Query 006357
Match_columns 648
No_of_seqs 326 out of 1570
Neff 6.5
Searched_HMMs 46136
Date Thu Mar 28 22:06:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006357.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006357hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03552 Cellulose_synt: Cellu 100.0 9E-176 2E-180 1462.7 41.9 642 1-646 3-708 (720)
2 PLN02400 cellulose synthase 100.0 1E-173 3E-178 1484.6 49.4 641 1-646 360-1066(1085)
3 PLN02638 cellulose synthase A 100.0 2E-173 5E-178 1482.1 50.2 641 1-646 353-1061(1079)
4 PLN02436 cellulose synthase A 100.0 6E-173 1E-177 1472.7 52.4 640 1-646 369-1076(1094)
5 PLN02195 cellulose synthase A 100.0 1E-171 2E-176 1457.7 53.1 640 1-646 256-957 (977)
6 PLN02190 cellulose synthase-li 100.0 1E-171 3E-176 1432.0 50.8 636 1-643 97-756 (756)
7 PLN02189 cellulose synthase 100.0 2E-171 3E-176 1463.1 51.2 640 1-646 335-1022(1040)
8 PLN02915 cellulose synthase A 100.0 7E-171 2E-175 1457.9 53.1 642 1-646 291-1026(1044)
9 PLN02248 cellulose synthase-li 100.0 7E-168 1E-172 1434.9 52.4 643 1-646 371-1120(1135)
10 PLN02893 Cellulose synthase-li 100.0 1E-163 3E-168 1374.8 54.6 605 1-642 105-729 (734)
11 TIGR03030 CelA cellulose synth 100.0 4E-61 8.6E-66 559.5 47.1 425 1-625 135-574 (713)
12 PRK11498 bcsA cellulose syntha 100.0 2.7E-61 5.9E-66 560.0 43.6 402 1-619 264-681 (852)
13 PRK05454 glucosyltransferase M 100.0 9.8E-34 2.1E-38 325.9 45.2 214 157-454 192-414 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 1.8E-34 3.8E-39 297.6 23.9 178 157-411 67-253 (254)
15 PRK14583 hmsR N-glycosyltransf 100.0 4.1E-30 8.9E-35 285.2 35.5 220 9-420 84-311 (444)
16 COG1215 Glycosyltransferases, 100.0 1.7E-30 3.6E-35 285.5 26.1 222 2-415 59-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 8.1E-29 1.7E-33 272.2 35.6 216 9-416 63-286 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 7.5E-28 1.6E-32 266.8 31.6 268 2-465 54-339 (439)
19 PRK14716 bacteriophage N4 adso 100.0 8.8E-27 1.9E-31 260.3 32.6 189 173-441 135-355 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 99.9 7.9E-26 1.7E-30 228.0 21.0 214 9-409 10-232 (232)
21 cd06421 CESA_CelA_like CESA_Ce 99.9 1.3E-25 2.8E-30 224.8 20.8 220 2-413 6-234 (234)
22 cd06435 CESA_NdvC_like NdvC_li 99.9 3.2E-25 6.8E-30 223.4 23.0 224 1-414 2-233 (236)
23 cd06427 CESA_like_2 CESA_like_ 99.9 3.6E-25 7.8E-30 225.0 20.9 222 2-415 6-236 (241)
24 PRK11234 nfrB bacteriophage N4 99.9 2.8E-24 6.2E-29 249.0 30.6 166 173-414 132-334 (727)
25 cd04190 Chitin_synth_C C-termi 99.9 4.2E-23 9E-28 211.2 14.3 168 178-411 64-243 (244)
26 PF13641 Glyco_tranf_2_3: Glyc 99.9 6.9E-24 1.5E-28 212.3 6.2 162 159-408 60-228 (228)
27 cd04192 GT_2_like_e Subfamily 99.9 1.2E-21 2.5E-26 195.0 20.5 219 1-408 1-229 (229)
28 PRK15489 nfrB bacteriophage N4 99.9 7.2E-20 1.6E-24 210.3 29.7 166 173-414 140-342 (703)
29 TIGR03472 HpnI hopanoid biosyn 99.9 6.5E-20 1.4E-24 199.4 27.7 163 159-410 100-273 (373)
30 cd02520 Glucosylceramide_synth 99.8 5.6E-20 1.2E-24 181.1 17.5 121 174-408 73-195 (196)
31 cd06434 GT2_HAS Hyaluronan syn 99.8 7.2E-20 1.6E-24 183.8 17.2 163 173-411 63-234 (235)
32 cd06439 CESA_like_1 CESA_like_ 99.8 2.8E-18 6.2E-23 174.4 19.5 149 174-411 96-250 (251)
33 cd02525 Succinoglycan_BP_ExoA 99.8 4.3E-17 9.4E-22 164.2 20.1 218 2-414 5-232 (249)
34 PF13632 Glyco_trans_2_3: Glyc 99.8 1.5E-17 3.2E-22 163.0 15.3 134 194-409 1-143 (193)
35 TIGR03469 HonB hopene-associat 99.7 2.6E-15 5.6E-20 164.0 30.4 214 9-406 49-279 (384)
36 COG2943 MdoH Membrane glycosyl 99.7 9.7E-15 2.1E-19 157.9 33.8 214 157-454 212-434 (736)
37 cd06436 GlcNAc-1-P_transferase 99.6 3.2E-15 6.9E-20 147.1 15.9 111 157-273 50-175 (191)
38 cd06438 EpsO_like EpsO protein 99.6 5E-15 1.1E-19 144.2 12.7 96 173-273 62-167 (183)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.5 1.2E-13 2.7E-18 135.1 15.4 114 9-234 10-123 (202)
40 PF13506 Glyco_transf_21: Glyc 99.5 2.2E-13 4.8E-18 133.2 14.0 149 173-407 16-175 (175)
41 cd04195 GT2_AmsE_like GT2_AmsE 99.5 4.5E-13 9.8E-18 131.2 15.3 65 159-235 57-121 (201)
42 cd06433 GT_2_WfgS_like WfgS an 99.4 4.8E-12 1E-16 122.5 14.9 55 174-235 62-116 (202)
43 cd02510 pp-GalNAc-T pp-GalNAc- 99.4 1.8E-11 3.9E-16 128.8 19.1 109 1-219 2-110 (299)
44 cd04196 GT_2_like_d Subfamily 99.4 8E-12 1.7E-16 122.9 14.0 119 1-235 2-120 (214)
45 cd04186 GT_2_like_c Subfamily 99.3 3.2E-11 7E-16 113.2 16.4 64 174-273 61-124 (166)
46 cd02522 GT_2_like_a GT_2_like_ 99.3 4E-11 8.7E-16 119.0 17.1 41 174-219 59-99 (221)
47 cd06420 GT2_Chondriotin_Pol_N 99.3 7.3E-11 1.6E-15 113.6 17.3 39 174-217 66-104 (182)
48 PF03142 Chitin_synth_2: Chiti 99.2 1.2E-08 2.5E-13 114.8 32.2 168 190-413 200-378 (527)
49 cd06913 beta3GnTL1_like Beta 1 99.2 3.8E-10 8.1E-15 112.8 18.5 110 2-219 2-111 (219)
50 cd06442 DPM1_like DPM1_like re 99.2 4.3E-10 9.3E-15 111.9 18.3 53 157-219 53-105 (224)
51 cd04185 GT_2_like_b Subfamily 99.2 3.7E-10 8E-15 111.0 17.1 61 159-229 53-113 (202)
52 cd02526 GT2_RfbF_like RfbF is 99.2 9.3E-11 2E-15 117.9 12.9 69 157-234 47-117 (237)
53 cd06423 CESA_like CESA_like is 99.2 1.6E-10 3.5E-15 107.7 11.1 117 1-233 1-117 (180)
54 PLN02726 dolichyl-phosphate be 99.2 2E-09 4.4E-14 109.8 19.1 61 158-231 69-129 (243)
55 cd04188 DPG_synthase DPG_synth 99.1 6E-09 1.3E-13 103.4 17.1 50 160-219 60-109 (211)
56 PF00535 Glycos_transf_2: Glyc 99.0 3.9E-10 8.4E-15 105.1 7.1 158 1-274 2-166 (169)
57 PRK10073 putative glycosyl tra 99.0 4.4E-09 9.4E-14 112.9 15.7 59 157-227 61-119 (328)
58 TIGR01556 rhamnosyltran L-rham 99.0 4.8E-09 1E-13 109.2 14.5 66 157-230 45-110 (281)
59 PRK10018 putative glycosyl tra 98.9 1.6E-08 3.5E-13 106.1 14.7 61 157-229 60-120 (279)
60 cd04179 DPM_DPG-synthase_like 98.9 3.4E-08 7.4E-13 95.1 15.1 119 1-235 1-119 (185)
61 KOG2571 Chitin synthase/hyalur 98.8 4E-08 8.6E-13 114.3 15.1 162 175-408 426-596 (862)
62 cd04187 DPM1_like_bac Bacteria 98.8 2.6E-07 5.7E-12 89.2 17.3 106 157-274 55-160 (181)
63 PRK10063 putative glycosyl tra 98.8 1.5E-07 3.2E-12 97.2 16.0 35 174-213 69-103 (248)
64 PF10111 Glyco_tranf_2_2: Glyc 98.8 2.3E-07 5.1E-12 97.3 17.1 57 174-235 75-131 (281)
65 cd00761 Glyco_tranf_GTA_type G 98.6 1.2E-06 2.6E-11 79.5 15.3 52 173-231 63-114 (156)
66 PTZ00260 dolichyl-phosphate be 98.5 9.4E-06 2E-10 87.5 20.0 63 158-230 138-200 (333)
67 COG1216 Predicted glycosyltran 98.3 5E-06 1.1E-10 88.2 12.8 69 157-235 56-125 (305)
68 PRK13915 putative glucosyl-3-p 98.2 9.7E-06 2.1E-10 86.4 11.1 52 173-230 101-152 (306)
69 PRK10714 undecaprenyl phosphat 98.1 9.5E-05 2.1E-09 79.4 16.7 41 174-219 77-117 (325)
70 cd02511 Beta4Glucosyltransfera 97.6 0.0004 8.6E-09 70.3 11.2 41 174-219 58-98 (229)
71 COG0463 WcaA Glycosyltransfera 97.5 0.0008 1.7E-08 62.5 10.3 39 2-46 8-46 (291)
72 KOG2547 Ceramide glucosyltrans 97.2 0.0012 2.6E-08 70.5 8.1 171 155-407 138-314 (431)
73 cd02514 GT13_GLCNAC-TI GT13_GL 96.5 0.036 7.7E-07 59.9 12.9 50 173-230 84-136 (334)
74 KOG2978 Dolichol-phosphate man 95.1 0.17 3.6E-06 50.0 9.8 53 157-219 63-115 (238)
75 KOG2977 Glycosyltransferase [G 94.2 0.2 4.3E-06 52.4 8.6 41 174-218 144-186 (323)
76 PF02364 Glucan_synthase: 1,3- 93.9 1.2 2.5E-05 53.1 15.1 75 359-439 409-484 (817)
77 PF13712 Glyco_tranf_2_5: Glyc 88.7 1.6 3.5E-05 44.3 8.0 48 174-228 41-89 (217)
78 PF13704 Glyco_tranf_2_4: Glyc 82.0 7.2 0.00016 33.6 7.8 27 175-204 58-84 (97)
79 cd00899 b4GalT Beta-4-Galactos 75.6 8.7 0.00019 39.2 7.1 53 361-413 138-200 (219)
80 KOG0916 1,3-beta-glucan syntha 75.3 98 0.0021 39.5 16.7 82 359-446 1173-1256(1679)
81 PF13896 Glyco_transf_49: Glyc 57.2 13 0.00028 40.1 4.3 44 180-228 120-164 (317)
82 TIGR02460 osmo_MPGsynth mannos 57.1 64 0.0014 35.2 9.3 54 171-231 140-193 (381)
83 PRK09382 ispDF bifunctional 2- 55.9 28 0.0006 38.5 6.7 57 175-235 83-159 (378)
84 PF03452 Anp1: Anp1; InterPro 48.4 97 0.0021 32.7 8.9 40 176-216 128-167 (269)
85 PRK14502 bifunctional mannosyl 44.2 1.2E+02 0.0027 36.1 9.8 45 171-218 145-189 (694)
86 PRK14503 mannosyl-3-phosphogly 41.1 1.2E+02 0.0025 33.4 8.3 53 172-231 142-194 (393)
87 PF02709 Glyco_transf_7C: N-te 35.1 32 0.00069 29.2 2.4 21 362-382 47-67 (78)
88 PF04724 Glyco_transf_17: Glyc 34.5 68 0.0015 35.2 5.5 38 174-213 162-199 (356)
89 PHA01631 hypothetical protein 32.9 15 0.00033 35.6 0.2 72 175-273 56-127 (176)
90 KOG3177 Oligoketide cyclase/li 30.7 39 0.00085 34.1 2.6 39 41-79 77-115 (227)
91 KOG3737 Predicted polypeptide 26.7 1.6E+02 0.0035 32.7 6.5 37 189-228 238-274 (603)
92 KOG3738 Predicted polypeptide 25.0 72 0.0016 35.4 3.5 39 9-47 133-171 (559)
93 cd02503 MobA MobA catalyzes th 24.9 2.5E+02 0.0055 26.6 7.2 41 173-217 69-109 (181)
94 PF02434 Fringe: Fringe-like; 24.9 2E+02 0.0043 29.8 6.8 28 190-218 85-112 (252)
95 KOG3093 5-formyltetrahydrofola 24.6 1.3E+02 0.0028 30.0 4.9 51 15-66 33-84 (200)
96 KOG3736 Polypeptide N-acetylga 22.9 93 0.002 36.4 4.1 51 159-219 203-253 (578)
97 PF02012 BNR: BNR/Asp-box repe 22.3 62 0.0013 18.0 1.3 9 36-44 1-9 (12)
98 PRK00317 mobA molybdopterin-gu 22.0 2.5E+02 0.0054 27.2 6.6 42 174-219 75-116 (193)
99 PF12804 NTP_transf_3: MobA-li 20.6 2.6E+02 0.0057 25.9 6.2 54 174-231 71-124 (160)
100 PF10443 RNA12: RNA12 protein; 20.0 2E+02 0.0043 32.5 5.8 78 158-261 18-101 (431)
No 1
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=8.5e-176 Score=1462.74 Aligned_cols=642 Identities=44% Similarity=0.739 Sum_probs=591.3
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
||||||||++|||++|+|||||+||+|||+|||+|||||||||++||++|.||++|||+||||||||+||||+|++||+.
T Consensus 3 vFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF~~ 82 (720)
T PF03552_consen 3 VFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYFSS 82 (720)
T ss_pred eEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHhcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccc----cCcccccccccccCCCccEEEEecCCCcc---c
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDM----TGEMAVFSDTERRDHPAIVKVIWENKEDL---S 153 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~vl~d~~~~~---~ 153 (648)
+.++.+++.+++|++||++||++|||||+|||.+.++..+.+. ..|+++|++++++|||+||||+++++++. +
T Consensus 83 ~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~~~~g 162 (720)
T PF03552_consen 83 KIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGKDVDG 162 (720)
T ss_pred CCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCccccc
Confidence 9998899999999999999999999999999998776444333 24579999999999999999999987654 5
Q ss_pred CCCCcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCC-CcEEEEcCCc
Q 006357 154 NGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKE-GDCAFVQSPQ 232 (648)
Q Consensus 154 ~~~p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~-~~va~VQ~PQ 232 (648)
+++|+|+||+||||||++||+||||||+++|||+++||+|||+|+|||||+|||+.++++||||+|++. +++||||+||
T Consensus 163 ~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq 242 (720)
T PF03552_consen 163 NELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQ 242 (720)
T ss_pred CcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCc
Confidence 679999999999999999999999999999999999999999999999999999999999999999985 9999999999
Q ss_pred ccc-----ChhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhccc-------------c-------
Q 006357 233 YFY-----DSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGK-------------C------- 287 (648)
Q Consensus 233 ~f~-----D~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~-------------~------- 287 (648)
+|+ |+|+|++++||+++++|+||+|||+|+||||+|||+||||.++++...... +
T Consensus 243 ~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~ 322 (720)
T PF03552_consen 243 RFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKK 322 (720)
T ss_pred eeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccccccccc
Confidence 999 999999999999999999999999999999999999999999975322110 0
Q ss_pred cC--------------------C---------CCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCCchhHHHHhhhh
Q 006357 288 IN--------------------S---------VNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQV 338 (648)
Q Consensus 288 ~~--------------------~---------~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v 338 (648)
.+ . ....+..++.++||+|++|++|+..+..+. ....+..+.+++|++|
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~--~~~~~~~~~L~EA~~V 400 (720)
T PF03552_consen 323 PKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGV--PRSPSPASLLEEAIHV 400 (720)
T ss_pred chhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCC--CCCCChHHHHHHHHHH
Confidence 00 0 112345678899999999999987543222 2244556789999999
Q ss_pred cccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhhHhhchhHHHHHhhcc
Q 006357 339 AGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHS 418 (648)
Q Consensus 339 ~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~ 418 (648)
++|+||++|+||||+||.|+|+|||+.||++||++||||+||+|+++||.|.||+|+.+.+.|++||+.|++||+++|+|
T Consensus 401 ~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~ 480 (720)
T PF03552_consen 401 ASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHC 480 (720)
T ss_pred hcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccccCchhHHHHHHHHHHHHHHHHHHHHHhcCC
Q 006357 419 PILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGF 498 (648)
Q Consensus 419 pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~G~ 498 (648)
|++.++.++|+++||++|++.++||+.|+|.++|+++|++||++|++++|+++.+++++|++++++++++++++++|+|.
T Consensus 481 Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~ 560 (720)
T PF03552_consen 481 PLWYGYGGRLKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGV 560 (720)
T ss_pred chhccCCCCCcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccC
Confidence 99997668999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCCCCCCCCCCccccccCCcchHHHHHHHHHHHHHH
Q 006357 499 PIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVHLAAL 578 (648)
Q Consensus 499 ~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~~~~~~~f~~s~l~~P~~~l~~l~l~al 578 (648)
++++|||+||+|+|.++++|++|++++++|+||+++.+|.||+|..+++++ ...+.|.|+|+++++|+++++++|++|+
T Consensus 561 si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~-~~~ely~f~wS~LfiP~tTllilNLva~ 639 (720)
T PF03552_consen 561 SIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDD-KYAELYIFKWSPLFIPPTTLLILNLVAF 639 (720)
T ss_pred cHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeecccccccccc-cccccccccccchhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999884433 3467899999999999999999999999
Q ss_pred HHHHhhcccCC--CCchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHHHHhhhccc
Q 006357 579 ATGLLGMQPQG--GQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSS 646 (648)
Q Consensus 579 ~~g~~~~~~~~--~~~~~~~~l~~~~~~v~~l~p~~~al~~k~~~~~P~~~~~~s~~~~~~~~~~~~~~~ 646 (648)
++|+++.+.++ +++++++++|+++|+++++|||++||++|+ +|+|++|++||++||++||++|+++.
T Consensus 640 v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~-~r~P~~v~v~S~lla~i~~llwv~i~ 708 (720)
T PF03552_consen 640 VVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRK-DRIPTSVIVWSVLLASIFSLLWVRID 708 (720)
T ss_pred HHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhccc-CCcceeehHHHHHHHHHHHHHheecc
Confidence 99999987643 578899999999999999999999999554 47999999999999999999999874
No 2
>PLN02400 cellulose synthase
Probab=100.00 E-value=1.2e-173 Score=1484.58 Aligned_cols=641 Identities=37% Similarity=0.626 Sum_probs=589.1
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
||||||||+||||++|+|||||+||+|||+|||+|||||||||++||+||.||++||++||||||||+||||+||+||+.
T Consensus 360 vFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRaPe~YFs~ 439 (1085)
T PLN02400 360 VFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQ 439 (1085)
T ss_pred eEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccC----cccccccccccCCCccEEEEecCCCcc---c
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTG----EMAVFSDTERRDHPAIVKVIWENKEDL---S 153 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~vl~d~~~~~---~ 153 (648)
+.++.+++.+|+|++||++||++|||||+|||++.++..+.+..+ +++.|++.+++|||+||||++|++++. +
T Consensus 440 ~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~d~~g 519 (1085)
T PLN02400 440 KIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDG 519 (1085)
T ss_pred CCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCCCCCCCCchhhhhhhcCCCCccccc
Confidence 988777888999999999999999999999999986655555444 689999999999999999999997652 5
Q ss_pred CCCCcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCC-CcEEEEcCCc
Q 006357 154 NGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKE-GDCAFVQSPQ 232 (648)
Q Consensus 154 ~~~p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~-~~va~VQ~PQ 232 (648)
.++|+||||+||||||++||+||||||+++||||++||+|||+|+|||||+|||+++|++||||+|+++ +++||||+||
T Consensus 520 ~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQ 599 (1085)
T PLN02400 520 NELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQ 599 (1085)
T ss_pred ccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCc
Confidence 579999999999999999999999999999999999999999999999999999999999999999976 8999999999
Q ss_pred ccc-----ChhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhc------------cc-cc------
Q 006357 233 YFY-----DSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQ------------GK-CI------ 288 (648)
Q Consensus 233 ~f~-----D~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~------------~~-~~------ 288 (648)
+|+ |+|+|++++||++.++|+||+|||+|+||||+|||+||||.+|+..+.. .+ ..
T Consensus 600 rF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (1085)
T PLN02400 600 RFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCCGSRKKGKGSKKY 679 (1085)
T ss_pred ccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCccccccccccccccccccccccccccccc
Confidence 999 8999999999999999999999999999999999999999977422100 00 00
Q ss_pred -----CC---------------------------CCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCCchhHHHHhh
Q 006357 289 -----NS---------------------------VNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAAN 336 (648)
Q Consensus 289 -----~~---------------------------~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~~~~~~~~a~ 336 (648)
+. ....+..++.++||.|.+|++|+... +|.. .++.+.++.+++|+
T Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~-~~~~-~~~~~~~~ll~eA~ 757 (1085)
T PLN02400 680 NIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFME-QGGI-PPSTNPATLLKEAI 757 (1085)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHHHHHHHHHH-hcCC-CCCCCcHHHHHHHH
Confidence 00 00123455778999999999999844 3332 22445677999999
Q ss_pred hhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhhHhhchhHHHHHhh
Q 006357 337 QVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSE 416 (648)
Q Consensus 337 ~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~ 416 (648)
+|++|+||++|+||+|+||.|+|+|||+.||++||++||||+||+|++.+|.|+||+|+.++++||+||++|++||++++
T Consensus 758 ~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr 837 (1085)
T PLN02400 758 HVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSR 837 (1085)
T ss_pred HhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeecc
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred cchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccccCchhHHHHHHHHHHHHHHHHHHHHHhc
Q 006357 417 HSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHG 496 (648)
Q Consensus 417 ~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 496 (648)
++|++.++.++|++.||++|+++++||+.++++++|+++|++||++|++++|.++++++++|+.++++++++++++++|+
T Consensus 838 ~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~s 917 (1085)
T PLN02400 838 HCPIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWS 917 (1085)
T ss_pred CCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999764578999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCCCCCCCCCCccccccCCcchHHHHHHHHHHHH
Q 006357 497 GFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVHLA 576 (648)
Q Consensus 497 G~~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~~~~~~~f~~s~l~~P~~~l~~l~l~ 576 (648)
|.++++|||+||+|+|.++++|++|++++++|+||+++.+|.||+|..+.+. .++++|+|+|+++++|+++++++|++
T Consensus 918 G~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~~--~~~ely~f~~s~L~iP~ttl~llNlv 995 (1085)
T PLN02400 918 GVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDG--DFAELYVFKWTSLLIPPTTVLLVNLV 995 (1085)
T ss_pred CccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCcccccc--cccceeeecccchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999876432 24789999999999999999999999
Q ss_pred HHHHHHhhcccCC--CCchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHHHHhhhccc
Q 006357 577 ALATGLLGMQPQG--GQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSS 646 (648)
Q Consensus 577 al~~g~~~~~~~~--~~~~~~~~l~~~~~~v~~l~p~~~al~~k~~~~~P~~~~~~s~~~~~~~~~~~~~~~ 646 (648)
|+++|+++.+.++ +++.+++++|+++|+++++|||++||++|+ +|+|++|++||++|+++|+++||++.
T Consensus 996 aiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~-~r~P~~v~~~s~lla~~~~l~~v~~~ 1066 (1085)
T PLN02400 996 GIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQ-NRTPTIVIVWSILLASIFSLLWVRID 1066 (1085)
T ss_pred HHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhccC-CCCceeHHHHHHHHHHHHHHHheecc
Confidence 9999999987644 578899999999999999999999999776 89999999999999999999999864
No 3
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=2.1e-173 Score=1482.14 Aligned_cols=641 Identities=36% Similarity=0.629 Sum_probs=589.7
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
||||||||++|||++|+|||||+||+|||+|||+|||||||||++||+||.||++||++||||||||+||||+|++||+.
T Consensus 353 vFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~ 432 (1079)
T PLN02638 353 IFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEWYFAQ 432 (1079)
T ss_pred EEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccC----cccccccccccCCCccEEEEecCCCcc---c
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTG----EMAVFSDTERRDHPAIVKVIWENKEDL---S 153 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~vl~d~~~~~---~ 153 (648)
+.++.+++.+|+|++||++||++|||||+|||.+.++..+.++.+ +++.|++..++|||+||||++|++++. +
T Consensus 433 ~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~~~~d~~g 512 (1079)
T PLN02638 433 KIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEG 512 (1079)
T ss_pred CCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCCCCCCCCHHHHHHHhcCCCcccccc
Confidence 988888888999999999999999999999999987766666544 479999999999999999999887643 4
Q ss_pred CCCCcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCC-CcEEEEcCCc
Q 006357 154 NGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKE-GDCAFVQSPQ 232 (648)
Q Consensus 154 ~~~p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~-~~va~VQ~PQ 232 (648)
.++|+|+||+||||||++||+||||||+++||||++||||||+|+|||||+|||++++++||||+|+++ +++|||||||
T Consensus 513 ~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp~~g~~vafVQFPQ 592 (1079)
T PLN02638 513 NELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQ 592 (1079)
T ss_pred ccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCcccCCeeEEecCCc
Confidence 579999999999999999999999999999999999999999999999999999999999999999876 8999999999
Q ss_pred ccc-----ChhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhc-----------c-ccc-------
Q 006357 233 YFY-----DSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQ-----------G-KCI------- 288 (648)
Q Consensus 233 ~f~-----D~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~-----------~-~~~------- 288 (648)
+|| |+|+|++++||+++|+|+||+|||+||||||+|||+||||.+|++.... . +..
T Consensus 593 rF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1079)
T PLN02638 593 RFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCGGSRKKSSKSSKK 672 (1079)
T ss_pred ccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCcccccccccccccccccccccccccccch
Confidence 999 9999999999999999999999999999999999999999977643100 0 000
Q ss_pred --------CC-C-------------------------CCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCCchhHHHH
Q 006357 289 --------NS-V-------------------------NGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKA 334 (648)
Q Consensus 289 --------~~-~-------------------------~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~~~~~~~~ 334 (648)
+. . ...+..++.++||+|.+|++|+.....|.. .+.+.++.+++
T Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~--~~~~~~s~l~e 750 (1079)
T PLN02638 673 GSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVP--QSATPESLLKE 750 (1079)
T ss_pred hhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHhhcCCC--CCCCcHHHHHH
Confidence 00 0 001122466889999999999987776544 33456779999
Q ss_pred hhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhhHhhchhHHHHH
Q 006357 335 ANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILL 414 (648)
Q Consensus 335 a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~~qi~~ 414 (648)
|++|++|+||++|+||+|+||.|+|+|||+.||++||++||||+|++|++.+|.|+||+|+.+++.||+||++|++||++
T Consensus 751 A~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~RWA~G~lqI~f 830 (1079)
T PLN02638 751 AIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILF 830 (1079)
T ss_pred HHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHHHhhcchheee
Confidence 99999999999999999999999999999999999999999999998878889999999999999999999999999999
Q ss_pred hhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccccCchhHHHHHHHHHHHHHHHHHHHHH
Q 006357 415 SEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYI 494 (648)
Q Consensus 415 ~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~ 494 (648)
++++|++.+..++|++.||++|+++++||+.+++.++|+++|++||++|++++|+++++++++|++++++++++++++++
T Consensus 831 sr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~llE~~ 910 (1079)
T PLN02638 831 SRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATGILEMR 910 (1079)
T ss_pred ccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997645789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCCCCCCCCCCccccccCCcchHHHHHHHHHH
Q 006357 495 HGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVH 574 (648)
Q Consensus 495 ~~G~~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~~~~~~~f~~s~l~~P~~~l~~l~ 574 (648)
|+|.++++|||+||+|+|.++++|++|++++++|+||+++.+|.||+|..+.++ .++++|+|+|+++++|.++++++|
T Consensus 911 wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d~~~--~~~ely~f~wS~l~iP~ttl~iiN 988 (1079)
T PLN02638 911 WSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDG--DFAELYMFKWTTLLIPPTTLLIIN 988 (1079)
T ss_pred hccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceeccccccccc--cccceeEecceehhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999876442 347899999999999999999999
Q ss_pred HHHHHHHHhhcccCC--CCchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHHHHhhhccc
Q 006357 575 LAALATGLLGMQPQG--GQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSS 646 (648)
Q Consensus 575 l~al~~g~~~~~~~~--~~~~~~~~l~~~~~~v~~l~p~~~al~~k~~~~~P~~~~~~s~~~~~~~~~~~~~~~ 646 (648)
++|+++|+++.+.++ .++.+++++|+++|+++++|||++||++|. +|+|++|++||++++++|+++||++.
