||+|+|++++.||+++|+.+++.|. .+ +||+|||+|++++||.++++||.||+||+ +|++|+|.+||++|.++|+
T Consensus 400 El~v~g~~~~~gy~~~~~~~~~~~~--~~--~~~~TGD~~~~~~dg~~~~~GR~d~~i~~-~G~~v~~~eIE~~l~~~~~ 474 (559)
T PRK08315 400 ELCTRGYSVMKGYWNDPEKTAEAID--AD--GWMHTGDLAVMDEEGYVNIVGRIKDMIIR-GGENIYPREIEEFLYTHPK 474 (559)
T ss_pred EEEEECchhhhhhcCChhHHhhcCC--CC--CCEEccceEEEcCCceEEEEeeccceEEE-CCEEEcHHHHHHHHHhCCC
Confidence 9999999999999999999998885 45 89999999999999999999999999997 5999999999999999999
Q ss_pred cccceEEEecCCCCcccchh
Q 006354 609 LFHHIRLWRNGPMKLASSTK 628 (649)
Q Consensus 609 V~~~~~V~g~~~~~~~~~~~ 628 (649)
|. +++|++..++..++.+.
T Consensus 475 v~-~~~v~~~~~~~~~~~~~ 493 (559)
T PRK08315 475 IQ-DVQVVGVPDEKYGEEVC 493 (559)
T ss_pred ce-EEEEEecCCCCCCeEEE
Confidence 99 99999998876554443
No 69
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-58 Score=517.32 Aligned_cols=458 Identities=22% Similarity=0.298 Sum_probs=365.1
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.++|+++++++|+++|+.+ +++ .+||+||.++++++|++|.+.|+++||+|+++
T Consensus 32 ~~l~~~~~~~~~~~p~~~a~~~------------~~~-----------~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~ 88 (573)
T PRK05605 32 TTLVDLYDNAVARFGDRPALDF------------FGA-----------TTTYAELGKQVRRAAAGLRALGVRPGDRVAIV 88 (573)
T ss_pred CCHHHHHHHHHHHCCCCeEEEe------------CCC-----------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 5899999999999999999987 443 58999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc-
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD- 240 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~- 240 (649)
++|+++++++++||+++|++++|++|.++.+++.+++++++++++|+++.....+..+.... .++.++.++.......
T Consensus 89 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 167 (573)
T PRK05605 89 LPNCPQHIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTT-PLETIVSVNMIAAMPLL 167 (573)
T ss_pred CCCCHHHHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhcc-ccceeEeeecccccccc
Confidence 99999999999999999999999999999999999999999999999988776665544322 2344444432110000
Q ss_pred -C--------CCC-----CCCCCceEeehHHHHhcCCCCC---CCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHH
Q 006354 241 -S--------GVS-----GGISNWTVSSFSEVEKLGKRSP---VDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVAT 303 (649)
Q Consensus 241 -~--------~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~ 303 (649)
. .+. .........+|.++........ .......++++++++|||||||.||+|++||++++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~ 247 (573)
T PRK05605 168 QRLALRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFAN 247 (573)
T ss_pred cccccccccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHH
Confidence 0 000 0001123345666554322110 1223456789999999999999999999999999888
Q ss_pred HHHHHhhCCCC-CCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCC---cccccccchhhccCccccceeecceEEEe
Q 006354 304 AAAIKTLIPNP-GRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAA 378 (649)
Q Consensus 304 ~~~~~~~~~~~-~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~---~~~l~~~~~~~~~~~~~~i~~~~~t~l~~ 378 (649)
+......+..+ ..++++++.+|++|.+++.. ++.++..|+++++.+ +..+.+. ++++++|++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------l~~~~~t~~~~ 316 (573)
T PRK05605 248 AAQGKAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDA-----------MKKHPPTWLPG 316 (573)
T ss_pred HHHHHhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHH-----------HHHhCCEEEEc
Confidence 76655443222 34789999999999999765 566789999998843 3333333 89999999999
Q ss_pred chHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCC
Q 006354 379 VPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLS 458 (649)
Q Consensus 379 ~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~ 458 (649)
+|.+++.+.+...... ...++||.+++||++++
T Consensus 317 ~P~~~~~l~~~~~~~~-----------------------------------------------~~~~~lr~i~~gg~~l~ 349 (573)
T PRK05605 317 VPPLYEKIAEAAEERG-----------------------------------------------VDLSGVRNAFSGAMALP 349 (573)
T ss_pred hHHHHHHHHhCccccC-----------------------------------------------CCchhccEEEECCCcCC
Confidence 9999999876422100 01137999999999999
Q ss_pred HHHHHHHHhhcCCccccccCcccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccc
Q 006354 459 ADSQRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNV 537 (649)
Q Consensus 459 ~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v 537 (649)
+++.+.|.+.+++++++.||+||+++++...... ....+++|+|+|+++++|+|+++.+. .++.|+.|||+|+|+.+
T Consensus 350 ~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~--~~~~g~~Gel~v~~~~~ 427 (573)
T PRK05605 350 VSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDE--TMPDGEEGELLVRGPQV 427 (573)
T ss_pred HHHHHHHHHHhCCCeecccccchhchhhhcCCcccCCcCCccccCCCCCEEEEEcCCCCCc--cCCCCCeeEEEEecCch
Confidence 9999999988899999999999998877655443 23457999999999999999655222 26789999999999999
Q ss_pred cccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEe
Q 006354 538 TAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWR 617 (649)
Q Consensus 538 ~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g 617 (649)
+.||+++++.|.+.| .+ |||+|||+|+++++|++++.||.||+||+ +|++|+|.+||+++.+|+.|. +++|++
T Consensus 428 ~~gy~~~~~~~~~~~---~~--g~~~TGD~~~~~~~g~l~i~gR~dd~i~~-~G~~v~p~eIE~~l~~~~~i~-~~~v~~ 500 (573)
T PRK05605 428 FKGYWNRPEETAKSF---LD--GWFRTGDVVVMEEDGFIRIVDRIKELIIT-GGFNVYPAEVEEVLREHPGVE-DAAVVG 500 (573)
T ss_pred hhhhcCChhHhhhcc---cC--CCcccCCEEEEcCCCcEEEEeccccceee-CCEEECHHHHHHHHHhCcccc-eEEEEe
Confidence 999999999999988 55 69999999999999999999999999997 699999999999999999999 999999
Q ss_pred cCCCCcccchhhh
Q 006354 618 NGPMKLASSTKIF 630 (649)
Q Consensus 618 ~~~~~~~~~~~~~ 630 (649)
.++...++.+.++
T Consensus 501 ~~~~~~~~~~~~~ 513 (573)
T PRK05605 501 LPREDGSEEVVAA 513 (573)
T ss_pred eecccCCeEEEEE
Confidence 8877666555443
No 70
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=4.1e-58 Score=508.50 Aligned_cols=451 Identities=22% Similarity=0.323 Sum_probs=372.7
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEc
Q 006354 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILA 162 (649)
Q Consensus 83 tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~ 162 (649)
+++++|++.++++|+++|+.+ +++ .+||+||.+++.++|+.|++.|+.+||+|++++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~------------~~~-----------~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~ 57 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVH------------HDR-----------TLTYAALSERVLALASGLRGLGLARGERVAIYL 57 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Confidence 478999999999999999986 333 699999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCC
Q 006354 163 ETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSG 242 (649)
Q Consensus 163 ~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~ 242 (649)
+|+++++++++||+++|++++|+++.++.+++..+++.+++++++++.+....+.......+.+..++.+++......
T Consensus 58 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 135 (515)
T TIGR03098 58 DKRLETVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASE-- 135 (515)
T ss_pred CCCHHHHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccC--
Confidence 999999999999999999999999999999999999999999999998877766665555556666666654322110
Q ss_pred CCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEE
Q 006354 243 VSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLA 322 (649)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~ 322 (649)
.......|+++....... .......+++++|+|||||||.||||.+||+++...+......+ .+.++|++++
T Consensus 136 -----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~l~ 207 (515)
T TIGR03098 136 -----GGGESPSWPKLLALGDAD--PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL-ENRPDDRLLA 207 (515)
T ss_pred -----CccccccHHHhhcccccc--ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh-CCCcccEEEE
Confidence 122334566655432211 22334568999999999999999999999999999988888777 8889999999
Q ss_pred ccChHHHHHHHHHHHHHHhCceEEeCC---cccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcc
Q 006354 323 YLPLAHVLELAAESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (649)
Q Consensus 323 ~~pl~h~~~~~~~~~~l~~G~~l~~~~---~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~ 399 (649)
.+|++|.+++..++.++..|+++++.+ +..+.+. ++++++|++.++|+++..+.+.....
T Consensus 208 ~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~~~~l~~~~~~~------ 270 (515)
T TIGR03098 208 VLPLSFDYGFNQLTTAFYVGATVVLHDYLLPRDVLKA-----------LEKHGITGLAAVPPLWAQLAQLDWPE------ 270 (515)
T ss_pred ECchhhHhHHHHHHHHHHcCCEEEEcCCCCHHHHHHH-----------HHHcCCceEecChHHHHHHHhcccCC------
Confidence 999999999988889999999999843 3344444 89999999999999998876421000
Q ss_pred hhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccccC
Q 006354 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYG 478 (649)
Q Consensus 400 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG 478 (649)
...+++|.+++||+++++++.+.+++.+ ++.+++.||
T Consensus 271 ------------------------------------------~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG 308 (515)
T TIGR03098 271 ------------------------------------------SAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYG 308 (515)
T ss_pred ------------------------------------------CCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeec
Confidence 0114899999999999999999999887 788999999
Q ss_pred cccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCC
Q 006354 479 LTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDER 557 (649)
Q Consensus 479 ~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~ 557 (649)
+||++......... ..+.+++|+|+++++++|++ +++.. ++.|+.|||+++|+.++.||+++++.|.+.|.....
T Consensus 309 ~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~---~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~ 384 (515)
T TIGR03098 309 LTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLR-EDGSE---CAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPP 384 (515)
T ss_pred cccccceEecccccccCCCCCcceecCCCEEEEEC-CCCCC---CCCCCceEEEEcCchhhccccCCchhhhhhhhccCC
Confidence 99987655443322 34568999999999999998 55543 678899999999999999999999999888753210
Q ss_pred -------cccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhh
Q 006354 558 -------GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIF 630 (649)
Q Consensus 558 -------~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~ 630 (649)
+.+||+|||+|++++||++++.||.||+||+ +|++|+|.+||++|.+||.|. +|+|++..++..++.+.++
T Consensus 385 ~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~-~~~v~~~~~~~~g~~~~~~ 462 (515)
T TIGR03098 385 RPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKT-SGYRVSPTEVEEVAYATGLVA-EAVAFGVPDPTLGQAIVLV 462 (515)
T ss_pred ccccccccccceeccceEEEcCCceEEEEeccccceec-CCEEeCHHHHHHHHhcCCCee-EEEEEeccCcccCceEEEE
Confidence 1258999999999999999999999999997 599999999999999999999 9999999988777666554
Q ss_pred h
Q 006354 631 Q 631 (649)
Q Consensus 631 ~ 631 (649)
.
T Consensus 463 ~ 463 (515)
T TIGR03098 463 V 463 (515)
T ss_pred E
Confidence 3
No 71
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.3e-58 Score=510.01 Aligned_cols=453 Identities=26% Similarity=0.357 Sum_probs=382.6
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..++.++|+++++.+|+++|+.. +++ .+||+||.++++++|+.|.+.|+++|++|++
T Consensus 5 ~~~l~~~l~~~~~~~p~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l 61 (521)
T PRK06187 5 PLTIGRILRHGARKHPDKEAVYF------------DGR-----------RTTYAELDERVNRLANALRALGVKKGDRVAV 61 (521)
T ss_pred cCCHHHHHHHHHHHCCCceEEEe------------CCc-----------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 46999999999999999999986 333 4999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|+++++++++||+++|++++|+++.++.+++..+++.+++++++++.+..+.+.++....+.++.++.+++....
T Consensus 62 ~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 139 (521)
T PRK06187 62 FDWNSHEYLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAA-- 139 (521)
T ss_pred ECCCCHHHHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCcccc--
Confidence 999999999999999999999999999999999999999999999999999888888887777777777776654321
Q ss_pred CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEE
Q 006354 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~ 320 (649)
.......++.++....... .......++++++++|||||||.||+|.+||+++.+........+ .+.++|++
T Consensus 140 ------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~ 211 (521)
T PRK06187 140 ------PLAPEVGEYEELLAAASDT-FDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL-KLSRDDVY 211 (521)
T ss_pred ------ccccccccHHHHhhcCCcc-CCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh-CCCCCCEE
Confidence 0012345566655443322 223445678999999999999999999999999999988888887 89999999
Q ss_pred EEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcch
Q 006354 321 LAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGL 400 (649)
Q Consensus 321 l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~ 400 (649)
++.+|++|.+++...+.++..|+++++.+.. + ...++..++++++|.++++|++++.+.......
T Consensus 212 ~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~---~-----~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~------- 276 (521)
T PRK06187 212 LVIVPMFHVHAWGLPYLALMAGAKQVIPRRF---D-----PENLLDLIETERVTFFFAVPTIWQMLLKAPRAY------- 276 (521)
T ss_pred EEeCCchHHhhHHHHHHHHHhCCEEEecCCC---C-----HHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCC-------
Confidence 9999999999998877799999999985543 1 122344499999999999999999887643210
Q ss_pred hHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcc
Q 006354 401 TKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLT 480 (649)
Q Consensus 401 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~T 480 (649)
....+++|.+++||+++++++.+.+.+.+++++++.||+|
T Consensus 277 ----------------------------------------~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~t 316 (521)
T PRK06187 277 ----------------------------------------FVDFSSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMT 316 (521)
T ss_pred ----------------------------------------ccCcchhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccC
Confidence 0112489999999999999999999998899999999999
Q ss_pred cccccccccCCCCC------CCCccCCCcccceEEEEecCCCCcccCCCC--CCccEEEEccccccccccCCCccchhhh
Q 006354 481 ETCAGSTFSEWDDP------SVGRVGPPVPCCYIKLVSWDEGGYKTSDKP--MPRGEIVVGGFNVTAGYFNNPGKTSEVY 552 (649)
Q Consensus 481 E~~~~~~~~~~~~~------~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~--g~~GEl~v~g~~v~~gY~~~~~~t~~~f 552 (649)
|++.++........ ..+++|+|++++.++|+| +++.. ++. |+.|||+|+|+.++.||+++++.+.+.|
T Consensus 317 E~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~---~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~ 392 (521)
T PRK06187 317 ETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DDGDE---LPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI 392 (521)
T ss_pred ccCcccccCCcccccccccccCCccccccCCeEEEEEC-CCCCC---CCCCCCCeeEEEEECcchhhhhcCCHHHHHHHh
Confidence 99877766544333 568999999999999999 44543 556 8999999999999999999999999988
Q ss_pred ccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhhh
Q 006354 553 KVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQS 632 (649)
Q Consensus 553 ~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~~ 632 (649)
.+ +||+|||+|+++++|.+++.||.||+||+ +|.+|+|.+||++|.++++|. +++|++..+...++.+.++..
T Consensus 393 ---~~--~~~~tGD~~~~~~~g~~~~~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~v~ 465 (521)
T PRK06187 393 ---DG--GWLHTGDVGYIDEDGYLYITDRIKDVIIS-GGENIYPRELEDALYGHPAVA-EVAVIGVPDEKWGERPVAVVV 465 (521)
T ss_pred ---hC--CceeccceEEEcCCCCEEEeecccceEEc-CCeEECHHHHHHHHHhCCCce-EEEEEeccCCCcCceEEEEEE
Confidence 55 69999999999999999999999999998 599999999999999999999 999999888766655544433
No 72
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.4e-58 Score=513.74 Aligned_cols=462 Identities=23% Similarity=0.344 Sum_probs=356.9
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHC-CCCCCCEE
Q 006354 80 GASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNF-GHNVDTRA 158 (649)
Q Consensus 80 ~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~-Gv~~gd~V 158 (649)
...++.++|.++++++|+++|+.. +++ .+||+||.++++++|+.|.+. |+++||+|
T Consensus 22 ~~~~~~~~l~~~~~~~p~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V 78 (562)
T PRK12492 22 AYKSVVEVFERSCKKFADRPAFSN------------LGV-----------TLSYAELERHSAAFAAYLQQHTDLVPGDRI 78 (562)
T ss_pred ccCcHHHHHHHHHHhCCCCeeEec------------CCc-----------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 346899999999999999999975 333 699999999999999999985 99999999
Q ss_pred EEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCC-C
Q 006354 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDG-S 237 (649)
Q Consensus 159 ~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~-~ 237 (649)
+++++|+++++++++||+++|++++|++|.++.+++.++++++++++++++....+.+..+.... .+..++...... .
T Consensus 79 ~i~~~n~~e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 157 (562)
T PRK12492 79 AVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT-GIEYLIEAKMGDLL 157 (562)
T ss_pred EEECCCCHHHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc-CceEEEeechhhcc
Confidence 99999999999999999999999999999999999999999999999999876655554432221 112221111000 0
Q ss_pred Ccc---------CCCCCC-C--CCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHH
Q 006354 238 EKD---------SGVSGG-I--SNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAA 305 (649)
Q Consensus 238 ~~~---------~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~ 305 (649)
... ..+... + ......+|+++..........+.....+++++|+|||||||.||||+++|+++...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~ 237 (562)
T PRK12492 158 PAAKGWLVNTVVDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANML 237 (562)
T ss_pred ccccchhcccccccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHH
Confidence 000 000000 0 0012245666554433222223445678999999999999999999999999988776
Q ss_pred HHHhhCCC--------CCC-CcEEEEccChHHHHHHHH-HHHHHHhCceEEeC-CcccccccchhhccCccccceeecce
Q 006354 306 AIKTLIPN--------PGR-SDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG-STLTMTDTSSKIKKGTKGDVSVLKPT 374 (649)
Q Consensus 306 ~~~~~~~~--------~~~-~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~-~~~~l~~~~~~~~~~~~~~i~~~~~t 374 (649)
.....+.. +.. ++++++.+|++|.+++.. ++..+..|++.++. ++... ..++..++++++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~i~~~~~t 309 (562)
T PRK12492 238 QVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDI--------PGFIKELGKWRFS 309 (562)
T ss_pred HHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCH--------HHHHHHHHHhCCc
Confidence 65544311 222 357789999999999865 45567888876652 22211 1122338999999
Q ss_pred EEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecC
Q 006354 375 LMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGG 454 (649)
Q Consensus 375 ~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG 454 (649)
++.++|.++..+...... ++...+++|.+++||
T Consensus 310 ~~~~~p~~~~~l~~~~~~-----------------------------------------------~~~~~~~lr~~~~gG 342 (562)
T PRK12492 310 ALLGLNTLFVALMDHPGF-----------------------------------------------KDLDFSALKLTNSGG 342 (562)
T ss_pred eeeCcHHHHHHHHhCcCc-----------------------------------------------ccccccceeEEEecc
Confidence 999999999887653110 001124899999999
Q ss_pred CCCCHHHHHHHHhhcCCccccccCcccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEc
Q 006354 455 APLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVG 533 (649)
Q Consensus 455 ~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~ 533 (649)
+++++++.+.|++.+++++++.||+||++.+++..... ....+++|+|+++++++|+| +++.. +++|+.|||+|+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd-~~~~~---~~~g~~Gel~v~ 418 (562)
T PRK12492 343 TALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGELARLGTVGIPVPGTALKVID-DDGNE---LPLGERGELCIK 418 (562)
T ss_pred ccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcccccCCccceecCCCEEEEEC-CCCCC---CCCCCceEEEEe
Confidence 99999999999988899999999999998776655433 23457899999999999999 45543 678999999999
Q ss_pred cccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccce
Q 006354 534 GFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHI 613 (649)
Q Consensus 534 g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~ 613 (649)
|+.++.|||++|+.|.+.|. .+ +||+|||+|+++++|.++|.||.||+||++ |++|+|.+||++|.+||.|. ++
T Consensus 419 g~~~~~gY~~~~~~t~~~~~--~~--g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~-G~~i~~~eIE~~l~~~~~v~-~~ 492 (562)
T PRK12492 419 GPQVMKGYWQQPEATAEALD--AE--GWFKTGDIAVIDPDGFVRIVDRKKDLIIVS-GFNVYPNEIEDVVMAHPKVA-NC 492 (562)
T ss_pred CCccccccccCchhhhhccc--CC--CceecCcEEEECCCCeEEEecccCCeEEEC-CEEECHHHHHHHHHhCCCee-EE
Confidence 99999999999999999885 45 899999999999999999999999999985 99999999999999999999 99
Q ss_pred EEEecCCCCcccchhhh
Q 006354 614 RLWRNGPMKLASSTKIF 630 (649)
Q Consensus 614 ~V~g~~~~~~~~~~~~~ 630 (649)
+|++.++...++.+.++
T Consensus 493 ~v~~~~~~~~~~~~~~~ 509 (562)
T PRK12492 493 AAIGVPDERSGEAVKLF 509 (562)
T ss_pred EEEeccCCCCCceEEEE
Confidence 99999887766555444
No 73
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4.5e-59 Score=516.29 Aligned_cols=427 Identities=22% Similarity=0.314 Sum_probs=324.5
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEc
Q 006354 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILA 162 (649)
Q Consensus 83 tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~ 162 (649)
-+.++|+++++++|+++|+.+. ++ +.++++||+||.++++++|++|.++ ++||+|+|++
T Consensus 3 ~~~~~l~~~~~~~~~~~a~~~~-----------~~--------~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~ 61 (525)
T PRK05851 3 ELAAALSDAMTASGRDLVVLDR-----------ES--------GLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVG 61 (525)
T ss_pred hHHHHHHHHhcCCCCceEEeCC-----------CC--------CcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEc
Confidence 3889999999999999999863 22 2346799999999999999999988 8999999999
Q ss_pred cCCHHHHHHHHHHHhcCCEEEEecCC--------CCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecC
Q 006354 163 ETCVEWFIAFQGCFRQSITVVTIYSS--------LGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFEN 234 (649)
Q Consensus 163 ~~~~~~vva~lA~~~~G~~~vpl~~~--------~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~ 234 (649)
+|++++++++|||+++|++++ ++|. ...+++.+++++++++++|++....+.+...... +.+.+
T Consensus 62 ~~~~e~~~~~la~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-------~~~~~ 133 (525)
T PRK05851 62 EPTVELVAAIQGAWLAGAAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS-------VTVHD 133 (525)
T ss_pred CCCHHHHHHHHHHHHcCCCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc-------ccccc
Confidence 999999999999999999865 4432 2235666789999999999998766554432111 00000
Q ss_pred CCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCC
Q 006354 235 DGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP 314 (649)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~ 314 (649)
+....... .........++++|+|+|||||||.||||++||+++++.+......+ .+
T Consensus 134 --------------------~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-~~ 190 (525)
T PRK05851 134 --------------------LATAAHTN--RSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV-GL 190 (525)
T ss_pred --------------------cccccccc--ccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CC
Confidence 00000000 00011224678999999999999999999999999999998888887 78
Q ss_pred C-CCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHH
Q 006354 315 G-RSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKK 393 (649)
Q Consensus 315 ~-~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 393 (649)
. ++|++++.+|++|++++..++.+++.|+++++.+...+... +..+...++++++|++..+|.++..+... ...
T Consensus 191 ~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~----~~~~~~~i~~~~~t~~~~p~~~~~~l~~~-~~~ 265 (525)
T PRK05851 191 DAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSAS----PFRWLSWLSDSRATLTAAPNFAYNLIGKY-ARR 265 (525)
T ss_pred CCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHC----HHHHHHHHHHhCCeEEeCCcHHHHHHHHh-hcc
Confidence 7 89999999999999999888889999999998542211100 11122338899999875544444433221 100
Q ss_pred HHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhh---cC
Q 006354 394 VEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINIC---MG 470 (649)
Q Consensus 394 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~---~~ 470 (649)
. .....++||.+++||+++++++.+.|.+. +|
T Consensus 266 ~---------------------------------------------~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g 300 (525)
T PRK05851 266 V---------------------------------------------SDVDLGALRVALNGGEPVDCDGFERFATAMAPFG 300 (525)
T ss_pred c---------------------------------------------cCCCHHHhheeEeccccCCHHHHHHHHHHHhhcC
Confidence 0 00011379999999999999998888764 34
Q ss_pred C---ccccccCcccccccccccCCC---------------CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEE
Q 006354 471 A---PIGQAYGLTETCAGSTFSEWD---------------DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVV 532 (649)
Q Consensus 471 ~---~l~~~YG~TE~~~~~~~~~~~---------------~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v 532 (649)
. .+++.||+||++..++..... ..+.+++|+|+||++++|+|.+.... ++.|+.|||+|
T Consensus 301 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~---~~~g~~GEl~v 377 (525)
T PRK05851 301 FDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAG---VAGREIGEIEI 377 (525)
T ss_pred CChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCcc---CCCCCeEEEEE
Confidence 4 599999999997665543211 12346899999999999998443322 67899999999
Q ss_pred ccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccc
Q 006354 533 GGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHH 612 (649)
Q Consensus 533 ~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~ 612 (649)
+|++++.|||++|+.+ .+ +||+|||+|+++ +|+|+|+||+||+||+ +|++|+|.|||++|.+||+|. +
T Consensus 378 ~g~~~~~GY~~~~~~~-------~~--~~~~TGDl~~~~-~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~-~ 445 (525)
T PRK05851 378 RGASMMSGYLGQAPID-------PD--DWFPTGDLGYLV-DGGLVVCGRAKELITV-AGRNIFPTEIERVAAQVRGVR-E 445 (525)
T ss_pred ecCchhhccccCCccC-------CC--CceeccceEEEE-CCEEEEEeecCCEEEE-CCEEeCHHHHHHHHHhCCCcc-c
Confidence 9999999999998643 34 899999999996 8999999999999998 599999999999999999999 9
Q ss_pred eEEEecCCCCcccc
Q 006354 613 IRLWRNGPMKLASS 626 (649)
Q Consensus 613 ~~V~g~~~~~~~~~ 626 (649)
|+|++.+++..++.
T Consensus 446 ~~vv~~~~~~~~~~ 459 (525)
T PRK05851 446 GAVVAVGTGEGSAR 459 (525)
T ss_pred ceEEEEEecCCCCc
Confidence 99999887766543
No 74
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.6e-58 Score=558.95 Aligned_cols=455 Identities=24% Similarity=0.323 Sum_probs=366.0
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEE
Q 006354 79 KGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRA 158 (649)
Q Consensus 79 ~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V 158 (649)
+...++.++|+++++++|+++|+... +++ .+||+||.++++++|+.|++ ++++||+|
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~-----------~~~-----------~~Ty~el~~~~~~~a~~L~~-~~~~g~~V 668 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADS-----------TGG-----------ELSYGKALTGALALARLLKR-ELKDEENV 668 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcC-----------CCC-----------cCcHHHHHHHHHHHHHHHHH-hCCCCCeE
Confidence 44579999999999999999999742 232 59999999999999999987 48999999
Q ss_pred EEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhh--ccCCCccEEEEecCCC
Q 006354 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVS--SSLKTIKNVIYFENDG 236 (649)
Q Consensus 159 ~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~--~~~~~~~~ii~~~~~~ 236 (649)
+++++|+++++++++||+++|++++|++|.++++++.++++++++++++++++..+.+.... ...+....++..++..
T Consensus 669 ~i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1146)
T PRK08633 669 GILLPPSVAGALANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLK 748 (1146)
T ss_pred EEECCCchHHHHHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhc
Confidence 99999999999999999999999999999999999999999999999999988776654311 1122233444443321
Q ss_pred CCccCCCCCCCCCceEeehHHHHhcCCCC-----CCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC
Q 006354 237 SEKDSGVSGGISNWTVSSFSEVEKLGKRS-----PVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI 311 (649)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~ 311 (649)
... .....+.+........ ........++|+++|+|||||||.||||++||+++.+.+......+
T Consensus 749 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~ 818 (1146)
T PRK08633 749 AKI----------SKVDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF 818 (1146)
T ss_pred ccc----------chhHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc
Confidence 100 0001111111110000 0001345679999999999999999999999999999998888888
Q ss_pred CCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeC----CcccccccchhhccCccccceeecceEEEechHHHHHH
Q 006354 312 PNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG----STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRV 386 (649)
Q Consensus 312 ~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~----~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 386 (649)
++.++|++++.+|++|.+++.. .+.++..|+++++. ++..+.+. ++++++|++.++|++++.+
T Consensus 819 -~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~~~~l 886 (1146)
T PRK08633 819 -NLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKL-----------VAKHRATILLGTPTFLRLY 886 (1146)
T ss_pred -CCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHH-----------HHHcCCeEEEecHHHHHHH
Confidence 8889999999999999999876 67889999999883 22333333 9999999999999999887
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHH
Q 006354 387 REGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFIN 466 (649)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~ 466 (649)
.+.... ++...+++|.+++||+++++++.+.++
T Consensus 887 ~~~~~~-----------------------------------------------~~~~~~~lr~~~~gg~~~~~~~~~~~~ 919 (1146)
T PRK08633 887 LRNKKL-----------------------------------------------HPLMFASLRLVVAGAEKLKPEVADAFE 919 (1146)
T ss_pred Hhcccc-----------------------------------------------CcccCCCeeeEEEcCCcCCHHHHHHHH
Confidence 653110 011124899999999999999999999
Q ss_pred hhcCCccccccCcccccccccccCCC----------CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcccc
Q 006354 467 ICMGAPIGQAYGLTETCAGSTFSEWD----------DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFN 536 (649)
Q Consensus 467 ~~~~~~l~~~YG~TE~~~~~~~~~~~----------~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~ 536 (649)
+.+|+++++.||+||++.+++..... ....+++|+|+||++++|+|++++.. +++|+.|||+|+|++
T Consensus 920 ~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~---~~~g~~Gel~v~g~~ 996 (1146)
T PRK08633 920 EKFGIRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEE---LPPGEDGLILIGGPQ 996 (1146)
T ss_pred HHhCCCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCcc---CCCCCceEEEEcCCC
Confidence 98999999999999998776544321 12457899999999999999766654 789999999999999
Q ss_pred ccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCc--ccccceE
Q 006354 537 VTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLP--LLFHHIR 614 (649)
Q Consensus 537 v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p--~V~~~~~ 614 (649)
++.||+++|+.|++.|.. .++.+||+|||+|++|+||++++.||.||+||+ +|++|+|.|||++|.+|| .+. +++
T Consensus 997 ~~~gY~~~~~~t~~~~~~-~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~~~~~-~~~ 1073 (1146)
T PRK08633 997 VMKGYLGDPEKTAEVIKD-IDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKI-GGEMVPLGAVEEELAKALGGEEV-VFA 1073 (1146)
T ss_pred ccccccCCccchHHHhhc-CCCCCeEECCCEEEEcCCceEEEEecccchhhh-CcEEECHHHHHHHHHhccCCCCc-eEE
Confidence 999999999999998852 234589999999999999999999999999997 599999999999999999 566 799
Q ss_pred EEecCCCCcccchhhhh
Q 006354 615 LWRNGPMKLASSTKIFQ 631 (649)
Q Consensus 615 V~g~~~~~~~~~~~~~~ 631 (649)
|++.+++..|+.+.++.
T Consensus 1074 v~~~~~~~~g~~~~~~v 1090 (1146)
T PRK08633 1074 VTAVPDEKKGEKLVVLH 1090 (1146)
T ss_pred EEeccCCCCCcEEEEEE
Confidence 99999998887665544
No 75
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-58 Score=509.59 Aligned_cols=450 Identities=21% Similarity=0.279 Sum_probs=368.0
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..|+.++|..+++++|+++|+.+ +++ .+||+||.+++.++|..|.+.|+++||+|++
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l 66 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVF------------GDR-----------SWTYAELDAAVNRVAAALLDLGLKKGDRVAA 66 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 46899999999999999999986 333 6999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.+....+.+....... ..+.......
T Consensus 67 ~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---- 141 (523)
T PRK08316 67 LGHNSDAYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPV-DTLILSLVLG---- 141 (523)
T ss_pred ECCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCc-cceeeeeccc----
Confidence 99999999999999999999999999999999999999999999999999887777655433331 1111111100
Q ss_pred CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEE
Q 006354 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~ 320 (649)
..........++++....... ........+++++|+|||||||.||+|.+||+++++.+......+ .+.++|++
T Consensus 142 ----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~ 215 (523)
T PRK08316 142 ----GREAPGGWLDFADWAEAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG-DMSADDIP 215 (523)
T ss_pred ----ccccccchhhHHHHHhcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCCceE
Confidence 001112334555554433222 123456778999999999999999999999999999988887777 89999999
Q ss_pred EEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcc
Q 006354 321 LAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (649)
Q Consensus 321 l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~ 399 (649)
++.+|++|..++.. ++.++..|+++++.+... ...++..++++++|++.++|.++..+......
T Consensus 216 ~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------- 280 (523)
T PRK08316 216 LHALPLYHCAQLDVFLGPYLYVGATNVILDAPD--------PELILRTIEAERITSFFAPPTVWISLLRHPDF------- 280 (523)
T ss_pred EEccCCchhhhHHHHHHHHHhcCceEEEecCCC--------HHHHHHHHHHhCCeEEEeCHHHHHHHHcCccc-------
Confidence 99999999998865 455688999999843221 11223339999999999999999887653110
Q ss_pred hhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccccC
Q 006354 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYG 478 (649)
Q Consensus 400 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG 478 (649)
+....+++|.+++||++++.++.+.+++.+ ++++++.||
T Consensus 281 ----------------------------------------~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG 320 (523)
T PRK08316 281 ----------------------------------------DTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYG 320 (523)
T ss_pred ----------------------------------------ccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeec
Confidence 001124799999999999999999999887 789999999
Q ss_pred cccccccccccCCCC--CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC
Q 006354 479 LTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE 556 (649)
Q Consensus 479 ~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~ 556 (649)
+||++.+++.....+ ...+++|+|+++++++|+| +++.. ++.|+.|||+++|+.++.||+++++.+++.| .
T Consensus 321 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~---~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~---~ 393 (523)
T PRK08316 321 QTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVD-DDGND---VAPGEVGEIVHRSPQLMLGYWDDPEKTAEAF---R 393 (523)
T ss_pred ccccCccccccCccccccccCCcccCCCCcEEEEEc-CCCCC---CCCCCcceEEEECCchhhhhcCCHHHHHHHh---h
Confidence 999988776654322 3458999999999999999 55543 6789999999999999999999999999998 5
Q ss_pred CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhh
Q 006354 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIF 630 (649)
Q Consensus 557 ~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~ 630 (649)
+ +||+|||+|++++||.++++||.||+||+ +|++|+|.+||+.|.++|+|. +++|++.+++..++.+.++
T Consensus 394 ~--~~~~TGDl~~~~~~g~l~i~gR~~~~i~~-~G~~i~~~~iE~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~ 463 (523)
T PRK08316 394 G--GWFHSGDLGVMDEEGYITVVDRKKDMIKT-GGENVASREVEEALYTHPAVA-EVAVIGLPDPKWIEAVTAV 463 (523)
T ss_pred C--CCeeccceEEEcCCceEEEecccccEEEe-CCeEECHHHHHHHHHhCCChh-eEeEecccCcccCCeEEEE
Confidence 6 89999999999999999999999999998 599999999999999999999 9999999988876555443
No 76
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=7.5e-58 Score=504.98 Aligned_cols=436 Identities=23% Similarity=0.364 Sum_probs=359.1
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.+++..++ ++|+++|+... +++ .+||+||.++++++|++|+++|+++||+|+++
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~-----------~~~-----------~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~ 59 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETP-----------DGL-----------RYTYGDLDAASARLANLLVALGVKPGDRVAVQ 59 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeC-----------CCC-----------EEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 58999999999 99999999752 343 69999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|++++|+++.++++++..+++.+++++++++......+....... ....++.++....
T Consensus 60 ~~~~~e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---- 134 (504)
T PRK07514 60 VEKSPEALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAA-GAPHVETLDADGT---- 134 (504)
T ss_pred CCCCHHHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhcc-CCceEEEecCCCc----
Confidence 99999999999999999999999999999999999999999999999988777666554332 2232333332211
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEE
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l 321 (649)
..+.+..... ..........++++++|+|||||||.||+|++||+++...+......+ .+.++|+++
T Consensus 135 -----------~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l 201 (504)
T PRK07514 135 -----------GSLLEAAAAA-PDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW-RFTPDDVLI 201 (504)
T ss_pred -----------ccHHHhhhhc-CcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCccEEE
Confidence 1111111111 111123345678999999999999999999999999999988887777 888999999
Q ss_pred EccChHHHHHHHH-HHHHHHhCceEEeCCc---ccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhh
Q 006354 322 AYLPLAHVLELAA-ESIMLCAGCAIGYGST---LTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEK 397 (649)
Q Consensus 322 ~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~---~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~ 397 (649)
+.+|++|..++.. ++.++..|+++++.+. ..+.+. + .++|++.++|.++..+......
T Consensus 202 ~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-----------i--~~~t~~~~~P~~~~~l~~~~~~----- 263 (504)
T PRK07514 202 HALPIFHTHGLFVATNVALLAGASMIFLPKFDPDAVLAL-----------M--PRATVMMGVPTFYTRLLQEPRL----- 263 (504)
T ss_pred EecchHHHHHHHHHHHHHHhcCcEEEECCCCCHHHHHHH-----------H--HhheeeecHHHHHHHHHcCCCC-----
Confidence 9999999999765 6678999999998543 223222 5 4799999999999888653100
Q ss_pred cchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCcccccc
Q 006354 398 GGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAY 477 (649)
Q Consensus 398 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~Y 477 (649)
.....+++|.+++||+++++++.+.|+..+++++++.|
T Consensus 264 ------------------------------------------~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~Y 301 (504)
T PRK07514 264 ------------------------------------------TREAAAHMRLFISGSAPLLAETHREFQERTGHAILERY 301 (504)
T ss_pred ------------------------------------------CcccccceeeEEecCCCCCHHHHHHHHHHhCCcceeec
Confidence 00112489999999999999999999999999999999
Q ss_pred CcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCC
Q 006354 478 GLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDER 557 (649)
Q Consensus 478 G~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~ 557 (649)
|+||++...+..........++|.|+++++++|+|++++.. ++.|+.|||+|+|++++.||+++++.+++.|. .+
T Consensus 302 G~tE~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~---~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~--~~ 376 (504)
T PRK07514 302 GMTETNMNTSNPYDGERRAGTVGFPLPGVSLRVTDPETGAE---LPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFR--AD 376 (504)
T ss_pred ccccccccccCCccccccCcccccCCCCcEEEEEECCCCCC---CCCCCceEEEEecCCccccccCCchhhhhhcc--cC
Confidence 99999876554333334457899999999999999666654 67899999999999999999999999999996 45
Q ss_pred cccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccch
Q 006354 558 GMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASST 627 (649)
Q Consensus 558 ~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~ 627 (649)
+||+|||+|+++++|++++.||.||+||+ +|++|+|.+||+++.++++|. +++|++.++...++..
T Consensus 377 --~~~~TGDl~~~~~~g~~~~~GR~~~~i~~-~G~~i~~~~IE~~l~~~~~v~-~~~v~~~~~~~~~~~~ 442 (504)
T PRK07514 377 --GFFITGDLGKIDERGYVHIVGRGKDLIIS-GGYNVYPKEVEGEIDELPGVV-ESAVIGVPHPDFGEGV 442 (504)
T ss_pred --CCeeecceEEEcCCccEEEeccccceEEe-CCeEECHHHHHHHHHhCCCee-EEEEEeCCCCCcCceE
Confidence 89999999999999999999999999997 599999999999999999999 9999999887665443
No 77
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.5e-58 Score=508.37 Aligned_cols=455 Identities=20% Similarity=0.248 Sum_probs=360.7
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.++|+.+++++|++.++.++. +| +++.+||.||.++++++|++|.+.|+++||+|+++
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~~----------~~---------~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~ 70 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRRV----------EG---------DIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTL 70 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEeec----------cC---------cceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 579999999999999998887532 22 23469999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|++++|++|.++++++.++++.+++++++++.+..+.+.++....+.++.++...+.....
T Consensus 71 ~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 148 (539)
T PRK07008 71 AWNGYRHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLP-- 148 (539)
T ss_pred cCCcHHHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccc--
Confidence 999999999999999999999999999999999999999999999999888777766665566666666554432111
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHH--HHhhCCCCCCCcE
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA--IKTLIPNPGRSDV 319 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~--~~~~~~~~~~~d~ 319 (649)
. ......+++++....... .......++++++++|||||||.||||++||++++..... ....+ .+.++|+
T Consensus 149 ---~--~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d~ 221 (539)
T PRK07008 149 ---A--GSTPLLCYETLVGAQDGD-YDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM-GLSARDA 221 (539)
T ss_pred ---c--CCcccccHHHHhcccCCC-cCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc-CCCCCce
Confidence 0 113356677765433221 1123456788999999999999999999999998754332 23345 7888999
Q ss_pred EEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcc
Q 006354 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~ 399 (649)
++..+|++|..++...+.++..|+++++.++.. + ...++..++++++|++.++|+++..+.+......
T Consensus 222 ~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~--~-----~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~----- 289 (539)
T PRK07008 222 VLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDL--D-----GKSLYELIEAERVTFSAGVPTVWLGLLNHMREAG----- 289 (539)
T ss_pred EEecCchHHhhhHHHHHHHHhcCceEEEecCCc--C-----HHHHHHHHHHcCCEEEEechHHHHHHHhcccccC-----
Confidence 999999999888776778899999999853321 1 1122333999999999999999998876321100
Q ss_pred hhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCc
Q 006354 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGL 479 (649)
Q Consensus 400 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~ 479 (649)
...+++|.+++||+++++++.+.+.+.+++++++.||+
T Consensus 290 ------------------------------------------~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~ 327 (539)
T PRK07008 290 ------------------------------------------LRFSTLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGM 327 (539)
T ss_pred ------------------------------------------CCcccceEEEEcCCCCCHHHHHHHHHHhCCceeccccc
Confidence 01148999999999999999999988889999999999
Q ss_pred ccccccccccCCCC-----------CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccc
Q 006354 480 TETCAGSTFSEWDD-----------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKT 548 (649)
Q Consensus 480 TE~~~~~~~~~~~~-----------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t 548 (649)
||++..++...... ....++|+|+|+++++|+| +++...+ ...++.|||+++|+.++.||+++++
T Consensus 328 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~-~~~~~~Gei~v~g~~~~~gy~~~~~-- 403 (539)
T PRK07008 328 TEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELP-WDGKAFGDLQVRGPWVIDRYFRGDA-- 403 (539)
T ss_pred ccccccceecccccccccCCchhhhhhcccCCccccceEEEEEC-CCCCccC-CCCCcceEEEEeCCccchhhcCChh--
Confidence 99987654432110 1136799999999999999 4554321 1223579999999999999999983
Q ss_pred hhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchh
Q 006354 549 SEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTK 628 (649)
Q Consensus 549 ~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~ 628 (649)
..+ .+ |||+|||+|++++||++++.||.||+||+ +|++|+|.+||++|.+||.|. +++|++.++...++.+.
T Consensus 404 -~~~---~~--g~~~TGD~~~~~~dg~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~v~-~~~v~~~~~~~~~~~~~ 475 (539)
T PRK07008 404 -SPL---VD--GWFPTGDVATIDADGFMQITDRSKDVIKS-GGEWISSIDIENVAVAHPAVA-EAACIACAHPKWDERPL 475 (539)
T ss_pred -hhh---cC--CCcccCceEEEcCCCcEEEeecccCEEEe-CCeEEcHHHHHHHHHhCCcee-EEEEEecCCchhccceE
Confidence 344 34 89999999999999999999999999996 599999999999999999999 99999998877665544
Q ss_pred hh
Q 006354 629 IF 630 (649)
Q Consensus 629 ~~ 630 (649)
++
T Consensus 476 ~~ 477 (539)
T PRK07008 476 LV 477 (539)
T ss_pred EE
Confidence 43
No 78
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-57 Score=510.18 Aligned_cols=446 Identities=24% Similarity=0.331 Sum_probs=357.8
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.|+.++|++.++++|+++|+++.+ ++ +.+||+||.++++++|++|.+.|+++||+|+|+
T Consensus 18 ~~l~~~l~~~~~~~p~~~a~~~~~----------~~-----------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~ 76 (558)
T PRK12583 18 QTIGDAFDATVARFPDREALVVRH----------QA-----------LRYTWRQLADAVDRLARGLLALGVQPGDRVGIW 76 (558)
T ss_pred CcHHHHHHHHHHHCCCCeEEEecC----------CC-----------cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 589999999999999999998742 22 369999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhH-----HHHHHhhc-------------cC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVSS-------------SL 223 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~l~~~~~-------------~~ 223 (649)
++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++.... ..+.+... ..
T Consensus 77 ~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (558)
T PRK12583 77 APNCAEWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERL 156 (558)
T ss_pred CCCChHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccC
Confidence 9999999999999999999999999999999999999999999999976432 22222111 12
Q ss_pred CCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCC-----CCCCCCCCCCCeEEEEeecCCCCCcceEEechH
Q 006354 224 KTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRS-----PVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHG 298 (649)
Q Consensus 224 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~ 298 (649)
+.++.++..+.... .....|+++....... ........++++++++|||||||.||||.+||+
T Consensus 157 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~ 224 (558)
T PRK12583 157 PELRGVVSLAPAPP------------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHH 224 (558)
T ss_pred CcceEEEEecCCCC------------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHH
Confidence 23333343322111 1123344443322111 011133457889999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeC----CcccccccchhhccCccccceeecc
Q 006354 299 NIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG----STLTMTDTSSKIKKGTKGDVSVLKP 373 (649)
Q Consensus 299 ~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~----~~~~l~~~~~~~~~~~~~~i~~~~~ 373 (649)
++.+.+......+ ++..+|++++.+|++|.++... .+.++..|+++++. ++..+++. ++++++
T Consensus 225 ~l~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~-----------i~~~~~ 292 (558)
T PRK12583 225 NILNNGYFVAESL-GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQA-----------VEEERC 292 (558)
T ss_pred HHHHHHHHHHHHh-CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHH-----------HHHcCC
Confidence 9999988888877 8899999999999999999766 66779999999862 33333333 999999
Q ss_pred eEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEec
Q 006354 374 TLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICG 453 (649)
Q Consensus 374 t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~g 453 (649)
|+++++|+++..+....... ....+++|.+++|
T Consensus 293 t~l~~~P~~~~~l~~~~~~~-----------------------------------------------~~~~~~lr~i~~~ 325 (558)
T PRK12583 293 TALYGVPTMFIAELDHPQRG-----------------------------------------------NFDLSSLRTGIMA 325 (558)
T ss_pred eEEeccHHHHHHHHcccccc-----------------------------------------------CCCchhheEEEec
Confidence 99999999987765421100 0011489999999
Q ss_pred CCCCCHHHHHHHHhhcC-CccccccCcccccccccccCCC---CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccE
Q 006354 454 GAPLSADSQRFINICMG-APIGQAYGLTETCAGSTFSEWD---DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGE 529 (649)
Q Consensus 454 G~~l~~~~~~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~~---~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GE 529 (649)
|+++++++.+.+.+.++ ..+++.||+||++.+++..... ..+..++|+|+|++.++|+|++ +.. ++.|+.||
T Consensus 326 G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~---~~~g~~Ge 401 (558)
T PRK12583 326 GAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GAT---VPRGEIGE 401 (558)
T ss_pred CCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCC-CCC---CCCCCeeE
Confidence 99999999999888775 5799999999998877654332 2245799999999999999954 443 78899999
Q ss_pred EEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCccc
Q 006354 530 IVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLL 609 (649)
Q Consensus 530 l~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V 609 (649)
|+|+|+.++.||+++++.+.+.|. .+ +||+|||+|++++||++++.||.||+||+ +|++|+|.+||++|.+||+|
T Consensus 402 l~v~g~~~~~gy~~~~~~~~~~~~--~~--~~~~TGDl~~~~~dg~l~i~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v 476 (558)
T PRK12583 402 LCTRGYSVMKGYWNNPEATAESID--ED--GWMHTGDLATMDEQGYVRIVGRSKDMIIR-GGENIYPREIEEFLFTHPAV 476 (558)
T ss_pred EEEEeCccchhhcCChHHHHhhcC--CC--CCeeccceEEECCCccEEEEecccceeEE-CCEEeCHHHHHHHHHhCCCe
Confidence 999999999999999999988875 45 89999999999999999999999999997 59999999999999999999
Q ss_pred ccceEEEecCCCCcccchhh
Q 006354 610 FHHIRLWRNGPMKLASSTKI 629 (649)
Q Consensus 610 ~~~~~V~g~~~~~~~~~~~~ 629 (649)
. +++|++..+...++...+
T Consensus 477 ~-~~~v~~~~~~~~~~~~~~ 495 (558)
T PRK12583 477 A-DVQVFGVPDEKYGEEIVA 495 (558)
T ss_pred e-EEEEEeeecCCCCcEEEE
Confidence 9 999999887765544333
No 79
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-57 Score=506.09 Aligned_cols=445 Identities=20% Similarity=0.256 Sum_probs=351.1
Q ss_pred CCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCE
Q 006354 78 WKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTR 157 (649)
Q Consensus 78 ~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~ 157 (649)
.++..++.++|.++++++|+++|+.. +++ .+||+||.+++.++|+.|.+.|+++||+
T Consensus 6 ~~~~~~l~~~l~~~a~~~p~~~a~~~------------~~~-----------~~Ty~~L~~~~~~~a~~L~~~g~~~g~~ 62 (540)
T PRK06164 6 APRADTLASLLDAHARARPDAVALID------------EDR-----------PLSRAELRALVDRLAAWLAAQGVRRGDR 62 (540)
T ss_pred ccCCCCHHHHHHHHHHhCCCCeEEec------------CCC-----------cccHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 35557999999999999999999974 332 5999999999999999999999999999
Q ss_pred EEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhH-----HHHHHhhc-cCCCccEEEE
Q 006354 158 AAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVSS-SLKTIKNVIY 231 (649)
Q Consensus 158 V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~l~~~~~-~~~~~~~ii~ 231 (649)
|+++++|+++++++++||+++|++++|+++..+.+++.+++++++++++|++.+.. +.+..... ..+.++.++.
T Consensus 63 V~i~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (540)
T PRK06164 63 VAVWLPNCIEWVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAV 142 (540)
T ss_pred EEEEcCCcHHHHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEE
Confidence 99999999999999999999999999999999999999999999999999987642 22222221 1234555555
Q ss_pred ecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCC---CCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHH
Q 006354 232 FENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPV---DPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK 308 (649)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~ 308 (649)
++........ .....+.++......... ......++++++++|||||||.||||++||+++.+.+....
T Consensus 143 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~ 214 (540)
T PRK06164 143 VDDAADATPA--------PAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIA 214 (540)
T ss_pred eccCcccCCC--------CCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHH
Confidence 5421110000 000001111110000000 01233568899999999999999999999999999999888
Q ss_pred hhCCCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHH
Q 006354 309 TLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVRE 388 (649)
Q Consensus 309 ~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~ 388 (649)
..+ ++..++++++.+|++|.+++..++.++..|+++++.+.... ..++..++++++|+++++|.++..+.+
T Consensus 215 ~~~-~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~--------~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 215 RAY-GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCEPVFDA--------ARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred Hhc-CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEecCCCCH--------HHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 888 88899999999999999999888899999999988433211 112333999999999999999998876
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecC-CCCCHHHHHHHHh
Q 006354 389 GVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGG-APLSADSQRFINI 467 (649)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG-~~l~~~~~~~~~~ 467 (649)
.... ....+++|.+.++| .+...++.+++..
T Consensus 286 ~~~~------------------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (540)
T PRK06164 286 TAGE------------------------------------------------RADFPSARLFGFASFAPALGELAALARA 317 (540)
T ss_pred hhcc------------------------------------------------cCCCcceeeeeeccCCcchHHHHHHHhh
Confidence 4100 00114788877665 5566667777766
Q ss_pred hcCCccccccCcccccccccccCCCC---CCCCccCCCc-ccceEEEEecCCCCcccCCCCCCccEEEEccccccccccC
Q 006354 468 CMGAPIGQAYGLTETCAGSTFSEWDD---PSVGRVGPPV-PCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFN 543 (649)
Q Consensus 468 ~~~~~l~~~YG~TE~~~~~~~~~~~~---~~~~~vG~p~-p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~ 543 (649)
. ++++++.||+||++.+++...... ......|.|+ +++.++|+|++++.. ++.|+.|||||+|++++.||++
T Consensus 318 ~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~---~~~g~~Gel~v~g~~~~~gY~~ 393 (540)
T PRK06164 318 R-GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGAL---LPDGESGEIEIRAPSLMRGYLD 393 (540)
T ss_pred c-CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcC---CCCCCeeEEEEecccccccccC
Confidence 5 899999999999988766554322 2235678875 899999999766654 6789999999999999999999
Q ss_pred CCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCC
Q 006354 544 NPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGP 620 (649)
Q Consensus 544 ~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~ 620 (649)
+|+.|++.|. .+ +||+|||+|++++||.+++.||.||+||+ +|++|+|.+||++|.+||+|. +++|++...
T Consensus 394 ~~~~t~~~~~--~~--~~~~TGDl~~~~~~g~l~~~GR~~~~i~~-~G~~i~p~eIE~~l~~~~~v~-~~~v~~~~~ 464 (540)
T PRK06164 394 NPDATARALT--DD--GYFRTGDLGYTRGDGQFVYQTRMGDSLRL-GGFLVNPAEIEHALEALPGVA-AAQVVGATR 464 (540)
T ss_pred Cchhhhhccc--CC--CceecCCeEEEcCCceEEEEeecCCeEEE-CCEEcCHHHHHHHHHhCCCce-eEEEEecCC
Confidence 9999999986 56 89999999999999999999999999998 599999999999999999999 999999763
No 80
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-57 Score=500.47 Aligned_cols=432 Identities=22% Similarity=0.273 Sum_probs=352.1
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.++|+++++++|+++|+.+ +++ .+||.||.+++.++|.+|.+.|+++|++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~------------~~~-----------~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~ 58 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVY------------RDQ-----------EISYAEFHQRILQAAGMLHARGIGQGDVVALL 58 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEE------------CCc-----------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 5788999999999999999986 444 69999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.+....... ....+.++....
