Query 006357
Match_columns 648
No_of_seqs 326 out of 1570
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 22:51:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006357.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006357hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 1.7E-44 5.6E-49 425.0 39.9 426 1-624 144-583 (802)
2 1xhb_A Polypeptide N-acetylgal 99.5 6.5E-14 2.2E-18 154.5 14.5 113 2-228 34-148 (472)
3 2z86_A Chondroitin synthase; G 99.5 1.1E-13 3.9E-18 157.8 16.1 68 157-235 148-215 (625)
4 1qg8_A Protein (spore coat pol 99.5 8.8E-15 3E-19 146.9 5.0 211 2-408 6-235 (255)
5 3bcv_A Putative glycosyltransf 99.5 3.6E-13 1.2E-17 133.6 15.1 102 2-219 10-111 (240)
6 2d7i_A Polypeptide N-acetylgal 99.4 2.4E-13 8.1E-18 154.3 10.0 108 1-219 116-223 (570)
7 2z86_A Chondroitin synthase; G 99.4 3.8E-13 1.3E-17 153.4 9.1 216 2-413 380-598 (625)
8 2ffu_A Ppgalnact-2, polypeptid 99.4 5.4E-13 1.8E-17 148.6 9.0 104 1-219 70-173 (501)
9 3ckj_A Putative uncharacterize 99.1 7.9E-10 2.7E-14 116.5 12.9 53 173-231 117-169 (329)
10 3l7i_A Teichoic acid biosynthe 99.0 3.5E-11 1.2E-15 140.1 0.0 103 2-218 7-109 (729)
11 4fix_A UDP-galactofuranosyl tr 99.0 6E-10 2E-14 128.4 8.7 65 157-230 240-304 (657)
12 3f1y_A Mannosyl-3-phosphoglyce 98.5 1.1E-06 3.9E-11 94.9 13.9 51 174-230 166-216 (387)
13 2fy7_A Beta-1,4-galactosyltran 98.2 4.9E-07 1.7E-11 93.9 2.5 60 354-413 191-263 (287)
14 2nxv_A ATP synthase subunits r 98.0 2.2E-05 7.5E-10 79.1 10.6 51 174-229 61-113 (249)
15 2bo4_A Mannosylglycerate synth 97.4 0.00074 2.5E-08 73.1 12.6 42 173-218 74-119 (397)
16 1fo8_A Alpha-1,3-mannosyl-glyc 96.5 0.011 3.6E-07 62.8 10.5 40 2-46 7-46 (343)
17 2zu9_A Mannosyl-3-phosphoglyce 94.1 0.2 6.8E-06 53.9 10.5 42 174-218 144-185 (394)
18 2wvl_A Mannosyl-3-phosphoglyce 92.3 0.28 9.6E-06 52.0 7.8 42 173-217 142-183 (391)
19 3q80_A 2-C-methyl-D-erythritol 44.4 38 0.0013 33.0 6.7 45 175-219 83-127 (231)
20 3lw6_A FI08434P, beta-4-galact 37.1 47 0.0016 33.8 6.1 53 361-413 185-250 (287)
21 3f1c_A Putative 2-C-methyl-D-e 34.9 43 0.0015 32.5 5.4 46 174-219 84-132 (246)
22 3d5n_A Q97W15_sulso; NESG, SSR 25.1 1.3E+02 0.0044 27.9 6.7 41 174-217 72-112 (197)
23 2j0a_A Beta-1,3-N-acetylglucos 23.5 2.1E+02 0.0071 28.6 8.2 27 190-217 92-118 (280)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.7e-44 Score=425.01 Aligned_cols=426 Identities=20% Similarity=0.291 Sum_probs=314.1
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|.|+| |||++.++.+|+.|++++|||.++++|+|+|||++|.|.+.
T Consensus 144 ViIPt---yNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------------------- 189 (802)
T 4hg6_A 144 ILVPS---YNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------------------- 189 (802)
T ss_dssp EEEEC---TTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC-------------------------------
T ss_pred EEEEE---CCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc-------------------------------
Confidence 46777 99999999999999999999999999999999999977321
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
.+|+..++... .+++++...++ .++.
T Consensus 190 --------~d~~i~~~~~~---~~~~l~~~~~~-------------------------------------------~~v~ 215 (802)
T 4hg6_A 190 --------PDPELAQKAQE---RRRELQQLCRE-------------------------------------------LGVV 215 (802)
T ss_dssp --------SSHHHHHHHHH---HHHHHHHHHHH-------------------------------------------HTCE
T ss_pred --------CCHHHHHHHHh---hhHHHHHHHHh-------------------------------------------cCcE
Confidence 11222222222 22222221111 3467
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc--Chh
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY--DSP 238 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~--D~~ 238 (648)
|+.|++ ++++|+||+|.|++ .+++|||+++|||++ ++|++|++++.+|.+ ++++++||+|+.+. |+.