T Consensus 989 lvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~-~r~P~~v~v~s~ll~~~~~l~~v~~~ 1061 (1079)
T PLN02638 989 LVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ-NRTPTIVVVWSILLASIFSLLWVRID 1061 (1079)
T ss_pred HHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC-CCCCeeehHHHHHHHHHHHHHHheec
Confidence 999999999987644 578999999999999999999999999555 79999999999999999999999864
No 4
>PLN02436 cellulose synthase A
Probab=100.00 E-value=6.4e-173 Score=1472.67 Aligned_cols=640 Identities=35% Similarity=0.627 Sum_probs=584.8
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
||||||||++|||++|+|||||+||+|||+|||+|||||||||++||+||.||++||++||||||||+||||+||+||+.
T Consensus 369 vFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~YFs~ 448 (1094)
T PLN02436 369 VFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFSQ 448 (1094)
T ss_pred eEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhhc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc--ccccc--ccCcccccccccccCCCccEEEEecCCCcc---c
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKK--SFLFD--MTGEMAVFSDTERRDHPAIVKVIWENKEDL---S 153 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~---~ 153 (648)
+.++.+++.+++|++||++||++|||||+|||++.++ .++.+ ...++++|++.+++|||+||||++|++++. +
T Consensus 449 ~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~d~~g 528 (1094)
T PLN02436 449 KMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDVEG 528 (1094)
T ss_pred cCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCCCCccccc
Confidence 9887788889999999999999999999999999864 22222 124568999999999999999999987532 5
Q ss_pred CCCCcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCC-CcEEEEcCCc
Q 006357 154 NGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKE-GDCAFVQSPQ 232 (648)
Q Consensus 154 ~~~p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~-~~va~VQ~PQ 232 (648)
.++|+||||+||||||++||+||||||+++||||++||+|||+|+|||||+|||+++|++||||+|+++ +++||||+||
T Consensus 529 ~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~~~g~~~afVQFPQ 608 (1094)
T PLN02436 529 NELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQ 608 (1094)
T ss_pred ccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhhcCCccCCeeEEEcCCc
Confidence 579999999999999999999999999999999999999999999999999999999999999999876 8999999999
Q ss_pred ccc-----ChhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcc-----------------ccc--
Q 006357 233 YFY-----DSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQG-----------------KCI-- 288 (648)
Q Consensus 233 ~f~-----D~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~-----------------~~~-- 288 (648)
+|| |+|+|++++||++.++|+||+|||+|+||||+|||+||||.+|+...... +..
T Consensus 609 rF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (1094)
T PLN02436 609 RFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKK 688 (1094)
T ss_pred ccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCccccccccccccccccccccccccccccc
Confidence 999 89999999999999999999999999999999999999999876321100 000
Q ss_pred -----C--------C---------------------CCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCCchhHHHH
Q 006357 289 -----N--------S---------------------VNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKA 334 (648)
Q Consensus 289 -----~--------~---------------------~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~~~~~~~~ 334 (648)
+ . ....+..++.++||.|.+|++|+.....|.+ .+.+.++.+++
T Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~--~~~~~~s~l~e 766 (1094)
T PLN02436 689 KKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVP--RNASPASLLRE 766 (1094)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCC--CCCCcHHHHHH
Confidence 0 0 0012334566889999999999987653322 23355678999
Q ss_pred hhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhhHhhchhHHHHH
Q 006357 335 ANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILL 414 (648)
Q Consensus 335 a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~~qi~~ 414 (648)
|++|++|+||++|+||+|+||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++||++
T Consensus 767 A~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIff 846 (1094)
T PLN02436 767 AIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFL 846 (1094)
T ss_pred HHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeee
Confidence 99999999999999999999999999999999999999999999998888889999999999999999999999999999
Q ss_pred hhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccccCchhHHHHHHHHHHHHHHHHHHHHH
Q 006357 415 SEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYI 494 (648)
Q Consensus 415 ~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~ 494 (648)
++++|++.+..++|+++||++|+++++||+.+++.++|+++|++||++|++++|.++.+++++|++++++++++++++++
T Consensus 847 sr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~ 926 (1094)
T PLN02436 847 SRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQ 926 (1094)
T ss_pred ccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997645789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCCCCCCCCCCccccccCCcchHHHHHHHHHH
Q 006357 495 HGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVH 574 (648)
Q Consensus 495 ~~G~~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~~~~~~~f~~s~l~~P~~~l~~l~ 574 (648)
|+|.++++|||+||+|+|.++++|++|++++++|+||+++.+|.||+|..+.+ ..+++|+|+|+++++|+++++++|
T Consensus 927 wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d~~---~~a~ly~f~~S~L~iP~tti~ilN 1003 (1094)
T PLN02436 927 WGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADDG---EFSELYLFKWTSLLIPPTTLLIIN 1003 (1094)
T ss_pred hccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceecccccccc---cccceeeecceeHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987633 245789999999999999999999
Q ss_pred HHHHHHHHhhcccCC--CCchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHHHHhhhccc
Q 006357 575 LAALATGLLGMQPQG--GQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSS 646 (648)
Q Consensus 575 l~al~~g~~~~~~~~--~~~~~~~~l~~~~~~v~~l~p~~~al~~k~~~~~P~~~~~~s~~~~~~~~~~~~~~~ 646 (648)
++|+++|+.+.+.++ +++.+++++|+++|+++++|||++||+|| ++|+|++|++||++++++|+++||++.
T Consensus 1004 lvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr-~~r~P~~v~v~s~lla~~~~l~~v~~~ 1076 (1094)
T PLN02436 1004 IIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK-QDRMPTIILVWSILLASILTLLWVRVN 1076 (1094)
T ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCeeehHHHHHHHHHHHHHHeeec
Confidence 999999999987644 57889999999999999999999999988 569999999999999999999999864
No 5
>PLN02195 cellulose synthase A
Probab=100.00 E-value=1.1e-171 Score=1457.67 Aligned_cols=640 Identities=36% Similarity=0.619 Sum_probs=585.2
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
||||||||++|||++|+|||||+||+|||+|||+|||||||||++||++|.||++|||+||||||||+||||+|++||+.
T Consensus 256 vFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~ 335 (977)
T PLN02195 256 FFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPRAPEFYFSQ 335 (977)
T ss_pred eEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcccccccc----CcccccccccccCCCccEEEEecCCCcc---c
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMT----GEMAVFSDTERRDHPAIVKVIWENKEDL---S 153 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~vl~d~~~~~---~ 153 (648)
+.++.+++.+|+|++||++||++|||||+|||++.++..+.+.. +++++|++++++|||+||||+++++++. +
T Consensus 336 ~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~~~~d~~g 415 (977)
T PLN02195 336 KIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGETGARDIEG 415 (977)
T ss_pred CCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCCCCccccc
Confidence 98877788889999999999999999999999998764333332 6789999999999999999999877543 5
Q ss_pred CCCCcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCC-CcEEEEcCCc
Q 006357 154 NGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKE-GDCAFVQSPQ 232 (648)
Q Consensus 154 ~~~p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~-~~va~VQ~PQ 232 (648)
.++|+||||+||||||++||+||||||+++|+|+++||+|||+++|||||+|+|++|+++||||+|++. +++|||||||
T Consensus 416 ~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ 495 (977)
T PLN02195 416 NELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQ 495 (977)
T ss_pred ccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCcccCCeeEEEcCCc
Confidence 579999999999999999999999999999999999999999999999999999999999999999876 8999999999
Q ss_pred ccc-----ChhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcc---------------c------
Q 006357 233 YFY-----DSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQG---------------K------ 286 (648)
Q Consensus 233 ~f~-----D~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~---------------~------ 286 (648)
+|| |+|+|++++||+++|+|+||+|||+||||||+|||+||||.+|++..... +
T Consensus 496 ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (977)
T PLN02195 496 RFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSCCCPTKKKPEQDPS 575 (977)
T ss_pred ccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCccccccccccccccccccccccccccccch
Confidence 999 89999999999999999999999999999999999999999865420000 0
Q ss_pred -------ccCC------------------CCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCCchhHHHHhhhhccc
Q 006357 287 -------CINS------------------VNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGC 341 (648)
Q Consensus 287 -------~~~~------------------~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c 341 (648)
.... ....+..++.++||+|.+|++|+.....|... ..+..+++++|++|++|
T Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~--~~~~~~~l~eA~~V~sC 653 (977)
T PLN02195 576 EIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPE--SANPSTLIKEAIHVISC 653 (977)
T ss_pred hhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCC--CCCcHHHHHHHHhhhcc
Confidence 0000 00112235678899999999999877655443 23456789999999999
Q ss_pred ccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhhHhhchhHHHHHhhcchhh
Q 006357 342 GYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPIL 421 (648)
Q Consensus 342 ~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~ 421 (648)
+||++|+||+|+||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++|++|+++++++|++
T Consensus 654 ~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~ 733 (977)
T PLN02195 654 GYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLW 733 (977)
T ss_pred cCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhhhhhccCCccc
Confidence 99999999999999999999999999999999999999998877889999999999999999999999999999999999
Q ss_pred hhcc-CCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccccCchhHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 006357 422 ATLT-GKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGFPI 500 (648)
Q Consensus 422 ~~~~-~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~G~~~ 500 (648)
.+.. ++|+++||++|+++++||+.+++.++|+++|++||++|++++|.++.+++++|++++++++++++++++|+|.++
T Consensus 734 ~g~~~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~~lE~~~sG~si 813 (977)
T PLN02195 734 YGYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSI 813 (977)
T ss_pred cccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccchHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 7532 789999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCCCCCCCCCCccccccCCcchHHHHHHHHHHHHHHHH
Q 006357 501 YSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVHLAALAT 580 (648)
Q Consensus 501 ~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~~~~~~~f~~s~l~~P~~~l~~l~l~al~~ 580 (648)
++|||+||+|+|.++++|++|++++++|+||+++.+|.||+|..+.+ .++++|+|+|+++++|.++++++|++|+++
T Consensus 814 ~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~---~~~~~Y~f~~S~l~iP~ttl~ilNlvaiv~ 890 (977)
T PLN02195 814 EDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDT---EFGELYMVKWTTLLIPPTSLLIINLVGVVA 890 (977)
T ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceecccccccc---chhcceeccceehhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987642 356789999999999999999999999999
Q ss_pred HHhhcccCC--CCchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHHHHhhhccc
Q 006357 581 GLLGMQPQG--GQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSS 646 (648)
Q Consensus 581 g~~~~~~~~--~~~~~~~~l~~~~~~v~~l~p~~~al~~k~~~~~P~~~~~~s~~~~~~~~~~~~~~~ 646 (648)
|+++.+.++ +++.+++++|+++|+++++|||++||++|. +|+|++|++||++++++|+++||++.
T Consensus 891 g~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~-~r~P~~v~v~s~ll~~~~~l~~v~~~ 957 (977)
T PLN02195 891 GFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQ-NRTPTIVVLWSVLLASVFSLVWVKIN 957 (977)
T ss_pred HHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccC-CCCCeeehHHHHHHHHHHHHHHeecc
Confidence 999987654 578899999999999999999999999554 89999999999999999999999864
No 6
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.3e-171 Score=1432.03 Aligned_cols=636 Identities=54% Similarity=0.937 Sum_probs=574.4
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
||||||||++|||++|+|||||+||+|||+||++|||||||||++||+||.||++|||+||||||||+||||+||+||+.
T Consensus 97 vFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFCrK~~IepRaPe~YF~~ 176 (756)
T PLN02190 97 MFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFRYFLN 176 (756)
T ss_pred EEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcccccccCCCcCCHHHHhcC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcc--cCCCCc
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDL--SNGLPH 158 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~--~~~~p~ 158 (648)
+.+ ++.+++|++||++||+||||||+|||++.......+.++|.+.|++++++|||+||||++|++++. +.++|+
T Consensus 177 ~~~---~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll~~~~~~~~~~~lP~ 253 (756)
T PLN02190 177 PPV---ATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVWENKGGVGDEKEVPH 253 (756)
T ss_pred CCC---CCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccceEEEecCCCCccccccCce
Confidence 532 334579999999999999999999999875555545567889999999999999999999986543 557999
Q ss_pred EEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCC--CcEEEEcCCccccC
Q 006357 159 LIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKE--GDCAFVQSPQYFYD 236 (648)
Q Consensus 159 l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~--~~va~VQ~PQ~f~D 236 (648)
|+||+||||||++||+||||||+++||||++||+|||+|+|||||+|||++++++||||+|++. +++||||+||+|||
T Consensus 254 LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F~D 333 (756)
T PLN02190 254 LVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFYD 333 (756)
T ss_pred EEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCchhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999998763 58999999999999
Q ss_pred hhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCC--CCCccchhhhhhcCCcHHHHHHHH
Q 006357 237 SPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINS--VNGQVGGELLQKSGNSKEFIKSAV 314 (648)
Q Consensus 237 ~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~fG~s~~~~~s~~ 314 (648)
+|+|++++||++.++|+||+|||+|+||||+|||+||||.+|++.+...+.... .......+..++||+|++|++|+.
T Consensus 334 ~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s~~ 413 (756)
T PLN02190 334 SNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAREFGNSKEMVKSVV 413 (756)
T ss_pred ccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccccccccccccccccchhhhhhhcCCcHHHHHHHH
Confidence 999999999999999999999999999999999999999987654322110000 001234446688999999999998
Q ss_pred HhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCC
Q 006357 315 DALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSD 394 (648)
Q Consensus 315 ~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~t 394 (648)
...++.... ..+.++.+++|++|++|+||++|+||+|+||.|+|+|||+.||++||++||||+||+|+++++.|.+|++
T Consensus 414 ~~~~~~~~~-~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~ 492 (756)
T PLN02190 414 DALQRKPNP-QNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPG 492 (756)
T ss_pred HHhccCCCC-ccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCCC
Confidence 776554432 2234678999999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccccCchhH
Q 006357 395 LPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPG 474 (648)
Q Consensus 395 l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p~~~~~~ 474 (648)
+.+.++||+||++|++|++++++||++.+..++|++.||++|++.++ |+.++++++|+++|++||++|.+++|.. ++
T Consensus 493 l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l~Y~~lP~l~Ll~g~~i~P~~--~~ 569 (756)
T PLN02190 493 GPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCLLHNSALFPKG--VY 569 (756)
T ss_pred hHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccccCc--cH
Confidence 99999999999999999999999999875458999999999999977 9999999999999999999999999964 67
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCC---------
Q 006357 475 ICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQ--------- 545 (648)
Q Consensus 475 ~~~~~~~~~~~~~~~ll~~~~~G~~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~--------- 545 (648)
+++++.+++++++++++|++|+|.++++|||+||||+|.++++|++|++++++|+||+++.+|+||+|..+
T Consensus 570 ~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~~~~ 649 (756)
T PLN02190 570 LGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKKTMPETKSGSGSG 649 (756)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEeeccccccccccccc
Confidence 78888888899999999999999999999999999999999999999999999999999999999999754
Q ss_pred ----C-CCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHhhcccC----CCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 006357 546 ----S-SDGGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQ----GGQGPGLGEYFCSVYVVLCFSPFLLGLF 616 (648)
Q Consensus 546 ----~-~~~~~~~~~~~f~~s~l~~P~~~l~~l~l~al~~g~~~~~~~----~~~~~~~~~l~~~~~~v~~l~p~~~al~ 616 (648)
+ +.++|++|+|+|+|+++++|.++++++|++|+++|++++... ++.+..++++++|+|+|++++||++||+
T Consensus 650 ~~~~~~~~~~~~~~~f~f~~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~~~~l~q~~~~~~vv~~~~P~~~gl~ 729 (756)
T PLN02190 650 PSQGEDDGPNSDSGKFEFDGSLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGGGSGLAEACGCILVVMLFLPFLKGLF 729 (756)
T ss_pred cccccccchhhhcceeEecceehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccccHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 124577899999999999999999999999999999887542 1223445999999999999999999999
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHhhh
Q 006357 617 RKGKNGIPLSTICKSAALALLFLRSCK 643 (648)
Q Consensus 617 ~k~~~~~P~~~~~~s~~~~~~~~~~~~ 643 (648)
|||||+||+|++++|++|+++|+++||
T Consensus 730 ~kdkg~iP~s~~~~s~~l~~~f~~~~~ 756 (756)
T PLN02190 730 EKGKYGIPLSTLSKAAFLAVLFVVFSV 756 (756)
T ss_pred cCCCCCCChhHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999986
No 7
>PLN02189 cellulose synthase
Probab=100.00 E-value=1.5e-171 Score=1463.09 Aligned_cols=640 Identities=36% Similarity=0.628 Sum_probs=586.9
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
||||||||+||||++|+|||||+||+|||+|||+|||||||||++||+||.||++||++||||||||+||||+||+||+.
T Consensus 335 vFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~ 414 (1040)
T PLN02189 335 IFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRAPEFYFSL 414 (1040)
T ss_pred eEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccC----cccccccccccCCCccEEEEecCCCc---cc
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTG----EMAVFSDTERRDHPAIVKVIWENKED---LS 153 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~vl~d~~~~---~~ 153 (648)
+.++.+++.+|+|++||++||++|||||+|||.+.++..+.++.+ ++++|++..++|||+||||++|++++ ++
T Consensus 415 ~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~~~~d~~g 494 (1040)
T PLN02189 415 KVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGHDTEG 494 (1040)
T ss_pred CCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHhcCCCCccccc
Confidence 988788888999999999999999999999999987777766544 45899999999999999999998765 25
Q ss_pred CCCCcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCC-CcEEEEcCCc
Q 006357 154 NGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKE-GDCAFVQSPQ 232 (648)
Q Consensus 154 ~~~p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~-~~va~VQ~PQ 232 (648)
.++|+|+||+||||||++||+||||||+++||||++||||||+|+|||||+|||++|+++||||+||++ +++|||||||
T Consensus 495 ~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflDp~~g~~vAfVQFPQ 574 (1040)
T PLN02189 495 NELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQIGRKVCYVQFPQ 574 (1040)
T ss_pred cccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcCCccCceeEEEeCcc
Confidence 679999999999999999999999999999999999999999999999999999999999999999876 8999999999
Q ss_pred ccc-----ChhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhh------------cccccC------
Q 006357 233 YFY-----DSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIEN------------QGKCIN------ 289 (648)
Q Consensus 233 ~f~-----D~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~------------~~~~~~------ 289 (648)
+|| |+|+|++++||+++|+|+||+|||+||||||+|||+||||.++++... .++..+
T Consensus 575 rF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (1040)
T PLN02189 575 RFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPCFGRRKKKHAKNG 654 (1040)
T ss_pred ccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcccccccccccccchhhhcccccccccccc
Confidence 999 999999999999999999999999999999999999999998753210 000000
Q ss_pred --------------CCCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCCchhHHHHhhhhccccccccccccccccc
Q 006357 290 --------------SVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGW 355 (648)
Q Consensus 290 --------------~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~ 355 (648)
.....+..++.++||.|.+|++|+.....+. ....+..+++++|++|++|+||++|+||+|+||
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~--~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw 732 (1040)
T PLN02189 655 LNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGV--PPSSSPAALLKEAIHVISCGYEDKTDWGLELGW 732 (1040)
T ss_pred cccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCC--CCCCCcHHHHHHHHHhhccccccCCchhhccCe
Confidence 0011234567789999999999987663222 123345678999999999999999999999999
Q ss_pred ccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhhHhhchhHHHHHhhcchhhhhc-cCCCCHHHHH
Q 006357 356 LYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATL-TGKLQFRQCL 434 (648)
Q Consensus 356 ~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~-~~~l~~~qrl 434 (648)
.|+|+|||+.||++||++||||+|++|++.+|.|+||+|+.+++.||+||++|++||+++++||++.++ .++|++.||+
T Consensus 733 ~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~l~QRL 812 (1040)
T PLN02189 733 IYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKGGNLKWLERF 812 (1040)
T ss_pred eccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccCCCCCCHHHHH
Confidence 999999999999999999999999998888999999999999999999999999999999999999754 2679999999
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccccCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccccccchhHHHHHH
Q 006357 435 GYLWLLIWGLRSIPELCYVALPAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVA 514 (648)
Q Consensus 435 ~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~G~~~~~ww~~~r~w~i~~ 514 (648)
+|+++++||+.+++.++|+++|++||++|++++|.++.+++.+|+.++++++++.+++++|+|.++++|||+||+|+|.+
T Consensus 813 ~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~llE~~~sG~s~~~WWrnQq~w~I~~ 892 (1040)
T PLN02189 813 AYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGG 892 (1040)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCccEEEcccCCCCCCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHhhcccCC--CCc
Q 006357 515 TSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQG--GQG 592 (648)
Q Consensus 515 ~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~~~~~~~f~~s~l~~P~~~l~~l~l~al~~g~~~~~~~~--~~~ 592 (648)
+++|++|++++++|+||+++.+|.||+|..+.+ ..+++|+|+|+++++|.++++++|++|+++|+++.+.++ .++
T Consensus 893 ~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~---~~~~ly~f~~s~l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~ 969 (1040)
T PLN02189 893 VSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDD---EFGELYAFKWTTLLIPPTTLLIINIVGVVAGISDAINNGYQSWG 969 (1040)
T ss_pred hHHHHHHHHHHHHHHhccCcccceecccccccc---ccccceeecceeHhHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 999999999999999999999999999987643 346889999999999999999999999999999987644 578
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHHHHhhhccc
Q 006357 593 PGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLSTICKSAALALLFLRSCKMSS 646 (648)
Q Consensus 593 ~~~~~l~~~~~~v~~l~p~~~al~~k~~~~~P~~~~~~s~~~~~~~~~~~~~~~ 646 (648)
.+++++|+++|+++++|||++||++|. +|+|++|++||++++++|+++||++.
T Consensus 970 ~~~~~~~~~~wvv~~~~Pf~kgl~gR~-~r~P~~v~v~s~ll~~~~~l~~v~~~ 1022 (1040)
T PLN02189 970 PLFGKLFFAFWVIVHLYPFLKGLMGRQ-NRTPTIVVIWSVLLASIFSLLWVRID 1022 (1040)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccC-CCCCeeehHHHHHHHHHHHHHHheec
Confidence 899999999999999999999999655 89999999999999999999999864
No 8
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=7.1e-171 Score=1457.92 Aligned_cols=642 Identities=36% Similarity=0.626 Sum_probs=584.6
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
||||||||++|||++|+|||||+||+|||+|||+|||||||||++||+||.||++||++||||||||+||||+||+||+.
T Consensus 291 vFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~YFs~ 370 (1044)
T PLN02915 291 VFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNIEPRAPEFYFSQ 370 (1044)
T ss_pred eEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccC----cccccccccccCCCccEEEEecCCCcc---c
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTG----EMAVFSDTERRDHPAIVKVIWENKEDL---S 153 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~vl~d~~~~~---~ 153 (648)
+.++.+++.+++|++||++||++|||||+|||++.++..+.+..| ++++|++...+|||+||||++|++++. +
T Consensus 371 ~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~d~~g 450 (1044)
T PLN02915 371 KIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEG 450 (1044)
T ss_pred CCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCCCCCCCccceEEeecCCCCccccc
Confidence 988888888899999999999999999999999987644444433 689999999999999999999987652 5
Q ss_pred CCCCcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCC-CcEEEEcCCc
Q 006357 154 NGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKE-GDCAFVQSPQ 232 (648)
Q Consensus 154 ~~~p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~-~~va~VQ~PQ 232 (648)
.++|+||||+||||||++||+||||||+++||||++||+|||+|+|||||+|||+.+|++||||+|+++ +++||||+||
T Consensus 451 ~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQ 530 (1044)
T PLN02915 451 KELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYVQFPQ 530 (1044)
T ss_pred CccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecCCCCCeeEEEeCCc
Confidence 689999999999999999999999999999999999999999999999999999999999999999976 8999999999
Q ss_pred ccc-----ChhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcc------------------ccc-
Q 006357 233 YFY-----DSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQG------------------KCI- 288 (648)
Q Consensus 233 ~f~-----D~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~------------------~~~- 288 (648)
+|+ |+|+|++++||++.++|+||+|||+|+||||+|||+||||.+|+..+... ++.
T Consensus 531 rF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (1044)
T PLN02915 531 RFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGGRRGK 610 (1044)
T ss_pred ccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCccccccccccccccccccccccccccccc
Confidence 999 89999999999999999999999999999999999999999876421000 000
Q ss_pred -----------C-------------------------------------------------CCCCccchhhhhhcCCcHH
Q 006357 289 -----------N-------------------------------------------------SVNGQVGGELLQKSGNSKE 308 (648)
Q Consensus 289 -----------~-------------------------------------------------~~~~~~~~~~~~~fG~s~~ 308 (648)
+ .....+..++.++||+|.+
T Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~ 690 (1044)
T PLN02915 611 SKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPV 690 (1044)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcCCcHH
Confidence 0 0001223456678999999
Q ss_pred HHHHHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCccc
Q 006357 309 FIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFL 388 (648)
Q Consensus 309 ~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~ 388 (648)
|++|+.....|. ..+.+.++++++|++|++|+||++|+||+|+||.|+|+|||+.||++||++||||+|++|++.+|.
T Consensus 691 fi~S~~~~~~~~--~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~AF~ 768 (1044)
T PLN02915 691 FIASTLMEDGGL--PEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFK 768 (1044)
T ss_pred HHHHHHHhhcCC--CCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccccHHHHHHHHHccCCcEEeeCCCcHHhc
Confidence 999998754332 223455678999999999999999999999999999999999999999999999999998888899
Q ss_pred ccCCCCHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccc
Q 006357 389 GCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLP 468 (648)
Q Consensus 389 g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p 468 (648)
|+||+|+.++++||+||++|++||++++++|++.+..++|+++||++|+++++||+.++++++|+++|++||++|++++|
T Consensus 769 GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~~slp~liY~llP~l~LLtG~~i~P 848 (1044)
T PLN02915 769 GSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIP 848 (1044)
T ss_pred CcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 99999999999999999999999999999999965447999999999999999999999999999999999999999999
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCCCCC
Q 006357 469 KVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSD 548 (648)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~G~~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~ 548 (648)
.++.....+|++++++++++++++++|+|.++++|||+||+|+|.++++|++|++++++|+||+++.+|+||+|+.+.++
T Consensus 849 ~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLg~se~~F~VTsK~~d~~~ 928 (1044)
T PLN02915 849 TLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAADDEA 928 (1044)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccCCcceecCCccccch
Confidence 88777777778888999999999999999999999999999999999999999999999999999999999999886442
Q ss_pred CCCCCccccccCCcchHHHHHHHHHHHHHHHHHHhhcccC--CCCchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCchh
Q 006357 549 GGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQ--GGQGPGLGEYFCSVYVVLCFSPFLLGLFRKGKNGIPLS 626 (648)
Q Consensus 549 ~~~~~~~~~f~~s~l~~P~~~l~~l~l~al~~g~~~~~~~--~~~~~~~~~l~~~~~~v~~l~p~~~al~~k~~~~~P~~ 626 (648)
...+++|+|+|+++++|+++++++|++|+++|+++.+.+ +.++.+++++++++|++++++||++||++|+ +|+|++
T Consensus 929 -d~~~ely~F~~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~~~l~~~~wvvv~lyPf~kgLmgR~-~r~P~~ 1006 (1044)
T PLN02915 929 -DEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ-NRTPTI 1006 (1044)
T ss_pred -hhhccceeecceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CCCCee
Confidence 234688999999999999999999999999999998754 3468899999999999999999999999655 799999
Q ss_pred hHHHHHHHHHHHHHhhhccc
Q 006357 627 TICKSAALALLFLRSCKMSS 646 (648)
Q Consensus 627 ~~~~s~~~~~~~~~~~~~~~ 646 (648)
|++||++++++|+++||++.
T Consensus 1007 v~v~s~lla~~~~ll~v~~~ 1026 (1044)
T PLN02915 1007 VVLWSILLASIFSLVWVRID 1026 (1044)
T ss_pred ehHHHHHHHHHHHHHHheec
Confidence 99999999999999999864
No 9
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=6.5e-168 Score=1434.87 Aligned_cols=643 Identities=32% Similarity=0.541 Sum_probs=569.5
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
||||||||+||||++|+|||||+||+|||+|||+|||||||||.+|||||.||++||++||||||||+||||+||+||+.
T Consensus 371 vFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~EAa~FA~~WVPFCrKh~IepRaPe~YFs~ 450 (1135)
T PLN02248 371 VFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAEAASFARIWVPFCRKHDIEPRNPESYFSL 450 (1135)
T ss_pred eEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccc------------c---c---cC---------------cc
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLF------------D---M---TG---------------EM 127 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~------------~---~---~~---------------~~ 127 (648)
+.++.+++.+|+|++||++||+||||||+|||.+.+...+. + . .+ |.
