BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006360
(648 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3B7M6|NEDD1_BOVIN Protein NEDD1 OS=Bos taurus GN=NEDD1 PE=2 SV=1
Length = 659
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 98/176 (55%), Gaps = 3/176 (1%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + + Q +R L YS + LL + D+G
Sbjct: 127 YNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSIRHLKYSLFKKSLLGSVSDNGI 186
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFS-SDDKIIASVGLDKKLYTYDPGSRRPSSCIT 120
+ LWD +SP ++ H AP +GI FS ++ + +VGLDK++ YD S++ +
Sbjct: 187 VTLWDVNSQSPYHNFDSTHKAPASGICFSPVNELLFVTVGLDKRIILYDTSSKKLVKTLV 246
Query: 121 YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQ 176
+AP +++ F+ D L G+S G++ YD+R P+ + A +S V + +Q
Sbjct: 247 ADAPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPIKTISAHKTS--VQCIAFQ 300
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
Query: 545 VEPGIPPAINGGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIE 604
V G+ +++ + ++ + +P+ P S+ ++ Q ++ETLD F+++ H D+ NL +E
Sbjct: 558 VTAGVAGSLSEKIVDTIGNSRPNAPL-SSVQIRFIQNMIQETLDDFREACHRDIVNLQVE 616
Query: 605 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 645
+++QFHMQ +M +++ N+ L+ EI+ LR+EN +LR
Sbjct: 617 MIKQFHMQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 656
>sp|Q8NHV4|NEDD1_HUMAN Protein NEDD1 OS=Homo sapiens GN=NEDD1 PE=1 SV=1
Length = 660
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + + Q +R L YS + LL + D+G
Sbjct: 127 YNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGI 186
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFS-SDDKIIASVGLDKKLYTYDPGSRRPSSCIT 120
+ LWD +SP ++ H AP +GI FS ++ + ++GLDK++ YD S++ +
Sbjct: 187 VTLWDVNSQSPYHNFDSVHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLV 246
Query: 121 YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRA-- 178
+ P +++ F+ D L G+S G++ YD+R P+ + A +S V + +Q +
Sbjct: 247 ADTPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTS--VQCIAFQYSTV 304
Query: 179 ------------KPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214
KP +++ + A GG I+ P S+ T
Sbjct: 305 LTKSSLNKGCSNKPTTVNKRSVNVNAA-SGGVQNSGIVREAPATSIAT 351
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Query: 545 VEPGIPPAINGGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIE 604
V G+ +++ ++ S+ + + + P S ++ Q ++ETLD F+++ H D+ NL +E
Sbjct: 559 VTAGVASSLSEKIADSIGNNRQNAPLTS-IQIRFIQNMIQETLDDFREACHRDIVNLQVE 617
Query: 605 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 645
+++QFHMQ +M +++ N+ L+ EI+ LR+EN +LR
Sbjct: 618 MIKQFHMQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 657
>sp|P33215|NEDD1_MOUSE Protein NEDD1 OS=Mus musculus GN=Nedd1 PE=2 SV=2
Length = 660
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 97/176 (55%), Gaps = 3/176 (1%)
Query: 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
YN D ++AS SLSG++ILH++ + + ++Q +R + YS + LL + D+G
Sbjct: 127 YNWNDCYIASGSLSGEIILHSVTTNTSSTPFGHGSKQPIRHIKYSLFRKSLLGSVSDNGV 186
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFS-SDDKIIASVGLDKKLYTYDPGSRRPSSCIT 120
