Query 006358
Match_columns 648
No_of_seqs 125 out of 150
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 22:53:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006358.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006358hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ndz_E Endoglucanase D; cellot 95.3 0.039 1.3E-06 48.9 7.2 54 209-263 3-56 (107)
2 3icg_A Endoglucanase D; cellul 93.0 0.16 5.4E-06 54.2 7.3 58 205-263 379-436 (515)
3 1exg_A EXO-1,4-beta-D-glycanas 93.0 0.18 6E-06 44.5 6.4 56 206-263 5-60 (110)
4 1e5b_A Xylanase D; hydrolase, 92.3 0.046 1.6E-06 46.9 1.6 48 210-263 4-51 (87)
5 2cwr_A Chitinase; chitin-bindi 91.0 0.51 1.7E-05 41.6 6.9 48 211-263 12-59 (103)
6 1heh_C Endo-1,4-beta-xylanase 85.2 0.27 9.1E-06 42.3 1.2 51 207-263 2-52 (88)
7 3ndz_E Endoglucanase D; cellot 83.2 1.1 3.8E-05 39.7 4.3 40 62-101 16-55 (107)
8 1exg_A EXO-1,4-beta-D-glycanas 82.8 1 3.5E-05 39.6 4.0 39 62-100 20-58 (110)
9 3icg_A Endoglucanase D; cellul 60.9 9.9 0.00034 40.5 5.7 40 62-101 396-435 (515)
10 2cwr_A Chitinase; chitin-bindi 27.0 61 0.0021 28.4 4.2 36 62-100 22-57 (103)
No 1
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=95.30 E-value=0.039 Score=48.91 Aligned_cols=54 Identities=22% Similarity=0.406 Sum_probs=46.5
Q ss_pred EEEEEEEEEeeCCCeEEEEEEeccCccCCCCCceeeeeEcCCeeeEEecCceeee
Q 006358 209 LTIMYDVTRTYDSNYWAQVTVANHNPIGRLDNWKLSWDWMHDEFIYTMKGAYPYL 263 (648)
Q Consensus 209 iTI~wDV~q~~~~~Y~A~VTi~N~q~yr~idgW~L~W~W~~~E~IwsM~GA~~te 263 (648)
.++.|.|.+--.+||.|.|||.|.-- ..|++|+|+|++..++-|-++..|..+.
T Consensus 3 c~v~y~v~~~W~~Gf~~~vtVtN~g~-~~i~gWtv~~~~p~g~~it~~Wna~~s~ 56 (107)
T 3ndz_E 3 VEVTYAITNSWGSGASVNVTIKNNGT-TPINGWTLKWTMPINQTITNMWSASFVA 56 (107)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEECSS-SCEESCEEEEECCTTEEEEEEESEEEEE
T ss_pred cEEEEEEcccCCCCEEEEEEEEeCCC-CcccCcEEEEEcCCCCEEecccceEEEe
Confidence 47899998888999999999999743 3478999999999999999999997654
No 2
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=93.04 E-value=0.16 Score=54.24 Aligned_cols=58 Identities=21% Similarity=0.379 Sum_probs=50.2
Q ss_pred CCCCEEEEEEEEEeeCCCeEEEEEEeccCccCCCCCceeeeeEcCCeeeEEecCceeee
Q 006358 205 QSGDLTIMYDVTRTYDSNYWAQVTVANHNPIGRLDNWKLSWDWMHDEFIYTMKGAYPYL 263 (648)
Q Consensus 205 ~~GniTI~wDV~q~~~~~Y~A~VTi~N~q~yr~idgW~L~W~W~~~E~IwsM~GA~~te 263 (648)
+.|-.+++|.|.+.-.+||.|.|||.|.-- .-|+||+|+|++..++-|-++..|..+.
T Consensus 379 ~~~~~~~~~~~~~~W~~g~~~~v~v~n~~~-~~~~~W~~~~~~~~~~~i~~~wn~~~~~ 436 (515)
T 3icg_A 379 PQSAVEVTYAITNSWGSGASVNVTIKNNGT-TPINGWTLKWTMPINQTITNMWSASFVA 436 (515)
T ss_dssp --CCEEEEEEEEEECSSEEEEEEEEEECSS-SCEESCEEEEECCTTEEEEEEESEEEEE
T ss_pred CCCceEEEEEEecCCCCccEEEEEEEeCCC-CCcCCeEEEEEeCCCCEeeccccceEEe
Confidence 477899999999999999999999999754 3578999999999999999999998764
No 3
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=93.01 E-value=0.18 Score=44.55 Aligned_cols=56 Identities=14% Similarity=0.349 Sum_probs=47.0
Q ss_pred CCCEEEEEEEEEeeCCCeEEEEEEeccCccCCCCCceeeeeEcCCeeeEEecCceeee
Q 006358 206 SGDLTIMYDVTRTYDSNYWAQVTVANHNPIGRLDNWKLSWDWMHDEFIYTMKGAYPYL 263 (648)
Q Consensus 206 ~GniTI~wDV~q~~~~~Y~A~VTi~N~q~yr~idgW~L~W~W~~~E~IwsM~GA~~te 263 (648)
.|..+++|. .+.-.+||.|.|||.|.-- ..|++|+|.|++..++-|-++..|..+.