T Consensus 451 ~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~~~~~~~~~~~~~~~e~~~~~~~~wm~dg 530 (1135)
T PLN02248 451 KRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIKAKKKQRESGGGDPSEPLKVPKATWMADG 530 (1135)
T ss_pred CCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHHhhhhhhhhcccccccccccccceeeccC
Confidence 98877788889999999999999999999999986421111 0 0 01 11
Q ss_pred cccc--------cccccCCCccEEEEecCCCcc-----------------cCCCCcEEEEEccCCCCCCCCCchHHHHHH
Q 006357 128 AVFS--------DTERRDHPAIVKVIWENKEDL-----------------SNGLPHLIYISREKRPKHPHHYKAGAMNVL 182 (648)
Q Consensus 128 ~~~~--------~~~~~~~~~~v~vl~d~~~~~-----------------~~~~p~l~Yv~Rekr~g~~~~~KAGaLN~~ 182 (648)
++|+ +++++|||+||||++|+++.+ +.++|+||||+||||||++||+||||||++
T Consensus 531 t~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~~lP~LVYVSREKRPg~~Hh~KAGAMNAL 610 (1135)
T PLN02248 531 THWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNAL 610 (1135)
T ss_pred CcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCcccccccccccccccccceeEEEecccCCCCCcccccchhhhH
Confidence 3332 468999999999999865411 237999999999999999999999999999
Q ss_pred HHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc-----ChhhhhHHHHHHhhhhhhhhcC
Q 006357 183 TRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY-----DSPADSLAILHESLGKGIVGIQ 257 (648)
Q Consensus 183 L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~-----D~~~~~~~~f~~~~~~g~dg~~ 257 (648)
+||||++||||||+|+|||||+|||++|+++||||+|++.+++|||||||+|| |+|+|++++||+++|+|+||+|
T Consensus 611 lRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~g~~vAfVQFPQrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlq 690 (1135)
T PLN02248 611 VRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQ 690 (1135)
T ss_pred HHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCCCCceEEEcCCcccCCCCCCCccCCcceeeeeeeeccccccC
Confidence 99999999999999999999999999999999999998778999999999999 9999999999999999999999
Q ss_pred CcccccccceeehhhhhccCcchhhhcc---------cccC---C------------CCCccchhhhhhcCCcHHHHHHH
Q 006357 258 GPFYAGTGTFHRRKVIYGLWPDEIENQG---------KCIN---S------------VNGQVGGELLQKSGNSKEFIKSA 313 (648)
Q Consensus 258 g~~~~Gtg~~~RR~aL~g~~~~~~~~~~---------~~~~---~------------~~~~~~~~~~~~fG~s~~~~~s~ 313 (648)
||+||||||+|||+||||.+|++..... +... . ....+...+.++||+|..|++|.
T Consensus 691 GP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rfG~S~~fi~S~ 770 (1135)
T PLN02248 691 GPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPKRFGNSTMFAASI 770 (1135)
T ss_pred CccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccchhhhhhh
Confidence 9999999999999999999887542110 0000 0 00122334567899999999999
Q ss_pred HHhh-cCCCCC----------------C-CCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCc
Q 006357 314 VDAL-EGKNTG----------------F-SSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGW 375 (648)
Q Consensus 314 ~~~~-~g~~~~----------------~-~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gw 375 (648)
..+. +|.... + .....+++++|++|++|+||++|+||+|+||.|+|+|||+.||++||++||
T Consensus 771 ~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTEDv~TGlrLH~rGW 850 (1135)
T PLN02248 771 PVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGW 850 (1135)
T ss_pred HHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceechHHHHHHHHhcCC
Confidence 6654 232220 1 112335789999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCcccccCCCCHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHH
Q 006357 376 KTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVAL 455 (648)
Q Consensus 376 rs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~ 455 (648)
||+||+|++.+|.|+||+|+.++++||+||++|++||++++++|++.+ ++|++.||++|++.++||+.+++.++|+++
T Consensus 851 rSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~--~~Lsl~QRL~Yl~~~lypf~Slp~liY~ll 928 (1135)
T PLN02248 851 RSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--RRLKFLQRIAYLNVGIYPFTSIFLIVYCFL 928 (1135)
T ss_pred ceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888899999999999999999999999999999999999875 799999999999999999999999999999
Q ss_pred HHHHHHhcCCccccCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 006357 456 PAYCIITNTSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSET 535 (648)
Q Consensus 456 P~l~l~~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~G~~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~ 535 (648)
|++||++|++++|+.+..++.++++++++++++++++++|+|.++++|||+||+|+|.++++|++|++++++|+|++++.
T Consensus 929 P~l~LLtGi~~~p~~~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~ 1008 (1135)
T PLN02248 929 PALSLFSGQFIVQTLNVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEI 1008 (1135)
T ss_pred HHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccc
Confidence 99999999999998755444555466788899999999999999999999999999999999999999999999999999
Q ss_pred cEEEcccCCCCCCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHhhcccC--CCCchhHHHHHHHHHHHHHHHHHHH
Q 006357 536 VFEITKKVHQSSDGGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQ--GGQGPGLGEYFCSVYVVLCFSPFLL 613 (648)
Q Consensus 536 ~F~VTpK~~~~~~~~~~~~~~~f~~s~l~~P~~~l~~l~l~al~~g~~~~~~~--~~~~~~~~~l~~~~~~v~~l~p~~~ 613 (648)
+|+||+|+.+.+.++.+++.|+|+|+++++|+++++++|++|+++|++|++.+ +.++.+++++|+++|+++++|||++
T Consensus 1009 ~F~VTsK~~~~d~~~~~a~ly~f~wS~L~iP~ttl~llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~k 1088 (1135)
T PLN02248 1009 SFTLTSKSAGDDEDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAK 1088 (1135)
T ss_pred cceeCCcccccccccccchheecCcchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999876543334789999999999999999999999999999999765 3457889999999999999999999
Q ss_pred HHhccCCCCCchhhHHHHHHHHHHHHHhhhccc
Q 006357 614 GLFRKGKNGIPLSTICKSAALALLFLRSCKMSS 646 (648)
Q Consensus 614 al~~k~~~~~P~~~~~~s~~~~~~~~~~~~~~~ 646 (648)
||++| ++|+|++|++||++++++++++||.+.
T Consensus 1089 GL~gR-~gr~P~iv~v~s~ll~~~~sll~v~~~ 1120 (1135)
T PLN02248 1089 GLMGR-RGRTPTIVYVWSGLLSITISLLWVAIS 1120 (1135)
T ss_pred HHhcc-CCCCCeehHHHHHHHHHHHHHHheEec
Confidence 99966 789999999999999999999999875
No 10
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=1.3e-163 Score=1374.77 Aligned_cols=605 Identities=35% Similarity=0.599 Sum_probs=550.4
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
||||||||+||||++|+|||||+||+|||+||++|||||||||++||++|.||++|||+||||||||+||||+||+||+.
T Consensus 105 vfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvPFCrk~~ie~R~P~~YF~~ 184 (734)
T PLN02893 105 VFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYFSS 184 (734)
T ss_pred eeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhcc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcccccc-------ccCcccccc-cccccCCCccEEEEecCCCcc
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFD-------MTGEMAVFS-DTERRDHPAIVKVIWENKEDL 152 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~v~vl~d~~~~~ 152 (648)
+. +++.+||++||+||||||+|||++.++....+ ..+++++|. +++++|||+||||++|++++.
T Consensus 185 ~~--------~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l~~~~~~ 256 (734)
T PLN02893 185 NS--------HSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKDK 256 (734)
T ss_pred CC--------CccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCCceeeeeccCCCcc
Confidence 73 35789999999999999999999876522211 124578895 578999999999999997543
Q ss_pred ---cCCCCcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCC-CcEEEE
Q 006357 153 ---SNGLPHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKE-GDCAFV 228 (648)
Q Consensus 153 ---~~~~p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~-~~va~V 228 (648)
+.++|+|+|++||||||++||+||||||+++|+|+++||||||+|+||||++|+|++|+++||||+||++ +++|||
T Consensus 257 d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~vafV 336 (734)
T PLN02893 257 DITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYV 336 (734)
T ss_pred chhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceEEE
Confidence 5579999999999999999999999999999999999999999999999998899999999999999865 899999
Q ss_pred cCCcccc-----ChhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhc
Q 006357 229 QSPQYFY-----DSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKS 303 (648)
Q Consensus 229 Q~PQ~f~-----D~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f 303 (648)
||||+|+ |+|+|++++||+++|+|+||+|||+||||||++||+||||..+..... ....+
T Consensus 337 QfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~---------------~~~~~ 401 (734)
T PLN02893 337 QFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILP---------------EIPEL 401 (734)
T ss_pred eCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccccch---------------hhhhc
Confidence 9999999 899999999999999999999999999999999999999975421100 00011
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCC
Q 006357 304 GNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPD 383 (648)
Q Consensus 304 G~s~~~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~ 383 (648)
+.+....+ .....+.+++|++|++|+||++|.||+++||.|+|+|||+.||++||++||||+||+|+
T Consensus 402 ~~~~~~~~-------------~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~ 468 (734)
T PLN02893 402 NPDHLVDK-------------SIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPK 468 (734)
T ss_pred cccccccc-------------ccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCC
Confidence 11000000 11234578899999999999999999999999999999999999999999999999987
Q ss_pred CCcccccCCCCHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Q 006357 384 PHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITN 463 (648)
Q Consensus 384 ~~a~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g 463 (648)
+.++.|++|+|+.++++||+||++|++|++++++||++.+ .++|++.||++|++.++||+.++++++|+++|++||++|
T Consensus 469 ~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g-~~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l~Ll~g 547 (734)
T PLN02893 469 RPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFG-VKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNG 547 (734)
T ss_pred chhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhc-ccCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 7788999999999999999999999999999999999975 378999999999999999999999999999999999999
Q ss_pred CCccccCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccC
Q 006357 464 TSFLPKVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKV 543 (648)
Q Consensus 464 ~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~G~~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~ 543 (648)
++++|+++.++++++++++++++++++++++++|.++++|||+||+|+|.++++|++|++++++|.||+++.+|+||+|+
T Consensus 548 ~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~ 627 (734)
T PLN02893 548 VSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKV 627 (734)
T ss_pred CcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-CCCCCccccccC-CcchHHHHHHHHHHHHHHHHHHhhcccCCCCchhHHHHHHHHHHHHHHHHHHHHHh-ccCC
Q 006357 544 HQSSD-GGKDGKELLFDE-SPFFVPGTTILLVHLAALATGLLGMQPQGGQGPGLGEYFCSVYVVLCFSPFLLGLF-RKGK 620 (648)
Q Consensus 544 ~~~~~-~~~~~~~~~f~~-s~l~~P~~~l~~l~l~al~~g~~~~~~~~~~~~~~~~l~~~~~~v~~l~p~~~al~-~k~~ 620 (648)
.+.++ +++++|.|+|++ +++++|+++++++|++|+++|+++++.++++++++++++|++|++++++|+++||+ ||||
T Consensus 628 ~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dk 707 (734)
T PLN02893 628 VDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDD 707 (734)
T ss_pred cccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 77654 667789999995 99999999999999999999999998776678889999999999999999999998 9999
Q ss_pred CCCchhhHHHHHHHHHHHHHhh
Q 006357 621 NGIPLSTICKSAALALLFLRSC 642 (648)
Q Consensus 621 ~~~P~~~~~~s~~~~~~~~~~~ 642 (648)
|+||++|++||++|++++|++.
T Consensus 708 g~~P~~v~~~s~~l~~~~~~~~ 729 (734)
T PLN02893 708 GKLPVKITLISIVLAWALYLAS 729 (734)
T ss_pred CCCCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999998764
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=4e-61 Score=559.54 Aligned_cols=425 Identities=22% Similarity=0.316 Sum_probs=337.9
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|+|.| ||||+.++.+|+.|++++|||++|++|||+|||++|.|.....
T Consensus 135 ViIP~---yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~----------------------------- 182 (713)
T TIGR03030 135 VFIPT---YNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPD----------------------------- 182 (713)
T ss_pred EEEcC---CCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccch-----------------------------
Confidence 46777 9999999999999999999999999999999999997622111
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
+..+|..+ ..+++++-.++ .++.
T Consensus 183 -----------~~~~~~~~---~~~~~~~l~~~-------------------------------------------~~v~ 205 (713)
T TIGR03030 183 -----------PEQAEAAQ---RREELKEFCRK-------------------------------------------LGVN 205 (713)
T ss_pred -----------hhhhhhhh---hHHHHHHHHHH-------------------------------------------cCcE
Confidence 11111110 11222211111 4578
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc--Chh
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY--DSP 238 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~--D~~ 238 (648)
|++|++ |+|+||||||+|++ .++||||+++|||++ |+||+|++++++|.+ ++++|+||+||.|+ |++
T Consensus 206 yi~r~~----n~~~KAgnLN~al~----~a~gd~Il~lDAD~v-~~pd~L~~~v~~f~~--dp~v~~Vqtp~~f~~p~~~ 274 (713)
T TIGR03030 206 YITRPR----NVHAKAGNINNALK----HTDGELILIFDADHV-PTRDFLQRTVGWFVE--DPKLFLVQTPHFFVSPDPI 274 (713)
T ss_pred EEECCC----CCCCChHHHHHHHH----hcCCCEEEEECCCCC-cChhHHHHHHHHHHh--CCCEEEEeCCeeccCCCHH
Confidence 999988 66799999999999 689999999999998 799999999999963 37899999999998 443
Q ss_pred h----------hhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHH
Q 006357 239 A----------DSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKE 308 (648)
Q Consensus 239 ~----------~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~ 308 (648)
. ++...||+.++.|+|.++++++||+++++||+++.
T Consensus 275 ~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~---------------------------------- 320 (713)
T TIGR03030 275 ERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALD---------------------------------- 320 (713)
T ss_pred hhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHH----------------------------------
Confidence 2 34568999999999999999999999999999982
Q ss_pred HHHHHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCccc
Q 006357 309 FIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFL 388 (648)
Q Consensus 309 ~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~ 388 (648)
++ |||++++++||++++++|+++||+++|++ ++.+ .
T Consensus 321 ----------------------------~i--------------GGf~~~~vtED~~l~~rL~~~G~~~~y~~-~~~~-~ 356 (713)
T TIGR03030 321 ----------------------------EI--------------GGIAGETVTEDAETALKLHRRGWNSAYLD-RPLI-A 356 (713)
T ss_pred ----------------------------Hc--------------CCCCCCCcCcHHHHHHHHHHcCCeEEEec-cccc-c
Confidence 45 48999999999999999999999999996 5544 8
Q ss_pred ccCCCCHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccc
Q 006357 389 GCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLP 468 (648)
Q Consensus 389 g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p 468 (648)
|++|+|++++++||.||++|++|+++ ..+|++. +++++.||++|+++++|++.+++.++|+++|++++++|+++++
T Consensus 357 g~~p~sl~~~~~Qr~RWa~G~~qi~~-~~~pl~~---~gl~~~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~ 432 (713)
T TIGR03030 357 GLAPETLSGHIGQRIRWAQGMMQIFR-LDNPLLK---RGLSFPQRLCYLNAMLFWFFPLPRVIFLTAPLAYLFFGLNIFV 432 (713)
T ss_pred ccCCCCHHHHHHHHHHHhcChHHHHh-hhCcccc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccee
Confidence 99999999999999999999999997 5588876 7999999999999999999999999999999999999999888
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHH-HhcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCCCC
Q 006357 469 KVQEPGICIAVAIFVIYKLYTLSEY-IHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSS 547 (648)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~ll~~-~~~G~~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~ 547 (648)
+.... ++ ..++++++.+++.+ ...|.....||++ .+..+.++ +.+..++.+.+++++.+|+||||++..+
T Consensus 433 ~~~~~---~~-~~~lp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~F~VT~Kg~~~~ 503 (713)
T TIGR03030 433 ASALE---IL-AYALPHMLHSLLTNSYLFGRVRWPFWSE----VYETVLAV-YLLPPVLVTLLNPKKPKFNVTPKGELLD 503 (713)
T ss_pred CCHHH---HH-HHHHHHHHHHHHHHHHHcCCeecchHHH----HHHHHHHH-HHHHHHHHHHhCcCCCCceecCCCcccc
Confidence 63222 22 22345555555543 3345444567753 23333344 5666677778899999999999998754
Q ss_pred CCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHhhcccCC-CCchhHHHHHHHHHHHHHHHHHHHHHh-ccCCCCCch
Q 006357 548 DGGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQG-GQGPGLGEYFCSVYVVLCFSPFLLGLF-RKGKNGIPL 625 (648)
Q Consensus 548 ~~~~~~~~~~f~~s~l~~P~~~l~~l~l~al~~g~~~~~~~~-~~~~~~~~l~~~~~~v~~l~p~~~al~-~k~~~~~P~ 625 (648)
.. . + +++++|+++++++|++|+++|+++...++ ..+.+.++++|+.|+++++...+.+.+ |+++++.|+
T Consensus 504 ~~-----~--~--~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~~~R 574 (713)
T TIGR03030 504 ED-----Y--F--SPLSRPYLILFALILAGLAFGLYRIYGYPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRSSPR 574 (713)
T ss_pred cc-----c--c--chHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCccc
Confidence 21 1 2 37899999999999999999999986433 235678999999999999999888888 666555444
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=2.7e-61 Score=560.01 Aligned_cols=402 Identities=22% Similarity=0.310 Sum_probs=324.8
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|+|+| ||||..++.+|+.|++++|||.+|++|||+|||++|.| .++++
T Consensus 264 ViIPt---YNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t-------~~la~---------------------- 311 (852)
T PRK11498 264 IFVPT---YNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEF-------RQFAQ---------------------- 311 (852)
T ss_pred EEEec---CCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHH-------HHHHH----------------------
Confidence 56777 99999999999999999999999999999999998843 11111
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
+ .++.
T Consensus 312 --------------------------------~-------------------------------------------~~v~ 316 (852)
T PRK11498 312 --------------------------------E-------------------------------------------VGVK 316 (852)
T ss_pred --------------------------------H-------------------------------------------CCcE
Confidence 0 2367
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc--Chh
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY--DSP 238 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~--D~~ 238 (648)
|++|++ |.|+||||+|+|++ .++||||+++|||++ |+||+|++++++|.+ +|++|+||+||.|+ |++
T Consensus 317 yI~R~~----n~~gKAGnLN~aL~----~a~GEyIavlDAD~i-p~pdfL~~~V~~f~~--dP~VglVQtp~~f~n~dp~ 385 (852)
T PRK11498 317 YIARPT----HEHAKAGNINNALK----YAKGEFVAIFDCDHV-PTRSFLQMTMGWFLK--DKKLAMMQTPHHFFSPDPF 385 (852)
T ss_pred EEEeCC----CCcchHHHHHHHHH----hCCCCEEEEECCCCC-CChHHHHHHHHHHHh--CCCeEEEEcceeccCCchH
Confidence 888887 55799999999999 689999999999997 799999999999863 48899999999998 554
Q ss_pred h----------hhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHH
Q 006357 239 A----------DSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKE 308 (648)
Q Consensus 239 ~----------~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~ 308 (648)
. ++.+.||+.++.|.|.++++++||+++++||+++.
T Consensus 386 ~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLe---------------------------------- 431 (852)
T PRK11498 386 ERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLD---------------------------------- 431 (852)
T ss_pred HHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHH----------------------------------
Confidence 3 34568999999999999999999999999999982
Q ss_pred HHHHHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCccc
Q 006357 309 FIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFL 388 (648)
Q Consensus 309 ~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~ 388 (648)
++ |||+++++|||+++++++|++||+++|++ ++.+ .
T Consensus 432 ----------------------------eV--------------GGfd~~titED~dlslRL~~~Gyrv~yl~-~~~a-~ 467 (852)
T PRK11498 432 ----------------------------EI--------------GGIAVETVTEDAHTSLRLHRRGYTSAYMR-IPQA-A 467 (852)
T ss_pred ----------------------------Hh--------------cCCCCCccCccHHHHHHHHHcCCEEEEEe-ccce-e
Confidence 45 49999999999999999999999999996 5555 7
Q ss_pred ccCCCCHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccc
Q 006357 389 GCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLP 468 (648)
Q Consensus 389 g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p 468 (648)
|++|+|+.++++||.||++|++|+++ +++|++. +++++.||++|+++++|++.+++.++|+++|++|+++|+.++.
T Consensus 468 glaPesl~~~~~QR~RWarG~lQi~r-~~~pl~~---~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l~~gi~~i~ 543 (852)
T PRK11498 468 GLATESLSAHIGQRIRWARGMVQIFR-LDNPLTG---KGLKLAQRLCYANAMLHFLSGIPRLIFLTAPLAFLLLHAYIIY 543 (852)
T ss_pred EECCCCHHHHHHHHHHHHHHHHHHHH-HhChhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhee
Confidence 99999999999999999999999997 6789886 8999999999999999999999999999999999999998775
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHH-HhcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCCCC
Q 006357 469 KVQEPGICIAVAIFVIYKLYTLSEY-IHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSS 547 (648)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~ll~~-~~~G~~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~ 547 (648)
+. ...++.+ ++++++...+.. ...|.....||++ .+..+.++..+.. .+..++++++.+|+||||++..+
T Consensus 544 a~---~~~i~~y-~lP~~~~~~l~~~~~~g~~r~~~wse----iye~v~a~~l~~~-~~~~ll~p~~~~F~VTpKg~~~~ 614 (852)
T PRK11498 544 AP---ALMIALF-VLPHMIHASLTNSRIQGKYRHSFWSE----IYETVLAWYIAPP-TTVALFNPHKGKFNVTAKGGLVE 614 (852)
T ss_pred CC---hHHHHHH-HHHHHHHHHHHHHHhcCcchHhHHHH----HHHHHHHHHHHHH-HHHHHcCccCCCcccCCCCcccc
Confidence 42 2222222 233333333322 2333322334432 2455566655544 34447899999999999997754
Q ss_pred CCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHhhcccCC--CCchhHHHHHHHHHHHHHHHHHHHHHh-ccC
Q 006357 548 DGGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQG--GQGPGLGEYFCSVYVVLCFSPFLLGLF-RKG 619 (648)
Q Consensus 548 ~~~~~~~~~~f~~s~l~~P~~~l~~l~l~al~~g~~~~~~~~--~~~~~~~~l~~~~~~v~~l~p~~~al~-~k~ 619 (648)
++.|+| .+..|+++++++|++|+++|+++...+. +.....++++|++|+++++...+...+ +++
T Consensus 615 -----~~~~~~---~~~~P~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~ 681 (852)
T PRK11498 615 -----EEYVDW---VISRPYIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVESKQ 681 (852)
T ss_pred -----ccceeh---HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 234554 5778999999999999999999986543 235677999999999999999988888 444
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=9.8e-34 Score=325.93 Aligned_cols=214 Identities=18% Similarity=0.222 Sum_probs=165.9
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc-
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY- 235 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~- 235 (648)
+++.|.+|++ |.|+||||+|.+++.++ .++|||+++|||++ +++|+|++++++|.. ||++|+||+|+.++
T Consensus 192 ~~i~yr~R~~----n~~~KaGNl~~~~~~~~--~~~eyivvLDADs~-m~~d~L~~lv~~m~~--dP~vGlVQt~~~~~n 262 (691)
T PRK05454 192 GRIFYRRRRR----NVGRKAGNIADFCRRWG--GAYDYMVVLDADSL-MSGDTLVRLVRLMEA--NPRAGLIQTLPVAVG 262 (691)
T ss_pred CcEEEEECCc----CCCccHHHHHHHHHhcC--CCcCEEEEEcCCCC-CCHHHHHHHHHHHhh--CcCEEEEeCCccCcC
Confidence 6789999988 56799999999999655 68899999999987 699999999999962 47899999999988
Q ss_pred -Ch-hhh----hHHHHHHhhhhhhhhcC--CcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcH
Q 006357 236 -DS-PAD----SLAILHESLGKGIVGIQ--GPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSK 307 (648)
Q Consensus 236 -D~-~~~----~~~~f~~~~~~g~dg~~--g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~ 307 (648)
|. ++. ...++......|++.++ ...|+|+|+++||+++....
T Consensus 263 ~~slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~------------------------------ 312 (691)
T PRK05454 263 ADTLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHC------------------------------ 312 (691)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhc------------------------------
Confidence 32 222 12344445677888766 35689999999999984110
Q ss_pred HHHHHHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcc
Q 006357 308 EFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAF 387 (648)
Q Consensus 308 ~~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~ 387 (648)
|.+ .+. ..+||..++++||++++.+|+++|||++|++ +...+
T Consensus 313 -----------glp---------------~L~-----------g~~p~~~~~LseD~~~a~~l~~~GyrV~~~p-d~~~~ 354 (691)
T PRK05454 313 -----------GLP---------------PLP-----------GRGPFGGHILSHDFVEAALMRRAGWGVWLAP-DLPGS 354 (691)
T ss_pred -----------CCc---------------ccc-----------ccCCCCCCcccHHHHHHHHHHHCCCEEEEcC-ccccc
Confidence 000 010 0258989999999999999999999999996 53335
Q ss_pred cccCCCCHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHH
Q 006357 388 LGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVA 454 (648)
Q Consensus 388 ~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~ 454 (648)
++++|+|+.++++||.||++|++|++. . ++. +++++.+|++|++++..++.+...+++++
T Consensus 355 ~ee~P~tl~~~~~qr~RW~~G~lQ~l~-~---l~~---~gl~~~~R~~~l~g~~~yl~~P~wll~l~ 414 (691)
T PRK05454 355 YEELPPNLLDELKRDRRWCQGNLQHLR-L---LLA---KGLHPVSRLHFLTGIMSYLSAPLWLLFLL 414 (691)
T ss_pred cccCCCCHHHHHHHHHHHHhchHHHHH-H---HHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999974 1 332 78999999999987766665544433333
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=1.8e-34 Score=297.62 Aligned_cols=178 Identities=16% Similarity=0.296 Sum_probs=144.0
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc-
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY- 235 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~- 235 (648)
++++|++|+++ .|+||||||+++...+ +++|||+++|||+. ++|++|++++.+|.. +|++|+||+||.++
T Consensus 67 ~~v~~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~-~~p~~l~~~v~~~~~--~~~vg~vq~~~~~~n 137 (254)
T cd04191 67 GRIYYRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSL-MSGDTIVRLVRRMEA--NPRAGIIQTAPKLIG 137 (254)
T ss_pred CcEEEEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCC-CCHHHHHHHHHHHHh--CCCEEEEeCCceeEC
Confidence 78999999994 4599999999998432 78999999999987 799999999999972 38899999999998
Q ss_pred -Chhhh-----hHHHHHHhhhhhhhhcCC--cccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcH
Q 006357 236 -DSPAD-----SLAILHESLGKGIVGIQG--PFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSK 307 (648)
Q Consensus 236 -D~~~~-----~~~~f~~~~~~g~dg~~g--~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~ 307 (648)
|.+.+ +...|...++.|++.+++ .+++|++.++||++|....