+ LWD +S ++ H AP +GI FS ++ + ++GLDK++ YD S++ +
Sbjct: 187 VTLWDVNSQSSYHTFDSTHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLV 246
Query: 121 YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQ 176
+ P +++ F+ D L G+S G++ YD+R P+ + A +S V + +Q
Sbjct: 247 ADTPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTS--VQCIAFQ 300
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Query: 545 VEPGIPPAINGGMSQSLKSPQPDPPQGSNFTLQLFQRTLEETLDSFQKSIHEDMRNLHIE 604
V G+ +++ + +L + +P P S ++ Q ++ETLD F+++ H D+ NL +E
Sbjct: 559 VTAGVASSLSEKIVDTLGNSRPGAPLTS-VQIRFIQNMIQETLDDFREACHRDIVNLQVE 617
Query: 605 ILRQFHMQETQMSNVMSSILENQAELMKEIKSLRKENHQLR 645
+++QFH+Q +M +++ N+ L+ EI+ LR+EN +LR
Sbjct: 618 MIKQFHIQLNEMHSLLERYSVNEG-LVAEIERLREENKRLR 657
>sp|Q54S59|WDR61_DICDI WD repeat-containing protein 61 homolog OS=Dictyostelium discoideum
GN=wdr61 PE=4 SV=1
Length = 299
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 86/150 (57%), Gaps = 8/150 (5%)
Query: 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWD 66
+L S+S SG++ ++++ +G K + + N+QVL + S N+ + V AG DGT+ +D
Sbjct: 111 NNLVSVSESGNISIYSVETGEKLRSISNTNKQVL-TMAISPNNEQIAV-AGLDGTVLCYD 168
Query: 67 T-TGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP--SSCITYEA 123
+GR +VS +K H P + FSSD K I + D ++ +DP S P +S + + +
Sbjct: 169 VESGR--RVSEIKAHGVPIRSLCFSSDSKTIFTGAEDSQIRLHDPNSSNPYIASLLGHSS 226
Query: 124 -PFSSLAFIDDDWILTAGTSNGRVVFYDIR 152
FS +A + D + ++G+ + +V +DI+
Sbjct: 227 FIFSLVASSNGDLLASSGSIDRKVCIWDIK 256
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 26 GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA 85
G K L+ + VL V +S +S+++ VTA DGT +W+ TGR V L+ +
Sbjct: 1414 GKKLTVLRGHQDAVLNV-RFSPDSQYI-VTASKDGTARVWNNTGRELAV--LRHYEKNIF 1469
Query: 86 GISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAF-IDDDWILTAGTSNG 144
FS+D + I + D ++ R C +E P F D +ILTA N
Sbjct: 1470 AAEFSADGQFIVTASDDNTAGIWEIVGREVGICRGHEGPVYFAQFSADSRYILTASVDNT 1529
Query: 145 RVVFYDIRGKP 155
+ +D G+P
Sbjct: 1530 ARI-WDFLGRP 1539
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 44 DYSRNSR-----HLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIAS 98
D+ RN+ +L+TA DGT LWD GR ++ + H++ FS D + I +
Sbjct: 1138 DWVRNAEFNCHGQILLTASRDGTARLWDLEGR--EIGLCQGHTSWVRNAQFSPDGQWIVT 1195
Query: 99 VGLDKKLYTYDPGSR 113
D +D S+
Sbjct: 1196 CSADGTARLWDLSSQ 1210
>sp|B6GZA1|SCONB_PENCW Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075
/ Wisconsin 54-1255) GN=sconB PE=3 SV=1
Length = 673
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRN---SRHLLVTAG 57
+ +C+++H+ + S GD IL L+ +A PN D ++ S ++T+G
Sbjct: 522 LADCENDHVGTSSQGGDNILSTLSPLLEATSPSHPNSPFGSSFDQDQDRIESPRYILTSG 581
Query: 58 DDGTLHLWDT-TGRSPKVSWLKQHSAPTAGI-SFSSDDKIIASVGLDKKLYTYDPGSRRP 115
D T+ LW+T TGR L+ GI + S+D IAS G+D+ + +DP R P
Sbjct: 582 VDTTIRLWETSTGRC-----LRTFFGHLEGIWALSADTLRIASGGMDRMVKIWDP--RIP 634
Query: 116 SSCITYE---APFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153
+ TYE A + + D +I G + +V YD R
Sbjct: 635 TGQDTYEGHSAAVNCIGLSDSRFI--TGGDDYQVRMYDFRA 673
Score = 36.6 bits (83), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 18/167 (10%)