T Consensus 216 ~i~~~~----~~~GKa~alN~gl~----~a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~--dp~v~~V~~~~~~~~~~~~ 284 (802)
T 4hg6_A 216 YSTRER----NEHAKAGNMSAALE----RLKGELVVVFDADHV-PSRDFLARTVGYFVE--DPDLFLVQTPHFFINPDPI 284 (802)
T ss_dssp EEECSS----CCSHHHHHHHHHHH----HCCCSEEEECCTTEE-ECTTHHHHHHHHHHH--SSSCCEEECCCCBSSCCHH
T ss_pred EEEecC----CCCcchHHHHHHHH----hcCCCEEEEECCCCC-cChHHHHHHHHHHhc--CCCeEEEeccEEEeCCchH
Confidence 888887 45689999999999 689999999999998 589999999999963 37899999999998 432
Q ss_pred h----------hhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHH
Q 006357 239 A----------DSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKE 308 (648)
Q Consensus 239 ~----------~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~ 308 (648)
. ++...|++..+.+.+.+++++++|+++++||+++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~---------------------------------- 330 (802)
T 4hg6_A 285 QRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD---------------------------------- 330 (802)
T ss_dssp HHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH----------------------------------
T ss_pred hhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHH----------------------------------
Confidence 2 34578899999999999999999999999999882
Q ss_pred HHHHHHHhhcCCCCCCCCCchhHHHHhhhhcccccccccccccccccccccccchHHHHHHHHhCCcEEEEeCCCCCccc
Q 006357 309 FIKSAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYGSATEDILTGLMIHAKGWKTSYCSPDPHAFL 388 (648)
Q Consensus 309 ~~~s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~a~~ 388 (648)
++ |||+.++++||.+++++++++||++.|++ ++. ++
T Consensus 331 ----------------------------~v--------------Ggf~~~~~~ED~~l~~rl~~~G~ri~~~~-~~~-~~ 366 (802)
T 4hg6_A 331 ----------------------------EA--------------GGFAGETITEDAETALEIHSRGWKSLYID-RAM-IA 366 (802)
T ss_dssp ----------------------------HH--------------TTCCCSSSSHHHHHHHHHHTTTCCEEECC-CCC-EE
T ss_pred ----------------------------Hc--------------CCcCCCCcchHHHHHHHHHHcCCeEEEec-CCE-EE
Confidence 34 48999999999999999999999999995 554 58
Q ss_pred ccCCCCHHHHHHHhhHhhchhHHHHHhhcchhhhhccCCCCHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCccc
Q 006357 389 GCGPSDLPAAMRQQKRWAMGLLEILLSEHSPILATLTGKLQFRQCLGYLWLLIWGLRSIPELCYVALPAYCIITNTSFLP 468 (648)
Q Consensus 389 g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~~l~~~qrl~y~~~~~~~~~s~~~l~~~~~P~l~l~~g~~~~p 468 (648)
+++|+|+.++++||.||++|.+|+++ +++|++. +++++.||++|+..+.+++.+++.++++++|++++++++.+++
T Consensus 367 ~~~p~t~~~~~~Qr~RW~~G~~q~l~-~~~pl~~---~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~ 442 (802)
T 4hg6_A 367 GLQPETFASFIQQRGRWATGMMQMLL-LKNPLFR---RGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFV 442 (802)
T ss_dssp ECCCCSHHHHHHHHHHHHHHHHHHHH-HSCTTSC---SSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred ecCCCCHHHHHHHHHHHHccHHHHHH-HhCcccc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhh
Confidence 99999999999999999999999998 5678775 7899999999999999999888889999999999999998887
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHhcCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEcccCCCCCC
Q 006357 469 KVQEPGICIAVAIFVIYKLYTLSEYIHGGFPIYSWFVNNSMLRIVATSAWLFGFGSTVLKLLGLSETVFEITKKVHQSSD 548 (648)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~G~~~~~ww~~~r~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~ 548 (648)
.....++.++++.++...+ +.....|.....||. +.+.. ......+.++ +...+++++.+|+||+|+...++
T Consensus 443 ~~~~~~~~~~lp~~l~~~~---~~~~~~~~~r~~~~~-~l~~~-~~~~~~~~a~---l~~l~~~~~~~f~VT~Kg~~~~~ 514 (802)
T 4hg6_A 443 ATFEEVLAYMPGYLAVSFL---VQNALFARQRWPLVS-EVYEV-AQAPYLARAI---VTTLLRPRSARFAVTAKDETLSE 514 (802)
T ss_dssp CCHHHHHHHHHHHHHHHHH---HHHHHHTTTSCTTHH-HHHHH-HHHHHHHHHH---HHHHHSTTCCCCCCCCCCCCCSS
T ss_pred cCHHHHHHHHHHHHHHHHH---HHHHHhcCcHHHHHH-HHHHH-HHHHHHHHHH---HHHHhCCCCCcceECCCCccccc
Confidence 6444443333332221111 111112211112332 22111 1111122333 33345678899999999987542
Q ss_pred CCCCCccccccCCcchHHHHHHHHHHHHHHHHHHhhcccCCC-CchhHHHHHHHHHHHHHHHHHHHHHh-ccCCCCCc
Q 006357 549 GGKDGKELLFDESPFFVPGTTILLVHLAALATGLLGMQPQGG-QGPGLGEYFCSVYVVLCFSPFLLGLF-RKGKNGIP 624 (648)
Q Consensus 549 ~~~~~~~~~f~~s~l~~P~~~l~~l~l~al~~g~~~~~~~~~-~~~~~~~l~~~~~~v~~l~p~~~al~-~k~~~~~P 624 (648)
. + + +.+++|++++++++++++++|+++...... .....++++|++|+++.+.+.+...+ ++++++.|
T Consensus 515 ~------~-~--~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~ 583 (802)
T 4hg6_A 515 N------Y-I--SPIYRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAP 583 (802)
T ss_dssp C------C-B--CTTCHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCC
T ss_pred c------c-h--hhHHHHHHHHHHHHHHHHHHHHHHHhccCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 1 1 2 367799999999999999999998764332 23345667777777777776666666 44443434
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.52 E-value=6.5e-14 Score=154.51 Aligned_cols=113 Identities=13% Similarity=0.021 Sum_probs=87.9