T Consensus 59 ~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~~~~---- 127 (497)
T PRK06145 59 MKNSAAFLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-------ETPKIVIDAAAQ---- 127 (497)
T ss_pred CCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-------ccceEEecCccc----
Confidence 999999999999999999999999999999999999999999999998776443210 011222221100
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEE
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l 321 (649)
..+..+.. ............++++++++|||||||.||+|++||+++...+......+ .+..+++++
T Consensus 128 -----------~~~~~~~~-~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~~ 194 (497)
T PRK06145 128 -----------ADSRRLAQ-GGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL-GLTASERLL 194 (497)
T ss_pred -----------chhHHHhc-cCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-CCCCCcEEE
Confidence 00111111 11111112345678999999999999999999999999987776666666 888999999
Q ss_pred EccChHHHHHHHH-HHHHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhh
Q 006354 322 AYLPLAHVLELAA-ESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEK 397 (649)
Q Consensus 322 ~~~pl~h~~~~~~-~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~ 397 (649)
..+|++|.+++.. .+.++..|+++++. ++..+.+. ++++++|++.++|+++..++......
T Consensus 195 ~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~~~~ll~~~~~~---- 259 (497)
T PRK06145 195 VVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAVLAA-----------IERHRLTCAWMAPVMLSRVLTVPDRD---- 259 (497)
T ss_pred EecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHHHHH-----------HHHhCCeEEEehHHHHHHHHcCCCcc----
Confidence 9999999988865 56779999999883 33444444 99999999999999998887531100
Q ss_pred cchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccc
Q 006354 398 GGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQA 476 (649)
Q Consensus 398 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~ 476 (649)
....+++|.+++||+++++++.+.+.+.+ +.++++.
T Consensus 260 -------------------------------------------~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~ 296 (497)
T PRK06145 260 -------------------------------------------RFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDA 296 (497)
T ss_pred -------------------------------------------ccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEe
Confidence 00113799999999999999999998887 6889999
Q ss_pred cCcccccccccccCCC--CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhcc
Q 006354 477 YGLTETCAGSTFSEWD--DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKV 554 (649)
Q Consensus 477 YG~TE~~~~~~~~~~~--~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~ 554 (649)
||+||++..++..... ....+++|+|+++++++++| +++.. +++|+.|||+++|++++.||+++++.|++.|
T Consensus 297 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~---~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~-- 370 (497)
T PRK06145 297 YGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIAD-GAGRW---LPPNMKGEICMRGPKVTKGYWKDPEKTAEAF-- 370 (497)
T ss_pred ecCcccCCcceeccCccccccCCCcccCCCCceEEEEC-CCCCC---CCCCCceEEEEECcchhhhhcCChHHHHHHH--
Confidence 9999998866544322 22457899999999999998 44443 6788999999999999999999999999998
Q ss_pred CCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhh
Q 006354 555 DERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKI 629 (649)
Q Consensus 555 ~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~ 629 (649)
.+ +||+|||+|++++||+++++||.||+||+ +|++|+|.+||++|.++|+|. +++|++..++..++...+
T Consensus 371 -~~--~~~~TGDl~~~~~~g~l~~~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~-~~~v~~~~~~~~~~~~~~ 440 (497)
T PRK06145 371 -YG--DWFRSGDVGYLDEEGFLYLTDRKKDMIIS-GGENIASSEVERVIYELPEVA-EAAVIGVHDDRWGERITA 440 (497)
T ss_pred -hC--CCeeccceEEEcCCCcEEEeccccceEEe-CCeEECHHHHHHHHHhCCCee-EEEEEecCCCccCceEEE
Confidence 55 79999999999999999999999999997 599999999999999999999 999999988876654433
No 81
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=3.9e-57 Score=499.59 Aligned_cols=442 Identities=21% Similarity=0.267 Sum_probs=363.4
Q ss_pred CCHHHHHHHH-HHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 82 STMAALFEQS-CKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 82 ~tl~~~~~~~-a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
+...++++++ ++.+||++|+.. ++. .+||.||.++++++|++|.+.|+++|++|++
T Consensus 4 ~~~~~~~~~~~~~~~p~~~a~~~------------~~~-----------~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l 60 (508)
T TIGR02262 4 NAAEDLLDRNVVEGRGGKTAFID------------DIS-----------SLSYGELEAQVRRLGAALRRLGVKREERVLL 60 (508)
T ss_pred hHHHHHHHHHHhcccCCceEEEe------------CCc-----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 4667788877 677999999975 333 6999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|+++|+++++||+++|++++|+++.++.+++.++++.+++++++++.+..+.+.+.....+..+.++..+....
T Consensus 61 ~~~~~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 137 (508)
T TIGR02262 61 LMLDGVDFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEA--- 137 (508)
T ss_pred ECCCCHHHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCc---
Confidence 99999999999999999999999999999999999999999999999999888877777666677777776543211
Q ss_pred CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHH-HHhhCCCCCCCcE
Q 006354 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA-IKTLIPNPGRSDV 319 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~~~d~ 319 (649)
....+.++...... ...+....++++++|+|||||||.||||++||+++...+.. ....+ +++.+|+
T Consensus 138 ----------~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-~~~~~d~ 205 (508)
T TIGR02262 138 ----------GEVQLAELLATESE-QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTL-GIREDDV 205 (508)
T ss_pred ----------ccccHHHHhhcCCC-ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhc-CCCCCCE
Confidence 11234443332211 11223445789999999999999999999999999887766 34455 8889999
Q ss_pred EEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhc
Q 006354 320 YLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~ 398 (649)
+++.+|++|.+++.. ++.++..|+++++.+... + ...++..++++++|.+.++|.++..+......
T Consensus 206 ~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~--~-----~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~------ 272 (508)
T TIGR02262 206 VFSAAKLFFAYGLGNALTFPMSVGATTVLMGERP--T-----PDAVFDRLRRHQPTIFYGVPTLYAAMLADPNL------ 272 (508)
T ss_pred EEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCC--C-----HHHHHHHHHHHCCcEEecchHHHHHHhcCccc------
Confidence 999999999999865 566799999998843211 0 11233339999999999999988776542100
Q ss_pred chhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccC
Q 006354 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (649)
Q Consensus 399 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG 478 (649)
+....+++|.+++||+++++++.+.|.+.+++++++.||
T Consensus 273 -----------------------------------------~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG 311 (508)
T TIGR02262 273 -----------------------------------------PAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIG 311 (508)
T ss_pred -----------------------------------------cccccccceeEEEcCCCCCHHHHHHHHHHhCCchhhCcc
Confidence 000124799999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCc
Q 006354 479 LTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERG 558 (649)
Q Consensus 479 ~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~ 558 (649)
+||++.+++.....+...+++|+|++|++++|+| +++.. +++|..|||+|+|+.++.||+++++.+++.| .+
T Consensus 312 ~tE~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d-~~~~~---~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~---~~- 383 (508)
T TIGR02262 312 STEMLHIFLSNLPGDVRYGTSGKPVPGYRLRLVG-DGGQD---VAAGEPGELLISGPSSATMYWNNRAKTRDTF---QG- 383 (508)
T ss_pred ccccCceeecCCccCCCCCCcCCCCCCcEEEEEC-CCCCC---CCCCCeeEEEEecCccccccCCCHHHhHhhh---hc-
Confidence 9999876655444444567899999999999999 66544 6789999999999999999999999999988 55
Q ss_pred ccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccc
Q 006354 559 MCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASS 626 (649)
Q Consensus 559 ~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~ 626 (649)
+||+|||++++++||.++++||.||+||+. |++|+|.+||++|.++|+|. ++++++..+...++.
T Consensus 384 -~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~-G~~v~~~~ie~~l~~~~~v~-~~~~~~~~~~~~~~~ 448 (508)
T TIGR02262 384 -EWTRSGDKYVRNDDGSYTYAGRTDDMLKVS-GIYVSPFEIESALIQHPAVL-EAAVVGVEDEDGLIK 448 (508)
T ss_pred -CceeccceEEEcCCccEEEeccccceeeeC-CEEECHHHHHHHHHhCCCee-EEEEEeccccCCCce
Confidence 899999999999999999999999999985 99999999999999999999 999999876655443
No 82
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-57 Score=502.02 Aligned_cols=431 Identities=19% Similarity=0.252 Sum_probs=347.6
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHC-CCCCCCEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNF-GHNVDTRAA 159 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~-Gv~~gd~V~ 159 (649)
..++.++|++++. ++++|+.+ +++ .+||+||.++++++|++|+++ |++++++|+
T Consensus 4 ~~~~~~~l~~~a~--~~~~a~~~------------~~~-----------~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~ 58 (529)
T PRK07867 4 APTVAELLLPLAE--DDDRGLYF------------EDS-----------FTSWREHIRGSAARAAALRARLDPTRPPHVG 58 (529)
T ss_pred cccHHHHHHHhcc--cCCceEEE------------CCc-----------EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEE
Confidence 4589999988875 78999876 444 699999999999999999997 899999999
Q ss_pred EEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCc
Q 006354 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (649)
Q Consensus 160 i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~ 239 (649)
++++|+++++++++||+++|++++|+++.++++++.+++++++++++|++++....+..+. +.+. ++.++.
T Consensus 59 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~---~~~~-~~~~~~----- 129 (529)
T PRK07867 59 VLLDNTPEFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD---PGVR-VINVDS----- 129 (529)
T ss_pred EECCCCHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc---cCce-EEEecc-----
Confidence 9999999999999999999999999999999999999999999999999988776655432 1222 121111
Q ss_pred cCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcE
Q 006354 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (649)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~ 319 (649)
..+.++...............++++++|+|||||||.||||++||+++..........+ ++..+|+
T Consensus 130 -------------~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-~~~~~d~ 195 (529)
T PRK07867 130 -------------PAWADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF-GLGPDDV 195 (529)
T ss_pred -------------ccHHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-CCCcccE
Confidence 11333322211111222345678999999999999999999999999998888888888 8889999
Q ss_pred EEEccChHHHHHHHH-HHHHHHhCceEEe---CCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHH
Q 006354 320 YLAYLPLAHVLELAA-ESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVE 395 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~-~~~~l~~G~~l~~---~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 395 (649)
++..+|++|.+++.. ++.++..|+++++ +++..+.+. ++++++|++..+|+.+..++...... .
T Consensus 196 ~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-----------i~~~~vt~~~~~p~~~~~ll~~~~~~-~ 263 (529)
T PRK07867 196 CYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFLPD-----------VRRYGATYANYVGKPLSYVLATPERP-D 263 (529)
T ss_pred EEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHHHH-----------HHHhCCeEEeccHHHHHHHHhCCCcc-c
Confidence 999999999999876 5567999999988 344444444 89999999999999988775421100 0
Q ss_pred hhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCcccc
Q 006354 396 EKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQ 475 (649)
Q Consensus 396 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~ 475 (649)
...+++|. ++||+++++.. ..|.+.+|+++++
T Consensus 264 ----------------------------------------------~~~~~lr~-~~gg~~~~~~~-~~~~~~~g~~l~~ 295 (529)
T PRK07867 264 ----------------------------------------------DADNPLRI-VYGNEGAPGDI-ARFARRFGCVVVD 295 (529)
T ss_pred ----------------------------------------------ccccceEE-EecCCCChHHH-HHHHHHhCCcEEE
Confidence 00136784 56888888775 4556667999999
Q ss_pred ccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCC------------ccEEEE-cccccccccc
Q 006354 476 AYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMP------------RGEIVV-GGFNVTAGYF 542 (649)
Q Consensus 476 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~------------~GEl~v-~g~~v~~gY~ 542 (649)
.||+||++...+..+ ....+++|.|+++ ++++|++++.. ++.|+ .|||++ +|++++.||+
T Consensus 296 ~YG~TE~~~~~~~~~--~~~~~~~g~~~~~--~~i~~~~~~~~---~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~ 368 (529)
T PRK07867 296 GFGSTEGGVAITRTP--DTPPGALGPLPPG--VAIVDPDTGTE---CPPAEDADGRLLNADEAIGELVNTAGPGGFEGYY 368 (529)
T ss_pred eecccccccccccCC--CCCCCCcCCCCCC--EEEEECCCCCC---CCCCccccccccccCCcceEEEEecCCccccccc
Confidence 999999986655332 2345789999999 77888555543 66777 899999 9999999999
Q ss_pred CCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCC
Q 006354 543 NNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMK 622 (649)
Q Consensus 543 ~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~ 622 (649)
++++.|.+.| .+ |||+|||+|+++++|++++.||.||+||+ +|++|+|.|||++|.+||+|. +|+|+|.+++.
T Consensus 369 ~~~~~~~~~~---~~--g~~~TGD~~~~~~~g~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~-~~~V~g~~~~~ 441 (529)
T PRK07867 369 NDPEADAERM---RG--GVYWSGDLAYRDADGYAYFAGRLGDWMRV-DGENLGTAPIERILLRYPDAT-EVAVYAVPDPV 441 (529)
T ss_pred CChHhhhhhh---cC--CeEeeccEEEEeCCCcEEEeccccCeEEE-CCEEeCHHHHHHHHHhCCCee-EEEEEeccCCC
Confidence 9999999988 66 89999999999999999999999999998 699999999999999999999 99999999988
Q ss_pred cccchhhhhhh
Q 006354 623 LASSTKIFQSC 633 (649)
Q Consensus 623 ~~~~~~~~~~~ 633 (649)
.++.+.++..+
T Consensus 442 ~g~~~~a~vv~ 452 (529)
T PRK07867 442 VGDQVMAALVL 452 (529)
T ss_pred CCeeEEEEEEE
Confidence 88776555443
No 83
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=2.4e-57 Score=504.02 Aligned_cols=442 Identities=18% Similarity=0.251 Sum_probs=356.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..++.++|+++++ |+++|+++ +++ .+||+||.++++++|++|.+.|+++|++|++
T Consensus 24 ~~~~~~~~~~~a~--p~~~a~~~------------~~~-----------~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v 78 (536)
T PRK10946 24 DLPLTDILTRHAA--SDAIAVIC------------GER-----------QFSYRELNQASDNLACSLRRQGIKPGDTALV 78 (536)
T ss_pred CccHHHHHHHhhC--CCCeEEEe------------CCC-----------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 3689999999887 99999985 333 5999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhH-----HHHHHhhccCCCccEEEEecCC
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL-----KKLSAVSSSLKTIKNVIYFEND 235 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~l~~~~~~~~~~~~ii~~~~~ 235 (649)
+++|+++++++++||+++|++++++.+..+..++..+++++++++++++.+.. .....+....+.++.++..+..
T Consensus 79 ~~~n~~~~~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (536)
T PRK10946 79 QLGNVAEFYITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDD 158 (536)
T ss_pred ECCChHHHHHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCC
Confidence 99999999999999999999888777777788999999999999999986531 1222233334455555543221
Q ss_pred CCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCC
Q 006354 236 GSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPG 315 (649)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~ 315 (649)
....+.++...... ........++++++++|||||||.||||++||+++...+......+ .+.
T Consensus 159 ---------------~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~ 221 (536)
T PRK10946 159 ---------------GEHSLDDAINHPAE-DFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-GFT 221 (536)
T ss_pred ---------------CCccHHHHhhCccc-ccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc-CCC
Confidence 11223333332221 1122345678999999999999999999999999999998888887 889
Q ss_pred CCcEEEEccChHHHHHHHH--HHHHHHhCceEEeCC---cccccccchhhccCccccceeecceEEEechHHHHHHHHHH
Q 006354 316 RSDVYLAYLPLAHVLELAA--ESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGV 390 (649)
Q Consensus 316 ~~d~~l~~~pl~h~~~~~~--~~~~l~~G~~l~~~~---~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~ 390 (649)
.+|++++.+|++|.+++.. .+.++..|+++++.. +..+.+. ++++++|++.++|.++..+....
T Consensus 222 ~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------l~~~~~t~~~~~p~~~~~l~~~~ 290 (536)
T PRK10946 222 PQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAPDPSATLCFPL-----------IEKHQVNVTALVPPAVSLWLQAI 290 (536)
T ss_pred CCceEEEecCccccccchhhhHHHHhhcCcEEEECCCCCHHHHHHH-----------HHHhCCcEEEeChHHHHHHHhhh
Confidence 9999999999999888753 677899999998843 3333333 89999999999999999887643
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcC
Q 006354 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG 470 (649)
Q Consensus 391 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~ 470 (649)
...... ...+++|.+++||+++++++.+.+.+.++
T Consensus 291 ~~~~~~---------------------------------------------~~~~~l~~v~~gg~~l~~~~~~~~~~~~g 325 (536)
T PRK10946 291 AEGGSR---------------------------------------------AQLASLKLLQVGGARLSETLARRIPAELG 325 (536)
T ss_pred cccCcc---------------------------------------------ccccceeEEEECCCCCCHHHHHHHHHhcC
Confidence 211000 01148999999999999999999998889
Q ss_pred CccccccCcccccccccccCC-CCCCCCccCCCc-ccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccc
Q 006354 471 APIGQAYGLTETCAGSTFSEW-DDPSVGRVGPPV-PCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKT 548 (649)
Q Consensus 471 ~~l~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~-p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t 548 (649)
+++++.||+||++...+.... .....+++|+|+ |++.++|+| ++++. ++.|+.|||+|+|+.++.||+++++.|
T Consensus 326 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~---~~~g~~Gel~v~g~~~~~GY~~~~~~t 401 (536)
T PRK10946 326 CQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVAD-ADGNP---LPQGEVGRLMTRGPYTFRGYYKSPQHN 401 (536)
T ss_pred CeEEEeecccccceeeecCCCccccccccCCcccCCCceEEEEC-CCCCC---CCCCCccEEEEecCccchhhcCCcccc
Confidence 999999999997644432221 122357899998 899999998 55543 779999999999999999999999999
Q ss_pred hhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchh
Q 006354 549 SEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTK 628 (649)
Q Consensus 549 ~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~ 628 (649)
.+.|. .+ +||+|||+|++|+||++++.||.+|+||+ +|++|+|.+||++|.+||+|. +++|++.++...++...
T Consensus 402 ~~~~~--~d--~~~~TGDl~~~d~~G~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~-~~~v~~~~~~~~g~~~~ 475 (536)
T PRK10946 402 ASAFD--AN--GFYCSGDLVSIDPDGYITVVGREKDQINR-GGEKIAAEEIENLLLRHPAVI-HAALVSMEDELMGEKSC 475 (536)
T ss_pred hhhcc--cC--CceecCceEEECCCCcEEEeccccceeec-CCEEEcHHHHHHHHHhCCCcc-eEEEEcCCCcccCceEE
Confidence 99986 56 89999999999999999999999999997 599999999999999999999 99999999887765544
Q ss_pred hh
Q 006354 629 IF 630 (649)
Q Consensus 629 ~~ 630 (649)
++
T Consensus 476 a~ 477 (536)
T PRK10946 476 AF 477 (536)
T ss_pred EE
Confidence 43
No 84
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-57 Score=500.15 Aligned_cols=440 Identities=21% Similarity=0.226 Sum_probs=358.8
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..|+.++|.++++++|+++|+.+ +++ .+||+||.++++++|+.|.+.|+++|++|++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~------------~~~-----------~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i 67 (524)
T PRK06188 11 GATYGHLLVSALKRYPDRPALVL------------GDT-----------RLTYGQLADRISRYIQAFEALGLGTGDAVAL 67 (524)
T ss_pred CccHHHHHHHHHHHCCCCeEEEE------------CCC-----------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 35899999999999999999986 333 6999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch-hHHHHHHhhccCCCccEEEEecCCCCCc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK-QLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~l~~~~~~~~~~~~ii~~~~~~~~~ 239 (649)
+++|+++++++++||+++|++++|++|..+.+++.++++.++++.++++.. ....+.......+.+..++.+.....
T Consensus 68 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 145 (524)
T PRK06188 68 LSLNRPEVLMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPD-- 145 (524)
T ss_pred ECCCCHHHHHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccc--
Confidence 999999999999999999999999999999999999999999999999876 44444444444444555554432210
Q ss_pred cCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcE
Q 006354 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (649)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~ 319 (649)
...+.+....... ........++++++|+|||||||.||+|++||+++.+.+......+ .+..+|+
T Consensus 146 ------------~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~-~~~~~~~ 211 (524)
T PRK06188 146 ------------GVDLLAAAAKFGP-APLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW-EWPADPR 211 (524)
T ss_pred ------------hhhHHHhhhccCc-ccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CCCcCcE
Confidence 0001111110001 1111223456799999999999999999999999999998888888 8899999
Q ss_pred EEEccChHHHHHHHHHHHHHHhCceEEeCC---cccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHh
Q 006354 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEE 396 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~---~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~ 396 (649)
+++.+|++|..++. .+.+++.|+++++.+ +..+.+. ++++++|+++.+|+++..+.+.....
T Consensus 212 ~l~~~pl~~~~g~~-~~~~l~~G~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~l~~l~~~~~~~--- 276 (524)
T PRK06188 212 FLMCTPLSHAGGAF-FLPTLLRGGTVIVLAKFDPAEVLRA-----------IEEQRITATFLVPTMIYALLDHPDLR--- 276 (524)
T ss_pred EEEecCchhhhhHH-HHHHHHcCCEEEEcCCCCHHHHHHH-----------HHHhCCEEEEehHHHHHHHHhCcCcc---
Confidence 99999999988875 567799999999944 3334444 99999999999999999887632110
Q ss_pred hcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccc
Q 006354 397 KGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQA 476 (649)
Q Consensus 397 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~ 476 (649)
....+++|.+++||++++++..+.+.+.++..+++.
T Consensus 277 --------------------------------------------~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 312 (524)
T PRK06188 277 --------------------------------------------TRDLSSLETVYYGASPMSPVRLAEAIERFGPIFAQY 312 (524)
T ss_pred --------------------------------------------CCCCcceeEEEEcCCCCCHHHHHHHHHHhCchhhhe
Confidence 011248999999999999998888877789999999
Q ss_pred cCcccccccccccCCCC------CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchh
Q 006354 477 YGLTETCAGSTFSEWDD------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSE 550 (649)
Q Consensus 477 YG~TE~~~~~~~~~~~~------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~ 550 (649)
||+||++..++...... ....++|+|+|+++++|+| +++.. ++.|+.|||+|+|+.++.||+++++.+..
T Consensus 313 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~~~---~~~g~~Gel~v~~~~~~~gy~~~~~~~~~ 388 (524)
T PRK06188 313 YGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDGRE---VAQGEVGEICVRGPLVMDGYWNRPEETAE 388 (524)
T ss_pred eCccccCCceeecCchhccccccccCCccccccCCcEEEEEc-CCCCC---CCCCCeeEEEEECcchhhhhcCChHHhhh
Confidence 99999976665443322 2457899999999999999 44443 67899999999999999999999999998
Q ss_pred hhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhh
Q 006354 551 VYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKI 629 (649)
Q Consensus 551 ~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~ 629 (649)
.| .+ |||+|||+|++++||.+++.||.+|+||+ +|++|+|.+||++|.+||+|. +++|++.+++..++...+
T Consensus 389 ~~---~~--g~~~TGDl~~~~~~g~~~~~GR~~~~i~~-~G~~i~~~~IE~~l~~~~~v~-~~~v~~~~~~~~~~~~~~ 460 (524)
T PRK06188 389 AF---RD--GWLHTGDVAREDEDGFYYIVDRKKDMIVT-GGFNVFPREVEDVLAEHPAVA-QVAVIGVPDEKWGEAVTA 460 (524)
T ss_pred hh---cC--CceeecceEEEcCCccEEEEeccccceec-CCEEECHHHHHHHHHhCCCee-EEEEEeccCCCcCceEEE
Confidence 88 56 89999999999999999999999999997 599999999999999999999 999999988776654443
No 85
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-57 Score=503.14 Aligned_cols=426 Identities=19% Similarity=0.259 Sum_probs=338.4
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCC-CCCCEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGH-NVDTRAAI 160 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv-~~gd~V~i 160 (649)
.|+.++|.+++ .|+++|+.+ ++. .+||+||.++++++|.+|.++|+ ++||+|++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~------------~~~-----------~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i 57 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRY------------GDR-----------TWTWREVLAEAAARAAALIALADPDRPLHVGV 57 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 57889998764 799999976 333 69999999999999999999999 89999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|+++++++++||+++|++++|++|.++.+++.+++++++++++|++.+....+.++. .+.++.+ .++..
T Consensus 58 ~~~n~~~~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~~~~~~i-~~~~~----- 129 (540)
T PRK13388 58 LLGNTPEMLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--LPGVRVL-DVDTP----- 129 (540)
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--ccCceEE-Eccch-----
Confidence 999999999999999999999999999999999999999999999999988776655431 2233322 22210
Q ss_pred CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEE
Q 006354 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVY 320 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~ 320 (649)
.+.++...... ..+.....++++++|+|||||||.||||+++|+++...+......+ ++..+|++
T Consensus 130 -------------~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~ 194 (540)
T PRK13388 130 -------------AYAELVAAAGA-LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF-GLTRDDVC 194 (540)
T ss_pred -------------hhhhhhccccC-cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh-CCCCCCEE
Confidence 12222211111 1112235679999999999999999999999999998888888888 89999999
Q ss_pred EEccChHHHHHHHHHH-HHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHh
Q 006354 321 LAYLPLAHVLELAAES-IMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEE 396 (649)
Q Consensus 321 l~~~pl~h~~~~~~~~-~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~ 396 (649)
++.+|++|..++...+ .++..|+++++. ++..+.+. ++++++|++..+|..+..+....... .
T Consensus 195 l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~-----------i~~~~vt~~~~~p~~l~~l~~~~~~~-~- 261 (540)
T PRK13388 195 YVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASGFLDD-----------VRRYGATYFNYVGKPLAYILATPERP-D- 261 (540)
T ss_pred EEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHHHHHH-----------HHHhCCeEEEehHHHHHHHHhCCCCc-c-
Confidence 9999999999887644 579999999884 33344444 99999999999999988776421000 0
Q ss_pred hcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccc
Q 006354 397 KGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQA 476 (649)
Q Consensus 397 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~ 476 (649)
....+++.+ + |++++++..+.+.+.+++++++.
T Consensus 262 ---------------------------------------------~~~~~l~~~-~-G~~~~~~~~~~~~~~~~~~l~~~ 294 (540)
T PRK13388 262 ---------------------------------------------DADNPLRVA-F-GNEASPRDIAEFSRRFGCQVEDG 294 (540)
T ss_pred ---------------------------------------------ccccceEEE-E-CCCCCHHHHHHHHHHhCCceecc
Confidence 000256643 3 56677888888888889999999
Q ss_pred cCcccccccccccCCCCCCCCccCCCcccceEE-----------EEecCCCCcccCCCCCCccEEEEc-cccccccccCC
Q 006354 477 YGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIK-----------LVSWDEGGYKTSDKPMPRGEIVVG-GFNVTAGYFNN 544 (649)
Q Consensus 477 YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~-----------i~d~~~~~~~~~~~~g~~GEl~v~-g~~v~~gY~~~ 544 (649)
||+||++.+++... ....+++|+|++|++++ ++| +++... .+.+..|||+++ |++++.||+++
T Consensus 295 YG~tE~~~~~~~~~--~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~--~~~~~~GEl~v~~g~~~~~gY~~~ 369 (540)
T PRK13388 295 YGSSEGAVIVVREP--GTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALL--NADEAIGELVNTAGAGFFEGYYNN 369 (540)
T ss_pred cccccccceeecCC--CCCCCCCCCCCCCcEEEcCCCCccccceecc-Cccccc--cCCCcceEEEEecCCcccccccCC
Confidence 99999987665432 23457999999997653 222 122111 134678999998 99999999999
Q ss_pred CccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcc
Q 006354 545 PGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLA 624 (649)
Q Consensus 545 ~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~ 624 (649)
|+.|++.| .+ |||+|||+|++++||+++++||+||+||+ +|++|+|.+||++|.+||+|. +|+|+|.+++..|
T Consensus 370 ~~~t~~~~---~~--g~~~TGD~~~~~~dg~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~~~V~-~~~v~g~~~~~~g 442 (540)
T PRK13388 370 PEATAERM---RH--GMYWSGDLAYRDADGWIYFAGRTADWMRV-DGENLSAAPIERILLRHPAIN-RVAVYAVPDERVG 442 (540)
T ss_pred hHHHHHHh---hc--CceeccceEEEcCCCcEEEeccCCceEEE-CCEEeCHHHHHHHHHhCCCce-EEEEEEccCCCCC
Confidence 99999998 56 89999999999999999999999999998 599999999999999999999 9999999988777
Q ss_pred cch
Q 006354 625 SST 627 (649)
Q Consensus 625 ~~~ 627 (649)
+.+
T Consensus 443 ~~~ 445 (540)
T PRK13388 443 DQV 445 (540)
T ss_pred cee
Confidence 554
No 86
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-56 Score=499.90 Aligned_cols=456 Identities=20% Similarity=0.256 Sum_probs=357.6
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.|+.++|+++++++|++++++... +| ..+.+||+||.++++++|++|++.|+++||+|+++
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~~~----------~~---------~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~ 70 (542)
T PRK06018 10 LLCHRIIDHAARIHGNREVVTRSV----------EG---------PIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATI 70 (542)
T ss_pred CCHHHHHHHHHHhCCCceEEEeec----------cC---------CceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 599999999999999999997421 22 23479999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|++++|++|.++.+++.++++.+++++++++.+..+.+.++....+.++.++.+.+......
T Consensus 71 ~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 149 (542)
T PRK06018 71 AWNTWRHLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQ- 149 (542)
T ss_pred cCCchHHHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccc-
Confidence 9999999999999999999999999999999999999999999999999888888777666666777666543321100
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHH-HHH-HHHHhhCCCCCCCcE
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIV-ATA-AAIKTLIPNPGRSDV 319 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~-~~~-~~~~~~~~~~~~~d~ 319 (649)
........+.++...... ........++++++|+|||||||.||||++||++.+ ... ......+ ++..+|+
T Consensus 150 -----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~-~~~~~d~ 222 (542)
T PRK06018 150 -----TTLKNAVAYEEWIAEADG-DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL-GTSAADT 222 (542)
T ss_pred -----cCccccccHHHHhccCCc-ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc-CCCCCCE
Confidence 000123345555443321 111234466889999999999999999999999743 222 2233445 7889999
Q ss_pred EEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcc
Q 006354 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~ 399 (649)
++..+|++|.+++...+.++..|+++++.... .+ ...++..++++++|++.++|+++..+........
T Consensus 223 ~~~~~p~~h~~~~~~~~~~~~~g~~~v~~~~~--~~-----~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~----- 290 (542)
T PRK06018 223 MLPVVPLFHANSWGIAFSAPSMGTKLVMPGAK--LD-----GASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEG----- 290 (542)
T ss_pred EEEecCHHHHhhhHHHHhhhhcCceEEccCcC--CC-----HHHHHHHHHhcCCceeecCcHHHHHHHhcccccC-----
Confidence 99999999999988777889999999874211 01 1112333899999999999999998876422100
Q ss_pred hhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCc
Q 006354 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGL 479 (649)
Q Consensus 400 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~ 479 (649)
...++||.+++||+++++++.+.|++ +++++++.||+
T Consensus 291 ------------------------------------------~~~~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~ 327 (542)
T PRK06018 291 ------------------------------------------LKLPHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGM 327 (542)
T ss_pred ------------------------------------------CCcccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecc
Confidence 01147999999999999999999999 89999999999
Q ss_pred ccccccccccCCCC-----------CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccc
Q 006354 480 TETCAGSTFSEWDD-----------PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKT 548 (649)
Q Consensus 480 TE~~~~~~~~~~~~-----------~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t 548 (649)
||++.+++...... ....++|+|.++++++|+| +++...+ ++.+..|||+++|++++.||+++ +
T Consensus 328 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~-~~~~~~Gel~i~g~~~~~gy~~~---~ 402 (542)
T PRK06018 328 TEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITD-DAGKELP-WDGKTFGRLKVRGPAVAAAYYRV---D 402 (542)
T ss_pred cccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEEC-CCCCCCC-CCCCceeEEEEecCCcchhhhcC---c
Confidence 99987765432111 1135789999999999999 4554422 22236899999999999999983 2
Q ss_pred hhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchh
Q 006354 549 SEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTK 628 (649)
Q Consensus 549 ~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~ 628 (649)
...+. .+ +||+|||++++++||++++.||.||+||+ +|++|+|.+||+++.+||.|. +|+|++.+++..++...
T Consensus 403 ~~~~~--~~--~~~~TGDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~-~~~v~~~~~~~~~~~~~ 476 (542)
T PRK06018 403 GEILD--DD--GFFDTGDVATIDAYGYMRITDRSKDVIKS-GGEWISSIDLENLAVGHPKVA-EAAVIGVYHPKWDERPL 476 (542)
T ss_pred ccEec--CC--cEEEcCCEEEEcCCccEEEEecCCCeEEE-CCEEECHHHHHHHHHhCCcce-eEEEEeccCCCcCceeE
Confidence 23332 44 89999999999999999999999999996 699999999999999999999 99999998877665444
Q ss_pred hh
Q 006354 629 IF 630 (649)
Q Consensus 629 ~~ 630 (649)
++
T Consensus 477 ~~ 478 (542)
T PRK06018 477 LI 478 (542)
T ss_pred EE
Confidence 43
No 87
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.7e-56 Score=498.06 Aligned_cols=454 Identities=24% Similarity=0.309 Sum_probs=353.2
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..|+.++|+++++++|+++|+.+ +++ .+||.||.++++++|++|.++|+.+||+|++
T Consensus 20 ~~~~~~~~~~~~~~~p~~~a~~~------------~~~-----------~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i 76 (541)
T TIGR03205 20 RGTLPDLLSKAAADYGPRPALEF------------RDR-----------PITYTELEAMAETAAAALLRAGYGKDASVAL 76 (541)
T ss_pred CCCHHHHHHHHHHHcCCCceEEE------------CCc-----------EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 35899999999999999999986 333 6999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchh--HHHHHHhhccCCCccEEEEecCCCCC
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ--LKKLSAVSSSLKTIKNVIYFENDGSE 238 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~l~~~~~~~~~~~~ii~~~~~~~~ 238 (649)
+++|+++++++++||+++|++++|++|.++.+++.+++++++++++|+++.. .+.+.+.... ..+..+++++.....
T Consensus 77 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 155 (541)
T TIGR03205 77 YLGNTPDHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK-GLLDRLIVCEDDNWG 155 (541)
T ss_pred ECCCChHHHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc-ccceEEEEecccccc
Confidence 9999999999999999999999999999999999999999999999998632 2222222111 123344444332110
Q ss_pred c-cCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC-----C
Q 006354 239 K-DSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI-----P 312 (649)
Q Consensus 239 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~-----~ 312 (649)
. .......+......+++++....... .......++++++++|||||||.||||+++|+++.+..... ..+ .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~ 233 (541)
T TIGR03205 156 KVGTPQAPIPADPRIVTYADFVKGAAAP-AEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRA 233 (541)
T ss_pred cccccccccCCCcccccHHHHHhcCCCC-CCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-Hhhcccccc
Confidence 0 00000011122345566665432221 11234567899999999999999999999999987655432 211 0
Q ss_pred CCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCC---cccccccchhhccCccccceeecceEEEechHHHHHHHH
Q 006354 313 NPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVRE 388 (649)
Q Consensus 313 ~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~---~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~ 388 (649)
.....+++++.+|++|.+++.. ++.++..|+++++.+ +..+.+. ++++++|++.++|+++..+..
T Consensus 234 ~~~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~~~~l~~ 302 (541)
T TIGR03205 234 TRGDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRD-----------IEEKRATVFPGVPTMWIALAN 302 (541)
T ss_pred cCCCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHH-----------HHHcCCeEeechHHHHHHHHh
Confidence 2234578999999999988766 567889999988743 3333333 999999999999999988764
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhh
Q 006354 389 GVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINIC 468 (649)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~ 468 (649)
.... +....+++|.+++||+++++++.+++++.
T Consensus 303 ~~~~-----------------------------------------------~~~~~~~l~~i~~gg~~~~~~~~~~~~~~ 335 (541)
T TIGR03205 303 DPSL-----------------------------------------------EKRDLSSLATIGSGGAPLPVEVANFFERK 335 (541)
T ss_pred Cccc-----------------------------------------------cccCccccceEEEccccCCHHHHHHHHHH
Confidence 2100 00011379999999999999999999888
Q ss_pred cCCccccccCcccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCcc
Q 006354 469 MGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGK 547 (649)
Q Consensus 469 ~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~ 547 (649)
++.++++.||+||++.+++..... ....+++|.|++++.++|++.++.+. .++.|+.|||+++|++++.||+++|+.
T Consensus 336 ~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~ 413 (541)
T TIGR03205 336 TGLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPTK--VLPPGEVGELRIRGPNVTRGYWNRPEE 413 (541)
T ss_pred hCCCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCCc--cCCCCCeeEEEEecCCccccccCChhh
Confidence 899999999999998776654332 23457899999999999876443332 267899999999999999999999999
Q ss_pred chhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccch
Q 006354 548 TSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASST 627 (649)
Q Consensus 548 t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~ 627 (649)
|++.| .+ +||+|||++++++||+++++||.||+||+ +|++|+|.+||+++.+||.|. +++|++..+...++..
T Consensus 414 ~~~~~---~~--~~~~TGD~~~~~~~g~l~i~GR~~~~i~~-~G~~i~~~eIE~~l~~~~~v~-~~~v~~~~~~~~~~~~ 486 (541)
T TIGR03205 414 SAEAF---VG--DRFLTGDIGYMDTDGYFFLVDRKKDMIIS-GGFNVYPQMIEQAIYEHPGVQ-EVIVIGIPDQYRGEAA 486 (541)
T ss_pred hHhhh---cc--CCcccCceEEEcCCceEEEEccccCeEEE-CCEEECHHHHHHHHHhCCCee-eEEEEecCCcccCceE
Confidence 99998 55 79999999999999999999999999997 599999999999999999999 9999998877655433
No 88
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-57 Score=508.49 Aligned_cols=468 Identities=20% Similarity=0.246 Sum_probs=354.2
Q ss_pred ccCCCCCCCCCCccccccCCCCcccccCCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCce
Q 006354 50 QRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYE 129 (649)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~ 129 (649)
+..++...+.....+..... ..........|+.++|.++++++|+++|+++ +++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~tl~~~l~~~a~~~p~~~Ai~~------------~~~----------- 61 (600)
T PRK08279 8 AARLPRRLPDLPGILRGLKR---TALITPDSKRSLGDVFEEAAARHPDRPALLF------------EDQ----------- 61 (600)
T ss_pred eccccccCCchhHHHhhhhh---hcccCCCCcccHHHHHHHHHHhCCCCcEEEe------------CCC-----------
Confidence 34444444555544443333 1111223346999999999999999999986 333
Q ss_pred EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEEC
Q 006354 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD 209 (649)
Q Consensus 130 ~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (649)
.+||+||.++++++|++|++.|+++||+|+|+++|+++++++++||+++|++++|+++.++.+++.+++++++++++|++
T Consensus 62 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~ 141 (600)
T PRK08279 62 SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVG 141 (600)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEC
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCC----CCCCCCCCCCCeEEEEeecC
Q 006354 210 SKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRS----PVDPSLPSQNGVAVIMYTSG 285 (649)
Q Consensus 210 ~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSG 285 (649)
.+..+.+............++..++... . ....+.++....... .........+++++|+||||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSG 209 (600)
T PRK08279 142 EELVEAFEEARADLARPPRLWVAGGDTL-D-----------DPEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSG 209 (600)
T ss_pred hHHHHHHHHHhhhhcccceEEEecCccc-c-----------ccccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCC
Confidence 9888777665544433333333322110 0 012233333221111 11123346789999999999
Q ss_pred CCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHHHH-HHHHhCceEEeCC---cccccccchhhc
Q 006354 286 STGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAES-IMLCAGCAIGYGS---TLTMTDTSSKIK 361 (649)
Q Consensus 286 STG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~-~~l~~G~~l~~~~---~~~l~~~~~~~~ 361 (649)
|||.||||++||+++++.+.+....+ .+.++|++++.+|++|.+++...+ .++..|+++++.+ +..+.+.
T Consensus 210 TTG~PKgV~~sh~~l~~~~~~~~~~~-~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~----- 283 (600)
T PRK08279 210 TTGLPKAAVMSHMRWLKAMGGFGGLL-RLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRRKFSASRFWDD----- 283 (600)
T ss_pred CCCCCcEEEEeHHHHHHHHHHHHHhc-CCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHHH-----
Confidence 99999999999999999999988887 899999999999999999988744 5688888888843 3333333
Q ss_pred cCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHH
Q 006354 362 KGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRA 441 (649)
Q Consensus 362 ~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (649)
++++++|++.++|++++.+.........
T Consensus 284 ------i~~~~~t~~~~~p~l~~~l~~~~~~~~~---------------------------------------------- 311 (600)
T PRK08279 284 ------VRRYRATAFQYIGELCRYLLNQPPKPTD---------------------------------------------- 311 (600)
T ss_pred ------HHHhcceEEeehHHHHHHHHhCCCCccc----------------------------------------------
Confidence 8999999999999999887653110000
Q ss_pred HhCCceEEEEecCCCCCHHHHHHHHhhcCC-ccccccCcccccccccccCCCCCCCCccCCCcc----cceEEEEecCCC
Q 006354 442 VLGGRIRFMICGGAPLSADSQRFINICMGA-PIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVP----CCYIKLVSWDEG 516 (649)
Q Consensus 442 ~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~-~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p----~~~v~i~d~~~~ 516 (649)
...++|.+ +|+++++++.+.|.+.++. .+++.||+||++...+.. ....+++|.+.+ +..+...+.+.+
T Consensus 312 -~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 385 (600)
T PRK08279 312 -RDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV---FNFDGTVGRVPLWLAHPYAIVKYDVDTG 385 (600)
T ss_pred -cCcceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc---CCCCcccccccccccccceeeeeccCcC
Confidence 01367754 4788999999999988875 599999999987643322 234467777655 333332221111
Q ss_pred -------CcccCCCCCCccEEE--EccccccccccCCCccchhhhccC--CCcccceeeCcEEEEccCCeEEEEecCCCe
Q 006354 517 -------GYKTSDKPMPRGEIV--VGGFNVTAGYFNNPGKTSEVYKVD--ERGMCWFYTGDIGQVYPDGCLEIIDRKKDI 585 (649)
Q Consensus 517 -------~~~~~~~~g~~GEl~--v~g~~v~~gY~~~~~~t~~~f~~~--~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~ 585 (649)
+....+++|+.|||+ |+|++++.|| ++++.|++.|..+ .++.+||+|||+|++++||++++.||.||+
T Consensus 386 ~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ 464 (600)
T PRK08279 386 EPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDT 464 (600)
T ss_pred ceeeCCCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCe
Confidence 112237889999998 7899999999 9999999887532 234489999999999999999999999999
Q ss_pred EEcCCceeeeCChhhhHhccCcccccceEEEecCCCC
Q 006354 586 VKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMK 622 (649)
Q Consensus 586 iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~ 622 (649)
||+ +|++|+|.|||++|.+||+|. +|+|+|.+++.
T Consensus 465 ik~-~G~~i~p~eIE~~l~~~p~V~-~a~v~gv~~~~ 499 (600)
T PRK08279 465 FRW-KGENVATTEVENALSGFPGVE-EAVVYGVEVPG 499 (600)
T ss_pred EEE-CCcccCHHHHHHHHhcCCCcc-eEEEEEeecCC
Confidence 998 599999999999999999999 99999987543
No 89
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1e-56 Score=501.59 Aligned_cols=460 Identities=22% Similarity=0.307 Sum_probs=358.5
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..++.++|.++++++|+++|+.+ ++. .+||+||.++++++|+.|.+.|+++||+|++
T Consensus 22 ~~~i~~~l~~~a~~~p~~~a~~~------------~~~-----------~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i 78 (557)
T PRK07059 22 YPSLADLLEESFRQYADRPAFIC------------MGK-----------AITYGELDELSRALAAWLQSRGLAKGARVAI 78 (557)
T ss_pred CCCHHHHHHHHHHHcCCCceEEE------------cCc-----------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 36899999999999999999986 333 6999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|+++++++++||+++|++++|++|.++.+++.+++++++++++|+++.....+..+.... ..+.++..........
T Consensus 79 ~~~n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 157 (557)
T PRK07059 79 MMPNVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKT-AVKHVVVASMGDLLGF 157 (557)
T ss_pred ECCCCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhccc-CCceeEEecccccccc
Confidence 999999999999999999999999999999999999999999999999987766665544322 2334433321110000
Q ss_pred CC-------------CCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHH
Q 006354 241 SG-------------VSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAI 307 (649)
Q Consensus 241 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~ 307 (649)
.. ...+ .......+++................++++|+|+|||||||.||||+++|++++..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~ 236 (557)
T PRK07059 158 KGHIVNFVVRRVKKMVPAW-SLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQM 236 (557)
T ss_pred ccccccccccccccccccc-CCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHH
Confidence 00 0000 001223455555443333333345678999999999999999999999999998766543
Q ss_pred HhhCC---CC---CCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCC-cccccccchhhccCccccceeecceEEEec
Q 006354 308 KTLIP---NP---GRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGS-TLTMTDTSSKIKKGTKGDVSVLKPTLMAAV 379 (649)
Q Consensus 308 ~~~~~---~~---~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~-~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~ 379 (649)
...+. .. .....+++.+|++|.+++.. .+.++..|++.++.+ +... ..++..++++++|.+.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~i~~~~vt~~~~~ 308 (557)
T PRK07059 237 EAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDI--------PGFIKELKKYQVHIFPAV 308 (557)
T ss_pred hhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCH--------HHHHHHHHHhCCeeeecC
Confidence 32220 11 12457888999999988754 556778888876632 2111 112333899999999999
Q ss_pred hHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCH
Q 006354 380 PAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSA 459 (649)
Q Consensus 380 P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~ 459 (649)
|.++..+...... .....+++|.++.||+++++
T Consensus 309 p~~~~~l~~~~~~-----------------------------------------------~~~~~~~l~~~~~gg~~~~~ 341 (557)
T PRK07059 309 NTLYNALLNNPDF-----------------------------------------------DKLDFSKLIVANGGGMAVQR 341 (557)
T ss_pred HHHHHHHHcCcCc-----------------------------------------------CcCCchhheEEEeccccCCH
Confidence 9999988653110 00011378999999999999
Q ss_pred HHHHHHHhhcCCccccccCcccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcccccc
Q 006354 460 DSQRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVT 538 (649)
Q Consensus 460 ~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~ 538 (649)
.+.+.|.+.+++++++.||+||++.+++..... ....+++|.|+++++++|+| ++++. +++|+.|||+|+|+.++
T Consensus 342 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~~---~~~g~~Gel~v~g~~~~ 417 (557)
T PRK07059 342 PVAERWLEMTGCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPSTEVSIRD-DDGND---LPLGEPGEICIRGPQVM 417 (557)
T ss_pred HHHHHHHHHhCCCeeeccccccccchhhcCCCCCCCcCCcccCccCCcEEEEEC-CCCCC---CCCCCceEEEEeCCccc
Confidence 999999988899999999999998877655433 23457999999999999998 55543 78899999999999999
Q ss_pred ccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEec
Q 006354 539 AGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRN 618 (649)
Q Consensus 539 ~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~ 618 (649)
.||+++++.|.+.|. .+ |||+|||+|++++||.++++||++|+||+ +|++|+|.+||++|.+||+|. +++|++.
T Consensus 418 ~gY~~~~~~~~~~~~--~~--g~~~TGDl~~~~~~g~~~~~GR~~~~i~~-~G~~i~p~~iE~~l~~~~~V~-~~~v~~~ 491 (557)
T PRK07059 418 AGYWNRPDETAKVMT--AD--GFFRTGDVGVMDERGYTKIVDRKKDMILV-SGFNVYPNEIEEVVASHPGVL-EVAAVGV 491 (557)
T ss_pred hhhhcCHHHHhhhcc--cC--CceecCcEEEEcCCCcEEEecccccceEE-CCEEEcHHHHHHHHHhCCcee-EEEEEec
Confidence 999999999998886 55 89999999999999999999999999998 599999999999999999999 9999998
Q ss_pred CCCCcccchhhh
Q 006354 619 GPMKLASSTKIF 630 (649)
Q Consensus 619 ~~~~~~~~~~~~ 630 (649)
.+...++...++
T Consensus 492 ~~~~~ge~~~~~ 503 (557)
T PRK07059 492 PDEHSGEAVKLF 503 (557)
T ss_pred ccCCCCeeEEEE
Confidence 887766544443
No 90
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.7e-56 Score=500.45 Aligned_cols=451 Identities=20% Similarity=0.246 Sum_probs=347.8
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.+++++|+..++.+|+++|+.+ ++. .+||+||.++++++|.+|.+.|+++||+|+++
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~------------~~~-----------~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~ 76 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVH------------GSV-----------RYTWAQTYQRCRRLASALAKRSIGPGSTVAVI 76 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 5799999999999999999975 332 58999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCC-------CccEEEEecC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLK-------TIKNVIYFEN 234 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~-------~~~~ii~~~~ 234 (649)
++|+++++++++||+++|++++|+++.++.+++.+++++++++++|+++...+....+..... ....++.++.
T Consensus 77 ~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (567)
T PLN02479 77 APNIPAMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGD 156 (567)
T ss_pred CCCcHHHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecC
Confidence 999999999999999999999999999999999999999999999999887665544332111 1223444432
Q ss_pred CCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCC
Q 006354 235 DGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP 314 (649)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~ 314 (649)
..... ...... .......+.++................++.++++|||||||.||||++||+++..........+ .+
T Consensus 157 ~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~ 233 (567)
T PLN02479 157 PTCDP-KSLQYA-LGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW-GM 233 (567)
T ss_pred CcCCc-cccccc-cccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc-CC
Confidence 21100 000000 0112335666554322111111223345778899999999999999999999887666666666 78
Q ss_pred CCCcEEEEccChHHHHHHHHHHH-HHHhCceEEe--CCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHH
Q 006354 315 GRSDVYLAYLPLAHVLELAAESI-MLCAGCAIGY--GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (649)
Q Consensus 315 ~~~d~~l~~~pl~h~~~~~~~~~-~l~~G~~l~~--~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 391 (649)
++++++++.+|++|..++...+. .+..|.++++ +++..+.+. ++++++|++.++|.+++.+.....
T Consensus 234 ~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----------l~~~~~t~~~~~P~~~~~l~~~~~ 302 (567)
T PLN02479 234 NEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICLRQVTAKAIYSA-----------IANYGVTHFCAAPVVLNTIVNAPK 302 (567)
T ss_pred CCCCEEEEecchhhhhhHHHHHHHHhhcCceEeccCCCHHHHHHH-----------HHHcCCeEEEecHHHHHHHHhhhh
Confidence 88999999999999998766543 4566666655 344444444 999999999999999998876421
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCC
Q 006354 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA 471 (649)
Q Consensus 392 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~ 471 (649)
.... ...++++.++++|+++++.+.+.|++. +.
T Consensus 303 ~~~~----------------------------------------------~~~~~l~~~~~~G~~~~~~~~~~~~~~-~~ 335 (567)
T PLN02479 303 SETI----------------------------------------------LPLPRVVHVMTAGAAPPPSVLFAMSEK-GF 335 (567)
T ss_pred hccc----------------------------------------------ccccceeEEEEcCCCCCHHHHHHHHhc-CC
Confidence 1000 011478999999999999999988875 89
Q ss_pred ccccccCcccccccccccCC---------C-CCC-CCccCCCcccce-EEEEecCCCCcccCCCCC--CccEEEEccccc
Q 006354 472 PIGQAYGLTETCAGSTFSEW---------D-DPS-VGRVGPPVPCCY-IKLVSWDEGGYKTSDKPM--PRGEIVVGGFNV 537 (649)
Q Consensus 472 ~l~~~YG~TE~~~~~~~~~~---------~-~~~-~~~vG~p~p~~~-v~i~d~~~~~~~~~~~~g--~~GEl~v~g~~v 537 (649)
++++.||+||+++.++.... . ... ...+|.+.++++ ++|+|++++.. ++.+ ++|||+++|+++
T Consensus 336 ~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~---~~~~g~~~GEl~v~g~~~ 412 (567)
T PLN02479 336 RVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKP---VPADGKTMGEIVMRGNMV 412 (567)
T ss_pred ceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcc---cCCCCCCceEEEEeccch
Confidence 99999999998654432210 0 001 145788888886 88988655544 4432 689999999999
Q ss_pred cccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEe
Q 006354 538 TAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWR 617 (649)
Q Consensus 538 ~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g 617 (649)
+.|||++|+.|++.| .+ +||+|||+|+++++|+++++||.||+||+ +|++|+|.+||++|.+||.|. +|+|++
T Consensus 413 ~~GY~~~~~~t~~~~---~~--g~~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~-~~~v~~ 485 (567)
T PLN02479 413 MKGYLKNPKANEEAF---AN--GWFHSGDLGVKHPDGYIEIKDRSKDIIIS-GGENISSLEVENVVYTHPAVL-EASVVA 485 (567)
T ss_pred hhhhhcCcccccchh---cC--CceecceeEEEcCCccEEEeccccceEEe-CCEEEcHHHHHHHHHhCcccc-eeeEEe
Confidence 999999999999999 56 89999999999999999999999999997 599999999999999999999 999999
Q ss_pred cCCCCcccc
Q 006354 618 NGPMKLASS 626 (649)
Q Consensus 618 ~~~~~~~~~ 626 (649)
..+...++.
T Consensus 486 ~~~~~~~~~ 494 (567)
T PLN02479 486 RPDERWGES 494 (567)
T ss_pred ccchhcCce
Confidence 987664443
No 91
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=3.9e-57 Score=486.97 Aligned_cols=406 Identities=32% Similarity=0.508 Sum_probs=318.2
Q ss_pred HHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH
Q 006354 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE 167 (649)
Q Consensus 88 ~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~ 167 (649)
|+++|+++||++|+++ + ++ +++||+||.++++++|..|+++|+++||+|+|+++|+++
T Consensus 1 f~~~a~~~pd~~a~~~-~----------~~-----------~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~ 58 (417)
T PF00501_consen 1 FERQAQRYPDRIALID-D----------EG-----------RSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIE 58 (417)
T ss_dssp HHHHHHHSTTSEEEEE-T----------TT-----------EEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHH
T ss_pred ChhHHhhCCCceEEEE-C----------CC-----------EEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccce
Confidence 7899999999999986 1 23 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEE----CchhHHHHHHhhccCCCccEEEEecCCCCCccCCC
Q 006354 168 WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLIC----DSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGV 243 (649)
Q Consensus 168 ~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~----~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~ 243 (649)
++++++||+++|++++|++|.++.+++.++++.++++++|+ +......+............++.++.......