Query: 51 HLLVTAGDDGTLHLWDT-TGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD 109
++L+T D T+ +WDT TG + LK H A + F DD + + LD+ + ++
Sbjct: 354 NILMTGSYDATVKIWDTDTGEELRT--LKGHVAGVRCLQF--DDTKLITGSLDRSIRVWN 409
Query: 110 PGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTSNGRVV-FYDIRGK-------PQPLTV 160
R CI+ Y ++ + D L A S R V ++ + K PQ +
Sbjct: 410 ---WRTGECISKYNGHAEAVIALHFDCTLLASASVDRTVKIWNFKDKSTFVLPHPQGVNA 466
Query: 161 LRACSSSEAVSSLCWQRAKPVF-IDETTCKAETALLGGAVGDSILMP 206
++ S S V + C A ++ +D TC GAV I +P
Sbjct: 467 VKIDSVSRTVLTACDDGAARLWDLDTKTCIRVFHNHIGAVQQVIALP 513
>sp|P29829|GBB2_DROME Guanine nucleotide-binding protein subunit beta-2 OS=Drosophila
melanogaster GN=Gbeta76C PE=1 SV=3
Length = 346
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 43 LDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD 102
+ ++ +SRH VT DG L +WDT + KV + SA ++FS +A G+D
Sbjct: 65 VHFAGDSRHC-VTGSLDGKLIIWDTW-TANKVQIIPLRSAWVMTVAFSPSGNFVACGGMD 122
Query: 103 KKLYTYDPGSRRPSSC-------ITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDI 151
+ YD +R S + YE SS F+DD ++T G+ + ++ +D+
Sbjct: 123 NQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDDGHLIT-GSGDMKICHWDL 177
>sp|P90917|RBA1_CAEEL Probable histone-binding protein rba-1 OS=Caenorhabditis elegans
GN=rba-1 PE=3 SV=1
Length = 412
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 25/137 (18%)
Query: 43 LDYSRNSRHLLVTAGDDGTLHLWD------TTGRSPKVSWLKQHSAPTAGISFSS-DDKI 95
+ +S L+TAGDDG + WD +G+ S K HS+ +SF + + +
Sbjct: 177 MSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFV 236
Query: 96 IASVGLDKKLYTYDPGSRRPS----------SCITYEAPFSSLAFIDDDWILTAGTSNGR 145
SVG D+KL +D +P +CIT+ PFS ++IL G+ +
Sbjct: 237 FGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFN-PFS-------EYILATGSVDKT 288
Query: 146 VVFYDIRGKPQPLTVLR 162
V +D+R + + L+
Sbjct: 289 VALWDMRNMRKKMYTLK 305
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 40 LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSD-DKIIAS 98
+ + ++ S ++L T D T+ LWD K+ LK H+ +SFS + ++AS
Sbjct: 267 VNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLAS 326
Query: 99 VGLDKKLYTYD 109
G D ++ +D
Sbjct: 327 SGSDDRVIVWD 337
>sp|Q9VAT2|DCA10_DROME DDB1- and CUL4-associated factor 10 homolog OS=Drosophila
melanogaster GN=CG1523 PE=1 SV=1
Length = 621
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG 111
L T DD T+ LWD K+ L HS I +SS DK++ S G D ++T+D
Sbjct: 104 LFATGSDDFTVALWDLRNMKQKLRVLHGHSNWVKNIEYSSKDKLLVSSGFDGSIFTWDIN 163
Query: 112 SR 113
S+
Sbjct: 164 SQ 165
>sp|Q4X0M4|SEC31_ASPFU Protein transport protein sec31 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=sec31 PE=3 SV=1
Length = 1263
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 29/156 (18%)
Query: 44 DYSRNSRHLLVTAGDDGTLHLWDT----TGRSPKV-SWLKQHSAPTAGISFS-SDDKIIA 97
DY NSR ++ A ++G+L LWD G S V S + +HS + F+ ++A
Sbjct: 78 DYEDNSRGVIAGALENGSLDLWDADKLINGSSDAVISRMTKHSGAIKALQFNPKHSNLLA 137
Query: 98 SVGLDKKLYTYDPGSRRPSSCITYEAPF---SSLAFIDD----DW------ILTAGTSNG 144
+ G +LY D + IT P+ S+ A DD DW IL G+S G
Sbjct: 138 TGGAKGELYISDLNN------ITN--PYRLGSAAARADDIECLDWNKKVAHILVTGSSAG 189