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~------------------------------ 187 (254)
T cd04191 138 AETLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHC------------------------------ 187 (254)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhc------------------------------
Confidence 43322 234566677888887654 5789999999999984210
Q ss_pred HHHHHHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcc
Q 006357 308 EFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAF 387 (648)
Q Consensus 308 ~~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~ 387 (648)
|. .++|| -+||..++++||+++|++++.+||+++|.+ +..++
T Consensus 188 -----------~~---------------~~i~g-----------~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~-~~~~~ 229 (254)
T cd04191 188 -----------AL---------------PVLPG-----------RPPFGGHILSHDFVEAALMRRAGWEVRLAP-DLEGS 229 (254)
T ss_pred -----------CC---------------ccccC-----------CCCCCCCeecHHHHHHHHHHHcCCEEEEcc-CCcce
Confidence 00 01221 148888999999999999999999999995 44444
Q ss_pred cccCCCCHHHHHHHhhHhhchhHH
Q 006357 388 LGCGPSDLPAAMRQQKRWAMGLLE 411 (648)
Q Consensus 388 ~g~aP~tl~~~~~Qr~RWa~G~~q 411 (648)
++++|+|++++++||.||++|++|
T Consensus 230 ~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 230 YEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred EeECCCCHHHHHHHHHHHHhhcCc
Confidence 799999999999999999999987
No 15
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.98 E-value=4.1e-30 Score=285.21 Aligned_cols=220 Identities=18% Similarity=0.157 Sum_probs=174.3
Q ss_pred CCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCCCCCCCCC
Q 006357 9 ELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGESAKPPST 88 (648)
Q Consensus 9 ~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~~~~~~~~ 88 (648)
|||+.. +.+|+.|+++++|| +++++|+|||++|.|.+.+.+..+
T Consensus 84 yNE~~~-i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~~~~--------------------------------- 127 (444)
T PRK14583 84 FNEGLN-ARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDALLA--------------------------------- 127 (444)
T ss_pred CCCHHH-HHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHHHHH---------------------------------
Confidence 888865 78999999999999 699999999999977444333110
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEEEEccCCC
Q 006357 89 SSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISREKRP 168 (648)
Q Consensus 89 ~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Yv~Rekr~ 168 (648)
+.|++.++.++++
T Consensus 128 ------------------------------------------------------------------~~~~v~vv~~~~n- 140 (444)
T PRK14583 128 ------------------------------------------------------------------EDPRLRVIHLAHN- 140 (444)
T ss_pred ------------------------------------------------------------------hCCCEEEEEeCCC-
Confidence 0144555655442
Q ss_pred CCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccC---hhh----hh
Q 006357 169 KHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYD---SPA----DS 241 (648)
Q Consensus 169 g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D---~~~----~~ 241 (648)
.+||+|+|.|++ .+++|+++++|||+. ++||+|++++..|.+ ++++|.||+.+...+ ..+ .+
T Consensus 141 ----~Gka~AlN~gl~----~a~~d~iv~lDAD~~-~~~d~L~~lv~~~~~--~~~~g~v~g~~~~~~~~~~~~~~~~~e 209 (444)
T PRK14583 141 ----QGKAIALRMGAA----AARSEYLVCIDGDAL-LDKNAVPYLVAPLIA--NPRTGAVTGNPRIRTRSTLIGRVQVGE 209 (444)
T ss_pred ----CCHHHHHHHHHH----hCCCCEEEEECCCCC-cCHHHHHHHHHHHHh--CCCeEEEEccceecCCCcchhhHHHHH
Confidence 259999999999 689999999999997 799999999999864 478999999776551 121 23
Q ss_pred HHHHHHhhhhhhhhcCCccc-ccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcCC
Q 006357 242 LAILHESLGKGIVGIQGPFY-AGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGK 320 (648)
Q Consensus 242 ~~~f~~~~~~g~dg~~g~~~-~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~ 320 (648)
...+++.+.++.+..+..+. .|+++.+||+++
T Consensus 210 ~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al----------------------------------------------- 242 (444)
T PRK14583 210 FSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRAL----------------------------------------------- 242 (444)
T ss_pred HHHHHHHHHHHHHHhCCceEecCceeEEEHHHH-----------------------------------------------
Confidence 44566667777777776665 588889999988
Q ss_pred CCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHH
Q 006357 321 NTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMR 400 (648)
Q Consensus 321 ~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~ 400 (648)
+++ |||+.++++||+++++|++.+||++.|++ +.. +++++|+|++++++
T Consensus 243 ---------------~~v--------------Gg~~~~~i~ED~dl~~rl~~~G~~i~~~p-~a~-~~~~~p~t~~~~~~ 291 (444)
T PRK14583 243 ---------------ADV--------------GYWSPDMITEDIDISWKLQLKHWSVFFEP-RGL-CWILMPETLRGLWK 291 (444)
T ss_pred ---------------HHc--------------CCCCCCcccccHHHHHHHHHcCCeEEEee-ccE-EeeeCCCCHHHHHH
Confidence 245 48999999999999999999999999995 544 58999999999999
Q ss_pred HhhHhhchhHHHHHhhcchh
Q 006357 401 QQKRWAMGLLEILLSEHSPI 420 (648)
Q Consensus 401 Qr~RWa~G~~qi~~~~~~pl 420 (648)
||.||++|.+|+++++...+
T Consensus 292 Qr~RW~~G~~~~~~~~~~~~ 311 (444)
T PRK14583 292 QRLRWAQGGAEVFLKNMFKL 311 (444)
T ss_pred HHHHHhCcHHHHHHHHHHHH
Confidence 99999999999998544344
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.97 E-value=1.7e-30 Score=285.52 Aligned_cols=222 Identities=27% Similarity=0.374 Sum_probs=171.4
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCC
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGE 81 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~ 81 (648)
+|.+ |||++..+.+|+.|++++||| +++|+|+|||++|-|.+-+.|..+
T Consensus 59 iiP~---ynE~~~~~~~~l~s~~~~dyp--~~evivv~d~~~d~~~~~~~~~~~-------------------------- 107 (439)
T COG1215 59 IIPA---YNEEPEVLEETLESLLSQDYP--RYEVIVVDDGSTDETYEILEELGA-------------------------- 107 (439)
T ss_pred EEec---CCCchhhHHHHHHHHHhCCCC--CceEEEECCCCChhHHHHHHHHHh--------------------------
Confidence 4555 999999999999999999999 699999999999976444444211
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEE
Q 006357 82 SAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIY 161 (648)
Q Consensus 82 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Y 161 (648)
+|. |++..
T Consensus 108 ---------------------~~~---------------------------------------------------~~~~~ 115 (439)
T COG1215 108 ---------------------EYG---------------------------------------------------PNFRV 115 (439)
T ss_pred ---------------------hcC---------------------------------------------------cceEE
Confidence 000 11111
Q ss_pred EEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccChh-hh
Q 006357 162 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSP-AD 240 (648)
Q Consensus 162 v~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~~-~~ 240 (648)
+..++ ++++|+||+|.++. .+++|+|+++|||+. |+||+|++++++|.|+ +.+|.+|+|+.+..++ .+
T Consensus 116 ~~~~~----~~~gK~~al~~~l~----~~~~d~V~~~DaD~~-~~~d~l~~~~~~f~~~--~~~~v~~~~~~~~~~~~~~ 184 (439)
T COG1215 116 IYPEK----KNGGKAGALNNGLK----RAKGDVVVILDADTV-PEPDALRELVSPFEDP--PVGAVVGTPRIRNRPDPSN 184 (439)
T ss_pred Eeccc----cCccchHHHHHHHh----hcCCCEEEEEcCCCC-CChhHHHHHHhhhcCC--CeeEEeCCceeeecCChhh
Confidence 11122 45789999999999 688999999999987 7999999999999863 5668999998777221 21
Q ss_pred ----h-----HHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHH
Q 006357 241 ----S-----LAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIK 311 (648)
Q Consensus 241 ----~-----~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~ 311 (648)
. ...++.....+.+.....+++|++..+||++|.
T Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~------------------------------------- 227 (439)
T COG1215 185 LLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALE------------------------------------- 227 (439)
T ss_pred hcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHH-------------------------------------
Confidence 1 112222222233333567789999999999982
Q ss_pred HHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccC
Q 006357 312 SAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCG 391 (648)
Q Consensus 312 s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~a 391 (648)
++ |||...++|||.++++++|.+|||+.|++ ++ .+++++
T Consensus 228 -------------------------~~--------------g~~~~~~i~ED~~lt~~l~~~G~~~~~~~-~~-~~~~~~ 266 (439)
T COG1215 228 -------------------------EV--------------GGWLEDTITEDADLTLRLHLRGYRVVYVP-EA-IVWTEA 266 (439)
T ss_pred -------------------------Hh--------------CCCCCCceeccHHHHHHHHHCCCeEEEee-cc-eEeeeC
Confidence 34 48999999999999999999999999996 54 459999
Q ss_pred CCCHHHHHHHhhHhhchhHHHHHh
Q 006357 392 PSDLPAAMRQQKRWAMGLLEILLS 415 (648)
Q Consensus 392 P~tl~~~~~Qr~RWa~G~~qi~~~ 415 (648)
|+|+.++++||.||++|.+|++..
T Consensus 267 p~t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 267 PETLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred cccHHHHHHHHHHHHcccceeeeh
Confidence 999999999999999999999864
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.97 E-value=8.1e-29 Score=272.25 Aligned_cols=216 Identities=21% Similarity=0.239 Sum_probs=166.4
Q ss_pred CCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCCCCCCCCC
Q 006357 9 ELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGESAKPPST 88 (648)
Q Consensus 9 ~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~~~~~~~~ 88 (648)
|||+ ..+.+|+.|+++++|| +++++|+|||++|.|.+.+.+..
T Consensus 63 yne~-~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~~~~---------------------------------- 105 (420)
T PRK11204 63 YNEG-ENVEETISHLLALRYP--NYEVIAINDGSSDNTGEILDRLA---------------------------------- 105 (420)
T ss_pred CCCH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHHHHH----------------------------------
Confidence 8886 6689999999999999 89999999999997633332210
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEEEEccCCC
Q 006357 89 SSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISREKRP 168 (648)
Q Consensus 89 ~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Yv~Rekr~ 168 (648)
. +.|++.+++++++.
T Consensus 106 --------------------~---------------------------------------------~~~~v~~i~~~~n~ 120 (420)
T PRK11204 106 --------------------A---------------------------------------------QIPRLRVIHLAENQ 120 (420)
T ss_pred --------------------H---------------------------------------------hCCcEEEEEcCCCC
Confidence 0 12556777765533
Q ss_pred CCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccCh---hhh----h
Q 006357 169 KHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDS---PAD----S 241 (648)
Q Consensus 169 g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~---~~~----~ 241 (648)
+||+|+|.|++ .+++|+++++|||.+ ++||+|.+++..|.+ +++++.||+.....+. .+. +
T Consensus 121 -----Gka~aln~g~~----~a~~d~i~~lDaD~~-~~~d~L~~l~~~~~~--~~~v~~v~g~~~~~~~~~~~~~~~~~~ 188 (420)
T PRK11204 121 -----GKANALNTGAA----AARSEYLVCIDGDAL-LDPDAAAYMVEHFLH--NPRVGAVTGNPRIRNRSTLLGRIQVGE 188 (420)
T ss_pred -----CHHHHHHHHHH----HcCCCEEEEECCCCC-CChhHHHHHHHHHHh--CCCeEEEECCceeccchhHHHHHHHHH
Confidence 59999999999 689999999999987 699999999999962 4789999997766521 111 1
Q ss_pred HHHHHHhhhhhhhhcCCccc-ccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcCC
Q 006357 242 LAILHESLGKGIVGIQGPFY-AGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGK 320 (648)
Q Consensus 242 ~~~f~~~~~~g~dg~~g~~~-~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~ 320 (648)
....++....+....+...+ .|+++.+||+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l----------------------------------------------- 221 (420)
T PRK11204 189 FSSIIGLIKRAQRVYGRVFTVSGVITAFRKSAL----------------------------------------------- 221 (420)
T ss_pred HHHhhhHHHHHHHHhCCceEecceeeeeeHHHH-----------------------------------------------
Confidence 22233333333333444433 477788888877
Q ss_pred CCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHH
Q 006357 321 NTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMR 400 (648)
Q Consensus 321 ~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~ 400 (648)
.++ |||+.+.++||+++++|++++||++.|++ +.. ++++.|+|++++++
T Consensus 222 ---------------~~v--------------gg~~~~~~~ED~~l~~rl~~~G~~i~~~p-~~~-~~~~~p~t~~~~~~ 270 (420)
T PRK11204 222 ---------------HEV--------------GYWSTDMITEDIDISWKLQLRGWDIRYEP-RAL-CWILMPETLKGLWK 270 (420)
T ss_pred ---------------HHh--------------CCCCCCcccchHHHHHHHHHcCCeEEecc-ccE-EEeECcccHHHHHH
Confidence 244 48999999999999999999999999995 554 58999999999999
Q ss_pred HhhHhhchhHHHHHhh
Q 006357 401 QQKRWAMGLLEILLSE 416 (648)
Q Consensus 401 Qr~RWa~G~~qi~~~~ 416 (648)
||.||++|.+|.++++
T Consensus 271 Qr~RW~~G~~~~l~~~ 286 (420)
T PRK11204 271 QRLRWAQGGAEVLLKN 286 (420)
T ss_pred HHHHHhcCHHHHHHHH
Confidence 9999999999999844
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.96 E-value=7.5e-28 Score=266.81 Aligned_cols=268 Identities=14% Similarity=0.121 Sum_probs=184.4
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCC
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGE 81 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~ 81 (648)
.|.| |||+ ..+.+++.|++.++||.++++|+|+|||++|.|.+.+.++.+
T Consensus 54 IIP~---yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~-------------------------- 103 (439)
T TIGR03111 54 IIPV---YNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN-------------------------- 103 (439)
T ss_pred EEEe---CCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH--------------------------
Confidence 4555 8888 788999999999999999999999999999987554444211
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEE
Q 006357 82 SAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIY 161 (648)
Q Consensus 82 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Y 161 (648)
..|++..
T Consensus 104 -------------------------------------------------------------------------~~~~v~v 110 (439)
T TIGR03111 104 -------------------------------------------------------------------------EFPGLSL 110 (439)
T ss_pred -------------------------------------------------------------------------hCCCeEE
Confidence 0122222
Q ss_pred EEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc-Chhhh
Q 006357 162 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY-DSPAD 240 (648)
Q Consensus 162 v~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~-D~~~~ 240 (648)
+..++ .++||+|+|.|++ .+++|||+++|||++ ++||+|++++..|.+ +++++.|+..+.-. +....
T Consensus 111 ~~~~~-----~~Gka~AlN~gl~----~s~g~~v~~~DaD~~-~~~d~L~~l~~~f~~--~~~v~~v~g~~~~~~~~~~~ 178 (439)
T TIGR03111 111 RYMNS-----DQGKAKALNAAIY----NSIGKYIIHIDSDGK-LHKDAIKNMVTRFEN--NPDIHAMTGVILTDKELIEK 178 (439)
T ss_pred EEeCC-----CCCHHHHHHHHHH----HccCCEEEEECCCCC-cChHHHHHHHHHHHh--CCCeEEEEeEEecCchhhhh
Confidence 22222 1479999999999 688999999999998 699999999999973 36787776544221 11110
Q ss_pred ---------hHHHHHHhhh-----hhh-hhcCCcc-cccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcC
Q 006357 241 ---------SLAILHESLG-----KGI-VGIQGPF-YAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSG 304 (648)
Q Consensus 241 ---------~~~~f~~~~~-----~g~-dg~~g~~-~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG 304 (648)
+...+++... ++. ...+.++ ..|+++++||+++
T Consensus 179 ~~~~~~~~~~~~~~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l------------------------------- 227 (439)
T TIGR03111 179 TKGRFLKLIRRCEYFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETI------------------------------- 227 (439)
T ss_pred hcchhhhHhHHhHHHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHH-------------------------------
Confidence 0000111110 111 1112222 2355566777666
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHh-CCcEEEEeCCC
Q 006357 305 NSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHA-KGWKTSYCSPD 383 (648)
Q Consensus 305 ~s~~~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~-~Gwrs~y~~~~ 383 (648)
.++ |||+.++++||++++++++. .|+++.|++ +
T Consensus 228 -------------------------------~~v--------------ggf~~~~i~ED~~l~~rl~~~~g~kv~~~~-~ 261 (439)
T TIGR03111 228 -------------------------------LKT--------------QLYNSETVGEDTDMTFQIRELLDGKVYLCE-N 261 (439)
T ss_pred -------------------------------HHh--------------CCCCCCCcCccHHHHHHHHHhcCCeEEECC-C
Confidence 345 48999999999999999975 699999985 5
Q ss_pred CCcccccCCCCHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Q 006357 384 PHAFLGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITN 463 (648)
Q Consensus 384 ~~a~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g 463 (648)
. .++.++|+|++++++||.||++|.+|++....++... ++.++.++..+...+......++..++.++++++..++
T Consensus 262 a-~~~~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (439)
T TIGR03111 262 A-IFYVDPIDGLNKLYTQRQRWQRGELEVSHMFFESANK---SIKGFFSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLG 337 (439)
T ss_pred C-EEEEECCcCHHHHHHHHHHHhccHHHHHHHHHhhhhh---chhhhhhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhc
Confidence 4 4589999999999999999999999999744333332 44666666555444344444567777778888877776
Q ss_pred CC
Q 006357 464 TS 465 (648)
Q Consensus 464 ~~ 465 (648)
.+
T Consensus 338 ~~ 339 (439)
T TIGR03111 338 YP 339 (439)
T ss_pred cH
Confidence 54
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.96 E-value=8.8e-27 Score=260.26 Aligned_cols=189 Identities=23% Similarity=0.192 Sum_probs=133.5
Q ss_pred CCchHHHHHHHHhcC--CC---CCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccCh---------h
Q 006357 173 HYKAGAMNVLTRVSG--LM---TNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDS---------P 238 (648)
Q Consensus 173 ~~KAGaLN~~L~~s~--~~---t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~---------~ 238 (648)
+.||+|||.+++..- .. .++|+|+++|||+. ++|++|+....++ ++.++||.|+...+. |
T Consensus 135 ~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~-v~Pd~Lr~~~~~~-----~~~~~VQ~pv~~~~~~~~~~~ag~y 208 (504)
T PRK14716 135 TSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDV-IHPLELRLYNYLL-----PRHDFVQLPVFSLPRDWGEWVAGTY 208 (504)
T ss_pred CCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCC-cCccHHHHHHhhc-----CCCCEEecceeccCCchhHHHHHHH
Confidence 489999999997420 01 23499999999987 6999999765554 346789999765511 1
Q ss_pred hhhHHHHHHhhhhhhhhcCCcc-cccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhh
Q 006357 239 ADSLAILHESLGKGIVGIQGPF-YAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDAL 317 (648)
Q Consensus 239 ~~~~~~f~~~~~~g~dg~~g~~-~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~ 317 (648)
..+....+...+..++.+++++ ++|+|+.+||++|..+
T Consensus 209 ~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l----------------------------------------- 247 (504)
T PRK14716 209 MDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERL----------------------------------------- 247 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHH-----------------------------------------
Confidence 1112222334456778888876 5799999999998210
Q ss_pred cCCCCCCCCCchhHHHHhhhhccccccccccccccc-ccccccccchHHHHHHHHhCCcEEEEeCCCC------------
Q 006357 318 EGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKV-GWLYGSATEDILTGLMIHAKGWKTSYCSPDP------------ 384 (648)
Q Consensus 318 ~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~-G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~------------ 384 (648)
+.+-| | +|+.+|+|||+++|++++.+|||++|++ ++
T Consensus 248 -----------------~~~~G-------------G~~fd~~sLTED~dLglRL~~~G~rv~y~p-~ai~~~~~~~~~~~ 296 (504)
T PRK14716 248 -----------------AAERG-------------GQPFDSDSLTEDYDIGLRLKRAGFRQIFVR-VRADDTTDRPDRRG 296 (504)
T ss_pred -----------------HhhcC-------------CCCCCCCCcchHHHHHHHHHHCCCEEEEec-cccccccccccccc
Confidence 00011 2 3999999999999999999999999995 43
Q ss_pred --CcccccCCCCHHHHHHHhhHhhchh-HHHHHhh-cchhhhhccCCCCHHHHHhHHHHHH
Q 006357 385 --HAFLGCGPSDLPAAMRQQKRWAMGL-LEILLSE-HSPILATLTGKLQFRQCLGYLWLLI 441 (648)
Q Consensus 385 --~a~~g~aP~tl~~~~~Qr~RWa~G~-~qi~~~~-~~pl~~~~~~~l~~~qrl~y~~~~~ 441 (648)
.++++++|+|++++++||.||++|. +|...+. ++.-+. .+.+.+++|...+..++
T Consensus 297 ~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~--~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 297 EPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA--TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred ccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--hhhhHHHHHHHHHHHHH
Confidence 2356889999999999999999995 7886421 111111 14577888887776643
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.94 E-value=7.9e-26 Score=227.96 Aligned_cols=214 Identities=23% Similarity=0.292 Sum_probs=162.5
Q ss_pred CCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCCCCCCCCC
Q 006357 9 ELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGESAKPPST 88 (648)
Q Consensus 9 ~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~~~~~~~~ 88 (648)
|||. ..+.+++.|+++++||.++++++|+|| ++|.|++.+.+..+
T Consensus 10 yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~--------------------------------- 54 (232)
T cd06437 10 FNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE--------------------------------- 54 (232)
T ss_pred CCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---------------------------------
Confidence 7885 578999999999999999999999998 88887666555211
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEEEEccCCC
Q 006357 89 SSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISREKRP 168 (648)
Q Consensus 89 ~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Yv~Rekr~ 168 (648)
++. . ..+.+.++.+.++.
T Consensus 55 --------------~~~---~---------------------------------------------~~~~i~~~~~~~~~ 72 (232)
T cd06437 55 --------------EYA---A---------------------------------------------QGVNIKHVRRADRT 72 (232)
T ss_pred --------------HHh---h---------------------------------------------cCCceEEEECCCCC
Confidence 110 0 01556777777654
Q ss_pred CCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccCh---hhh-----
Q 006357 169 KHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDS---PAD----- 240 (648)
Q Consensus 169 g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~---~~~----- 240 (648)
| +|++|+|.|++ .++++||+++|||++ ++|++|.++..++.| +++|+||.+..+.+. +-.
T Consensus 73 G----~k~~a~n~g~~----~a~~~~i~~~DaD~~-~~~~~l~~~~~~~~~---~~v~~v~~~~~~~~~~~~~~~~~~~~ 140 (232)
T cd06437 73 G----YKAGALAEGMK----VAKGEYVAIFDADFV-PPPDFLQKTPPYFAD---PKLGFVQTRWGHINANYSLLTRVQAM 140 (232)
T ss_pred C----CchHHHHHHHH----hCCCCEEEEEcCCCC-CChHHHHHhhhhhcC---CCeEEEecceeeEcCCCchhhHhhhh
Confidence 4 79999999999 689999999999998 699999998877754 689999997765421 111
Q ss_pred hHHHHHHhhhhhhhhcCCcc-cccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcC
Q 006357 241 SLAILHESLGKGIVGIQGPF-YAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEG 319 (648)
Q Consensus 241 ~~~~f~~~~~~g~dg~~g~~-~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g 319 (648)
....++...+.+....+..+ .+|+++++||+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~---------------------------------------------- 174 (232)
T cd06437 141 SLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECI---------------------------------------------- 174 (232)
T ss_pred hHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHH----------------------------------------------
Confidence 11123444444444444333 4688888888877
Q ss_pred CCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHH
Q 006357 320 KNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAM 399 (648)
Q Consensus 320 ~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~ 399 (648)
.++ |||...+..||+++++|++.+||++.|++ +.. ++.+.|+|+.+++
T Consensus 175 ----------------~~v--------------gg~~~~~~~ED~~l~~rl~~~G~~~~~~~-~~~-v~~~~~~~~~~~~ 222 (232)
T cd06437 175 ----------------EDA--------------GGWNHDTLTEDLDLSYRAQLKGWKFVYLD-DVV-VPAELPASMSAYR 222 (232)
T ss_pred ----------------HHh--------------CCCCCCcchhhHHHHHHHHHCCCeEEEec-cce-eeeeCCcCHHHHH
Confidence 245 48888888999999999999999999995 554 5899999999999
Q ss_pred HHhhHhhchh
Q 006357 400 RQQKRWAMGL 409 (648)
Q Consensus 400 ~Qr~RWa~G~ 409 (648)
+||+||++|.
T Consensus 223 ~q~~rW~~g~ 232 (232)
T cd06437 223 SQQHRWSKGP 232 (232)
T ss_pred HHHHHhccCC
Confidence 9999999983
No 21
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.94 E-value=1.3e-25 Score=224.81 Aligned_cols=220 Identities=32% Similarity=0.536 Sum_probs=174.7
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCC
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGE 81 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~ 81 (648)
.|+| |+|++..+..++.|+++.+||.++++++|+|||+++.|.+.+.+.
T Consensus 6 iip~---~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~---------------------------- 54 (234)
T cd06421 6 FIPT---YNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAEL---------------------------- 54 (234)
T ss_pred EEec---CCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHh----------------------------
Confidence 4555 899989999999999999999888999999999988653222210
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEE
Q 006357 82 SAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIY 161 (648)
Q Consensus 82 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Y 161 (648)
.. . ..+.+
T Consensus 55 --------------------------~~---------------------------------------------~-~~~~~ 62 (234)
T cd06421 55 --------------------------GV---------------------------------------------E-YGYRY 62 (234)
T ss_pred --------------------------hc---------------------------------------------c-cCceE
Confidence 00 0 12345
Q ss_pred EEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc--Chh-
Q 006357 162 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY--DSP- 238 (648)
Q Consensus 162 v~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~--D~~- 238 (648)
+.+++ +.++|+||+|.|++ .+++|||+++|+|.+ ++|++|.+++..|.+ +++++.|++++.++ +..
T Consensus 63 ~~~~~----~~~~~~~~~n~~~~----~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~--~~~~~~v~~~~~~~~~~~~~ 131 (234)
T cd06421 63 LTRPD----NRHAKAGNLNNALA----HTTGDFVAILDADHV-PTPDFLRRTLGYFLD--DPKVALVQTPQFFYNPDPFD 131 (234)
T ss_pred EEeCC----CCCCcHHHHHHHHH----hCCCCEEEEEccccC-cCccHHHHHHHHHhc--CCCeEEEecceEEecCCcch
Confidence 55555 33589999999999 679999999999998 589999999999974 37899999998887 221
Q ss_pred ------hhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHH
Q 006357 239 ------ADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKS 312 (648)
Q Consensus 239 ------~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s 312 (648)
......|+..+..+....+...+.|.+.++||+++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~-------------------------------------- 173 (234)
T cd06421 132 WLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALD-------------------------------------- 173 (234)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHH--------------------------------------
Confidence 223445666666676666677888999999998872
Q ss_pred HHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCC
Q 006357 313 AVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGP 392 (648)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP 392 (648)
++ +||+...+.||++++.+++.+||++.|++ ++. ++++.|
T Consensus 174 ------------------------~i--------------g~~~~~~~~eD~~l~~r~~~~g~~i~~~~-~~~-~~~~~~ 213 (234)
T cd06421 174 ------------------------EI--------------GGFPTDSVTEDLATSLRLHAKGWRSVYVP-EPL-AAGLAP 213 (234)
T ss_pred ------------------------Hh--------------CCCCccceeccHHHHHHHHHcCceEEEec-Ccc-ccccCC
Confidence 34 47877788999999999999999999996 554 489999
Q ss_pred CCHHHHHHHhhHhhchhHHHH
Q 006357 393 SDLPAAMRQQKRWAMGLLEIL 413 (648)
Q Consensus 393 ~tl~~~~~Qr~RWa~G~~qi~ 413 (648)
+++..+++||.||.+|++|++
T Consensus 214 ~~~~~~~~q~~rw~~~~~~~~ 234 (234)
T cd06421 214 ETLAAYIKQRLRWARGMLQIL 234 (234)
T ss_pred ccHHHHHHHHHHHhcCCeeeC
Confidence 999999999999999999853
No 22
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.94 E-value=3.2e-25 Score=223.40 Aligned_cols=224 Identities=25% Similarity=0.328 Sum_probs=166.6
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|.|+| ++|++..+.+++.|++.++|| .++++|+|||+++.|+....+
T Consensus 2 iiip~---~ne~~~~l~~~l~sl~~q~~~--~~eiiVvdd~s~D~t~~~~i~---------------------------- 48 (236)
T cd06435 2 IHVPC---YEEPPEMVKETLDSLAALDYP--NFEVIVIDNNTKDEALWKPVE---------------------------- 48 (236)
T ss_pred eeEee---CCCcHHHHHHHHHHHHhCCCC--CcEEEEEeCCCCchhHHHHHH----------------------------
Confidence 46777 999999999999999999999 689999999999876321111
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
++..+ . -+++.
T Consensus 49 -------------------------~~~~~--~------------------------------------------~~~i~ 59 (236)
T cd06435 49 -------------------------AHCAQ--L------------------------------------------GERFR 59 (236)
T ss_pred -------------------------HHHHH--h------------------------------------------CCcEE
Confidence 00000 0 02345
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccCh---
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDS--- 237 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~--- 237 (648)
++..++++ ++|+||+|.|++... .++|+|+++|+|.. ++|++|.+++.+|.+ ++++.||+|+.+.+.
T Consensus 60 ~i~~~~~~----G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~-~~~~~l~~l~~~~~~---~~~~~v~~~~~~~~~~~~ 129 (236)
T cd06435 60 FFHVEPLP----GAKAGALNYALERTA--PDAEIIAVIDADYQ-VEPDWLKRLVPIFDD---PRVGFVQAPQDYRDGEES 129 (236)
T ss_pred EEEcCCCC----CCchHHHHHHHHhcC--CCCCEEEEEcCCCC-cCHHHHHHHHHHhcC---CCeeEEecCccccCCCcc
Confidence 66665533 479999999999532 45899999999987 689999999999853 789999998766532
Q ss_pred -hhh----hHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHH
Q 006357 238 -PAD----SLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKS 312 (648)
Q Consensus 238 -~~~----~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s 312 (648)
+.- ....++..........+..+..|+++++||+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~--------------------------------------- 170 (236)
T cd06435 130 LFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSAL--------------------------------------- 170 (236)
T ss_pred HHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHH---------------------------------------
Confidence 211 011122222222333344456788888999887
Q ss_pred HHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCC
Q 006357 313 AVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGP 392 (648)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP 392 (648)
.++ |||+....+||+++++|++.+||++.|++ +..+ +...|
T Consensus 171 -----------------------~~i--------------Ggf~~~~~~eD~dl~~r~~~~G~~~~~~~-~~~~-~~~~~ 211 (236)
T cd06435 171 -----------------------DDV--------------GGWDEWCITEDSELGLRMHEAGYIGVYVA-QSYG-HGLIP 211 (236)
T ss_pred -----------------------HHh--------------CCCCCccccchHHHHHHHHHCCcEEEEcc-hhhc-cCcCc
Confidence 244 47888888999999999999999999995 5544 89999
Q ss_pred CCHHHHHHHhhHhhchhHHHHH
Q 006357 393 SDLPAAMRQQKRWAMGLLEILL 414 (648)
Q Consensus 393 ~tl~~~~~Qr~RWa~G~~qi~~ 414 (648)
+|+.++++||.||++|.+|++.