T Consensus 59 ~~~~~~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 135 (417)
T PF00501_consen 59 FVVAFLACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKK--- 135 (417)
T ss_dssp HHHHHHHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTC---
T ss_pred eeeeecccccccccccccccccccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccc---
Confidence 99999999999999999999999999999999999999997 33333344444443344455555553322110
Q ss_pred CCCCCCceEeehHHHHhcCCCCCCCCCC-CCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHH--hhCCCCCCCcEE
Q 006354 244 SGGISNWTVSSFSEVEKLGKRSPVDPSL-PSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK--TLIPNPGRSDVY 320 (649)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~--~~~~~~~~~d~~ 320 (649)
......+... ... .+ ..++++++++|||||||.||+|.+||+++++.+..+. ... +++ |++
T Consensus 136 -------~~~~~~~~~~---~~~---~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~--d~~ 199 (417)
T PF00501_consen 136 -------EALKSASLSD---EPQ---SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYF-GLG--DRI 199 (417)
T ss_dssp -------HHHHHHHHCH---CSH---STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTT-TTT--TEE
T ss_pred -------cccccccccc---ccc---cCCCCccceeEeecccccccccccccccccccccccccccccccc-ccC--ceE
Confidence 0000000000 000 00 0578999999999999999999999999999988865 223 334 599
Q ss_pred EEccChHHHHHH-HHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcc
Q 006354 321 LAYLPLAHVLEL-AAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (649)
Q Consensus 321 l~~~pl~h~~~~-~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~ 399 (649)
++++|++|.+++ ..++.++..|+++++.+.....+ +..++..++++++|+++++|.+++.+.+..... ...
T Consensus 200 l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~-----~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~-~~~-- 271 (417)
T PF00501_consen 200 LSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFD-----PESLLELISRYKPTILFAVPSMLEALLQSPEEK-TKI-- 271 (417)
T ss_dssp EESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHH-----HHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTT-HHG--
T ss_pred Eeeccccccccccccccccccccccccccccccccc-----cccchhccccccccccccccccccccccccccc-ccc--
Confidence 999999999999 66889999999999966554311 111223399999999999999999997622111 000
Q ss_pred hhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCC-ccccccC
Q 006354 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA-PIGQAYG 478 (649)
Q Consensus 400 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~-~l~~~YG 478 (649)
+....++||.+++||+++++++.+.+++.++. +|++.||
T Consensus 272 ----------------------------------------~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 311 (417)
T PF00501_consen 272 ----------------------------------------SKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYG 311 (417)
T ss_dssp ----------------------------------------TTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEE
T ss_pred ----------------------------------------cccccccccccccccccCChhhccccccccccccceeccc
Confidence 00011479999999999999999999999877 9999999
Q ss_pred cccccccccccC--CCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC
Q 006354 479 LTETCAGSTFSE--WDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE 556 (649)
Q Consensus 479 ~TE~~~~~~~~~--~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~ 556 (649)
+||++.+++... ......+++|.|+|+++++|+|+++++. +++|+.|||+|+|++++.||+++|+.|++.|. .
T Consensus 312 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~---~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~--~ 386 (417)
T PF00501_consen 312 STETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEP---LPPGEPGEIVIRGPNVFSGYYNDPELTAEAFI--D 386 (417)
T ss_dssp EGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSB---ESTTSEEEEEEESTTSBSEETTBHHHHHHHEE--T
T ss_pred ccccceeeeccccccccccccccccccccccccccccccccc---ccccccccccccCCccceeeeccccccccccc--c
Confidence 999999887663 2233668899999999999999665665 57899999999999999999999999999996 4
Q ss_pred CcccceeeCcEEEEccCCeEEEEecCCCeEEcC
Q 006354 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQ 589 (649)
Q Consensus 557 ~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~ 589 (649)
+ |||+|||+|++|+||+|+++||.||+||+|
T Consensus 387 ~--~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 387 D--GWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp T--SEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred c--cceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 4 799999999999999999999999999974
No 92
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-56 Score=498.44 Aligned_cols=458 Identities=21% Similarity=0.264 Sum_probs=355.9
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.++|+++++.+|+++|+.+ .++ .+||+||.++++++|.+|.++|+++|++|+++
T Consensus 33 ~~l~~~l~~~a~~~p~~~al~~------------~~~-----------~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~ 89 (567)
T PRK06178 33 RPLTEYLRAWARERPQRPAIIF------------YGH-----------VITYAELDELSDRFAALLRQRGVGAGDRVAVF 89 (567)
T ss_pred ccHHHHHHHHHHHCCCceEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 6899999999999999999976 333 59999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|++++|++|.++.+++.+++++++++++++++...+.+.++.... .++.++.....+.....
T Consensus 90 ~~n~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~-~~~~i~~~~~~~~~~~~ 168 (567)
T PRK06178 90 LPNCPQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET-SLRHVIVTSLADVLPAE 168 (567)
T ss_pred CCCCcHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC-CcceEEEeccccccccc
Confidence 99999999999999999999999999999999999999999999999998888777665443 34444443321110000
Q ss_pred CCCCCCCC-----ceEeehHHHHhcCC--CCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCC
Q 006354 242 GVSGGISN-----WTVSSFSEVEKLGK--RSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP 314 (649)
Q Consensus 242 ~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~ 314 (649)
.....+.. .....+.++..... ..........++++|+|+|||||||.||||++||++++..+.........+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~ 248 (567)
T PRK06178 169 PTLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVG 248 (567)
T ss_pred cccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccC
Confidence 00000000 00011222222111 111122345679999999999999999999999999988766554432267
Q ss_pred CCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCC---cccccccchhhccCccccceeecceEEEechHHHHHHHHHH
Q 006354 315 GRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGV 390 (649)
Q Consensus 315 ~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~---~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~ 390 (649)
.++|++++++|++|.+++.. ++.++..|+++++.+ +..+... ++++++|.+..+|..+..+....
T Consensus 249 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~-----------i~~~~~t~~~~~~~~~~~l~~~~ 317 (567)
T PRK06178 249 GEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAA-----------VERYRVTRTVMLVDNAVELMDHP 317 (567)
T ss_pred CCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHH-----------HHHhCCeEEeccHHHHHHHHhCC
Confidence 88999999999999999864 677899999999843 3344444 99999999999999887775421
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEE--ecCCCCCHHHHHHHHhh
Q 006354 391 VKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMI--CGGAPLSADSQRFINIC 468 (649)
Q Consensus 391 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~--~gG~~l~~~~~~~~~~~ 468 (649)
.. . ....++++.+. +.|+++++++.+.|+..
T Consensus 318 ~~---~--------------------------------------------~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 350 (567)
T PRK06178 318 RF---A--------------------------------------------EYDLSSLRQVRVVSFVKKLNPDYRQRWRAL 350 (567)
T ss_pred CC---C--------------------------------------------CCCcchheeeeeccccccCCHHHHHHHHHH
Confidence 00 0 00012556554 44689999999999998
Q ss_pred cCCccc-cccCcccccccccccCC---C----CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcccccccc
Q 006354 469 MGAPIG-QAYGLTETCAGSTFSEW---D----DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAG 540 (649)
Q Consensus 469 ~~~~l~-~~YG~TE~~~~~~~~~~---~----~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~g 540 (649)
++..++ +.||+||++..++.... . ...++++|+|+||++++|+|+++++. ++.|+.|||+|+|++++.|
T Consensus 351 ~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~---~~~g~~Gel~v~g~~v~~g 427 (567)
T PRK06178 351 TGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGEL---LPLGAEGEIVVRTPSLLKG 427 (567)
T ss_pred hCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCc---CCCCCceEEEEECCccccc
Confidence 887776 47999998766543321 1 12346799999999999999666654 6789999999999999999
Q ss_pred ccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCC
Q 006354 541 YFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGP 620 (649)
Q Consensus 541 Y~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~ 620 (649)
|+++++.+++.| .+ |||+|||+|++++||+++++||++|+||+ +|++|+|.+||+++.++|+|. +++|++..+
T Consensus 428 Y~~~~~~~~~~~---~d--g~~~TGDl~~~~~~g~l~i~GR~~d~i~~-~G~~i~~~eiE~~l~~~~~v~-~~~v~~~~~ 500 (567)
T PRK06178 428 YWNKPEATAEAL---RD--GWLHTGDIGKIDEQGFLHYLGRRKEMLKV-NGMSVFPSEVEALLGQHPAVL-GSAVVGRPD 500 (567)
T ss_pred ccCChhhhhhcc---cC--CceeecceEEEecCCeEEEEecccccEEE-CCEEECHHHHHHHHHhCCCee-EEEEEcCcC
Confidence 999999999888 56 79999999999999999999999999998 599999999999999999999 999999988
Q ss_pred CCcccchhhhh
Q 006354 621 MKLASSTKIFQ 631 (649)
Q Consensus 621 ~~~~~~~~~~~ 631 (649)
...++...++.
T Consensus 501 ~~~g~~~~~~v 511 (567)
T PRK06178 501 PDKGQVPVAFV 511 (567)
T ss_pred cccCcceEEEE
Confidence 77665444433
No 93
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.8e-57 Score=493.93 Aligned_cols=417 Identities=24% Similarity=0.291 Sum_probs=334.6
Q ss_pred HHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHH
Q 006354 89 EQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW 168 (649)
Q Consensus 89 ~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~ 168 (649)
+.+++.+||++|+.... +++ .+||+||.++++++|++|++.|+++||+|+|+++|++++
T Consensus 2 ~~~a~~~p~~~a~~~~~----------~~~-----------~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~ 60 (488)
T PRK09088 2 AFHARLQPQRLAAVDLA----------LGR-----------RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL 60 (488)
T ss_pred chhhhhCCCceEEEecC----------CCc-----------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH
Confidence 45778999999987521 333 699999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCC
Q 006354 169 FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGIS 248 (649)
Q Consensus 169 vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 248 (649)
+++++||+++|++++|+++.++++++.+++++++++++|+++.......
T Consensus 61 ~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~------------------------------- 109 (488)
T PRK09088 61 VALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDDAVAAGRT------------------------------- 109 (488)
T ss_pred HHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcchhhcccc-------------------------------
Confidence 9999999999999999999999999999999999999999875432100
Q ss_pred CceEeehHHHHhcCC-CCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChH
Q 006354 249 NWTVSSFSEVEKLGK-RSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLA 327 (649)
Q Consensus 249 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~ 327 (649)
....++++..... ..........++++++++|||||||.||+|.+||++++..+....... .+..+|++++.+|++
T Consensus 110 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~ 186 (488)
T PRK09088 110 --DVEDLAAFIASADALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLG-RVDAHSSFLCDAPMF 186 (488)
T ss_pred --cccchhhhhhhccccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhh-CCCCCcEEEEecchH
Confidence 0011111111111 011112234568899999999999999999999999998887777666 788899999999999
Q ss_pred HHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccce--eecceEEEechHHHHHHHHHHHHHHHhhcchhHHH
Q 006354 328 HVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVS--VLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNL 404 (649)
Q Consensus 328 h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~--~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~ 404 (649)
|++++.. ++.++..|+++++.+.....+. +..+. ++++|+++++|.+++.+.......
T Consensus 187 ~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~----------- 247 (488)
T PRK09088 187 HIIGLITSVRPVLAVGGSILVSNGFEPKRT--------LGRLGDPALGITHYFCVPQMAQAFRAQPGFD----------- 247 (488)
T ss_pred HHHHHHHHHHHHHhcCCEEEEcCCCCHHHH--------HHHHHhhccCCcEEeeHHHHHHHHHhCcCcC-----------
Confidence 9999876 5567889999988443221111 11143 589999999999998876421000
Q ss_pred HHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcccccc
Q 006354 405 FNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCA 484 (649)
Q Consensus 405 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~ 484 (649)
....++||.+++||++++....+.+... ++++++.||+||++.
T Consensus 248 ------------------------------------~~~~~~l~~~~~gG~~~~~~~~~~~~~~-g~~v~~~YG~TE~~~ 290 (488)
T PRK09088 248 ------------------------------------AAALRHLTALFTGGAPHAAEDILGWLDD-GIPMVDGFGMSEAGT 290 (488)
T ss_pred ------------------------------------ccccccceEEEecCCCCCHHHHHHHHHh-CCceeeeeccccccc
Confidence 0001379999999999999988777754 899999999999987
Q ss_pred cccccCC---CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccc
Q 006354 485 GSTFSEW---DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCW 561 (649)
Q Consensus 485 ~~~~~~~---~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w 561 (649)
+...... ...+.+++|.|+|+++++|+| +++.. ++.|..|||+|+|++++.||+++++.|++.|. .+ ||
T Consensus 291 ~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~---~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~--~~--g~ 362 (488)
T PRK09088 291 VFGMSVDCDVIRAKAGAAGIPTPTVQTRVVD-DQGND---CPAGVPGELLLRGPNLSPGYWRRPQATARAFT--GD--GW 362 (488)
T ss_pred ccccCCCcccccccCCccccCCCCcEEEEEC-CCCCC---CcCCCceEEEEECCccchhhcCChhhhhhhhc--CC--CC
Confidence 5543211 123557899999999999998 44543 67899999999999999999999999998885 45 89
Q ss_pred eeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccc
Q 006354 562 FYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASS 626 (649)
Q Consensus 562 ~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~ 626 (649)
|+|||+|+++++|.+++.||.||+||+ +|++|+|.+||++|.++|.|. +++|++..++..++.
T Consensus 363 ~~TGDl~~~~~~g~l~i~GR~~d~i~~-~G~~i~~~~iE~~l~~~~~v~-~~~v~~~~~~~~g~~ 425 (488)
T PRK09088 363 FRTGDIARRDADGFFWVVDRKKDMFIS-GGENVYPAEIEAVLADHPGIR-ECAVVGMADAQWGEV 425 (488)
T ss_pred eeecceEEEcCCCcEEEeccccceEEe-CCEEECHHHHHHHHHhCCCcc-eEEEEeCCCccCCce
Confidence 999999999999999999999999997 599999999999999999999 999999988765543
No 94
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.9e-56 Score=499.94 Aligned_cols=459 Identities=22% Similarity=0.317 Sum_probs=358.6
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHH-HCCCCCCCEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLV-NFGHNVDTRAA 159 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~-~~Gv~~gd~V~ 159 (649)
..++.++|.++++++|+++|++. +|+ .+||+||.++++++|++|+ +.|+++||+|+
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~------------~~~-----------~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~ 80 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHS------------FGK-----------TITYREADQLVEQFAAYLLGELQLKKGDRVA 80 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 35899999999999999999986 444 6999999999999999996 68999999999
Q ss_pred EEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCc
Q 006354 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (649)
Q Consensus 160 i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~ 239 (649)
++++|+++++++++||+++|++++|++|.++.+++.+++++++++++++++.....+..+....+ ...++..+......
T Consensus 81 i~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 159 (560)
T PRK08751 81 LMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTP-VKQVITTGLGDMLG 159 (560)
T ss_pred EECCCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCC-ccEEEEechhhhcc
Confidence 99999999999999999999999999999999999999999999999999887766665544333 23333321100000
Q ss_pred ---c-----------CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHH
Q 006354 240 ---D-----------SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAA 305 (649)
Q Consensus 240 ---~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~ 305 (649)
. ...... .......+.+..........+.....++++++++|||||||.||||++||+++...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~ 238 (560)
T PRK08751 160 FPKAALVNFVVKYVKKLVPEY-RINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQ 238 (560)
T ss_pred cccchhhhhhhhhhhcccccc-CCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHH
Confidence 0 000000 0011233444444333222233445778999999999999999999999999988877
Q ss_pred HHHhhCC---CCCC-CcEEEEccChHHHHHHHH-HHHHHHhCceEEe-CCcccccccchhhccCccccceeecceEEEec
Q 006354 306 AIKTLIP---NPGR-SDVYLAYLPLAHVLELAA-ESIMLCAGCAIGY-GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAV 379 (649)
Q Consensus 306 ~~~~~~~---~~~~-~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~-~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~ 379 (649)
.....+. .+.. ++++++.+|++|.+++.. .+.++..|+++++ .++... ..++..++++++|++.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~~ 310 (560)
T PRK08751 239 QAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDM--------PGFVKELKKTRFTAFTGV 310 (560)
T ss_pred HHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCH--------HHHHHHHHhcceeEecCh
Confidence 6655441 1333 357788899999999865 4556777777665 322211 112333999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCH
Q 006354 380 PAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSA 459 (649)
Q Consensus 380 P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~ 459 (649)
|.++..+.+.... .....++||.+++||+++++
T Consensus 311 p~~~~~l~~~~~~-----------------------------------------------~~~~l~~lr~v~~gG~~~~~ 343 (560)
T PRK08751 311 NTLFNGLLNTPGF-----------------------------------------------DQIDFSSLKMTLGGGMAVQR 343 (560)
T ss_pred HHHHHHHHcCcCc-----------------------------------------------CCcchhhheeeeeCCCCCCH
Confidence 9999887652100 00011379999999999999
Q ss_pred HHHHHHHhhcCCccccccCcccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEcccccc
Q 006354 460 DSQRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVT 538 (649)
Q Consensus 460 ~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~ 538 (649)
++.+.|++.+++++++.||+||++..++..... ....+++|.|+++++++++| +++.. ++.|..|||+|+|+.++
T Consensus 344 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~~---~~~g~~Gel~v~~~~~~ 419 (560)
T PRK08751 344 SVAERWKQVTGLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKD-DAGTV---LAIGEIGELCIKGPQVM 419 (560)
T ss_pred HHHHHHHHHhCCeEEEeeccccCCCceecccccccccCCCcCccCCCceEEEEC-CCCCC---CCCCCceEEEEecCccc
Confidence 999999998899999999999998776655432 23457899999999999999 55544 67889999999999999
Q ss_pred ccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEec
Q 006354 539 AGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRN 618 (649)
Q Consensus 539 ~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~ 618 (649)
.||+++++.|++.|. .+ |||+|||+|+++++|++++.||.||+||+ +|++|+|.+||++|..||+|. +|+|++.
T Consensus 420 ~gy~~~~~~~~~~~~--~~--g~~~TGD~~~~~~~g~l~i~GR~~d~i~~-~G~~v~p~eiE~~l~~~~~v~-~~~v~~~ 493 (560)
T PRK08751 420 KGYWKRPEETAKVMD--AD--GWLHTGDIARMDEQGFVYIVDRKKDMILV-SGFNVYPNEIEDVIAMMPGVL-EVAAVGV 493 (560)
T ss_pred hhhcCChhhhhhccc--cC--CCccccceEEEcCCceEEEEeechhheeE-CCEEEcHHHHHHHHHhCcCee-eeEEEec
Confidence 999999999998885 55 89999999999999999999999999998 599999999999999999999 9999999
Q ss_pred CCCCcccchhh
Q 006354 619 GPMKLASSTKI 629 (649)
Q Consensus 619 ~~~~~~~~~~~ 629 (649)
++...++.+.+
T Consensus 494 ~~~~~ge~~~~ 504 (560)
T PRK08751 494 PDEKSGEIVKV 504 (560)
T ss_pred CCCCCCceEEE
Confidence 98876654443
No 95
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.2e-56 Score=492.97 Aligned_cols=426 Identities=19% Similarity=0.213 Sum_probs=341.2
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..++.+.|.++++++|+++|+.. +++ .+||+||.++++++|++|++.|+++||+|++
T Consensus 34 ~~~~~~~~~~~a~~~p~~~a~~~------------~~~-----------~lTy~el~~~~~~la~~L~~~gi~~g~~V~i 90 (516)
T PRK13383 34 GTNPYTLLAVTAARWPGRTAIID------------DDG-----------ALSYRELQRATESLARRLTRDGVAPGRAVGV 90 (516)
T ss_pred CCcHHHHHHHHHHHCCCCcEEEe------------CCC-----------cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 47899999999999999999975 332 5999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCcc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKD 240 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~ 240 (649)
+++|++++++++|||+++|++++|+++.++.+++.+++++++++++++++...+.+..... .++.++....
T Consensus 91 ~~~~~~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~------~~~~~~~~~~--- 161 (516)
T PRK13383 91 MCRNGRGFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADD------AVAVIDPATA--- 161 (516)
T ss_pred ECCCCHHHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhc------ceEEeccchh---
Confidence 9999999999999999999999999999999999999999999999999887666544321 1222211000
Q ss_pred CCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHH--HHHHHhhCCCCCCCc
Q 006354 241 SGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVAT--AAAIKTLIPNPGRSD 318 (649)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~--~~~~~~~~~~~~~~d 318 (649)
... .. ...+...++.++|+|||||||.||||++||...... .......+ .+..+|
T Consensus 162 ----------------~~~----~~--~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d 218 (516)
T PRK13383 162 ----------------GAE----ES--GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRT-RLRTGS 218 (516)
T ss_pred ----------------hhh----cC--CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhh-ccCCCC
Confidence 000 00 011123456789999999999999999999843211 12223334 778899
Q ss_pred EEEEccChHHHHHHHHHHHHHHhCceEEe---CCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHH
Q 006354 319 VYLAYLPLAHVLELAAESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVE 395 (649)
Q Consensus 319 ~~l~~~pl~h~~~~~~~~~~l~~G~~l~~---~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 395 (649)
+++..+|++|.+++...+.++..|+++++ +++..+.+. ++++++|.+.++|.++..+.........
T Consensus 219 ~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 287 (516)
T PRK13383 219 RISVAMPMFHGLGLGMLMLTIALGGTVLTHRHFDAEAALAQ-----------ASLHRADAFTAVPVVLARILELPPRVRA 287 (516)
T ss_pred eEEEecCCcchhhHHHHHHHHhcCCEEEECCCCCHHHHHHH-----------HHHhCCcEEEecHHHHHHHHhccccccc
Confidence 99999999999999888888999999987 333333333 8999999999999999888653211000
Q ss_pred hhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCcccc
Q 006354 396 EKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQ 475 (649)
Q Consensus 396 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~ 475 (649)
....+++|.+++||+++++++.+.|.+.++.++++
T Consensus 288 ---------------------------------------------~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~ 322 (516)
T PRK13383 288 ---------------------------------------------RNPLPQLRVVMSSGDRLDPTLGQRFMDTYGDILYN 322 (516)
T ss_pred ---------------------------------------------cCCCCceEEEEECCCCCCHHHHHHHHHHcCchhhh
Confidence 00114899999999999999999999999999999
Q ss_pred ccCcccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhcc
Q 006354 476 AYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKV 554 (649)
Q Consensus 476 ~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~ 554 (649)
.||+||++..+...... ....+++|+|+|+++++|+| +++.. +++|+.|||+|+|+.++.||++++. +.+
T Consensus 323 ~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~---~~~g~~Gel~v~g~~~~~~Y~~~~~---~~~-- 393 (516)
T PRK13383 323 GYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILD-RNNRP---VGPRVTGRIFVGGELAGTRYTDGGG---KAV-- 393 (516)
T ss_pred cccccccccceeccccccccCCCcccCCCCCcEEEEEC-CCCCC---CCCCCceEEEEecCcccccccCCch---hhe--
Confidence 99999998665544322 23457899999999999999 44443 6789999999999999999998754 223
Q ss_pred CCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhh
Q 006354 555 DERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQ 631 (649)
Q Consensus 555 ~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~ 631 (649)
.+ |||+|||+|++|++|++++.||.||+||+ +|++|+|.+||++|.+||.|. +++|++..+...++.+.++.
T Consensus 394 -~~--g~~~TGDl~~~d~~G~l~i~GR~~~~i~~-~G~~v~~~eiE~~l~~~~~v~-~~~vv~~~~~~~g~~~~~~v 465 (516)
T PRK13383 394 -VD--GMTSTGDMGYLDNAGRLFIVGREDDMIIS-GGENVYPRAVENALAAHPAVA-DNAVIGVPDERFGHRLAAFV 465 (516)
T ss_pred -ec--CceecceeEEEcCCccEEEeccccceEEE-CCEEECHHHHHHHHHhCCCee-EEEEEeccccccCceEEEEE
Confidence 45 89999999999999999999999999998 599999999999999999999 99999998887765554443
No 96
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-56 Score=492.10 Aligned_cols=434 Identities=20% Similarity=0.241 Sum_probs=336.8
Q ss_pred HHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHH
Q 006354 90 QSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWF 169 (649)
Q Consensus 90 ~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~v 169 (649)
.+|+++|+++|+.+.+ +|+ .+||+||.++++++|+.|.++|+++||+|+++++|+++++
T Consensus 5 ~~a~~~p~~~a~~~~~----------~~~-----------~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~ 63 (501)
T PRK13390 5 THAQIAPDRPAVIVAE----------TGE-----------QVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEAL 63 (501)
T ss_pred hhhhhCCCCcEEEecC----------CCe-----------EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH
Confidence 4678899999997631 233 6999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCCC
Q 006354 170 IAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISN 249 (649)
Q Consensus 170 va~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 249 (649)
++++||+++|++++|+++.++++++.++++++++++++++............. ....+.+....
T Consensus 64 ~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~------------- 127 (501)
T PRK13390 64 VVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASAALDGLAAKVGAD---LPLRLSFGGEI------------- 127 (501)
T ss_pred HHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhc---cceEEEecCcc-------------
Confidence 99999999999999999999999999999999999999987654333222111 11122221110
Q ss_pred ceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEe--chHHHHHHH----HHHHhhCCCCCCCcEEEEc
Q 006354 250 WTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMI--THGNIVATA----AAIKTLIPNPGRSDVYLAY 323 (649)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~--th~~l~~~~----~~~~~~~~~~~~~d~~l~~ 323 (649)
-...++++...... +.....+++++|+|||||||.||||++ +|+++.... ......+ .+..+|++++.
T Consensus 128 ~~~~~~~~~~~~~~-----~~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 201 (501)
T PRK13390 128 DGFGSFEAALAGAG-----PRLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFY-DISESDIYYSS 201 (501)
T ss_pred cccccHHHHhcccC-----CCCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHh-CCCCCCeEEec
Confidence 01122333222110 111122357999999999999999995 566654422 1122344 77889999999
Q ss_pred cChHHHHHHHHHHHHHHhCceEEeCC---cccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcch
Q 006354 324 LPLAHVLELAAESIMLCAGCAIGYGS---TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGL 400 (649)
Q Consensus 324 ~pl~h~~~~~~~~~~l~~G~~l~~~~---~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~ 400 (649)
+|++|.+++...+..+..|+++++.+ +..+.+. ++++++|++.++|+++..+........
T Consensus 202 ~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~P~~~~~l~~~~~~~~------ 264 (501)
T PRK13390 202 APIYHAAPLRWCSMVHALGGTVVLAKRFDAQATLGH-----------VERYRITVTQMVPTMFVRLLKLDADVR------ 264 (501)
T ss_pred ccchhhhHHHHHHHHHhcCceEEEcCCcCHHHHHHH-----------HHHcCCeEEEecHHHHHHHHhccchhc------
Confidence 99999998876566678899998843 3334443 999999999999999988865311100
Q ss_pred hHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcc
Q 006354 401 TKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLT 480 (649)
Q Consensus 401 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~T 480 (649)
+....+++|.+++||+++++++.+.+++.++.++++.||+|
T Consensus 265 ---------------------------------------~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~t 305 (501)
T PRK13390 265 ---------------------------------------TRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSST 305 (501)
T ss_pred ---------------------------------------ccCChhhhheEEEcCCCCCHHHHHHHHHhcCCceeeeeccc
Confidence 00011378999999999999999999998899999999999
Q ss_pred cccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcc
Q 006354 481 ETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGM 559 (649)
Q Consensus 481 E~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~ 559 (649)
|++.++...... ....+++|+|+++ +++|+| +++.. +++|+.|||+|+|++++.||+++|+.|++.|. +.+.
T Consensus 306 E~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d-~~~~~---~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~--~~~~ 378 (501)
T PRK13390 306 EAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICD-DDGNE---LPAGRIGTVYFERDRLPFRYLNDPEKTAAAQH--PAHP 378 (501)
T ss_pred ccCceEEecchhhccCCCCcCCcccc-eEEEEC-CCCCC---CCCCCceEEEEecCCccccccCChhhhHHhhc--cCCC
Confidence 998755443322 2345789999999 799998 55543 78999999999999999999999999999886 3223
Q ss_pred cceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhh
Q 006354 560 CWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQ 631 (649)
Q Consensus 560 ~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~ 631 (649)
+|++|||+|++|+||++++.||.||+||+ +|++|+|.+||++|.+||.|. +++|++.+++..++.+.++.
T Consensus 379 ~w~~tGDl~~~~~dg~l~~~gR~~~~i~~-~G~~v~p~eIE~~l~~~~~v~-~~~v~~~~~~~~~e~~~~~v 448 (501)
T PRK13390 379 FWTTVGDLGSVDEDGYLYLADRKSFMIIS-GGVNIYPQETENALTMHPAVH-DVAVIGVPDPEMGEQVKAVI 448 (501)
T ss_pred ceEEcCceEEECCCCeEEEeeccccceeE-CCeeeCHHHHHHHHHhCCCee-EEEEEeccCcccCceeEEEE
Confidence 89999999999999999999999999997 599999999999999999999 99999999887766554443
No 97
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.7e-56 Score=496.99 Aligned_cols=460 Identities=25% Similarity=0.332 Sum_probs=351.8
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.++|++.++++|+++|+.+ +++ .+||+||.+++.++|++|.+.|+++||+|+++
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~------------~~~-----------~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~ 80 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHF------------LGK-----------DITFSVFHDKVKRFANYLQKLGVEKGDRVAIM 80 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEe------------cCe-----------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 6899999999999999999986 343 69999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCC-C--
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGS-E-- 238 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~-~-- 238 (649)
++|+++++++++||+++|++++|++|.++.+++.++++.++++++++++.....+....... ....++....... .
T Consensus 81 ~~~~~~~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 159 (563)
T PRK06710 81 LPNCPQAVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSAT-KIEHVIVTRIADFLPFP 159 (563)
T ss_pred CCCChHHHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhh-ccceeEEeccccccccc
Confidence 99999999999999999999999999999999999999999999999887655544332211 1222222110000 0
Q ss_pred ccC-----------CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHH
Q 006354 239 KDS-----------GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAI 307 (649)
Q Consensus 239 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~ 307 (649)
... .+...........+..+.... ...........+++++++|||||||.||||.+||++++......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~ 238 (563)
T PRK06710 160 KNLLYPFVQKKQSNLVVKVSESETIHLWNSVEKEV-NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMG 238 (563)
T ss_pred cccccchhhcccccccccccccchhhhhhhhhhcc-ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHH
Confidence 000 000000000001122221111 11111112235789999999999999999999999998654443
Q ss_pred HhhCCCC-CCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHH
Q 006354 308 KTLIPNP-GRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR 385 (649)
Q Consensus 308 ~~~~~~~-~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 385 (649)
...+... ..++++++.+|++|.+++.. ++.++..|+++++.++... ..++..++++++|++.++|+++..
T Consensus 239 ~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~~P~~~~~ 310 (563)
T PRK06710 239 VQWLYNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDM--------KMVFEAIKKHKVTLFPGAPTIYIA 310 (563)
T ss_pred HhhccCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCH--------HHHHHHHHHcCCeEEeccHHHHHH
Confidence 3322133 34568899999999998865 5568899999988543211 122333999999999999999998
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHH
Q 006354 386 VREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFI 465 (649)
Q Consensus 386 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~ 465 (649)
+....... ....+++|.+++||+++++++.+++
T Consensus 311 l~~~~~~~-----------------------------------------------~~~~~~lr~v~~gg~~~~~~~~~~~ 343 (563)
T PRK06710 311 LLNSPLLK-----------------------------------------------EYDISSIRACISGSAPLPVEVQEKF 343 (563)
T ss_pred HHcCCccc-----------------------------------------------cCChhhhhheeeCCCcCCHHHHHHH
Confidence 76521100 0001378999999999999999999
Q ss_pred HhhcCCccccccCcccccccccccCC-CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCC
Q 006354 466 NICMGAPIGQAYGLTETCAGSTFSEW-DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNN 544 (649)
Q Consensus 466 ~~~~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~ 544 (649)
++.+++++++.||+||++.++..... .....+++|+|++++.+++++++++.. ++.|+.|||+++|+.++.||+++
T Consensus 344 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~---~~~g~~Gel~v~g~~~~~gY~~~ 420 (563)
T PRK06710 344 ETVTGGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEA---LPPGEIGEIVVKGPQIMKGYWNK 420 (563)
T ss_pred HHhhCCCEecccccccCccccccCcccccccCCccCCCCCCCeEEEEECCCCcc---CCCCCceEEEEecCccchhhhCC
Confidence 99889999999999999876543322 223457899999999999999666543 78899999999999999999999
Q ss_pred CccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcc
Q 006354 545 PGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLA 624 (649)
Q Consensus 545 ~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~ 624 (649)
++.|...| .+ |||+|||+|++++||+++++||.||+||+ +|++|+|.+||++|.+||.|. +++|++.++...+
T Consensus 421 ~~~~~~~~---~~--g~~~TGD~~~~~~~g~~~~~GR~dd~i~~-~G~~v~p~eiE~~l~~~~~v~-~~~v~~~~~~~~g 493 (563)
T PRK06710 421 PEETAAVL---QD--GWLHTGDVGYMDEDGFFYVKDRKKDMIVA-SGFNVYPREVEEVLYEHEKVQ-EVVTIGVPDPYRG 493 (563)
T ss_pred hHHHhhhc---cc--CcccccceEEEcCCCcEEEeeccccEEEE-CCEEECHHHHHHHHHhCccee-eEEEEccccCCcC
Confidence 99999888 56 89999999999999999999999999998 599999999999999999999 9999999988777
Q ss_pred cchhhhh
Q 006354 625 SSTKIFQ 631 (649)
Q Consensus 625 ~~~~~~~ 631 (649)
+.+.++.
T Consensus 494 ~~~~~~v 500 (563)
T PRK06710 494 ETVKAFV 500 (563)
T ss_pred ceeEEEE
Confidence 6654443
No 98
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6e-56 Score=485.11 Aligned_cols=404 Identities=24% Similarity=0.289 Sum_probs=330.7
Q ss_pred HHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHH
Q 006354 91 SCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFI 170 (649)
Q Consensus 91 ~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vv 170 (649)
.+++.++++|+.. +++ .+||+||.++++++|..|+ ++|+|+++++|++++++
T Consensus 9 ~~~~~~~~~a~~~------------~~~-----------~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~ 60 (471)
T PRK07787 9 VAAAADIADAVRI------------GGR-----------VLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVL 60 (471)
T ss_pred hhcccCCceEEEe------------CCc-----------EEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHH
Confidence 3456788999876 444 6999999999999999996 56999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCCCc
Q 006354 171 AFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNW 250 (649)
Q Consensus 171 a~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 250 (649)
+++||+++|++++|+++..+.+++.++++++++++++++.+.. ....+.+ .....
T Consensus 61 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~------~~~~~~~---~~~~~---------------- 115 (471)
T PRK07787 61 AVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGPAPDD------PAGLPHV---PVRLH---------------- 115 (471)
T ss_pred HHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEecCCcc------cccccce---eeecc----------------
Confidence 9999999999999999999999999999999999999976311 0011110 00000
Q ss_pred eEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChHHHH
Q 006354 251 TVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVL 330 (649)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 330 (649)
. ..........++|+++|+|||||||.||||++||+++...+......+ .+.++|++++.+|++|.+
T Consensus 116 -~-----------~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~ 182 (471)
T PRK07787 116 -A-----------RSWHRYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAW-QWTADDVLVHGLPLFHVH 182 (471)
T ss_pred -c-----------cccccCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhc-CCCccceeEeccCCeeec
Confidence 0 000011224578999999999999999999999999999988888888 888999999999999999
Q ss_pred HHHH-HHHHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHH
Q 006354 331 ELAA-ESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFN 406 (649)
Q Consensus 331 ~~~~-~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~ 406 (649)
++.. ++.++..|+++++. ++..+.+. ++ +++|++.++|.++..+.+.....
T Consensus 183 g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~-----------i~-~~~t~~~~~P~~~~~l~~~~~~~------------- 237 (471)
T PRK07787 183 GLVLGVLGPLRIGNRFVHTGRPTPEAYAQA-----------LS-EGGTLYFGVPTVWSRIAADPEAA------------- 237 (471)
T ss_pred hhHHHHHHHHhcCCEEEecCCCCHHHHHHH-----------Hh-hCceEEEcchHHHHHHHhCcccc-------------
Confidence 9876 77889999999884 33333333 88 99999999999998887521100
Q ss_pred HHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcccccccc
Q 006354 407 IGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGS 486 (649)
Q Consensus 407 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~ 486 (649)
...+++|.+++||+++++++.++|++.++.++++.||+||++...
T Consensus 238 -----------------------------------~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 282 (471)
T PRK07787 238 -----------------------------------RALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITL 282 (471)
T ss_pred -----------------------------------ccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcce
Confidence 001379999999999999999999998899999999999998765
Q ss_pred cccCCCCCCCCccCCCcccceEEEEecCCCCcccCCC-CC-CccEEEEccccccccccCCCccchhhhccCCCcccceee
Q 006354 487 TFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDK-PM-PRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYT 564 (649)
Q Consensus 487 ~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~-~g-~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~T 564 (649)
+.........+++|+|+++++++|+| +++.. ++ .| ..|||+++|++++.||+++++.|++.|. .+ +||+|
T Consensus 283 ~~~~~~~~~~~~vG~~~~g~~~~i~d-~~~~~---~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~--~~--~~~~T 354 (471)
T PRK07787 283 STRADGERRPGWVGLPLAGVETRLVD-EDGGP---VPHDGETVGELQVRGPTLFDGYLNRPDATAAAFT--AD--GWFRT 354 (471)
T ss_pred ecCCCCcccCCcccccCCCcEEEEEC-CCCCC---CCCCCCCceEEEEECcccchhhcCChhhchhccc--CC--Cceec
Confidence 54444344567899999999999999 44443 33 23 4899999999999999999999999986 56 89999
Q ss_pred CcEEEEccCCeEEEEecC-CCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhh
Q 006354 565 GDIGQVYPDGCLEIIDRK-KDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIF 630 (649)
Q Consensus 565 GDlg~~~~dG~l~i~GR~-dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~ 630 (649)
||+|++++||+++++||+ ||++|. +|++|+|.+||++|.++|.|. +++|++.++...++.+.++
T Consensus 355 GDlg~~~~dg~l~~~GR~~d~~i~~-~G~~v~~~eIE~~l~~~~~v~-~~~v~~~~~~~~~~~~~a~ 419 (471)
T PRK07787 355 GDVAVVDPDGMHRIVGRESTDLIKS-GGYRIGAGEIETALLGHPGVR-EAAVVGVPDDDLGQRIVAY 419 (471)
T ss_pred CceEEEcCCCCEEEeCCCCceeEee-CCEEECHHHHHHHHHhCCCcc-eEEEEcccccccCeEEEEE
Confidence 999999999999999996 899997 599999999999999999999 9999999888766555443
No 99
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=9.3e-56 Score=488.04 Aligned_cols=424 Identities=19% Similarity=0.193 Sum_probs=342.9
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEc
Q 006354 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILA 162 (649)
Q Consensus 83 tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~ 162 (649)
++.+.|.+.++.+|+++|+.. .++ .+||+||.+++.++|+.|.+.|+++|++|+|++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~------------~~~-----------~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~ 57 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRY------------QGQ-----------ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYG 57 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEc------------CCc-----------EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEe
Confidence 478899999999999999975 333 699999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCC
Q 006354 163 ETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSG 242 (649)
Q Consensus 163 ~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~ 242 (649)
+|+.+++++++||+++|++++|+++.++.+++.++++.++++.++++.+....... .. ++.+.
T Consensus 58 ~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~-------~~-~~~~~--------- 120 (502)
T TIGR01734 58 HMEPHMLVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG-------TQ-IITLS--------- 120 (502)
T ss_pred CCCHHHHHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC-------Cc-eEEch---------
Confidence 99999999999999999999999999999999999999999999998765332211 01 11110
Q ss_pred CCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEE
Q 006354 243 VSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLA 322 (649)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~ 322 (649)
...++..... .........+++.++|+|||||||.||+|+++|+++.+.+.+....+ ....+++++.
T Consensus 121 -----------~~~~~~~~~~-~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~l~ 187 (502)
T TIGR01734 121 -----------ALEQAETSGG-PVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADF-PLSEGKQFLN 187 (502)
T ss_pred -----------HhhhhhhhcC-CccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhC-CCCCCceEEe
Confidence 1111111111 11112334678999999999999999999999999999998888877 8889999999
Q ss_pred ccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhH
Q 006354 323 YLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTK 402 (649)
Q Consensus 323 ~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~ 402 (649)
.+|++|.+++..++.++..|+++++.++....+. ..++..++++++|.+.++|.+++.+......
T Consensus 188 ~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~---------- 252 (502)
T TIGR01734 188 QAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNF-----KLLFEELPKTGLNVWVSTPSFVDMCLLDPNF---------- 252 (502)
T ss_pred ecCceechhHHHHHHHHHCCCEEEEcCHHHhcCH-----HHHHHHHHHcCCeEEEEChhHHHHHHhcccc----------
Confidence 9999999999888899999999998544222221 2223338999999999999998776542110
Q ss_pred HHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccccCccc
Q 006354 403 NLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYGLTE 481 (649)
Q Consensus 403 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE 481 (649)
.....++++.++++|+++++++.+.+.+.+ ++++++.||+||
T Consensus 253 -------------------------------------~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE 295 (502)
T TIGR01734 253 -------------------------------------NQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTE 295 (502)
T ss_pred -------------------------------------ccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCc
Confidence 001124899999999999999999888876 789999999999
Q ss_pred ccccccccCC-----CCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCC
Q 006354 482 TCAGSTFSEW-----DDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE 556 (649)
Q Consensus 482 ~~~~~~~~~~-----~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~ 556 (649)
++...+.... ......++|.|.|+++++|+| +++.. +++|+.|||+|+|+.++.||+++++.|.+.|.. .
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~---~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-~ 370 (502)
T TIGR01734 296 ATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMD-EEGEP---LPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFS-H 370 (502)
T ss_pred ceEEEEEEEccccccccCCccccccccCCCEEEEEC-CCCCC---CCCCCeeEEEEccccccccccCCcccchHhhee-C
Confidence 8765443221 122336899999999999999 44432 678999999999999999999999999988742 2
Q ss_pred CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecC
Q 006354 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNG 619 (649)
Q Consensus 557 ~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~ 619 (649)
++.+||+|||+|++|++ +++++||.+|+||+ +|++|+|.+||++|.++|.|+ +|+|++..
T Consensus 371 ~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~-~~~vv~~~ 430 (502)
T TIGR01734 371 EGQPAYRTGDAGTITDG-QLFYQGRLDFQIKL-HGYRIELEDIEFNLRQSSYIE-SAVVVPKY 430 (502)
T ss_pred CCcEEEECCCEEEEECC-EEEEeccccCeEEE-CcEEeCHHHHHHHHHcCCCcc-EEEEEEEE
Confidence 44579999999999966 99999999999997 699999999999999999999 99999954
No 100
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.4e-55 Score=529.51 Aligned_cols=443 Identities=19% Similarity=0.199 Sum_probs=347.4
Q ss_pred CCCHHHHHHHHHHhCCC-CcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q 006354 81 ASTMAALFEQSCKSHPQ-DRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAA 159 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~-~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~ 159 (649)
..++.+.|+++++++|+ +.|+.+. ++ +.+||+||.++++++|+.|++ |+++||+|+
T Consensus 630 ~~~~~~~l~~~~~~~~~~~~ai~~~-----------~~-----------~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~ 686 (1140)
T PRK06814 630 DRTLFEALIEAAKIHGFKKLAVEDP-----------VN-----------GPLTYRKLLTGAFVLGRKLKK-NTPPGENVG 686 (1140)
T ss_pred cCCHHHHHHHHHHHcCCCCeEeECC-----------CC-----------CccCHHHHHHHHHHHHHHHHh-cCCCCCeEE
Confidence 46899999999999874 5666421 22 269999999999999999975 999999999
Q ss_pred EEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHH--HHhhccCCCccEEEEecCCCC
Q 006354 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKL--SAVSSSLKTIKNVIYFENDGS 237 (649)
Q Consensus 160 i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l--~~~~~~~~~~~~ii~~~~~~~ 237 (649)
++++|+++++++++||+++|++++|+||.++++++.++++++++++++++++..+.. .......+....++.+++...
T Consensus 687 i~~~n~~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 766 (1140)
T PRK06814 687 VMLPNANGAAVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRA 766 (1140)
T ss_pred EEcCCchHHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhc
Confidence 999999999999999999999999999999999999999999999999998765432 112222223334454443211
Q ss_pred CccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCC
Q 006354 238 EKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRS 317 (649)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~ 317 (649)
.. .....+.+....... ........++|+++|+|||||||.||||++||+++.+.+......+ .++++
T Consensus 767 ~~----------~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-~~~~~ 834 (1140)
T PRK06814 767 QI----------GLADKIKGLLAGRFP-LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI-DFSPE 834 (1140)
T ss_pred cC----------ChHHHHHHHhhccCC-ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh-CCCCc
Confidence 00 000011111111111 1111235789999999999999999999999999999998888888 88999
Q ss_pred cEEEEccChHHHHHHHH-HHHHHHhCceEEeCC-cccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHH
Q 006354 318 DVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGS-TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVE 395 (649)
Q Consensus 318 d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~-~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~ 395 (649)
|++++.+|++|.+++.. ++.++..|+++++.+ +... +...+.++++++|++.++|++++.+.+...
T Consensus 835 d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~---- 902 (1140)
T PRK06814 835 DKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHY--------RIIPELIYDTNATILFGTDTFLNGYARYAH---- 902 (1140)
T ss_pred CEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccH--------HHHHHHHHhcCCEEEEecHHHHHHHHhhcc----
Confidence 99999999999999844 677899999998843 2211 111223889999999999999987754210
Q ss_pred hhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCcccc
Q 006354 396 EKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQ 475 (649)
Q Consensus 396 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~ 475 (649)
....+++|.+++||+++++++.+.+.+.+++++++
T Consensus 903 ---------------------------------------------~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~ 937 (1140)
T PRK06814 903 ---------------------------------------------PYDFRSLRYVFAGAEKVKEETRQTWMEKFGIRILE 937 (1140)
T ss_pred ---------------------------------------------cccccceeEEEEcCCcCCHHHHHHHHHHhCCcEEe
Confidence 00114899999999999999999999989999999
Q ss_pred ccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccC
Q 006354 476 AYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD 555 (649)
Q Consensus 476 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~ 555 (649)
.||+||++..++.......+.+++|+|+|++++++.+.+ +.++.|||+|+|++++.||+++++.+. +...
T Consensus 938 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~~g~~~~~~~~~--------~~~~~Gel~v~g~~~~~gY~~~~~~~~--~~~~ 1007 (1140)
T PRK06814 938 GYGVTETAPVIALNTPMHNKAGTVGRLLPGIEYRLEPVP--------GIDEGGRLFVRGPNVMLGYLRAENPGV--LEPP 1007 (1140)
T ss_pred ccccccccceEEecCCCCCCCCcCCccCCCCeEEEeecC--------CCCCceEEEEeCCCcchhhcCCCCCCc--cccC
Confidence 999999988776555444566899999999999998732 135789999999999999999765332 2111
Q ss_pred CCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhh
Q 006354 556 ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKI 629 (649)
Q Consensus 556 ~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~ 629 (649)
.+ |||+|||+|++|+||++++.||.||+||+ +|++|+|.|||++|.+||.|. +++|++.+++..++.+.+
T Consensus 1008 ~~--g~~~TGDl~~~d~dG~l~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~-~~~vv~~~~~~~g~~~~~ 1077 (1140)
T PRK06814 1008 AD--GWYDTGDIVTIDEEGFITIKGRAKRFAKI-AGEMISLAAVEELAAELWPDA-LHAAVSIPDARKGERIIL 1077 (1140)
T ss_pred CC--CeEecCCEEEECCCCeEEEEecccCeeee-CCEEECHHHHHHHHHhcCCcc-cEEEEEcccCCCCceEEE
Confidence 34 89999999999999999999999999997 599999999999999999999 999999998887765443
No 101
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.1e-55 Score=488.28 Aligned_cols=459 Identities=23% Similarity=0.315 Sum_probs=354.6
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHH-CCCCCCCEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAA 159 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~-~Gv~~gd~V~ 159 (649)
..++.++|+.+++++|+++|+.. +++ .+||+||.++++++|.+|++ .|+++|++|+
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~------------~~~-----------~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~ 78 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFIN------------MGE-----------VMTFRKLEERSRAFAAYLQNGLGLKKGDRVA 78 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEE------------CCc-----------cccHHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 35899999999999999999985 343 69999999999999999984 8999999999
Q ss_pred EEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCc
Q 006354 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEK 239 (649)
Q Consensus 160 i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~ 239 (649)
++++|+++++++++||+++|++++|++|.++++++.++++.+++++++++.+..+.+.++.... ..+.++.........
T Consensus 79 i~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 157 (560)
T PRK08974 79 LMMPNLLQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKT-PVKHVILTRMGDQLS 157 (560)
T ss_pred EECCCCHHHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhc-CcceEEEeccccccc
Confidence 9999999999999999999999999999999999999999999999999887666555543322 223333221110000
Q ss_pred --cCCC--------CCC-CC--CceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHH
Q 006354 240 --DSGV--------SGG-IS--NWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAA 306 (649)
Q Consensus 240 --~~~~--------~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~ 306 (649)
.... ... +. .....++.+....+...........++++++|+|||||||.||+|.++|++++..+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~ 237 (560)
T PRK08974 158 TAKGTLVNFVVKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQ 237 (560)
T ss_pred ccccccccchhhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHH
Confidence 0000 000 00 0011222232222221111123356789999999999999999999999999887765
Q ss_pred HHhhCC--CCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeC-CcccccccchhhccCccccceeecceEEEechHH
Q 006354 307 IKTLIP--NPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG-STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAI 382 (649)
Q Consensus 307 ~~~~~~--~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~-~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~ 382 (649)
....+. ....++.++..+|++|.+++.. .+.++..|+++++. ++... ..++..++++++|.+.++|.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~--------~~~~~~i~~~~~t~~~~~p~~ 309 (560)
T PRK08974 238 AKAAYGPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDI--------PGFVKELKKYPFTAITGVNTL 309 (560)
T ss_pred HHHhhccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCH--------HHHHHHHHhcCcceEcCcHHH
Confidence 544331 2344678889999999998755 55678889887763 22211 112333899999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHH
Q 006354 383 FDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQ 462 (649)
Q Consensus 383 l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~ 462 (649)
++.+...... .....+++|.+++||+++++.+.
T Consensus 310 ~~~l~~~~~~-----------------------------------------------~~~~~~~lr~~~~gg~~~~~~~~ 342 (560)
T PRK08974 310 FNALLNNEEF-----------------------------------------------QELDFSSLKLSVGGGMAVQQAVA 342 (560)
T ss_pred HHHHHhCcCc-----------------------------------------------ccCCccceeEEEecCccCCHHHH
Confidence 9988653100 00011479999999999999999
Q ss_pred HHHHhhcCCccccccCcccccccccccCCCC-CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccc
Q 006354 463 RFINICMGAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGY 541 (649)
Q Consensus 463 ~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY 541 (649)
+.|++.+|+++++.||+||++.+++...... ...+++|.|+|+++++|+| +++.. ++.|+.|||+|+|+.++.||
T Consensus 343 ~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~---~~~g~~Gel~v~g~~~~~gy 418 (560)
T PRK08974 343 ERWVKLTGQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEIKLVD-DDGNE---VPPGEPGELWVKGPQVMLGY 418 (560)
T ss_pred HHHHHHhCCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEEEEEC-CCCCC---CCCCCceEEEEecCCcchhh
Confidence 9999988999999999999987776554332 3357899999999999998 45543 67899999999999999999
Q ss_pred cCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCC
Q 006354 542 FNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPM 621 (649)
Q Consensus 542 ~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~ 621 (649)
+++++.+++.| .+ |||+|||+|+++++|.++++||.||+|++. |++|+|.+||++|.+||+|. +++|++.++.
T Consensus 419 ~~~~~~~~~~~---~~--g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~-G~~i~~~~IE~~l~~~~~v~-~~~v~~~~~~ 491 (560)
T PRK08974 419 WQRPEATDEVI---KD--GWLATGDIAVMDEEGFLRIVDRKKDMILVS-GFNVYPNEIEDVVMLHPKVL-EVAAVGVPSE 491 (560)
T ss_pred cCChhhhhhhh---hc--CCcccCCEEEEcCCceEEEEecccceEEeC-CEEECHHHHHHHHHhCCCee-EEEEEeeecC
Confidence 99999999888 56 899999999999999999999999999985 99999999999999999999 9999999887
Q ss_pred Ccccchhh
Q 006354 622 KLASSTKI 629 (649)
Q Consensus 622 ~~~~~~~~ 629 (649)
..++.+.+
T Consensus 492 ~~g~~~~~ 499 (560)
T PRK08974 492 VSGEAVKI 499 (560)
T ss_pred CcceEEEE
Confidence 76654444
No 102
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-55 Score=494.73 Aligned_cols=451 Identities=20% Similarity=0.256 Sum_probs=330.6
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEc
Q 006354 83 TMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILA 162 (649)
Q Consensus 83 tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~ 162 (649)
++.++|+++++.+|+++|+.+.+. ++. + .+.++.+||+||.++++++|++|+++| .+||+|+|++
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~~~---------~~~-~----~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~ 66 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFIDY---------EQD-P----AGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILA 66 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEEcc---------CCC-C----CCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEc
Confidence 688999999999999999986421 110 0 122357999999999999999999999 6899999999
Q ss_pred cCCHHHHHHHHHHHhcCCEEEEecC---CCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCC--CccEEEEecCCCC
Q 006354 163 ETCVEWFIAFQGCFRQSITVVTIYS---SLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLK--TIKNVIYFENDGS 237 (649)
Q Consensus 163 ~~~~~~vva~lA~~~~G~~~vpl~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~--~~~~ii~~~~~~~ 237 (649)
+|++++++++|||+++|++++|+++ ..+.+++.++|+++++++++++++..+.+........ ....++.++..