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChh-HHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPL-IFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~-t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
.|+| |+|+...+.+|+.|+++..||..+++|+|+|||+++. |.+.+.+
T Consensus 34 IIp~---yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~---------------------------- 82 (472)
T 1xhb_A 34 VIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES---------------------------- 82 (472)
T ss_dssp EEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH----------------------------
T ss_pred EEEe---CCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHH----------------------------
Confidence 4666 8999899999999999999997678999999999983 4222221
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCC-cE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLP-HL 159 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p-~l 159 (648)
|. . .+| ++
T Consensus 83 -----------------------~~---~---------------------------------------------~~~~~v 91 (472)
T 1xhb_A 83 -----------------------YV---K---------------------------------------------KLKVPV 91 (472)
T ss_dssp -----------------------HH---H---------------------------------------------SSSSCE
T ss_pred -----------------------HH---H---------------------------------------------HCCCcE
Confidence 10 0 124 57
Q ss_pred EEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEE
Q 006357 160 IYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFV 228 (648)
Q Consensus 160 ~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~V 228 (648)
.++..+++. ++++|+|.|++ .++||+|+++|+|.. ++|++|.+++..+.+ ++.++.+
T Consensus 92 ~vi~~~~n~-----G~~~a~N~g~~----~A~gd~i~flD~D~~-~~p~~L~~ll~~~~~--~~~~~v~ 148 (472)
T 1xhb_A 92 HVIRMEQRS-----GLIRARLKGAA----VSRGQVITFLDAHCE-CTAGWLEPLLARIKH--DRRTVVC 148 (472)
T ss_dssp EEEECSSCC-----CHHHHHHHHHH----HCCSSEEEEEESSEE-ECTTCHHHHHHHHHH--CTTEEEE
T ss_pred EEEECCCCC-----ChHHHHHHHHH----hccCCeEEEECCCeE-eCccHHHHHHHHHHh--CCCEEEE
Confidence 788777644 49999999999 688999999999988 589999999999974 2445444
No 3
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.51 E-value=1.1e-13 Score=157.77 Aligned_cols=68 Identities=22% Similarity=0.301 Sum_probs=55.6
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcccc
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFY 235 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~ 235 (648)
+++.|+.+++ +.++|++|+|.|++ .+++++|+++|+|+. ++|++|.+++.+|.+ ++.+++|+..+.+.
T Consensus 148 ~~i~~i~~~~----~~~g~~~a~N~g~~----~a~g~~v~~lD~D~~-~~~~~l~~~~~~~~~--~~~~~~~g~~~~~~ 215 (625)
T 2z86_A 148 LNIKYVRQKD----YGYQLCAVRNLGLR----AAKYNYVAILDCDMA-PNPLWVQSYMELLAV--DDNVALIGPRKYID 215 (625)
T ss_dssp SCEEEEEECC----CSCCHHHHHHHHHH----HCCSSEEEEECTTEE-ECTTHHHHHHHHHHH--CTTEEEECCEEEEC
T ss_pred CCeEEEEeCC----CCcchhHHHHHHHH----hCCcCEEEEECCCCC-CCHHHHHHHHHHHhc--CCceEEEEeeeecc
Confidence 4577777765 22479999999999 689999999999988 589999999999974 36788888766554
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.50 E-value=8.8e-15 Score=146.87 Aligned_cols=211 Identities=10% Similarity=0.055 Sum_probs=131.3
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCC
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGE 81 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~ 81 (648)
.|+| ||++ ..+.+|+.|+++.+|| .++++|+|||+++.|.+.+.+
T Consensus 6 iIp~---yn~~-~~l~~~l~Sl~~q~~~--~~eiivvDd~S~d~t~~~~~~----------------------------- 50 (255)
T 1qg8_A 6 IMTS---YNKS-DYVAKSISSILSQTFS--DFELFIMDDNSNEETLNVIRP----------------------------- 50 (255)
T ss_dssp EEEE---SSCT-TTHHHHHHHHHTCSCC--CEEEEEEECSCCHHHHHHHGG-----------------------------
T ss_pred EEEc---CCCH-HHHHHHHHHHHhccCC--ceEEEEEECCCCchHHHHHHH-----------------------------
Confidence 4566 7776 7899999999999999 899999999999966322211
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEE
Q 006357 82 SAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIY 161 (648)
Q Consensus 82 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Y 161 (648)
|. ..+++.|
T Consensus 51 ----------------------~~-------------------------------------------------~~~~i~~ 59 (255)
T 1qg8_A 51 ----------------------FL-------------------------------------------------NDNRVRF 59 (255)
T ss_dssp ----------------------GG-------------------------------------------------GSTTEEE
T ss_pred ----------------------Hh-------------------------------------------------hcCCEEE
Confidence 00 0145677
Q ss_pred EEcc--------CCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCcc
Q 006357 162 ISRE--------KRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQY 233 (648)
Q Consensus 162 v~Re--------kr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~ 233 (648)
+..+ ++ .++++|+|.|++ .++|+||+.+|+|.+ ..|++|.+++..|.+ ++++++|.+...