Query: 145 RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKP 180
V +D++ + + LT+ +AVS++ W KP
Sbjct: 190 FVTVWDVKTRKESLTLNNM--GRKAVSAVAWDPEKP 223
Score = 33.5 bits (75), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 20/150 (13%)
Query: 9 LASISLSGDLILHNLAS-------GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
LA+ G+L + +L + G+ AA D + LD+++ H+LVT G
Sbjct: 136 LATGGAKGELYISDLNNITNPYRLGSAAARADD-----IECLDWNKKVAHILVTGSSAGF 190
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDD--KIIASVGL--DKKLYTYD-PGSRRPS 116
+ +WD R ++ + +++ + K+I S L D +Y +D S P
Sbjct: 191 VTVWDVKTRKESLTLNNMGRKAVSAVAWDPEKPTKLITSTPLESDPLIYVWDLRNSHAPE 250
Query: 117 SCIT-YEAPFSSLAFI--DDDWILTAGTSN 143
+ +E+ SL++ D D +L++G N
Sbjct: 251 RTLKGHESGVLSLSWCPQDPDLLLSSGKDN 280
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 9 LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWD-T 67
LAS S + L + +G L+ + +V + +S N ++ T D T+ +WD
Sbjct: 1077 LASASADQSVRLWDCCTGRCVGILRGHSNRVYSAI-FSPNGE-IIATCSTDQTVKIWDWQ 1134
Query: 68 TGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSS-CITYEAPFS 126
G+ K L H+ I+FS D KI+AS D+ + +D + + CI + S
Sbjct: 1135 QGKCLKT--LTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVS 1192
Query: 127 SLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA 163
S+AF D ++ +G+ + V ++++ + L +LRA
Sbjct: 1193 SVAFSPDGEVVASGSQDQTVRIWNVK-TGECLQILRA 1228
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWD 66
E LAS S + L ++ G L + V R + +S + L +A D T+ LWD
Sbjct: 739 ETLASASGDKTIKLWDIQDGTCLQTLTGHTDWV-RCVAFSPDGNTLASSAADH-TIKLWD 796
Query: 67 TT-GRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK--KLYTYDPGSRRPSSCITYEA 123
+ G+ + LK H+ ++FS+D + +AS D+ K++ Y G + I +
Sbjct: 797 VSQGKCLRT--LKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTY-IGHTN 853
Query: 124 PFSSLAFIDDDWILTAGTSNGRVVFYDIR 152
S+A+ D IL +G+ + + +D +
Sbjct: 854 SVYSIAYSPDSKILVSGSGDRTIKLWDCQ 882
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 43 LDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD 102
+ YS +S+ +LV+ D T+ LWD + L H+ ++FS D + +A V LD
Sbjct: 858 IAYSPDSK-ILVSGSGDRTIKLWDCQTHIC-IKTLHGHTNEVCSVAFSPDGQTLACVSLD 915
Query: 103 KKLYTYDPGSRRPSSCITYEAPFSS------LAFIDDDWILTAGTSNGRVVFYD 150
+ + ++ R C+ +A + + +AF D IL +G+++ V +D
Sbjct: 916 QSVRLWNC---RTGQCL--KAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWD 964
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 20 LHNLASGAKAAELKDPN-----EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74
++++ +G K L+D N + +R + +S + ++L T +D + +WD R+ +
Sbjct: 322 IYDVETGEKLCILQDENIDLTGDLYIRSVCFSPDGKYL-ATGAEDKLIRVWDIQSRTIRN 380
Query: 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDD 134
+ H + FS D + IAS D+ + +D + + +S ++ E +++A D
Sbjct: 381 T-FHGHEQDIYSLDFSRDGRTIASGSGDRTVRLWDIETGQNTSVLSIEDGVTTVAISPDK 439
Query: 135 WILTAGTSNGRVVFYDIRG 153
+ AG+ + V +D+RG
Sbjct: 440 QFVAAGSLDKSVRVWDMRG 458
>sp|Q6FXI8|HAT2_CANGA Histone acetyltransferase type B subunit 2 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=HAT2 PE=3 SV=1
Length = 419