T Consensus 67 ~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 144 (578)
T PRK05850 67 PQGLEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL-- 144 (578)
T ss_pred CCcccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc--
Confidence 9999999999999999999999997 4578999999999999999999887776654322111 11112211110
Q ss_pred CccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCC----
Q 006354 238 EKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPN---- 313 (649)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~---- 313 (649)
++ ............++++++|+|||||||.||||++||+++++.+......+..
T Consensus 145 -------------------~~---~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~ 202 (578)
T PRK05850 145 -------------------DL---DSPRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGG 202 (578)
T ss_pred -------------------cc---ccCCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhcccccc
Confidence 00 0000011223467899999999999999999999999999887665443201
Q ss_pred -CCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHH
Q 006354 314 -PGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVV 391 (649)
Q Consensus 314 -~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~ 391 (649)
...++++++++|++|.+++.. ++.+++.|+++++.++..+... +..+...+++++++++ .+|..+..+.....
T Consensus 203 ~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~----p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~ 277 (578)
T PRK05850 203 VPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQR----PARWMQLLASNPHAFS-AAPNFAFELAVRKT 277 (578)
T ss_pred CCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHC----HHHHHHHHHHcCCeEE-eCCcHHHHHHHHhc
Confidence 356789999999999999865 7788999999998654322111 1223333888999865 56665443322110
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcC-
Q 006354 392 KKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMG- 470 (649)
Q Consensus 392 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~- 470 (649)
.... ......+++|.+++||+++++++.+.|.+.++
T Consensus 278 ~~~~-------------------------------------------~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~ 314 (578)
T PRK05850 278 SDDD-------------------------------------------MAGLDLGGVLGIISGSERVHPATLKRFADRFAP 314 (578)
T ss_pred chhh-------------------------------------------hcCcchhhheeEEECcCCCCHHHHHHHHHHHHh
Confidence 0000 00001137999999999999999988887762
Q ss_pred -----CccccccCcccccccccccCCCCC-------------------------CCCccCCCcccceEEEEecCCCCccc
Q 006354 471 -----APIGQAYGLTETCAGSTFSEWDDP-------------------------SVGRVGPPVPCCYIKLVSWDEGGYKT 520 (649)
Q Consensus 471 -----~~l~~~YG~TE~~~~~~~~~~~~~-------------------------~~~~vG~p~p~~~v~i~d~~~~~~~~ 520 (649)
..+++.||+||++..+........ ...++|.|. +.+++|+|++++..
T Consensus 315 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~-- 391 (578)
T PRK05850 315 FNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIE-- 391 (578)
T ss_pred cCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcC--
Confidence 368999999998765443221100 012345554 57899999655543
Q ss_pred CCCCCCccEEEEccccccccccCCCccchhhhccC---C----CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCcee
Q 006354 521 SDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD---E----RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEY 593 (649)
Q Consensus 521 ~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~---~----~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~ 593 (649)
+++|+.|||+|+|+.++.||+++|+.|++.|..+ + ...+||+|||+|+++ ||+++++||+||+||+ +|++
T Consensus 392 -~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~-~G~~ 468 (578)
T PRK05850 392 -CPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIV-DGRN 468 (578)
T ss_pred -CCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEE-CCee
Confidence 7899999999999999999999999999999521 0 012799999999998 9999999999999998 5999
Q ss_pred eeCChhhhHhccCcccccceEEEecCCCCcccchhh
Q 006354 594 ISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKI 629 (649)
Q Consensus 594 v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~ 629 (649)
|+|.|||++|.+||.+. ++|++.++. .++.+.+
T Consensus 469 i~p~eIE~~l~~~~~~~--~~v~~v~~~-~~~~~~a 501 (578)
T PRK05850 469 HYPDDIEATIQEITGGR--VAAISVPDD-GTEKLVA 501 (578)
T ss_pred cCHHHHHHHHHHhcCCc--EEEEEecCC-CceEEEE
Confidence 99999999999999954 788888776 3433333
No 103
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-54 Score=483.51 Aligned_cols=450 Identities=21% Similarity=0.221 Sum_probs=346.6
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.+..+.|++.++++|+++|+.+ ++. .+||+||.++++++|++|.+.|+++||+|+|+
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~------------~~~-----------~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~ 74 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIH------------GDR-----------RRTWAETYARCRRLASALARRGIGRGDTVAVL 74 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEE------------CCe-----------EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 5888999999999999999976 333 59999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|++++|+++.++.+++.+++++++++.++++.+....+.+.....+..+. +.++......
T Consensus 75 ~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-- 151 (545)
T PRK08162 75 LPNIPAMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKP-LVIDVDDPEY-- 151 (545)
T ss_pred CCCchHHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCce-EEEecCcccc--
Confidence 9999999999999999999999999999999999999999999999999887777665444333222 2222111100
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEE
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYL 321 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l 321 (649)
.....+...+++++..............+.+++++|+|||||||.||||+++|+++..........+ .+..+++++
T Consensus 152 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~-~~~~~~~~l 227 (545)
T PRK08162 152 ---PGGRFIGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW-GMPKHPVYL 227 (545)
T ss_pred ---ccCCCcccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCCCCCeeE
Confidence 0001123345666654322211111233456899999999999999999999999877766665566 778889999
Q ss_pred EccChHHHHHHHHHHHHHHhCceEEe---CCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhc
Q 006354 322 AYLPLAHVLELAAESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKG 398 (649)
Q Consensus 322 ~~~pl~h~~~~~~~~~~l~~G~~l~~---~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~ 398 (649)
+.+|++|..++...+...+.|++.++ .++..+.+. ++++++|++.++|.++..+.+.......
T Consensus 228 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----------l~~~~~t~~~~~P~~~~~l~~~~~~~~~--- 293 (545)
T PRK08162 228 WTLPMFHCNGWCFPWTVAARAGTNVCLRKVDPKLIFDL-----------IREHGVTHYCGAPIVLSALINAPAEWRA--- 293 (545)
T ss_pred eccCcHhhhhHHHHHHHHHHccEEEEeCCCCHHHHHHH-----------HHHcCCeEEEechHHHHHHHhCcccccc---
Confidence 99999999998765544445555444 344444444 9999999999999999988753111000
Q ss_pred chhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccC
Q 006354 399 GLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYG 478 (649)
Q Consensus 399 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG 478 (649)
...+++.++++|+++++++.+.++.. ++++++.||
T Consensus 294 --------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~YG 328 (545)
T PRK08162 294 --------------------------------------------GIDHPVHAMVAGAAPPAAVIAKMEEI-GFDLTHVYG 328 (545)
T ss_pred --------------------------------------------CCccceEEEECCCCCCHHHHHHHHHh-CCceeeccc
Confidence 00145567889999999999988874 899999999
Q ss_pred cccccccccccCCC-----------CCCCCccCCCcc-cceEEEEecCCCCcccCCCC-C-CccEEEEccccccccccCC
Q 006354 479 LTETCAGSTFSEWD-----------DPSVGRVGPPVP-CCYIKLVSWDEGGYKTSDKP-M-PRGEIVVGGFNVTAGYFNN 544 (649)
Q Consensus 479 ~TE~~~~~~~~~~~-----------~~~~~~vG~p~p-~~~v~i~d~~~~~~~~~~~~-g-~~GEl~v~g~~v~~gY~~~ 544 (649)
+||+++.++.+... ....+++|.+++ +..++|+|++++.. ++. | +.|||+|+|+.++.||+++
T Consensus 329 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~---~~~~g~~~Gel~v~g~~~~~gY~~~ 405 (545)
T PRK08162 329 LTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQP---VPADGETIGEIMFRGNIVMKGYLKN 405 (545)
T ss_pred ccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcc---cCCCCCceeEEEEecCcchhhhcCC
Confidence 99986544433211 011245677665 34678888555543 333 3 4799999999999999999
Q ss_pred CccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcc
Q 006354 545 PGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLA 624 (649)
Q Consensus 545 ~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~ 624 (649)
++.|.+.| .+ +||+|||+|++|+||+++++||.||+||+ +|++|+|.+||++|.+||+|. +++|++.+++..+
T Consensus 406 ~~~~~~~~---~~--g~~~TGDl~~~d~dg~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~v~-~~~vv~~~~~~~~ 478 (545)
T PRK08162 406 PKATEEAF---AG--GWFHTGDLAVLHPDGYIKIKDRSKDIIIS-GGENISSIEVEDVLYRHPAVL-VAAVVAKPDPKWG 478 (545)
T ss_pred hhhhHHHh---hC--CCcccCceEEEcCCccEEEEecccceEEe-CCEEECHHHHHHHHHhCCccc-EEEEEeeeccccC
Confidence 99999999 56 89999999999999999999999999997 599999999999999999999 9999998887666
Q ss_pred cchhhh
Q 006354 625 SSTKIF 630 (649)
Q Consensus 625 ~~~~~~ 630 (649)
+.+.++
T Consensus 479 ~~~~~~ 484 (545)
T PRK08162 479 EVPCAF 484 (545)
T ss_pred ceEEEE
Confidence 554443
No 104
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-55 Score=493.33 Aligned_cols=443 Identities=21% Similarity=0.268 Sum_probs=339.9
Q ss_pred ccCCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCC
Q 006354 75 EVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNV 154 (649)
Q Consensus 75 ~~~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~ 154 (649)
.++++...++.++|+..++++|+..++.. +++ .++.+||+||..+++++|++|+++|+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~--------~~~~~Ty~eL~~~~~~~a~~L~~~gi~~ 73 (579)
T PRK09192 14 PRRYADFPTLVEALDYAALGEAGMNFYDR------------RGQ--------LEEALPYQTLRARAEAGARRLLALGLKP 73 (579)
T ss_pred cccccchhhHHHHHHHhhccCCceEEEec------------CCC--------EEEEecHHHHHHHHHHHHHHHHHhCCCC
Confidence 45566778999999999999887655421 221 2357999999999999999999999999
Q ss_pred CCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCC-------HHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCcc
Q 006354 155 DTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLG-------EDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIK 227 (649)
Q Consensus 155 gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~ 227 (649)
||+|+++++|+++++++++||+++|++++|+++.++ .+++.++++.++++++|++....+.+.+.....+
T Consensus 74 gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~--- 150 (579)
T PRK09192 74 GDRVALIAETDGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNP--- 150 (579)
T ss_pred CCEEEEEcCCchhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcccc---
Confidence 999999999999999999999999999999987543 6899999999999999999887766655432211
Q ss_pred EEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHH
Q 006354 228 NVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAI 307 (649)
Q Consensus 228 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~ 307 (649)
.+ ...++.++...... ........++++++|+|||||||.||||+++|++++..+...
T Consensus 151 ~~---------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~ 208 (579)
T PRK09192 151 LL---------------------HVLSHAWFKALPEA-DVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAI 208 (579)
T ss_pred cc---------------------ceeehhhhcccCCC-ccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHH
Confidence 00 11223332222111 111233467899999999999999999999999999988887
Q ss_pred Hh-hCCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHH
Q 006354 308 KT-LIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR 385 (649)
Q Consensus 308 ~~-~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~ 385 (649)
.. .+ ++.++|++++++|++|.+++.. ++.++..|+++.+.....+... +..++..+.++++++++..|..+..
T Consensus 209 ~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~----~~~~~~~i~~~~~t~~~~~~~~~~l 283 (579)
T PRK09192 209 SHDGL-KVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARR----PLQWLDLISRNRGTISYSPPFGYEL 283 (579)
T ss_pred Hhhcc-cCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHC----HHHHHHHHHhcCcEEEeCCcHHHHH
Confidence 77 66 8899999999999999999876 4567888998876432211111 1223333899999987765555544
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHH
Q 006354 386 VREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFI 465 (649)
Q Consensus 386 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~ 465 (649)
+....... ..+....+++|.+++||+++++++.+.+
T Consensus 284 ~~~~~~~~--------------------------------------------~~~~~~l~~lr~~~~gG~~l~~~~~~~~ 319 (579)
T PRK09192 284 CARRVNSK--------------------------------------------DLAELDLSCWRVAGIGADMIRPDVLHQF 319 (579)
T ss_pred HHHhhccc--------------------------------------------cccccchhhhheeEecCccCCHHHHHHH
Confidence 43211000 0000112479999999999999999888
Q ss_pred HhhcC------CccccccCcccccccccccCCCC----------------------------CCCCccCCCcccceEEEE
Q 006354 466 NICMG------APIGQAYGLTETCAGSTFSEWDD----------------------------PSVGRVGPPVPCCYIKLV 511 (649)
Q Consensus 466 ~~~~~------~~l~~~YG~TE~~~~~~~~~~~~----------------------------~~~~~vG~p~p~~~v~i~ 511 (649)
.+.+. ..+++.||+||++..++...... ...+++|+|+|+++++|+
T Consensus 320 ~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~ 399 (579)
T PRK09192 320 AEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIR 399 (579)
T ss_pred HHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEE
Confidence 87763 35899999999987665443211 012579999999999999
Q ss_pred ecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCc
Q 006354 512 SWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHG 591 (649)
Q Consensus 512 d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G 591 (649)
| +++.. ++.|+.|||+|+|++++.||+++ +.+.+.|. .+ +||+|||+|++ ++|+++++||.||+||+ +|
T Consensus 400 d-~~~~~---~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~--~d--gw~~TGDlg~~-~~G~l~~~GR~dd~i~~-~G 468 (579)
T PRK09192 400 N-EAGMP---LPERVVGHICVRGPSLMSGYFRD-EESQDVLA--AD--GWLDTGDLGYL-LDGYLYITGRAKDLIII-NG 468 (579)
T ss_pred C-CCCCC---CCCCCEEEEEecCCchhhhhcCC-cccccccc--CC--ceeeccceeeE-ECCEEEEEeccccEEEE-CC
Confidence 9 44443 67889999999999999999999 66777765 56 89999999999 89999999999999998 59
Q ss_pred eeeeCChhhhHhccCccccc-ceEEEecCCCC
Q 006354 592 EYISLGKIPSTTTVLPLLFH-HIRLWRNGPMK 622 (649)
Q Consensus 592 ~~v~~~eIE~~l~~~p~V~~-~~~V~g~~~~~ 622 (649)
++|+|.|||++|.+||+|.. +|+|++..++.
T Consensus 469 ~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~ 500 (579)
T PRK09192 469 RNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN 500 (579)
T ss_pred CccCHHHHHHHHHhcCCccCCcEEEEEeccCC
Confidence 99999999999999999962 58888888764
No 105
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=6.5e-55 Score=481.48 Aligned_cols=428 Identities=19% Similarity=0.186 Sum_probs=349.0
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.++|+++++.+|+++|+.. ++. .+||+||.++++++|..|.++|+++|++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~------------~~~-----------~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~ 58 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDY------------LGE-----------KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVF 58 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEe------------CCc-----------EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 4688999999999999999875 333 69999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+.+++++++||+++|++++|+++.++.+++.++++.+++++++++.+.... ..
T Consensus 59 ~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----------------- 114 (503)
T PRK04813 59 GHMSPEMLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLE-------IL----------------- 114 (503)
T ss_pred cCCCHHHHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEeccccccc-------cc-----------------
Confidence 999999999999999999999999999999999999999999999998764100 00
Q ss_pred CCCCCCCCceEeehHHHHhcC--CCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcE
Q 006354 242 GVSGGISNWTVSSFSEVEKLG--KRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDV 319 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~ 319 (649)
.+....++++.... ...........++++++++|||||||.||+|.+||+++...+.+....+ .+..+++
T Consensus 115 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-~~~~~~~ 186 (503)
T PRK04813 115 -------GIPVITLDELKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDF-ALPEGPQ 186 (503)
T ss_pred -------CCcEEehHHhhhhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHc-CCCcCce
Confidence 11222233322211 1111112345678899999999999999999999999999988888888 8899999
Q ss_pred EEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcc
Q 006354 320 YLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGG 399 (649)
Q Consensus 320 ~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~ 399 (649)
++..+|++|..++..++.++..|+++++.+.....+ ...+...++++++|++..+|++++.+......
T Consensus 187 ~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~-----~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~------- 254 (503)
T PRK04813 187 FLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTAN-----FKQLFETLPQLPINVWVSTPSFADMCLLDPSF------- 254 (503)
T ss_pred eeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcC-----HHHHHHHHHHcCCeEEEeChHHHHHHHHhhcc-------
Confidence 999999999999888888999999998854322222 12233338999999999999999876542110
Q ss_pred hhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccccccC
Q 006354 400 LTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAPIGQAYG 478 (649)
Q Consensus 400 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG 478 (649)
.....+++|.++++|+++++.+.+++.+.+ ++++++.||
T Consensus 255 ----------------------------------------~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG 294 (503)
T PRK04813 255 ----------------------------------------NEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYG 294 (503)
T ss_pred ----------------------------------------CcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcc
Confidence 011124899999999999999999999887 789999999
Q ss_pred cccccccccccCCC-----CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhc
Q 006354 479 LTETCAGSTFSEWD-----DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYK 553 (649)
Q Consensus 479 ~TE~~~~~~~~~~~-----~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~ 553 (649)
+||++...+..... .....++|+|.++++++|+| +++.. ++.|+.|||+|+|++++.||+++++.|.+.|.
T Consensus 295 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~---~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 370 (503)
T PRK04813 295 PTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTK---LPDGEQGEIVISGPSVSKGYLNNPEKTAEAFF 370 (503)
T ss_pred cchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCC---CCCCCceEEEEeccccccccCCChhHhHHhhc
Confidence 99987655432221 22346799999999999998 55543 67889999999999999999999999999885
Q ss_pred cCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcc
Q 006354 554 VDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLA 624 (649)
Q Consensus 554 ~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~ 624 (649)
. .+|.+||+|||+|++ +||++++.||.||+||+ +|++|+|.+||++|.+||+|. +++|++..+...+
T Consensus 371 ~-~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~-~~~v~~~~~~~~~ 437 (503)
T PRK04813 371 T-FDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKL-NGYRIELEEIEQNLRQSSYVE-SAVVVPYNKDHKV 437 (503)
T ss_pred c-CCCceeEECCceEEe-eCCeEEEeccccceEEE-CcEEeCHHHHHHHHHhCCCcc-eEEEEEeeCCCCc
Confidence 2 244479999999999 89999999999999998 599999999999999999999 9999987665444
No 106
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-54 Score=480.06 Aligned_cols=437 Identities=19% Similarity=0.215 Sum_probs=349.0
Q ss_pred HHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHH
Q 006354 89 EQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW 168 (649)
Q Consensus 89 ~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~ 168 (649)
...++++|+++|+.+.. +++ .+||+||.++++++|++|.++|+++|++|+++++|++++
T Consensus 4 ~~~a~~~p~~~a~~~~~----------~~~-----------~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~ 62 (511)
T PRK13391 4 GIHAQTTPDKPAVIMAS----------TGE-----------VVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY 62 (511)
T ss_pred hhhHhhCCCceEEEecC----------CCC-----------EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH
Confidence 46788999999998631 233 699999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCC
Q 006354 169 FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGIS 248 (649)
Q Consensus 169 vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 248 (649)
+++++||+++|++++|+++.++.+++.+++++++++.++++......+..+....+.....+.+......
T Consensus 63 ~~~~~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 132 (511)
T PRK13391 63 LEVCWAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGEL---------- 132 (511)
T ss_pred HHHHHHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCC----------
Confidence 9999999999999999999999999999999999999999998877776665555555555554432110
Q ss_pred CceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEe--chHHHHHH---HHHHHhhCCCCCCCcEEEEc
Q 006354 249 NWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMI--THGNIVAT---AAAIKTLIPNPGRSDVYLAY 323 (649)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~--th~~l~~~---~~~~~~~~~~~~~~d~~l~~ 323 (649)
.....+++..... +. ....+.++.++++|||||||.||||++ +|.++... .......+ .+.+++++++.
T Consensus 133 -~~~~~~~~~~~~~---~~-~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ 206 (511)
T PRK13391 133 -EGFVGYAEAVAGL---PA-TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW-GFRSDMVYLSP 206 (511)
T ss_pred -cccccHHHHhcCC---CC-CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhc-CCCCCCeEEEc
Confidence 1122333332211 11 112234567899999999999999995 56665432 23334455 77888999999
Q ss_pred cChHHHHHHHHHHHHHHhCceEEeC---CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcch
Q 006354 324 LPLAHVLELAAESIMLCAGCAIGYG---STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGL 400 (649)
Q Consensus 324 ~pl~h~~~~~~~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~ 400 (649)
+|++|.+++...+.++..|+++++. ++..+.+. ++++++|++.++|+++..+........
T Consensus 207 ~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----------i~~~~~t~~~~~p~~~~~l~~~~~~~~------ 269 (511)
T PRK13391 207 APLYHSAPQRAVMLVIRLGGTVIVMEHFDAEQYLAL-----------IEEYGVTHTQLVPTMFSRMLKLPEEVR------ 269 (511)
T ss_pred CCHHHHHHHHHHHHHHHcCceEEECCCCCHHHHHHH-----------HHHhCCeEEEehHHHHHHHHhCchhhc------
Confidence 9999999988888899999999984 33444444 999999999999999988764211100
Q ss_pred hHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcc
Q 006354 401 TKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLT 480 (649)
Q Consensus 401 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~T 480 (649)
++...+++|.+++||+++++++.+.+++.+|..+++.||+|
T Consensus 270 ---------------------------------------~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~t 310 (511)
T PRK13391 270 ---------------------------------------DKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAAT 310 (511)
T ss_pred ---------------------------------------ccCCccceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccc
Confidence 00112489999999999999999999998899999999999
Q ss_pred cccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcc
Q 006354 481 ETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGM 559 (649)
Q Consensus 481 E~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~ 559 (649)
|++.++...... ....+++|+|+++ .++|+| +++.. ++.|+.|||+++|+ ++.||+++++.+++.|..+ +
T Consensus 311 E~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d-~~~~~---~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~-~-- 381 (511)
T PRK13391 311 EGLGFTACDSEEWLAHPGTVGRAMFG-DLHILD-DDGAE---LPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPD-G-- 381 (511)
T ss_pred cccceEEecCccccccCCCcCCcccc-eEEEEC-CCCCC---CCCCCceEEEEecC-cceEEcCChhHhHHhhccC-C--
Confidence 998765543322 2345799999999 689998 55543 57889999999999 8999999999999988632 3
Q ss_pred cceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhh
Q 006354 560 CWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKI 629 (649)
Q Consensus 560 ~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~ 629 (649)
+||+|||+|++++||.+++.||.||++|+ +|++|+|.+||++|.+||.|. +|+|++.++...++.+.+
T Consensus 382 ~w~~TGD~g~~~~~g~l~~~gR~~~~i~~-~G~~v~~~eie~~l~~~~~v~-~~~v~~~~~~~~g~~~~~ 449 (511)
T PRK13391 382 TWSTVGDIGYVDEDGYLYLTDRAAFMIIS-GGVNIYPQEAENLLITHPKVA-DAAVFGVPNEDLGEEVKA 449 (511)
T ss_pred CEEecCCEEEECCCccEEEeccCCCEEEe-CCEEECHHHHHHHHHhCCCcc-eEEEEecCCcccCceeEE
Confidence 89999999999999999999999999997 599999999999999999999 999999988877655433
No 107
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-55 Score=514.71 Aligned_cols=461 Identities=17% Similarity=0.183 Sum_probs=341.0
Q ss_pred cccccccccCCCCCCCCCCccccccCCCCcccccCCCCCCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCcccee
Q 006354 43 ARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEK 122 (649)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~ 122 (649)
|+.. ++.+.+++..+..++.++..... ....|+.++|+++++++||++|+.+ +++
T Consensus 417 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~------~~~~sl~~ll~~~a~~~pd~~Al~~------------~~~---- 471 (994)
T PRK07868 417 ANRS---VRTLAVETARTLPRLARLGQIND------HTRISLGRIIAEQARDAPKGEFLLF------------DGR---- 471 (994)
T ss_pred hhhh---hHHHHHHHHHhhhhHHHhhhcCC------CCCccHHHHHHHHHHHCCCCeEEEe------------CCc----
Confidence 5555 77888888999988866655221 3446899999999999999999986 443
Q ss_pred ecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcC
Q 006354 123 LHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQ 202 (649)
Q Consensus 123 ~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~ 202 (649)
.+||+||.++++++|++|+++|+++||+|+|+++|+++++++++||+++|++++|++|. +++.+++++++
T Consensus 472 -------~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~ 541 (994)
T PRK07868 472 -------VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGG 541 (994)
T ss_pred -------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccC
Confidence 69999999999999999999999999999999999999999999999999999999985 68999999999
Q ss_pred ceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCC--CCCCCCCCCCeEEE
Q 006354 203 VTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSP--VDPSLPSQNGVAVI 280 (649)
Q Consensus 203 ~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i 280 (649)
++++|++.+..+.+... ...+++++...... ...+.......+++........+ ..+.+..++|+|+|
T Consensus 542 ~~~li~~~~~~~~~~~~------~~~iiv~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I 611 (994)
T PRK07868 542 VTEIITDPTNLEAARQL------PGRVLVLGGGESRD----LDLPDDADVIDMEKIDPDAVELPGWYRPNPGLARDLAFI 611 (994)
T ss_pred CeEEEEChHHHHHHHhc------CceEEEecCCcccc----ccCCcchhhhhhhhcCcccccCCcccCCCCCCCCccEEE
Confidence 99999998776655432 23455554321100 00000001111221111100000 01112236899999
Q ss_pred EeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHHHHHH-HHhCceEEe---CCccccccc
Q 006354 281 MYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIM-LCAGCAIGY---GSTLTMTDT 356 (649)
Q Consensus 281 ~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~-l~~G~~l~~---~~~~~l~~~ 356 (649)
+|| ||||.||++.++|.+...........+ .+.++|++++.+|++|++++...+.+ +..|+++++ +++..+.+.
T Consensus 612 iyT-gStgtpKpk~vt~~~~~~~~~~~~~~~-~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~ 689 (994)
T PRK07868 612 AFS-TAGGELVAKQITNYRWALSAFGTASAA-ALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQE 689 (994)
T ss_pred EEe-CCCCCcCcEEEehHHHHHHHHhhhhhc-CCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHH
Confidence 999 588888888888877665555555556 78899999999999999999876555 455555555 344445555
Q ss_pred chhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHH
Q 006354 357 SSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVF 436 (649)
Q Consensus 357 ~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (649)
|+++++|+++++|++++.+.+.....
T Consensus 690 -----------I~~~~vT~~~~~Ps~l~~L~~~~~~~------------------------------------------- 715 (994)
T PRK07868 690 -----------VRQYGVTVVSYTWAMLREVVDDPAFV------------------------------------------- 715 (994)
T ss_pred -----------HHHhCCcEEEeHHHHHHHHHhCcCCc-------------------------------------------
Confidence 99999999999999999887531000
Q ss_pred HHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcC-CccccccCcccccccccccCCCCCCCCccCCCcccc-eEEEEe--
Q 006354 437 KSVRAVLGGRIRFMICGGAPLSADSQRFINICMG-APIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCC-YIKLVS-- 512 (649)
Q Consensus 437 ~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~-~v~i~d-- 512 (649)
....++||.++ |+.+++++.+.+.+.++ +++++.||+||++...+.. ...+.+++|+|+||+ +++|.+
T Consensus 716 ----~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~~--~~~~~~svG~p~pg~~~v~i~~~d 787 (994)
T PRK07868 716 ----LHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLANV--SGAKIGSKGRPLPGAGRVELAAYD 787 (994)
T ss_pred ----cCCCCceEEEe--cCCCCHHHHHHHHHHhCchheeeeeeccccccccccc--CCCCCcccCCccCCCCceeEEEec
Confidence 00113789776 34599999999998885 8899999999987654322 234568999999998 676642
Q ss_pred c-------CCCCcccCCCCCCccEEEEccccccccccCCCccchh--hhccCCCcccceeeCcEEEEccCCeEEEEecCC
Q 006354 513 W-------DEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSE--VYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKK 583 (649)
Q Consensus 513 ~-------~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~--~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~d 583 (649)
+ ++.++...+++|+.|||+++|+. |+ +|+.+.. .| .++.|||+|||+|++|+||+|+|+||+|
T Consensus 788 ~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~----~~-~p~~t~~~~~~---~~~dgw~~TGDlg~~d~dG~l~~~GR~d 859 (994)
T PRK07868 788 PEHDLILEDDRGFVRRAEVNEVGVLLARARG----PI-DPTASVKRGVF---APADTWISTEYLFRRDDDGDYWLVDRRG 859 (994)
T ss_pred CcCCceeecCCceEEEcCCCCceEEEEecCC----CC-ChhhhhHhccc---ccCCEEEeccceEEEcCCCCEEEeccCC
Confidence 1 12232233678999999999975 33 4554433 24 2233999999999999999999999999
Q ss_pred CeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCC
Q 006354 584 DIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMK 622 (649)
Q Consensus 584 d~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~ 622 (649)
|+||+. |++|+|+|||++|.+||.|. +|+|++.+++.
T Consensus 860 d~Ik~~-G~~I~p~EIE~~L~~hp~V~-~aaVvg~~d~~ 896 (994)
T PRK07868 860 SVIRTA-RGPVYTEPVTDALGRIGGVD-LAVTYGVEVGG 896 (994)
T ss_pred CEEEeC-CceEcHHHHHHHHhcCCCee-EEEEEeecCCC
Confidence 999974 88999999999999999999 99999998876
No 108
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.9e-55 Score=476.32 Aligned_cols=391 Identities=21% Similarity=0.258 Sum_probs=327.3
Q ss_pred HHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHH
Q 006354 89 EQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW 168 (649)
Q Consensus 89 ~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~ 168 (649)
+.+++++|+++|+.. +++ .+||+||.++++++|+.|.+.|+.+||+|+++++|++++
T Consensus 10 ~~~a~~~~~~~a~~~------------~~~-----------~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~ 66 (458)
T PRK09029 10 RHWAQVRPQAIALRL------------NDE-----------VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPET 66 (458)
T ss_pred HHHHHhCCCceeeec------------CCc-----------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH
Confidence 566899999999975 333 599999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCC
Q 006354 169 FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGIS 248 (649)
Q Consensus 169 vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 248 (649)
+++++||+++|++++|+++.++++++..+++++++++++++.+... +... ....
T Consensus 67 ~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~-------~~~~------------------ 120 (458)
T PRK09029 67 LLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSAL-------TSLH------------------ 120 (458)
T ss_pred HHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhc-------cccc------------------
Confidence 9999999999999999999999999999999999999999876422 1100 0000
Q ss_pred CceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChHH
Q 006354 249 NWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAH 328 (649)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h 328 (649)
.. . ..........++++++++|||||||.||||++||++++..+......+ .+.++|+++..+|++|
T Consensus 121 ------~~-----~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~h 187 (458)
T PRK09029 121 ------LQ-----L-VEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLM-PFTAQDSWLLSLPLFH 187 (458)
T ss_pred ------cc-----c-ccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcC-CCCccceEEEecCcHh
Confidence 00 0 000112344678999999999999999999999999999988888877 8889999999999999
Q ss_pred HHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 006354 329 VLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIG 408 (649)
Q Consensus 329 ~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a 408 (649)
.+++...+.++..|+++++.+...+.+. + .++|.+..+|+++..+......
T Consensus 188 ~~g~~~~~~~l~~G~~v~~~~~~~~~~~-----------i--~~~t~~~~~P~~~~~l~~~~~~---------------- 238 (458)
T PRK09029 188 VSGQGIVWRWLYAGATLVVRDKQPLEQA-----------L--AGCTHASLVPTQLWRLLDNRSE---------------- 238 (458)
T ss_pred hhhhHHHHHHHhCCceEEeCChHHHHHH-----------H--hhceeeecChHHHHHHHhcccc----------------
Confidence 9998777788999999998665444433 4 3789999999999887653110
Q ss_pred HHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcccccccccc
Q 006354 409 YKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTF 488 (649)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~ 488 (649)
..++|.+++||+++++.+.++++.. +.++++.||+||++...+.
T Consensus 239 -----------------------------------~~~l~~i~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~ 282 (458)
T PRK09029 239 -----------------------------------PLSLKAVLLGGAAIPVELTEQAEQQ-GIRCWCGYGLTEMASTVCA 282 (458)
T ss_pred -----------------------------------CCcceEEEECCCCCCHHHHHHHHHc-CCcEeccccccccCcceec
Confidence 0269999999999999999998864 9999999999999875554
Q ss_pred cCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEE
Q 006354 489 SEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIG 568 (649)
Q Consensus 489 ~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg 568 (649)
.... ...++|+|+++++++|++ |||+|+|+.++.||+++++.+.... .+ |||+|||+|
T Consensus 283 ~~~~--~~~~~G~~~~~~~~~i~~---------------gel~v~g~~~~~gY~~~~~~~~~~~---~~--~~~~TGD~~ 340 (458)
T PRK09029 283 KRAD--GLAGVGSPLPGREVKLVD---------------GEIWLRGASLALGYWRQGQLVPLVN---DE--GWFATRDRG 340 (458)
T ss_pred cCCC--CCCCCCCCCCCCEEEEeC---------------CEEEEecCceeeeeecCcccccccc---CC--CccCCCCcE
Confidence 3322 235699999999999975 8999999999999999998876433 44 899999999
Q ss_pred EEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhh
Q 006354 569 QVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQ 631 (649)
Q Consensus 569 ~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~ 631 (649)
++| ||++++.||+||+||+ +|++|+|.|||++|.+||+|. +|+|++.+++..++.+.++.
T Consensus 341 ~~~-~g~l~~~gR~~d~i~~-~G~~v~p~eiE~~l~~~~~v~-~~~v~~~~~~~~~~~~~a~v 400 (458)
T PRK09029 341 EWQ-NGELTILGRLDNLFFS-GGEGIQPEEIERVINQHPLVQ-QVFVVPVADAEFGQRPVAVV 400 (458)
T ss_pred EEe-CCEEEEecccccceee-CCEEeCHHHHHHHHhcCCCcc-eEEEEccCCcccCceEEEEE
Confidence 999 9999999999999997 599999999999999999999 99999999988776554443
No 109
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.6e-54 Score=476.42 Aligned_cols=453 Identities=18% Similarity=0.218 Sum_probs=354.7
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
-|+.++|+++++++|+++|+.+ +++ .+||+||.++++++|+.|.+.|+++||+|+|+
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~------------~~~-----------~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~ 59 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVC------------GDR-----------RLTYAELEERANRLAHYLIAQGLGPGDHVGIY 59 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEE------------CCc-----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 3799999999999999999986 333 69999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDS 241 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~ 241 (649)
++|+++++++++||+++|++++|+++.++.+++.++++++++++++++.+....+.++....+.++.++.+++.....
T Consensus 60 ~~n~~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 137 (533)
T PRK07798 60 ARNRIEYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGND-- 137 (533)
T ss_pred cCCCHHHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccc--
Confidence 999999999999999999999999999999999999999999999999988877777766666677777766443211
Q ss_pred CCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC--------CC
Q 006354 242 GVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI--------PN 313 (649)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~--------~~ 313 (649)
......+++++........ .... ..++.++|+|||||||.||+|+++|+++..........+ ..
T Consensus 138 ------~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (533)
T PRK07798 138 ------LLPGAVDYEDALAAGSPER-DFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEE 209 (533)
T ss_pred ------cCCccccHHHHHhccCCcC-CCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhh
Confidence 0112456677665433221 1112 234557999999999999999999999887655432211 01
Q ss_pred C------CCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHH-H
Q 006354 314 P------GRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDR-V 386 (649)
Q Consensus 314 ~------~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~-l 386 (649)
+ ..+++++..+|++|..+++.++.+++.|+++++.+.. ..+ ...++..++++++|.+.++|..+.. +
T Consensus 210 ~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~-~~~-----~~~~~~~i~~~~~t~~~~~~~~~~~~l 283 (533)
T PRK07798 210 LAKRAAAGPGMRRFPAPPLMHGAGQWAAFAALFSGQTVVLLPDV-RFD-----ADEVWRTIEREKVNVITIVGDAMARPL 283 (533)
T ss_pred hcccccCCCCceEEEecchhhhhhHHHHHHHHhcCceEEEecCC-CcC-----HHHHHHHHHHhCCeEEEechHHHHHHH
Confidence 1 4678999999999999999889999999999996522 111 2233444999999999999877654 3
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHH
Q 006354 387 REGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFIN 466 (649)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~ 466 (649)
...+. . ......+++|.+++||+++++++.++|+
T Consensus 284 ~~~~~-~---------------------------------------------~~~~~~~~l~~i~~gG~~~~~~~~~~~~ 317 (533)
T PRK07798 284 LDALE-A---------------------------------------------RGPYDLSSLFAIASGGALFSPSVKEALL 317 (533)
T ss_pred HHHhc-c---------------------------------------------cccCCCCceEEEEECCCCCCHHHHHHHH
Confidence 22111 0 0011225899999999999999999999
Q ss_pred hhc-CCccccccCcccccccccccCCCCCCCCccC--CCcccceEEEEecCCCCcccCCCCCCc--cEEEEccccccccc
Q 006354 467 ICM-GAPIGQAYGLTETCAGSTFSEWDDPSVGRVG--PPVPCCYIKLVSWDEGGYKTSDKPMPR--GEIVVGGFNVTAGY 541 (649)
Q Consensus 467 ~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG--~p~p~~~v~i~d~~~~~~~~~~~~g~~--GEl~v~g~~v~~gY 541 (649)
+.+ +..+++.||+||++.+........ ....| ++.++..++|+| +++.. +++|+. |+|+. ++.++.||
T Consensus 318 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~--~~~~g~~~~~~~~~~~i~~-~~~~~---~~~g~~~~g~l~~-~~~~~~gy 390 (533)
T PRK07798 318 ELLPNVVLTDSIGSSETGFGGSGTVAKG--AVHTGGPRFTIGPRTVVLD-EDGNP---VEPGSGEIGWIAR-RGHIPLGY 390 (533)
T ss_pred HHcCCCeEEeeecccccccccccCCCCC--CccCCCCccCCCceEEEEC-CCCCC---CCCCCCCeeEEEe-ecCccccc
Confidence 887 789999999999866554332211 12334 788999999998 44443 567766 77764 56799999
Q ss_pred cCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCC
Q 006354 542 FNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPM 621 (649)
Q Consensus 542 ~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~ 621 (649)
+++++.|++.|.. .++.+||+|||+|++|+||+++++||.||+||. +|++|+|.+||++|.++|.|. +++|++..+.
T Consensus 391 ~~~~~~t~~~f~~-~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~v~-~~~v~~~~~~ 467 (533)
T PRK07798 391 YKDPEKTAETFPT-IDGVRYAIPGDRARVEADGTITLLGRGSVCINT-GGEKVFPEEVEEALKAHPDVA-DALVVGVPDE 467 (533)
T ss_pred cCChhhhHHhhcc-CCCCceEEcCcEEEEcCCCcEEEEccccceEec-CCEEeCHHHHHHHHHhCccce-eEEEEeccCc
Confidence 9999999999853 234479999999999999999999999999997 599999999999999999999 9999998877
Q ss_pred Ccccchhh
Q 006354 622 KLASSTKI 629 (649)
Q Consensus 622 ~~~~~~~~ 629 (649)
..++.+.+
T Consensus 468 ~~~~~~~~ 475 (533)
T PRK07798 468 RWGQEVVA 475 (533)
T ss_pred ccCceEEE
Confidence 65544433
No 110
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=7.2e-55 Score=472.07 Aligned_cols=371 Identities=15% Similarity=0.162 Sum_probs=303.7
Q ss_pred EeHHHHHHHHHHHHHHHHHCCC-CCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEEC
Q 006354 131 QTYGEVFDRACSFASGLVNFGH-NVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD 209 (649)
Q Consensus 131 ~TY~eL~~~~~~lA~~L~~~Gv-~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (649)
+.|+||.++++++|++|++.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++++++++++++
T Consensus 20 ~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~ 99 (452)
T PRK07445 20 YNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGL 99 (452)
T ss_pred cChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEec
Confidence 6899999999999999999988 579999999999999999999999999999999999999999999999999999987
Q ss_pred chhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCC
Q 006354 210 SKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGL 289 (649)
Q Consensus 210 ~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~ 289 (649)
.+..... .. . . . . ......++++++++|||||||.
T Consensus 100 ~~~~~~~---------------~~-----~----------~-----------~-~---~~~~~~~~~~~~i~~TSGTTG~ 134 (452)
T PRK07445 100 DQLKLSH---------------PP-----P----------L-----------P-S---QGILPNLETGWIMIPTGGSSGQ 134 (452)
T ss_pred Ccccccc---------------CC-----C----------C-----------C-c---cccCCCCCCcEEEEeCCCCCCC
Confidence 6532100 00 0 0 0 0 0112356899999999999999
Q ss_pred cceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccce
Q 006354 290 PKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVS 369 (649)
Q Consensus 290 PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~ 369 (649)
||||++||+++++.+......+ .+.+ +++++.+|++|.+++..++.+++.|+++++.+...+.+. .....
T Consensus 135 PKgV~~t~~~l~~~~~~~~~~~-~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~--------~~~~~ 204 (452)
T PRK07445 135 IRFAIHTWETLTASVQGFQRYF-QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSG--------QELPP 204 (452)
T ss_pred CcEEEechHHHHHHHHHHHHHh-cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccch--------hhhhh
Confidence 9999999999998888877766 6654 467889999999999888889999999998653222211 01134
Q ss_pred eecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEE
Q 006354 370 VLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRF 449 (649)
Q Consensus 370 ~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~ 449 (649)
.+++|++.++|++++.+.+.... ..++||.
T Consensus 205 ~~~~t~~~~vP~~l~~l~~~~~~--------------------------------------------------~l~~l~~ 234 (452)
T PRK07445 205 NPSDFFLSLVPTQLQRLLQLRPQ--------------------------------------------------WLAQFRT 234 (452)
T ss_pred hcCceEEEehHHHHHHHHhhChh--------------------------------------------------hhhcceE
Confidence 67899999999999988651100 0137999
Q ss_pred EEecCCCCCHHHHHHHHhhcCCccccccCcccccccccccCCCC--CCCCccCCCcccceEEEEecCCCCcccCCCCCCc
Q 006354 450 MICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPR 527 (649)
Q Consensus 450 i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~ 527 (649)
+++||+++++++.+.++. +++++++.||+||++..++.....+ ...+++|+|+|+++++|+ .|+.
T Consensus 235 i~~gG~~l~~~~~~~~~~-~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~------------~g~~ 301 (452)
T PRK07445 235 ILLGGAPAWPSLLEQARQ-LQLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP------------ANQT 301 (452)
T ss_pred EEECCccCCHHHHHHHHh-cCCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc------------CCCc
Confidence 999999999999888876 4899999999999876554433222 235789999999999997 2467
Q ss_pred cEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCc
Q 006354 528 GEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLP 607 (649)
Q Consensus 528 GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p 607 (649)
|||+|+|++++.||++++.. .+ +||+|||+|++|+||+++|.||.||+||+ +|++|+|.|||++|.+||
T Consensus 302 Gel~v~g~~~~~gY~~~~~~--------~~--g~~~TGDl~~~d~dG~l~~~GR~dd~I~~-~G~~V~p~eIE~~l~~~p 370 (452)
T PRK07445 302 GNITIQAQSLALGYYPQILD--------SQ--GIFETDDLGYLDAQGYLHILGRNSQKIIT-GGENVYPAEVEAAILATG 370 (452)
T ss_pred ceEEEeCCccchhhcCCccC--------CC--CEEECCCEEEEcCCCCEEEEeecCCEEEE-CCEEECHHHHHHHHHhCC
Confidence 99999999999999985431 34 89999999999999999999999999997 599999999999999999
Q ss_pred ccccceEEEecCCCCcccchhhhh
Q 006354 608 LLFHHIRLWRNGPMKLASSTKIFQ 631 (649)
Q Consensus 608 ~V~~~~~V~g~~~~~~~~~~~~~~ 631 (649)
+|. +|+|+|.+++..|+.+.++.
T Consensus 371 ~V~-~a~V~g~~~~~~g~~~~a~v 393 (452)
T PRK07445 371 LVQ-DVCVLGLPDPHWGEVVTAIY 393 (452)
T ss_pred Ccc-eEEEEeccCcCCCcEEEEEE
Confidence 999 99999999888776554443
No 111
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-53 Score=468.93 Aligned_cols=418 Identities=21% Similarity=0.254 Sum_probs=337.8
Q ss_pred EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEEC
Q 006354 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD 209 (649)
Q Consensus 130 ~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (649)
.+||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++++++++++++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhccCC-CccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCC
Q 006354 210 SKQLKKLSAVSSSLK-TIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTG 288 (649)
Q Consensus 210 ~~~~~~l~~~~~~~~-~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG 288 (649)
......+.+.....+ .++.++..+... .....+++...... .......++.++++|||||||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSGtTG 153 (502)
T PRK08276 91 AALADTAAELAAELPAGVPLLLVVAGPV-------------PGFRSYEEALAAQP----DTPIADETAGADMLYSSGTTG 153 (502)
T ss_pred cchhhHHHHHhhhccccccEEEEeCCCC-------------CccccHHHHHhcCC----CCCCCCCCcceEEEECCCCCC
Confidence 888777666554444 455555542211 11234554433221 112235677899999999999
Q ss_pred CcceEEechHHHHHHHH------HHHhhCCCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCC---cccccccchh
Q 006354 289 LPKGVMITHGNIVATAA------AIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGS---TLTMTDTSSK 359 (649)
Q Consensus 289 ~PKgV~~th~~l~~~~~------~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~---~~~l~~~~~~ 359 (649)
.||+|+++|.++..... ...... ....++++++.+|++|.+++...+.++..|+++++.+ +..+.+.
T Consensus 154 ~PK~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--- 229 (502)
T PRK08276 154 RPKGIKRPLPGLDPDEAPGMMLALLGFGM-YGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALAL--- 229 (502)
T ss_pred CCceEEEccCCcchhhhhHHhhhhhhhcc-cCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHH---
Confidence 99999999887654321 111122 2346789999999999999888788999999998843 4444444
Q ss_pred hccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHH
Q 006354 360 IKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSV 439 (649)
Q Consensus 360 ~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (649)
++++++|++.++|+++..+.........
T Consensus 230 --------i~~~~~t~~~~~P~~~~~l~~~~~~~~~-------------------------------------------- 257 (502)
T PRK08276 230 --------IERYRVTHSQLVPTMFVRMLKLPEEVRA-------------------------------------------- 257 (502)
T ss_pred --------HHHhCCeEEEehHHHHHHHHhCccccCC--------------------------------------------
Confidence 9999999999999999888753211000
Q ss_pred HHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCc
Q 006354 440 RAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGY 518 (649)
Q Consensus 440 ~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~ 518 (649)
..+.+++|.+++||+++++++.+++.+.++..+++.||+||++.++...... ....+++|+|+ +++++|+| +++..
T Consensus 258 -~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~ 334 (502)
T PRK08276 258 -RYDVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILD-EDGNE 334 (502)
T ss_pred -CCCcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEEC-CCCCC
Confidence 0112489999999999999999999998899999999999998765544332 23457899999 88999998 55543
Q ss_pred ccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCCh
Q 006354 519 KTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGK 598 (649)
Q Consensus 519 ~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~e 598 (649)
++.|+.|||+++|+.++.||+++++.+.+.|. .+ +||+|||+|++++||.+++.||.||+||+ +|++|++.+
T Consensus 335 ---~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~~--~~~~TGD~~~~~~~g~~~~~GR~~~~i~~-~G~~v~~~~ 406 (502)
T PRK08276 335 ---LPPGEIGTVYFEMDGYPFEYHNDPEKTAAARN--PH--GWVTVGDVGYLDEDGYLYLTDRKSDMIIS-GGVNIYPQE 406 (502)
T ss_pred ---CcCCCceEEEEECCCccchhcCCHHHHHHHhc--CC--CceeecceEEEcCCcCEEEeccCcceEEe-CCEEeCHHH
Confidence 67899999999999999999999999999987 55 89999999999999999999999999997 599999999
Q ss_pred hhhHhccCcccccceEEEecCCCCcccchhhhhh
Q 006354 599 IPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQS 632 (649)
Q Consensus 599 IE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~~ 632 (649)
||.+|.+||+|. +|+|++..++..++...++..
T Consensus 407 iE~~i~~~~~v~-~~~v~~~~~~~~~~~~~~~v~ 439 (502)
T PRK08276 407 IENLLVTHPKVA-DVAVFGVPDEEMGERVKAVVQ 439 (502)
T ss_pred HHHHHHhCCCcc-eEEEEeCCCcccCceEEEEEE
Confidence 999999999999 999999998876655444333
No 112
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.8e-54 Score=457.29 Aligned_cols=461 Identities=18% Similarity=0.189 Sum_probs=361.8
Q ss_pred HHHHHHHHHh-CCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEcc
Q 006354 85 AALFEQSCKS-HPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAE 163 (649)
Q Consensus 85 ~~~~~~~a~~-~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ 163 (649)
..++++..+. .++.+++.++. ++. ++...+||.|+.+++.++|..|.+.|+++||+|++++|
T Consensus 67 ~n~~~~~~~~~~~~~~a~~~~~----------~~~-------~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mP 129 (626)
T KOG1175|consen 67 YNCLDRHIKEKGGDKVAIIFEG----------NEG-------GDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMP 129 (626)
T ss_pred HhhhhhhhhhcCCCCcEEEEEe----------cCC-------CceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEecc
Confidence 4444555444 48999999864 222 22234899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHH---------HHHhhccCCCc----cEEE
Q 006354 164 TCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKK---------LSAVSSSLKTI----KNVI 230 (649)
Q Consensus 164 ~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---------l~~~~~~~~~~----~~ii 230 (649)
+.+++++++|||.++|++.+++-..+++.++...+++++++++++.+..... ..++....+.. ...+
T Consensus 130 m~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~ 209 (626)
T KOG1175|consen 130 MIPEAVIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDL 209 (626)
T ss_pred CChHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceee
Confidence 9999999999999999999999999999999999999999999997643322 22222111111 1111
Q ss_pred EecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHH-HHHHHHh
Q 006354 231 YFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVA-TAAAIKT 309 (649)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~-~~~~~~~ 309 (649)
.+... -....+++........ .++...+.+|+.+|+|||||||.||++.+|+...+- .+.....
T Consensus 210 ~~~~~--------------~~d~~~~~~~~~a~~~-~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~ 274 (626)
T KOG1175|consen 210 IVSRR--------------NRDLFWSLELKKASPE-HPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRY 274 (626)
T ss_pred EEecc--------------cccccHHHHhhhcCCC-CCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcce
Confidence 11110 0123444444433332 236778899999999999999999999999887544 4444455
Q ss_pred hCCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHH
Q 006354 310 LIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVRE 388 (649)
Q Consensus 310 ~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~ 388 (649)
.+ .++++|++.++..+.|+.+-++ .+.+|++|++++++.-..+ + ...++..+.++++|++++.|+.++.+..
T Consensus 275 ~~-d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~-~-----~~~~~~~v~k~~it~l~t~pt~~r~l~~ 347 (626)
T KOG1175|consen 275 HF-DLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPF-D-----PGRIWKILDKYKVTVLYTAPTAYRLLRR 347 (626)
T ss_pred ec-cCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCC-C-----hhhhhhhHhhcceEEEEeccHHHHHHHH
Confidence 56 9999999999999999999877 5669999999999222111 1 2334444999999999999999998876
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhh
Q 006354 389 GVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINIC 468 (649)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~ 468 (649)
...+...... .++||.+.++||+++++...++...
T Consensus 348 ~~~~~~~~~~---------------------------------------------~~sLk~~~S~Gepi~~~~~ew~~~~ 382 (626)
T KOG1175|consen 348 LGQEDVTSYS---------------------------------------------LKSLRTCGSVGEPINPEAWEWWKRV 382 (626)
T ss_pred hccccccccc---------------------------------------------cceEEEEeecCccCCcchHHHHHHh
Confidence 4332221110 0279999999999999999999999
Q ss_pred cCC-ccccccCcccccccccccCCCC--CCCCccCCCcccceEEEEecCCCCcccCCCCC-CccEEEEccc---cccccc
Q 006354 469 MGA-PIGQAYGLTETCAGSTFSEWDD--PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPM-PRGEIVVGGF---NVTAGY 541 (649)
Q Consensus 469 ~~~-~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g-~~GEl~v~g~---~v~~gY 541 (649)
++. +|++.||.||++..+....... ..+++.|.|.+++.+.|+| ++++.. ++. +.|||+++.+ +.+++|
T Consensus 383 ~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~---~~~~~~G~l~~~~~~P~~~~r~~ 458 (626)
T KOG1175|consen 383 TGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNEL---PPSTGNGELRLKPPWPPGMFRTL 458 (626)
T ss_pred cCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCc---CCCCceeEEEEeCCCCccccccc
Confidence 987 6999999999999887666554 7789999999999999999 566653 333 8999999883 889999
Q ss_pred cCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCC
Q 006354 542 FNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPM 621 (649)
Q Consensus 542 ~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~ 621 (649)
|+|++.....+. ....|+|.|||.|++|+||++++.||.||+|+++ |+|+++.|||++|.+||.|. |++|+|.+++
T Consensus 459 ~~n~erf~~~yf--~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvs-GhRigtaEIE~al~~hp~Va-EsAvVg~p~~ 534 (626)
T KOG1175|consen 459 WGNHERFRAAYF--KKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVS-GHRIGTAEIESALVEHPAVA-ESAVVGSPDP 534 (626)
T ss_pred cCCHHHhhhhhc--ccCCceEEecCceEEcCCceEEEEeccccccccc-ceeecHHHHHHHHhhCcchh-heeeecCCCC
Confidence 999995444443 3223899999999999999999999999999985 99999999999999999999 9999999999
Q ss_pred Ccccchhhhhhhhhhc
Q 006354 622 KLASSTKIFQSCVTKL 637 (649)
Q Consensus 622 ~~~~~~~~~~~~~~~~ 637 (649)
..|+.+.+|..+++..