T Consensus 5 ~~~c~v~y~-~~~W~~Gf~~~vtVtN~g~-~~i~gWtv~~~~~~g~~i~~~Wna~~s~ 60 (110)
T 1exg_A 5 PAGCQVLWG-VNQWNTGFTANVTVKNTSS-APVDGWTLTFSFPSGQQVTQAWSSTVTQ 60 (110)
T ss_dssp CCCEEEECC-EEESSSEEEEEEEEEECSS-SCEESEEEEEECSSSCEEEEEESSEEEE
T ss_pred CCcEEEEEE-eCCCCCCEEEEEEEEeCCC-CcccceEEEEEcCCCcEEecccceEEEc
Confidence 467899998 7777899999999999643 3478999999999998898998887654
No 4
>1e5b_A Xylanase D; hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1e5c_A 1xbd_A 2xbd_A
Probab=92.25 E-value=0.046 Score=46.88 Aligned_cols=48 Identities=8% Similarity=0.101 Sum_probs=40.5
Q ss_pred EEEEEEEEeeCCCeEEEEEEeccCccCCCCCceeeeeEcCCeeeEEecCceeee
Q 006358 210 TIMYDVTRTYDSNYWAQVTVANHNPIGRLDNWKLSWDWMHDEFIYTMKGAYPYL 263 (648)
Q Consensus 210 TI~wDV~q~~~~~Y~A~VTi~N~q~yr~idgW~L~W~W~~~E~IwsM~GA~~te 263 (648)
+..|.|.+.-.+||.|.|+|.| +++|+|.|++..++=|-++..|..+.
T Consensus 4 ta~y~v~~~W~~Gf~~~vtVtn------~~gWtv~~~~~~g~~i~~~Wn~~~s~ 51 (87)
T 1e5b_A 4 SVTATRAEEWSDGFNVTYSVSG------SSAWTVNLALNGSQTIQASWNANVTG 51 (87)
T ss_dssp CCBCCBCCCCSSEEEEEEBCCS------CSSCCCEEECCTTCCEEEEESBCCEE
T ss_pred EEEEEECccCCCCEEEEEEEEc------cCceEEEEEcCCCCEEeeeeceeEec
Confidence 4567776667899999999998 69999999999999888888887664
No 5
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A
Probab=91.01 E-value=0.51 Score=41.60 Aligned_cols=48 Identities=10% Similarity=0.051 Sum_probs=40.2
Q ss_pred EEEEEEEeeCCCeEEEEEEeccCccCCCCCceeeeeEcCCeeeEEecCceeee
Q 006358 211 IMYDVTRTYDSNYWAQVTVANHNPIGRLDNWKLSWDWMHDEFIYTMKGAYPYL 263 (648)
Q Consensus 211 I~wDV~q~~~~~Y~A~VTi~N~q~yr~idgW~L~W~W~~~E~IwsM~GA~~te 263 (648)
.+|. .+--.+||.|.|||.|.- +++|+|.|++..++=|-++..|..+.
T Consensus 12 c~y~-~n~W~~Gf~~~vtVtN~g----~~gWtv~~~~~~g~~it~~Wna~~s~ 59 (103)
T 2cwr_A 12 LEVK-VNDWGSGAEYDVTLNLDG----QYDWTVKVKLAPGATVGSFWSANKQE 59 (103)
T ss_dssp EEEE-EEECSSEEEEEEEEEESS----CCCCEEEEEECTTCEEEEEESEEEEE
T ss_pred EEEE-ECCCCCceEEEEEEeCCC----CCcEEEEEECCCCcEEecccceEEec
Confidence 3676 455578999999999983 48999999999999999999888765
No 6
>1heh_C Endo-1,4-beta-xylanase D; hydrolase(xylan degradation), hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1hej_C
Probab=85.17 E-value=0.27 Score=42.27 Aligned_cols=51 Identities=10% Similarity=0.119 Sum_probs=41.2
Q ss_pred CCEEEEEEEEEeeCCCeEEEEEEeccCccCCCCCceeeeeEcCCeeeEEecCceeee
Q 006358 207 GDLTIMYDVTRTYDSNYWAQVTVANHNPIGRLDNWKLSWDWMHDEFIYTMKGAYPYL 263 (648)
Q Consensus 207 GniTI~wDV~q~~~~~Y~A~VTi~N~q~yr~idgW~L~W~W~~~E~IwsM~GA~~te 263 (648)
|--+.+|.|.+.-.+||.|.|||. + .++|+|.|++..++=|-++..|..+.