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 43 LDYSRNSRHLLVTAGDDGTLHLWDTTGRS----PKVSWLKQHSAPTAGISF-SSDDKIIA 97
L ++ N ++ L++ DD + LWD + P +++ H+ + + SS+ I
Sbjct: 185 LAFNANEKYSLLSGSDDSNIALWDISNFEKNIKPTITFEDAHTDIINDVKWHSSEAHIFG 244
Query: 98 SVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAF--IDDDWILTAGTSNGRVVFYDIRGKP 155
SV D + +D S + I + P+++LAF + AGT N V YDIR
Sbjct: 245 SVSEDSTMKLFDKRSSQIIHNINTKKPYNTLAFSPFSSNLFAAAGTDN-LVYLYDIRDVS 303
Query: 156 QPLTVLRACSSSEAVSSL 173
PL + +AV+++
Sbjct: 304 NPLYAM--TGHEDAVTAI 319
>sp|P90916|LIN53_CAEEL Probable histone-binding protein lin-53 OS=Caenorhabditis elegans
GN=lin-53 PE=1 SV=2
Length = 417
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 43 LDYSRNSRHLLVTAGDDGTLHLWD------TTGRSPKVSWLKQHSAPTAGISFSS-DDKI 95
L ++ N L+++A DD T+ WD G K H + +++ D +
Sbjct: 178 LSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGV 237
Query: 96 IASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFI-DDDWILTAGTSNGRVVFYDIRG 153
SVG DKKL +D + P CI + A + LAF ++IL G+++ V +D+R
Sbjct: 238 FGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Score = 33.1 bits (74), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 34 DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFS-SD 92
D + + L ++ S +L T D T+ LWD K+ + H + +S +
Sbjct: 262 DAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHN 321
Query: 93 DKIIASVGLDKKLYTYD 109
+ I+AS G DK+L+ +D
Sbjct: 322 ETILASSGTDKRLHVWD 338
>sp|P97865|PEX7_MOUSE Peroxisomal targeting signal 2 receptor OS=Mus musculus GN=Pex7
PE=2 SV=1
Length = 318
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 18 LILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77
L+L SG + D N+ + V +S N+ H+LVT DG+L LWDT + +
Sbjct: 44 LVLDQNESGLQIFRSFDWNDGLFDV-TWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVY 102
Query: 78 KQHSAPTAGISFSS--DDKIIASVGLDKKLYTYDP 110
K+H+ + +S ++++ S D+ + +DP
Sbjct: 103 KEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDP 137
>sp|P40066|GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GLE2 PE=1 SV=1
Length = 365
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 5/134 (3%)
Query: 32 LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS 91
+ P E + + +S + + DG + +WD P+ + S+P +S+
Sbjct: 31 INSPAEDSISDIAFSPQQDFMFSASSWDGKVRIWDVQNGVPQGRAQHESSSPVLCTRWSN 90
Query: 92 DDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFID----DDWILTAGTSNGRVV 147
D +AS G D L YD S + + AP L F+ + + G+ + +
Sbjct: 91 DGTKVASGGCDNALKLYDIASGQTQQIGMHSAPIKVLRFVQCGPSNTECIVTGSWDKTIK 150
Query: 148 FYDIRGKPQPLTVL 161
++D+R +PQP++ +
Sbjct: 151 YWDMR-QPQPVSTV 163
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Query: 9 LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT 68
+AS SL D+ L ++ + K + Q +R L +S + + L +A DD T+ LWD T
Sbjct: 120 VASGSLDTDIKLWDVRRKGCIFKYKS-HTQAVRCLRFSPDGK-WLASAADDHTVKLWDLT 177
Query: 69 GRSPKVSW-LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEA-PFS 126
+ KV + HS P + F + ++AS D+ + +D SCI EA P
Sbjct: 178 --AGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVR 235
Query: 127 SLAFIDDDWILTAGTSNGRVVF 148
+ F D L G + V+
Sbjct: 236 CILFNPDGCCLYGGFQDSLRVY 257