T Consensus 60 i~~~~~~~~~~~~n-----~G~~~a~N~gi~----~a~g~~i~~lD~Dd~-~~~~~l~~~~~~~~~--~~~~~~v~~~~~ 127 (255)
T 1qg8_A 60 YQSDISGVKERTEK-----TRYAALINQAIE----MAEGEYITYATDDNI-YMPDRLLKMVRELDT--HPEKAVIYSASK 127 (255)
T ss_dssp EECCCCSHHHHHSS-----CHHHHHHHHHHH----HCCCSEEEEEETTEE-ECTTHHHHHHHHHHH--CTTCCEEEEEEE
T ss_pred Eecccccccccccc-----cCHHHHHHHHHH----HcCCCEEEEeCCCCc-cChHHHHHHHHHHHh--CCCceEEEeceE
Confidence 7665 32 359999999999 689999999999998 489999999999974 367888887655
Q ss_pred cc--ChhhhhHHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHH
Q 006357 234 FY--DSPADSLAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIK 311 (648)
Q Consensus 234 f~--D~~~~~~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~ 311 (648)
.. |.-+.....++... ............|++.++||+++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~rr~~~~------------------------------------- 169 (255)
T 1qg8_A 128 TYHLNENRDIVKETVRPA-AQVTWNAPCAIDHCSVMHRYSVLE------------------------------------- 169 (255)
T ss_dssp EEEEC---CEEEEEEECC-CSCBSCCTTTSCGGGEEEETHHHH-------------------------------------
T ss_pred EEEeCCCCcchhhccCch-HHHHHhhcCCCccceEEEEHHHHH-------------------------------------
Confidence 43 32211100000000 000112223345677778887762
Q ss_pred HHHHhhcCCCCCCCCCchhHHHHhhhhccccccccccccccccc-------ccccccchHHHHHHHHhCCcEEEEeCCCC
Q 006357 312 SAVDALEGKNTGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGW-------LYGSATEDILTGLMIHAKGWKTSYCSPDP 384 (648)
Q Consensus 312 s~~~~~~g~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~-------~~~svtED~~t~~~l~~~Gwrs~y~~~~~ 384 (648)
++| +|| ......||.++.+|+..+| ++.|++ ++
T Consensus 170 -------------------------~~g-------------~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~-~~ 209 (255)
T 1qg8_A 170 -------------------------KVK-------------EKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLD-EE 209 (255)
T ss_dssp -------------------------HHH-------------HHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEE-EE
T ss_pred -------------------------hhc-------------ccccccccCCcccchHHHHHHHHHHHHhC-CEEEec-Cc
Confidence 231 133 1234689999999999987 688885 55
Q ss_pred CcccccCCCCHHHHH--HHhhHhhch
Q 006357 385 HAFLGCGPSDLPAAM--RQQKRWAMG 408 (648)
Q Consensus 385 ~a~~g~aP~tl~~~~--~Qr~RWa~G 408 (648)
...+-..+.+..... +|+.||.+.
T Consensus 210 ~~~~r~~~~s~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 210 LDLNYITDQSIHFQLFELEKNEFVRN 235 (255)
T ss_dssp EEEEEEC--------------CTGGG
T ss_pred EEEEEEcCCccchhHHHHHHHHHHHh
Confidence 555666677776655 555666544
No 5
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.48 E-value=3.6e-13 Score=133.65 Aligned_cols=102 Identities=14% Similarity=0.078 Sum_probs=80.9
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCC
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGE 81 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~ 81 (648)
.|+| |+++ ..+.+++.|+++..|| .++|+|+|||+++.|.+.+.+.
T Consensus 10 iIp~---yn~~-~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~t~~~~~~~---------------------------- 55 (240)
T 3bcv_A 10 IVPI---YNVE-KYLDQCVQALLAQTLS--DIEIILIDDESPDNCPKICDDY---------------------------- 55 (240)
T ss_dssp EEEE---SSCT-TTHHHHHHHHHTCSSS--SEEEEEEECCCSSSHHHHHHHH----------------------------
T ss_pred EEec---CCCH-HHHHHHHHHHHhCcCC--CeEEEEEECCCCcCHHHHHHHH----------------------------
Confidence 4566 7776 7889999999999999 7999999999999764333221
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEE
Q 006357 82 SAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIY 161 (648)
Q Consensus 82 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Y 161 (648)
. . ..|++.+
T Consensus 56 -----------------------~---~---------------------------------------------~~~~i~~ 64 (240)
T 3bcv_A 56 -----------------------A---A---------------------------------------------QYPNIKV 64 (240)
T ss_dssp -----------------------H---H---------------------------------------------HCSSEEE
T ss_pred -----------------------H---h---------------------------------------------hCCCEEE
Confidence 0 0 0155677
Q ss_pred EEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 162 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 162 v~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
++.++ .++++|.|.|++ .++|+||+.+|+|.+ .+|++|.+++..+.+
T Consensus 65 i~~~n------~G~~~a~N~g~~----~a~g~~i~~lD~Dd~-~~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 65 IHKKN------AGLGMACNSGLD----VATGEYVAFCDSDDY-VDSDMYMTMYNVAQK 111 (240)
T ss_dssp EECCC------CCHHHHHHHHHH----HCCSSEEEECCTTCC-CCTTHHHHHHHHHHH
T ss_pred EECCC------CChHHHHHHHHH----HcCCCEEEEECCCCc-CCHHHHHHHHHHHHh
Confidence 76432 369999999999 689999999999988 589999999999975
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.42 E-value=2.4e-13 Score=154.25 Aligned_cols=108 Identities=15% Similarity=0.077 Sum_probs=85.6
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|.|+| |+|+...+..||.|+++..||...++|+|+|||+++.|+.++.+
T Consensus 116 VIIp~---yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~---------------------------- 164 (570)
T 2d7i_A 116 IIIPF---HNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLE---------------------------- 164 (570)
T ss_dssp EEEEE---SSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHH----------------------------
T ss_pred EEEEE---CCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHH----------------------------
Confidence 34666 89988999999999999999965679999999999976222211
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
+|. ...|++.