T Consensus 212 ~~~~~~~~q~~rw~~g~~~~~~ 233 (236)
T cd06435 212 DTFEAFKKQRFRWAYGAVQILK 233 (236)
T ss_pred ccHHHHHHHHHHHhcchhhhhh
Confidence 9999999999999999999986
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.93 E-value=3.6e-25 Score=225.04 Aligned_cols=222 Identities=22% Similarity=0.292 Sum_probs=168.4
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCC
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGE 81 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~ 81 (648)
.|+| +||+ ..+.+|+.|+++++||.++++++|+|||+++.|.+.+.+.. . |
T Consensus 6 iIp~---~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~---~---------------~------- 56 (241)
T cd06427 6 LVPL---YKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALR---L---------------P------- 56 (241)
T ss_pred EEec---CCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhc---c---------------C-------
Confidence 4555 8887 77899999999999998899999999999997744333210 0 0
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEE
Q 006357 82 SAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIY 161 (648)
Q Consensus 82 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Y 161 (648)
...++++
T Consensus 57 -------------------------------------------------------------------------~~~~i~~ 63 (241)
T cd06427 57 -------------------------------------------------------------------------SIFRVVV 63 (241)
T ss_pred -------------------------------------------------------------------------CCeeEEE
Confidence 0022333
Q ss_pred EEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccCh---h
Q 006357 162 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDS---P 238 (648)
Q Consensus 162 v~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~---~ 238 (648)
+...++ .+|++|+|.|++ .++||||+.+|+|+. ++|++|.+++.+|.+ .++++++||.+..+++. +
T Consensus 64 ~~~~~~-----~G~~~a~n~g~~----~a~gd~i~~~DaD~~-~~~~~l~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~ 132 (241)
T cd06427 64 VPPSQP-----RTKPKACNYALA----FARGEYVVIYDAEDA-PDPDQLKKAVAAFAR-LDDKLACVQAPLNYYNARENW 132 (241)
T ss_pred ecCCCC-----CchHHHHHHHHH----hcCCCEEEEEcCCCC-CChHHHHHHHHHHHh-cCCCEEEEeCceEeeCCCccH
Confidence 333221 369999999999 689999999999998 589999999999973 23789999988766621 1
Q ss_pred -----hhhHHHHHHhhhhhhhhcCCccc-ccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHH
Q 006357 239 -----ADSLAILHESLGKGIVGIQGPFY-AGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKS 312 (648)
Q Consensus 239 -----~~~~~~f~~~~~~g~dg~~g~~~-~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s 312 (648)
......+++...++....+.++. .|+++++||+++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~--------------------------------------- 173 (241)
T cd06427 133 LTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVL--------------------------------------- 173 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHH---------------------------------------
Confidence 11122344555566666665543 577778888877
Q ss_pred HHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCC
Q 006357 313 AVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGP 392 (648)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP 392 (648)
.++ |||.....+||+++++|++.+|||+.+++ .. ++++.|
T Consensus 174 -----------------------~~v--------------gg~~~~~~~eD~~l~~rl~~~G~r~~~~~-~~--~~~~~~ 213 (241)
T cd06427 174 -----------------------REL--------------GGWDPFNVTEDADLGLRLARAGYRTGVLN-ST--TLEEAN 213 (241)
T ss_pred -----------------------HHc--------------CCCCcccchhhHHHHHHHHHCCceEEEec-cc--ccccCc
Confidence 245 47887788999999999999999999995 42 478999
Q ss_pred CCHHHHHHHhhHhhchhHHHHHh
Q 006357 393 SDLPAAMRQQKRWAMGLLEILLS 415 (648)
Q Consensus 393 ~tl~~~~~Qr~RWa~G~~qi~~~ 415 (648)
+|++++++||.||++|.+|++..
T Consensus 214 ~~~~~~~~q~~Rw~~g~~~~~~~ 236 (241)
T cd06427 214 NALGNWIRQRSRWIKGYMQTWLV 236 (241)
T ss_pred HhHHHHHHHHHHHhccHHHHHHH
Confidence 99999999999999999999864
No 24
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=2.8e-24 Score=249.03 Aligned_cols=166 Identities=21% Similarity=0.251 Sum_probs=123.9
Q ss_pred CCchHHHHHHHHhcCC-----CCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccCh---------h
Q 006357 173 HYKAGAMNVLTRVSGL-----MTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDS---------P 238 (648)
Q Consensus 173 ~~KAGaLN~~L~~s~~-----~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~---------~ 238 (648)
++||+|||+++...-. -...+.++++|||.. ++|++|+ .+.++.+ ++ ++||.|..-..+ |
T Consensus 132 ~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~-v~pd~L~-~~~~l~~---~~-~~VQ~p~~p~~~~~~~~~~~~~ 205 (727)
T PRK11234 132 TSKADCLNNVLDAITQFERSANFAFAGFILHDAEDV-ISPMELR-LFNYLVE---RK-DLIQIPVYPFEREWTHFTSGTY 205 (727)
T ss_pred CCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCC-CChhHHH-HHHhhcC---CC-CeEeecccCCCccHHHHHHHHH
Confidence 4799999999985310 023467888999987 7999998 6788874 34 899999654322 1
Q ss_pred hhhHHHHHHhhhhhhhhcCCccc-ccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhh
Q 006357 239 ADSLAILHESLGKGIVGIQGPFY-AGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDAL 317 (648)
Q Consensus 239 ~~~~~~f~~~~~~g~dg~~g~~~-~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~ 317 (648)
..+....+...+++++.++|++. .|+|+.++|+++.
T Consensus 206 ~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~------------------------------------------- 242 (727)
T PRK11234 206 IDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVT------------------------------------------- 242 (727)
T ss_pred HHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHH-------------------------------------------
Confidence 13344455567889999987765 6999999555430
Q ss_pred cCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeC----------------
Q 006357 318 EGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCS---------------- 381 (648)
Q Consensus 318 ~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~---------------- 381 (648)
+..++|| ..||..+++|||+++|++|+.+||+++|++
T Consensus 243 ----------------al~~~gg-----------g~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~ 295 (727)
T PRK11234 243 ----------------ALLEDGD-----------GIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFL 295 (727)
T ss_pred ----------------HHHHhcC-----------CCCcCCCcchHHHHHHHHHHHCCCEEEEcccccccccccccccccc
Confidence 1123431 126999999999999999999999999996
Q ss_pred -----CCCCcccccCCCCHHHHHHHhhHhhch-hHHHHH
Q 006357 382 -----PDPHAFLGCGPSDLPAAMRQQKRWAMG-LLEILL 414 (648)
Q Consensus 382 -----~~~~a~~g~aP~tl~~~~~Qr~RWa~G-~~qi~~ 414 (648)
.++.+++++.|+|++++++||.||.+| .+|.+.
T Consensus 296 ~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 296 QHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred cccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 112457889999999999999999999 688874
No 25
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.89 E-value=4.2e-23 Score=211.20 Aligned_cols=168 Identities=14% Similarity=0.036 Sum_probs=111.2
Q ss_pred HHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccChhhhhHHHH--------HHhh
Q 006357 178 AMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADSLAIL--------HESL 249 (648)
Q Consensus 178 aLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~~~~~~~~f--------~~~~ 249 (648)
++|.++. .+++|||+++|||++ ++|++|++++.+|.. +|++|.||+.+...++..+....+ ....
T Consensus 64 ~~~~~~~----~a~~e~i~~~DaD~~-~~~~~l~~l~~~~~~--~p~vg~v~g~~~~~~~~~~~~~~~q~~ey~~~~~~~ 136 (244)
T cd04190 64 YFCRVLF----PDDPEFILLVDADTK-FDPDSIVQLYKAMDK--DPEIGGVCGEIHPMGKKQGPLVMYQVFEYAISHWLD 136 (244)
T ss_pred HHHHHhh----cCCCCEEEEECCCCc-CCHhHHHHHHHHHHh--CCCEEEEEeeeEEcCCcchhHHHhHheehhhhhhhc
Confidence 4566665 689999999999998 599999999999952 378999999876653222211111 1111
Q ss_pred hhhhhhcCCcc-cccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCCc
Q 006357 250 GKGIVGIQGPF-YAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNL 328 (648)
Q Consensus 250 ~~g~dg~~g~~-~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~~ 328 (648)
..+.+..+... ..|++..+|++++.+......
T Consensus 137 ~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~----------------------------------------------- 169 (244)
T cd04190 137 KAFESVFGFVTCLPGCFSMYRIEALKGDNGGKG----------------------------------------------- 169 (244)
T ss_pred ccHHHcCCceEECCCceEEEEehhhcCCccccc-----------------------------------------------
Confidence 12233344433 458889999999853211000
Q ss_pred hhHHHHhhhhcccccccccccccc-cccccccccchHHHHHHHHhCCcEEEE--eCCCCCcccccCCCCHHHHHHHhhHh
Q 006357 329 SDSLKAANQVAGCGYEYGSSWGKK-VGWLYGSATEDILTGLMIHAKGWKTSY--CSPDPHAFLGCGPSDLPAAMRQQKRW 405 (648)
Q Consensus 329 ~~~~~~a~~v~~c~ye~~t~wgk~-~G~~~~svtED~~t~~~l~~~Gwrs~y--~~~~~~a~~g~aP~tl~~~~~Qr~RW 405 (648)
..+.++|-.++ ..+ .+....+++||++++++|..+||++.| ++ +.. +++++|+|++++++||.||
T Consensus 170 --------~~~~~~~~~~~--~~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~-~a~-~~~~~p~s~~~~~~QR~RW 237 (244)
T cd04190 170 --------PLLDYAYLTNT--VDSLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVP-GAV-AETDVPETFVELLSQRRRW 237 (244)
T ss_pred --------cchhhccccCc--ccchHHHHHHhHhcccceeHHHhccCCccEEEEec-ccE-EEEECCCCHHHHHHHhHhh
Confidence 00000000000 000 233456789999999999999999999 74 544 4899999999999999999
Q ss_pred hchhHH
Q 006357 406 AMGLLE 411 (648)
Q Consensus 406 a~G~~q 411 (648)
++|++.
T Consensus 238 ~~g~~~ 243 (244)
T cd04190 238 INSTIA 243 (244)
T ss_pred hccccc
Confidence 999863
No 26
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.89 E-value=6.9e-24 Score=212.26 Aligned_cols=162 Identities=23% Similarity=0.323 Sum_probs=101.4
Q ss_pred EEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccC--
Q 006357 159 LIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYD-- 236 (648)
Q Consensus 159 l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D-- 236 (648)
+.++.+++++| ...|++|+|.+++ ..++|+|+++|+|.+ ++|++|++++.+|.+ +++++||++..+++
T Consensus 60 v~vi~~~~~~g--~~~k~~a~n~~~~----~~~~d~i~~lD~D~~-~~p~~l~~~~~~~~~---~~~~~v~~~~~~~~~~ 129 (228)
T PF13641_consen 60 VRVIRRPRNPG--PGGKARALNEALA----AARGDYILFLDDDTV-LDPDWLERLLAAFAD---PGVGAVGGPVFPDNDR 129 (228)
T ss_dssp EEEEE----HH--HHHHHHHHHHHHH----H---SEEEEE-SSEE-E-CHHHHHHHHHHHB---SS--EEEEEEEETTCC
T ss_pred eEEeecCCCCC--cchHHHHHHHHHH----hcCCCEEEEECCCcE-ECHHHHHHHHHHHHh---CCCCeEeeeEeecCCC
Confidence 56666655332 1269999999999 578999999999987 599999999999954 78999998775541
Q ss_pred -hhhhhHHHHH----HhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHH
Q 006357 237 -SPADSLAILH----ESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIK 311 (648)
Q Consensus 237 -~~~~~~~~f~----~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~ 311 (648)
.+......++ .....+....+..++.|+++++||+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~------------------------------------- 172 (228)
T PF13641_consen 130 NWLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALE------------------------------------- 172 (228)
T ss_dssp CEEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHH-------------------------------------
T ss_pred CHHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHH-------------------------------------
Confidence 1111111111 1122333445556668999999998872
Q ss_pred HHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccC
Q 006357 312 SAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCG 391 (648)
Q Consensus 312 s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~a 391 (648)
++ +||+.....||.++++++..+||++.|++ +. .++.+.
T Consensus 173 -------------------------~~--------------g~fd~~~~~eD~~l~~r~~~~G~~~~~~~-~~-~v~~~~ 211 (228)
T PF13641_consen 173 -------------------------EV--------------GGFDPFILGEDFDLCLRLRAAGWRIVYAP-DA-LVYHEE 211 (228)
T ss_dssp -------------------------HH---------------S--SSSSSHHHHHHHHHHHTT--EEEEE-EE-EEEE--
T ss_pred -------------------------Hh--------------CCCCCCCcccHHHHHHHHHHCCCcEEEEC-Cc-EEEEeC
Confidence 44 48888888999999999999999999995 54 458999
Q ss_pred CCCHHHHHHHhhHhhch
Q 006357 392 PSDLPAAMRQQKRWAMG 408 (648)
Q Consensus 392 P~tl~~~~~Qr~RWa~G 408 (648)
|.|++++++||.||++|
T Consensus 212 ~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 212 PSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp SSSTHHHHHHHHHHH--
T ss_pred CCCHHHHHHHHhccCcC
Confidence 99999999999999988
No 27
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.88 E-value=1.2e-21 Score=194.98 Aligned_cols=219 Identities=18% Similarity=0.203 Sum_probs=157.0
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|.|+| ++|+ ..+.+|+.|++.++||.++++++|+|||+++.|.+.+.. . .
T Consensus 1 viip~---~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~--~--~---------------------- 50 (229)
T cd04192 1 VVIAA---RNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEF--A--A---------------------- 50 (229)
T ss_pred CEEEe---cCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHH--H--H----------------------
Confidence 46777 7776 779999999999999988899999999999876333220 0 0
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
. ...+++.
T Consensus 51 --------------------------------~----------------------------------------~~~~~v~ 58 (229)
T cd04192 51 --------------------------------A----------------------------------------KPNFQLK 58 (229)
T ss_pred --------------------------------h----------------------------------------CCCcceE
Confidence 0 0014455
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc--Chh
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY--DSP 238 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~--D~~ 238 (648)
++.++. + ...+|+.|+|.+++ .+++++|+++|+|+. +.|++|.+++.+|.+ +..+.|+.++.+. +.+
T Consensus 59 ~~~~~~--~-~~~g~~~a~n~g~~----~~~~d~i~~~D~D~~-~~~~~l~~l~~~~~~---~~~~~v~~~~~~~~~~~~ 127 (229)
T cd04192 59 ILNNSR--V-SISGKKNALTTAIK----AAKGDWIVTTDADCV-VPSNWLLTFVAFIQK---EQIGLVAGPVIYFKGKSL 127 (229)
T ss_pred EeeccC--c-ccchhHHHHHHHHH----HhcCCEEEEECCCcc-cCHHHHHHHHHHhhc---CCCcEEeeeeeecCCccH
Confidence 555543 1 22579999999999 688999999999997 689999999998864 4577788877665 211
Q ss_pred hhhHH----HHHHhhhhhhhhcCCc-ccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHH
Q 006357 239 ADSLA----ILHESLGKGIVGIQGP-FYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSA 313 (648)
Q Consensus 239 ~~~~~----~f~~~~~~g~dg~~g~-~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~ 313 (648)
..... .+......+..+.+.+ +..|++.++||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~---------------------------------------- 167 (229)
T cd04192 128 LAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAF---------------------------------------- 167 (229)
T ss_pred HHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHH----------------------------------------
Confidence 11111 1111122223334444 34677788898877
Q ss_pred HHhhcCCCCCCCCCchhHHHHhhhhccccccccccccccccccc--ccccchHHHHHHHHhCCc-EEEEeCCCCCccccc
Q 006357 314 VDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLY--GSATEDILTGLMIHAKGW-KTSYCSPDPHAFLGC 390 (648)
Q Consensus 314 ~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~--~svtED~~t~~~l~~~Gw-rs~y~~~~~~a~~g~ 390 (648)
.++ |||+. ...+||.++.+++.++|| ++.|++.....++..
T Consensus 168 ----------------------~~~--------------ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 211 (229)
T cd04192 168 ----------------------FEV--------------GGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQ 211 (229)
T ss_pred ----------------------HHh--------------cCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecC
Confidence 244 47864 567899999999999999 998874322345899
Q ss_pred CCCCHHHHHHHhhHhhch
Q 006357 391 GPSDLPAAMRQQKRWAMG 408 (648)
Q Consensus 391 aP~tl~~~~~Qr~RWa~G 408 (648)
.|.+++++++||+||++|
T Consensus 212 ~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 212 PVTSWKELLNQRKRWASK 229 (229)
T ss_pred CchhHHHHHHHHHHhhcC
Confidence 999999999999999987
No 28
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.86 E-value=7.2e-20 Score=210.34 Aligned_cols=166 Identities=20% Similarity=0.211 Sum_probs=125.2
Q ss_pred CCchHHHHHHHHhc---CCCCCCcE--EEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcc-----cc----Chh
Q 006357 173 HYKAGAMNVLTRVS---GLMTNAPF--MLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQY-----FY----DSP 238 (648)
Q Consensus 173 ~~KAGaLN~~L~~s---~~~t~~~~--i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~-----f~----D~~ 238 (648)
..||.|||.++... .....++| |+++|||.. |+|++|+.+ .++.+. + .+||.|-. .+ -.|
T Consensus 140 ~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~-~~P~~L~~~-~~~~~~--~--~~iQ~pV~~~~~~~~~~l~~~~ 213 (703)
T PRK15489 140 TCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDV-LHPLELKYF-NYLLPR--K--DLVQLPVLSLERKWYEWVAGTY 213 (703)
T ss_pred CCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCC-CChhHHHHH-HhhcCC--c--ceeeeeeccCCCccccHHHHHH
Confidence 37999999999842 00123444 999999987 799999864 677642 3 46997722 11 235
Q ss_pred hhhHHHHHHhhhhhhhhcCCccc-ccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhh
Q 006357 239 ADSLAILHESLGKGIVGIQGPFY-AGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDAL 317 (648)
Q Consensus 239 ~~~~~~f~~~~~~g~dg~~g~~~-~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~ 317 (648)
..+....++..++++..+++++. .|||+.+||++|..
T Consensus 214 ~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~------------------------------------------ 251 (703)
T PRK15489 214 MDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLA------------------------------------------ 251 (703)
T ss_pred HHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHH------------------------------------------
Confidence 56777888889999999999887 58999999999821
Q ss_pred cCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeC----------------
Q 006357 318 EGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCS---------------- 381 (648)
Q Consensus 318 ~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~---------------- 381 (648)
..+.|| | .||..+|+|||+++|+||+++|||+.|+.
T Consensus 252 -----------------l~~~gg--------~---~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~ 303 (703)
T PRK15489 252 -----------------LMKERG--------N---QPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPR 303 (703)
T ss_pred -----------------HHHhcC--------C---CCCCCCCchHhHHHHHHHHHCCCceEEEEEecccccccccccccc
Confidence 011210 0 16888999999999999999999999921
Q ss_pred -----CCCCcccccCCCCHHHHHHHhhHhhchhH-HHHH
Q 006357 382 -----PDPHAFLGCGPSDLPAAMRQQKRWAMGLL-EILL 414 (648)
Q Consensus 382 -----~~~~a~~g~aP~tl~~~~~Qr~RWa~G~~-qi~~ 414 (648)
..+.|++...|.|+++.++||.||..|-. |...
T Consensus 304 ~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~~ 342 (703)
T PRK15489 304 RERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGWE 342 (703)
T ss_pred ccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhHH
Confidence 12467899999999999999999999977 7753
No 29
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.86 E-value=6.5e-20 Score=199.36 Aligned_cols=163 Identities=13% Similarity=0.155 Sum_probs=114.6
Q ss_pred EEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc--C
Q 006357 159 LIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY--D 236 (648)
Q Consensus 159 l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~--D 236 (648)
+.++..+++.| .++|++|+|++++ .+++|+++++|||+. ++|++|++++..|.| ++++.|+++.... +
T Consensus 100 i~~v~~~~~~G--~~~K~~~l~~~~~----~a~ge~i~~~DaD~~-~~p~~L~~lv~~~~~---~~v~~V~~~~~~~~~~ 169 (373)
T TIGR03472 100 IDLVIDARRHG--PNRKVSNLINMLP----HARHDILVIADSDIS-VGPDYLRQVVAPLAD---PDVGLVTCLYRGRPVP 169 (373)
T ss_pred eEEEECCCCCC--CChHHHHHHHHHH----hccCCEEEEECCCCC-cChhHHHHHHHHhcC---CCcceEeccccCCCCC
Confidence 45554434333 3479999999998 689999999999987 699999999999964 6799999865433 1
Q ss_pred hhhhhHH-H-----HHHhhhhhhhhcCC-cccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHH
Q 006357 237 SPADSLA-I-----LHESLGKGIVGIQG-PFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEF 309 (648)
Q Consensus 237 ~~~~~~~-~-----f~~~~~~g~dg~~g-~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~ 309 (648)
.+.+... . |+...... +..+. .++.|++..+||+++
T Consensus 170 ~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a~RR~~l------------------------------------ 212 (373)
T TIGR03472 170 GFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMALRRATL------------------------------------ 212 (373)
T ss_pred CHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhheeHHHH------------------------------------
Confidence 1222111 1 11111111 11222 235677778888877
Q ss_pred HHHHHHhhcCCCCCCCCCchhHHHHhhhhccccccccccccccccccc--ccccchHHHHHHHHhCCcEEEEeCCCCCcc
Q 006357 310 IKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLY--GSATEDILTGLMIHAKGWKTSYCSPDPHAF 387 (648)
Q Consensus 310 ~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~--~svtED~~t~~~l~~~Gwrs~y~~~~~~a~ 387 (648)
+++ |||.. ++++||++++.++..+||++.|.+ ... .
T Consensus 213 --------------------------~~i--------------GGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~-~~v-~ 250 (373)
T TIGR03472 213 --------------------------EAI--------------GGLAALAHHLADDYWLGELVRALGLRVVLAP-VVV-D 250 (373)
T ss_pred --------------------------HHc--------------CChHHhcccchHHHHHHHHHHHcCCeEEecc-hhh-h
Confidence 244 47764 678999999999999999999985 443 4
Q ss_pred cccCCCCHHHHHHHhhHhhchhH
Q 006357 388 LGCGPSDLPAAMRQQKRWAMGLL 410 (648)
Q Consensus 388 ~g~aP~tl~~~~~Qr~RWa~G~~ 410 (648)
....|+|++++++||.||++..-
T Consensus 251 ~~~~~~s~~~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 251 TDVHETSFATLLAHELRWSRTIR 273 (373)
T ss_pred cCCCccCHHHHHHHHHHHHhhhh
Confidence 67888999999999999985443
No 30
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.84 E-value=5.6e-20 Score=181.15 Aligned_cols=121 Identities=18% Similarity=0.239 Sum_probs=102.0
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccChhhhhHHHHHHhhhhhh
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADSLAILHESLGKGI 253 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~~~~~~~~f~~~~~~g~ 253 (648)
+|++|+|.|++ .+++|+++++|+|+. ++|++|.+++..+.+ ++++.|++.
T Consensus 73 ~~~~~~n~g~~----~a~~d~i~~~D~D~~-~~~~~l~~l~~~~~~---~~~~~v~~~---------------------- 122 (196)
T cd02520 73 PKVNNLIKGYE----EARYDILVISDSDIS-VPPDYLRRMVAPLMD---PGVGLVTCL---------------------- 122 (196)
T ss_pred HhHHHHHHHHH----hCCCCEEEEECCCce-EChhHHHHHHHHhhC---CCCCeEEee----------------------
Confidence 69999999999 688999999999987 589999999999864 568888742
Q ss_pred hhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCCchhHHH
Q 006357 254 VGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLK 333 (648)
Q Consensus 254 dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~~~~~~~ 333 (648)
+..|+++++||+++.
T Consensus 123 ------~~~g~~~~~r~~~~~----------------------------------------------------------- 137 (196)
T cd02520 123 ------CAFGKSMALRREVLD----------------------------------------------------------- 137 (196)
T ss_pred ------cccCceeeeEHHHHH-----------------------------------------------------------
Confidence 456889999999872
Q ss_pred Hhhhhccccccccccccccccccc--ccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhhHhhch
Q 006357 334 AANQVAGCGYEYGSSWGKKVGWLY--GSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMG 408 (648)
Q Consensus 334 ~a~~v~~c~ye~~t~wgk~~G~~~--~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 408 (648)
++ +||+. ..++||+++++++..+||++.|++ +. .++.+.|.+++++++||.||++.
T Consensus 138 ---~~--------------ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~-~~-~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 138 ---AI--------------GGFEAFADYLAEDYFLGKLIWRLGYRVVLSP-YV-VMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred ---hc--------------cChHHHhHHHHHHHHHHHHHHHcCCeEEEcc-hh-eeccCCcccHHHHHHHHHHHhcc
Confidence 33 36653 356899999999999999999995 54 45899999999999999999863
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.83 E-value=7.2e-20 Score=183.84 Aligned_cols=163 Identities=18% Similarity=0.145 Sum_probs=112.7
Q ss_pred CCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccCh----hhhhHHHHHHh
Q 006357 173 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDS----PADSLAILHES 248 (648)
Q Consensus 173 ~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~----~~~~~~~f~~~ 248 (648)
.+|++|+|.|++ .+++|+|+++|+|.. ++|++|++++..|.| ++++.|++.+.+++. +......++..
T Consensus 63 ~g~~~a~n~g~~----~a~~d~v~~lD~D~~-~~~~~l~~l~~~~~~---~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~ 134 (235)
T cd06434 63 PGKRRALAEGIR----HVTTDIVVLLDSDTV-WPPNALPEMLKPFED---PKVGGVGTNQRILRPRDSKWSFLAAEYLER 134 (235)
T ss_pred CChHHHHHHHHH----HhCCCEEEEECCCce-eChhHHHHHHHhccC---CCEeEEcCceEeecCcccHHHHHHHHHHHH
Confidence 469999999999 579999999999987 699999999999974 789999998877622 11111112111
Q ss_pred ----hhhhhhhcCCcc-cccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcCCCCC
Q 006357 249 ----LGKGIVGIQGPF-YAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTG 323 (648)
Q Consensus 249 ----~~~g~dg~~g~~-~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~ 323 (648)
........++.. ..|...++||+++...... ..+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~---------------------------~~~~------------- 174 (235)
T cd06434 135 RNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFL---------------------------EEFT------------- 174 (235)
T ss_pred HHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhH---------------------------HHhh-------------
Confidence 111222233322 2466677888887321100 0000
Q ss_pred CCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhh
Q 006357 324 FSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQK 403 (648)
Q Consensus 324 ~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~ 403 (648)
.+.+ +|. .....||.+++.+++.+||++.|++ +..+ +...|.++.++++||.
T Consensus 175 ------------~~~~-------------~~~-~~~~~eD~~l~~~~~~~g~~~~~~~-~~~~-~~~~~~~~~~~~~q~~ 226 (235)
T cd06434 175 ------------NETF-------------MGR-RLNAGDDRFLTRYVLSHGYKTVYQY-TSEA-YTETPENYKKFLKQQL 226 (235)
T ss_pred ------------hhhh-------------cCC-CCCcCchHHHHHHHHHCCCeEEEec-CCeE-EEEcchhHHHHHHHhh
Confidence 0110 122 2467899999999999999999995 5555 7889999999999999
Q ss_pred HhhchhHH
Q 006357 404 RWAMGLLE 411 (648)
Q Consensus 404 RWa~G~~q 411 (648)
||++|..+
T Consensus 227 Rw~~~~~~ 234 (235)
T cd06434 227 RWSRSNWR 234 (235)
T ss_pred hhhhcccC
Confidence 99999753
No 32
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.80 E-value=2.8e-18 Score=174.38 Aligned_cols=149 Identities=16% Similarity=0.168 Sum_probs=104.1
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccChh--hhhHHH---HHHh
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSP--ADSLAI---LHES 248 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~~--~~~~~~---f~~~ 248 (648)
+|++|+|.+++ .+++|+|+++|+|++ ++|++|.+++..+.+ +++++|++.....++- ...... +...
T Consensus 96 g~~~a~n~gi~----~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (251)
T cd06439 96 GKAAALNRALA----LATGEIVVFTDANAL-LDPDALRLLVRHFAD---PSVGAVSGELVIVDGGGSGSGEGLYWKYENW 167 (251)
T ss_pred ChHHHHHHHHH----HcCCCEEEEEccccC-cCHHHHHHHHHHhcC---CCccEEEeEEEecCCcccchhHHHHHHHHHH
Confidence 59999999999 678999999999998 579999999999964 6788888766654221 111111 1111
Q ss_pred hhhhhhhcCCcc-cccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCC
Q 006357 249 LGKGIVGIQGPF-YAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSN 327 (648)
Q Consensus 249 ~~~g~dg~~g~~-~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~ 327 (648)
+.......+... ..|++..+||+++.
T Consensus 168 ~~~~~~~~~~~~~~~g~~~~~rr~~~~----------------------------------------------------- 194 (251)
T cd06439 168 LKRAESRLGSTVGANGAIYAIRRELFR----------------------------------------------------- 194 (251)
T ss_pred HHHHHHhcCCeeeecchHHHhHHHHhc-----------------------------------------------------
Confidence 111111111111 11222224444331
Q ss_pred chhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhhHhhc
Q 006357 328 LSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAM 407 (648)
Q Consensus 328 ~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~ 407 (648)
||......||.+++.++..+||++.|++ ++. .+...|.+..++++|+.||+.