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 38 QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIA 97
Q +R L +S + + L +A DD T+ LWD T +S H+ P + F ++ ++A
Sbjct: 148 QAVRCLRFSPDGK-WLASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFHPNEYLLA 205
Query: 98 SVGLDKKLYTYDPGSRRPSSCITYE-APFSSLAFIDDDWILTAGTSNGRVVF 148
S D+ + +D + SCI E P S+ F D L +G + V+
Sbjct: 206 SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 11/182 (6%)
Query: 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD-P 110
+ + D + LWD R V + HS + FS D K +AS D + +D
Sbjct: 119 FVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 111 GSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYD---------IRGKPQPLTVL 161
+ S + P + + F ++++L +G+S+ + F+D I G+P P+ +
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 162 RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSVSLST 221
+ S C + + C + G V D + D L V S ++S+
Sbjct: 238 LFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSS 297
Query: 222 AV 223
V
Sbjct: 298 YV 299
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 43 LDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD 102
L + S LL T GDD ++LW + +S L H++P + ++ +++I +
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMS-LTGHTSPVESVRLNTPEELIVAGSQS 84
Query: 103 KKLYTYD-PGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVL 161
+ +D ++ + + ++A SL F + +G+ + + +DIR K V
Sbjct: 85 GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG---CVF 141
Query: 162 RACSSSEAVSSL 173
R S+AV L
Sbjct: 142 RYRGHSQAVRCL 153
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 38 QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIA 97
Q +R L +S + + L +A DD T+ LWD T +S H+ P + F ++ ++A
Sbjct: 148 QAVRCLRFSPDGK-WLASAADDHTVKLWDLTA-GKMMSEFPGHTGPVNVVEFHPNEYLLA 205
Query: 98 SVGLDKKLYTYDPGSRRPSSCITYE-APFSSLAFIDDDWILTAGTSNGRVVF 148
S D+ + +D + SCI E P S+ F D L +G + V+
Sbjct: 206 SGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVY 257
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 11/195 (5%)
Query: 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD-P 110
+ + D + LWD R V + HS + FS D K +AS D + +D
Sbjct: 119 FVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 111 GSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYD---------IRGKPQPLTVL 161
+ S + P + + F ++++L +G+S+ + F+D I G+P P+ +
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 162 RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSVSLST 221
+ S C + + C + G V D + D L V S ++S+
Sbjct: 238 LFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSS 297
Query: 222 AVSGSRPNSRSGPSA 236
V +R+G A
Sbjct: 298 YVVDLTRVTRTGTVA 312
Score = 36.2 bits (82), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 43 LDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD 102
L + S LL T GDD ++LW + +S L H++P + ++ +++I +
Sbjct: 26 LVLGKASGRLLATGGDDCRVNLWSINKPNCIMS-LTGHTSPVESVRLNTPEELIVAGSQS 84
Query: 103 KKLYTYD-PGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVL 161
+ +D ++ + + ++A SL F + +G+ + + +DIR K V
Sbjct: 85 GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG---CVF 141
Query: 162 RACSSSEAVSSL 173