T Consensus 165 ----------------------~~~------------------------------------------------~~~~~v~ 174 (570)
T 2d7i_A 165 ----------------------DYM------------------------------------------------ALFPSVR 174 (570)
T ss_dssp ----------------------HHH------------------------------------------------TTSTTEE
T ss_pred ----------------------HHH------------------------------------------------HhCCeEE
Confidence 110 0125677
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
++..+++. ++++|+|.|++ .+++|||+++|+|..+ +|++|.+++..+.+
T Consensus 175 vi~~~~n~-----G~~~A~N~G~~----~A~gd~i~fLD~D~~~-~p~~L~~ll~~l~~ 223 (570)
T 2d7i_A 175 ILRTKKRE-----GLIRTRMLGAS----VATGDVITFLDSHCEA-NVNWLPPLLDRIAR 223 (570)
T ss_dssp EEECSSCC-----CHHHHHHHHHH----HCCSSEEEECCSSEEE-CTTCSHHHHHHHHH
T ss_pred EEECCCCC-----CHHHHHHHHHH----hcCCCEEEEEcCCccc-cccHHHHHHHHHHh
Confidence 77776644 49999999999 6899999999999884 99999999999975
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.39 E-value=3.8e-13 Score=153.41 Aligned_cols=216 Identities=15% Similarity=0.053 Sum_probs=142.4
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCC
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGE 81 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~ 81 (648)
.|+| |||+ ..+.+++.|+++.+|| .++++|+|||+++.|.+.+.+..+
T Consensus 380 ii~~---yn~~-~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~t~~~~~~~~~-------------------------- 427 (625)
T 2z86_A 380 YIPA---YNCS-KYIVRCVESALNQTIT--DLEVCICDDGSTDDTLRILQEHYA-------------------------- 427 (625)
T ss_dssp EEEE---SSCT-TTHHHHHHHHHSSSCC--SEEEEEEEESCSSSHHHHHHHHHT--------------------------
T ss_pred EEeC---CCCH-HHHHHHHHHHHhCcCC--CeEEEEEECcCChhHHHHHHHHHh--------------------------
Confidence 3555 7774 7889999999999998 799999999999977433322100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEE
Q 006357 82 SAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIY 161 (648)
Q Consensus 82 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Y 161 (648)
..|++.+
T Consensus 428 -------------------------------------------------------------------------~~~~i~~ 434 (625)
T 2z86_A 428 -------------------------------------------------------------------------NHPRVRF 434 (625)
T ss_dssp -------------------------------------------------------------------------TCTTEEE
T ss_pred -------------------------------------------------------------------------hCCcEEE
Confidence 1255677
Q ss_pred EEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCCccccChhhhh
Q 006357 162 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSPQYFYDSPADS 241 (648)
Q Consensus 162 v~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~PQ~f~D~~~~~ 241 (648)
++.++ .++++|+|.|++ .++|+||+.+|+|.+ .+|++|.+++..|.+ ++++++|.+...+.|.-+..
T Consensus 435 ~~~~n------~G~~~a~n~g~~----~a~g~~i~~ld~D~~-~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~ 501 (625)
T 2z86_A 435 ISQKN------KGIGSASNTAVR----LCRGFYIGQLDSDDF-LEPDAVELCLDEFRK--DLSLACVYTTNRNIDREGNL 501 (625)
T ss_dssp EEECC------CCHHHHHHHHHH----HCCSSEEEECCTTCE-ECTTHHHHHHHHHHH--CTTCSEEEEEEEEECTTSCE
T ss_pred EeCCC------CCHHHHHHHHHH----hcCCCEEEEECCCcc-cChhHHHHHHHHHHh--CCCeeEEEeeeEEECCCCCE
Confidence 75333 369999999999 689999999999988 599999999999863 36788888765544322211
Q ss_pred HHHHHHhhhhhhhhcCCcccccccceeehhhhhccCcchhhhcccccCCCCCccchhhhhhcCCcHHHHHHHHHhhcCCC
Q 006357 242 LAILHESLGKGIVGIQGPFYAGTGTFHRRKVIYGLWPDEIENQGKCINSVNGQVGGELLQKSGNSKEFIKSAVDALEGKN 321 (648)
Q Consensus 242 ~~~f~~~~~~g~dg~~g~~~~Gtg~~~RR~aL~g~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~~~~s~~~~~~g~~ 321 (648)
....+.......+.......+|++.++||+++
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~------------------------------------------------ 533 (625)
T 2z86_A 502 ISNGYNWPIYSREKLTSAMICHHFRMFTARAW------------------------------------------------ 533 (625)
T ss_dssp EEECCCCSSCCHHHHTTSCCCCSCEEEEHHHH------------------------------------------------
T ss_pred eccCcccccCCHHHHhhcccCCceEEEEHHHH------------------------------------------------
Confidence 00000000000112223445666777777665
Q ss_pred CCCCCCchhHHHHhhhhcccccccccccccccccccc-cccchHHHHHHHHhCCcEEEEeCCCCCccc--ccCCCCHHHH
Q 006357 322 TGFSSNLSDSLKAANQVAGCGYEYGSSWGKKVGWLYG-SATEDILTGLMIHAKGWKTSYCSPDPHAFL--GCGPSDLPAA 398 (648)
Q Consensus 322 ~~~~~~~~~~~~~a~~v~~c~ye~~t~wgk~~G~~~~-svtED~~t~~~l~~~Gwrs~y~~~~~~a~~--g~aP~tl~~~ 398 (648)
.++ |||+.. ...||.++.+|+...| ++.|++ +....+ .....+....
T Consensus 534 --------------~~~--------------ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~-~~~~~~r~h~~~~s~~~~ 583 (625)
T 2z86_A 534 --------------NLT--------------EGFNESISNAVDYDMYLKLSEVG-PFKHIN-KICYNRVLHGENTSIKKL 583 (625)
T ss_dssp --------------TTT--------------TCCCSSCSSCHHHHHHHHHTTTS-CEEEEE-EEEEEEECC----CCSSH
T ss_pred --------------HHh--------------CCCCCccCChHHHHHHHHHHHhC-CEEEeC-CcEEEEEECCCccchhhH
Confidence 234 366653 3679999999999999 899996 443322 3445566777
Q ss_pred HHHhhHhhchhHHHH
Q 006357 399 MRQQKRWAMGLLEIL 413 (648)
Q Consensus 399 ~~Qr~RWa~G~~qi~ 413 (648)
..|+.+|.+...+.+
T Consensus 584 ~~~~~~~~~~~~~~l 598 (625)
T 2z86_A 584 DIQKENHFKVVNESL 598 (625)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 788888876555554
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.37 E-value=5.4e-13 Score=148.56 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=84.1
Q ss_pred CeeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccC
Q 006357 1 MFVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLG 80 (648)
Q Consensus 1 vfv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~ 80 (648)
|.|+| |+|+...+.+|+.|+++..||...++|+|+|||+++.|...+.