T Consensus 195 --------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~-~~~-~~~~~~~~~~~~~~~~~r~~~ 246 (251)
T cd06439 195 --------------------------PLPADTINDDFVLPLRIARQGYRVVYEP-DAV-AYEEVAEDGSEEFRRRVRIAA 246 (251)
T ss_pred --------------------------CCCcccchhHHHHHHHHHHcCCeEEecc-ccE-EEEeCcccHHHHHHHHHHHHh
Confidence 4555567899999999999999999995 544 489999999999999999999
Q ss_pred hhHH
Q 006357 408 GLLE 411 (648)
Q Consensus 408 G~~q 411 (648)
|++|
T Consensus 247 g~~~ 250 (251)
T cd06439 247 GNLQ 250 (251)
T ss_pred cccc
Confidence 9987
No 33
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.76 E-value=4.3e-17 Score=164.17 Aligned_cols=218 Identities=18% Similarity=0.158 Sum_probs=144.5
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCC
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGE 81 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~ 81 (648)
.|+| ++|+ ..+.+++-|+++.+||..+++++|+|||+++.|.+.+.+
T Consensus 5 iip~---~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~----------------------------- 51 (249)
T cd02525 5 IIPV---RNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQE----------------------------- 51 (249)
T ss_pred EEEc---CCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHH-----------------------------
Confidence 3555 7776 567999999999999978999999999998865222211
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEE
Q 006357 82 SAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIY 161 (648)
Q Consensus 82 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Y 161 (648)
+.. ..|.+.+
T Consensus 52 -------------------------~~~---------------------------------------------~~~~v~~ 61 (249)
T cd02525 52 -------------------------YAA---------------------------------------------KDPRIRL 61 (249)
T ss_pred -------------------------HHh---------------------------------------------cCCeEEE
Confidence 000 0144555
Q ss_pred EEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc--Chhh
Q 006357 162 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY--DSPA 239 (648)
Q Consensus 162 v~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~--D~~~ 239 (648)
+..++ +++++|+|.|++ .+++|+++++|+|.+ ++|++|.+++..+.+ +++..|+.+.... +.+.
T Consensus 62 i~~~~------~~~~~a~N~g~~----~a~~d~v~~lD~D~~-~~~~~l~~~~~~~~~---~~~~~v~~~~~~~~~~~~~ 127 (249)
T cd02525 62 IDNPK------RIQSAGLNIGIR----NSRGDIIIRVDAHAV-YPKDYILELVEALKR---TGADNVGGPMETIGESKFQ 127 (249)
T ss_pred EeCCC------CCchHHHHHHHH----HhCCCEEEEECCCcc-CCHHHHHHHHHHHhc---CCCCEEecceecCCCChHH
Confidence 55432 358899999999 679999999999987 699999999998865 3455555543222 2222
Q ss_pred hhHHHHH----HhhhhhhhhcC---CcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHH
Q 006357 240 DSLAILH----ESLGKGIVGIQ---GPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKS 312 (648)
Q Consensus 240 ~~~~~f~----~~~~~g~dg~~---g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s 312 (648)
......+ ........... .....|.+.++||+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 168 (249)
T cd02525 128 KAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVF--------------------------------------- 168 (249)
T ss_pred HHHHHHhhchhccCCccccccccccccccccccceEEHHHH---------------------------------------
Confidence 1111000 00000000000 1122333444444433
Q ss_pred HHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccc-cccchHHHHHHHHhCCcEEEEeCCCCCcccccC
Q 006357 313 AVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYG-SATEDILTGLMIHAKGWKTSYCSPDPHAFLGCG 391 (648)
Q Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~a 391 (648)
.++ +||+.. ...||.+++++++.+|+++.|++ +..+ .-..
T Consensus 169 -----------------------~~~--------------g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~-~~~~-~~~~ 209 (249)
T cd02525 169 -----------------------EKV--------------GGFDESLVRNEDAELNYRLRKAGYKIWLSP-DIRV-YYYP 209 (249)
T ss_pred -----------------------HHh--------------CCCCcccCccchhHHHHHHHHcCcEEEEcC-CeEE-EEcC
Confidence 233 245442 34799999999999999999995 5444 6788
Q ss_pred CCCHHHHHHHhhHhhchhHHHHH
Q 006357 392 PSDLPAAMRQQKRWAMGLLEILL 414 (648)
Q Consensus 392 P~tl~~~~~Qr~RWa~G~~qi~~ 414 (648)
|.+++.+++|+.||.+|..|...
T Consensus 210 ~~s~~~~~~~~~r~~~~~~~~~~ 232 (249)
T cd02525 210 RSTLKKLARQYFRYGKWRARTLR 232 (249)
T ss_pred CCCHHHHHHHHHHHhhhhHHHHH
Confidence 99999999999999999999986
No 34
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.75 E-value=1.5e-17 Score=162.98 Aligned_cols=134 Identities=24% Similarity=0.365 Sum_probs=105.4
Q ss_pred EEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc---ChhhhhHHHHHHh----hhhhhhhcCCc-cccccc
Q 006357 194 FMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY---DSPADSLAILHES----LGKGIVGIQGP-FYAGTG 265 (648)
Q Consensus 194 ~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~---D~~~~~~~~f~~~----~~~g~dg~~g~-~~~Gtg 265 (648)
+|+++|||+. +.||+|++++.++.| |++++||+|+.++ +...+.+...+.. .....+..+.+ ...|+|
T Consensus 1 ~v~~~DaDt~-~~~d~l~~~~~~~~~---~~~~~vq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 76 (193)
T PF13632_consen 1 YVLFLDADTR-LPPDFLERLVAALED---PKVDAVQGPIIFRNRGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSG 76 (193)
T ss_pred CEEEEcCCCC-CChHHHHHHHHHHhC---CCceEEEccEEecCCCChhheeehhhhhhhhhhhHHHHHhcCCCccccCcc
Confidence 5899999998 689999999999974 6899999999987 2223333333321 11222334443 357999
Q ss_pred ceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCCchhHHHHhhhhccccccc
Q 006357 266 TFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEY 345 (648)
Q Consensus 266 ~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~ 345 (648)
.++||+++. ++
T Consensus 77 ~~~r~~~l~--------------------------------------------------------------~v------- 87 (193)
T PF13632_consen 77 MLFRREALR--------------------------------------------------------------EV------- 87 (193)
T ss_pred eeeeHHHHH--------------------------------------------------------------Hh-------
Confidence 999999882 45
Q ss_pred ccccccccccc-cccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhhHhhchh
Q 006357 346 GSSWGKKVGWL-YGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGL 409 (648)
Q Consensus 346 ~t~wgk~~G~~-~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~ 409 (648)
+||+ ..+++||+++++++.++|||+.|++ +. .++.++|.|+.++++||+||..|.
T Consensus 88 -------g~~~~~~~~~ED~~l~~~l~~~G~~~~~~~-~~-~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 88 -------GGFDDPFSIGEDMDLGFRLRRAGYRIVYVP-DA-IVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred -------CcccccccccchHHHHHHHHHCCCEEEEec-cc-ceeeeCCCCHHHHHHHHHHHHhhh
Confidence 4898 8999999999999999999999996 44 358999999999999999999997
No 35
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.73 E-value=2.6e-15 Score=164.03 Aligned_cols=214 Identities=17% Similarity=0.087 Sum_probs=139.5
Q ss_pred CCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCCCCCCCCC
Q 006357 9 ELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGESAKPPST 88 (648)
Q Consensus 9 ~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~~~~~~~~ 88 (648)
+||. ..+.+++-|++++|||. +++|+|+|||++|.|.+.+.+..+
T Consensus 49 ~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~--------------------------------- 93 (384)
T TIGR03469 49 RNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR--------------------------------- 93 (384)
T ss_pred CCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH---------------------------------
Confidence 6776 66889999999999995 599999999999977444333110
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEEEEccCCC
Q 006357 89 SSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISREKRP 168 (648)
Q Consensus 89 ~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Yv~Rekr~ 168 (648)
+||. .+++.+++.+++|
T Consensus 94 ------------------------------------------------~~~~---------------~~~i~vi~~~~~~ 110 (384)
T TIGR03469 94 ------------------------------------------------AYGR---------------GDRLTVVSGQPLP 110 (384)
T ss_pred ------------------------------------------------hcCC---------------CCcEEEecCCCCC
Confidence 0000 0244555433322
Q ss_pred CCCCCCchHHHHHHHHhcCCCCC-----CcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc--Chhhhh
Q 006357 169 KHPHHYKAGAMNVLTRVSGLMTN-----APFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY--DSPADS 241 (648)
Q Consensus 169 g~~~~~KAGaLN~~L~~s~~~t~-----~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~--D~~~~~ 241 (648)
. ...+|+.|+|.|++. +. +|+++.+|||+. ++|++|++++..+.+ +++++|..+.++. +.+...
T Consensus 111 ~-g~~Gk~~A~n~g~~~----A~~~~~~gd~llflDaD~~-~~p~~l~~lv~~~~~---~~~~~vs~~~~~~~~~~~~~~ 181 (384)
T TIGR03469 111 P-GWSGKLWAVSQGIAA----ARTLAPPADYLLLTDADIA-HGPDNLARLVARARA---EGLDLVSLMVRLRCESFWEKL 181 (384)
T ss_pred C-CCcchHHHHHHHHHH----HhccCCCCCEEEEECCCCC-CChhHHHHHHHHHHh---CCCCEEEecccccCCCHHHHH
Confidence 1 235799999999994 45 999999999987 699999999999975 3345554433332 111111
Q ss_pred ----HHHHHHhhhh---hhhhcC-CcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHH
Q 006357 242 ----LAILHESLGK---GIVGIQ-GPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSA 313 (648)
Q Consensus 242 ----~~~f~~~~~~---g~dg~~-g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~ 313 (648)
...++....+ ..+... .....|.+.++||+++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~---------------------------------------- 221 (384)
T TIGR03469 182 LIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREAL---------------------------------------- 221 (384)
T ss_pred HHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHH----------------------------------------
Confidence 1111111110 011111 1123566677777776
Q ss_pred HHhhcCCCCCCCCCchhHHHHhhhhccccccccccccccccccc--ccccchHHHHHHHHhCCcEEEEeCCCCCcccccC
Q 006357 314 VDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLY--GSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCG 391 (648)
Q Consensus 314 ~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~--~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~a 391 (648)
.++ |||+. ..+.||++++.++..+|+++.+.... ..+....
T Consensus 222 ----------------------~~v--------------GGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~-~~~s~r~ 264 (384)
T TIGR03469 222 ----------------------ERI--------------GGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAA-RTRSLRP 264 (384)
T ss_pred ----------------------HHc--------------CCHHHHhhCcccHHHHHHHHHHcCCcEEEEecC-ceEEEEe
Confidence 244 37764 56899999999999999999998643 3333456
Q ss_pred CCCHHHHHHHhhHhh
Q 006357 392 PSDLPAAMRQQKRWA 406 (648)
Q Consensus 392 P~tl~~~~~Qr~RWa 406 (648)
-+++++.++|+.||.
T Consensus 265 ~~~~~~~~~~~~r~~ 279 (384)
T TIGR03469 265 YDGLGEIWRMIARTA 279 (384)
T ss_pred cCCHHHHHHHHHHhH
Confidence 679999999999995
No 36
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.73 E-value=9.7e-15 Score=157.89 Aligned_cols=214 Identities=17% Similarity=0.216 Sum_probs=157.1
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc-
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY- 235 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~- 235 (648)
-++-|-.|.+ |.+.||||+....|..| +.+++++|+|||..+ .+|.+-+.+..|. .+|+.|.+||--.--
T Consensus 212 ~~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvM-tgd~lvrLv~~ME--~~P~aGlIQt~P~~~g 282 (736)
T COG2943 212 GNIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSVM-TGDCLVRLVRLME--ANPDAGLIQTSPKASG 282 (736)
T ss_pred CceeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeeccccc-CchHHHHHHHHHh--hCCCCceeecchhhcC
Confidence 3456666666 44589999999999887 899999999999986 8999999999986 359999999854333
Q ss_pred -C-hhh---hh-HHHHHHhhhhhhhhcCCc--ccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcH
Q 006357 236 -D-SPA---DS-LAILHESLGKGIVGIQGP--FYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSK 307 (648)
Q Consensus 236 -D-~~~---~~-~~~f~~~~~~g~dg~~g~--~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~ 307 (648)
| .|+ +- .+++=-+...|+.-|++. -|=|-|+++|-++..+ +.
T Consensus 283 g~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~--------------------------hc---- 332 (736)
T COG2943 283 GDTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIE--------------------------HC---- 332 (736)
T ss_pred cchHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHH--------------------------hc----
Confidence 1 222 11 122333455677777653 4568888888877631 00
Q ss_pred HHHHHHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcc
Q 006357 308 EFIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAF 387 (648)
Q Consensus 308 ~~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~ 387 (648)
|.+-.+| ++.|....++.|+.-+-.|.+.||-+--. ++-..+
T Consensus 333 -----------gLp~LpG--------------------------~~pFgG~ilSHDfvEAALmRRaGW~v~ia-~dL~GS 374 (736)
T COG2943 333 -----------GLPPLPG--------------------------RGPFGGHILSHDFVEAALMRRAGWGVWIA-YDLDGS 374 (736)
T ss_pred -----------CCCCCCC--------------------------CCCCCccccchHHHHHHHHhhcCceEEEe-ccCCCc
Confidence 1111111 24566677899999999999999988655 466678
Q ss_pred cccCCCCHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHH
Q 006357 388 LGCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVA 454 (648)
Q Consensus 388 ~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~ 454 (648)
+.|.|.|+-+.++.-+|||+|++|-+ +++.. +++.+..|++++.+++.|+++....++++
T Consensus 375 yEE~PpnLlD~l~RDRRWC~GNLqh~-----rl~~~--~GlHwvsR~h~~tGVmsYlsaPlWfl~ll 434 (736)
T COG2943 375 YEELPPNLLDELKRDRRWCHGNLQHF-----RLFLV--KGLHWVSRAHFLTGVMSYLSAPLWFLFLL 434 (736)
T ss_pred hhhCCchHHHHHhhhhHhhhcchhhc-----eeecc--CCccHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 99999999999999999999999976 36653 89999999999999877776644333333
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.64 E-value=3.2e-15 Score=147.08 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=79.8
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcC-------CCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEc
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSG-------LMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQ 229 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~-------~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ 229 (648)
+++.++.++... ...+|++|+|.|++.+. .-.++|+|+++|+|.. ++|++|+++..+|.| ++++.||
T Consensus 50 ~~v~~i~~~~~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~-~~~~~l~~~~~~~~~---~~v~~v~ 123 (191)
T cd06436 50 SRVHLLRRHLPN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGR-LDPNALEAVAPYFSD---PRVAGTQ 123 (191)
T ss_pred CcEEEEeccCCc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCC-cCHhHHHHHHHhhcC---CceEEEe
Confidence 445666553211 12369999999998531 0123589999999988 699999998888864 7899999
Q ss_pred CCccccChhhh--------hHHHHHHhhhhhhhhcCCcccccccceeehhhh
Q 006357 230 SPQYFYDSPAD--------SLAILHESLGKGIVGIQGPFYAGTGTFHRRKVI 273 (648)
Q Consensus 230 ~PQ~f~D~~~~--------~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL 273 (648)
.+..+++.-.+ +....+..++.++...+...+.|+|+++||++|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l 175 (191)
T cd06436 124 SRVRMYNRHKNLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSAL 175 (191)
T ss_pred eeEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHH
Confidence 99887743222 233344567778877776667899999999998
No 38
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.61 E-value=5e-15 Score=144.19 Aligned_cols=96 Identities=15% Similarity=0.077 Sum_probs=66.7
Q ss_pred CCchHHHHHHHHhcC-CCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccCh----hh----hhHH
Q 006357 173 HYKAGAMNVLTRVSG-LMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDS----PA----DSLA 243 (648)
Q Consensus 173 ~~KAGaLN~~L~~s~-~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~----~~----~~~~ 243 (648)
.+|++|+|.+++... ..+++++++++|||+. ++|++|.+++..|.+. ...||+.....++ +. -...
T Consensus 62 ~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~-~~p~~l~~l~~~~~~~----~~~v~g~~~~~~~~~~~~~~~~~~~~~ 136 (183)
T cd06438 62 RGKGYALDFGFRHLLNLADDPDAVVVFDADNL-VDPNALEELNARFAAG----ARVVQAYYNSKNPDDSWITRLYAFAFL 136 (183)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC-CChhHHHHHHHHHhhC----CCeeEEEEeeeCCccCHHHHHHHHHHH
Confidence 469999999998531 1246999999999988 6899999999999742 2456765444311 11 1223
Q ss_pred HHHHhhhhhhhhcCCcc-cccccceeehhhh
Q 006357 244 ILHESLGKGIVGIQGPF-YAGTGTFHRRKVI 273 (648)
Q Consensus 244 ~f~~~~~~g~dg~~g~~-~~Gtg~~~RR~aL 273 (648)
.++.....++..+++.. ..|+|+++||+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 137 VFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred HHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 34445555677777654 5799999999887
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.54 E-value=1.2e-13 Score=135.14 Aligned_cols=114 Identities=19% Similarity=0.204 Sum_probs=85.0
Q ss_pred CCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCCCCCCCCC
Q 006357 9 ELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGESAKPPST 88 (648)
Q Consensus 9 ~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~~~~~~~~ 88 (648)
++|.+..+.+|+.|+++..|| .++|+|+|||+++-|...+.+
T Consensus 10 ~n~~~~~l~~~l~sl~~q~~~--~~eiivvd~gs~d~~~~~~~~------------------------------------ 51 (202)
T cd04184 10 YNTPEKYLREAIESVRAQTYP--NWELCIADDASTDPEVKRVLK------------------------------------ 51 (202)
T ss_pred ccCcHHHHHHHHHHHHhCcCC--CeEEEEEeCCCCChHHHHHHH------------------------------------
Confidence 788878899999999999999 689999999998854333322
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEEEEccCCC
Q 006357 89 SSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIYISREKRP 168 (648)
Q Consensus 89 ~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Yv~Rekr~ 168 (648)
.|. . ..+++.++..+.+
T Consensus 52 --------------~~~---~---------------------------------------------~~~~~~~~~~~~~- 68 (202)
T cd04184 52 --------------KYA---A---------------------------------------------QDPRIKVVFREEN- 68 (202)
T ss_pred --------------HHH---h---------------------------------------------cCCCEEEEEcccC-
Confidence 111 0 0133444444432
Q ss_pred CCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccc
Q 006357 169 KHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYF 234 (648)
Q Consensus 169 g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f 234 (648)
.+++.|+|.|++ .++++|++++|+|++ ++|++|.+++..+.. ++++++|+++...
T Consensus 69 ----~g~~~a~n~g~~----~a~~d~i~~ld~D~~-~~~~~l~~~~~~~~~--~~~~~~v~~~~~~ 123 (202)
T cd04184 69 ----GGISAATNSALE----LATGEFVALLDHDDE-LAPHALYEVVKALNE--HPDADLIYSDEDK 123 (202)
T ss_pred ----CCHHHHHHHHHH----hhcCCEEEEECCCCc-CChHHHHHHHHHHHh--CCCCCEEEccHHh
Confidence 368999999999 688999999999997 699999999999842 2667788765543
No 40
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.50 E-value=2.2e-13 Score=133.21 Aligned_cols=149 Identities=17% Similarity=0.198 Sum_probs=111.9
Q ss_pred CCchHHHHHHHHhcCCC-CCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc--ChhhhhHH-HHHHh
Q 006357 173 HYKAGAMNVLTRVSGLM-TNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY--DSPADSLA-ILHES 248 (648)
Q Consensus 173 ~~KAGaLN~~L~~s~~~-t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~--D~~~~~~~-~f~~~ 248 (648)
+.|.+||.++++ . .++|++++.|+|+. ++|++|++++..|.| |++|.|.++..+. +.+..... .++..
T Consensus 16 N~Kv~nL~~~~~----~~a~~d~~~~~DsDi~-v~p~~L~~lv~~l~~---p~vglVt~~~~~~~~~~~~~~l~~~~~~~ 87 (175)
T PF13506_consen 16 NPKVNNLAQGLE----AGAKYDYLVISDSDIR-VPPDYLRELVAPLAD---PGVGLVTGLPRGVPARGFWSRLEAAFFNF 87 (175)
T ss_pred ChHHHHHHHHHH----hhCCCCEEEEECCCee-ECHHHHHHHHHHHhC---CCCcEEEecccccCCcCHHHHHHHHHHhH
Confidence 589999999999 5 89999999999988 589999999999986 6799999876655 33333222 22211
Q ss_pred hhhhhh-hcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCC
Q 006357 249 LGKGIV-GIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSN 327 (648)
Q Consensus 249 ~~~g~d-g~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~ 327 (648)
...-.. .-+.++..|....+||++|.
T Consensus 88 ~~~~~~a~~~~~~~~G~~m~~rr~~L~----------------------------------------------------- 114 (175)
T PF13506_consen 88 LPGVLQALGGAPFAWGGSMAFRREALE----------------------------------------------------- 114 (175)
T ss_pred HHHHHHHhcCCCceecceeeeEHHHHH-----------------------------------------------------
Confidence 111111 22456778999999999882
Q ss_pred chhHHHHhhhhccccccccccccccccccc--ccccchHHHHHHHHhCCcEEEEeCCCCCcccccCC----CCHHHHHHH
Q 006357 328 LSDSLKAANQVAGCGYEYGSSWGKKVGWLY--GSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGP----SDLPAAMRQ 401 (648)
Q Consensus 328 ~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~--~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP----~tl~~~~~Q 401 (648)
++ ||+.. +.++||+.++-+++.+|||++..+ .+. .....| .++++++++
T Consensus 115 ---------~~--------------GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~-~~v-~~~~~~~~~~~s~~~~~~r 169 (175)
T PF13506_consen 115 ---------EI--------------GGFEALADYLADDYALGRRLRARGYRVVLSP-YPV-VQTSVPRTLEDSFRDFFRR 169 (175)
T ss_pred ---------Hc--------------ccHHHHhhhhhHHHHHHHHHHHCCCeEEEcc-hhe-eecccCccccccHHHHHHH
Confidence 22 25543 678999999999999999999985 433 356666 489999999
Q ss_pred hhHhhc
Q 006357 402 QKRWAM 407 (648)
Q Consensus 402 r~RWa~ 407 (648)
+.||++
T Consensus 170 ~~RW~r 175 (175)
T PF13506_consen 170 QLRWAR 175 (175)
T ss_pred HHhhcC
Confidence 999985
No 41
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.49 E-value=4.5e-13 Score=131.23 Aligned_cols=65 Identities=14% Similarity=0.105 Sum_probs=52.9
Q ss_pred EEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc
Q 006357 159 LIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY 235 (648)
Q Consensus 159 l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~ 235 (648)
+.++.++++. ++++|+|.|++ .++|+||+++|+|.+ +.|++|.+++..|.+ ++++++|.+....+
T Consensus 57 i~~i~~~~n~-----G~~~a~N~g~~----~a~gd~i~~lD~Dd~-~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ 121 (201)
T cd04195 57 LKVVPLEKNR-----GLGKALNEGLK----HCTYDWVARMDTDDI-SLPDRFEKQLDFIEK--NPEIDIVGGGVLEF 121 (201)
T ss_pred eEEEEcCccc-----cHHHHHHHHHH----hcCCCEEEEeCCccc-cCcHHHHHHHHHHHh--CCCeEEEcccEEEE
Confidence 5666666533 58999999999 689999999999998 689999999999963 36788888765443
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.40 E-value=4.8e-12 Score=122.49 Aligned_cols=55 Identities=13% Similarity=0.047 Sum_probs=44.1
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY 235 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~ 235 (648)
++++|+|.|++ .++++||+++|+|.. +.|+.+.+.+..+.. .++..+|.....+.
T Consensus 62 g~~~a~n~~~~----~a~~~~v~~ld~D~~-~~~~~~~~~~~~~~~--~~~~~~v~g~~~~~ 116 (202)
T cd06433 62 GIYDAMNKGIA----LATGDIIGFLNSDDT-LLPGALLAVVAAFAE--HPEVDVVYGDVLLV 116 (202)
T ss_pred CHHHHHHHHHH----HcCCCEEEEeCCCcc-cCchHHHHHHHHHHh--CCCccEEEeeeEEE
Confidence 59999999999 689999999999998 589999999966542 25677777655443
No 43
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.38 E-value=1.8e-11 Score=128.83 Aligned_cols=109 Identities=16% Similarity=0.078 Sum_probs=85.8
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|.|+| ++|++..+..++-|+++..||....+|+|+|||+++.|.+.+.+...
T Consensus 2 IIIp~---~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~------------------------- 53 (299)
T cd02510 2 VIIIF---HNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYY------------------------- 53 (299)
T ss_pred EEEEE---ecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHH-------------------------
Confidence 45677 89998999999999999999866679999999999976443333000
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
. ...|++.
T Consensus 54 ----------------------------~--------------------------------------------~~~~~v~ 61 (299)
T cd02510 54 ----------------------------K--------------------------------------------KYLPKVK 61 (299)
T ss_pred ----------------------------h--------------------------------------------hcCCcEE
Confidence 0 0125566
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
++..+++. +++.|.|.|++ .++||+|+.+|+|+. ++|++|.+++..+..
T Consensus 62 vi~~~~n~-----G~~~a~N~g~~----~A~gd~i~fLD~D~~-~~~~wL~~ll~~l~~ 110 (299)
T cd02510 62 VLRLKKRE-----GLIRARIAGAR----AATGDVLVFLDSHCE-VNVGWLEPLLARIAE 110 (299)
T ss_pred EEEcCCCC-----CHHHHHHHHHH----HccCCEEEEEeCCcc-cCccHHHHHHHHHHh
Confidence 77665533 59999999999 689999999999988 589999999999974
No 44
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.36 E-value=8e-12 Score=122.91 Aligned_cols=119 Identities=18% Similarity=0.132 Sum_probs=88.0
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|.|.| |+|+ ..+.+++.|++.++|| +++|+|+|||+++.|.+.+.+..+
T Consensus 2 IvIp~---yn~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~------------------------- 50 (214)
T cd04196 2 VLMAT---YNGE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYID------------------------- 50 (214)
T ss_pred EEEEe---cCcH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHh-------------------------
Confidence 34666 7777 6789999999999999 899999999999976444333100
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
.|| +.+.
T Consensus 51 --------------------------------------------------------~~~-----------------~~~~ 57 (214)
T cd04196 51 --------------------------------------------------------KDP-----------------FIII 57 (214)
T ss_pred --------------------------------------------------------cCC-----------------ceEE
Confidence 000 1233
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY 235 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~ 235 (648)
++..+++ +++++|+|.+++ .+++|||+++|+|.+ ..|+.|.+++..+.. ++..+++.+.....
T Consensus 58 ~~~~~~~-----~G~~~~~n~g~~----~~~g~~v~~ld~Dd~-~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ 120 (214)
T cd04196 58 LIRNGKN-----LGVARNFESLLQ----AADGDYVFFCDQDDI-WLPDKLERLLKAFLK--DDKPLLVYSDLELV 120 (214)
T ss_pred EEeCCCC-----ccHHHHHHHHHH----hCCCCEEEEECCCcc-cChhHHHHHHHHHhc--CCCceEEecCcEEE
Confidence 4444443 469999999999 689999999999987 589999999999653 36677777765543
No 45
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.35 E-value=3.2e-11 Score=113.19 Aligned_cols=64 Identities=19% Similarity=0.181 Sum_probs=53.3
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccChhhhhHHHHHHhhhhhh
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADSLAILHESLGKGI 253 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~~~~~~~~f~~~~~~g~ 253 (648)
++++|+|.+++ .+++++++.+|+|.+ +.|+++.+++..+.+ .+++++++..