T Consensus 2 g~Ctaty~~~n~W~~Gf~a~vtVt-----g-~~gWtv~~~~~~gq~vt~~Wna~~s~ 52 (88)
T 1heh_C 2 GSCSVSAVRGEEWADRFNVTYSVS-----G-SSSWVVTLGLNGGQSVQSSWNAALTG 52 (88)
T ss_dssp CCCCCCCCCCSBCSSEEEEEEECS-----S-CCSCCCEEECCSSCCCCCEESSEEEC
T ss_pred CceEEEEEEcccCCCceEEEEEEe-----c-cccEEEEEECCCCCEEEccccccCcc
Confidence 344667777666779999999998 3 48999999999999898888887653
No 7
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=83.16 E-value=1.1 Score=39.66 Aligned_cols=40 Identities=15% Similarity=0.235 Sum_probs=34.8
Q ss_pred eeeeeeEEeecCcccccceeEeeeeccceEEEecCceeec
Q 006358 62 RFESTLTVLNNGLEQLKQWRAFVGFQHEEILVSASNAVLF 101 (648)
Q Consensus 62 ~F~s~~tv~N~g~~~lk~W~~~v~F~h~EiLVsa~gavl~ 101 (648)
.|.++++|+|+|.+.|.+|++-+.|.-.+-+.++=+|.+.
T Consensus 16 Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~it~~Wna~~s 55 (107)
T 3ndz_E 16 GASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFV 55 (107)
T ss_dssp EEEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEE
T ss_pred CEEEEEEEEeCCCCcccCcEEEEEcCCCCEEecccceEEE
Confidence 4999999999999999999999999877777777776653
No 8
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=82.84 E-value=1 Score=39.64 Aligned_cols=39 Identities=18% Similarity=0.330 Sum_probs=32.9
Q ss_pred eeeeeeEEeecCcccccceeEeeeeccceEEEecCceee
Q 006358 62 RFESTLTVLNNGLEQLKQWRAFVGFQHEEILVSASNAVL 100 (648)
Q Consensus 62 ~F~s~~tv~N~g~~~lk~W~~~v~F~h~EiLVsa~gavl 100 (648)
.|.+.++|+|+|.+.|.+|++-+.|...+-+.++=++.+
T Consensus 20 Gf~~~vtVtN~g~~~i~gWtv~~~~~~g~~i~~~Wna~~ 58 (110)
T 1exg_A 20 GFTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTV 58 (110)
T ss_dssp EEEEEEEEEECSSSCEESEEEEEECSSSCEEEEEESSEE
T ss_pred CEEEEEEEEeCCCCcccceEEEEEcCCCcEEecccceEE
Confidence 499999999999999999999999998766666655544
No 9
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=60.87 E-value=9.9 Score=40.55 Aligned_cols=40 Identities=15% Similarity=0.235 Sum_probs=35.3
Q ss_pred eeeeeeEEeecCcccccceeEeeeeccceEEEecCceeec
Q 006358 62 RFESTLTVLNNGLEQLKQWRAFVGFQHEEILVSASNAVLF 101 (648)
Q Consensus 62 ~F~s~~tv~N~g~~~lk~W~~~v~F~h~EiLVsa~gavl~ 101 (648)
.|.+++||+|+|...|.+|++-+.|.-.+-+.++=+|.++
T Consensus 396 g~~~~v~v~n~~~~~~~~W~~~~~~~~~~~i~~~wn~~~~ 435 (515)
T 3icg_A 396 GASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFV 435 (515)
T ss_dssp EEEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEE
T ss_pred ccEEEEEEEeCCCCCcCCeEEEEEeCCCCEeeccccceEE
Confidence 4999999999999999999999999877878888777664
No 10
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A
Probab=27.03 E-value=61 Score=28.38 Aligned_cols=36 Identities=19% Similarity=0.104 Sum_probs=27.7
Q ss_pred eeeeeeEEeecCcccccceeEeeeeccceEEEecCceee
Q 006358 62 RFESTLTVLNNGLEQLKQWRAFVGFQHEEILVSASNAVL 100 (648)
Q Consensus 62 ~F~s~~tv~N~g~~~lk~W~~~v~F~h~EiLVsa~gavl 100 (648)
.|.+.++|.|.|. .+|++-+.|.-.+-+-++=+|-+
T Consensus 22 Gf~~~vtVtN~g~---~gWtv~~~~~~g~~it~~Wna~~ 57 (103)
T 2cwr_A 22 GAEYDVTLNLDGQ---YDWTVKVKLAPGATVGSFWSANK 57 (103)
T ss_dssp EEEEEEEEEESSC---CCCEEEEEECTTCEEEEEESEEE
T ss_pred ceEEEEEEeCCCC---CcEEEEEECCCCcEEecccceEE
Confidence 4899999999986 79999999986665555544443
Done!