T Consensus 70 VIIp~---yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~----------------------------- 117 (501)
T 2ffu_A 70 VVITF---HNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL----------------------------- 117 (501)
T ss_dssp EEEEE---SSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG-----------------------------
T ss_pred EEEEe---CcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH-----------------------------
Confidence 34666 8998778999999999999997668999999999996521000
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEE
Q 006357 81 ESAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLI 160 (648)
Q Consensus 81 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~ 160 (648)
+ ..|++.
T Consensus 118 -------------------------------~------------------------------------------~~~~v~ 124 (501)
T 2ffu_A 118 -------------------------------G------------------------------------------KIEKVR 124 (501)
T ss_dssp -------------------------------G------------------------------------------GBTTEE
T ss_pred -------------------------------h------------------------------------------cCCCEE
Confidence 0 025677
Q ss_pred EEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 161 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 161 Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
|+..+++. ++++|+|.|++ .++||+|+++|+|.. ++|++|.+++..+.+
T Consensus 125 vi~~~~n~-----G~~~A~N~G~~----~A~gd~i~flD~D~~-~~p~~L~~ll~~~~~ 173 (501)
T 2ffu_A 125 VLRNDRRE-----GLMRSRVRGAD----AAQAKVLTFLDSHCE-CNEHWLEPLLERVAE 173 (501)
T ss_dssp EEECSSCC-----HHHHHHHHHHH----HCCSSEEEECCSSEE-ECTTCHHHHHHHHHH
T ss_pred EEECCCCc-----CHHHHHHHHHH----hcCCCEEEEECCCcc-cCccHHHHHHHHHHh
Confidence 88776644 49999999999 689999999999988 589999999999975
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.05 E-value=7.9e-10 Score=116.51 Aligned_cols=53 Identities=21% Similarity=0.144 Sum_probs=44.3
Q ss_pred CCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcCC
Q 006357 173 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQSP 231 (648)
Q Consensus 173 ~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~P 231 (648)
.+|++|+|.|++ .++|+||+.+|+|....+|++|.+++..+.+ ++++++|++.
T Consensus 117 ~G~~~a~n~g~~----~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~--~~~~~~v~g~ 169 (329)
T 3ckj_A 117 PGKGEALWRSLA----ASRGDIVVFVDSDLINPHPMFVPWLVGPLLT--GDGVHLVKSF 169 (329)
T ss_dssp CSHHHHHHHHHH----HCCCSEEEECCTTEESCCTTHHHHHHHHHHS--CSSCCEEEEE
T ss_pred CCHHHHHHHHHH----hCCCCEEEEECCCCCCcChHHHHHHHHHHHh--CCCccEEEEE
Confidence 369999999999 6899999999999862489999999999763 3677778764
No 10
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.00 E-value=3.5e-11 Score=140.12 Aligned_cols=103 Identities=16% Similarity=0.121 Sum_probs=0.0
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhHHHHHHHHHHHhhhhhhhhhhcccccCCccccccCC
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLIFYSLVEASKFAKLWVPFCKKYNVQVRAPFRYFLGE 81 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t~~~l~ea~~fa~~W~pfc~k~~i~~r~p~~yf~~~ 81 (648)
.|+| ||++ ..+.+++-|+++++|| .++|+|+|||+++.|.+.+.+..+
T Consensus 7 IIp~---yN~~-~~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t~~il~~~~~-------------------------- 54 (729)
T 3l7i_A 7 IVTY---YNAE-EYITGCLESIKQQRTQ--DFNLIIVNDGSTDQSKKLMDEAIK-------------------------- 54 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEc---CCCH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCCcHHHHHHHHHH--------------------------
Confidence 3455 6766 7889999999999999 899999999999976333322100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhccccccccCcccccccccccCCCccEEEEecCCCcccCCCCcEEE
Q 006357 82 SAKPPSTSSREFQQDWKMMKEEYEQLNRNIEQAAKKSFLFDMTGEMAVFSDTERRDHPAIVKVIWENKEDLSNGLPHLIY 161 (648)
Q Consensus 82 ~~~~~~~~~~~~~~e~~~~k~~y~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vl~d~~~~~~~~~p~l~Y 161 (648)
.|+ +++.+
T Consensus 55 ---------------------~~~---------------------------------------------------~~i~~ 62 (729)
T 3l7i_A 55 ---------------------DYD---------------------------------------------------KNIRF 62 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------hCC---------------------------------------------------CCEEE
Confidence 000 34566
Q ss_pred EEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhh
Q 006357 162 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLL 218 (648)
Q Consensus 162 v~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~ 218 (648)
+..+++. ++++|.|.|++ .++|+||+.+|+|.+ ..|++|.+++..+.
T Consensus 63 i~~~~n~-----G~~~arN~gi~----~A~gdyI~flD~Dd~-~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 63 IDLDENS-----GHAHARNIALE----EVETPYFMFLDADDE-LASYAITFYLEKFN 109 (729)
T ss_dssp ---------------------------------------------------------
T ss_pred EECCCCC-----CHHHHHHHHHH----hccCCEEEEECCCCC-CChhHHHHHHHHhc
Confidence 6655433 58999999999 789999999999998 58999999999996
No 11
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.97 E-value=6e-10 Score=128.37 Aligned_cols=65 Identities=14% Similarity=0.101 Sum_probs=48.8
Q ss_pred CcEEEEEccCCCCCCCCCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcC
Q 006357 157 PHLIYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQS 230 (648)
Q Consensus 157 p~l~Yv~Rekr~g~~~~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~ 230 (648)
+++.|+..+| .+.|+|.|.|++..--..++|||+.+|+|.+ ++|++|.+++.++.+. ++++.|+.