T Consensus 61 g~~~a~n~~~~----~~~~~~i~~~D~D~~-~~~~~l~~~~~~~~~--~~~~~~~~~~---------------------- 111 (166)
T cd04186 61 GFGAGNNQGIR----EAKGDYVLLLNPDTV-VEPGALLELLDAAEQ--DPDVGIVGPK---------------------- 111 (166)
T ss_pred ChHHHhhHHHh----hCCCCEEEEECCCcE-ECccHHHHHHHHHHh--CCCceEEEcc----------------------
Confidence 69999999999 679999999999987 689999999998764 3678777632
Q ss_pred hhcCCcccccccceeehhhh
Q 006357 254 VGIQGPFYAGTGTFHRRKVI 273 (648)
Q Consensus 254 dg~~g~~~~Gtg~~~RR~aL 273 (648)
..|.+.++||+++
T Consensus 112 -------~~~~~~~~~~~~~ 124 (166)
T cd04186 112 -------VSGAFLLVRREVF 124 (166)
T ss_pred -------CceeeEeeeHHHH
Confidence 5677888888877
No 46
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.33 E-value=4e-11 Score=119.03 Aligned_cols=41 Identities=17% Similarity=0.132 Sum_probs=35.9
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
+|++|+|.|++ .+++++|+++|+|.+ ++|+++.+++..+.+
T Consensus 59 g~~~a~n~g~~----~a~~~~i~~~D~D~~-~~~~~l~~l~~~~~~ 99 (221)
T cd02522 59 GRARQMNAGAA----AARGDWLLFLHADTR-LPPDWDAAIIETLRA 99 (221)
T ss_pred CHHHHHHHHHH----hccCCEEEEEcCCCC-CChhHHHHHHHHhhc
Confidence 58999999999 678999999999987 689999998776653
No 47
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.31 E-value=7.3e-11 Score=113.57 Aligned_cols=39 Identities=18% Similarity=0.282 Sum_probs=36.4
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHh
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLL 217 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f 217 (648)
+|++|+|.+++ .+++|+|+.+|+|.+ +.|++|.+++..+
T Consensus 66 ~~~~~~n~g~~----~a~g~~i~~lD~D~~-~~~~~l~~~~~~~ 104 (182)
T cd06420 66 RKAKIRNKAIA----AAKGDYLIFIDGDCI-PHPDFIADHIELA 104 (182)
T ss_pred hHHHHHHHHHH----HhcCCEEEEEcCCcc-cCHHHHHHHHHHh
Confidence 69999999999 789999999999987 6999999999988
No 48
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.24 E-value=1.2e-08 Score=114.76 Aligned_cols=168 Identities=15% Similarity=0.146 Sum_probs=98.5
Q ss_pred CCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccC-------hhhhhHHHHHHhhhhhhhhcCCcccc
Q 006357 190 TNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYD-------SPADSLAILHESLGKGIVGIQGPFYA 262 (648)
Q Consensus 190 t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D-------~~~~~~~~f~~~~~~g~dg~~g~~~~ 262 (648)
...|||+.+|||+. .+|+.+.+++.-+.+ |++++-|..--+-.+ .++.-.-..=+.++++....-|.+.|
T Consensus 200 ~~~~~il~~DaDt~-~~p~~~~~lv~~m~~--d~~i~gvCG~t~i~n~~~s~~t~~Q~fEY~ish~l~Ka~Es~fG~VtC 276 (527)
T PF03142_consen 200 DFYEYILMVDADTK-FDPDSVNRLVDAMER--DPKIGGVCGETRIDNKGQSWWTMYQVFEYAISHHLQKAFESVFGSVTC 276 (527)
T ss_pred cceEEEEEecCCce-EcHHHHHHHHHHHcC--CCCeEEEeceeEEcCCCCCHhhheeccchhHHHHHHHHHHHHhCceee
Confidence 45699999999998 599999999999863 477777765322111 11111111113334444444444443
Q ss_pred --cccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCCCCchhHHHHhhhhcc
Q 006357 263 --GTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFSSNLSDSLKAANQVAG 340 (648)
Q Consensus 263 --Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~ 340 (648)
|.-+++|-+|+.+.+....+ .....+....|... ..+...+
T Consensus 277 LPGcfsmyR~~a~~~~~~~~~p----------~l~~~~i~~~Y~~~------------------------~~dtlh~--- 319 (527)
T PF03142_consen 277 LPGCFSMYRISALMDGDGYWVP----------LLISPDIIEKYSEN------------------------PVDTLHQ--- 319 (527)
T ss_pred cCCcceeeeeehhccccccccc----------cccchHHHHHHhhc------------------------cchHHHH---
Confidence 66667898888531100000 00001111111100 0000000
Q ss_pred cccccccccccccccccccccchHHHHHHHHhC--CcEEEEeCCCCCcccccCCCCHHHHHHHhhHhhchhHHHH
Q 006357 341 CGYEYGSSWGKKVGWLYGSATEDILTGLMIHAK--GWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRWAMGLLEIL 413 (648)
Q Consensus 341 c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~--Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~~qi~ 413 (648)
..-..+.||=.++..|..+ |||..|++ +..| ++.+|+|++.+++||+||..|++--+
T Consensus 320 --------------~nl~~lGEDR~LttLlLk~~~~~k~~y~~-~A~a-~T~aP~t~~vflsQRRRWinSTi~Nl 378 (527)
T PF03142_consen 320 --------------KNLLDLGEDRWLTTLLLKQFPGYKTEYVP-SAVA-YTDAPETFSVFLSQRRRWINSTIHNL 378 (527)
T ss_pred --------------HhhhhcchhHHHHHHHHhhCCCceEEEcc-cccc-cccCCccHHHHHHHhhhccchhHhhH
Confidence 0012468999998777776 89999996 4445 89999999999999999999987443
No 49
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.24 E-value=3.8e-10 Score=112.77 Aligned_cols=110 Identities=13% Similarity=0.081 Sum_probs=79.2
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCC
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGE 81 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~ 81 (648)
.|.| |+|+ ..+.+++-|+++.+|| +.++++|+|||+++.|.+.+.+
T Consensus 2 iIp~---yn~~-~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~----------------------------- 47 (219)
T cd06913 2 ILPV---HNGE-QWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEK----------------------------- 47 (219)
T ss_pred EEee---cCcH-HHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHH-----------------------------
Confidence 4555 6664 6899999999999999 4799999999999977433322
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEE
Q 006357 82 SAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIY 161 (648)
Q Consensus 82 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Y 161 (648)
|. .+.+ .+++.+
T Consensus 48 ----------------------~~---~~~~-------------------------------------------~~~~~~ 59 (219)
T cd06913 48 ----------------------WR---KKLE-------------------------------------------DSGVIV 59 (219)
T ss_pred ----------------------HH---HhCc-------------------------------------------ccCeEE
Confidence 11 1000 133455
Q ss_pred EEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 162 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 162 v~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
+..+++.+ ...+.+.|+|.|++ .++||+++.+|+|.. .+|+.+.+.+..+.+
T Consensus 60 ~~~~~~~~-~~~G~~~a~N~g~~----~a~gd~i~~lD~D~~-~~~~~l~~~~~~~~~ 111 (219)
T cd06913 60 LVGSHNSP-SPKGVGYAKNQAIA----QSSGRYLCFLDSDDV-MMPQRIRLQYEAALQ 111 (219)
T ss_pred EEecccCC-CCccHHHHHHHHHH----hcCCCEEEEECCCcc-CChhHHHHHHHHHHh
Confidence 54443222 22468999999999 689999999999987 589999998888764
No 50
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.23 E-value=4.3e-10 Score=111.88 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=43.2
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
+.+.++..+++. +|++|+|.|++ .+.+|+|+.+|+|.. ++|++|.+++..+.+
T Consensus 53 ~~i~~~~~~~n~-----G~~~a~n~g~~----~a~gd~i~~lD~D~~-~~~~~l~~l~~~~~~ 105 (224)
T cd06442 53 PRVRLIVRPGKR-----GLGSAYIEGFK----AARGDVIVVMDADLS-HPPEYIPELLEAQLE 105 (224)
T ss_pred CceEEEecCCCC-----ChHHHHHHHHH----HcCCCEEEEEECCCC-CCHHHHHHHHHHHhc
Confidence 334555555533 59999999999 688999999999987 689999999999765
No 51
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.23 E-value=3.7e-10 Score=110.98 Aligned_cols=61 Identities=13% Similarity=0.158 Sum_probs=46.1
Q ss_pred EEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEc
Q 006357 159 LIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQ 229 (648)
Q Consensus 159 l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ 229 (648)
+.|+.-++.. +++.++|.+++..- ..++|+++++|+|.+ ++|+++++++..+.+ ++++.+.
T Consensus 53 i~~~~~~~n~-----g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~-~~~~~l~~l~~~~~~---~~~~~~~ 113 (202)
T cd04185 53 IVYLRLPENL-----GGAGGFYEGVRRAY-ELGYDWIWLMDDDAI-PDPDALEKLLAYADK---DNPQFLA 113 (202)
T ss_pred eEEEECcccc-----chhhHHHHHHHHHh-ccCCCEEEEeCCCCC-cChHHHHHHHHHHhc---CCceEec
Confidence 4555554422 47889999888542 367999999999987 689999999999863 5677664
No 52
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.22 E-value=9.3e-11 Score=117.86 Aligned_cols=69 Identities=20% Similarity=0.230 Sum_probs=46.3
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHH--HHhhcCCCCcEEEEcCCccc
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAM--CLLLGSKEGDCAFVQSPQYF 234 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v--~~f~d~~~~~va~VQ~PQ~f 234 (648)
+++.++..+++. ++++|+|.|++.+. -.++|+|+.+|+|.. ++|++|.+++ .-... .++.++.++ |+..
T Consensus 47 ~~i~~i~~~~n~-----G~~~a~N~g~~~a~-~~~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~-~~~~~~~~~-~~~~ 117 (237)
T cd02526 47 EKIELIHLGENL-----GIAKALNIGIKAAL-ENGADYVLLFDQDSV-PPPDMVEKLLAYKILSD-KNSNIGAVG-PRII 117 (237)
T ss_pred CcEEEEECCCce-----ehHHhhhHHHHHHH-hCCCCEEEEECCCCC-cCHhHHHHHHHHHHhhc-cCCCeEEEe-eeEE
Confidence 345666666533 49999999999421 014599999999988 6899999996 22221 236676664 4433
No 53
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.17 E-value=1.6e-10 Score=107.70 Aligned_cols=117 Identities=23% Similarity=0.300 Sum_probs=85.0
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|-|+| ++|+ ..+.+|+.|++...|+ ..+++|+|||+++.|.+.+.+...
T Consensus 1 Viip~---~n~~-~~l~~~l~sl~~q~~~--~~~iivvdd~s~d~t~~~~~~~~~------------------------- 49 (180)
T cd06423 1 IIVPA---YNEE-AVIERTIESLLALDYP--KLEVIVVDDGSTDDTLEILEELAA------------------------- 49 (180)
T ss_pred Ceecc---cChH-HHHHHHHHHHHhCCCC--ceEEEEEeCCCccchHHHHHHHhc-------------------------
Confidence 34566 7887 8999999999999996 899999999999865332222000
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
. ..+...
T Consensus 50 --------------------------------~-----------------------------------------~~~~~~ 56 (180)
T cd06423 50 --------------------------------L-----------------------------------------YIRRVL 56 (180)
T ss_pred --------------------------------c-----------------------------------------ccceEE
Confidence 0 002334
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcc
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQY 233 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~ 233 (648)
++..+++ .+|+.|+|.+++ .+++++|+++|+|.. +.|++|.+++..+.. +++++.|...+.
T Consensus 57 ~~~~~~~-----~g~~~~~n~~~~----~~~~~~i~~~D~D~~-~~~~~l~~~~~~~~~--~~~~~~v~~~~~ 117 (180)
T cd06423 57 VVRDKEN-----GGKAGALNAGLR----HAKGDIVVVLDADTI-LEPDALKRLVVPFFA--DPKVGAVQGRVR 117 (180)
T ss_pred EEEeccc-----CCchHHHHHHHH----hcCCCEEEEECCCCC-cChHHHHHHHHHhcc--CCCeeeEeeeEE
Confidence 5555443 359999999999 579999999999987 589999999666653 366777765543
No 54
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.15 E-value=2e-09 Score=109.79 Aligned_cols=61 Identities=11% Similarity=0.114 Sum_probs=46.6
Q ss_pred cEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCC
Q 006357 158 HLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSP 231 (648)
Q Consensus 158 ~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~P 231 (648)
++.++.++++. +|++|+|.|++ .+++|+|+++|+|.. ++|++|.+++..+.+ ++..+|..+
T Consensus 69 ~v~~~~~~~n~-----G~~~a~n~g~~----~a~g~~i~~lD~D~~-~~~~~l~~l~~~~~~---~~~~~v~g~ 129 (243)
T PLN02726 69 RILLRPRPGKL-----GLGTAYIHGLK----HASGDFVVIMDADLS-HHPKYLPSFIKKQRE---TGADIVTGT 129 (243)
T ss_pred cEEEEecCCCC-----CHHHHHHHHHH----HcCCCEEEEEcCCCC-CCHHHHHHHHHHHHh---cCCcEEEEc
Confidence 34555544433 59999999999 688999999999987 699999999999864 344555543
No 55
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.06 E-value=6e-09 Score=103.45 Aligned_cols=50 Identities=18% Similarity=0.095 Sum_probs=41.4
Q ss_pred EEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 160 IYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 160 ~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
.++..+++. +|++|+|.|++ .+++++|+.+|+|.. .+|+.+.+++..+.+
T Consensus 60 ~~i~~~~n~-----G~~~a~~~g~~----~a~gd~i~~ld~D~~-~~~~~l~~l~~~~~~ 109 (211)
T cd04188 60 RVLTLPKNR-----GKGGAVRAGML----AARGDYILFADADLA-TPFEELEKLEEALKT 109 (211)
T ss_pred EEEEcccCC-----CcHHHHHHHHH----HhcCCEEEEEeCCCC-CCHHHHHHHHHHHhc
Confidence 455544433 59999999999 688999999999987 689999999999764
No 56
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.04 E-value=3.9e-10 Score=105.14 Aligned_cols=158 Identities=19% Similarity=0.145 Sum_probs=107.5
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|.|+| |+| +..+..++.|++...++ ..+++|+|||+++.|...+.+..+
T Consensus 2 vvip~---~n~-~~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~~~~~~~~~~~------------------------- 50 (169)
T PF00535_consen 2 VVIPT---YNE-AEYLERTLESLLKQTDP--DFEIIVVDDGSTDETEEILEEYAE------------------------- 50 (169)
T ss_dssp EEEEE---SS--TTTHHHHHHHHHHHSGC--EEEEEEEECS-SSSHHHHHHHHHC-------------------------
T ss_pred EEEEe---eCC-HHHHHHHHHHHhhccCC--CEEEEEeccccccccccccccccc-------------------------
Confidence 45677 788 78888999999999666 899999999998865333222100
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
..+++.
T Consensus 51 --------------------------------------------------------------------------~~~~i~ 56 (169)
T PF00535_consen 51 --------------------------------------------------------------------------SDPNIR 56 (169)
T ss_dssp --------------------------------------------------------------------------CSTTEE
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 026688
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccC-h-h
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYD-S-P 238 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D-~-~ 238 (648)
|+.++++. ++++|+|.|++ .++++|++.+|+|.+ +.|++|.+++..+.+.. ..+.+...+....+ . .
T Consensus 57 ~i~~~~n~-----g~~~~~n~~~~----~a~~~~i~~ld~D~~-~~~~~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~ 125 (169)
T PF00535_consen 57 YIRNPENL-----GFSAARNRGIK----HAKGEYILFLDDDDI-ISPDWLEELVEALEKNP-PDVVIGSVIYIDDDNRYP 125 (169)
T ss_dssp EEEHCCCS-----HHHHHHHHHHH----H--SSEEEEEETTEE-E-TTHHHHHHHHHHHCT-TEEEEEEEEEEECTTETE
T ss_pred cccccccc-----ccccccccccc----ccceeEEEEeCCCce-EcHHHHHHHHHHHHhCC-CcEEEEEEEEecCCcccc
Confidence 99998732 69999999999 689999999999988 58999999999998632 33433333322221 1 1
Q ss_pred hh-----hHHHHHHhhhhhhhhcCCcccccccceeehhhhh
Q 006357 239 AD-----SLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIY 274 (648)
Q Consensus 239 ~~-----~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~ 274 (648)
.. .....+.............+++|.++++||+++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 166 (169)
T PF00535_consen 126 DRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFE 166 (169)
T ss_dssp ECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHH
T ss_pred ccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHH
Confidence 11 1123334445555667778899999999999883
No 57
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.03 E-value=4.4e-09 Score=112.89 Aligned_cols=59 Identities=19% Similarity=0.169 Sum_probs=46.3
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEE
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAF 227 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~ 227 (648)
|++.+++.+| .+.++|.|.|++ .++|+||+.+|+|.+ ..|+.+.+++..+.++ +.+++.
T Consensus 61 ~~i~vi~~~n------~G~~~arN~gl~----~a~g~yi~flD~DD~-~~p~~l~~l~~~~~~~-~~dvv~ 119 (328)
T PRK10073 61 PHVRLLHQAN------AGVSVARNTGLA----VATGKYVAFPDADDV-VYPTMYETLMTMALED-DLDVAQ 119 (328)
T ss_pred CCEEEEECCC------CChHHHHHHHHH----hCCCCEEEEECCCCc-cChhHHHHHHHHHHhC-CCCEEE
Confidence 5566666443 469999999999 799999999999998 5899999999987642 244543
No 58
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.00 E-value=4.8e-09 Score=109.24 Aligned_cols=66 Identities=18% Similarity=0.072 Sum_probs=49.8
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcC
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQS 230 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~ 230 (648)
|++.|+..+++. +.|+|+|.|++..- ..++|+|+.+|.|.. ++|++|.+++..+..+ ..++++|+.
T Consensus 45 ~~i~~i~~~~N~-----G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~-~~~~~~~~~ 110 (281)
T TIGR01556 45 QKIALIHLGDNQ-----GIAGAQNQGLDASF-RRGVQGVLLLDQDSR-PGNAFLAAQWKLLSAE-NGQACALGP 110 (281)
T ss_pred CCeEEEECCCCc-----chHHHHHHHHHHHH-HCCCCEEEEECCCCC-CCHHHHHHHHHHHHhc-CCceEEECC
Confidence 556777765544 49999999998421 137899999999987 6899999999988631 137888863
No 59
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.92 E-value=1.6e-08 Score=106.13 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=47.5
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEc
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQ 229 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ 229 (648)
+++.|+..+++. +++.|+|.|++ .++|+||+.+|+|.+. .|+.|.+.+.++.. .+..+++-
T Consensus 60 ~ri~~i~~~~n~-----G~~~a~N~gi~----~a~g~~I~~lDaDD~~-~p~~l~~~~~~~~~--~~~~~~~~ 120 (279)
T PRK10018 60 PRITYIHNDINS-----GACAVRNQAIM----LAQGEYITGIDDDDEW-TPNRLSVFLAHKQQ--LVTHAFLY 120 (279)
T ss_pred CCEEEEECCCCC-----CHHHHHHHHHH----HcCCCEEEEECCCCCC-CccHHHHHHHHHHh--CCCccEEE
Confidence 567777766533 59999999999 7999999999999984 89999999988752 13444443
No 60
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.90 E-value=3.4e-08 Score=95.06 Aligned_cols=119 Identities=18% Similarity=0.155 Sum_probs=87.1
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|.|+| |+|+ ..+.+|+.|+....|+....+++|+|||+++-|.+.+.+
T Consensus 1 iii~~---~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~---------------------------- 48 (185)
T cd04179 1 VVIPA---YNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARE---------------------------- 48 (185)
T ss_pred Ceecc---cChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHH----------------------------
Confidence 45666 7765 678899999999999666899999999998865332222
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
|. . ..+.+.
T Consensus 49 -----------------------~~---~---------------------------------------------~~~~~~ 57 (185)
T cd04179 49 -----------------------LA---A---------------------------------------------RVPRVR 57 (185)
T ss_pred -----------------------HH---H---------------------------------------------hCCCeE
Confidence 10 0 013345
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY 235 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~ 235 (648)
++..+++. +|++|+|.+++ .+.+|+++++|+|.. ..|++|.+++..+.. +..++|+.+....
T Consensus 58 ~~~~~~n~-----G~~~a~n~g~~----~a~gd~i~~lD~D~~-~~~~~l~~l~~~~~~---~~~~~v~g~~~~~ 119 (185)
T cd04179 58 VIRLSRNF-----GKGAAVRAGFK----AARGDIVVTMDADLQ-HPPEDIPKLLEKLLE---GGADVVIGSRFVR 119 (185)
T ss_pred EEEccCCC-----CccHHHHHHHH----HhcCCEEEEEeCCCC-CCHHHHHHHHHHHhc---cCCcEEEEEeecC
Confidence 55555544 49999999999 688999999999987 589999999998664 3455666665444
No 61
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.83 E-value=4e-08 Score=114.31 Aligned_cols=162 Identities=18% Similarity=0.246 Sum_probs=106.7
Q ss_pred chHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc---C----hhhhhHHHHHH
Q 006357 175 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY---D----SPADSLAILHE 247 (648)
Q Consensus 175 KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~---D----~~~~~~~~f~~ 247 (648)
|-=.+|.+... ++.+-+||+++|+|.. ++|+++.+++.-|. .||+||-+.. +.. | -+++-.-..-+
T Consensus 426 ~r~~~y~~~~~--L~~~v~~il~vD~dT~-~~P~ai~~lv~~f~--~dp~VggaCG--~I~~~~~~w~v~~Q~FEY~Ish 498 (862)
T KOG2571|consen 426 HRWVMYTAFKA--LMPSVDYILVVDADTR-LDPDALYHLVKVFD--EDPQVGGACG--RILNKGGSWVVAYQNFEYAISH 498 (862)
T ss_pred HHHHHHHHHHH--hcCcceEEEEecCCCc-cCcHHHHHHHHHhc--cCcccceecc--ccccCCCceEEeHHHHHHHHHH
Confidence 33444554443 2466679999999998 69999999999996 3478877776 222 1 12221112223
Q ss_pred hhhhhhhhcCCcccccccce--eehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcCCCCCCC
Q 006357 248 SLGKGIVGIQGPFYAGTGTF--HRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKNTGFS 325 (648)
Q Consensus 248 ~~~~g~dg~~g~~~~Gtg~~--~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~~~~~ 325 (648)
.+++.-+..-|-+.|-.||+ +|-+||.+-.. +..+|..
T Consensus 499 ~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~---------------------~~~y~~~------------------- 538 (862)
T KOG2571|consen 499 NLQKATESVFGCVSCLPGCFSLYRASALMDQFV---------------------EYFYGEK------------------- 538 (862)
T ss_pred HHHHhhhhhceeEEecCchhHHHHHHHHhcchH---------------------Hhhhchh-------------------
Confidence 34555555666666766765 78878853211 1111210
Q ss_pred CCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCcccccCCCCHHHHHHHhhHh
Q 006357 326 SNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPSDLPAAMRQQKRW 405 (648)
Q Consensus 326 ~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~~~Qr~RW 405 (648)
.- +..-|..+ +..||=.+..++..+||+..|+. +..| ..++|+++.+++.||+||
T Consensus 539 -----------~~-----------~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a-~s~a-~t~~Pe~~~efl~QrrRW 593 (862)
T KOG2571|consen 539 -----------FS-----------GPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVA-ASDA-ETEAPESFLEFLNQRRRW 593 (862)
T ss_pred -----------hc-----------Cccccccc-ccchhHHHHHHHHhccceeeeec-cccc-cccCcHhHHHHHHHhhhh
Confidence 00 00013333 38999999999999999999996 4444 899999999999999999
Q ss_pred hch
Q 006357 406 AMG 408 (648)
Q Consensus 406 a~G 408 (648)
..|
T Consensus 594 ~~s 596 (862)
T KOG2571|consen 594 LNS 596 (862)
T ss_pred ccc
Confidence 999
No 62
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.79 E-value=2.6e-07 Score=89.18 Aligned_cols=106 Identities=15% Similarity=0.131 Sum_probs=63.5
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccC
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYD 236 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D 236 (648)
|++.++..+++ .+|++|+|.|++ .+.+++|+.+|+|.. .+|++|.+++..+. + +.++.+.+.......
T Consensus 55 ~~i~~i~~~~n-----~G~~~a~n~g~~----~a~~d~i~~~D~D~~-~~~~~l~~l~~~~~-~-~~~~v~g~~~~~~~~ 122 (181)
T cd04187 55 PRVKVIRLSRN-----FGQQAALLAGLD----HARGDAVITMDADLQ-DPPELIPEMLAKWE-E-GYDVVYGVRKNRKES 122 (181)
T ss_pred CCEEEEEecCC-----CCcHHHHHHHHH----hcCCCEEEEEeCCCC-CCHHHHHHHHHHHh-C-CCcEEEEEecCCcch
Confidence 45566655542 359999999999 688999999999987 68999999999853 2 234433332221111
Q ss_pred hhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhh
Q 006357 237 SPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIY 274 (648)
Q Consensus 237 ~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~ 274 (648)
.........+........+..-+...|+..++||+++.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 160 (181)
T cd04187 123 WLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVVD 160 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcHHHHH
Confidence 11111111111112222233334456777889999984
No 63
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.78 E-value=1.5e-07 Score=97.16 Aligned_cols=35 Identities=17% Similarity=0.024 Sum_probs=29.8
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHH
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQA 213 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~ 213 (648)
++++|+|.|++ .++||+|+.+|+|.+ ..|+.++..
T Consensus 69 G~~~A~N~Gi~----~a~g~~v~~ld~DD~-~~~~~~~~~ 103 (248)
T PRK10063 69 GIYDAMNKGIA----MAQGRFALFLNSGDI-FHQDAANFV 103 (248)
T ss_pred CHHHHHHHHHH----HcCCCEEEEEeCCcc-cCcCHHHHH
Confidence 69999999999 689999999999887 478876543
No 64
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=98.77 E-value=2.3e-07 Score=97.29 Aligned_cols=57 Identities=16% Similarity=0.306 Sum_probs=43.0
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY 235 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~ 235 (648)
.+|.|.|.|++ .+++|+|+++|+|++ +.|+++.+++.+..+-....-+++-.|..|.
T Consensus 75 ~~a~arN~g~~----~A~~d~l~flD~D~i-~~~~~i~~~~~~~~~l~~~~~~~~~~p~~yl 131 (281)
T PF10111_consen 75 SRAKARNIGAK----YARGDYLIFLDADCI-PSPDFIEKLLNHVKKLDKNPNAFLVYPCLYL 131 (281)
T ss_pred CHHHHHHHHHH----HcCCCEEEEEcCCee-eCHHHHHHHHHHHHHHhcCCCceEEEeeeec
Confidence 69999999999 789999999999987 6899999999932210112334555565555
No 65
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.63 E-value=1.2e-06 Score=79.47 Aligned_cols=52 Identities=21% Similarity=0.250 Sum_probs=41.4
Q ss_pred CCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCC
Q 006357 173 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSP 231 (648)
Q Consensus 173 ~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~P 231 (648)
.+|++++|.+++ ..++++++++|+|.. ..|+++.+.+..+.. +++.++|+++
T Consensus 63 ~g~~~~~~~~~~----~~~~d~v~~~d~D~~-~~~~~~~~~~~~~~~--~~~~~~v~~~ 114 (156)
T cd00761 63 QGLAAARNAGLK----AARGEYILFLDADDL-LLPDWLERLVAELLA--DPEADAVGGP 114 (156)
T ss_pred CChHHHHHHHHH----HhcCCEEEEECCCCc-cCccHHHHHHHHHhc--CCCceEEecc
Confidence 469999999999 568999999999987 589999998555542 2567777743
No 66
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.49 E-value=9.4e-06 Score=87.45 Aligned_cols=63 Identities=16% Similarity=0.163 Sum_probs=46.8
Q ss_pred cEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcC
Q 006357 158 HLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQS 230 (648)
Q Consensus 158 ~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~ 230 (648)
++.++..+++ .+|++|+|.|++ .+.|++|+++|||.. .+|+.+.+++..+.+-.++.+++|..
T Consensus 138 ~i~vi~~~~N-----~G~~~A~~~Gi~----~a~gd~I~~~DaD~~-~~~~~l~~l~~~l~~~~~~~~dvV~G 200 (333)
T PTZ00260 138 DIRLLSLLRN-----KGKGGAVRIGML----ASRGKYILMVDADGA-TDIDDFDKLEDIMLKIEQNGLGIVFG 200 (333)
T ss_pred cEEEEEcCCC-----CChHHHHHHHHH----HccCCEEEEEeCCCC-CCHHHHHHHHHHHHHhhccCCceEEe
Confidence 3555554443 259999999999 688999999999987 68999999988886422244555554
No 67
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.32 E-value=5e-06 Score=88.17 Aligned_cols=69 Identities=14% Similarity=0.203 Sum_probs=51.3
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCc-EEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAP-FMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY 235 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~-~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~ 235 (648)
|++.++.-.++-| =||+.|.+++.. ..++. +++.++-|.. ++|++|.+++..+.+ ++.++.|+.....+
T Consensus 56 ~~v~~i~~~~NlG-----~agg~n~g~~~a--~~~~~~~~l~LN~D~~-~~~~~l~~ll~~~~~--~~~~~~~~~~i~~~ 125 (305)
T COG1216 56 PNVRLIENGENLG-----FAGGFNRGIKYA--LAKGDDYVLLLNPDTV-VEPDLLEELLKAAEE--DPAAGVVGPLIRNY 125 (305)
T ss_pred CcEEEEEcCCCcc-----chhhhhHHHHHH--hcCCCcEEEEEcCCee-eChhHHHHHHHHHHh--CCCCeEeeeeEecC
Confidence 5566666666554 588889888853 24433 9999999976 699999999999974 37888888665544
No 68
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=98.18 E-value=9.7e-06 Score=86.36 Aligned_cols=52 Identities=21% Similarity=0.196 Sum_probs=43.6
Q ss_pred CCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcC
Q 006357 173 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQS 230 (648)
Q Consensus 173 ~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~ 230 (648)
.+|++|+|.|+. .+++|+|+.+|||...++|+++.+++.++.+ ++++++|.+
T Consensus 101 ~Gkg~A~~~g~~----~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~--~~~~~~V~g 152 (306)
T PRK13915 101 PGKGEALWRSLA----ATTGDIVVFVDADLINFDPMFVPGLLGPLLT--DPGVHLVKA 152 (306)
T ss_pred CCHHHHHHHHHH----hcCCCEEEEEeCccccCCHHHHHHHHHHHHh--CCCceEEEE
Confidence 369999999999 6899999999999753589999999999862 256777764
No 69
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=98.10 E-value=9.5e-05 Score=79.44 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=37.3
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
+|++|+|+|++ .++||+++.+|||.. .+|+.+.+++..+.+
T Consensus 77 G~~~A~~~G~~----~A~gd~vv~~DaD~q-~~p~~i~~l~~~~~~ 117 (325)
T PRK10714 77 GQHSAIMAGFS----HVTGDLIITLDADLQ-NPPEEIPRLVAKADE 117 (325)
T ss_pred CHHHHHHHHHH----hCCCCEEEEECCCCC-CCHHHHHHHHHHHHh
Confidence 69999999999 689999999999987 689999999999863
No 70
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=97.63 E-value=0.0004 Score=70.34 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=37.1
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
+++.+.|.|+. .+.+++|+++|+|.. .+|+.+.++...+.+
T Consensus 58 g~~~~~n~~~~----~a~~d~vl~lDaD~~-~~~~~~~~l~~~~~~ 98 (229)
T cd02511 58 GFGAQRNFALE----LATNDWVLSLDADER-LTPELADEILALLAT 98 (229)
T ss_pred ChHHHHHHHHH----hCCCCEEEEEeCCcC-cCHHHHHHHHHHHhC
Confidence 58999999999 688999999999988 589999999998864
No 71
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.48 E-value=0.0008 Score=62.55 Aligned_cols=39 Identities=21% Similarity=0.182 Sum_probs=34.4
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhH
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLI 46 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t 46 (648)
.|+| +||+ ..+..++.|++...|+. .+++|+|||++|.|
T Consensus 8 iip~---~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t 46 (291)
T COG0463 8 VIPT---YNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGT 46 (291)
T ss_pred EEec---cchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCCh
Confidence 4566 7777 89999999999999994 88999999999976
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.16 E-value=0.0012 Score=70.54 Aligned_cols=171 Identities=20% Similarity=0.301 Sum_probs=106.4
Q ss_pred CCCcE---EEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEE-cC
Q 006357 155 GLPHL---IYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFV-QS 230 (648)
Q Consensus 155 ~~p~l---~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~V-Q~ 230 (648)
.+|++ +++.-|+ -| -+-|-.|+=-|.+ .+.+|+|++.|.|-++ .||.+.++.--++.+ .+.|+| |+
T Consensus 138 kyp~VdAklf~gG~~-vg--~npKInN~mpgy~----~a~ydlvlisDsgI~m-~pdtildm~t~M~sh--ekmalvtq~ 207 (431)
T KOG2547|consen 138 KYPNVDAKLFFGGEK-VG--LNPKINNMMPGYR----AAKYDLVLISDSGIFM-KPDTILDMATTMMSH--EKMALVTQT 207 (431)
T ss_pred hCCCcceEEEEcccc-cc--cChhhhccCHHHH----HhcCCEEEEecCCeee-cCchHHHHHHhhhcc--cceeeecCC
Confidence 46755 4555555 22 2468888888888 6899999999999885 999999999999853 688888 56
Q ss_pred CccccChhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHH
Q 006357 231 PQYFYDSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFI 310 (648)
Q Consensus 231 PQ~f~D~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~ 310 (648)
|-.+. +-| .|..-...|.||. +-|--|-|- .....-.-|.|...+
T Consensus 208 py~~d-r~G-------------f~atle~~~fgTs--h~r~yl~~n-------------------~~~~~c~tgms~~mr 252 (431)
T KOG2547|consen 208 PYCKD-RQG-------------FDATLEQVYFGTS--HPRIYLSGN-------------------VLGFNCSTGMSSMMR 252 (431)
T ss_pred ceeec-ccc-------------chhhhhheeeccC--CceEEEccc-------------------cccccccccHHHHHH
Confidence 64443 322 1111111333332 112111000 000000013344444
Q ss_pred HHHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccc--cccccchHHHHHHHHhCCcEEEEeCCCCCccc
Q 006357 311 KSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWL--YGSATEDILTGLMIHAKGWKTSYCSPDPHAFL 388 (648)
Q Consensus 311 ~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~--~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~ 388 (648)
|++. ++. ||.. .+.+.||...+=.+..+||++.+.. .++. .