T Consensus 535 ~~ge~v~aFvvl~~g~ 550 (626)
T KOG1175|consen 535 IKGEVVLAFVVLKSGS 550 (626)
T ss_pred CCCeEEEEEEEEcCCC
Confidence 9999999999988773
No 113
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-53 Score=474.06 Aligned_cols=429 Identities=22% Similarity=0.312 Sum_probs=334.2
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.++.+.+...|+.+|+.+++... ++. +.+||.||.++++++|++|++.|+++||+|+|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~----------~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~ 60 (545)
T PRK07768 2 SRFTEKMYANARTSPRGMVTGEP-----------DAP----------VRHTWGEVHERARRIAGGLAAAGVGPGDAVAVL 60 (545)
T ss_pred chHHHHHHHHhhCCCcceEEecC-----------CCc----------eEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 46888888999999999988653 222 469999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHH-------HHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDAL-------IHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFEN 234 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~ 234 (649)
++|+++++++++||+++|++++|+++..+.+++ .++++.++++++++++.....+..+...
T Consensus 61 ~~~~~~~~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------------ 128 (545)
T PRK07768 61 AGAPVEIAPTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEK------------ 128 (545)
T ss_pred CCCchHHHHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhccc------------
Confidence 999999999999999999999999998886554 4567778999999987655433321110
Q ss_pred CCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCC
Q 006354 235 DGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP 314 (649)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~ 314 (649)
.+...+++++...... ......++++++|+|||||||.||||+++|+++.+.+......+ ++
T Consensus 129 --------------~~~~~~~~~l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-~~ 190 (545)
T PRK07768 129 --------------GIRVLTVADLLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAA-EF 190 (545)
T ss_pred --------------CCceeehhhhcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhc-CC
Confidence 1234455555443221 22345679999999999999999999999999999888887777 77
Q ss_pred CCC-cEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHH
Q 006354 315 GRS-DVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVK 392 (649)
Q Consensus 315 ~~~-d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~ 392 (649)
..+ |++++.+|++|..++.. .+.++..|+++++..+..+... +..+...++++++|++.++|.++..+...+..
T Consensus 191 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 266 (545)
T PRK07768 191 DVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRD----PLLWAELISKYRGTMTAAPNFAYALLARRLRR 266 (545)
T ss_pred CCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHh----HHHHHHHHHHhCCEEEECchHHHHHHHHHHhc
Confidence 766 89999999999999876 5567999999988654332221 11223338999999988877777665543211
Q ss_pred HHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhh---c
Q 006354 393 KVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINIC---M 469 (649)
Q Consensus 393 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~---~ 469 (649)
.... +....+++|.+++||+++++++.+.+.+. +
T Consensus 267 ~~~~-------------------------------------------~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~ 303 (545)
T PRK07768 267 QAKP-------------------------------------------GAFDLSSLRFALNGAEPIDPADVEDLLDAGARF 303 (545)
T ss_pred cccc-------------------------------------------cCCCchheeeEEeccCCCCHHHHHHHHHHHHhc
Confidence 1000 00112489999999999999998888764 4
Q ss_pred CC---ccccccCcccccccccccCCC--------------------------CCCCCccCCCcccceEEEEecCCCCccc
Q 006354 470 GA---PIGQAYGLTETCAGSTFSEWD--------------------------DPSVGRVGPPVPCCYIKLVSWDEGGYKT 520 (649)
Q Consensus 470 ~~---~l~~~YG~TE~~~~~~~~~~~--------------------------~~~~~~vG~p~p~~~v~i~d~~~~~~~~ 520 (649)
|. .+++.||+||++..++..... ....+++|+|+++++++|+| ++++.
T Consensus 304 g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~-- 380 (545)
T PRK07768 304 GLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQV-- 380 (545)
T ss_pred CCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCC--
Confidence 54 499999999998765443221 11236899999999999999 55554
Q ss_pred CCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhh
Q 006354 521 SDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIP 600 (649)
Q Consensus 521 ~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE 600 (649)
+++|+.|||+++|+.++.||++++......+ .+ +||+|||+|++++||.++++||.||+||+. |++|+|.+||
T Consensus 381 -~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~--g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~-G~~v~~~eiE 453 (545)
T PRK07768 381 -LPPRGVGVIELRGESVTPGYLTMDGFIPAQD---AD--GWLDTGDLGYLTEEGEVVVCGRVKDVIIMA-GRNIYPTDIE 453 (545)
T ss_pred -CCCCCEEEEEEccCcccccccCCCCCccccc---CC--CeeeccceEEEecCCEEEEEccccceEEEC-CEecCHHHHH
Confidence 6789999999999999999998655443322 34 899999999999999999999999999985 9999999999
Q ss_pred hHhccCcccccceEEEecC
Q 006354 601 STTTVLPLLFHHIRLWRNG 619 (649)
Q Consensus 601 ~~l~~~p~V~~~~~V~g~~ 619 (649)
++|.+||+|. +++|++..
T Consensus 454 ~~l~~~~~v~-~~~vv~~~ 471 (545)
T PRK07768 454 RAAARVEGVR-PGNAVAVR 471 (545)
T ss_pred HHHHhCcccc-cceEEEEE
Confidence 9999999999 98777643
No 114
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=8.2e-53 Score=465.20 Aligned_cols=430 Identities=20% Similarity=0.188 Sum_probs=333.1
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLIC 208 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 208 (649)
+.+||.||.++++++|++|.++|+++||+|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++++
T Consensus 10 ~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHhhccCCCccEEEEecCCCCCc-cCCCC-C-CCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecC
Q 006354 209 DSKQLKKLSAVSSSLKTIKNVIYFENDGSEK-DSGVS-G-GISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSG 285 (649)
Q Consensus 209 ~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSG 285 (649)
+......+.+... ....++......... ..... . ........+++++..... ......++++++++||||
T Consensus 90 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSG 162 (509)
T PRK12406 90 HADLLHGLASALP---AGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE----PYDGPPVPQPQSMIYTSG 162 (509)
T ss_pred ccchhhhhhhhhh---cccceeecccccccccccccccccccCCCCccCHHHHhcccC----ccCCCCCCCceEEEECCC
Confidence 9877665543321 111222222110000 00000 0 000112345555543221 122345789999999999
Q ss_pred CCCCcceEEechHHHHH---HHHHHHhhCCCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhcc
Q 006354 286 STGLPKGVMITHGNIVA---TAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKK 362 (649)
Q Consensus 286 STG~PKgV~~th~~l~~---~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~ 362 (649)
|||.||+|+++|.+..+ ........+ ++.++++++..+|++|..+....+.++..|+++++.+... +.
T Consensus 163 tTG~PK~v~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~ 233 (509)
T PRK12406 163 TTGHPKGVRRAAPTPEQAAAAEQMRALIY-GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFD--------PE 233 (509)
T ss_pred CCCCCceEEEechhHHHHHHHHHhhhhhc-CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCC--------HH
Confidence 99999999997765433 333344556 7888999999999999988777777889999998843221 11
Q ss_pred CccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHH
Q 006354 363 GTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAV 442 (649)
Q Consensus 363 ~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (649)
.+...++++++|.+.++|+++..+........ +..
T Consensus 234 ~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~---------------------------------------------~~~ 268 (509)
T PRK12406 234 ELLQLIERHRITHMHMVPTMFIRLLKLPEEVR---------------------------------------------AKY 268 (509)
T ss_pred HHHHHHHHcCCeEEEccHHHHHHHHhCchhhc---------------------------------------------ccC
Confidence 23333999999999999999998865211100 001
Q ss_pred hCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcccccccccccCCC-CCCCCccCCCcccceEEEEecCCCCcccC
Q 006354 443 LGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWD-DPSVGRVGPPVPCCYIKLVSWDEGGYKTS 521 (649)
Q Consensus 443 ~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~p~~~v~i~d~~~~~~~~~ 521 (649)
..+++|.+++||+++++++.+++.+.+++.+++.||+||++.+++..... ...++++|.|+++++++++| +++..
T Consensus 269 ~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~--- 344 (509)
T PRK12406 269 DVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVD-EDGRP--- 344 (509)
T ss_pred CCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEEC-CCCCC---
Confidence 12489999999999999999999998899999999999998766544322 23457899999999999999 55443
Q ss_pred CCCCCccEEEEccccccc-cccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhh
Q 006354 522 DKPMPRGEIVVGGFNVTA-GYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIP 600 (649)
Q Consensus 522 ~~~g~~GEl~v~g~~v~~-gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE 600 (649)
++.|+.|||+++|+.++. ||+++++.++..+ .+ +||+|||+|++++||++++.||.||+||+ +|++|+|.+||
T Consensus 345 ~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~---~~--~~~~TGD~~~~~~~g~~~~~GR~~d~ik~-~G~~v~~~~IE 418 (509)
T PRK12406 345 LPQGEIGEIYSRIAGNPDFTYHNKPEKRAEID---RG--GFITSGDVGYLDADGYLFLCDRKRDMVIS-GGVNIYPAEIE 418 (509)
T ss_pred CCCCCceEEEEECCccccccccCCchhccccc---CC--CCeEEccEEEEcCCceEEEeecccceEEE-CCEEECHHHHH
Confidence 678999999999998875 9999999888766 56 89999999999999999999999999997 59999999999
Q ss_pred hHhccCcccccceEEEecCCCCcccchhhh
Q 006354 601 STTTVLPLLFHHIRLWRNGPMKLASSTKIF 630 (649)
Q Consensus 601 ~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~ 630 (649)
++|.++|+|. +++|++.++...++.+.++
T Consensus 419 ~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~ 447 (509)
T PRK12406 419 AVLHAVPGVH-DCAVFGIPDAEFGEALMAV 447 (509)
T ss_pred HHHHhCCCee-EEEEEeeeccccCceeEEE
Confidence 9999999999 9999999887765544333
No 115
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.6e-53 Score=468.67 Aligned_cols=402 Identities=17% Similarity=0.139 Sum_probs=293.2
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchh------HHHHHHhhccCCCccEEEEecCC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQ------LKKLSAVSSSLKTIKNVIYFEND 235 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~l~~~~~~~~~~~~ii~~~~~ 235 (649)
++|++++++++|||+++|++++|+++.++++++.++|++++++++|+++.. .+.+..+....+ .+.++.....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 79 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAP-AKAIVLPAAG 79 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhccc-ceEEEEeccC
Confidence 589999999999999999999999999999999999999999999998642 122222222111 2223222111
Q ss_pred CCCccCCCCCCCCCceEeehHHHHhcCCC------CCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHh
Q 006354 236 GSEKDSGVSGGISNWTVSSFSEVEKLGKR------SPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKT 309 (649)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~ 309 (649)
.... . .......+++++...... ....+....++|+++|+|||||||.||||++||++++..+.....
T Consensus 80 ~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~ 153 (499)
T PLN03051 80 EPVA---V---PLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWA 153 (499)
T ss_pred cccC---C---ccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHH
Confidence 0000 0 000012345555432111 011112235689999999999999999999999998877666556
Q ss_pred hCCCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHH
Q 006354 310 LIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREG 389 (649)
Q Consensus 310 ~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~ 389 (649)
.+ .+..+|++++.+|++|++++..++.++..|+++++.+... + ...+++.|+++++|++.++|+++..|.+.
T Consensus 154 ~~-~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~--~-----~~~~~~~i~~~~vt~~~~vP~~~~~l~~~ 225 (499)
T PLN03051 154 HM-DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAP--L-----GRGFGKFVQDAGVTVLGLVPSIVKAWRHT 225 (499)
T ss_pred hc-CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCC--C-----cHHHHHHHHHhCCcEEEeCHHHHHHHHhc
Confidence 66 7888999999999999999877788899999998843210 0 11233339999999999999999988653
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc
Q 006354 390 VVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM 469 (649)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~ 469 (649)
..... .....++||.+++||++++++..+++++.+
T Consensus 226 ~~~~~---------------------------------------------~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~ 260 (499)
T PLN03051 226 GAFAM---------------------------------------------EGLDWSKLRVFASTGEASAVDDVLWLSSVR 260 (499)
T ss_pred Ccccc---------------------------------------------ccCCchhheEEEecCCCCCHHHHHHHHHhc
Confidence 10000 000113799999999999999988877633
Q ss_pred --CCccccccCccccccccccc-CCCCCCCCccCCCcccceEEEEecCCCCcccCCCCC--CccEEEEccccc--ccccc
Q 006354 470 --GAPIGQAYGLTETCAGSTFS-EWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPM--PRGEIVVGGFNV--TAGYF 542 (649)
Q Consensus 470 --~~~l~~~YG~TE~~~~~~~~-~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g--~~GEl~v~g~~v--~~gY~ 542 (649)
++++++.||+||++...+.. .......+++|+|.++++++|+| ++++. ++.| +.|||+|+|+.+ +.|||
T Consensus 261 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~g~~---~~~g~~~~Gel~v~g~~~~~~~gy~ 336 (499)
T PLN03051 261 GYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLN-DNGVP---YPDDQPCVGEVALAPPMLGASDRLL 336 (499)
T ss_pred cccceeEeeeccccccceeecccccCCCCCccccCCCCCceEEEEC-CCCCC---CCCCCCcceEEEEecCcCCCCcccc
Confidence 47899999999986543322 22223457899999999999999 55554 5566 589999999977 58999
Q ss_pred CCCccchhhhccC-----CCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhcc-CcccccceEEE
Q 006354 543 NNPGKTSEVYKVD-----ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTV-LPLLFHHIRLW 616 (649)
Q Consensus 543 ~~~~~t~~~f~~~-----~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~-~p~V~~~~~V~ 616 (649)
|++ .++ .|... ..+.+||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|.+ ||+|. +|+|+
T Consensus 337 ~~~-~~~-~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~-~G~~v~p~EIE~~l~~~~p~V~-~aavv 412 (499)
T PLN03051 337 NAD-HDK-VYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNL-GGIKTSSVEIERACDRAVAGIA-ETAAV 412 (499)
T ss_pred CCc-ccc-eeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEee-CCEECCHHHHHHHHHhcCCCcc-eEEEE
Confidence 865 343 33210 012348999999999999999999999999997 5999999999999986 99999 99999
Q ss_pred ecCCCCcc-cchhhhh
Q 006354 617 RNGPMKLA-SSTKIFQ 631 (649)
Q Consensus 617 g~~~~~~~-~~~~~~~ 631 (649)
|.+++..| +.+.+++
T Consensus 413 g~~d~~~g~~~~~a~v 428 (499)
T PLN03051 413 GVAPPDGGPELLVIFL 428 (499)
T ss_pred EecCCCCCceEEEEEE
Confidence 99998888 4555543
No 116
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.4e-52 Score=450.30 Aligned_cols=397 Identities=24% Similarity=0.279 Sum_probs=324.3
Q ss_pred eHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECc
Q 006354 132 TYGEVFDRACSFASGLVN-FGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (649)
Q Consensus 132 TY~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (649)
||+||.+.++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCc
Q 006354 211 KQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLP 290 (649)
Q Consensus 211 ~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~P 290 (649)
.....+..... .++..... +...................+++++++|||||||.|
T Consensus 81 ~~~~~~~~~~~------~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~p 135 (408)
T TIGR01733 81 ALASRLAGLVL------PIILVDPL-------------------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRP 135 (408)
T ss_pred chhhhccccCC------ceEEechh-------------------hhhhcccccccccccCCCCCCCcEEEEEcCCCCCCC
Confidence 76655433211 11111100 000000000000111114578999999999999999
Q ss_pred ceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCcccccee
Q 006354 291 KGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSV 370 (649)
Q Consensus 291 KgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~ 370 (649)
|+|.+||+++.+.+......+ .+.++|++++..|++|.+++...+.++..|+++++.+...... ...+...+++
T Consensus 136 K~v~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~-----~~~~~~~~~~ 209 (408)
T TIGR01733 136 KGVVVTHRSLVNLLAWLARRY-GLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERD-----AALLAALIAE 209 (408)
T ss_pred CEEEeccHHHHHHHHHHHHhc-CCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccC-----HHHHHHHHHH
Confidence 999999999999999988887 8889999999999999999988999999999999855433311 1223333888
Q ss_pred ecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEE
Q 006354 371 LKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFM 450 (649)
Q Consensus 371 ~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i 450 (649)
+++|.+.++|.+++.+.+... ...++||.+
T Consensus 210 ~~~t~l~~~p~~~~~l~~~~~--------------------------------------------------~~~~~l~~v 239 (408)
T TIGR01733 210 HPVTVLNLTPSLLALLAAALP--------------------------------------------------PALASLRLV 239 (408)
T ss_pred cCceEEEeCHHHHHHHHHhhh--------------------------------------------------hcccCceEE
Confidence 999999999999999876422 011489999
Q ss_pred EecCCCCCHHHHHHHHhhcC-CccccccCcccccccccccCCCCC-----CCCccCCCcccceEEEEecCCCCcccCCCC
Q 006354 451 ICGGAPLSADSQRFINICMG-APIGQAYGLTETCAGSTFSEWDDP-----SVGRVGPPVPCCYIKLVSWDEGGYKTSDKP 524 (649)
Q Consensus 451 ~~gG~~l~~~~~~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~~~~-----~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~ 524 (649)
++||+++++++.+++.+.++ +.+++.||+||++.+++....... +..++|+|+++++++|+|++ +.. ++.
T Consensus 240 ~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~-~~~---~~~ 315 (408)
T TIGR01733 240 ILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDDD-LRP---VPV 315 (408)
T ss_pred EEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECCC-CCC---CCC
Confidence 99999999999999999987 899999999999887753322211 26789999999999999954 443 678
Q ss_pred CCccEEEEccccccccccCCCccchhhhccCC----CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhh
Q 006354 525 MPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDE----RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIP 600 (649)
Q Consensus 525 g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~----~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE 600 (649)
|+.|||+|+|+.++.||+++++.|.+.|..++ ++..||+|||+|++|++|++++.||.||+|++ +|++|+|.+||
T Consensus 316 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~-~G~~v~~~~ie 394 (408)
T TIGR01733 316 GVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKI-RGYRIELGEIE 394 (408)
T ss_pred CCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEe-CeEEechHHHH
Confidence 99999999999999999999999999886321 21239999999999999999999999999997 59999999999
Q ss_pred hHhccCcccccceEE
Q 006354 601 STTTVLPLLFHHIRL 615 (649)
Q Consensus 601 ~~l~~~p~V~~~~~V 615 (649)
++|.+||.|. +|+|
T Consensus 395 ~~l~~~~~v~-~~~v 408 (408)
T TIGR01733 395 AALLRHPGVR-EAVV 408 (408)
T ss_pred HHHhcCcchh-hhcC
Confidence 9999999999 9875
No 117
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=2.6e-52 Score=452.17 Aligned_cols=384 Identities=24% Similarity=0.325 Sum_probs=317.4
Q ss_pred eHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch
Q 006354 132 TYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (649)
Q Consensus 132 TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (649)
||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++++|+++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcc
Q 006354 212 QLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPK 291 (649)
Q Consensus 212 ~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PK 291 (649)
...... ....+.++................+++++++|||||||.||
T Consensus 81 ~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK 127 (436)
T TIGR01923 81 LEEKDF---------------------------------QADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPK 127 (436)
T ss_pred ccccce---------------------------------eecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCc
Confidence 321100 00111111111111111123345688999999999999999
Q ss_pred eEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceee
Q 006354 292 GVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVL 371 (649)
Q Consensus 292 gV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~ 371 (649)
+|+++|+++...+......+ +++++|++++.+|++|..++..++.++..|+++++.++.. .++..++++
T Consensus 128 ~v~~s~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~----------~~~~~l~~~ 196 (436)
T TIGR01923 128 AVPHTFRNHYASAVGSKENL-GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKFN----------QLLEMIANE 196 (436)
T ss_pred EEEEehHHHHHHHHHHHhhc-CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchHH----------HHHHHHHHh
Confidence 99999999999999888888 8999999999999999999888888999999999865432 123339999
Q ss_pred cceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEE
Q 006354 372 KPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMI 451 (649)
Q Consensus 372 ~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~ 451 (649)
++|++.++|+++..+.+.... .+++|.++
T Consensus 197 ~~t~~~~~P~~l~~l~~~~~~---------------------------------------------------~~~l~~~~ 225 (436)
T TIGR01923 197 RVTHISLVPTQLNRLLDEGGH---------------------------------------------------NENLRKIL 225 (436)
T ss_pred CCeEEEeHHHHHHHHHhCcCC---------------------------------------------------CCceEEEE
Confidence 999999999999888653110 02799999
Q ss_pred ecCCCCCHHHHHHHHhhcCCccccccCcccccccccccCCCC-CCCCccCCCcccceEEEEecCCCCcccCCCCCCccEE
Q 006354 452 CGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDD-PSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEI 530 (649)
Q Consensus 452 ~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl 530 (649)
+||+++++++.++++. +++++++.||+||++..++...... ....++|.|++++++++.+.+. ++.|||
T Consensus 226 ~~G~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~---------~~~Gel 295 (436)
T TIGR01923 226 LGGSAIPAPLIEEAQQ-YGLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKVDNK---------EGHGEI 295 (436)
T ss_pred ECCCCCCHHHHHHHHH-hCCceeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEeCCC---------CCceEE
Confidence 9999999999988876 5999999999999987665443322 2223599999999999954121 267999
Q ss_pred EEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccc
Q 006354 531 VVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLF 610 (649)
Q Consensus 531 ~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~ 610 (649)
+|+|+.++.||+++++.+...+ .+ +||+|||+|++++||++++.||.||+||+ +|++|+|.+||++|.++|.|.
T Consensus 296 ~v~~~~~~~gy~~~~~~~~~~~---~~--~~~~TGD~~~~~~dg~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~ 369 (436)
T TIGR01923 296 MVKGANLMKGYLYQGELTPAFE---QQ--GWFNTGDIGELDGEGFLYVLGRRDDLIIS-GGENIYPEEIETVLYQHPGIQ 369 (436)
T ss_pred EEECCccchhhCCChhhhhhhh---cC--CCeeccceEEEcCCCCEEEeccccCeEEe-CCEeeCHHHHHHHHHhCCCee
Confidence 9999999999999888887765 45 89999999999999999999999999997 599999999999999999999
Q ss_pred cceEEEecCCCCcccch
Q 006354 611 HHIRLWRNGPMKLASST 627 (649)
Q Consensus 611 ~~~~V~g~~~~~~~~~~ 627 (649)
+++|++..+...+...
T Consensus 370 -~~~v~~~~~~~~~~~~ 385 (436)
T TIGR01923 370 -EAVVVPKPDAEWGQVP 385 (436)
T ss_pred -EEEEeCCcchhcCCee
Confidence 9999999877655443
No 118
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-50 Score=410.14 Aligned_cols=444 Identities=22% Similarity=0.221 Sum_probs=351.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..|++++|..+++++|+++|+++.+ ++ +.+||+|++++++++|+.|+.+|++.||.|++
T Consensus 76 ~~ti~~~F~~~vrr~p~k~aii~~~----------~~-----------~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL 134 (649)
T KOG1179|consen 76 RRTIAELFLSQVRRQPDKPAIIYEG----------PF-----------QSLTFAELDARSNRVANYLHAEGLKAGDVVAL 134 (649)
T ss_pred CCcHHHHHHHHHHhCCCccEEEEeC----------CC-----------ceeeHHHHHHHHHHHHHHHHHhhcccCCEEEE
Confidence 4699999999999999999999853 22 36999999999999999999999999999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCcc-EEEEecCCCCCc
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIK-NVIYFENDGSEK 239 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~-~ii~~~~~~~~~ 239 (649)
+++|++|++..+||++++|++...||+++..+.+.|.+..++++.+|++.+....+.++.+.+.... .+...+....
T Consensus 135 ~men~pefv~lWlGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~-- 212 (649)
T KOG1179|consen 135 LMENRPEFVALWLGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSV-- 212 (649)
T ss_pred ecCCChhHHHHHHhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCC--
Confidence 9999999999999999999999999999999999999999999999999999988887743322211 1111111111
Q ss_pred cCCCCCCCCCceEeehHHHHhcCCCCCCC---CCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCC
Q 006354 240 DSGVSGGISNWTVSSFSEVEKLGKRSPVD---PSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGR 316 (649)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~ 316 (649)
.....++.+.++.....+.+ ....+-.++++.+|||||||.||..++||.-+..........+ +++.
T Consensus 213 ---------~~g~~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~-g~~~ 282 (649)
T KOG1179|consen 213 ---------PDGIESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF-GMTA 282 (649)
T ss_pred ---------CchHHHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-CCCc
Confidence 01122333333333333322 2344567899999999999999999999999998888788888 9999
Q ss_pred CcEEEEccChHHHHHHHH-HHHHHHhCceEEe---CCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHH
Q 006354 317 SDVYLAYLPLAHVLELAA-ESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVK 392 (649)
Q Consensus 317 ~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~---~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~ 392 (649)
+|++...+|++|..+.+. +..++..|+|+++ ++..++.++ ..++++|++--.-.+.+.|.++...
T Consensus 283 ~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~D-----------C~k~~~Tv~QYIGElcRYLl~~p~~ 351 (649)
T KOG1179|consen 283 DDVVYTTLPLYHSAAGILGIGGCLLHGATVVLRKKFSASNFWDD-----------CRKYNVTVIQYIGELCRYLLNQPPS 351 (649)
T ss_pred cceEEEcchhHHHHHHHHHHHHHHhcCceEEEecccchhhhHHH-----------HHHhCCeeeehHHHHHHHHHcCCCC
Confidence 999999999999998776 7789999999999 777777776 8999999999999999888876443
Q ss_pred HHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCc
Q 006354 393 KVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAP 472 (649)
Q Consensus 393 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~ 472 (649)
+.++. .++|..+ |..+.+++++.|.++||.+
T Consensus 352 ~~er~-----------------------------------------------HkVRla~--GNGLR~diW~~Fv~RFg~~ 382 (649)
T KOG1179|consen 352 PEERQ-----------------------------------------------HKVRLAY--GNGLRPDIWQQFVKRFGII 382 (649)
T ss_pred hhhcC-----------------------------------------------ceEEEEe--cCCCCchHHHHHHHHcCCC
Confidence 33221 3677766 9999999999999999876
Q ss_pred -cccccCcccccccccccCCCCCCCCccCCCc------ccceEEEEec-------CCCCcccCCCCCCccEEE--Ecccc
Q 006354 473 -IGQAYGLTETCAGSTFSEWDDPSVGRVGPPV------PCCYIKLVSW-------DEGGYKTSDKPMPRGEIV--VGGFN 536 (649)
Q Consensus 473 -l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~------p~~~v~i~d~-------~~~~~~~~~~~g~~GEl~--v~g~~ 536 (649)
|.+.||+||........ +.+.|.+|+.. --.++.-.|+ ++.+.+.+|++|+.|.++ |.-..
T Consensus 383 ~IgE~YgaTEgn~~~~N~---d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~ 459 (649)
T KOG1179|consen 383 KIGEFYGATEGNSNLVNY---DGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKN 459 (649)
T ss_pred eEEEEeccccCcceeeee---cCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCC
Confidence 99999999975543332 34445555421 1122222333 345566779999999775 22233
Q ss_pred c---cccccCCCccchhhhccC--CCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCccccc
Q 006354 537 V---TAGYFNNPGKTSEVYKVD--ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFH 611 (649)
Q Consensus 537 v---~~gY~~~~~~t~~~f~~~--~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~ 611 (649)
- +.||.++.+.|+++...+ ..|+-||.|||+-.+|+.|++||.+|..|++.++ ||+|+..|||.+|....++.
T Consensus 460 P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWK-GENVsTtEVe~~l~~~~~~~- 537 (649)
T KOG1179|consen 460 PLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWK-GENVSTTEVEDVLSALDFLQ- 537 (649)
T ss_pred chhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeec-CCcccHHHHHHHHhhhcccc-
Confidence 3 889999888888765532 3456899999999999999999999999999997 99999999999999999999
Q ss_pred ceEEEecCCCC
Q 006354 612 HIRLWRNGPMK 622 (649)
Q Consensus 612 ~~~V~g~~~~~ 622 (649)
|+.|+|+.=+.
T Consensus 538 dv~VYGV~VP~ 548 (649)
T KOG1179|consen 538 DVNVYGVTVPG 548 (649)
T ss_pred ceeEEEEecCC
Confidence 99999987444
No 119
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-50 Score=435.41 Aligned_cols=348 Identities=17% Similarity=0.138 Sum_probs=294.7
Q ss_pred EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEEC
Q 006354 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICD 209 (649)
Q Consensus 130 ~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 209 (649)
.+||+||.++++++|+.|. +|+++|++|+|+++|+++++++++||+++|++++|+++..+.+++..+++++++++++++
T Consensus 8 ~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~ 86 (414)
T PRK08308 8 EYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYG 86 (414)
T ss_pred eecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEec
Confidence 6999999999999999985 689999999999999999999999999999999999999999999999999999999997
Q ss_pred chhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCC
Q 006354 210 SKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGL 289 (649)
Q Consensus 210 ~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~ 289 (649)
+.... . . . .....++++++|+|||||||.
T Consensus 87 ~~~~~---------------~----------------------~----------~----~~~~~~~~~~~i~~TSGtTG~ 115 (414)
T PRK08308 87 ESDFT---------------K----------------------L----------E----AVNYLAEEPSLLQYSSGTTGE 115 (414)
T ss_pred Ccccc---------------c----------------------c----------c----CCCCCCCCceEEEECCCCCCC
Confidence 63100 0 0 0 012356789999999999999
Q ss_pred cceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeC---CcccccccchhhccCcc
Q 006354 290 PKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYG---STLTMTDTSSKIKKGTK 365 (649)
Q Consensus 290 PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~---~~~~l~~~~~~~~~~~~ 365 (649)
||||++||+++.+.+......+ .+..+|+++..+|++|.+++.. ++.++..|+++++. ++..+.+.
T Consensus 116 PKgv~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~--------- 185 (414)
T PRK08308 116 PKLIRRSWTEIDREIEAYNEAL-NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNI--------- 185 (414)
T ss_pred CcEEEEehHhHHHHHHHHHHhh-CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHH---------
Confidence 9999999999999888888877 7888999999999999999865 77889999999884 33344444
Q ss_pred ccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCC
Q 006354 366 GDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGG 445 (649)
Q Consensus 366 ~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 445 (649)
++++++|+++++|.++..+.+.... ..
T Consensus 186 --l~~~~~t~~~~~P~~~~~l~~~~~~---------------------------------------------------~~ 212 (414)
T PRK08308 186 --LRNTPQHILYAVPLMLHILGRLLPG---------------------------------------------------TF 212 (414)
T ss_pred --HHHhCCeEEEcCHHHHHHHHhcCCc---------------------------------------------------cc
Confidence 8999999999999999888653110 02
Q ss_pred ceEEEEecCCCCCHHHHHHHHhhcCCccccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCCcccCCCCC
Q 006354 446 RIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPM 525 (649)
Q Consensus 446 ~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g 525 (649)
+++.+++||+++++++.+.+++. +.++++.||+||++.+.... .....+++|+|+|++++++.+ + .+
T Consensus 213 ~l~~~~~~G~~l~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~--~~~~~~~~G~p~~~~~~~~~~-~---------~~ 279 (414)
T PRK08308 213 QFHAVMTSGTPLPEAWFYKLRER-TTYMMQQYGCSEAGCVSICP--DMKSHLDLGNPLPHVSVSAGS-D---------EN 279 (414)
T ss_pred cccEEEEccCCCCHHHHHHHHHh-CChhhhccCccccCCeeecC--CCCCCCccCccCCCeEEEEec-C---------CC
Confidence 57889999999999999999886 67899999999987544322 223457899999999999875 1 24
Q ss_pred CccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhcc
Q 006354 526 PRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTV 605 (649)
Q Consensus 526 ~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~ 605 (649)
..|||++++ .+ +||+|||+|++++||+++++||.||+||+ +|++|+|.|||++|.+
T Consensus 280 ~~gel~v~~---------------------~~--~~~~TGDl~~~~~dg~l~~~GR~~~~ik~-~G~~v~p~eIE~~l~~ 335 (414)
T PRK08308 280 APEEIVVKM---------------------GD--KEIFTKDLGYKSERGTLHFMGRMDDVINV-SGLNVYPIEVEDVMLR 335 (414)
T ss_pred CCceEEEEc---------------------CC--ceEECCceEEECCCccEEEecccCCeEEE-CCEEECHHHHHHHHHh
Confidence 579999974 22 79999999999999999999999999998 4999999999999999
Q ss_pred CcccccceEEEecCCCCcccchhhh
Q 006354 606 LPLLFHHIRLWRNGPMKLASSTKIF 630 (649)
Q Consensus 606 ~p~V~~~~~V~g~~~~~~~~~~~~~ 630 (649)
+|+|. +|+|++..++..++.+.++
T Consensus 336 ~~~v~-~a~v~~~~~~~~~~~~~~~ 359 (414)
T PRK08308 336 LPGVQ-EAVVYRGKDPVAGERVKAK 359 (414)
T ss_pred CCCee-EEEEEeccCCCCCceEEEE
Confidence 99999 9999999988777555443
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.7e-48 Score=439.98 Aligned_cols=470 Identities=21% Similarity=0.244 Sum_probs=363.0
Q ss_pred CcccccccccCCCccceehheeeecceeEeeehhccccccccccCCCCCCCCCCccccccCCCCcccccCCCCCCCHHHH
Q 006354 8 SFDSELLTEKGSGIYGIVGAAIVALLIPVLLSMMVARKKKVKQRGVPVEVGGEPGYAIRNAQIPELVEVPWKGASTMAAL 87 (649)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~ 87 (649)
.|..++|....+..+...+..++.. ..+. |... +..++++...++ .. ++. ...+.+...+++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~--~~~~---~~~l~ll~~~e~-~~--~~~----~~~~~~~~~~i~~~ 232 (642)
T COG1020 169 DYARELFDAETIERELRHFLQLLAA----LADA--PRTS---LSALPLLLPSER-EV--WNA----LAAPIPLRLTIHLL 232 (642)
T ss_pred EeecccCCHHHHHHHHHHHHHHHHH----HHhC--cccC---cccCCCCCHHHH-hh--ccc----cccCCCccchHHHH
Confidence 4555555555555555544444331 1122 3333 677888877777 11 112 22333445799999
Q ss_pred HHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH
Q 006354 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE 167 (649)
Q Consensus 88 ~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~ 167 (649)
|.++++++|++.|+.. .+ ..+||+|+..+++++|+.|.+.|+.++++|+++.+++++
T Consensus 233 f~~~a~~~p~~~a~~~------------~~-----------~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~ 289 (642)
T COG1020 233 FEEQAATTPDAVALVR------------GG-----------QQLTYAELDARANRLARLLISLGVGPGETVAILADRSLE 289 (642)
T ss_pred HHHHHHhCCCceeEec------------CC-----------CcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHH
Confidence 9999999999998875 22 269999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCCC
Q 006354 168 WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGGI 247 (649)
Q Consensus 168 ~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~ 247 (649)
++++++|++++|+.++|+||.+|.+++.+++++++++.+++......... ..+. +..+
T Consensus 290 ~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~----~~~~----~~~~-------------- 347 (642)
T COG1020 290 LVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDV----GLPG----LALD-------------- 347 (642)
T ss_pred HHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccc----cCCc----cccc--------------
Confidence 99999999999999999999999999999999999999999833221100 0000 0000
Q ss_pred CCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChH
Q 006354 248 SNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLA 327 (649)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~ 327 (649)
.................+++.+|++|||||||.||||+++|+++++.+.+....+ .++.+|+++...+++
T Consensus 348 ---------~~~~~~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~-~~~~~d~~l~~~s~~ 417 (642)
T COG1020 348 ---------DALSEIPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARF-GLDADDRVLALASLS 417 (642)
T ss_pred ---------cccccCCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhc-CCCcccEEeecCCcc
Confidence 0000000000001234568999999999999999999999999999888888888 999999999999999
Q ss_pred HHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 006354 328 HVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNI 407 (649)
Q Consensus 328 h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~ 407 (649)
++.+...++.++..|+++++..+....+.. .+...+.++++|++..+|.++..+...........
T Consensus 418 fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~-----~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~---------- 482 (642)
T COG1020 418 FDASVFEIFGALLEGARLVLAPALLQVDPA-----ALLELLEAQGITVLLLVPLLLRLLLLAALAPDLIS---------- 482 (642)
T ss_pred cchhHHHHHHHHhCCCEEEecCccccCCHH-----HHHHHHHHcCCEEEEecHHHHHHHHhchhhccccC----------
Confidence 999999999999999999996665555432 22333788999999999999998876411100000
Q ss_pred HHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc--CCccccccCccccccc
Q 006354 408 GYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM--GAPIGQAYGLTETCAG 485 (649)
Q Consensus 408 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~--~~~l~~~YG~TE~~~~ 485 (649)
..+.+|.+++||+.++..+...+.... ...+.|.||+||++..
T Consensus 483 -----------------------------------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~ 527 (642)
T COG1020 483 -----------------------------------PCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLD 527 (642)
T ss_pred -----------------------------------CcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhh
Confidence 002489999999999999988776654 4689999999997776
Q ss_pred ccccCCCCCC--CCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCccccee
Q 006354 486 STFSEWDDPS--VGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFY 563 (649)
Q Consensus 486 ~~~~~~~~~~--~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~ 563 (649)
.+........ ..++|+|++|+.++|+| +... .++.|..||++|.|.++++||+++|+.|.+.|. .+ ++|+
T Consensus 528 ~~~~~~~~~~~~~~piG~p~~n~~~~ild-~~~~---~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~--~~--~~y~ 599 (642)
T COG1020 528 APSFPISAELESRVPIGRPVANTQLYILD-QGLR---PLPLGVPGELYIAGLGLALGYLNRPDLTAERFI--AL--RLYR 599 (642)
T ss_pred eeeEEcccccCCCCCcceeeCCCeEEEEC-CCCC---cCCCCCCeeeEECCcchhhhhcCChhhhHHHhh--hc--cCcc
Confidence 6554433322 46999999999999999 4433 378999999999999999999999999999997 43 4999
Q ss_pred eCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCc
Q 006354 564 TGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLP 607 (649)
Q Consensus 564 TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p 607 (649)
|||++++.+||.++++||.|+++|++ |+||+++|||..+.++|
T Consensus 600 tgD~~r~~~dg~~e~lgr~D~qvki~-g~Riel~eie~~l~~~~ 642 (642)
T COG1020 600 TGDLARPLADGALEYLGRKDSQVKIR-GFRIELGEIEAALAEQP 642 (642)
T ss_pred CCCeeeECCCCeEEEeccccceeEec-eEecCcHHHHHHHhcCC
Confidence 99999999999999999999999997 99999999999998876
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.4e-38 Score=333.50 Aligned_cols=270 Identities=23% Similarity=0.346 Sum_probs=214.4
Q ss_pred CCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCc
Q 006354 271 LPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGST 350 (649)
Q Consensus 271 ~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~ 350 (649)
.+.++|+++|+|||||||.||||+++|+++.+.+......+ ...++++..+|++|..++..++.++..|+++++.+.
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL---GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc---CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCc
Confidence 44578999999999999999999999999998887665544 345788999999999999888888999999877322
Q ss_pred ccccccchhhccCccccceeec--ceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchh
Q 006354 351 LTMTDTSSKIKKGTKGDVSVLK--PTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLER 428 (649)
Q Consensus 351 ~~l~~~~~~~~~~~~~~i~~~~--~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 428 (649)
....+. ..+...+++++ .++...+|..+..+......
T Consensus 108 ~~~~~~-----~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~------------------------------------ 146 (358)
T PRK07824 108 SAGFDP-----TALPRAVAELGGGRRYTSLVPMQLAKALDDPAA------------------------------------ 146 (358)
T ss_pred CCCcCH-----HHHHHHHHHhCCCceEEEecHHHHHHHHhCccc------------------------------------
Confidence 111111 11223377777 45666788777655432100
Q ss_pred hhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcccccccccccCCCCCCCCccCCCcccceE
Q 006354 429 MLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYI 508 (649)
Q Consensus 429 ~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v 508 (649)
....+++|.+++||+++++++.+.+.+ +++++++.||+||++..+. ..|.|++++++
T Consensus 147 ------------~~~~~~l~~i~~gG~~l~~~~~~~~~~-~~~~v~~~YG~TE~~~~~~----------~~G~~~~g~~v 203 (358)
T PRK07824 147 ------------TAALAELDAVLVGGGPAPAPVLDAAAA-AGINVVRTYGMSETSGGCV----------YDGVPLDGVRV 203 (358)
T ss_pred ------------cCCcccceEEEECCCCCCHHHHHHHHh-cCCcEEecccCCccCCCcC----------cCceeCCCCEE
Confidence 001138999999999999999988876 4899999999999875432 35899999999
Q ss_pred EEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEEc
Q 006354 509 KLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKL 588 (649)
Q Consensus 509 ~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki 588 (649)
++.+ |||+++|+.++.||+++++.+ .|. .+ |||+|||+|++ +||.++++||.||+||+
T Consensus 204 ~i~~---------------Gei~v~g~~~~~gY~~~~~~~--~~~--~~--g~~~TGDl~~~-~~g~l~i~GR~~d~i~~ 261 (358)
T PRK07824 204 RVED---------------GRIALGGPTLAKGYRNPVDPD--PFA--EP--GWFRTDDLGAL-DDGVLTVLGRADDAIST 261 (358)
T ss_pred EecC---------------CEEEEecCccccccCCCcccc--ccc--CC--CceecccEEEE-eCCEEEEEeccCCeEEE
Confidence 9843 899999999999999988754 343 44 79999999999 89999999999999998
Q ss_pred CCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhh
Q 006354 589 QHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQ 631 (649)
Q Consensus 589 ~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~ 631 (649)
+|++|+|.+||++|.+||+|. +|+|++.++...|+.+.++.
T Consensus 262 -~G~~v~p~eIE~~l~~~~~V~-~~~vv~~~~~~~g~~~~a~v 302 (358)
T PRK07824 262 -GGLTVLPQVVEAALATHPAVA-DCAVFGLPDDRLGQRVVAAV 302 (358)
T ss_pred -CCEEECHHHHHHHHHhCCCcc-eEEEEecCCCCCceEEEEEE
Confidence 599999999999999999999 99999999888776555543
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.98 E-value=1.6e-31 Score=280.71 Aligned_cols=230 Identities=18% Similarity=0.154 Sum_probs=177.4
Q ss_pred CCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCC--CCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCc-
Q 006354 275 NGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPG--RSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGST- 350 (649)
Q Consensus 275 ~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~--~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~- 350 (649)
+..++++|||||||.||||++||+++.+.+..+...+ ++. +.|++++.+|++|.+++.. ++.++..|+++++...
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL-GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh-CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCC
Confidence 4468999999999999999999999999888877776 553 3468999999999988755 6778999999988433
Q ss_pred --ccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchh
Q 006354 351 --LTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLER 428 (649)
Q Consensus 351 --~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 428 (649)
..+.+. ++. .|+++++|++++.+.+.. .
T Consensus 174 ~~~~~l~~-----------i~~--~t~~~~~P~~l~~l~~~~----~--------------------------------- 203 (386)
T TIGR02372 174 PASGIMRH-----------ARP--GDLIVGTPFIWEQLADLD----Y--------------------------------- 203 (386)
T ss_pred ChHHHHHh-----------hcc--CCEEEECcHHHHHHHhhC----c---------------------------------
Confidence 223222 433 289999999999886520 0
Q ss_pred hhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCC-ccccccCcccccccccccCCCCCCCCccCCCcccce
Q 006354 429 MLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGA-PIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCY 507 (649)
Q Consensus 429 ~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~-~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~ 507 (649)
..+++|. ++||+++++++.+.+++. +. .+++.||+||+++++.... +...|+|+|+++
T Consensus 204 --------------~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~-----~~~~~~~~p~~~ 262 (386)
T TIGR02372 204 --------------RLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREA-----PDDPFRLLPDLA 262 (386)
T ss_pred --------------CCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccccccC-----CCCCcccCCCcc
Confidence 0135675 678999999999998875 54 6999999999987654321 234577777766
Q ss_pred EEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccCCeEEEEecCCCeEE
Q 006354 508 IKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVK 587 (649)
Q Consensus 508 v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~ik 587 (649)
+++ + ++. + . | +. .|++|||+|+||++|+++|+||+||+||
T Consensus 263 ~~~-~--~~~-----------~---~------g---------------~~--~~~~tgD~g~~d~~G~l~i~GR~dd~Ik 302 (386)
T TIGR02372 263 CFA-D--TLS-----------S---A------G---------------LA--RRLDLQDRLAWDKDGGFTILGRKDEILQ 302 (386)
T ss_pred ccC-C--Ccc-----------C---C------C---------------cc--ceeecCceEEEcCCCcEEEecccCCEEE
Confidence 543 1 110 0 0 1 11 4889999999999999999999999999
Q ss_pred cCCceeeeCChhhhHhccCcccccceEEEec
Q 006354 588 LQHGEYISLGKIPSTTTVLPLLFHHIRLWRN 618 (649)
Q Consensus 588 i~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~ 618 (649)
+ +|++|+|.+||++|.+||+|. +|+|+..
T Consensus 303 ~-~G~~V~p~eIE~~l~~~p~V~-~~~v~~~ 331 (386)
T TIGR02372 303 V-GGVNVSPGHVRDILERNPRVR-AAAVRLD 331 (386)
T ss_pred E-CCEEEcHHHHHHHHHcCCCce-EEEEEcC
Confidence 7 599999999999999999999 9988754
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.97 E-value=3.8e-31 Score=284.56 Aligned_cols=267 Identities=17% Similarity=0.175 Sum_probs=196.2
Q ss_pred CCCCeEEEEeecCCCCCcceEEechHHHHHHHHHH---HhhCCCCCCCcEEEEccChHHHHH-HHHHHHHHHhCceEEeC
Q 006354 273 SQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAI---KTLIPNPGRSDVYLAYLPLAHVLE-LAAESIMLCAGCAIGYG 348 (649)
Q Consensus 273 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~~-~~~~~~~l~~G~~l~~~ 348 (649)
..+++++++|||||||.||+|.+||+++....... ...+ ++.++|++++..++.+..+ +...+.++..|++++..
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~-g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAA-GGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHc-CCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 45688999999999999999999999987654433 2334 7888999988766554333 22345577889988764
Q ss_pred CcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchh
Q 006354 349 STLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLER 428 (649)
Q Consensus 349 ~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 428 (649)
+.... ..++..|++++||+++++|+++..|++.........
T Consensus 152 ~~~~~--------~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~------------------------------- 192 (422)
T TIGR02155 152 SGGQT--------EKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDP------------------------------- 192 (422)
T ss_pred CCCCH--------HHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCc-------------------------------
Confidence 33221 112334999999999999999999876432210000
Q ss_pred hhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCccccccc-ccccCCCCCCCCccCCCc--cc
Q 006354 429 MLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAG-STFSEWDDPSVGRVGPPV--PC 505 (649)
Q Consensus 429 ~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~-~~~~~~~~~~~~~vG~p~--p~ 505 (649)
...++|.+++||+++++++.+.+++.+|+++++.||+||+++. .... .... ..|.++ ++
T Consensus 193 --------------~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~~~~~~~~~-~~~~---~~g~~~~~~~ 254 (422)
T TIGR02155 193 --------------AQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEVIGPGVAME-CVET---QDGLHIWEDH 254 (422)
T ss_pred --------------ccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhhcCCceeec-cccc---CCCceEecCe
Confidence 0037999999999999999999999999999999999998532 2211 1011 123333 35
Q ss_pred ceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccC-C-----eEEEE
Q 006354 506 CYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPD-G-----CLEII 579 (649)
Q Consensus 506 ~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~d-G-----~l~i~ 579 (649)
..++|+|++++.. +++|+.|||++++. +++.| +. +||+|||+++++++ | .+++.
T Consensus 255 ~~~eivd~~~g~~---v~~Ge~Gelvvt~~------------~~~~~---p~--~ry~TGDl~~~~~~~Gr~~~~~~~i~ 314 (422)
T TIGR02155 255 FYPEIIDPHTGEV---LPDGEEGELVFTTL------------TKEAL---PV--IRYRTRDLTRLLPGTARTMRRMDRIT 314 (422)
T ss_pred eEEEEECCCCCCC---CCCCCeeEEEEecC------------Ccccc---ce--eeEEcCcEEEEECCCCCccccccccc
Confidence 6778999666654 68899999999873 34455 55 79999999999876 4 47899
Q ss_pred ecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecC
Q 006354 580 DRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNG 619 (649)
Q Consensus 580 GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~ 619 (649)
||.||+||++ |++|+|.+||++|.+||+|. ..+.+...
T Consensus 315 GR~~d~i~~~-G~~v~p~eie~~l~~~~~v~-~~~q~~~~ 352 (422)
T TIGR02155 315 GRSDDMLIIR-GVNVFPTQLEEVILKMDELS-PHYQLELT 352 (422)
T ss_pred CccCCeEEEC-CEEECHHHHHHHHHhCcCcC-CCEEEEEE
Confidence 9999999985 99999999999999999997 55555443
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.97 E-value=1.4e-28 Score=265.31 Aligned_cols=454 Identities=15% Similarity=0.139 Sum_probs=314.4
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHC-CCCCCCEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNF-GHNVDTRAAI 160 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~-Gv~~gd~V~i 160 (649)
.++.++++++++++||.+|+... +++ ......+||++|..+|.+++.+|+.. -+++||.|++
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~-----------n~~------~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~L 832 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTL-----------NAR------GATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVL 832 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEe-----------ccC------CcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEE
Confidence 58999999999999999999875 444 23446799999999999999999987 5899999999
Q ss_pred EccCCHHHHHHHHHHHhcCCEEEEecCCCC------HHHHHHHHhhcCceEEEECchhHHHHHHhh--cc--CCCccEEE
Q 006354 161 LAETCVEWFIAFQGCFRQSITVVTIYSSLG------EDALIHSLNETQVTTLICDSKQLKKLSAVS--SS--LKTIKNVI 230 (649)
Q Consensus 161 ~~~~~~~~vva~lA~~~~G~~~vpl~~~~~------~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~--~~--~~~~~~ii 230 (649)
+++++.|++++++||+.+|.+++|+.|... -..+..+++.+++..|+++.+....+..-- .. ...+..++
T Consensus 833 my~~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~ 912 (1363)
T KOG3628|consen 833 MYPPSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLIL 912 (1363)
T ss_pred EcCChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhh
Confidence 999999999999999999999999987754 357889999999999999998776654321 10 11122222
Q ss_pred EecCCCCCccCCCCCCCCCceEeehHHHHhcCC--CCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHH
Q 006354 231 YFENDGSEKDSGVSGGISNWTVSSFSEVEKLGK--RSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIK 308 (649)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~ 308 (649)
.+++... ++....+... ....++-..+++.+||+-|.--++|.--||.++|.++++.++...
T Consensus 913 ~~~~~~~----------------t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iK 976 (1363)
T KOG3628|consen 913 VLPKLPE----------------TIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIK 976 (1363)
T ss_pred cccccch----------------hhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHH
Confidence 2221110 0111111111 112223445678899999999999999999999999999999999
Q ss_pred hhCCCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHH
Q 006354 309 TLIPNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVR 387 (649)
Q Consensus 309 ~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~ 387 (649)
..+ .+.++.-++.+++++...|+.. ++...+.|.+.++.+|..+... +..++..++++++.-++.+-..+....
T Consensus 977 e~~-~l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nn----psLll~~i~~~kvkDt~~~~~tln~c~ 1051 (1363)
T KOG3628|consen 977 ETC-QLYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENN----PSLLLQIISQYKVKDTYPTYSTLNLCQ 1051 (1363)
T ss_pred HHH-ccccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcC----HHHHHHHHhcccccccchhHHHHHHHH
Confidence 998 7777666777777776677654 7788999999999888888776 555666699999999999998888887
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHh
Q 006354 388 EGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINI 467 (649)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~ 467 (649)
+++..+.+..... ....++ ..++..-+.....+.+-+.+
T Consensus 1052 ~~l~t~~enl~~~----------------------------------------gnn~s~-s~vv~~~~RPr~ali~sf~k 1090 (1363)
T KOG3628|consen 1052 KGLETSVENLSKR----------------------------------------GNNTSS-SIVVPAEERPRIALIASFKK 1090 (1363)
T ss_pred hccccccchhhhh----------------------------------------hccccc-ceeeecCCccHHHHHHHHHH
Confidence 7655433321110 000011 11122222222222222222
Q ss_pred hc---CC---cc-------------ccccCcccccccc-cccCCCCC-------------CCCccCCCcccceEEEEecC
Q 006354 468 CM---GA---PI-------------GQAYGLTETCAGS-TFSEWDDP-------------SVGRVGPPVPCCYIKLVSWD 514 (649)
Q Consensus 468 ~~---~~---~l-------------~~~YG~TE~~~~~-~~~~~~~~-------------~~~~vG~p~p~~~v~i~d~~ 514 (649)
.+ |. .+ .++|...|-+... -....... .....|...+++++.|++||
T Consensus 1091 lfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPE 1170 (1363)
T KOG3628|consen 1091 LFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPE 1170 (1363)
T ss_pred HHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeCCc
Confidence 21 10 01 1233222211110 00000000 01234888899999999988
Q ss_pred CCCcccCCCCCCccEEEEccccccccccCCCc-cchhhhcc-----CCCcccceeeCcEEEEc------cCC----eEEE
Q 006354 515 EGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPG-KTSEVYKV-----DERGMCWFYTGDIGQVY------PDG----CLEI 578 (649)
Q Consensus 515 ~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~-~t~~~f~~-----~~~~~~w~~TGDlg~~~------~dG----~l~i 578 (649)
+.+. |..|+.||||+.|.+-+.+|++..+ .....|.. .-++.+|.||||+|++. ..| -||+
T Consensus 1171 tk~p---c~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyV 1247 (1363)
T KOG3628|consen 1171 TKGP---CRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYV 1247 (1363)
T ss_pred cccc---cccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEE
Confidence 8765 8899999999999999999886422 11222221 12256899999999983 222 3899
Q ss_pred EecCCCeEEcCCceeeeCChhhhHh-ccCcccccceEEEecC
Q 006354 579 IDRKKDIVKLQHGEYISLGKIPSTT-TVLPLLFHHIRLWRNG 619 (649)
Q Consensus 579 ~GR~dd~iki~~G~~v~~~eIE~~l-~~~p~V~~~~~V~g~~ 619 (649)
+|-.++.+.++ |.+.+|.+||..+ ..||.|. .|+||.-.