T Consensus 240 ~~I~vI~~~N------~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~-~~pd~L~~ll~~l~~~--~~~~~vg~ 304 (657)
T 4fix_A 240 SRLSIHDQPN------LGGSGGYSRVMYEALKNTDCQQILFMDDDIR-LEPDSILRVLAMHRFA--KAPMLVGG 304 (657)
T ss_dssp GGEEEEECCC------CHHHHHHHHHHHHHHHHCCCSEEEEECSSEE-ECTHHHHHHHHHHHHB--SSCCEEEE
T ss_pred CCEEEEECCC------CCHHHHHHHHHHHHHhcCCCCEEEEECCCCc-cChhHHHHHHHHHHhC--CCcEEEEe
Confidence 5577776553 3589999999984311126899999999987 5899999999999742 56666663
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=98.46 E-value=1.1e-06 Score=94.88 Aligned_cols=51 Identities=22% Similarity=0.262 Sum_probs=42.7
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcCCCCcEEEEcC
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGSKEGDCAFVQS 230 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~~~~~va~VQ~ 230 (648)
+|++|+|.|++ .++|+||+.+|||....+|++|.+++..+.+ ++++++|..
T Consensus 166 G~g~A~n~G~~----~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~--~p~~d~v~G 216 (387)
T 3f1y_A 166 GKGDAMWRALS----VTRGDLVLYIDADTRDFRPQLAYGVLGPVLE--VPGVRFVKA 216 (387)
T ss_dssp SHHHHHHHHTT----TCCSSEEEECCTTCSSCCTHHHHTTHHHHHH--STTCCEEEE
T ss_pred CHHHHHHHHHH----hcCCCEEEEEcCCCCcCCHHHHHHHHHHHHH--CCCceEEEE
Confidence 59999999999 6899999999999862489999999999964 245666664
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=98.17 E-value=4.9e-07 Score=93.89 Aligned_cols=60 Identities=13% Similarity=-0.065 Sum_probs=42.9
Q ss_pred ccccccc---cchHHHHHHHHhCCcEEEEeCCCCC----------cccccCCCCHHHHHHHhhHhhchhHHHH
Q 006357 354 GWLYGSA---TEDILTGLMIHAKGWKTSYCSPDPH----------AFLGCGPSDLPAAMRQQKRWAMGLLEIL 413 (648)
Q Consensus 354 G~~~~sv---tED~~t~~~l~~~Gwrs~y~~~~~~----------a~~g~aP~tl~~~~~Qr~RWa~G~~qi~ 413 (648)
||+..-. .||.+++.|++.+||++.+.++... ......|+.++.+.+||.||+++.+..+
T Consensus 191 GFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 191 GFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp SCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred CCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 5654333 5999999999999998874422100 0124579999999999999999988775
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=97.99 E-value=2.2e-05 Score=79.08 Aligned_cols=51 Identities=2% Similarity=-0.132 Sum_probs=41.8
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhcC--CCCcEEEEc
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLGS--KEGDCAFVQ 229 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d~--~~~~va~VQ 229 (648)
..|.|+|.|++ .++|||++.+|+|.++ +|++|.+++.++.+. .++++|.|-
T Consensus 61 g~a~a~N~Gi~----~A~g~yl~fln~D~~~-~~~~l~~l~~~~~~~~~~~~~vg~vg 113 (249)
T 2nxv_A 61 HGFSWHKQMLP----RCKGRYVIFCHEDVEL-VDRGYDDLVAAIEALEEADPKWLVAG 113 (249)
T ss_dssp CTTTHHHHHGG----GCCSSEEEEEETTEEC-SSCCHHHHHHHHHHHHHHCTTEEEEE
T ss_pred cHHHHHHHHHH----hcCCCEEEEECCCccc-CccHHHHHHHHHHhcccCCCCeeEEe
Confidence 35899999999 6899999999999985 899999999998631 026677764
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=97.45 E-value=0.00074 Score=73.06 Aligned_cols=42 Identities=19% Similarity=0.060 Sum_probs=35.8
Q ss_pred CCchHHHHHHH----HhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhh
Q 006357 173 HYKAGAMNVLT----RVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLL 218 (648)
Q Consensus 173 ~~KAGaLN~~L----~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~ 218 (648)
.+|++|+|.|+ + .++||+|+++|||..-.+|+.+.+++..+.
T Consensus 74 ~GkG~Al~~G~~~Al~----~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 74 PGKGDGMNTALRYFLE----ETQWERIHFYDADITSFGPDWITKAEEAAD 119 (397)
T ss_dssp SSHHHHHHHHHHHHHH----HCCCSEEEECCTTCSSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH----hCCCCEEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 36999999999 6 488999999999964237999999998875
No 16
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=96.46 E-value=0.011 Score=62.75 Aligned_cols=40 Identities=15% Similarity=0.035 Sum_probs=32.9
Q ss_pred eeecCCCCCCChHHHHHHHHHHHhccCCCCceEEEEecCCCChhH
Q 006357 2 FVTTADVELEPPIMTVNTVLSLLAVDYPAHKLACYISDDACSPLI 46 (648)
Q Consensus 2 fv~t~dp~~Ep~~~v~~tvls~la~dYP~~k~~vyv~DDG~s~~t 46 (648)
-|.| +|-| . +..++-|++..+.+.++..++|+|||+...|
T Consensus 7 iI~~---yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~ 46 (343)
T 1fo8_A 7 LVIA---CDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEET 46 (343)
T ss_dssp EEEE---SSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHH
T ss_pred EEEE---CCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHH
Confidence 3555 7777 5 8899999999998888999999999987643
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=94.12 E-value=0.2 Score=53.86 Aligned_cols=42 Identities=24% Similarity=0.112 Sum_probs=31.6
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhh
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLL 218 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~ 218 (648)
+|..||-.|+..+. ..++++|+.+|||-+ .|..+.+.+.-+.