T Consensus 253 K~~l---------------------d~~--------------ggi~~f~~yLaedyFaaksllSRG~ksaist-~pal-Q 295 (431)
T KOG2547|consen 253 KEAL---------------------DEC--------------GGISAFGGYLAEDYFAAKSLLSRGWKSAIST-HPAL-Q 295 (431)
T ss_pred HHHH---------------------HHh--------------ccHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-cchh-h
Confidence 4433 332 2322 2468999999999999999999996 4433 5
Q ss_pred ccCCCCHHHHHHHhhHhhc
Q 006357 389 GCGPSDLPAAMRQQKRWAM 407 (648)
Q Consensus 389 g~aP~tl~~~~~Qr~RWa~ 407 (648)
..+--+...+..|-.||..
T Consensus 296 nSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 296 NSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred hhhhhHHHHHHHHHHHhhh
Confidence 6777888888888899983
No 73
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=96.47 E-value=0.036 Score=59.90 Aligned_cols=50 Identities=18% Similarity=0.265 Sum_probs=39.8
Q ss_pred CCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHH---HHHHHHhhcCCCCcEEEEcC
Q 006357 173 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIV---LQAMCLLLGSKEGDCAFVQS 230 (648)
Q Consensus 173 ~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L---~~~v~~f~d~~~~~va~VQ~ 230 (648)
|+|. |+|.+.. ..++++++++|-|+. +.|||+ .++++.+.+ |++|+.|.+
T Consensus 84 hyk~-aln~vF~----~~~~~~vIILEDDl~-~sPdFf~yf~~~l~~y~~--D~~v~~ISa 136 (334)
T cd02514 84 HYKW-ALTQTFN----LFGYSFVIILEDDLD-IAPDFFSYFQATLPLLEE--DPSLWCISA 136 (334)
T ss_pred HHHH-HHHHHHH----hcCCCEEEEECCCCc-cCHhHHHHHHHHHHHHhc--CCCEEEEEe
Confidence 4444 7888887 468999999999987 799955 788888863 488988874
No 74
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=95.06 E-value=0.17 Score=49.99 Aligned_cols=53 Identities=15% Similarity=0.229 Sum_probs=42.2
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
+++....|.++-| =.-|.-+|+. ++.|+|+++.||| ..-+|.++-+.+..--+
T Consensus 63 d~i~l~pR~~klG-----LgtAy~hgl~----~a~g~fiviMDaD-lsHhPk~ipe~i~lq~~ 115 (238)
T KOG2978|consen 63 DNILLKPRTKKLG-----LGTAYIHGLK----HATGDFIVIMDAD-LSHHPKFIPEFIRLQKE 115 (238)
T ss_pred CcEEEEeccCccc-----chHHHHhhhh----hccCCeEEEEeCc-cCCCchhHHHHHHHhhc
Confidence 6677888888655 4557778888 7999999999999 45789999987776643
No 75
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=94.21 E-value=0.2 Score=52.38 Aligned_cols=41 Identities=20% Similarity=0.020 Sum_probs=32.0
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCC--CCchHHHHHHHHHhh
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMY--ANNPEIVLQAMCLLL 218 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~--~p~p~~L~~~v~~f~ 218 (648)
+|.||..-++. .+.|+++++.|||-- .++-+.|.+++.-..
T Consensus 144 gKGgAvR~g~l----~~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 144 GKGGAVRKGML----SSRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred CCCcceehhhH----hccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 49999998887 689999999999952 256677777766443
No 76
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=93.89 E-value=1.2 Score=53.13 Aligned_cols=75 Identities=23% Similarity=0.370 Sum_probs=53.7
Q ss_pred cccchHHHHHHHHhCCcEEEEeCCCCCcccccCCC-CHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHH
Q 006357 359 SATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPS-DLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYL 437 (648)
Q Consensus 359 svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~-tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~ 437 (648)
.+.||+..|+...++|-++.+++ = .+ .|..-+ .+.+-..=-..=+.|+-|..+|+.--.+. .+|.+-+-+.+.
T Consensus 409 hLsEDIfaG~n~~lRGG~i~h~e-y-~q-cGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrLg---~~ld~~R~LSfy 482 (817)
T PF02364_consen 409 HLSEDIFAGMNATLRGGRIKHCE-Y-IQ-CGKGRDVGFNSILNFETKIASGMGEQMLSREYYRLG---TRLDFFRFLSFY 482 (817)
T ss_pred cccHHHHHHHHHHhcCCceeehh-h-hh-cccccccCchhhhhhHhHhcCCccchhhhHHHHHhh---ccCCHHHHHHHH
Confidence 68999999999999999999994 2 23 254432 34444444566788988888887655555 688888888665
Q ss_pred HH
Q 006357 438 WL 439 (648)
Q Consensus 438 ~~ 439 (648)
.+
T Consensus 483 y~ 484 (817)
T PF02364_consen 483 YA 484 (817)
T ss_pred hc
Confidence 54
No 77
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=88.69 E-value=1.6 Score=44.27 Aligned_cols=48 Identities=13% Similarity=0.185 Sum_probs=38.8
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHh-hcCCCCcEEEE
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLL-LGSKEGDCAFV 228 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f-~d~~~~~va~V 228 (648)
.-|-++|.|++ .++++|++.+.-|..+.+++++.+++..| .| +++|.+
T Consensus 41 s~~~~yN~a~~----~a~~~ylvflHqDv~i~~~~~l~~il~~~~~~---~~~G~i 89 (217)
T PF13712_consen 41 SMAAAYNEAME----KAKAKYLVFLHQDVFIINENWLEDILEIFEED---PNIGMI 89 (217)
T ss_dssp -TTTHHHHHGG----G--SSEEEEEETTEE-SSHHHHHHHHHHHHH----TTEEEE
T ss_pred CHHHHHHHHHH----hCCCCEEEEEeCCeEEcchhHHHHHHHHHhhC---CCccEE
Confidence 47889999999 79999999999999998999999999999 54 567665
No 78
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=82.04 E-value=7.2 Score=33.60 Aligned_cols=27 Identities=22% Similarity=0.279 Sum_probs=19.5
Q ss_pred chHHHHHHHHhcCCCCCCcEEEEecCCCCC
Q 006357 175 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 204 (648)
Q Consensus 175 KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~ 204 (648)
+...+|+.++. ..+++.++.+|||-++
T Consensus 58 ~~~~~~~~~~~---~~~~dWvl~~D~DEfl 84 (97)
T PF13704_consen 58 QRAWRNALIER---AFDADWVLFLDADEFL 84 (97)
T ss_pred HHHHHHHHHHh---CCCCCEEEEEeeeEEE
Confidence 44455665552 3578999999999876
No 79
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=75.61 E-value=8.7 Score=39.21 Aligned_cols=53 Identities=23% Similarity=0.032 Sum_probs=35.6
Q ss_pred cchHHHHHHHHhCCcEEEEeCCCCC----cc------cccCCCCHHHHHHHhhHhhchhHHHH
Q 006357 361 TEDILTGLMIHAKGWKTSYCSPDPH----AF------LGCGPSDLPAAMRQQKRWAMGLLEIL 413 (648)
Q Consensus 361 tED~~t~~~l~~~Gwrs~y~~~~~~----a~------~g~aP~tl~~~~~Qr~RWa~G~~qi~ 413 (648)
.||-+++.||...|.+......... .. ....|+-+.....++.||+...+.-+
T Consensus 138 gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 138 GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 5999999999999998766642211 00 12344556666778888887766554
No 80
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=75.32 E-value=98 Score=39.48 Aligned_cols=82 Identities=21% Similarity=0.232 Sum_probs=48.8
Q ss_pred cccchHHHHHHHHhCCcEEEEeCCCCCcccccCCC-CHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHH
Q 006357 359 SATEDILTGLMIHAKGWKTSYCSPDPHAFLGCGPS-DLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYL 437 (648)
Q Consensus 359 svtED~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~-tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~ 437 (648)
.+.||+.-|+....+|=++.+|+ - .+ .|..-+ .+.+-..=-..=+.|+-|-.+|+.--.++ .++.+.+-+.+.
T Consensus 1173 nlsEDIfAG~n~tlRgG~itH~E-Y-iQ-vGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrLG---~~ldffRmLSfy 1246 (1679)
T KOG0916|consen 1173 NLSEDIFAGFNATLRGGNITHHE-Y-IQ-VGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRLG---TQLDFFRMLSFY 1246 (1679)
T ss_pred ccchHhhhhhhHHhhCCCcccce-e-ee-cccccccCcchhhhhhhhhcCCCcchhhhHHHHHhc---ccccHHHHHHHH
Confidence 68999999999999999998884 1 12 122211 12222222334578888777776443443 567777776544
Q ss_pred HH-HHHHHhH
Q 006357 438 WL-LIWGLRS 446 (648)
Q Consensus 438 ~~-~~~~~~s 446 (648)
.. ..+++.+
T Consensus 1247 ftt~GF~~n~ 1256 (1679)
T KOG0916|consen 1247 FTTVGFYFNN 1256 (1679)
T ss_pred hccccHHHHh
Confidence 43 3444443
No 81
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=57.24 E-value=13 Score=40.07 Aligned_cols=44 Identities=18% Similarity=0.307 Sum_probs=31.6
Q ss_pred HHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCC-CcEEEE
Q 006357 180 NVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKE-GDCAFV 228 (648)
Q Consensus 180 N~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~-~~va~V 228 (648)
|.|+. .+..+||+++|+|++ |.+++-.+...+...... .+.++|
T Consensus 120 NvAr~----~a~T~~v~~~DvD~~-ps~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 120 NVARS----GARTDYVFLLDVDFL-PSPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHH----hcCcceEEEecceee-eCcchHHHHHHHhhhhccCCceEEE
Confidence 44555 688999999999976 888888777766643222 566666
No 82
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=57.08 E-value=64 Score=35.18 Aligned_cols=54 Identities=20% Similarity=0.176 Sum_probs=36.5
Q ss_pred CCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCC
Q 006357 171 PHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSP 231 (648)
Q Consensus 171 ~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~P 231 (648)
-+++|+-.|=-|+-... ....+||-.+|||.|+ |.+..+-+.-|. ...++-|+|
T Consensus 140 VR~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~yA----aGf~ma~sp 193 (381)
T TIGR02460 140 VRSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIYA----AGFLMATSP 193 (381)
T ss_pred eecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHHH----hhhcccCCC
Confidence 34579888877664322 4578999999999997 677777666554 234444554
No 83
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=55.91 E-value=28 Score=38.51 Aligned_cols=57 Identities=12% Similarity=0.116 Sum_probs=41.0
Q ss_pred chHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcC--------------------CCCcEEEEcCCccc
Q 006357 175 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGS--------------------KEGDCAFVQSPQYF 234 (648)
Q Consensus 175 KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~--------------------~~~~va~VQ~PQ~f 234 (648)
....+-+|++. -+.+++++.|||+=.-+++.+++++..+.+. +...+-.+||||.|
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~~~~a~i~~~pv~Dtik~~~~tldR~~l~~~QTPQ~f 158 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALDKADCVLPALPVADTLKRANETVDREGLKLIQTPQLS 158 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhhcCCeEEEEEEeccCcEEeeeEcCcccEEEEECCCCC
Confidence 45678888873 3458999999996444899999988876531 12455668999988
Q ss_pred c
Q 006357 235 Y 235 (648)
Q Consensus 235 ~ 235 (648)
.
T Consensus 159 ~ 159 (378)
T PRK09382 159 R 159 (378)
T ss_pred C
Confidence 5
No 84
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=48.42 E-value=97 Score=32.71 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=27.1
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHH
Q 006357 176 AGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCL 216 (648)
Q Consensus 176 AGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~ 216 (648)
|.|=|.+|-. ++-....+|+-+|+|.+--.|+.+++++.+
T Consensus 128 AraRN~LL~~-aL~p~~swVlWlDaDIv~~P~~lI~dli~~ 167 (269)
T PF03452_consen 128 ARARNFLLSS-ALGPWHSWVLWLDADIVETPPTLIQDLIAH 167 (269)
T ss_pred HHHHHHHHHh-hcCCcccEEEEEecCcccCChHHHHHHHhC
Confidence 4444666653 334588899999999776556677766553
No 85
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=44.18 E-value=1.2e+02 Score=36.09 Aligned_cols=45 Identities=18% Similarity=0.125 Sum_probs=32.7
Q ss_pred CCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhh
Q 006357 171 PHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLL 218 (648)
Q Consensus 171 ~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~ 218 (648)
-+++|+-.|=-|+-... ....+||-.+|||.|+ |.+..+-+..|.
T Consensus 145 vr~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~ya 189 (694)
T PRK14502 145 IRSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHFA 189 (694)
T ss_pred eecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHHH
Confidence 34579888877664332 5778999999999997 567777665554
No 86
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=41.05 E-value=1.2e+02 Score=33.44 Aligned_cols=53 Identities=21% Similarity=0.213 Sum_probs=36.4
Q ss_pred CCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCC
Q 006357 172 HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSP 231 (648)
Q Consensus 172 ~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~P 231 (648)
+++|+-.|=-|+-... ....+||-.+|||.|+ |.+..+-+.-|. ...+.-|+|
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~yA----AGf~ma~sp 194 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIYA----AGFLMAESP 194 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHHH----hhhcccCCC
Confidence 3578888877664322 4578999999999997 677777666664 234445555
No 87
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=35.08 E-value=32 Score=29.17 Aligned_cols=21 Identities=19% Similarity=-0.057 Sum_probs=15.2
Q ss_pred chHHHHHHHHhCCcEEEEeCC
Q 006357 362 EDILTGLMIHAKGWKTSYCSP 382 (648)
Q Consensus 362 ED~~t~~~l~~~Gwrs~y~~~ 382 (648)
||.+++.|+...|.++...+.
T Consensus 47 ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 47 EDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp HHHHHHHHHHHTT---B-SST
T ss_pred cHHHHHHHHHHcCCeEEecCC
Confidence 999999999999999877643
No 88
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=34.50 E-value=68 Score=35.22 Aligned_cols=38 Identities=26% Similarity=0.463 Sum_probs=29.1
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHH
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQA 213 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~ 213 (648)
+.=.+|+.+++..+ +..+|+|++-|+|.+ |+|+.|+.+
T Consensus 162 ~qR~~l~~l~~~~~-~~~dDliivSDvDEI-P~p~~l~~L 199 (356)
T PF04724_consen 162 YQRNALNGLLRLAG-IQDDDLIIVSDVDEI-PSPETLKFL 199 (356)
T ss_pred HHHHHHHHHhhhcC-CCCCCEEEEcCcccc-cCHHHHHHH
Confidence 34456766666666 688999999999987 899888754
No 89
>PHA01631 hypothetical protein
Probab=32.91 E-value=15 Score=35.63 Aligned_cols=72 Identities=14% Similarity=0.128 Sum_probs=41.7
Q ss_pred chHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccChhhhhHHHHHHhhhhhhh
Q 006357 175 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADSLAILHESLGKGIV 254 (648)
Q Consensus 175 KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~~~~~~~~f~~~~~~g~d 254 (648)
=|-.|-..++.-. ..+-|+++++|+|-++|+-+.+ + + ...+.-..-|- ...+.+
T Consensus 56 IAk~Ll~Iln~~s-~i~DDi~~iIDSDV~ipn~~~~-------~-~-~~~v~t~CiPA----------------~~kp~~ 109 (176)
T PHA01631 56 IAKQLLTIVNFAK-NIEDDIIAIIDSDLIIPNLREI-------I-P-NERVFTPCYWL----------------YYDWAN 109 (176)
T ss_pred HHHHHHHHHHhhc-cCCccEEEEeccceEecCcccc-------c-c-CCCccceeeee----------------eecCCC
Confidence 4556666655211 3678899999999999875432 1 0 11221111111 111111
Q ss_pred hcCCcccccccceeehhhh
Q 006357 255 GIQGPFYAGTGTFHRRKVI 273 (648)
Q Consensus 255 g~~g~~~~Gtg~~~RR~aL 273 (648)
-+ .++|.||+.+++|+-+
T Consensus 110 ~v-~~FC~sTNf~~pr~~l 127 (176)
T PHA01631 110 EI-RPFCSGTNYIFRKSLL 127 (176)
T ss_pred cE-EEEEccccEEeeHHHh
Confidence 22 3789999999999876
No 90
>KOG3177 consensus Oligoketide cyclase/lipid transport protein [Lipid transport and metabolism]
Probab=30.75 E-value=39 Score=34.13 Aligned_cols=39 Identities=33% Similarity=0.479 Sum_probs=31.1
Q ss_pred CCChhHHHHHHHHHHHhhhhhhhhhhcccccCCcccccc
Q 006357 41 ACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFL 79 (648)
Q Consensus 41 G~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~ 79 (648)
|.++.+.+++...-.-=+..||+|||-.|..+-|..+|.
T Consensus 77 gysp~~my~vVS~V~~Y~~FVPwC~kS~V~~~~P~~~~k 115 (227)
T KOG3177|consen 77 GYSPSEMYSVVSNVSEYHEFVPWCKKSDVTSRRPSGPLK 115 (227)
T ss_pred CCCHHHHHHHHHhHHHhhccccceeccceeecCCCCCce
Confidence 667888887777766667899999999998888865554
No 91
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=26.67 E-value=1.6e+02 Score=32.72 Aligned_cols=37 Identities=8% Similarity=0.127 Sum_probs=26.2
Q ss_pred CCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEE
Q 006357 189 MTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFV 228 (648)
Q Consensus 189 ~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~V 228 (648)
.+.|+.++.+||-|-+ +-++|--.+.... +|..|.-|
T Consensus 238 ~atGeV~ifLDAHCEV-ntNWlpPLlAPI~--rdRtvmTV 274 (603)
T KOG3737|consen 238 KATGEVLIFLDAHCEV-NTNWLPPLLAPIS--RDRTVMTV 274 (603)
T ss_pred hccccEEEEEecceee-ecccccccccccc--cCceEEEE
Confidence 4789999999999987 6778766665553 23455444
No 92
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=24.97 E-value=72 Score=35.45 Aligned_cols=39 Identities=18% Similarity=-0.001 Sum_probs=32.8
Q ss_pred CCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHH
Q 006357 9 ELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIF 47 (648)
Q Consensus 9 ~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~ 47 (648)
-||--.+...||.|+|.-.=+.--.+++++||++.|.+.
T Consensus 133 HNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dped 171 (559)
T KOG3738|consen 133 HNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPED 171 (559)
T ss_pred ccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChHH
Confidence 578888999999999987655556799999999999863
No 93
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=24.91 E-value=2.5e+02 Score=26.63 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=33.2
Q ss_pred CCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHh
Q 006357 173 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLL 217 (648)
Q Consensus 173 ~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f 217 (648)
.+-.+.+..+++ ..+.+.+++++|||-.-+++.+++++..+
T Consensus 69 ~G~~~si~~~l~----~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 69 KGPLAGILAALR----AAPADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCHHHHHHHHH----hcCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 356788999998 34578999999998444899999988877
No 94
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=24.87 E-value=2e+02 Score=29.83 Aligned_cols=28 Identities=18% Similarity=0.196 Sum_probs=22.1
Q ss_pred CCCcEEEEecCCCCCCchHHHHHHHHHhh
Q 006357 190 TNAPFMLNVDCDMYANNPEIVLQAMCLLL 218 (648)
Q Consensus 190 t~~~~i~vlDaD~~~p~p~~L~~~v~~f~ 218 (648)
++.+.++.+|-|.|+ +.+-|++.+.-+-
T Consensus 85 ~~~~Wf~~~DDDtyv-~~~~L~~~L~~~~ 112 (252)
T PF02434_consen 85 SDKDWFCFADDDTYV-NVENLRRLLSKYD 112 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS-
T ss_pred CCceEEEEEeCCcee-cHHHHHHHHhhCC
Confidence 678999999999997 7888888877763
No 95
>KOG3093 consensus 5-formyltetrahydrofolate cyclo-ligase [Coenzyme transport and metabolism]
Probab=24.58 E-value=1.3e+02 Score=30.00 Aligned_cols=51 Identities=22% Similarity=0.230 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhh-hhhhhhhh
Q 006357 15 MTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAK-LWVPFCKK 66 (648)
Q Consensus 15 ~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~-~W~pfc~k 66 (648)
.+-.+|+++-...=- -+++||+|=|++.-.|=+-+.|+++.-| ..+|-|.+
T Consensus 33 ai~~kV~e~~~fk~s-krvs~YmSm~~~Ev~T~~Ii~~~fq~gK~vFiP~~~~ 84 (200)
T KOG3093|consen 33 AISKKVLELPWFKNS-KRVSIYMSMDKGEVDTGEIIKEAFQDGKEVFIPRCTH 84 (200)
T ss_pred HHHHHHHhhHHHHhc-CceEEEEecCcccccHHHHHHHHHhcCCeEEeeeeec
Confidence 344556655444433 3899999999998889899999998877 77777753
No 96
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=22.93 E-value=93 Score=36.38 Aligned_cols=51 Identities=12% Similarity=0.045 Sum_probs=41.2
Q ss_pred EEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 159 LIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 159 l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
+.++..++|.| +-.|-+.|-+ ++.||.+..+||-+-+ +..+|.-.+.....
T Consensus 203 v~i~r~~~R~G-----LIrARl~GA~----~A~geVL~FLDsHcE~-n~gWLePLL~~I~~ 253 (578)
T KOG3736|consen 203 VRILRTKKREG-----LIRARLLGAS----MATGEVLTFLDSHCEV-NVGWLEPLLARIAE 253 (578)
T ss_pred eeEEeecchhh-----hHHHHhhhhh----hhhchheeeeecceeE-ecCcchHHHHHhhh
Confidence 56667777765 7777777777 7999999999999997 78999888877764
No 97
>PF02012 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Members of this entry contain multiple BNR (bacterial neuraminidase repeat) repeats or Asp-boxes. The repeats are short, however the repeats are never found closer than 40 residues together suggesting that the repeat is structurally longer. These repeats are found in a variety of non-homologous proteins, including bacterial ribonucleases, sulphite oxidases, reelin, netrins, sialidases, neuraminidases, some lipoprotein receptors, and a variety of glycosyl hydrolases [].; PDB: 2JKB_A 2VW0_A 2VW2_A 2VW1_A 2CN2_D 2CN3_B 2VK7_B 2VK5_A 2VK6_A 2BF6_A ....
Probab=22.34 E-value=62 Score=17.98 Aligned_cols=9 Identities=33% Similarity=0.471 Sum_probs=6.8
Q ss_pred EEecCCCCh
Q 006357 36 YISDDACSP 44 (648)
Q Consensus 36 yv~DDG~s~ 44 (648)
|.|+|||..
T Consensus 1 ~~S~D~G~T 9 (12)
T PF02012_consen 1 YYSTDGGKT 9 (12)
T ss_dssp EEESSTTSS
T ss_pred CEeCCCccc
Confidence 678998853
No 98
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=22.00 E-value=2.5e+02 Score=27.19 Aligned_cols=42 Identities=14% Similarity=0.102 Sum_probs=32.9
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
+-.+++..+++ ..+.+.+++++||+-.-+++.+++++..+.+
T Consensus 75 g~~~~i~~~l~----~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 116 (193)
T PRK00317 75 GPLAGILAGLK----QARTEWVLVVPCDTPFIPPDLVARLAQAAGK 116 (193)
T ss_pred CCHHHHHHHHH----hcCCCeEEEEcCCcCCCCHHHHHHHHHhhhc
Confidence 34567888887 3567999999999944589999999887753
No 99
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=20.63 E-value=2.6e+02 Score=25.86 Aligned_cols=54 Identities=15% Similarity=0.100 Sum_probs=39.5
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCC
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSP 231 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~P 231 (648)
+=+.+|=.+++. ..+.+.++++-||+...+++.+++.+..+.+. ...++++.++
T Consensus 71 G~~~sl~~a~~~---~~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~~-~~~i~~~~~~ 124 (160)
T PF12804_consen 71 GPLASLLAALSQ---LPSSEPVLVLPCDQPFLSPELLRRLLEALEKS-PADIVVPVFR 124 (160)
T ss_dssp SHHHHHHHHHHT---STTSSEEEEEETTETTS-HHHHHHHHHHHHHT-TTSEEEEEET
T ss_pred ChHHHHHHHHHh---cccCCCcEEEeCCccccCHHHHHHHHHHHhcc-CCcEEEEEEC
Confidence 466777777773 22889999999998435899999999998632 2677777654
No 100
>PF10443 RNA12: RNA12 protein; InterPro: IPR018850 Mitochondrial escape protein 2 (also known as RNA12) plays a role in maintaining the mitochondrial genome and in controlling mtDNA escape [, ]. It is also involved in the regulation of mtDNA nucleotide structure and number []. Additionally, this protein have a dispensable role in the early maturation of pre-rRNA [].
Probab=20.02 E-value=2e+02 Score=32.45 Aligned_cols=78 Identities=14% Similarity=0.242 Sum_probs=50.8
Q ss_pred cEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCC---chHHHHHH---HHHhhcCCCCcEEEEcCC
Q 006357 158 HLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYAN---NPEIVLQA---MCLLLGSKEGDCAFVQSP 231 (648)
Q Consensus 158 ~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p---~p~~L~~~---v~~f~d~~~~~va~VQ~P 231 (648)
.++.|+-++..| ++.=-|...|+ +.+.++++|||.++- +..++.++ ++|| |..
T Consensus 18 TFIvV~GPrGSG----K~elV~d~~L~------~r~~vL~IDC~~i~~ar~D~~~I~~lA~qvGY~-----PvF------ 76 (431)
T PF10443_consen 18 TFIVVQGPRGSG----KRELVMDHVLK------DRKNVLVIDCDQIVKARGDAAFIKNLASQVGYF-----PVF------ 76 (431)
T ss_pred eEEEEECCCCCC----ccHHHHHHHHh------CCCCEEEEEChHhhhccChHHHHHHHHHhcCCC-----cch------
Confidence 356666666444 44445588876 455699999998752 34444443 3444 222
Q ss_pred ccccChhhhhHHHHHHhhhhhhhhcCCccc
Q 006357 232 QYFYDSPADSLAILHESLGKGIVGIQGPFY 261 (648)
Q Consensus 232 Q~f~D~~~~~~~~f~~~~~~g~dg~~g~~~ 261 (648)
.+-|....|-|...+|+.|..+.|.
T Consensus 77 -----sw~nSiss~IDLa~qGltGqKaGfS 101 (431)
T PF10443_consen 77 -----SWMNSISSFIDLAVQGLTGQKAGFS 101 (431)
T ss_pred -----HHHHHHHHHHHHHHhhccccccCCC
Confidence 4678888899999999888776543
Done!