T Consensus 1248 lG~i~EtlEl~-GL~h~p~DIE~TV~~vH~~I~-~cavF~~~ 1287 (1363)
T KOG3628|consen 1248 LGAIDETLELN-GLRHFPSDIETTVERVHPSIG-GCAVFQAT 1287 (1363)
T ss_pred eecccceeeec-CcccCcchHHHHHHHhccccc-ceeeEeeC
Confidence 99999999996 9999999999988 5799999 99999755
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=3.2e-26 Score=255.85 Aligned_cols=466 Identities=17% Similarity=0.121 Sum_probs=285.8
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~ 161 (649)
-++++.|.+.+...|.+.+..+-... . ..+....+||++....++.+++.|...|...|+.|+++
T Consensus 36 g~~~~~~~~~~~~~~~~~~~~~~p~~--------~-------~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~ 100 (1032)
T KOG1178|consen 36 GTLEDSFRRELAEAPENTGHVIIPTA--------S-------ESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIY 100 (1032)
T ss_pred cchhhHHHHHHhhcccCCCceEeecc--------c-------ccccccchhhhhhhcccchhHHHhhhcccccCceEEEe
Confidence 47888999999999999998875322 1 12334568999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhcCCEEEEecCCCC----HH---HHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecC
Q 006354 162 AETCVEWFIAFQGCFRQSITVVTIYSSLG----ED---ALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFEN 234 (649)
Q Consensus 162 ~~~~~~~vva~lA~~~~G~~~vpl~~~~~----~~---~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~ 234 (649)
+..+.++++..++++++|.++++++|.++ ++ ++++.+......++ .... -+........
T Consensus 101 ~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~--~~l~--i~~~~~~~~~---------- 166 (1032)
T KOG1178|consen 101 MLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIV--RRLN--IIDILLNSLF---------- 166 (1032)
T ss_pred ccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhheeccceeh--hhhh--hHHHHhhccc----------
Confidence 99999999999999999999999999999 33 22222211111111 1000 0000000000
Q ss_pred CCCCccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCC
Q 006354 235 DGSEKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNP 314 (649)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~ 314 (649)
++..-.....++..+..... .......-++..|++.||||+||.||+|.-+|..+.+...|+...+ .+
T Consensus 167 ---------~~~sv~~~~~~f~~~~~~~~--~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f-~~ 234 (1032)
T KOG1178|consen 167 ---------PKLSVETIADSFQMVLHNED--TREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTF-PP 234 (1032)
T ss_pred ---------cccchhhccchhhhhhccCC--CcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccC-Cc
Confidence 00000000011111111111 1112344567799999999999999999999999999999999998 77
Q ss_pred CCCcEEEEccCh-HHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHH
Q 006354 315 GRSDVYLAYLPL-AHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKK 393 (649)
Q Consensus 315 ~~~d~~l~~~pl-~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~ 393 (649)
+.++.+-..... +++.-...+.+.|+.|+.+.++.+..--. +..+...+++++++..+.+|++.++++......
T Consensus 235 t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~-----~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~ 309 (1032)
T KOG1178|consen 235 TGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVPTATIKDT-----PGQLASTLERYGITVSHLLPAMCQLLLAILTTS 309 (1032)
T ss_pred CccchhhhhheeecccchHHHHhhHhhcCceeecccccCccc-----hhhHHHHHHhhhheeeeechhhhhhhhhhcCcc
Confidence 777765223333 23333334556677787776633221110 111222389999999999999999887754321
Q ss_pred HHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhc-CCc
Q 006354 394 VEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICM-GAP 472 (649)
Q Consensus 394 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~ 472 (649)
..... +...+. |.+ . --+.|+...++|++....+...+...+ -.-
T Consensus 310 ~~~l~-------------~~~~~~--------------dl~------~-~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~ 355 (1032)
T KOG1178|consen 310 LPLLE-------------HAFSLS--------------DLL------T-KRSCLKLVVLGGEPLLVSLYTSTFDLLAEIF 355 (1032)
T ss_pred hhhhh-------------hhhhcc--------------ccc------c-cchhheeeeecCCccchhhhhhhhhccccee
Confidence 00000 000000 000 0 003799999999999999876333333 222
Q ss_pred cccccCcccccccccccCCCCCCCCccCCCcccceEEEEecCCCC-----cc-cCCCCCCccEEEEcccccccccc----
Q 006354 473 IGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSWDEGG-----YK-TSDKPMPRGEIVVGGFNVTAGYF---- 542 (649)
Q Consensus 473 l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~~~-----~~-~~~~~g~~GEl~v~g~~v~~gY~---- 542 (649)
...-|++++.....+....... +.-+-+..+++++.-... .. .....+..||.++.+.+++.++.
T Consensus 356 ~~~~y~s~~~~~~~s~~~~~~s-----~~ll~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~ 430 (1032)
T KOG1178|consen 356 FGLPYLSTDPTGLVSYDDFSPS-----KVLLTNENVYSVPKFDSIIGSLTVLESLYRAGGEGEGGVGKGCLGAEQNLSSW 430 (1032)
T ss_pred eeecccCCCCccceeHHhhCcc-----cceecceeEEeccchhhccCCCcceeeeeccCcccCCcccceeecccccccce
Confidence 2234899988777665543322 111122222222210000 00 00001122233332222222221
Q ss_pred -CCCccchhhhccC-----CCcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEE
Q 006354 543 -NNPGKTSEVYKVD-----ERGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLW 616 (649)
Q Consensus 543 -~~~~~t~~~f~~~-----~~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~ 616 (649)
.+.-.+.+.|.++ ...++.|||||+|+..++|.+.+.||.|++||++ |.|+.++||++++..||.|. ++.++
T Consensus 431 ~~~g~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~r-G~Ri~L~ei~t~v~~~p~v~-~~itl 508 (1032)
T KOG1178|consen 431 VVDGYSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDR-GVRIELGELNTVVEVHPDVK-EAITL 508 (1032)
T ss_pred eeccccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEc-cEEEehhhhchhhccCcchh-hhhee
Confidence 1111233333221 1124789999999999999999999999999996 99999999999999999999 99999
Q ss_pred ecCCCCcccchhhhhhhh
Q 006354 617 RNGPMKLASSTKIFQSCV 634 (649)
Q Consensus 617 g~~~~~~~~~~~~~~~~~ 634 (649)
...+...++.+.+|....
T Consensus 509 ~~~~~~~~~~l~aFvv~~ 526 (1032)
T KOG1178|consen 509 ARENSTVGQTLLAFVVER 526 (1032)
T ss_pred eeeccccCceEEEEEecc
Confidence 999888787777665543
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.93 E-value=2.3e-25 Score=240.07 Aligned_cols=258 Identities=15% Similarity=0.101 Sum_probs=184.9
Q ss_pred CCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC--CCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCC
Q 006354 273 SQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI--PNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGS 349 (649)
Q Consensus 273 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~ 349 (649)
+.++++.+.|||||||.||+|.+||.++..........+ .++.++|+++...|+.+..+... .+.++..|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 457889999999999999999999999877665443321 27888999999988887766544 345677888776532
Q ss_pred c-ccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchh
Q 006354 350 T-LTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLER 428 (649)
Q Consensus 350 ~-~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 428 (649)
. ....+. ++++++|.+.++|+.+..+.+........
T Consensus 164 ~~~~~~~~-----------i~~~~~t~l~~~ps~ll~La~~~~~~g~~-------------------------------- 200 (445)
T TIGR03335 164 KCTFPIRI-----------IESYRPTGIVASVFKLLRLARRMKAEGID-------------------------------- 200 (445)
T ss_pred chhHHHHH-----------HHHhCCCEEEECHHHHHHHHHHHHHcCCC--------------------------------
Confidence 2 222333 88999999999999888776543221000
Q ss_pred hhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcccccccccccCCCCCCCCccCCCc--ccc
Q 006354 429 MLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPV--PCC 506 (649)
Q Consensus 429 ~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~--p~~ 506 (649)
....++|.+++||+++++++.+.+.+.+|+++++.||+||++... .+.. ..|..+ +.+
T Consensus 201 -------------~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~~~~~-~c~~------~~g~h~~~d~~ 260 (445)
T TIGR03335 201 -------------PAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEGTMCG-ECQA------VAGLHVPEDLV 260 (445)
T ss_pred -------------cccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhhhheE-EecC------CCCccccCCce
Confidence 000379999999999999999999998999999999999985322 2211 123333 457
Q ss_pred eEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEcc-C----C----eEE
Q 006354 507 YIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYP-D----G----CLE 577 (649)
Q Consensus 507 ~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~-d----G----~l~ 577 (649)
.+.|+|++++.. +++|+.|||++++-.-. .+.+.+ += --|+|||++++.. + | .+.
T Consensus 261 ~vEIvDp~~~~~---vp~Ge~GELvvT~L~~~--------~~r~~~---Pl--iRYrtgD~~~~~~~~~C~CGr~~~r~~ 324 (445)
T TIGR03335 261 HLDVYDPRHQRF---LPDGECGRIVLTTLLKP--------GERCGS---LL--INYDTEDTTVVISRDRCPCGRTHMRIL 324 (445)
T ss_pred EEEEEcCCCCCC---CcCCCceEEEEEecCCC--------CccCCc---eE--EEeecCceEEEecCCCCCCCCCcceeC
Confidence 899999655433 68999999999863211 011112 21 3699999999732 2 2 155
Q ss_pred EEecCCCeEEcCCceeeeCChhhhHhccC---cccc
Q 006354 578 IIDRKKDIVKLQHGEYISLGKIPSTTTVL---PLLF 610 (649)
Q Consensus 578 i~GR~dd~iki~~G~~v~~~eIE~~l~~~---p~V~ 610 (649)
..||.||+++++ |.+|+|.+||++|.++ +++.
T Consensus 325 ~~gR~dd~~~~~-g~~~~p~~ie~~l~~~~~~~~~~ 359 (445)
T TIGR03335 325 NPEREAETIWIS-GVPFNRVDVERAVFQRENMDSLT 359 (445)
T ss_pred CCcccCceEEEC-CEEeCHHHHHHHHhccCCCCCCC
Confidence 679999999996 9999999999999994 5553
No 127
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.93 E-value=1.9e-24 Score=210.49 Aligned_cols=221 Identities=13% Similarity=0.082 Sum_probs=160.7
Q ss_pred HHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEccCCH
Q 006354 88 FEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAILAETCV 166 (649)
Q Consensus 88 ~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~~~~~ 166 (649)
++.+++++|+++|+++.+ |+. ++.+.+||+||.++++++|+.|++ +|+++||+|+|+++|++
T Consensus 2 ~~~~~~~~p~~~al~~~~----------~~~-------~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~ 64 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYD----------DAT-------GERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHW 64 (227)
T ss_pred hhhhhhhCCCCcEEEEEc----------CCC-------CeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH
Confidence 567889999999998631 110 112469999999999999999998 79999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCCCccCCCCCC
Q 006354 167 EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGSEKDSGVSGG 246 (649)
Q Consensus 167 ~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~ 246 (649)
+++++++||+++|++++|++ ++++++++++++..+.+. .+ +.++.+.......... ...
T Consensus 65 ~~~~~~~a~~~~G~v~vp~n-------------~s~a~~~v~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~-~~~ 123 (227)
T TIGR03089 65 QTAVWLLAAWSTGVEVVLAG-------------DPDADVVVTGPDRLAAAA-----GS--GEVVALSLDPLGRRVA-GEL 123 (227)
T ss_pred HHHHHHHHHHHcCCEEEeCC-------------CCCCCEEEeCcchhhhcc-----cC--CceEEEeccccccCCC-CCC
Confidence 99999999999999999995 789999999988776643 11 2333332110000000 000
Q ss_pred CCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhCCCCCCCcEEEEccCh
Q 006354 247 ISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLIPNPGRSDVYLAYLPL 326 (649)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~d~~l~~~pl 326 (649)
+. ...++.+..........+.....++|+|.|+||||+ +|++++... ... +++++|+++ .+|+
T Consensus 124 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~-~l~~~D~~l-~~Pl 186 (227)
T TIGR03089 124 PP--GVIDFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAA-GLPPGDRVL-VLAW 186 (227)
T ss_pred CC--cccchhhhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhc-CCCCCCeEE-ecCC
Confidence 11 123555544432222221214567999999999985 677766654 444 789999999 9999
Q ss_pred HHHHHHHH-HHHHHHhCceEEe---CCcccccccchhhccCccccceeecce
Q 006354 327 AHVLELAA-ESIMLCAGCAIGY---GSTLTMTDTSSKIKKGTKGDVSVLKPT 374 (649)
Q Consensus 327 ~h~~~~~~-~~~~l~~G~~l~~---~~~~~l~~~~~~~~~~~~~~i~~~~~t 374 (649)
+|..|+.. ++.+|..|+++++ +++..+++. |+++|||
T Consensus 187 ~H~~gl~~~~~~~l~~G~t~v~~~rFd~~~~l~~-----------i~~~~vT 227 (227)
T TIGR03089 187 TDLEDFLATLLAPLAAGGSLVLVTHPDPARLDQI-----------AETERVT 227 (227)
T ss_pred CchHHHHHHHHHHhccCceEEEecCCCHHHHHHH-----------HHhhcCC
Confidence 99999875 7789999999998 777777666 8888886
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.86 E-value=1e-20 Score=193.76 Aligned_cols=262 Identities=19% Similarity=0.151 Sum_probs=189.2
Q ss_pred CCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC--CCCCCCcEEEEccChHH-HHHHHHHHHHHHhCceEEe
Q 006354 271 LPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI--PNPGRSDVYLAYLPLAH-VLELAAESIMLCAGCAIGY 347 (649)
Q Consensus 271 ~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~~d~~l~~~pl~h-~~~~~~~~~~l~~G~~l~~ 347 (649)
....++...|--||||||.|+-+.+|+..+......+...+ .+...+|++..+.-+.. ..++..-+++--.|+++.-
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 34456667788899999999999999998877766655543 37778887766544221 1122222334446666655
Q ss_pred CCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccch
Q 006354 348 GSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLE 427 (649)
Q Consensus 348 ~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 427 (649)
.++... ......++.+++|++.++|+.+..+++.+.+.....
T Consensus 166 ~~~g~~--------~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~------------------------------ 207 (438)
T COG1541 166 ISGGNT--------ERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDP------------------------------ 207 (438)
T ss_pred cCCccH--------HHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCCh------------------------------
Confidence 443211 112333899999999999999999998766531000
Q ss_pred hhhHHHHHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcccccccc-cccCCCCCCCCccCCCcccc
Q 006354 428 RMLWDAIVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGS-TFSEWDDPSVGRVGPPVPCC 506 (649)
Q Consensus 428 ~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~-~~~~~~~~~~~~vG~p~p~~ 506 (649)
.-.+||.+++|+|+++++..+.+.+.+|+..++.||+||..+.. .-+.... ..++ .-.+.
T Consensus 208 ---------------~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g~g~~eC~~~~--glhi--~eD~~ 268 (438)
T COG1541 208 ---------------DKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFGPGAGECTERN--GLHI--WEDHF 268 (438)
T ss_pred ---------------hhcceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccCCccccccccc--CCCc--chhhc
Confidence 00389999999999999999999999999999999999987664 2121111 1111 12567
Q ss_pred eEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccC----Ce-----EE
Q 006354 507 YIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPD----GC-----LE 577 (649)
Q Consensus 507 ~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~d----G~-----l~ 577 (649)
-+.|+||+++.+ ++.|+.|||+++.- +++.+ +- --|+|||+..+.++ |. ..
T Consensus 269 ~~Ei~dP~t~e~---l~dge~GelV~T~L------------~~~~~---Pl--IRYrtgDit~i~~~~C~cGr~~~ri~~ 328 (438)
T COG1541 269 IFEIVDPETGEQ---LPDGERGELVITTL------------TKEGM---PL--IRYRTGDITVILSDPCGCGRTHRRIER 328 (438)
T ss_pred eeeeecCCcCcc---CCCCCeeEEEEEec------------cccCc---ce--EEEEcCCeeEecccCCCCCCccccccc
Confidence 788999888877 67999999998752 22322 33 47999999999763 22 57
Q ss_pred EEecCCCeEEcCCceeeeCChhhhHhccCcccc
Q 006354 578 IIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLF 610 (649)
Q Consensus 578 i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~ 610 (649)
+.||.||+++++ |.+|+|..||.+|.+.+.+.
T Consensus 329 I~GR~dD~l~~~-G~~vfp~~ie~~l~~~~~~~ 360 (438)
T COG1541 329 IEGRSDDMLIVR-GVNVFPSQIERVLLQIPEVT 360 (438)
T ss_pred cCcccccEEEEC-CEEeCHHHHHHHHhcccCCC
Confidence 999999999997 99999999999999999887
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.79 E-value=1.6e-18 Score=188.31 Aligned_cols=451 Identities=16% Similarity=0.143 Sum_probs=296.7
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHH-HHHHCCCCCCCEEE
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFAS-GLVNFGHNVDTRAA 159 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~-~L~~~Gv~~gd~V~ 159 (649)
...+..+++.+-.+++...|.++- |.+ |....+||..+..++.++|+ .|.+-|+.++|+|.
T Consensus 93 ~~d~~avl~~~~nhs~~~ta~i~i-----------d~k-------gk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vv 154 (1363)
T KOG3628|consen 93 LTDIIAVLRYRRNHSATSTAHICI-----------DKK-------GKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVV 154 (1363)
T ss_pred hcchHHHHHhhccCCCCCceEEEE-----------cCC-------CceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEE
Confidence 456677778777888999998885 333 44578999999999999999 67778999999999
Q ss_pred EEccCC--HHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCCccEEEEecCCCC
Q 006354 160 ILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKTIKNVIYFENDGS 237 (649)
Q Consensus 160 i~~~~~--~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~~~~ii~~~~~~~ 237 (649)
++...+ .++++..++|..+|.+.+|+.+..+.+++..+++....+++++..................+.+-
T Consensus 155 L~Y~~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~------- 227 (1363)
T KOG3628|consen 155 LYYRKCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVA------- 227 (1363)
T ss_pred EEEEhhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHH-------
Confidence 999877 69999999999999999999999999999999999999999998877665544321100000000
Q ss_pred CccCCCCCCCCCceEeehHHHHhcCCCCCCCCCCCCCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC------
Q 006354 238 EKDSGVSGGISNWTVSSFSEVEKLGKRSPVDPSLPSQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI------ 311 (649)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~------ 311 (649)
.|...++.-.. ..+ ....+..... ..||-||++++|.--||+.+|+ ++.+.+.+....
T Consensus 228 -----------~w~t~~~k~~~--~~~-k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~ 291 (1363)
T KOG3628|consen 228 -----------WWKTNDFKGNY--TKD-KIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPAR 291 (1363)
T ss_pred -----------hhhccccccee--ehh-hccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHH
Confidence 00000010000 000 0011112222 7999999999999999999998 555444332211
Q ss_pred -------------CCCCCCcEEEEccChHHHHHHHH-HHHHHHhCceEEeCCcccccccchhhccCccccceeecceEEE
Q 006354 312 -------------PNPGRSDVYLAYLPLAHVLELAA-ESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMA 377 (649)
Q Consensus 312 -------------~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~ 377 (649)
.+....+.++....+....|++. .+.++++|.|....+.. ++.. +-.+...+.++|.+++.
T Consensus 292 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~-~l~~----pG~~~~l~~k~R~~~~l 366 (1363)
T KOG3628|consen 292 FAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKE-VLKP----PGLIANLITKYRATWSL 366 (1363)
T ss_pred HHHhhhcchhhhccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchh-hcCC----CcchhhhhccceeEEEe
Confidence 13455677777777777677665 77889999988763322 2222 22344448899999988
Q ss_pred echHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHHHHhCCceEEEEecCCCC
Q 006354 378 AVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDAIVFKSVRAVLGGRIRFMICGGAPL 457 (649)
Q Consensus 378 ~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG~~l 457 (649)
.-...+.+......+..+ ..+.|.+-+..+.+++|.+.+....+
T Consensus 367 td~~~Lkq~~~ny~~~p~------------------------------------a~~s~~k~~t~d~sslk~C~Vtc~~v 410 (1363)
T KOG3628|consen 367 TDYAGLKQPVYNYQEDPK------------------------------------ATLSFKKYKTPDLSSLKGCMVTCTAV 410 (1363)
T ss_pred ecccccCcccccccCCcc------------------------------------cccchhhccCCCccceeeeEEeeeec
Confidence 765555444332221110 01223555666778999999999999
Q ss_pred CHHHHHHHHhhc----CCc-cccccCc-----------------ccccccccccCCCCC---------------------
Q 006354 458 SADSQRFINICM----GAP-IGQAYGL-----------------TETCAGSTFSEWDDP--------------------- 494 (649)
Q Consensus 458 ~~~~~~~~~~~~----~~~-l~~~YG~-----------------TE~~~~~~~~~~~~~--------------------- 494 (649)
..+.+.....++ |.. ....|-+ +|.+...-..+....
T Consensus 411 d~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v 490 (1363)
T KOG3628|consen 411 DTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEV 490 (1363)
T ss_pred chHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEE
Confidence 999766555443 321 2222222 333332222221000
Q ss_pred ---------CCCccCCCccc-ceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccC--------C
Q 006354 495 ---------SVGRVGPPVPC-CYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVD--------E 556 (649)
Q Consensus 495 ---------~~~~vG~p~p~-~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~--------~ 556 (649)
....+|...|+ +.+.|+++++... |.++++|||||.++++..+||.-+..|+..|... +
T Consensus 491 ~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~L---C~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~ 567 (1363)
T KOG3628|consen 491 DTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQL---CKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPP 567 (1363)
T ss_pred cchhhhhhcCccccceecccceEEEEeCCCcccc---cccCcceeEEEecCCcccceeeccccccceEEeeeccccCCCC
Confidence 11335665555 4555666444433 8999999999999999999999888888877641 1
Q ss_pred CcccceeeCcEEEEccCCeEEEEecCCCeEEcCCceeeeCChh----------hhHhccCcccccceEEEec
Q 006354 557 RGMCWFYTGDIGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKI----------PSTTTVLPLLFHHIRLWRN 618 (649)
Q Consensus 557 ~~~~w~~TGDlg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eI----------E~~l~~~p~V~~~~~V~g~ 618 (649)
....+.|||-+|++.+ |.++++|-++|++.--.|.+++..+| +.+.+..+.|. ++.+|-.
T Consensus 568 ~n~~FmRtGLlGFv~~-gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF-~~saf~~ 637 (1363)
T KOG3628|consen 568 SNVPFMRTGLLGFVHN-GKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVF-DVSAFED 637 (1363)
T ss_pred ccchhhhhcceeeeeC-CeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEE-EEeeeec
Confidence 1236899999999985 55666665555544333777776654 55566678888 8888873
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.51 E-value=4.9e-13 Score=141.24 Aligned_cols=248 Identities=14% Similarity=0.132 Sum_probs=149.9
Q ss_pred EEEEeecCCCCCcceEEechHHHHHHHHHHHhhC--CCCCCCcEEEEccCh-HHHHHHHHHHHHHHhCce-EEeCCcccc
Q 006354 278 AVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI--PNPGRSDVYLAYLPL-AHVLELAAESIMLCAGCA-IGYGSTLTM 353 (649)
Q Consensus 278 a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~~d~~l~~~pl-~h~~~~~~~~~~l~~G~~-l~~~~~~~l 353 (649)
..+..||||||.|-.+..+............... .++..++++..++.- .+.+ ..+..... +.+++..
T Consensus 102 ~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~~ly------~~~~~~~~~~~~~~l~-- 173 (430)
T TIGR02304 102 ISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADNNLY------QSVNNRWISLDFFDLL-- 173 (430)
T ss_pred EEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccChhHH------HHHHhccceeeecCCC--
Confidence 4566799999999999999887654433332222 244455555554211 1111 11211111 2222221
Q ss_pred cccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhccccccccchhhhHHH
Q 006354 354 TDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGAWGLERMLWDA 433 (649)
Q Consensus 354 ~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (649)
+. ...++..|++++|+++.+.|+.+..|++...+....
T Consensus 174 -~~----~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~------------------------------------- 211 (430)
T TIGR02304 174 -AP----FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT------------------------------------- 211 (430)
T ss_pred -cC----HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-------------------------------------
Confidence 11 222444599999999999999999998864431100
Q ss_pred HHHHHHHHHhCCceEEEEecCCCCCHHHHHHHHhhcCCccccccCcccccccccccCCCCCCCCccCCCcccceEEEEec
Q 006354 434 IVFKSVRAVLGGRIRFMICGGAPLSADSQRFINICMGAPIGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYIKLVSW 513 (649)
Q Consensus 434 ~~~~~~~~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~ 513 (649)
.+++.++++||+++++..+.+++.||+++++.||+|| +.++.-+.... -.+=...--+|..++|+
T Consensus 212 -----------~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la~eC~~g~---lHl~ed~~~vE~~ivD~ 276 (430)
T TIGR02304 212 -----------IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLASTCRCGT---LHLNEDLVHIEKQYLDE 276 (430)
T ss_pred -----------CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheEEecCCCC---EEEccccEEEEeeEECC
Confidence 1689999999999999999999999999999999999 44433222111 11111111122335662
Q ss_pred CCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEccC----C----eE-EEEecCCC
Q 006354 514 DEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYPD----G----CL-EIIDRKKD 584 (649)
Q Consensus 514 ~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~d----G----~l-~i~GR~dd 584 (649)
++ .++.+|+ ++.| ..+ |= --|+|||++.+.++ | .| .|.||.+|
T Consensus 277 -~~----------~~~~ViT------~L~n------~~~---Pl--IRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD 328 (430)
T TIGR02304 277 -HK----------RFVPIIT------DFTR------TTQ---PI--VRYRLNDILVESEQPCSCGSATMAIERIEGRQDD 328 (430)
T ss_pred -CC----------ceEEEEe------cCCC------ccc---eE--EeeeCCCEEEeCCCCCCCCCcccccCCccCccCC
Confidence 22 1233333 2322 112 22 36999999998544 2 24 48899999
Q ss_pred eEEc--CCceee--eCChhhhHh-ccCcccccceEEEecC
Q 006354 585 IVKL--QHGEYI--SLGKIPSTT-TVLPLLFHHIRLWRNG 619 (649)
Q Consensus 585 ~iki--~~G~~v--~~~eIE~~l-~~~p~V~~~~~V~g~~ 619 (649)
++++ .+|..+ +|..++.++ ...+.|. +.-++...
T Consensus 329 ~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~-~yQi~Q~~ 367 (430)
T TIGR02304 329 IFQLITRSGDEQTVFPDFIRRVILFTLPLIV-EYRVLQTG 367 (430)
T ss_pred EEEEecCCCCeEEeCHHHHHHHHHhcCCCCc-eEEEEEcc
Confidence 9995 456555 888898874 5678888 77666544
No 131
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.17 E-value=1.8e-11 Score=126.45 Aligned_cols=65 Identities=14% Similarity=0.105 Sum_probs=60.3
Q ss_pred cceeeCcEEEE-ccCCeEEEEecCCCeEEcCCc---eeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhhh
Q 006354 560 CWFYTGDIGQV-YPDGCLEIIDRKKDIVKLQHG---EYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQS 632 (649)
Q Consensus 560 ~w~~TGDlg~~-~~dG~l~i~GR~dd~iki~~G---~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~~ 632 (649)
|||+|||+|++ |+||+|+|.||.| +| ++|+|. ||++|.+||+|. +|+|+|.+++..|+.+.++..
T Consensus 209 gW~~TGDlg~~~d~dG~l~~~gR~~------~G~~i~nV~p~-IE~~L~~hp~V~-eaaVvgvpd~~~ge~v~A~Vv 277 (365)
T PRK09188 209 IWLATGKKVYNFITRGLFSWSDGEG------TGDRIDNEAPA-IQAALKSDPAVS-DVAIALFSLPAKGVGLYAFVE 277 (365)
T ss_pred cEEeCCCEEEEEcCCCeEEEEecCc------CCcCceeeCHH-HHHHHHhCCCcc-EEEEEEEEcCCCCeEEEEEEE
Confidence 89999999998 7999999999998 48 899998 999999999999 999999999999988777654
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.64 E-value=1.4e-06 Score=90.40 Aligned_cols=237 Identities=16% Similarity=0.157 Sum_probs=130.1
Q ss_pred CCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC---CCCCC-CcEEEEccChHHH---HHHH--HHHHHHHhCc
Q 006354 273 SQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI---PNPGR-SDVYLAYLPLAHV---LELA--AESIMLCAGC 343 (649)
Q Consensus 273 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~-~d~~l~~~pl~h~---~~~~--~~~~~l~~G~ 343 (649)
..+++..++-||||||.|--+.+.+..+..+..++...+ ..... .-.++...|-... ++.. .....+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 345667788899999998656666666665554443332 12222 2234443343211 1111 1222233444
Q ss_pred eEEeCCcccccccchhhccCccccceeecceEEEechHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhcccccc
Q 006354 344 AIGYGSTLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRVREGVVKKVEEKGGLTKNLFNIGYKRRLAAVEGSWFGA 423 (649)
Q Consensus 344 ~l~~~~~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 423 (649)
...+ +...+ +... ....+.......++..++++|.++-.+...+.+..... .
T Consensus 167 ~~~l-~~~~l-d~~~-~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~-------------------~------ 218 (365)
T PF04443_consen 167 RFAL-DNDEL-DLEG-LIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRF-------------------R------ 218 (365)
T ss_pred eeee-cCCcc-CHHH-HHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcc-------------------c------
Confidence 4333 11111 1100 01111112345678889999987776665433211100 0
Q ss_pred ccchhhhHHHHHHHHHHHHhCCceEEEEecC------CCCCH-HHHHHHHhhcCC----ccccccCcccccccccccCCC
Q 006354 424 WGLERMLWDAIVFKSVRAVLGGRIRFMICGG------APLSA-DSQRFINICMGA----PIGQAYGLTETCAGSTFSEWD 492 (649)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~g~~Lr~i~~gG------~~l~~-~~~~~~~~~~~~----~l~~~YG~TE~~~~~~~~~~~ 492 (649)
+....+.+-.|| +.+++ +..+.+++.+|+ .+++.||+||.......+...
T Consensus 219 -------------------L~~~s~vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~ 279 (365)
T PF04443_consen 219 -------------------LPKGSIVIHGGGWKGRRKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHG 279 (365)
T ss_pred -------------------CCCCCEEEeCCCCCccccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCC
Confidence 001345666665 35764 567888888887 689999999976543333111
Q ss_pred CCCCCccCCCcccceEEEEecCCCCcccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEcc
Q 006354 493 DPSVGRVGPPVPCCYIKLVSWDEGGYKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYP 572 (649)
Q Consensus 493 ~~~~~~vG~p~p~~~v~i~d~~~~~~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~ 572 (649)
. .++|-. +.|+|+++.. +++.|+.|-|.+-.+... . .. +..-|.|+|.+..
T Consensus 280 ~-------~~~p~w-V~iRDp~tl~---~~~~Ge~Gli~vidl~~~-s---------------~p--~~IlTeDlGvl~~ 330 (365)
T PF04443_consen 280 H-------FHVPPW-VIIRDPETLE---PLPPGETGLIQVIDLANT-S---------------YP--GFILTEDLGVLHG 330 (365)
T ss_pred c-------ccCCCe-EEEECCCCCc---CCCCCCeeEEEEEccccc-C---------------CC--cEEEEcceeeecC
Confidence 1 122333 7777876644 488999999987665332 1 12 4577999998865
Q ss_pred C--------CeEEEEecCCCe
Q 006354 573 D--------GCLEIIDRKKDI 585 (649)
Q Consensus 573 d--------G~l~i~GR~dd~ 585 (649)
+ .++.++||.+.-
T Consensus 331 ~~~c~cr~g~~f~vlGR~~~a 351 (365)
T PF04443_consen 331 DDDCGCRKGKYFEVLGRADGA 351 (365)
T ss_pred CCCCCCccCCEEEEEeCCCCC
Confidence 4 279999998753
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=97.82 E-value=0.0001 Score=80.99 Aligned_cols=149 Identities=18% Similarity=0.258 Sum_probs=79.7
Q ss_pred HhCCceEEEEecCCCCCHHHHHHHHhhcC-Cc-cccccCcccccccccccCCCCCCCCccCCCcccc-eEEEEecCCCC-
Q 006354 442 VLGGRIRFMICGGAPLSADSQRFINICMG-AP-IGQAYGLTETCAGSTFSEWDDPSVGRVGPPVPCC-YIKLVSWDEGG- 517 (649)
Q Consensus 442 ~~g~~Lr~i~~gG~~l~~~~~~~~~~~~~-~~-l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~-~v~i~d~~~~~- 517 (649)
.++++|+.|.+-+..-...-.+.++..++ .+ +..+|++||+-......+ .. ..+...++. -...++.++.+
T Consensus 264 ~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i~i~~~~-~~----~~~~l~~~~~ffEFip~~~~~~ 338 (528)
T PF03321_consen 264 RLWPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFIGIPLDP-ED----PGYVLAPDSGFFEFIPVDEDEQ 338 (528)
T ss_dssp HHSTT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEEEEES-C-CC------EEE-TTSSEEEEEE-STT--
T ss_pred HhCCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEEEEecCC-CC----CceEeecCCeEEEEEeccCCcc
Confidence 34689997776555444445556666554 33 458999999643333221 11 111222221 23344433221
Q ss_pred -------c--ccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEcc--CC--eEEEEecCCC
Q 006354 518 -------Y--KTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYP--DG--CLEIIDRKKD 584 (649)
Q Consensus 518 -------~--~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~--dG--~l~i~GR~dd 584 (649)
. ...+..|+.=||+|+.. .|.| -|+.||+.++.. ++ .|.|+||.+.
T Consensus 339 ~~~~~~~~l~~~ele~G~~YelviTt~---~GLy------------------RY~iGDvVrv~gf~~~~P~i~F~~R~~~ 397 (528)
T PF03321_consen 339 NPSEQPKTLLLHELEVGEEYELVITTN---SGLY------------------RYRIGDVVRVTGFYNQTPRIEFVGRRGQ 397 (528)
T ss_dssp -----SSSEEGGG--TT-EEEEEEEST---TS-S------------------SEEECEEEEEEEEETTEEEEEEEEETTE
T ss_pred cccCCCceecHHHhcCCCeEEEEEecc---ccee------------------eeecCCEEEEeeccCCCcEEEEeccCCc
Confidence 1 01145566667777542 2222 489999999852 44 7999999999
Q ss_pred eEEcCCceeeeCChhhhHhccC-----cccccceEEEec
Q 006354 585 IVKLQHGEYISLGKIPSTTTVL-----PLLFHHIRLWRN 618 (649)
Q Consensus 585 ~iki~~G~~v~~~eIE~~l~~~-----p~V~~~~~V~g~ 618 (649)
++.+. ||+++-.+|++++.+. -.+. +-.+..+
T Consensus 398 ~l~l~-gEkl~e~~v~~av~~~~~~~~~~~~-~f~~~~~ 434 (528)
T PF03321_consen 398 VLSLF-GEKLSEEQVQEAVARALQETGLELR-DFTVAPD 434 (528)
T ss_dssp EE-SS-S--EEHHHHHHHHHHHHHCTT-EEE-EEEEEEE
T ss_pred eeecc-eeecCHHHHHHHHHHHHHhcCCcee-eEEEEee
Confidence 99996 9999999999998764 3345 5666655
No 134
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.76 E-value=0.002 Score=71.14 Aligned_cols=138 Identities=14% Similarity=0.257 Sum_probs=78.9
Q ss_pred HHhCCc---eEEEEecCCCCCHHHHHHHHhhc-CC-ccccccCcccccccccccCCCCCCCCccCCC-cc-cceEEEEec
Q 006354 441 AVLGGR---IRFMICGGAPLSADSQRFINICM-GA-PIGQAYGLTETCAGSTFSEWDDPSVGRVGPP-VP-CCYIKLVSW 513 (649)
Q Consensus 441 ~~~g~~---Lr~i~~gG~~l~~~~~~~~~~~~-~~-~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p-~p-~~~v~i~d~ 513 (649)
..++++ +.++..||.. .-...++..+ +. .+..+|++||+.......+... +..++.. ++ +.-...++.
T Consensus 298 ~~lWPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~gi~~~~~~~--p~~~~~~l~~~~~ffEFiP~ 372 (597)
T PLN02249 298 TKIWPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYFGINLNPMCK--PSEVSYTIMPNMAYFEFLPH 372 (597)
T ss_pred HHhCCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceEEEeecCCCCC--CCCcceEecCCcEEEEeeec
Confidence 456688 6666777755 3344555444 34 3568999999654333221111 1111111 11 223333332
Q ss_pred CCCC--------c--ccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEcc----CCeEEEE
Q 006354 514 DEGG--------Y--KTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYP----DGCLEII 579 (649)
Q Consensus 514 ~~~~--------~--~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~----dG~l~i~ 579 (649)
++.+ . ...+..|..=||+|+.. .|-| -|+.||+.++.. --.|.|+
T Consensus 373 ~~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~---~GLy------------------RY~iGDvVrvtgf~~~~P~i~F~ 431 (597)
T PLN02249 373 NHDGDGALDETSLVELADVEVGKEYELVITTY---AGLY------------------RYRVGDILRVTGFHNSAPQFKFI 431 (597)
T ss_pred ccCCcccCCCCcEecHHHcCCCCeEEEEEEcc---ccee------------------EeecCCEEEEeeccCCCcEEEEE
Confidence 2110 0 01144455556666431 1111 388999999853 3469999
Q ss_pred ecCCCeEEcCCceeeeCChhhhHhcc
Q 006354 580 DRKKDIVKLQHGEYISLGKIPSTTTV 605 (649)
Q Consensus 580 GR~dd~iki~~G~~v~~~eIE~~l~~ 605 (649)
||.+.++.+ .|+++.-.+++.++.+
T Consensus 432 gR~~~~ls~-~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 432 RRKNVLLSI-ESDKTDEADLQKAVEN 456 (597)
T ss_pred ccCCcceec-ccccCCHHHHHHHHHH
Confidence 999999998 4999999999998866
No 135
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.63 E-value=0.0023 Score=70.22 Aligned_cols=142 Identities=18% Similarity=0.174 Sum_probs=85.4
Q ss_pred HHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccc-cccCcccccccccccCCCCCCCCccCCCcccce-EEEEecCCCC
Q 006354 441 AVLGGRIRFMICGGAPLSADSQRFINICM-GAPIG-QAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCY-IKLVSWDEGG 517 (649)
Q Consensus 441 ~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~-v~i~d~~~~~ 517 (649)
..+++++++|.+--..-...-...++... |+++. -.||+||+.+.....+..+... .....+|++. ...++.++++
T Consensus 289 ~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p~~~p~~-~sy~L~p~~~yFEFip~~~~~ 367 (606)
T PLN02247 289 KRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKPLSDPSD-VSYTLLPNMAYFEFLPVDKNN 367 (606)
T ss_pred HHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCcCCCccC-CceeecCCcEEEEEeecCCCc
Confidence 56779999998865555555556666544 56655 6999999765554443321111 1222334432 2334322221
Q ss_pred c--------------------------ccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEc
Q 006354 518 Y--------------------------KTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVY 571 (649)
Q Consensus 518 ~--------------------------~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~ 571 (649)
. ...+..|..=||+|+.- .|. =-||.||+.++.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~---~GL------------------YRYrlGDvv~V~ 426 (606)
T PLN02247 368 GEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTF---TGL------------------YRYRVGDILMVT 426 (606)
T ss_pred ccccccccccccccccccccccCceecHHHccCCCeEEEEEEec---Cce------------------EEEecCCEEEEe
Confidence 0 00134444556655421 111 147899999874
Q ss_pred ----cCCeEEEEecCCCeEEcCCceeeeCChhhhHhcc
Q 006354 572 ----PDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTV 605 (649)
Q Consensus 572 ----~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~ 605 (649)
..-.|.|++|.+.+..+ .|++.+-.++-.++.+
T Consensus 427 GF~n~~P~~~Fv~R~~~vlsi-~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 427 GFYNNAPQFRFVQRRNVVLSI-DTDKTNEEDLLKAVTQ 463 (606)
T ss_pred eecCCCceEEEEecCCceeec-ccccCCHHHHHHHHHH
Confidence 34579999999999999 4999999998877755
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.52 E-value=0.0073 Score=66.21 Aligned_cols=142 Identities=15% Similarity=0.141 Sum_probs=84.3
Q ss_pred HHhCCceEEEEecCCCCCHHHHHHHHhhc-CCccc-cccCcccccccccccCCCCCCCCccCCCcccceE-EEEecCCCC
Q 006354 441 AVLGGRIRFMICGGAPLSADSQRFINICM-GAPIG-QAYGLTETCAGSTFSEWDDPSVGRVGPPVPCCYI-KLVSWDEGG 517 (649)
Q Consensus 441 ~~~g~~Lr~i~~gG~~l~~~~~~~~~~~~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~vG~p~p~~~v-~i~d~~~~~ 517 (649)
..+++++++|.+-...-...-...++... |++++ -.|++||+.+.....+..+... .....+|++.. ..++.++.+
T Consensus 300 ~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~~~p~~-~sy~L~p~~~yFEFip~~~~~ 378 (612)
T PLN02620 300 TRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSE-VSYTLIPTMAYFEFLPVHRNN 378 (612)
T ss_pred HHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCCCCCccc-ceeeecCCcEEEEEeeccCcc
Confidence 56789999988865555555555555444 56654 8999999765554444322111 11222344322 233211100
Q ss_pred ---------------------cccCCCCCCccEEEEccccccccccCCCccchhhhccCCCcccceeeCcEEEEc----c
Q 006354 518 ---------------------YKTSDKPMPRGEIVVGGFNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVY----P 572 (649)
Q Consensus 518 ---------------------~~~~~~~g~~GEl~v~g~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~----~ 572 (649)
....+..|..=||+|+.. .|. =-||.||+.++. .
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~---~GL------------------yRYrlGDvv~V~Gf~n~ 437 (612)
T PLN02620 379 GVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTY---AGL------------------YRYRVGDVLRVAGFKNK 437 (612)
T ss_pred cccccccccccccccccCccccHHHccCCCeEEEEEEec---Cce------------------EEEecCCEEEEeeecCC
Confidence 001134455556665431 111 147899999884 3
Q ss_pred CCeEEEEecCCCeEEcCCceeeeCChhhhHhcc
Q 006354 573 DGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTV 605 (649)
Q Consensus 573 dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~ 605 (649)
.-.|.|++|.+-+..+ .|++.+-.++-.++.+
T Consensus 438 ~P~~~Fv~R~~~~lsi-~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 438 APQFSFICRKNVVLSI-DSDKTDEVELQNAVKN 469 (612)
T ss_pred CceEEEEeecCceeec-ccccCCHHHHHHHHHH
Confidence 4579999999999998 5999999998777754
No 137
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=95.60 E-value=0.0018 Score=50.49 Aligned_cols=34 Identities=12% Similarity=-0.033 Sum_probs=29.6
Q ss_pred hhhhHhccCcccccceEEEecCCCCcccchhhhhh
Q 006354 598 KIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQS 632 (649)
Q Consensus 598 eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~~ 632 (649)
|||++|.+||+|. +|+|++.+++..|+.+.++..
T Consensus 1 EIE~~l~~~~~V~-~~~V~~~~d~~~g~~l~a~vv 34 (73)
T PF13193_consen 1 EIESVLRQHPGVA-EAAVVGVPDEDWGERLVAFVV 34 (73)
T ss_dssp HHHHHHHTSTTEE-EEEEEEEEETTTEEEEEEEEE
T ss_pred CHHHHHhcCCCcc-EEEEEEEEcccccccceeEEE
Confidence 7999999999999 999999999988876665553
No 138
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=94.01 E-value=0.68 Score=48.90 Aligned_cols=92 Identities=14% Similarity=0.030 Sum_probs=77.4
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
--+|+.++...+..+|+.|...|..+||+|.++.--+. .-+-..+|+.++|+.++|+.+.. -++...++++.++.++
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~-~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN-TERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-HHHHHHHHHhcCCcEE
Confidence 35899999999999999999999999999998877332 22678899999999999998843 4666788999999999
Q ss_pred EECchhHHHHHHhhc
Q 006354 207 ICDSKQLKKLSAVSS 221 (649)
Q Consensus 207 i~~~~~~~~l~~~~~ 221 (649)
.+.+..+-.+.+...
T Consensus 187 ~~tps~~l~lae~~~ 201 (438)
T COG1541 187 AATPSYLLYLAEEAE 201 (438)
T ss_pred EEChHHHHHHHHHHH
Confidence 999998877766543
No 139
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=88.18 E-value=5.4 Score=42.83 Aligned_cols=88 Identities=11% Similarity=0.033 Sum_probs=68.8
Q ss_pred EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEE
Q 006354 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 130 ~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (649)
.+|..++......++..+...|+++||++......+. ......++..+.|+..+++.+.. .+.+...|++.++++++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 4688888777777888888889999999887665443 22334677889999999887654 57788999999999999
Q ss_pred ECchhHHHHHH
Q 006354 208 CDSKQLKKLSA 218 (649)
Q Consensus 208 ~~~~~~~~l~~ 218 (649)
+.+..+..+.+
T Consensus 173 ~~Ps~l~~L~~ 183 (422)
T TIGR02155 173 VTPSYMLNLLE 183 (422)
T ss_pred EcHHHHHHHHH
Confidence 99988766654
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=87.94 E-value=6.2 Score=42.75 Aligned_cols=86 Identities=14% Similarity=0.105 Sum_probs=66.4
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~--~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|.+++...+...+..+...|+.+||++.++.+.+.. .....+++.+.|+.++|... .+....++++.++..+
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 457999999888888988888999999999999876643 23456788999998887643 2345678899999999
Q ss_pred EECchhHHHHH
Q 006354 207 ICDSKQLKKLS 217 (649)
Q Consensus 207 i~~~~~~~~l~ 217 (649)
+........+.
T Consensus 181 ~~~ps~ll~La 191 (445)
T TIGR03335 181 VASVFKLLRLA 191 (445)
T ss_pred EECHHHHHHHH
Confidence 88776654443
No 141
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=77.25 E-value=33 Score=37.57 Aligned_cols=87 Identities=11% Similarity=0.140 Sum_probs=67.0
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|++.+...+..+.. ..+++++|++...++-.. .+...+++++..|+.+++. +...++.+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAE---YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHH---hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 46899988765554433 347899999988877543 3455689999999988765 56788999999999999999
Q ss_pred EECchhHHHHHHh
Q 006354 207 ICDSKQLKKLSAV 219 (649)
Q Consensus 207 i~~~~~~~~l~~~ 219 (649)
......+..+.+.
T Consensus 260 ~~~p~~~~~l~~~ 272 (513)
T PRK07656 260 PGPPTMYNSLLQH 272 (513)
T ss_pred echHHHHHHHHcC
Confidence 9988887776553
No 142
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=75.03 E-value=48 Score=35.08 Aligned_cols=120 Identities=18% Similarity=0.154 Sum_probs=83.5
Q ss_pred CCCCcceEEeeecCccccccCCCccceeecCC--CceEEeHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEccCC--HHHH
Q 006354 95 HPQDRFLGKRKLLGKDFVTASDGRKFEKLHLG--DYEWQTYGEVFDRACSFASGLVN-FGHNVDTRAAILAETC--VEWF 169 (649)
Q Consensus 95 ~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~--~~~~~TY~eL~~~~~~lA~~L~~-~Gv~~gd~V~i~~~~~--~~~v 169 (649)
.|+.+|++.-. .|. .| ....+|++.+...+..++ +.. .+++ |++..++|-+ ..++
T Consensus 153 ~~~~~~~i~~T----------SGT------TG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~ 212 (417)
T PF00501_consen 153 SPDDPAFILFT----------SGT------TGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLI 212 (417)
T ss_dssp TTTSEEEEEEE----------SSS------SSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHH
T ss_pred CccceeEeecc----------ccc------cccccccccccccccccccccc--cccccccC--ceEEeecccccccccc
Confidence 57888887643 333 12 235689999999888877 433 2333 6666666654 3444
Q ss_pred HHHHHHHhcCCEEEEecCCCC--HHHHHHHHhhcCceEEEECchhHHHHHHhh--------ccCCCccEEEEecC
Q 006354 170 IAFQGCFRQSITVVTIYSSLG--EDALIHSLNETQVTTLICDSKQLKKLSAVS--------SSLKTIKNVIYFEN 234 (649)
Q Consensus 170 va~lA~~~~G~~~vpl~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~--------~~~~~~~~ii~~~~ 234 (649)
..+++.+..|+..+..+.... ++.+...+++.+++.+++.+..+..+.+.. ..++.++.++..++
T Consensus 213 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~ 287 (417)
T PF00501_consen 213 SALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGE 287 (417)
T ss_dssp HHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESS
T ss_pred ccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccc
Confidence 789999999999998876644 677889999999999999999888877622 14556777776443
No 143
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=69.52 E-value=1.1e+02 Score=32.19 Aligned_cols=103 Identities=19% Similarity=0.125 Sum_probs=76.2
Q ss_pred ceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH-HHHHHHHHHhcCCEEEEecCCCC--HHHHHHHHhhcCce
Q 006354 128 YEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLG--EDALIHSLNETQVT 204 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~-~vva~lA~~~~G~~~vpl~~~~~--~~~l~~~l~~~~~~ 204 (649)
...+|++.+...+..+.. ..+++++|++....+-... .+..+++.+..|+..+..+.... ++.+..+++..+++
T Consensus 137 ~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t 213 (408)
T TIGR01733 137 GVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVT 213 (408)
T ss_pred EEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCce
Confidence 456788888877766655 4477889999888776543 45667888889988887766554 78999999999999
Q ss_pred EEEECchhHHHHHHhh-ccCCCccEEEEec
Q 006354 205 TLICDSKQLKKLSAVS-SSLKTIKNVIYFE 233 (649)
Q Consensus 205 ~vi~~~~~~~~l~~~~-~~~~~~~~ii~~~ 233 (649)
.+++....+..+.+.. ...+.++.++..+
T Consensus 214 ~l~~~p~~~~~l~~~~~~~~~~l~~v~~~g 243 (408)
T TIGR01733 214 VLNLTPSLLALLAAALPPALASLRLVILGG 243 (408)
T ss_pred EEEeCHHHHHHHHHhhhhcccCceEEEEeC
Confidence 9999998887776543 2445666665533
No 144
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=68.00 E-value=1.2e+02 Score=33.68 Aligned_cols=101 Identities=15% Similarity=0.094 Sum_probs=70.3
Q ss_pred ceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC--HHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceE
Q 006354 128 YEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTT 205 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~--~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 205 (649)
.-.+|++.+...+... ....++.++|++..++|-. ..+...++..+..|+..+.......++.+...+++.++++
T Consensus 200 gV~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~ 276 (539)
T PRK06334 200 GVPLTHANLLANQRAC---LKFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTF 276 (539)
T ss_pred EEEEcHHHHHHHHHHH---HHhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcE
Confidence 3468998887654433 3345788999988887743 2333446777888988776655577899999999999999
Q ss_pred EEECchhHHHHHHhh----ccCCCccEEEE
Q 006354 206 LICDSKQLKKLSAVS----SSLKTIKNVIY 231 (649)
Q Consensus 206 vi~~~~~~~~l~~~~----~~~~~~~~ii~ 231 (649)
+...+..+..+.+.. ...+.++.++.
T Consensus 277 ~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~ 306 (539)
T PRK06334 277 LGSTPVFFDYILKTAKKQESCLPSLRFVVI 306 (539)
T ss_pred EEecHHHHHHHHHhhhhcccccccccEEEE
Confidence 999998877665432 23445665554
No 145
>PRK12583 acyl-CoA synthetase; Provisional
Probab=67.80 E-value=75 Score=35.26 Aligned_cols=86 Identities=14% Similarity=0.179 Sum_probs=64.4
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccC--CHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAET--CVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~--~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|++.+...+..+... .+++++|++....+- ...++..+++++..|+.++.......+.++...+++.+++++
T Consensus 219 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 468999886655554433 488999999877764 345667788889999988754556778888999999999999
Q ss_pred EECchhHHHHH
Q 006354 207 ICDSKQLKKLS 217 (649)
Q Consensus 207 i~~~~~~~~l~ 217 (649)
+..+..+..+.
T Consensus 296 ~~~P~~~~~l~ 306 (558)
T PRK12583 296 YGVPTMFIAEL 306 (558)
T ss_pred eccHHHHHHHH
Confidence 98887654443
No 146
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=67.39 E-value=59 Score=34.68 Aligned_cols=98 Identities=11% Similarity=0.120 Sum_probs=70.7
Q ss_pred ceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH-HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 128 YEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV-EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~-~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
...+|++.+...+..++.. .+++++|++....+-.. ..+..+++.+..|+..+..++. +.+...+++.++.++
T Consensus 128 ~v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~ 201 (436)
T TIGR01923 128 AVPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHI 201 (436)
T ss_pred EEEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEE
Confidence 3468999988776666554 48899999988877543 2234568889999988877543 488889999999999
Q ss_pred EECchhHHHHHHhhccCCCccEEEE
Q 006354 207 ICDSKQLKKLSAVSSSLKTIKNVIY 231 (649)
Q Consensus 207 i~~~~~~~~l~~~~~~~~~~~~ii~ 231 (649)
......+..+.+.....+.++.++.
T Consensus 202 ~~~P~~l~~l~~~~~~~~~l~~~~~ 226 (436)
T TIGR01923 202 SLVPTQLNRLLDEGGHNENLRKILL 226 (436)
T ss_pred EeHHHHHHHHHhCcCCCCceEEEEE
Confidence 9998887776654433345555555
No 147
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=66.41 E-value=57 Score=35.67 Aligned_cols=87 Identities=8% Similarity=-0.028 Sum_probs=66.5
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~-vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (649)
-.+|++.+...+..... ..+++++|++....+..... +...++++..|+..+..+.. +++.+...+++.++..++
T Consensus 185 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~ 260 (521)
T PRK06187 185 VVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFF 260 (521)
T ss_pred EEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEE
Confidence 46899998866665544 55889999998888755322 34445588899988877664 889999999999999999
Q ss_pred ECchhHHHHHHh
Q 006354 208 CDSKQLKKLSAV 219 (649)
Q Consensus 208 ~~~~~~~~l~~~ 219 (649)
+....+..+.+.