T Consensus 144 GKG~Am~aGl~~A~-~~~gd~Vv~~DaDl~--iP~~v~~~~kgy~ 185 (394)
T 2zu9_A 144 GKGEGMLVGLLLAK-AIGAEYVGFVDADNY--IPGAVNEYVKDYA 185 (394)
T ss_dssp SHHHHHHHHHHHHH-HTTCSEEEECCSCBS--CHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHh-hCCCCEEEEEeCCCC--CHHHHHHHHHHhh
Confidence 69999999998421 018999999999975 5888866555443
No 18
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=92.25 E-value=0.28 Score=51.96 Aligned_cols=42 Identities=19% Similarity=0.214 Sum_probs=30.6
Q ss_pred CCchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHh
Q 006357 173 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLL 217 (648)
Q Consensus 173 ~~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f 217 (648)
.+|+++|=.|+.... ...++||..+|||.++ |....+.+..|
T Consensus 142 ~GKGegmi~Gi~~Ak-~~~geYVgFvDADdyi--~~~v~Eyvk~y 183 (391)
T 2wvl_A 142 SGKAEGMILALVFAA-LSGRRYVGFIDADNYF--PGAVWEYVRAY 183 (391)
T ss_dssp CSHHHHHHHHHHHHH-HTTCSEEEECCSCBSC--HHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHH-hcCCCEEEEEcCcCCC--ccCHHHHHHHH
Confidence 579999999998422 2489999999999996 34444444443
No 19
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=44.35 E-value=38 Score=33.03 Aligned_cols=45 Identities=18% Similarity=0.208 Sum_probs=31.6
Q ss_pred chHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 175 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 175 KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
....+-+||+...-..+.+++++.|||+=.-+++.+++++..+.+
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 356677777742100125899999999755579999999988864
No 20
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=37.15 E-value=47 Score=33.83 Aligned_cols=53 Identities=15% Similarity=-0.051 Sum_probs=37.2
Q ss_pred cchHHHHHHHHhCCcEEEEeCCCCC----ccc---------ccCCCCHHHHHHHhhHhhchhHHHH
Q 006357 361 TEDILTGLMIHAKGWKTSYCSPDPH----AFL---------GCGPSDLPAAMRQQKRWAMGLLEIL 413 (648)
Q Consensus 361 tED~~t~~~l~~~Gwrs~y~~~~~~----a~~---------g~aP~tl~~~~~Qr~RWa~G~~qi~ 413 (648)
.||.++..|+...|.++........ .+. ...|..+...-.+++||..+.+..+
T Consensus 185 gEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~dGLnsl 250 (287)
T 3lw6_A 185 LEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKTGLDNV 250 (287)
T ss_dssp SHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSCSGGGC
T ss_pred ccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCCCCeee
Confidence 6999999999999998865431000 010 1335567778889999998887765
No 21
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=34.89 E-value=43 Score=32.52 Aligned_cols=46 Identities=11% Similarity=0.013 Sum_probs=33.0
Q ss_pred CchHHHHHHHHhcCC---CCCCcEEEEecCCCCCCchHHHHHHHHHhhc
Q 006357 174 YKAGAMNVLTRVSGL---MTNAPFMLNVDCDMYANNPEIVLQAMCLLLG 219 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~---~t~~~~i~vlDaD~~~p~p~~L~~~v~~f~d 219 (648)
...+++-++++...- ..+.++|++.|||+-.-.++.+++++..+.+
T Consensus 84 ~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~ 132 (246)
T 3f1c_A 84 DRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALE 132 (246)
T ss_dssp SHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHh
Confidence 356777777764210 0236899999999844589999999998864
No 22
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=25.12 E-value=1.3e+02 Score=27.88 Aligned_cols=41 Identities=15% Similarity=-0.003 Sum_probs=30.9
Q ss_pred CchHHHHHHHHhcCCCCCCcEEEEecCCCCCCchHHHHHHHHHh
Q 006357 174 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLL 217 (648)
Q Consensus 174 ~KAGaLN~~L~~s~~~t~~~~i~vlDaD~~~p~p~~L~~~v~~f 217 (648)
+-++++..+++. ..+.+.+++++||+-.-+++.+++++..+
T Consensus 72 G~~~si~~al~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 72 GISTSLKLGLRF---FKDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp CHHHHHHHHHHH---TTTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CHHHHHHHHHHh---hccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 357788888874 23448999999998323789999988877
No 23
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=23.51 E-value=2.1e+02 Score=28.61 Aligned_cols=27 Identities=30% Similarity=0.492 Sum_probs=23.3
Q ss_pred CCCcEEEEecCCCCCCchHHHHHHHHHh
Q 006357 190 TNAPFMLNVDCDMYANNPEIVLQAMCLL 217 (648)
Q Consensus 190 t~~~~i~vlDaD~~~p~p~~L~~~v~~f 217 (648)
.+.++++..|-|+|+ +.+-|++.+..+
T Consensus 92 ~~~~Wf~~~DDDtyv-~~~nL~~~L~~~ 118 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYV-NPKALLQLLKTF 118 (280)
T ss_dssp HTCSEEEEEETTEEE-CHHHHHHHHTTS
T ss_pred CCCcEEEEeCCCcEE-cHHHHHHHHHhC
Confidence 689999999999997 788888877655
Done!