T Consensus 261 ~~p~~~~~l~~~ 272 (521)
T PRK06187 261 AVPTIWQMLLKA 272 (521)
T ss_pred chHHHHHHHHcC
Confidence 998877766543
No 148
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=64.84 E-value=1.2e+02 Score=33.77 Aligned_cols=87 Identities=10% Similarity=-0.001 Sum_probs=64.8
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~--~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
-.+|++.+...+. ......++.++|++....+.... ....+++.+..|+..+.......++.+...+++.+++++
T Consensus 223 V~~s~~~l~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 299 (570)
T PRK04319 223 VLHVHNAMLQHYQ---TGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVW 299 (570)
T ss_pred EEEecHHHHHHHH---HHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEE
Confidence 3578888755433 33344578899987666554432 245677888999988877777889999999999999999
Q ss_pred EECchhHHHHHH
Q 006354 207 ICDSKQLKKLSA 218 (649)
Q Consensus 207 i~~~~~~~~l~~ 218 (649)
...+..+..+.+
T Consensus 300 ~~~P~~~~~l~~ 311 (570)
T PRK04319 300 YTAPTAIRMLMG 311 (570)
T ss_pred EeCHHHHHHHHh
Confidence 999988877654
No 149
>PLN03051 acyl-activating enzyme; Provisional
Probab=64.32 E-value=72 Score=34.96 Aligned_cols=87 Identities=9% Similarity=-0.154 Sum_probs=62.1
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~-~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (649)
-.+|++.+...+... ....++.++|++...+|-+.. .+..+++.+..|+..+.......++.+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 357877765433322 234588899988776664431 2345778889999988776555678899999999999999
Q ss_pred ECchhHHHHHH
Q 006354 208 CDSKQLKKLSA 218 (649)
Q Consensus 208 ~~~~~~~~l~~ 218 (649)
..+..+..+.+
T Consensus 214 ~vP~~~~~l~~ 224 (499)
T PLN03051 214 LVPSIVKAWRH 224 (499)
T ss_pred eCHHHHHHHHh
Confidence 99888776654
No 150
>PRK08308 acyl-CoA synthetase; Validated
Probab=64.12 E-value=1.6e+02 Score=31.09 Aligned_cols=99 Identities=10% Similarity=0.076 Sum_probs=70.1
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|++.+...+..+.. ..++..+|++...+|..- .++..++..+..|+..+... ...++.+...+++.+++++
T Consensus 119 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNE---ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHH---hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEE
Confidence 45799988766555544 346778898888777553 44567888999999887664 4567888889999999999
Q ss_pred EECchhHHHHHHhhccCCCccEEEE
Q 006354 207 ICDSKQLKKLSAVSSSLKTIKNVIY 231 (649)
Q Consensus 207 i~~~~~~~~l~~~~~~~~~~~~ii~ 231 (649)
+..+..+..+.+.......++.++.
T Consensus 195 ~~~P~~~~~l~~~~~~~~~l~~~~~ 219 (414)
T PRK08308 195 YAVPLMLHILGRLLPGTFQFHAVMT 219 (414)
T ss_pred EcCHHHHHHHHhcCCccccccEEEE
Confidence 9988887776654332234444443
No 151
>PRK08315 AMP-binding domain protein; Validated
Probab=59.23 E-value=69 Score=35.58 Aligned_cols=86 Identities=13% Similarity=0.126 Sum_probs=64.9
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccC--CHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAET--CVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~--~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|++.+...+..+... .+++++|++....+- ...++..+++.+..|+..+.......+.++...+++.+++++
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 457888886655544433 488999999887775 345566778899999988866666788899999999999999
Q ss_pred EECchhHHHHH
Q 006354 207 ICDSKQLKKLS 217 (649)
Q Consensus 207 i~~~~~~~~l~ 217 (649)
+.....+..+.
T Consensus 294 ~~~P~~~~~~~ 304 (559)
T PRK08315 294 YGVPTMFIAEL 304 (559)
T ss_pred ecchHHHHHHH
Confidence 98887665443
No 152
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=58.68 E-value=40 Score=32.62 Aligned_cols=54 Identities=9% Similarity=0.052 Sum_probs=45.1
Q ss_pred HHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCc
Q 006354 148 VNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQV 203 (649)
Q Consensus 148 ~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~ 203 (649)
...|+.++|++. .+|-.. .+...+++++..|++.|.+ +.+.++++...+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 567899999999 888654 4556799999999998887 68999999999888765
No 153
>PRK07638 acyl-CoA synthetase; Validated
Probab=58.40 E-value=1.1e+02 Score=33.18 Aligned_cols=87 Identities=8% Similarity=0.047 Sum_probs=64.7
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~-~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (649)
-.+|.+.+...+...+ ...+++++|++....+-... ++...+..+..|+..+.. +...++++...+++.+++++.
T Consensus 161 v~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 4578877765544333 34578899998887665433 345667778889988755 567889999999999999999
Q ss_pred ECchhHHHHHHh
Q 006354 208 CDSKQLKKLSAV 219 (649)
Q Consensus 208 ~~~~~~~~l~~~ 219 (649)
..+.....+...
T Consensus 237 ~~P~~~~~l~~~ 248 (487)
T PRK07638 237 TVPTMLESLYKE 248 (487)
T ss_pred eCcHHHHHHHhC
Confidence 999888777655
No 154
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=56.44 E-value=3.1 Score=34.23 Aligned_cols=25 Identities=12% Similarity=0.007 Sum_probs=20.2
Q ss_pred ceeeeCChhhhHhccCcccccceEEE
Q 006354 591 GEYISLGKIPSTTTVLPLLFHHIRLW 616 (649)
Q Consensus 591 G~~v~~~eIE~~l~~~p~V~~~~~V~ 616 (649)
|.+|+|.+||++|.++|++. .-+.+
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~-~~y~i 25 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVS-PEYQI 25 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEE-EEEEE
T ss_pred CcEECHHHHHHHHHhCcCCC-CcEEE
Confidence 78999999999999999998 44333
No 155
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=55.86 E-value=2e+02 Score=31.98 Aligned_cols=86 Identities=12% Similarity=0.075 Sum_probs=63.1
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~-~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (649)
-.+|++.+...+.... ...++.++|++..++|-... .+...++.+..|+..+.. +...+..+...+++.++.++.
T Consensus 190 V~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~ 265 (563)
T PLN02860 190 VTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-PKFDAKAALQAIKQHNVTSMI 265 (563)
T ss_pred EEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-CCCCHHHHHHHHHHhCCeeEE
Confidence 3578888765444332 34588999998888775432 234567888889887765 567889999999999999999
Q ss_pred ECchhHHHHHH
Q 006354 208 CDSKQLKKLSA 218 (649)
Q Consensus 208 ~~~~~~~~l~~ 218 (649)
..+..+..+.+
T Consensus 266 ~~P~~~~~l~~ 276 (563)
T PLN02860 266 TVPAMMADLIS 276 (563)
T ss_pred eChHHHHHHHH
Confidence 99988776654
No 156
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=54.88 E-value=1.3e+02 Score=32.94 Aligned_cols=87 Identities=17% Similarity=0.110 Sum_probs=67.2
Q ss_pred ceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 128 YEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~-~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
...+|++.+...+..+... .++.++|++...++-+.. .+..+++++..|+..+.. +...++.+...+++.++.++
T Consensus 178 ~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 253 (515)
T TIGR03098 178 GVVLSHRNLVAGAQSVATY---LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGL 253 (515)
T ss_pred eEEEecHHHHHHHHHHHHH---hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceE
Confidence 3468999887766655543 367899999988886543 345678889999988855 45778999999999999999
Q ss_pred EECchhHHHHHH
Q 006354 207 ICDSKQLKKLSA 218 (649)
Q Consensus 207 i~~~~~~~~l~~ 218 (649)
...+..+..+.+
T Consensus 254 ~~~P~~~~~l~~ 265 (515)
T TIGR03098 254 AAVPPLWAQLAQ 265 (515)
T ss_pred ecChHHHHHHHh
Confidence 999988776654
No 157
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=53.17 E-value=1.8e+02 Score=33.09 Aligned_cols=70 Identities=13% Similarity=-0.031 Sum_probs=53.3
Q ss_pred HCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecC---CCCHHHHHHHHhhcCceEEEECchhHHHHHH
Q 006354 149 NFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYS---SLGEDALIHSLNETQVTTLICDSKQLKKLSA 218 (649)
Q Consensus 149 ~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~ 218 (649)
..++.++|++..+.+.+..+...+++.+..|++.+..+. ...++++..++++.+++.+.+.......+..
T Consensus 299 ~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 371 (655)
T PRK03584 299 HCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEK 371 (655)
T ss_pred hcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHh
Confidence 347889998877766665444456788999999887753 2357889999999999999988887766654
No 158
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=51.10 E-value=1.7e+02 Score=32.37 Aligned_cols=88 Identities=10% Similarity=-0.043 Sum_probs=61.4
Q ss_pred eEEeHHHHHHHHHHHHHHH-HHCCCCCCCEEEEEccCCHHH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGL-VNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L-~~~Gv~~gd~V~i~~~~~~~~-vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|.+.+...+ .+..+ ...++.++|++..+.|-.-.+ ....++.+..|+..+...+...++.+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 356776664322 22233 234788999988777643222 33346778899988877777889999999999999999
Q ss_pred EECchhHHHHHH
Q 006354 207 ICDSKQLKKLSA 218 (649)
Q Consensus 207 i~~~~~~~~l~~ 218 (649)
......+..+.+
T Consensus 272 ~~~P~~~~~l~~ 283 (539)
T PRK07008 272 AGVPTVWLGLLN 283 (539)
T ss_pred EechHHHHHHHh
Confidence 988887766654
No 159
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=49.50 E-value=3.4e+02 Score=29.42 Aligned_cols=87 Identities=15% Similarity=0.177 Sum_probs=65.5
Q ss_pred CceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEcc--CCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCce
Q 006354 127 DYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAE--TCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVT 204 (649)
Q Consensus 127 ~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~--~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~ 204 (649)
....+|--++...+..++..+ |+...+++.+-.| .+.-.++..+|++..|++.|.-+|.+.+...-..+++-+++
T Consensus 250 KgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT 326 (596)
T KOG1177|consen 250 KGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCT 326 (596)
T ss_pred cceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceE
Confidence 345789999988888777655 5655444444333 33456888999999999999889998888888888899999
Q ss_pred EEEECchhHHHH
Q 006354 205 TLICDSKQLKKL 216 (649)
Q Consensus 205 ~vi~~~~~~~~l 216 (649)
.++..+.-.--+
T Consensus 327 ~l~gtPtM~~Dl 338 (596)
T KOG1177|consen 327 TLYGTPTMFVDL 338 (596)
T ss_pred EEecChHHHHHH
Confidence 999988754433
No 160
>PRK07788 acyl-CoA synthetase; Validated
Probab=49.43 E-value=1.2e+02 Score=33.73 Aligned_cols=98 Identities=10% Similarity=0.080 Sum_probs=66.5
Q ss_pred EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEE
Q 006354 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLIC 208 (649)
Q Consensus 130 ~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~-vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 208 (649)
.+|++.+...+. ......++.++|++....|-.-.+ +..+++++..|+.++.. +...++++...+++.+++.+..
T Consensus 226 ~~s~~~~~~~~~---~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~ 301 (549)
T PRK07788 226 PRPEPSPLAPLA---GLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALVV 301 (549)
T ss_pred eccCccHHHHHH---HHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEEE
Confidence 466666654433 334456888999888777654332 23456678889887765 5677889999999999999999
Q ss_pred CchhHHHHHHhhc------cCCCccEEEE
Q 006354 209 DSKQLKKLSAVSS------SLKTIKNVIY 231 (649)
Q Consensus 209 ~~~~~~~l~~~~~------~~~~~~~ii~ 231 (649)
.+..+..+.+... ..+.++.++.
T Consensus 302 ~P~~~~~l~~~~~~~~~~~~~~~lr~i~~ 330 (549)
T PRK07788 302 VPVMLSRILDLGPEVLAKYDTSSLKIIFV 330 (549)
T ss_pred HHHHHHHHHhCcccccCCCCCCceeEEEE
Confidence 9988877654332 2345555554
No 161
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=49.03 E-value=2.8e+02 Score=32.11 Aligned_cols=86 Identities=9% Similarity=-0.019 Sum_probs=61.7
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC--HHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~--~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
-.+|++.+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+..+..+.......+...+++.+++.+
T Consensus 383 v~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~ 459 (718)
T PRK08043 383 VVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVL 459 (718)
T ss_pred EEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEE
Confidence 46899888776655443 34789999998887753 34455678889999988866544455677778888999988
Q ss_pred EECchhHHHHH
Q 006354 207 ICDSKQLKKLS 217 (649)
Q Consensus 207 i~~~~~~~~l~ 217 (649)
.........+.
T Consensus 460 ~~~p~~~~~l~ 470 (718)
T PRK08043 460 FGTSTFLGNYA 470 (718)
T ss_pred EchHHHHHHhh
Confidence 88776655443
No 162
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=47.54 E-value=69 Score=24.87 Aligned_cols=65 Identities=20% Similarity=0.189 Sum_probs=52.7
Q ss_pred EeHHHHHHHHHHHHH---HHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 131 QTYGEVFDRACSFAS---GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 131 ~TY~eL~~~~~~lA~---~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
.||+||.+.-..++. +|.+..+..+|-|+|+.-++.... -++.++...+.++++.-+++.++++=
T Consensus 10 ~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~Sy-----------~V~Fl~~~~s~eev~~ele~mga~in 77 (88)
T COG4009 10 ATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSSY-----------YVVFLEEVESEEEVERELEDMGAEIN 77 (88)
T ss_pred eeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCceeE-----------EEEEEeccCCHHHHHHHHHHhCchhc
Confidence 799999998876654 566678899999999987775432 46788888999999999999998754
No 163
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=47.28 E-value=79 Score=33.17 Aligned_cols=78 Identities=6% Similarity=0.116 Sum_probs=56.6
Q ss_pred HHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHhhcCceEEEEC-----
Q 006354 140 ACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLICD----- 209 (649)
Q Consensus 140 ~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~----- 209 (649)
...+.-.|+.+++++||-|.+ .+.-|+.+.=+++..|+.+|.+|-+ .+++.++..+..- .+.||.-
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~ 134 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQ 134 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccC
Confidence 355666778889999995544 5678899999999999999998755 4688998888874 5656542
Q ss_pred chhHHHHHHhhc
Q 006354 210 SKQLKKLSAVSS 221 (649)
Q Consensus 210 ~~~~~~l~~~~~ 221 (649)
....+.+.++.+
T Consensus 135 ~~dm~~i~~la~ 146 (374)
T COG0399 135 PCDMDAIMALAK 146 (374)
T ss_pred CCCHHHHHHHHH
Confidence 234555555543
No 164
>PLN03052 acetate--CoA ligase; Provisional
Probab=46.91 E-value=1.9e+02 Score=33.56 Aligned_cols=86 Identities=10% Similarity=-0.091 Sum_probs=58.6
Q ss_pred EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEE
Q 006354 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLIC 208 (649)
Q Consensus 130 ~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~-~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 208 (649)
.+|.+.+...+ .......+++++|++....+-+.. +...+++.+..|+..+..+......++..++++.+++++.+
T Consensus 375 v~sh~~~l~~~---~~~~~~~~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~ 451 (728)
T PLN03052 375 PWTQLTPLRAA---ADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGT 451 (728)
T ss_pred EECchHHHHHH---HHHHHhcCCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEE
Confidence 45666543332 222333688999987766554432 23345688999999987764433457889999999999999
Q ss_pred CchhHHHHHH
Q 006354 209 DSKQLKKLSA 218 (649)
Q Consensus 209 ~~~~~~~l~~ 218 (649)
.+.....+..
T Consensus 452 ~Pt~l~~l~~ 461 (728)
T PLN03052 452 VPSIVKTWKN 461 (728)
T ss_pred CHHHHHHHHh
Confidence 9988776654
No 165
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=46.86 E-value=50 Score=34.56 Aligned_cols=64 Identities=8% Similarity=0.119 Sum_probs=44.7
Q ss_pred HHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHhhcCceEEEE
Q 006354 141 CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLIC 208 (649)
Q Consensus 141 ~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~ 208 (649)
..+-..|..+|+++||.|.+- ...+..+.-|+..+|+.+|.+|.+ ..++.+...+..-. ++|+.
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~ 119 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILV 119 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEE
T ss_pred HHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEE
Confidence 455566777999999998886 445666778899999999988655 45888888877533 55554
No 166
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=46.47 E-value=3.9e+02 Score=29.45 Aligned_cols=86 Identities=10% Similarity=0.038 Sum_probs=64.0
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|++.+...+.. .....+++++|++....+-+. .++..+++.+..|+..+.. +...++.+...+++.++.++
T Consensus 215 v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~vt~~ 290 (547)
T PRK13295 215 VMHTANTLMANIVP---YAERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQ-DIWDPARAAELIRTEGVTFT 290 (547)
T ss_pred EEeccHHHHHHHHH---HHHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeC-CCCCHHHHHHHHHHcCCcEE
Confidence 45788887655444 334457899999988887653 3456678888999987765 46778999999999999999
Q ss_pred EECchhHHHHHH
Q 006354 207 ICDSKQLKKLSA 218 (649)
Q Consensus 207 i~~~~~~~~l~~ 218 (649)
+.....+..+..
T Consensus 291 ~~~p~~~~~l~~ 302 (547)
T PRK13295 291 MASTPFLTDLTR 302 (547)
T ss_pred EecHHHHHHHHh
Confidence 888777665544
No 167
>PRK05852 acyl-CoA synthetase; Validated
Probab=44.26 E-value=2.9e+02 Score=30.40 Aligned_cols=88 Identities=7% Similarity=-0.025 Sum_probs=64.7
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEE-ecCCCCHHHHHHHHhhcCceE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVT-IYSSLGEDALIHSLNETQVTT 205 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vp-l~~~~~~~~l~~~l~~~~~~~ 205 (649)
..+|++.+...+..+...+ +++++|++..+.|... .++..+++.+..|+..+. -.....+..+...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 4578888877666655443 6889998888877543 456678888888876553 233467788889999999999
Q ss_pred EEECchhHHHHHHh
Q 006354 206 LICDSKQLKKLSAV 219 (649)
Q Consensus 206 vi~~~~~~~~l~~~ 219 (649)
++..+.....+.+.
T Consensus 271 ~~~~P~~~~~l~~~ 284 (534)
T PRK05852 271 YTAVPTIHQILLER 284 (534)
T ss_pred EEcChHHHHHHHhh
Confidence 99998887776553
No 168
>PRK08316 acyl-CoA synthetase; Validated
Probab=44.16 E-value=2.1e+02 Score=31.28 Aligned_cols=87 Identities=9% Similarity=0.048 Sum_probs=64.5
Q ss_pred ceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceE
Q 006354 128 YEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTT 205 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 205 (649)
...+|++.+... .+......+++++|++...+|-.. .+...+++++..|+..++.. ...++.+...+++.++.+
T Consensus 188 ~v~~s~~~l~~~---~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~ 263 (523)
T PRK08316 188 GAMLTHRALIAE---YVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITS 263 (523)
T ss_pred EEEEecHHHHHH---HHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeE
Confidence 346888888654 334455568999999988877543 33445677888999988774 457889999999999999
Q ss_pred EEECchhHHHHHH
Q 006354 206 LICDSKQLKKLSA 218 (649)
Q Consensus 206 vi~~~~~~~~l~~ 218 (649)
+++.+..+..+.+
T Consensus 264 ~~~~P~~~~~l~~ 276 (523)
T PRK08316 264 FFAPPTVWISLLR 276 (523)
T ss_pred EEeCHHHHHHHHc
Confidence 9998887665543
No 169
>PRK06164 acyl-CoA synthetase; Validated
Probab=43.80 E-value=2.5e+02 Score=30.85 Aligned_cols=86 Identities=13% Similarity=0.154 Sum_probs=65.4
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH-HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV-EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~-~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (649)
..+|.+.+...+..++..+ ++.+++++..++|-+- -.+..+++.+..|+..+.. +...+.++...+++.++.+++
T Consensus 199 v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~~~ 274 (540)
T PRK06164 199 VLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PVFDAARTARALRRHRVTHTF 274 (540)
T ss_pred EEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CCCCHHHHHHHHHHhCCeeec
Confidence 4678888877666555444 7889999988887642 2345678888889887765 567788999999999999999
Q ss_pred ECchhHHHHHH
Q 006354 208 CDSKQLKKLSA 218 (649)
Q Consensus 208 ~~~~~~~~l~~ 218 (649)
.....+..+..
T Consensus 275 ~~p~~l~~l~~ 285 (540)
T PRK06164 275 GNDEMLRRILD 285 (540)
T ss_pred CCHHHHHHHHH
Confidence 98887776654
No 170
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=43.68 E-value=87 Score=33.01 Aligned_cols=61 Identities=3% Similarity=0.063 Sum_probs=40.2
Q ss_pred HHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHhhcCceEEEE
Q 006354 144 ASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLIC 208 (649)
Q Consensus 144 A~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~ 208 (649)
...++.+++++||.|.+-.+ .+.....++...|+.++.++.+ ...+.+...+.. +.++|+.
T Consensus 60 ~~~l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 60 EMAALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHHHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 33445568899999887554 3445556677889988877643 345667776653 5666664
No 171
>PLN02565 cysteine synthase
Probab=43.33 E-value=2.7e+02 Score=28.64 Aligned_cols=66 Identities=6% Similarity=-0.150 Sum_probs=52.3
Q ss_pred HHHHCCC-CCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch
Q 006354 146 GLVNFGH-NVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (649)
Q Consensus 146 ~L~~~Gv-~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (649)
.+.+.|. .+|....|....+-.-+...+++...|..++.+-|...+..-...++..++++++++..
T Consensus 56 ~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 56 DAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 3444564 78866667777777777777888889999988888877888889999999999999863
No 172
>PLN02654 acetate-CoA ligase
Probab=43.17 E-value=3.6e+02 Score=30.87 Aligned_cols=70 Identities=11% Similarity=-0.000 Sum_probs=53.8
Q ss_pred CCCCCCCEEEEEccCCHH--HHHHHHHHHhcCCEEEEecC--C-CCHHHHHHHHhhcCceEEEECchhHHHHHHh
Q 006354 150 FGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYS--S-LGEDALIHSLNETQVTTLICDSKQLKKLSAV 219 (649)
Q Consensus 150 ~Gv~~gd~V~i~~~~~~~--~vva~lA~~~~G~~~vpl~~--~-~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~ 219 (649)
.+++++|++....+-+.- ....+++.+..|++++..+. . ..++++..++++.+++++.+....+..+.+.
T Consensus 312 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 386 (666)
T PLN02654 312 FDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRD 386 (666)
T ss_pred cCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhh
Confidence 488999987776665532 23456788999999987754 2 3578999999999999999999888777653
No 173
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=42.37 E-value=3e+02 Score=31.42 Aligned_cols=69 Identities=12% Similarity=0.006 Sum_probs=50.1
Q ss_pred HCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEec--CCC-CHHHHHHHHhhcCceEEEECchhHHHHH
Q 006354 149 NFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIY--SSL-GEDALIHSLNETQVTTLICDSKQLKKLS 217 (649)
Q Consensus 149 ~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~--~~~-~~~~l~~~l~~~~~~~vi~~~~~~~~l~ 217 (649)
..+++++|++....+-+..+...+++.+..|+..+..+ |.. .++++..++++.+++++.+.......+.
T Consensus 300 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~ 371 (652)
T TIGR01217 300 HCDLGPGDRLFYYTTTGWMMWNWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACR 371 (652)
T ss_pred ccCCCCCcEEEEeCCcchhhhHHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHH
Confidence 35889999988777766544334568889999988775 333 4678889999999998877665555444
No 174
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=41.26 E-value=3.1e+02 Score=31.09 Aligned_cols=101 Identities=9% Similarity=0.018 Sum_probs=66.1
Q ss_pred EEeHHHHHHHHHHHHHHHH-HCCCCCCCEEEEEccCCHH--HHHHHHHHHhcCCEEEEecC---CCCHHHHHHHHhhcCc
Q 006354 130 WQTYGEVFDRACSFASGLV-NFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYS---SLGEDALIHSLNETQV 203 (649)
Q Consensus 130 ~~TY~eL~~~~~~lA~~L~-~~Gv~~gd~V~i~~~~~~~--~vva~lA~~~~G~~~vpl~~---~~~~~~l~~~l~~~~~ 203 (649)
.+|.+.+.. .++..+. ..+++++|++....+-+.. ....+++.+..|+..+..+. ...+.++..++++.++
T Consensus 251 ~~sh~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~v 327 (628)
T TIGR02316 251 QRDVGGYAV---ALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGV 327 (628)
T ss_pred EECCcHHHH---HHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCC
Confidence 456555422 2233333 2488999988777765543 23557888999998886653 2347889999999999
Q ss_pred eEEEECchhHHHHHHhh------ccCCCccEEEEec
Q 006354 204 TTLICDSKQLKKLSAVS------SSLKTIKNVIYFE 233 (649)
Q Consensus 204 ~~vi~~~~~~~~l~~~~------~~~~~~~~ii~~~ 233 (649)
.++.+.+..+..+.+.. ..++.++.++..+
T Consensus 328 t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG 363 (628)
T TIGR02316 328 RTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAG 363 (628)
T ss_pred eEEEeCHHHHHHHHhcCCcccccCCccceeEEEEec
Confidence 99999998877665432 1234555555533
No 175
>PRK06188 acyl-CoA synthetase; Validated
Probab=40.90 E-value=2.9e+02 Score=30.24 Aligned_cols=86 Identities=13% Similarity=0.077 Sum_probs=65.7
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLIC 208 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 208 (649)
..+|++.+...+.. .....++..+|++...++-+..+...+++.+..|+..+..+ ...++.+...+++.+++++..
T Consensus 186 v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 45788887665543 33445888999999888877666666778888898887765 467889999999999999999
Q ss_pred CchhHHHHHH
Q 006354 209 DSKQLKKLSA 218 (649)
Q Consensus 209 ~~~~~~~l~~ 218 (649)
....+..+.+
T Consensus 262 ~P~~l~~l~~ 271 (524)
T PRK06188 262 VPTMIYALLD 271 (524)
T ss_pred hHHHHHHHHh
Confidence 8887766543
No 176
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=40.63 E-value=93 Score=25.47 Aligned_cols=54 Identities=9% Similarity=-0.154 Sum_probs=40.7
Q ss_pred ceEEeHHHHHHHH----HHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCE
Q 006354 128 YEWQTYGEVFDRA----CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSIT 181 (649)
Q Consensus 128 ~~~~TY~eL~~~~----~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~ 181 (649)
...+.+.++.+.. ..+...+...++.+++.|.+++.++.....+...+.+.|..
T Consensus 35 A~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 35 AINIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred cEEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 3457777775432 35666777778888999999999998877777888888874
No 177
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=40.06 E-value=2.8e+02 Score=29.87 Aligned_cols=86 Identities=19% Similarity=0.138 Sum_probs=63.4
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~-~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (649)
-.+|++.+...+... -...++.++|++...+|-... .+..+++.+..|+..+.. +...+.++...+++.++.++.
T Consensus 159 v~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 234 (483)
T PRK03640 159 VIQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLV-EKFDAEKINKLLQTGGVTIIS 234 (483)
T ss_pred EEEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEec-CCCCHHHHHHHHHHhCCcEEE
Confidence 467888876544332 233689999999998875332 234467777889987765 467889999999999999999
Q ss_pred ECchhHHHHHH
Q 006354 208 CDSKQLKKLSA 218 (649)
Q Consensus 208 ~~~~~~~~l~~ 218 (649)
..+..+..+.+
T Consensus 235 ~~P~~~~~l~~ 245 (483)
T PRK03640 235 VVSTMLQRLLE 245 (483)
T ss_pred eHHHHHHHHHh
Confidence 99988776653
No 178
>PRK07529 AMP-binding domain protein; Validated
Probab=39.70 E-value=4.5e+02 Score=29.76 Aligned_cols=101 Identities=11% Similarity=0.024 Sum_probs=67.8
Q ss_pred ceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCC-C-C---HHHHHHHHhh
Q 006354 128 YEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSS-L-G---EDALIHSLNE 200 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~-~-~---~~~l~~~l~~ 200 (649)
.-.+|++.+...+..++. ..++.++|++...+|-.- ..+..+++.+..|+.++...+. + . .+.+...+++
T Consensus 230 ~v~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~ 306 (632)
T PRK07529 230 LAQHTHGNEVANAWLGAL---LLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVER 306 (632)
T ss_pred EEEEcHHHHHHHHHHHHH---hcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHH
Confidence 346789888765544443 346789999888777442 4455678889999988876543 1 1 2467788999
Q ss_pred cCceEEEECchhHHHHHHhhc---cCCCccEEEE
Q 006354 201 TQVTTLICDSKQLKKLSAVSS---SLKTIKNVIY 231 (649)
Q Consensus 201 ~~~~~vi~~~~~~~~l~~~~~---~~~~~~~ii~ 231 (649)
.++.++++.+..+..+.+... ..+.++.+++
T Consensus 307 ~~vt~~~~~P~~~~~l~~~~~~~~~~~slr~v~~ 340 (632)
T PRK07529 307 YRINFLSGVPTVYAALLQVPVDGHDISSLRYALC 340 (632)
T ss_pred hCCeEEEeHHHHHHHHHhCcccCCCccceEEEEE
Confidence 999999998887776654321 2345555444
No 179
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=39.57 E-value=1.2e+02 Score=31.94 Aligned_cols=59 Identities=7% Similarity=0.071 Sum_probs=39.6
Q ss_pred HHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHhhcCceEEEE
Q 006354 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLIC 208 (649)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~ 208 (649)
.++..++++||.|.+-.+..+ ....++...|+.++.++.+ ..++.+...+.. +.++|+.
T Consensus 62 ~l~~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 62 AALLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HHHHhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 334457899999888665544 4455677889988877533 457788877754 5666654
No 180
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=39.31 E-value=93 Score=27.40 Aligned_cols=43 Identities=12% Similarity=-0.063 Sum_probs=34.7
Q ss_pred HHHHHHHHHCCCCCCCEEEEEccC---CHHHHHHHHHHHhcCCEEE
Q 006354 141 CSFASGLVNFGHNVDTRAAILAET---CVEWFIAFQGCFRQSITVV 183 (649)
Q Consensus 141 ~~lA~~L~~~Gv~~gd~V~i~~~~---~~~~vva~lA~~~~G~~~v 183 (649)
..++..|.++|+.+++.|.+++.. +.....+++++-.+|..=|
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 467888899999999999999975 5666777778888886644
No 181
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.04 E-value=3.1e+02 Score=30.14 Aligned_cols=85 Identities=11% Similarity=-0.018 Sum_probs=62.9
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
-.+|++.+...+..... ..++.++|++...+|-.. .++..+++.+..|+.++..+ ...++.+...+++.++.++
T Consensus 208 v~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~i~~~~~t~~ 283 (546)
T PRK08314 208 CMHTHRTVMANAVGSVL---WSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP-RWDREAAARLIERYRVTHW 283 (546)
T ss_pred EEEecHHHHHHHHHHHH---hhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC-CCCHHHHHHHHHHhcCcee
Confidence 46889888766554333 346788998887776543 34566778899999888764 5678899999999999999
Q ss_pred EECchhHHHHH
Q 006354 207 ICDSKQLKKLS 217 (649)
Q Consensus 207 i~~~~~~~~l~ 217 (649)
.........+.
T Consensus 284 ~~~p~~~~~ll 294 (546)
T PRK08314 284 TNIPTMVVDFL 294 (546)
T ss_pred cccHHHHHHHH
Confidence 98887665543
No 182
>PLN02246 4-coumarate--CoA ligase
Probab=38.52 E-value=3.2e+02 Score=30.11 Aligned_cols=88 Identities=10% Similarity=0.021 Sum_probs=62.9
Q ss_pred eEEeHHHHHHHHHHHHHHH-HHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceE
Q 006354 129 EWQTYGEVFDRACSFASGL-VNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTT 205 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L-~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 205 (649)
-.+|++.+........... ...++.++|++....|-.. .+...+++.+..|+.++..+ ...++++...++..++.+
T Consensus 197 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~ 275 (537)
T PLN02246 197 VMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMP-KFEIGALLELIQRHKVTI 275 (537)
T ss_pred EEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeC-CCCHHHHHHHHHHhCceE
Confidence 4578888876554443322 2357889999988777543 22345678889999988875 467888999999999999
Q ss_pred EEECchhHHHHH
Q 006354 206 LICDSKQLKKLS 217 (649)
Q Consensus 206 vi~~~~~~~~l~ 217 (649)
+.........+.
T Consensus 276 ~~~~p~~~~~l~ 287 (537)
T PLN02246 276 APFVPPIVLAIA 287 (537)
T ss_pred EEcchHHHHHHh
Confidence 888877665543
No 183
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=37.42 E-value=4.8e+02 Score=28.69 Aligned_cols=86 Identities=13% Similarity=-0.004 Sum_probs=63.6
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHH---HHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW---FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTT 205 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~---vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 205 (649)
..+|.+.+...+.... ...++.++|++...+|-...+ +...++++..|+..+.. +...+......+++.++.+
T Consensus 200 V~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSV---EICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PDPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHH---HhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CCCCHHHHHHHHHHhCCcE
Confidence 4678898877666543 345789999988887765432 22568888999988765 4556777888999999999
Q ss_pred EEECchhHHHHHH
Q 006354 206 LICDSKQLKKLSA 218 (649)
Q Consensus 206 vi~~~~~~~~l~~ 218 (649)
+.........+.+
T Consensus 276 ~~~~p~~~~~l~~ 288 (536)
T PRK10946 276 TALVPPAVSLWLQ 288 (536)
T ss_pred EEeChHHHHHHHh
Confidence 9998887766654
No 184
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=36.46 E-value=5.2e+02 Score=32.26 Aligned_cols=103 Identities=14% Similarity=0.025 Sum_probs=72.2
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHH-HHHHHHHHhcCCEEEEecCC--CCHHHHHHHHhhcCceE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSS--LGEDALIHSLNETQVTT 205 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~-vva~lA~~~~G~~~vpl~~~--~~~~~l~~~l~~~~~~~ 205 (649)
-.+|.+.+....... ....++.++|++....+-+.+. +..+++.+..|+..+..++. ..++.+...+++.++++
T Consensus 616 V~~~h~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~ 692 (1296)
T PRK10252 616 VMVGQTAIVNRLLWM---QNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTT 692 (1296)
T ss_pred EEeccHHHHHHHHHH---HHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeE
Confidence 457888776544333 3345899999999988877654 33467788899988876543 56889999999999999
Q ss_pred EEECchhHHHHHHhh------ccCCCccEEEEecC
Q 006354 206 LICDSKQLKKLSAVS------SSLKTIKNVIYFEN 234 (649)
Q Consensus 206 vi~~~~~~~~l~~~~------~~~~~~~~ii~~~~ 234 (649)
+...+..+..+.... ..++.++.+++-++
T Consensus 693 ~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe 727 (1296)
T PRK10252 693 THFVPSMLAAFVASLTPEGARQSCASLRQVFCSGE 727 (1296)
T ss_pred EEeCHHHHHHHHhhhccccccccCCCccEEEEecC
Confidence 999888776654431 12345666665443
No 185
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=36.40 E-value=4.2e+02 Score=29.47 Aligned_cols=88 Identities=7% Similarity=-0.081 Sum_probs=62.4
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~-vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (649)
-.+|++.+...+..+. .....++.++|++...+|-...+ +...++.+..|+..+...+...++.+...+++.++.+++
T Consensus 199 v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 199 VVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 3578888765443322 12235788999998887755432 334577788888877666677889999999999999999
Q ss_pred ECchhHHHHH
Q 006354 208 CDSKQLKKLS 217 (649)
Q Consensus 208 ~~~~~~~~l~ 217 (649)
.....+..+.
T Consensus 278 ~~P~~~~~l~ 287 (576)
T PRK05620 278 GVPTLWIQLM 287 (576)
T ss_pred ecCHHHHHHH
Confidence 8887766554
No 186
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=36.24 E-value=5e+02 Score=31.87 Aligned_cols=87 Identities=9% Similarity=-0.007 Sum_probs=64.5
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC--HHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~--~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|.+.+...+..+.. ..++.++|++...+|-. ..+....++.+..|+..+.......++.+...+++.+++++
T Consensus 800 v~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~ 876 (1146)
T PRK08633 800 VMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATIL 876 (1146)
T ss_pred EEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEE
Confidence 45788888766655433 34788899887776643 33344467778889888877666788999999999999999
Q ss_pred EECchhHHHHHH
Q 006354 207 ICDSKQLKKLSA 218 (649)
Q Consensus 207 i~~~~~~~~l~~ 218 (649)
.+.+.....+.+
T Consensus 877 ~~~P~~~~~l~~ 888 (1146)
T PRK08633 877 LGTPTFLRLYLR 888 (1146)
T ss_pred EecHHHHHHHHh
Confidence 999888776654
No 187
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=35.98 E-value=66 Score=30.18 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=28.4
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
..+||.++.+.+.++|..+.+.|.+|.-.|+|
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiai 36 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAI 36 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEE
Confidence 47999999999999999999999999955554
No 188
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=35.96 E-value=3.2e+02 Score=29.12 Aligned_cols=79 Identities=10% Similarity=0.019 Sum_probs=58.8
Q ss_pred HHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEe--cCCCCHHHHHHHHhhcCceEEEEC----chhHHHH
Q 006354 143 FASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTI--YSSLGEDALIHSLNETQVTTLICD----SKQLKKL 216 (649)
Q Consensus 143 lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl--~~~~~~~~l~~~l~~~~~~~vi~~----~~~~~~l 216 (649)
+...+.+..--+|-+|+.+++-.++..+.+..+...||-+.-. ||....+.+...|.+.+..+.-.. +++...+
T Consensus 20 ~~~~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~~~ey~~~~ 99 (406)
T TIGR00936 20 IRERFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGETNEEYYWAI 99 (406)
T ss_pred HHHHHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCCHHHHHHHH
Confidence 3334444445569999999999999999999999999976655 888889999999999999876543 3444444
Q ss_pred HHhhc
Q 006354 217 SAVSS 221 (649)
Q Consensus 217 ~~~~~ 221 (649)
.++..
T Consensus 100 ~~~l~ 104 (406)
T TIGR00936 100 EQVLD 104 (406)
T ss_pred HHHhc
Confidence 44443
No 189
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=35.61 E-value=3.2e+02 Score=29.76 Aligned_cols=86 Identities=16% Similarity=0.009 Sum_probs=63.4
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~--~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|++.+...+.... ....+++++|++...++-... +...+++.+..|+..+..++...+..+...|++.++.++
T Consensus 179 v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (508)
T TIGR02262 179 VVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIF 256 (508)
T ss_pred EEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEE
Confidence 4678888876543322 234589999998877775543 344567778899988877766778899999999999999
Q ss_pred EECchhHHHH
Q 006354 207 ICDSKQLKKL 216 (649)
Q Consensus 207 i~~~~~~~~l 216 (649)
...+..+..+
T Consensus 257 ~~~P~~~~~~ 266 (508)
T TIGR02262 257 YGVPTLYAAM 266 (508)
T ss_pred ecchHHHHHH
Confidence 9988765544
No 190
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=35.28 E-value=5.6e+02 Score=28.29 Aligned_cols=91 Identities=13% Similarity=0.050 Sum_probs=68.8
Q ss_pred ceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCC--HHHHHHHHHHHhcCCEEEEecC-CCCHHHHHHHHhhcCce
Q 006354 128 YEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYS-SLGEDALIHSLNETQVT 204 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~--~~~vva~lA~~~~G~~~vpl~~-~~~~~~l~~~l~~~~~~ 204 (649)
--.+|++.+...+..+...+... +.+.|++...+|-. .-+...+++.+..|+..+...+ .+.++.+...+...++.
T Consensus 188 gv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t 266 (534)
T COG0318 188 GVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVT 266 (534)
T ss_pred EeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcce
Confidence 34689999988866666655321 78888878888754 4667788888999999887775 68888888999888888
Q ss_pred EEEECchhHHHHHHh
Q 006354 205 TLICDSKQLKKLSAV 219 (649)
Q Consensus 205 ~vi~~~~~~~~l~~~ 219 (649)
.+.........+...
T Consensus 267 ~~~~vPt~~~~ll~~ 281 (534)
T COG0318 267 VLSGVPTFLRELLDN 281 (534)
T ss_pred EEecchHHHHHHHhC
Confidence 888877777665443
No 191
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=35.01 E-value=4.3e+02 Score=27.73 Aligned_cols=62 Identities=5% Similarity=-0.121 Sum_probs=49.1
Q ss_pred HCC-CCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECc
Q 006354 149 NFG-HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (649)
Q Consensus 149 ~~G-v~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (649)
+.| +++|....|....+-.-+...++|...|..+..+-|...+.+-...++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 67886556667777777888888899999888887776667778999999999999974
No 192
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=34.98 E-value=6.4e+02 Score=27.58 Aligned_cols=86 Identities=10% Similarity=-0.055 Sum_probs=61.9
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHH--HH-HHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW--FI-AFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTT 205 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~--vv-a~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 205 (649)
..+|.+.+...+.... ...++.++|++...+|....+ .. ..++++..|+..+.. +...+..+...+++.++.+
T Consensus 201 v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~ 276 (527)
T TIGR02275 201 IPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA-PDPSPTDCFPLIERHKVTV 276 (527)
T ss_pred eeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC-CCCCHHHHHHHHHHhCCeE
Confidence 4578888866554433 345788999998888755432 22 367888889887754 4456778888999999999
Q ss_pred EEECchhHHHHHH
Q 006354 206 LICDSKQLKKLSA 218 (649)
Q Consensus 206 vi~~~~~~~~l~~ 218 (649)
+......+..+..
T Consensus 277 ~~~~p~~~~~l~~ 289 (527)
T TIGR02275 277 TALVPPAVALWMQ 289 (527)
T ss_pred EEecHHHHHHHHh
Confidence 9999887766543
No 193
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=34.97 E-value=2.6e+02 Score=30.88 Aligned_cols=84 Identities=15% Similarity=0.132 Sum_probs=64.3
Q ss_pred EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEcc--CCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEE
Q 006354 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAE--TCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 130 ~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~--~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (649)
-+|+......+.- .....|+.+.|+|-+.+| .+...++.+-+|+..|+++| |....++.....=....+++++-
T Consensus 261 vith~r~~~~a~g---~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~Q 336 (649)
T KOG1179|consen 261 VITHLRYLQGAAG---FYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQ 336 (649)
T ss_pred HHHHHHHHHHHHH---HHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeee
Confidence 3566555443332 234459999999999998 77889999999999999887 77899999998888888998887
Q ss_pred ECchhHHHHH
Q 006354 208 CDSKQLKKLS 217 (649)
Q Consensus 208 ~~~~~~~~l~ 217 (649)
.-.+...-+.
T Consensus 337 YIGElcRYLl 346 (649)
T KOG1179|consen 337 YIGELCRYLL 346 (649)
T ss_pred hHHHHHHHHH
Confidence 6666554443
No 194
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=34.55 E-value=2e+02 Score=28.78 Aligned_cols=97 Identities=18% Similarity=0.180 Sum_probs=59.8
Q ss_pred EeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCC----CHHHHHHHHhhcCceEE
Q 006354 131 QTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSL----GEDALIHSLNETQVTTL 206 (649)
Q Consensus 131 ~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~----~~~~l~~~l~~~~~~~v 206 (649)
+-.+-+. |+..||..|++.|. .|.+++......+.. .+...|..+..++... ..+++...+++.+++++
T Consensus 12 iG~GHv~-Rcl~LA~~l~~~g~----~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v 84 (279)
T TIGR03590 12 IGLGHVM-RCLTLARALHAQGA----EVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDIL 84 (279)
T ss_pred ccccHHH-HHHHHHHHHHHCCC----EEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEE
Confidence 4455554 48889999987654 577777665554433 3467888777775432 24578888999999999
Q ss_pred EECchhH-HHHHHhhccCCCccEEEEecCCC
Q 006354 207 ICDSKQL-KKLSAVSSSLKTIKNVIYFENDG 236 (649)
Q Consensus 207 i~~~~~~-~~l~~~~~~~~~~~~ii~~~~~~ 236 (649)
|+|.-.. .......+. ....++++++..
T Consensus 85 V~D~y~~~~~~~~~~k~--~~~~l~~iDD~~ 113 (279)
T TIGR03590 85 IVDHYGLDADWEKLIKE--FGRKILVIDDLA 113 (279)
T ss_pred EEcCCCCCHHHHHHHHH--hCCeEEEEecCC
Confidence 9986321 122222211 234566666653
No 195
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=33.20 E-value=1.3e+02 Score=24.20 Aligned_cols=54 Identities=13% Similarity=-0.036 Sum_probs=35.1
Q ss_pred CCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCE
Q 006354 125 LGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSIT 181 (649)
Q Consensus 125 ~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~ 181 (649)
......+.|.++......+.. +.. ..+++.|.+++..+.....+...+.+.|..
T Consensus 29 IpgA~~ip~~~~~~~~~~~~~-~~~--~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 82 (96)
T cd01529 29 LPGKRSIPGAALVLRSQELQA-LEA--PGRATRYVLTCDGSLLARFAAQELLALGGK 82 (96)
T ss_pred CCCcEeCCHHHhcCCHHHHHH-hhc--CCCCCCEEEEeCChHHHHHHHHHHHHcCCC
Confidence 333445778777655444433 322 467888999998877776666667778863
No 196
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=32.90 E-value=19 Score=26.66 Aligned_cols=11 Identities=45% Similarity=1.126 Sum_probs=8.6
Q ss_pred CCcccceeeCc
Q 006354 556 ERGMCWFYTGD 566 (649)
Q Consensus 556 ~~~~~w~~TGD 566 (649)
.+|..||.|||
T Consensus 69 dngkhwydtgd 79 (80)
T PF05452_consen 69 DNGKHWYDTGD 79 (80)
T ss_pred cCCcccccCCC
Confidence 34557999998
No 197
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=32.90 E-value=19 Score=18.65 Aligned_cols=10 Identities=40% Similarity=0.657 Sum_probs=7.5
Q ss_pred ccCccccccc
Q 006354 476 AYGLTETCAG 485 (649)
Q Consensus 476 ~YG~TE~~~~ 485 (649)
+||+|++...
T Consensus 1 GYGSTqTA~~ 10 (16)
T PF00818_consen 1 GYGSTQTAGE 10 (16)
T ss_pred CCCcccccCC
Confidence 5999987653
No 198
>PRK07470 acyl-CoA synthetase; Validated
Probab=32.86 E-value=4.2e+02 Score=29.02 Aligned_cols=89 Identities=15% Similarity=0.057 Sum_probs=59.3
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEe-cCCCCHHHHHHHHhhcCceEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTI-YSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl-~~~~~~~~l~~~l~~~~~~~vi 207 (649)
..+|++.+...+......+. .+..++|++..++|-+..+-...+..+..|+..+.+ ....+++.+...+++.++.++.
T Consensus 181 v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 259 (528)
T PRK07470 181 AVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLF 259 (528)
T ss_pred EEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEe
Confidence 45788888544332221111 267888999888886654433334445556655544 3457889999999999999999
Q ss_pred ECchhHHHHHH
Q 006354 208 CDSKQLKKLSA 218 (649)
Q Consensus 208 ~~~~~~~~l~~ 218 (649)
.....+..+.+
T Consensus 260 ~~P~~~~~l~~ 270 (528)
T PRK07470 260 TVPTILKMLVE 270 (528)
T ss_pred chHHHHHHHHh
Confidence 99988877654
No 199
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=32.61 E-value=97 Score=24.24 Aligned_cols=42 Identities=14% Similarity=0.093 Sum_probs=35.9
Q ss_pred HHHHHHC-CCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEe
Q 006354 144 ASGLVNF-GHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTI 185 (649)
Q Consensus 144 A~~L~~~-Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl 185 (649)
..+|.+. ||+.|+.++.+.....|.+..+=|.+|+.-+-+-.
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~ 45 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELAT 45 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEe
Confidence 4567665 99999999999999999999999999998765543
No 200
>PLN02736 long-chain acyl-CoA synthetase
Probab=32.49 E-value=4.2e+02 Score=30.13 Aligned_cols=86 Identities=7% Similarity=-0.046 Sum_probs=62.0
Q ss_pred ceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 128 YEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~-vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
.-.+|++.+...+..+.. ..++.++|++..++|-.-.+ ...+++++..|+.++.... .+..+...+++.+++++
T Consensus 238 GV~lsh~~l~~~~~~~~~---~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~--~~~~~~~~i~~~~~t~~ 312 (651)
T PLN02736 238 GVVLTHGNLIANVAGSSL---STKFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQG--DNLKLMDDLAALRPTIF 312 (651)
T ss_pred EEEEecHHHHHHHHHHHh---ccCCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCC--CHHHHHHHHHHhCCcEE
Confidence 346899998777666553 34788999988888754321 2346677888988765542 56788888999999999
Q ss_pred EECchhHHHHHH
Q 006354 207 ICDSKQLKKLSA 218 (649)
Q Consensus 207 i~~~~~~~~l~~ 218 (649)
+..+..+..+.+
T Consensus 313 ~~vP~~~~~l~~ 324 (651)
T PLN02736 313 CSVPRLYNRIYD 324 (651)
T ss_pred ecchHHHHHHHH
Confidence 998887766544
No 201
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=32.18 E-value=6.3e+02 Score=26.65 Aligned_cols=118 Identities=7% Similarity=0.041 Sum_probs=71.5
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCC--CCCEEE
Q 006354 82 STMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHN--VDTRAA 159 (649)
Q Consensus 82 ~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~--~gd~V~ 159 (649)
.++.++++--.+.+-+..+++... .|.+- ..+...+|++.+...+..++..+ |+. +.|++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~T----------SGTTG----~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l 142 (386)
T TIGR02372 80 RRIGEWVDLIAHHSTPTARFTFAT----------SGSTG----TPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVI 142 (386)
T ss_pred ccHHHHHHHHHhcCCCCceEEEEC----------CCCCC----CCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEE
Confidence 466666666555654555555431 33300 12334679999988888777655 443 345677
Q ss_pred EEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHh
Q 006354 160 ILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAV 219 (649)
Q Consensus 160 i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~ 219 (649)
.++|-.. .++..++..+..|+..+... ..++..+...++.. ++++..+..+..+.+.
T Consensus 143 ~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~ 201 (386)
T TIGR02372 143 SCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQLADL 201 (386)
T ss_pred EeCCcHHHHHHHHHHHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHHHhh
Confidence 7777553 33455666778899887664 45665555555432 5777788777766553
No 202
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=32.09 E-value=3.6e+02 Score=25.90 Aligned_cols=52 Identities=13% Similarity=0.223 Sum_probs=34.5
Q ss_pred EEecCCCCHHHHHHHHhhcCceEEEEC----------chhHHHHHHhhccCCCc-cEEEEecC
Q 006354 183 VTIYSSLGEDALIHSLNETQVTTLICD----------SKQLKKLSAVSSSLKTI-KNVIYFEN 234 (649)
Q Consensus 183 vpl~~~~~~~~l~~~l~~~~~~~vi~~----------~~~~~~l~~~~~~~~~~-~~ii~~~~ 234 (649)
+.++|..|.+.+.++|.+...-++.+- ++..+++.++......- ...|-+++
T Consensus 114 v~lnP~Tp~~~i~~~l~~vD~VllMsVnPGfgGQ~Fi~~~l~Ki~~lr~~~~~~~~~~IeVDG 176 (220)
T COG0036 114 LVLNPATPLEALEPVLDDVDLVLLMSVNPGFGGQKFIPEVLEKIRELRAMIDERLDILIEVDG 176 (220)
T ss_pred EEECCCCCHHHHHHHHhhCCEEEEEeECCCCcccccCHHHHHHHHHHHHHhcccCCeEEEEeC
Confidence 678999999999999999888777763 24555665554433321 34454544
No 203
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=31.75 E-value=3.7e+02 Score=27.07 Aligned_cols=65 Identities=3% Similarity=-0.123 Sum_probs=47.0
Q ss_pred HHHHCC-CCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch
Q 006354 146 GLVNFG-HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (649)
Q Consensus 146 ~L~~~G-v~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (649)
...+.| +.+|++| +....+-.-....+++.+.|..+..+-|...+......++..++++++++..
T Consensus 47 ~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 47 DAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 344456 4777776 5555565666666677789998887777665555678889999999999865
No 204
>PRK13388 acyl-CoA synthetase; Provisional
Probab=31.75 E-value=7e+02 Score=27.45 Aligned_cols=85 Identities=9% Similarity=0.058 Sum_probs=58.3
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~--~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|++.+...+..+. ...++.++|++..+++-... ++..+++.+..|+..+. .+...+.++...+++.++.++
T Consensus 168 v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~vt~~ 243 (540)
T PRK13388 168 VRCSHGRLAFAGRALT---ERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVAL-PAKFSASGFLDDVRRYGATYF 243 (540)
T ss_pred EEecHHHHHHHHHHHH---HHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEE-CCCCCHHHHHHHHHHhCCeEE
Confidence 4578888866555443 34478999998887775432 23334556777877664 456778889999999999998
Q ss_pred EECchhHHHHH
Q 006354 207 ICDSKQLKKLS 217 (649)
Q Consensus 207 i~~~~~~~~l~ 217 (649)
.........+.
T Consensus 244 ~~~p~~l~~l~ 254 (540)
T PRK13388 244 NYVGKPLAYIL 254 (540)
T ss_pred EehHHHHHHHH
Confidence 77666554443
No 205
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=31.71 E-value=7.2e+02 Score=27.23 Aligned_cols=85 Identities=13% Similarity=0.077 Sum_probs=61.7
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|++.+...+.... ...+++.+|++...+|-.. .++..++..+..|+..+. .+.+.++.+...+++.++.++
T Consensus 213 v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~-~~~~~~~~~~~~l~~~~vt~~ 288 (538)
T TIGR03208 213 VMHTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVL-QDIWNPARAAELIRETGVTFT 288 (538)
T ss_pred EEeehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEe-cCccCHHHHHHHHHHhCCeEE
Confidence 3578877766544333 3447888999988888654 345566777888887664 456788999999999999999
Q ss_pred EECchhHHHHH
Q 006354 207 ICDSKQLKKLS 217 (649)
Q Consensus 207 i~~~~~~~~l~ 217 (649)
.........+.
T Consensus 289 ~~~p~~~~~l~ 299 (538)
T TIGR03208 289 MASTPFLTDLC 299 (538)
T ss_pred ecCHHHHHHHH
Confidence 88877766554
No 206
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=31.70 E-value=31 Score=26.35 Aligned_cols=22 Identities=14% Similarity=0.170 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHCCCCCCCEEEE
Q 006354 139 RACSFASGLVNFGHNVDTRAAI 160 (649)
Q Consensus 139 ~~~~lA~~L~~~Gv~~gd~V~i 160 (649)
+...+-..|+++|++.||.|-|
T Consensus 41 ~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 41 KKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHTTHHHHHHTTT--TT-EEEE
T ss_pred HHCCHHHHHHHcCCCCCCEEEE
Confidence 3445566788889999999977
No 207
>PRK07787 acyl-CoA synthetase; Validated
Probab=31.59 E-value=5.9e+02 Score=27.31 Aligned_cols=85 Identities=11% Similarity=0.000 Sum_probs=62.9
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccC--CHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAET--CVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~--~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
-.+|++.+...+..++.. .++.++|++...++- ...++..+++.+..|+.++..+ ...++.+...++ .++..+
T Consensus 146 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~ 220 (471)
T PRK07787 146 VVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLY 220 (471)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEE
Confidence 467998887766555443 467889988766653 2345667889999999888664 467889999999 899998
Q ss_pred EECchhHHHHHH
Q 006354 207 ICDSKQLKKLSA 218 (649)
Q Consensus 207 i~~~~~~~~l~~ 218 (649)
...+..+..+.+
T Consensus 221 ~~~P~~~~~l~~ 232 (471)
T PRK07787 221 FGVPTVWSRIAA 232 (471)
T ss_pred EcchHHHHHHHh
Confidence 888877766553
No 208
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=31.49 E-value=5.3e+02 Score=32.56 Aligned_cols=103 Identities=9% Similarity=-0.001 Sum_probs=70.6
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH-HHHHHHHHHhcCCEEEEecCC--CCHHHHHHHHhhcCceE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSS--LGEDALIHSLNETQVTT 205 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~-~vva~lA~~~~G~~~vpl~~~--~~~~~l~~~l~~~~~~~ 205 (649)
-.+|.+.+...+..++. ..++.++|++..+++-+.+ .+..+++.+..|+..+..... ..+..+...+++.++++
T Consensus 433 V~~sh~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~ 509 (1389)
T TIGR03443 433 VLGRHFSLAYYFPWMAK---RFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATV 509 (1389)
T ss_pred EEeccHHHHHHHHHHHH---hcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeE
Confidence 45788887665544333 4478899998877765432 234577888899987765433 35778999999999999
Q ss_pred EEECchhHHHHHHh-hccCCCccEEEEecC
Q 006354 206 LICDSKQLKKLSAV-SSSLKTIKNVIYFEN 234 (649)
Q Consensus 206 vi~~~~~~~~l~~~-~~~~~~~~~ii~~~~ 234 (649)
+...+.....+... ...++.++.++..++
T Consensus 510 ~~~~Ps~~~~l~~~~~~~~~~lr~~~~gGe 539 (1389)
T TIGR03443 510 THLTPAMGQLLSAQATTPIPSLHHAFFVGD 539 (1389)
T ss_pred EEeCHHHHHHHHhcccccCCCccEEEEecc
Confidence 99988877666432 234566777666544
No 209
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=31.27 E-value=5.5e+02 Score=28.71 Aligned_cols=86 Identities=7% Similarity=-0.022 Sum_probs=61.9
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~--~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|.+.+...+..+... .++.++|++...+|-... ++..+++.+..|+..+. .+...+..+...++..++.++
T Consensus 217 V~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~ 292 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKFSASRFWDDVRRYRATAF 292 (600)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCCCHHHHHHHHHHhcceEE
Confidence 468999887766655443 578999999888876543 34455666777776664 556778888889999999998
Q ss_pred EECchhHHHHHH
Q 006354 207 ICDSKQLKKLSA 218 (649)
Q Consensus 207 i~~~~~~~~l~~ 218 (649)
.........+..
T Consensus 293 ~~~p~l~~~l~~ 304 (600)
T PRK08279 293 QYIGELCRYLLN 304 (600)
T ss_pred eehHHHHHHHHh
Confidence 877766555443
No 210
>PRK11761 cysM cysteine synthase B; Provisional
Probab=31.24 E-value=3.7e+02 Score=27.14 Aligned_cols=66 Identities=5% Similarity=-0.143 Sum_probs=48.5
Q ss_pred HHHHHHCC-CCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECc
Q 006354 144 ASGLVNFG-HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (649)
Q Consensus 144 A~~L~~~G-v~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (649)
...+.+.| +.+|+.|.. ...+-.-....++|.+.|..+..+-|...+......++..++++++++.
T Consensus 51 ~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 51 IVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 33344555 567776544 5666666777778888998888777776666777888999999999986
No 211
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=30.73 E-value=6.1e+02 Score=27.37 Aligned_cols=87 Identities=8% Similarity=-0.017 Sum_probs=63.5
Q ss_pred ceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH-HHHHHHHHHHhcCCEEEEecCC--CCHHHHHHHHhhcCce
Q 006354 128 YEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV-EWFIAFQGCFRQSITVVTIYSS--LGEDALIHSLNETQVT 204 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~-~~vva~lA~~~~G~~~vpl~~~--~~~~~l~~~l~~~~~~ 204 (649)
.-.+|++.+...+..+.. ..++..++++....|.+. ..+..+++++..|+..+..++. ..+..+...+...++.
T Consensus 158 ~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~ 234 (502)
T TIGR01734 158 GVQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLN 234 (502)
T ss_pred EEEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCe
Confidence 346889888765554333 357888888887776553 2355678899999999887654 4567888889999999
Q ss_pred EEEECchhHHHHH
Q 006354 205 TLICDSKQLKKLS 217 (649)
Q Consensus 205 ~vi~~~~~~~~l~ 217 (649)
.+...+...+.+.
T Consensus 235 ~~~~~p~~~~~~l 247 (502)
T TIGR01734 235 VWVSTPSFVDMCL 247 (502)
T ss_pred EEEEChhHHHHHH
Confidence 9999887765543
No 212
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=30.29 E-value=86 Score=31.46 Aligned_cols=56 Identities=9% Similarity=-0.018 Sum_probs=45.0
Q ss_pred ceEEeHHHHHHH-----HHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEE
Q 006354 128 YEWQTYGEVFDR-----ACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVV 183 (649)
Q Consensus 128 ~~~~TY~eL~~~-----~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~v 183 (649)
...+.|.++.+. ...+...|.+.|+.+++.|.++|.++...-.+++++..+|..-+
T Consensus 199 A~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~~v 259 (281)
T PRK11493 199 ALNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVPNV 259 (281)
T ss_pred cCCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCc
Confidence 345778887642 46677778888999999999999999999999999989998533
No 213
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=29.40 E-value=5.7e+02 Score=25.32 Aligned_cols=67 Identities=9% Similarity=0.070 Sum_probs=40.8
Q ss_pred EeHHHHH-HH-HHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEe-cCCCCHHHHHHHHhhcC
Q 006354 131 QTYGEVF-DR-ACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTI-YSSLGEDALIHSLNETQ 202 (649)
Q Consensus 131 ~TY~eL~-~~-~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl-~~~~~~~~l~~~l~~~~ 202 (649)
+||.... +. .+++...+.+.|+ =+++.|.-+ +.--..-+|.+.|...+++ .|+.+.+++..+.+.+.
T Consensus 93 m~Y~N~i~~~G~e~F~~~~~~aGv-----dGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~a~ 164 (259)
T PF00290_consen 93 MTYYNPIFQYGIERFFKEAKEAGV-----DGLIIPDLPPEESEELREAAKKHGLDLIPLVAPTTPEERIKKIAKQAS 164 (259)
T ss_dssp EE-HHHHHHH-HHHHHHHHHHHTE-----EEEEETTSBGGGHHHHHHHHHHTT-EEEEEEETTS-HHHHHHHHHH-S
T ss_pred EeeccHHhccchHHHHHHHHHcCC-----CEEEEcCCChHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCC
Confidence 7886653 33 6788888888776 345555432 3333344567788777755 67788888888877654
No 214
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=29.40 E-value=2.6e+02 Score=29.25 Aligned_cols=65 Identities=14% Similarity=0.085 Sum_probs=43.0
Q ss_pred HHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHhh---cCceEEEE
Q 006354 141 CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNE---TQVTTLIC 208 (649)
Q Consensus 141 ~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~---~~~~~vi~ 208 (649)
..+...+..+++++||.|.+-.+.. .....++...|+.++.++.+ ...+.+...+++ -+.++|+.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 4455556666889999987776543 44456677889887766542 467888888863 35566653
No 215
>PLN03013 cysteine synthase
Probab=29.20 E-value=4e+02 Score=28.63 Aligned_cols=65 Identities=5% Similarity=-0.143 Sum_probs=51.5
Q ss_pred HHHCC-CCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch
Q 006354 147 LVNFG-HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (649)
Q Consensus 147 L~~~G-v~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (649)
+.+.| +++|....|....+-.-+...++|...|..++.+-|...+.+....++..++++++++..
T Consensus 165 a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 33455 578866667777787788888888889988887777777777788899999999999754
No 216
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=29.18 E-value=9.5e+02 Score=29.50 Aligned_cols=87 Identities=9% Similarity=-0.007 Sum_probs=63.2
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
-.+|.+.+...+...+. ..++.++|++...+|-.. .+...++..+..|+..+..+.....+.+...+++.+++.+
T Consensus 811 v~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~ 887 (1140)
T PRK06814 811 VVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATIL 887 (1140)
T ss_pred EEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEE
Confidence 45788888766665544 347889999988877532 3345667778889888876555556777788899999999
Q ss_pred EECchhHHHHHH
Q 006354 207 ICDSKQLKKLSA 218 (649)
Q Consensus 207 i~~~~~~~~l~~ 218 (649)
...+.....+.+
T Consensus 888 ~~~p~~l~~l~~ 899 (1140)
T PRK06814 888 FGTDTFLNGYAR 899 (1140)
T ss_pred EecHHHHHHHHh
Confidence 988877665544
No 217
>PRK13383 acyl-CoA synthetase; Provisional
Probab=28.72 E-value=4.9e+02 Score=28.39 Aligned_cols=72 Identities=10% Similarity=-0.013 Sum_probs=53.8
Q ss_pred HHHHCCCCCCCEEEEEccCCHH-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHH
Q 006354 146 GLVNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSA 218 (649)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~~~~~-~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~ 218 (649)
.+...++.++|++...+|-... .....++.+..|+.+++. +...++.+...++..++..+.+.......+.+
T Consensus 208 ~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 280 (516)
T PRK13383 208 ILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTH-RHFDAEAALAQASLHRADAFTAVPVVLARILE 280 (516)
T ss_pred HHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEEC-CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHh
Confidence 4455688999999888774322 234456667789888765 45778888899999999999999888776654
No 218
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=28.70 E-value=2.4e+02 Score=29.67 Aligned_cols=63 Identities=13% Similarity=0.186 Sum_probs=41.1
Q ss_pred HHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHhhcCceEEE
Q 006354 141 CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 141 ~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi 207 (649)
..+...|..+++++||.|.+-.+. +.....++...|+.++.++.+ ...+.+...+.. +.++|+
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 344455666788999988765543 344445667789888877542 356778777754 556665
No 219
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=28.58 E-value=43 Score=25.55 Aligned_cols=20 Identities=15% Similarity=0.081 Sum_probs=15.8
Q ss_pred HHHHHHHHCCCCCCCEEEEE
Q 006354 142 SFASGLVNFGHNVDTRAAIL 161 (649)
Q Consensus 142 ~lA~~L~~~Gv~~gd~V~i~ 161 (649)
.+-..|+++|+++||.|-|.
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 44 GVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred CHHHHHHHcCCCCCCEEEEc
Confidence 34557788899999999875
No 220
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=28.24 E-value=4.5e+02 Score=26.48 Aligned_cols=64 Identities=6% Similarity=-0.097 Sum_probs=46.9
Q ss_pred HHHCC-CCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch
Q 006354 147 LVNFG-HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (649)
Q Consensus 147 L~~~G-v~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (649)
+.+.| +.+|+.| +....+-.-....+++.+.|..+..+-|...+..-...++..++++++++..
T Consensus 49 a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 49 AEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 44445 4777766 4566666666667777889988887777765566667899999999999764
No 221
>PLN02614 long-chain acyl-CoA synthetase
Probab=28.17 E-value=5.5e+02 Score=29.39 Aligned_cols=88 Identities=9% Similarity=-0.025 Sum_probs=62.8
Q ss_pred ceEEeHHHHHHHHHHHHHHHHH--CCCCCCCEEEEEccCC--HHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCc
Q 006354 128 YEWQTYGEVFDRACSFASGLVN--FGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQV 203 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~~--~Gv~~gd~V~i~~~~~--~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~ 203 (649)
.--+|++.+...+..+...+.. .++.++|++..++|-+ .+.. ..+.++..|+.++... ..++.+...++..++
T Consensus 240 GV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~ 316 (666)
T PLN02614 240 GVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGFWR--GDVKLLIEDLGELKP 316 (666)
T ss_pred EEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCC
Confidence 3468999887766655444321 3678899998888855 3443 3455677888876543 367888999999999
Q ss_pred eEEEECchhHHHHHH
Q 006354 204 TTLICDSKQLKKLSA 218 (649)
Q Consensus 204 ~~vi~~~~~~~~l~~ 218 (649)
++++.-+..+..+..
T Consensus 317 T~~~~vP~~~~~l~~ 331 (666)
T PLN02614 317 TIFCAVPRVLDRVYS 331 (666)
T ss_pred eEEEecHHHHHHHHH
Confidence 999999888776653
No 222
>PRK06381 threonine synthase; Validated
Probab=27.54 E-value=2.5e+02 Score=28.71 Aligned_cols=56 Identities=5% Similarity=-0.098 Sum_probs=42.9
Q ss_pred EEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHH
Q 006354 159 AILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLK 214 (649)
Q Consensus 159 ~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 214 (649)
.+....+-.-+...++|...|..+..+-|...+......++..+++++++.....+
T Consensus 66 lv~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~~~ 121 (319)
T PRK06381 66 ITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKYEE 121 (319)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCHHH
Confidence 34566777778888888999988887766666566667899999999999875433
No 223
>PRK06060 acyl-CoA synthetase; Validated
Probab=27.45 E-value=7.7e+02 Score=28.33 Aligned_cols=104 Identities=6% Similarity=-0.058 Sum_probs=68.5
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
-.+|++.+...+..+.. ...++.++|++....+-.. .+...++..+..|+..+..+....++.+...+++.++.++
T Consensus 163 V~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 240 (705)
T PRK06060 163 AIHRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVL 240 (705)
T ss_pred EEEccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEE
Confidence 35788777665544322 2356788888776665432 2234456778889888876656778888888999999999
Q ss_pred EECchhHHHHHHhh--ccCCCccEEEEecC
Q 006354 207 ICDSKQLKKLSAVS--SSLKTIKNVIYFEN 234 (649)
Q Consensus 207 i~~~~~~~~l~~~~--~~~~~~~~ii~~~~ 234 (649)
.+....+..+.... ..++.++.++..++
T Consensus 241 ~~~P~~l~~l~~~~~~~~~~slr~i~~gGe 270 (705)
T PRK06060 241 YGVPNFFARVIDSCSPDSFRSLRCVVSAGE 270 (705)
T ss_pred eeHHHHHHHHHHhcccccccceeEEEEecC
Confidence 98888776665432 23345666655443
No 224
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=26.90 E-value=2.2e+02 Score=30.71 Aligned_cols=56 Identities=5% Similarity=0.048 Sum_probs=37.5
Q ss_pred CCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHhhcCceEEEEC
Q 006354 150 FGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSS-----LGEDALIHSLNETQVTTLICD 209 (649)
Q Consensus 150 ~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 209 (649)
.++++||.|.+-.+.. .....++...|+.+++++.+ ...+.+...+.. +.++|++.
T Consensus 106 ~~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 4889999988765544 44456667789988777543 356777777753 55666653
No 225
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=26.44 E-value=1.2e+02 Score=18.26 Aligned_cols=18 Identities=28% Similarity=0.372 Sum_probs=15.0
Q ss_pred EccCCeEEEEecCCCeEE
Q 006354 570 VYPDGCLEIIDRKKDIVK 587 (649)
Q Consensus 570 ~~~dG~l~i~GR~dd~ik 587 (649)
++++|.|++.++....|+
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 448999999999888776
No 226
>PRK09274 peptide synthase; Provisional
Probab=26.13 E-value=8.1e+02 Score=26.94 Aligned_cols=95 Identities=17% Similarity=0.132 Sum_probs=61.5
Q ss_pred ceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecC------CCCHHHHHHHHhhc
Q 006354 128 YEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYS------SLGEDALIHSLNET 201 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~------~~~~~~l~~~l~~~ 201 (649)
...+|++.+...+..+.. ..++.++|++..++|-. .+++. ..|+..+.... ...++++...+++.
T Consensus 191 ~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~-----~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 261 (552)
T PRK09274 191 GVVYTHGMFEAQIEALRE---DYGIEPGEIDLPTFPLF-----ALFGP-ALGMTSVIPDMDPTRPATVDPAKLFAAIERY 261 (552)
T ss_pred eEEecHHHHHHHHHHHHH---HhCCCCCceeeeccCHH-----Hhhhh-hhCCeEEecCcccccccccCHHHHHHHHHHc
Confidence 346899998776665543 34788999876665521 22332 34665554321 34578999999999
Q ss_pred CceEEEECchhHHHHHHhhc----cCCCccEEEE
Q 006354 202 QVTTLICDSKQLKKLSAVSS----SLKTIKNVIY 231 (649)
Q Consensus 202 ~~~~vi~~~~~~~~l~~~~~----~~~~~~~ii~ 231 (649)
+++.+++....+..+.+... .++.++.++.
T Consensus 262 ~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~ 295 (552)
T PRK09274 262 GVTNLFGSPALLERLGRYGEANGIKLPSLRRVIS 295 (552)
T ss_pred CCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEe
Confidence 99999999988877765432 3445555554
No 227
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=25.96 E-value=2.6e+02 Score=31.89 Aligned_cols=92 Identities=15% Similarity=0.145 Sum_probs=60.5
Q ss_pred CCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC--CCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCc-
Q 006354 274 QNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI--PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGST- 350 (649)
Q Consensus 274 ~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~- 350 (649)
++.+|++. -+...+ ....+|.+.+...+..+...+ .++.++|++..++|..- -.+..+++++..|+..+..++
T Consensus 75 ~~~~A~~~-~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~-e~~~~~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 75 RDQDALIY-ECPYLK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTL-EPLIAMLSCARIGATHCVLFDG 150 (647)
T ss_pred CCceEEEE-EcCCCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCcEEEeeCCC
Confidence 45666654 322111 246799999877776665543 38999999999998664 223346778889988877333
Q ss_pred ---ccccccchhhccCccccceeecceEEEech
Q 006354 351 ---LTMTDTSSKIKKGTKGDVSVLKPTLMAAVP 380 (649)
Q Consensus 351 ---~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P 380 (649)
..+... +++.+++++++..
T Consensus 151 ~~~~~l~~~-----------l~~~~~~~li~~~ 172 (647)
T PTZ00237 151 YSVKSLIDR-----------IETITPKLIITTN 172 (647)
T ss_pred CCHHHHHHH-----------HHhcCCCEEEEcc
Confidence 333333 7788888888754
No 228
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=25.96 E-value=1.3e+02 Score=30.89 Aligned_cols=57 Identities=19% Similarity=0.170 Sum_probs=45.4
Q ss_pred eEEeHHHHHHH------HHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEe
Q 006354 129 EWQTYGEVFDR------ACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTI 185 (649)
Q Consensus 129 ~~~TY~eL~~~------~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl 185 (649)
..+.|.++.+. ...+...+.++|+.+++.|.++|..+.....+++++..+|..-|-+
T Consensus 237 vnip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v~~ 299 (320)
T PLN02723 237 KCVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDVPV 299 (320)
T ss_pred cccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCeeE
Confidence 45777776543 4667777888999999999999999999988999999999754434
No 229
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=25.75 E-value=1.4e+02 Score=24.89 Aligned_cols=41 Identities=7% Similarity=0.003 Sum_probs=33.2
Q ss_pred HHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCE
Q 006354 141 CSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSIT 181 (649)
Q Consensus 141 ~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~ 181 (649)
..+...+...|+.+++.|.+++.++.....+...+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45566677889999999999999988777777778888874
No 230
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=25.41 E-value=9.5e+02 Score=26.98 Aligned_cols=70 Identities=11% Similarity=0.053 Sum_probs=52.5
Q ss_pred CCCCCCCEEEEEccCCHH--HHHHHHHHHhcCCEEEEecC--C-CCHHHHHHHHhhcCceEEEECchhHHHHHHh
Q 006354 150 FGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYS--S-LGEDALIHSLNETQVTTLICDSKQLKKLSAV 219 (649)
Q Consensus 150 ~Gv~~gd~V~i~~~~~~~--~vva~lA~~~~G~~~vpl~~--~-~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~ 219 (649)
.+++++|++....+-+.- ....+++.+..|+..+..+. . ..+.++...+++.+++++.+.+..+..+.+.
T Consensus 273 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 347 (625)
T TIGR02188 273 FDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRL 347 (625)
T ss_pred cCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhc
Confidence 378899988766654432 23457888999998887643 2 3578999999999999999999887776553
No 231
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.48 E-value=9.6e+02 Score=26.28 Aligned_cols=85 Identities=9% Similarity=-0.049 Sum_probs=57.6
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCC-CEEEEEccCC--HHHHHHHHHHHhcCCEEEEecCC---CCHHHHHHHHhhcC
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVD-TRAAILAETC--VEWFIAFQGCFRQSITVVTIYSS---LGEDALIHSLNETQ 202 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~g-d~V~i~~~~~--~~~vva~lA~~~~G~~~vpl~~~---~~~~~l~~~l~~~~ 202 (649)
..+|++.+...+..+. ...++.++ |++..++|.. ..++..+++.+..|+..+.+.+. ..+..+..++++.+
T Consensus 170 v~~s~~~~~~~~~~~~---~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~ 246 (545)
T PRK07768 170 VQITHGNLYANAEAMF---VAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYR 246 (545)
T ss_pred EEEcHHHHHHHHHHHH---HhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhC
Confidence 4688988876554443 33467776 7887777644 45555667778889988877653 25667788899999
Q ss_pred ceEEEECchhHHHH
Q 006354 203 VTTLICDSKQLKKL 216 (649)
Q Consensus 203 ~~~vi~~~~~~~~l 216 (649)
++++.+.......+
T Consensus 247 ~~~~~~~~~~~~~l 260 (545)
T PRK07768 247 GTMTAAPNFAYALL 260 (545)
T ss_pred CEEEECchHHHHHH
Confidence 99876655444433
No 232
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=24.41 E-value=9.9e+02 Score=26.85 Aligned_cols=69 Identities=6% Similarity=0.040 Sum_probs=51.8
Q ss_pred CCCCCCCEEEEEccCCHH--HHHHHHHHHhcCCEEEEecC---CCCHHHHHHHHhhcCceEEEECchhHHHHHH
Q 006354 150 FGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYS---SLGEDALIHSLNETQVTTLICDSKQLKKLSA 218 (649)
Q Consensus 150 ~Gv~~gd~V~i~~~~~~~--~vva~lA~~~~G~~~vpl~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~ 218 (649)
.+++++|++....+-+.. ....+++.+..|+..+..+. ...+..+..++++.+++++.+.+..+..+.+
T Consensus 270 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 343 (629)
T PRK10524 270 FGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKK 343 (629)
T ss_pred cCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHh
Confidence 478999988776665432 24567888899998886642 2347788899999999999999988776654
No 233
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=24.05 E-value=3.5e+02 Score=29.11 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=14.7
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHhhcCceEEEE
Q 006354 176 FRQSITVVTIYSSLGEDALIHSLNETQVTTLIC 208 (649)
Q Consensus 176 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 208 (649)
.+.|+.+..++....++.++..++. +.++|++
T Consensus 122 ~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~ 153 (432)
T PRK06702 122 RKLGIDVTFFNPNLTADEIVALAND-KTKLVYA 153 (432)
T ss_pred HHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEE
Confidence 4455555555544444445444433 3344443
No 234
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=23.81 E-value=4.3e+02 Score=27.37 Aligned_cols=61 Identities=11% Similarity=-0.004 Sum_probs=46.4
Q ss_pred HHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECc
Q 006354 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (649)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (649)
.|++.+++||++|+|..--+.-.+...+|-..- +-++.++-+.... ...++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~~K~---e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSEEKL---ELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCChHHH---HHHHHhCCcEEEEcC
Confidence 456678999999999998899999888887554 8888786554333 345567888888865
No 235
>PLN00011 cysteine synthase
Probab=23.78 E-value=6.2e+02 Score=25.91 Aligned_cols=64 Identities=9% Similarity=-0.135 Sum_probs=47.7
Q ss_pred HHHCC-CCCC-CEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch
Q 006354 147 LVNFG-HNVD-TRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (649)
Q Consensus 147 L~~~G-v~~g-d~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (649)
..+.| +.+| +.|. ....+-.-....+++...|..+..+-|...+......++..++.+++++..
T Consensus 59 a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 59 AEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33444 6777 5554 566677777777888889998887777666667778899999999999853
No 236
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=23.60 E-value=8.7e+02 Score=26.34 Aligned_cols=85 Identities=12% Similarity=-0.033 Sum_probs=60.2
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
-.+|++.+...+.. . .....+.+++++..++|... -....+++++..|+.++..+ ...++.+...+++.++.++
T Consensus 191 v~~t~~~l~~~~~~-~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 266 (517)
T PRK08008 191 VVITHYNLRFAGYY-S--AWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLE-KYSARAFWGQVCKYRATIT 266 (517)
T ss_pred EEEehHHHHHHHHH-H--hhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEcc-ccCHHHHHHHHHHcCCcEE
Confidence 46889888643211 1 12235788999988877543 34556788888998887665 5678888889999999999
Q ss_pred EECchhHHHHH
Q 006354 207 ICDSKQLKKLS 217 (649)
Q Consensus 207 i~~~~~~~~l~ 217 (649)
...+.....+.
T Consensus 267 ~~~P~~~~~l~ 277 (517)
T PRK08008 267 ECIPMMIRTLM 277 (517)
T ss_pred echHHHHHHHH
Confidence 88887665544
No 237
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=23.59 E-value=5.3e+02 Score=26.46 Aligned_cols=78 Identities=9% Similarity=0.020 Sum_probs=58.9
Q ss_pred HHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHHhhccCCC
Q 006354 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSAVSSSLKT 225 (649)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~~~~~~~ 225 (649)
.|.+.|++||.+|+|..--+.-.+...+|..+ |.-++-++... ..-+..++..++...+...+..+.+..+...+..
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg 249 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDG 249 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcC
Confidence 46678999999999999999999999998876 66666676543 2334567888999999887776777666655544
Q ss_pred c
Q 006354 226 I 226 (649)
Q Consensus 226 ~ 226 (649)
+
T Consensus 250 ~ 250 (360)
T KOG0023|consen 250 G 250 (360)
T ss_pred c
Confidence 3
No 238
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=23.51 E-value=90 Score=30.29 Aligned_cols=20 Identities=25% Similarity=0.308 Sum_probs=12.9
Q ss_pred CCCCccEEEEcc-cccccccc
Q 006354 523 KPMPRGEIVVGG-FNVTAGYF 542 (649)
Q Consensus 523 ~~g~~GEl~v~g-~~v~~gY~ 542 (649)
.||.++|||++- |.-..||+
T Consensus 171 ~PgiiaELC~SDDP~YtTGYV 191 (239)
T PF03744_consen 171 APGIIAELCWSDDPDYTTGYV 191 (239)
T ss_pred CCcceEEEEecCCCCCceEEE
Confidence 367899999864 34444444
No 239
>PRK06839 acyl-CoA synthetase; Validated
Probab=23.47 E-value=9.3e+02 Score=25.80 Aligned_cols=86 Identities=9% Similarity=0.009 Sum_probs=60.9
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHH--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTL 206 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~--~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 206 (649)
..+|++.+...+.. .....++.++|++..++|-... .....++.+..|+..+. .+...++++...+++.+++++
T Consensus 167 v~~s~~~l~~~~~~---~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~-~~~~~~~~~~~~i~~~~~t~~ 242 (496)
T PRK06839 167 AVLTQENMFWNALN---NTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIV-PRKFEPTKALSMIEKHKVTVV 242 (496)
T ss_pred EEEEhHHHHHHHHH---HHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEE-ccCCCHHHHHHHHHhhCCeEE
Confidence 45788887543332 2345588999999888775432 23344677888887654 456778889999999999999
Q ss_pred EECchhHHHHHH
Q 006354 207 ICDSKQLKKLSA 218 (649)
Q Consensus 207 i~~~~~~~~l~~ 218 (649)
...+..+..+..
T Consensus 243 ~~~P~~~~~l~~ 254 (496)
T PRK06839 243 MGVPTIHQALIN 254 (496)
T ss_pred EehHHHHHHHHh
Confidence 998887776654
No 240
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=23.41 E-value=1.1e+03 Score=26.63 Aligned_cols=70 Identities=10% Similarity=0.042 Sum_probs=51.9
Q ss_pred CCCCCCCEEEEEccCCHH--HHHHHHHHHhcCCEEEEecC--C-CCHHHHHHHHhhcCceEEEECchhHHHHHHh
Q 006354 150 FGHNVDTRAAILAETCVE--WFIAFQGCFRQSITVVTIYS--S-LGEDALIHSLNETQVTTLICDSKQLKKLSAV 219 (649)
Q Consensus 150 ~Gv~~gd~V~i~~~~~~~--~vva~lA~~~~G~~~vpl~~--~-~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~~ 219 (649)
.+++++|++....+-+.. ....+++.+..|+..+..+. . ..++++..++++.++.++.+....+..+.+.
T Consensus 282 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 356 (637)
T PRK00174 282 FDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKE 356 (637)
T ss_pred cCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhc
Confidence 478889987666654432 23457888999998887642 2 3578899999999999999998887766543
No 241
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=23.16 E-value=5.2e+02 Score=28.03 Aligned_cols=69 Identities=16% Similarity=0.207 Sum_probs=48.6
Q ss_pred CCHHHHHHHHHHhC-----CCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCC
Q 006354 82 STMAALFEQSCKSH-----PQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVNFGHNVDT 156 (649)
Q Consensus 82 ~tl~~~~~~~a~~~-----p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd 156 (649)
.++.+.+++..+.+ -+..|+.. .|. ...+|+++.+.++.++..+.+. +.++.
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal------------~g~----------~~~~f~~iq~lA~~i~~~~~~~-~~~~~ 409 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALAL------------PGK----------PNPSFAEIQELAEAIAEGMAEL-INPDQ 409 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEe------------CCC----------CCCCHHHHHHHHHHHHHHHHhh-ccCCC
Confidence 46777777776653 33445544 343 2589999999999999999876 67787
Q ss_pred EEEEEccCCHHHHHHHH
Q 006354 157 RAAILAETCVEWFIAFQ 173 (649)
Q Consensus 157 ~V~i~~~~~~~~vva~l 173 (649)
.+.|++++...=+.-+.
T Consensus 410 Plivv~e~D~aKvLGq~ 426 (473)
T PF06277_consen 410 PLIVVVEQDMAKVLGQT 426 (473)
T ss_pred CEEEEECchHHHHHHHH
Confidence 88888887765554443
No 242
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=22.88 E-value=2.2e+02 Score=31.69 Aligned_cols=90 Identities=13% Similarity=0.152 Sum_probs=64.7
Q ss_pred eEEechHHHHHHHHHHHhhCC----CCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEeCCcccccccchhhccCcccc
Q 006354 292 GVMITHGNIVATAAAIKTLIP----NPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGYGSTLTMTDTSSKIKKGTKGD 367 (649)
Q Consensus 292 gV~~th~~l~~~~~~~~~~~~----~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~~~~~~l~~~~~~~~~~~~~~ 367 (649)
|..+|++.+...+......+- +++++|++...+|-+.-+. ...+.++..|+.+.-.+|..-... +...
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~e-------i~~~ 114 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASE-------IAKQ 114 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHH-------HHHH
Confidence 889999998888877766651 3688999999988665332 235778899998877555433222 2223
Q ss_pred ceeecceEEEechHHHHHHHHH
Q 006354 368 VSVLKPTLMAAVPAIFDRVREG 389 (649)
Q Consensus 368 i~~~~~t~l~~~P~~l~~l~~~ 389 (649)
++.-++.++++....+..+...
T Consensus 115 ~~~s~~kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 115 LKDSKPKLIFVDEDFYDKISEA 136 (537)
T ss_pred HHhcCCeEEEEcCchHHHHHHH
Confidence 8888999999999888887654
No 243
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=22.79 E-value=3.6e+02 Score=22.32 Aligned_cols=54 Identities=7% Similarity=-0.153 Sum_probs=38.2
Q ss_pred CCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEe
Q 006354 125 LGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTI 185 (649)
Q Consensus 125 ~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl 185 (649)
......+.+.++.+ .+.+.+..+++.|.++|.++...-.+...+.+.|..-+-+
T Consensus 37 IpGAiniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~~ 90 (104)
T PRK10287 37 VQGAINIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAEN 90 (104)
T ss_pred CCccEECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEEe
Confidence 33345677776543 3455566677889999999988777788888899866544
No 244
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=22.52 E-value=7.7e+02 Score=28.13 Aligned_cols=88 Identities=8% Similarity=-0.053 Sum_probs=62.2
Q ss_pred ceEEeHHHHHHHHHHHHHHHH--HCCCCCCCEEEEEccCC--HHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCc
Q 006354 128 YEWQTYGEVFDRACSFASGLV--NFGHNVDTRAAILAETC--VEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQV 203 (649)
Q Consensus 128 ~~~~TY~eL~~~~~~lA~~L~--~~Gv~~gd~V~i~~~~~--~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~ 203 (649)
.-.+|.+.+...+..+...+. ...+.++|++..++|-. .+... .+.++..|+.++... ..++.+...++..++
T Consensus 237 GV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~ 313 (660)
T PLN02861 237 GVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ--GDIRYLMEDVQALKP 313 (660)
T ss_pred EEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC--CCHHHHHHHHHHhCC
Confidence 346899888877666555432 12357889888888754 34443 344678888876553 467889999999999
Q ss_pred eEEEECchhHHHHHH
Q 006354 204 TTLICDSKQLKKLSA 218 (649)
Q Consensus 204 ~~vi~~~~~~~~l~~ 218 (649)
++++.-+..+..+..
T Consensus 314 T~~~~vP~~~~~l~~ 328 (660)
T PLN02861 314 TIFCGVPRVYDRIYT 328 (660)
T ss_pred cEEeechHHHHHHHH
Confidence 999999888776643
No 245
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=22.46 E-value=8.4e+02 Score=26.83 Aligned_cols=85 Identities=8% Similarity=-0.080 Sum_probs=61.6
Q ss_pred eEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEE
Q 006354 129 EWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEW-FIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLI 207 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~-vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 207 (649)
-.+|.+.+...+... ....++++++++...+|-...+ +..+++.+..|+.++... ...++.+...|++.++..+.
T Consensus 198 V~~t~~~~~~~~~~~---~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~ 273 (542)
T PRK06155 198 VCCPHAQFYWWGRNS---AEDLEIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLEP-RFSASGFWPAVRRHGATVTY 273 (542)
T ss_pred EEEEHHHHHHHHHHH---HHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEeeC-CCCHHHHHHHHHHhCCcEEE
Confidence 356888876544333 3445789999998888754332 335688888898887654 56788999999999999998
Q ss_pred ECchhHHHHH
Q 006354 208 CDSKQLKKLS 217 (649)
Q Consensus 208 ~~~~~~~~l~ 217 (649)
.....+..+.
T Consensus 274 ~~p~~~~~l~ 283 (542)
T PRK06155 274 LLGAMVSILL 283 (542)
T ss_pred chHHHHHHHH
Confidence 8877665554
No 246
>PLN03102 acyl-activating enzyme; Provisional
Probab=22.32 E-value=3.3e+02 Score=30.44 Aligned_cols=96 Identities=13% Similarity=0.063 Sum_probs=61.9
Q ss_pred CCCCeEEEEeecCCCCCcceEEechHHHHHHHHHHHhhC--CCCCCCcEEEEccChHHHHHHH-HHHHHHHhCceEEeCC
Q 006354 273 SQNGVAVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI--PNPGRSDVYLAYLPLAHVLELA-AESIMLCAGCAIGYGS 349 (649)
Q Consensus 273 ~~~~~a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~~d~~l~~~pl~h~~~~~-~~~~~l~~G~~l~~~~ 349 (649)
.|+.+|++. . +-.+|.+.+...+..+...+ .++.++|++..++|-. ..+. .++.++..|+.++..+
T Consensus 27 ~p~~~Al~~--~-------~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~--~e~~~~~la~~~~G~~~vpl~ 95 (579)
T PLN03102 27 YPNRTSIIY--G-------KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNT--PAMYEMHFAVPMAGAVLNPIN 95 (579)
T ss_pred CCCCeEEEE--C-------CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--HHHHHHHHHHHhcCcEEeecc
Confidence 456677654 1 12588888877776665543 2788999998888744 3333 3667888888887755
Q ss_pred cccccccchhhccCccccceeecceEEEechHHHHHH
Q 006354 350 TLTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRV 386 (649)
Q Consensus 350 ~~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 386 (649)
+..-.+. +...++..+++.+++.+.....+
T Consensus 96 ~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~ 125 (579)
T PLN03102 96 TRLDATS-------IAAILRHAKPKILFVDRSFEPLA 125 (579)
T ss_pred ccCCHHH-------HHHHHhccCCeEEEEChhhHHHH
Confidence 5322211 22338888999988877655433
No 247
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=22.31 E-value=4.2e+02 Score=25.62 Aligned_cols=66 Identities=5% Similarity=-0.072 Sum_probs=46.8
Q ss_pred HHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhH
Q 006354 147 LVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL 213 (649)
Q Consensus 147 L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 213 (649)
+.+.|..+++.| +....+-......++|...|..++.+-|...+..-...++..+++++.++....
T Consensus 42 a~~~g~~~~~~v-v~~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~ 107 (244)
T cd00640 42 AEEEGKLPKGVI-IESTGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDFD 107 (244)
T ss_pred HHHcCCCCCCEE-EEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 344443345554 444446666777778888998888887776777778888999999999987643
No 248
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=22.22 E-value=5.6e+02 Score=25.47 Aligned_cols=75 Identities=8% Similarity=-0.107 Sum_probs=51.8
Q ss_pred HHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEE--EecCCCCHHHHHHHHhhcCceEEEECc----hhHHHHHHh
Q 006354 146 GLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVV--TIYSSLGEDALIHSLNETQVTTLICDS----KQLKKLSAV 219 (649)
Q Consensus 146 ~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~v--pl~~~~~~~~l~~~l~~~~~~~vi~~~----~~~~~l~~~ 219 (649)
.+.+..--+|-+|+.|+.-.++..+.+..+...||-+. .-||..+.+.+...|...++.+.--.. +....+.++
T Consensus 34 ~~~~~kPl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A~~get~eey~~~i~~~ 113 (268)
T PF05221_consen 34 RFEAEKPLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFAWKGETDEEYWWCIEKA 113 (268)
T ss_dssp HHTTT-TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE-TT--HHHHHHHHHHC
T ss_pred HhhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEEeCCCCHHHHHHHHHHH
Confidence 33333455699999999999999999999999998665 457888999999999999987766443 334444444
Q ss_pred h
Q 006354 220 S 220 (649)
Q Consensus 220 ~ 220 (649)
.
T Consensus 114 L 114 (268)
T PF05221_consen 114 L 114 (268)
T ss_dssp H
T ss_pred h
Confidence 4
No 249
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=22.03 E-value=2.7e+02 Score=30.82 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=60.8
Q ss_pred EEEEeecCCCCCcceEEechHHHHHHHHHHHhhC---CCCCCCcEEEEccChHHHHHHHHHHHHHHhCceEEe----CCc
Q 006354 278 AVIMYTSGSTGLPKGVMITHGNIVATAAAIKTLI---PNPGRSDVYLAYLPLAHVLELAAESIMLCAGCAIGY----GST 350 (649)
Q Consensus 278 a~i~~TSGSTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~l~~----~~~ 350 (649)
..|+|-+-.++. -.+|.+.+...+..+...+ .+. ++|+++.++|...- ....++++.-.|+.... +.+
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe-~~~a~LA~~riGAI~~~vf~~f~~ 101 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPE-AVIALLATARIGAIPAVVSPGLSA 101 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHH-HHHHHHHHHHcCCEEeecccCCCH
Confidence 445565554444 7788888877766665544 246 89999999998753 23346777888876655 555
Q ss_pred ccccccchhhccCccccceeecceEEEechHHHHHH
Q 006354 351 LTMTDTSSKIKKGTKGDVSVLKPTLMAAVPAIFDRV 386 (649)
Q Consensus 351 ~~l~~~~~~~~~~~~~~i~~~~~t~l~~~P~~l~~l 386 (649)
..+.+- +.+.++.++++....++..
T Consensus 102 ~al~~R-----------i~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 102 EAVADR-----------IADLGPKVLIADDGTFRNG 126 (528)
T ss_pred HHHHHH-----------HHccCCCEEEEeccccccc
Confidence 555444 6777777777666665543
No 250
>COG1424 BioW Pimeloyl-CoA synthetase [Coenzyme metabolism]
Probab=21.88 E-value=1e+02 Score=28.51 Aligned_cols=51 Identities=20% Similarity=0.250 Sum_probs=35.3
Q ss_pred CCCCCccEEEEcc-ccccccccCCCccchhhhccCCCcccceeeCcEEEEcc--CCeEEEEecCCC
Q 006354 522 DKPMPRGEIVVGG-FNVTAGYFNNPGKTSEVYKVDERGMCWFYTGDIGQVYP--DGCLEIIDRKKD 584 (649)
Q Consensus 522 ~~~g~~GEl~v~g-~~v~~gY~~~~~~t~~~f~~~~~~~~w~~TGDlg~~~~--dG~l~i~GR~dd 584 (649)
..+|..+|||.+- |.-..||+...+ .||+|.-|+-.... .|+++|+++.-|
T Consensus 166 ~hp~VvaELC~SDd~dY~TGYvagkk------------iGY~Rit~lKe~gt~~GgRVfFVd~~~d 219 (239)
T COG1424 166 AHPGVVAELCWSDDPDYTTGYVAGKK------------IGYHRITDLKEVGTRYGGRVFFVDDCID 219 (239)
T ss_pred cCcceeEEEeecCCCcceeeeeecce------------eeeEEeecccccCCccCcEEEEEcCccc
Confidence 4577899999864 566778874221 17888777776643 588999887644
No 251
>PRK07476 eutB threonine dehydratase; Provisional
Probab=21.77 E-value=6e+02 Score=25.97 Aligned_cols=54 Identities=13% Similarity=-0.039 Sum_probs=41.6
Q ss_pred EEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhH
Q 006354 160 ILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQL 213 (649)
Q Consensus 160 i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 213 (649)
|....+-.-....++|.+.|..++.+-|...+..-...++..+++++++.....
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~ 124 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQD 124 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 444566667777788889999888777776667777888999999999986543
No 252
>PLN02574 4-coumarate--CoA ligase-like
Probab=21.59 E-value=8.9e+02 Score=26.73 Aligned_cols=89 Identities=11% Similarity=0.034 Sum_probs=58.9
Q ss_pred eEEeHHHHHHHHHHHHHHHHH-CCCCC-CCEEEEEccCCH--HHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCce
Q 006354 129 EWQTYGEVFDRACSFASGLVN-FGHNV-DTRAAILAETCV--EWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVT 204 (649)
Q Consensus 129 ~~~TY~eL~~~~~~lA~~L~~-~Gv~~-gd~V~i~~~~~~--~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~ 204 (649)
-.+|++.+...+..++..... .+... .+++...+|-.. .+...+++.+..|+..+..+ ...++++...+++.++.
T Consensus 216 V~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t 294 (560)
T PLN02574 216 VVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMR-RFDASDMVKVIDRFKVT 294 (560)
T ss_pred EEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEec-CCCHHHHHHHHHHcCCe
Confidence 458999988776666543322 22333 344444444321 22344567778899888664 57789999999999999
Q ss_pred EEEECchhHHHHHH
Q 006354 205 TLICDSKQLKKLSA 218 (649)
Q Consensus 205 ~vi~~~~~~~~l~~ 218 (649)
++......+..+.+
T Consensus 295 ~~~~~P~~~~~l~~ 308 (560)
T PLN02574 295 HFPVVPPILMALTK 308 (560)
T ss_pred EEecCCHHHHHHHh
Confidence 99998888776654
No 253
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=21.54 E-value=3.8e+02 Score=27.35 Aligned_cols=61 Identities=8% Similarity=0.041 Sum_probs=46.4
Q ss_pred CCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECch
Q 006354 150 FGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSK 211 (649)
Q Consensus 150 ~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 211 (649)
.|..+++.|.... .+-.-....++|.+.|..++.+-|...+......++..+++++++...
T Consensus 46 ~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 46 QGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred hhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3434566655544 566667777888899999888888777777788999999999999765
No 254
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=21.01 E-value=8.2e+02 Score=24.53 Aligned_cols=62 Identities=3% Similarity=-0.139 Sum_probs=46.0
Q ss_pred HHCC-CCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECc
Q 006354 148 VNFG-HNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDS 210 (649)
Q Consensus 148 ~~~G-v~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 210 (649)
.+.| +.+|+.|.- ...+-.-....++|.+.|..+..+-|...+..-...++..++++++++.
T Consensus 51 ~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 51 EKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 3445 477776654 5566666667778888999888777776566667889999999999975
No 255
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=20.83 E-value=8.4e+02 Score=26.41 Aligned_cols=70 Identities=11% Similarity=0.049 Sum_probs=50.0
Q ss_pred HHCCCCCCCEEEEEccCCHH-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHhhcCceEEEECchhHHHHHH
Q 006354 148 VNFGHNVDTRAAILAETCVE-WFIAFQGCFRQSITVVTIYSSLGEDALIHSLNETQVTTLICDSKQLKKLSA 218 (649)
Q Consensus 148 ~~~Gv~~gd~V~i~~~~~~~-~vva~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~l~~ 218 (649)
...++.+++++....+-... .....+..+..|+..+.. +...++.+...+++.++.+++..+..+..+..
T Consensus 189 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~ 259 (509)
T PRK12406 189 LIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQ-PRFDPEELLQLIERHRITHMHMVPTMFIRLLK 259 (509)
T ss_pred hhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEc-cCCCHHHHHHHHHHcCCeEEEccHHHHHHHHh
Confidence 34588999988887764322 122333456677776654 56788999999999999999999887766543
No 256
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=20.80 E-value=4.2e+02 Score=20.77 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=35.8
Q ss_pred cCCCceEEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHHhcCCEEEEec
Q 006354 124 HLGDYEWQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCFRQSITVVTIY 186 (649)
Q Consensus 124 ~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~~~G~~~vpl~ 186 (649)
+......+++.++.+... .+.++.+|.+++.++.....+...+.+.|.-+..++
T Consensus 29 hipgA~~ip~~~~~~~~~---------~~~~~~~vvl~c~~g~~a~~~a~~L~~~G~~v~~l~ 82 (90)
T cd01524 29 HIKGAINIPLDELRDRLN---------ELPKDKEIIVYCAVGLRGYIAARILTQNGFKVKNLD 82 (90)
T ss_pred CCCCCEeCCHHHHHHHHH---------hcCCCCcEEEEcCCChhHHHHHHHHHHCCCCEEEec
Confidence 344456788887754332 256778899999988766666667778887444443
No 257
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=20.58 E-value=2.8e+02 Score=25.69 Aligned_cols=46 Identities=9% Similarity=-0.192 Sum_probs=34.5
Q ss_pred EEeHHHHHHHHHHHHHHHHHCCCCCCCEEEEEccCCHHHHHHHHHHH
Q 006354 130 WQTYGEVFDRACSFASGLVNFGHNVDTRAAILAETCVEWFIAFQGCF 176 (649)
Q Consensus 130 ~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA~~ 176 (649)
.+||.|+.+.+.++|..+.+. ......+.|...++-..++..+|-.
T Consensus 16 ~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~~ 61 (181)
T PRK09162 16 LVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLPR 61 (181)
T ss_pred eecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHHH
Confidence 589999999999999999875 2222346677777777777777643
No 258
>TIGR02804 ExbD_2 TonB system transport protein ExbD, group 2. Members of this family are Gram-negative bacterial inner membrane proteins, generally designated ExbD, related to the TolR family modeled by TIGRFAMs TIGR02801. Members always are encoded next to a protein designated ExbB (TIGR02797), related to the TolQ family modeled by TIGRFAMs TIGR02796. ExbD and ExbB together form a proton channel through which they can harness the proton-motive force to energize TonB, which in turn energizes TonB-dependent receptors in the outer membrane. TonB-dependent receptors with known specificity tend to import siderophores or vitamin B12. A TonB system and Tol-Pal system often will co-exist in a single bacterial genome.
Probab=20.16 E-value=1.6e+02 Score=25.22 Aligned_cols=57 Identities=16% Similarity=0.097 Sum_probs=39.3
Q ss_pred EEEEccCCeEEEEecCCCeEEcCCceeeeCChhhhHhccCcccccceEEEecCCCCcccchhhhhhhhh
Q 006354 567 IGQVYPDGCLEIIDRKKDIVKLQHGEYISLGKIPSTTTVLPLLFHHIRLWRNGPMKLASSTKIFQSCVT 635 (649)
Q Consensus 567 lg~~~~dG~l~i~GR~dd~iki~~G~~v~~~eIE~~l~~~p~V~~~~~V~g~~~~~~~~~~~~~~~~~~ 635 (649)
...+++||.+++ +|+.++..+++..|.+...=. ...+-++.+...+..+.+...|++
T Consensus 53 ~v~i~~~g~~~~-----------~~~~v~~~~L~~~l~~~~~~~-~v~i~aD~~~~~~~vv~v~d~~~~ 109 (121)
T TIGR02804 53 LITITADNQLYF-----------NDKPISLEELEAEIAQLNKDQ-KVTLKSDKEAKFQDFVTITDMLKA 109 (121)
T ss_pred EEEEECCCCEEE-----------CCcccCHHHHHHHHHhhCCCC-eEEEEeCCCCCHhHHHHHHHHHHH
Confidence 345666777665 477788888888887663323 456667777778888887777764
No 259
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=20.00 E-value=5.4e+02 Score=27.82 Aligned_cols=67 Identities=12% Similarity=0.068 Sum_probs=46.6
Q ss_pred EeHHHHHHHHHHH--------------H-HHHHHCCCCCCCEEEEEccCCHHHHHHHHH-HHhcCCEEEEe--c------
Q 006354 131 QTYGEVFDRACSF--------------A-SGLVNFGHNVDTRAAILAETCVEWFIAFQG-CFRQSITVVTI--Y------ 186 (649)
Q Consensus 131 ~TY~eL~~~~~~l--------------A-~~L~~~Gv~~gd~V~i~~~~~~~~vva~lA-~~~~G~~~vpl--~------ 186 (649)
-||.+|.+++..+ | +.|...++++||.| .+..++.+..+ +...|++++-+ +
T Consensus 71 ~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV-----psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~ 145 (450)
T TIGR02618 71 RNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV-----PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQ 145 (450)
T ss_pred CcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE-----CCceeHHHHHHHHHhCCeEEEeeecccccccc
Confidence 4899999886544 3 23445689999976 34666667776 78888877766 2
Q ss_pred ---C---CCCHHHHHHHHhhcC
Q 006354 187 ---S---SLGEDALIHSLNETQ 202 (649)
Q Consensus 187 ---~---~~~~~~l~~~l~~~~ 202 (649)
| ...++.+...+...+
T Consensus 146 ~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 146 LNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred cCCCCCCCcCHHHHHHHhcccc
Confidence 1 246888888887543
No 260
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only]
Probab=20.00 E-value=1.8e+02 Score=28.75 Aligned_cols=69 Identities=19% Similarity=0.203 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeecCccccccCCCccceeecCCCceEEeHHHHHHHHHHHHHHHHH-C-CCCCCCE-
Q 006354 81 ASTMAALFEQSCKSHPQDRFLGKRKLLGKDFVTASDGRKFEKLHLGDYEWQTYGEVFDRACSFASGLVN-F-GHNVDTR- 157 (649)
Q Consensus 81 ~~tl~~~~~~~a~~~p~~~al~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~TY~eL~~~~~~lA~~L~~-~-Gv~~gd~- 157 (649)
..-++++++++.+. +||+++-|.. |.- +- .--|++|...+..+-++|.. + |++.++-
T Consensus 196 ar~Ihely~rA~~~---aPcivFiDE~--------DAi-------aL--dRryQelRGDVsEiVNALLTelDgi~eneGV 255 (368)
T COG1223 196 ARRIHELYERARKA---APCIVFIDEL--------DAI-------AL--DRRYQELRGDVSEIVNALLTELDGIKENEGV 255 (368)
T ss_pred HHHHHHHHHHHHhc---CCeEEEehhh--------hhh-------hh--hhhHHHhcccHHHHHHHHHHhccCcccCCce
Confidence 34566777665443 4677776543 221 11 12599999999998888765 3 8887765
Q ss_pred EEEEccCCHHHH
Q 006354 158 AAILAETCVEWF 169 (649)
Q Consensus 158 V~i~~~~~~~~v 169 (649)
|-|++.|.++++
T Consensus 256 vtIaaTN~p~~L 267 (368)
T COG1223 256 VTIAATNRPELL 267 (368)
T ss_pred EEEeecCChhhc
Confidence 566777888764
Done!