R S+AV L
Sbjct: 142 RYRGHSQAVRCL 153
>sp|O00628|PEX7_HUMAN Peroxisomal targeting signal 2 receptor OS=Homo sapiens GN=PEX7
PE=1 SV=1
Length = 323
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 21 HNLASGAKAAELKDPNEQVLRV------------LDYSRNSRHLLVTAGDDGTLHLWDTT 68
H +G + DP+E LR+ + +S N+ H+L+T DG+L LWDT
Sbjct: 39 HYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNEHVLITCSGDGSLQLWDTA 98
Query: 69 GRSPKVSWLKQHSAPTAGISFSS--DDKIIASVGLDKKLYTYDP 110
+ + K+H+ + +S ++++ S D+ + +DP
Sbjct: 99 KAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDP 142
>sp|Q7TMQ7|WDR91_MOUSE WD repeat-containing protein 91 OS=Mus musculus GN=Wdr91 PE=1 SV=1
Length = 748
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 34 DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDD 93
DP + ++ N +LLVT DG + L+D +SW K H + FS D+
Sbjct: 560 DPEPIAINCTAFNHNG-NLLVTGAADGVIRLFDMQQHECAMSW-KAHCGEVYSVEFSCDE 617
Query: 94 KIIASVGLDKKLYTYD 109
+ S+G D+K ++
Sbjct: 618 NAVYSIGEDRKFIQWN 633
>sp|Q0ULF5|SEC31_PHANO Protein transport protein SEC31 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=SEC31 PE=3 SV=3
Length = 1256
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 47 RNSRHLLVTAGDDGTLHLWDT----TGRS-PKVSWLKQHSAPTAGISFSS-DDKIIASVG 100
++ R ++ A D G L LWD TG S ++ + +H+ P I F+ I+AS G
Sbjct: 82 QHPRGIIAGALDSGALVLWDAEKLRTGASDAQIDQIDKHTGPIQAIQFNPFRPNILASAG 141
Query: 101 LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDW------ILTAGTSNGRVVFYDIRGK 154
+L+ +D S + +A + + DW IL G+S G V +D++GK
Sbjct: 142 AKGELFVHDLDDESKSFRLG-KAGANPDEYTTLDWNKKVAHILATGSSGGFVTVWDVKGK 200
Query: 155 PQPLTVLRACSSSEAVSSLCW 175
+ LT+ + VS++ W
Sbjct: 201 KENLTLNH--FGRKTVSAVSW 219
Score = 37.4 bits (85), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 9 LASISLSGDLILHNLASGAKAAEL----KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHL 64
LAS G+L +H+L +K+ L +P+E LD+++ H+L T G + +
Sbjct: 137 LASAGAKGELFVHDLDDESKSFRLGKAGANPDE--YTTLDWNKKVAHILATGSSGGFVTV 194
Query: 65 WDTTGR 70
WD G+
Sbjct: 195 WDVKGK 200
>sp|Q61Y48|LIN53_CAEBR Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae
GN=lin-53 PE=3 SV=2
Length = 416
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 43 LDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ------HSAPTAGISFSS-DDKI 95
L ++ N L+++A DD T+ WD G + LK H + +++ D +
Sbjct: 178 LSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGV 237
Query: 96 IASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFI-DDDWILTAGTSNGRVVFYDIR 152
SVG DKKL +D + P I + A + LAF ++IL G+++ V +D+R
Sbjct: 238 FGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 34 DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFS-SD 92
D + + L ++ S +L T D T+ LWD K+ + H + +S +
Sbjct: 262 DAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHN 321
Query: 93 DKIIASVGLDKKLYTYD 109
+ I+AS G DK+L+ +D
Sbjct: 322 ETILASSGTDKRLHVWD 338
>sp|Q6P1V3|WSB1_XENTR WD repeat and SOCS box-containing protein 1 OS=Xenopus tropicalis
GN=wsb1 PE=2 SV=1
Length = 422
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 5 KDEHLASISLS-GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLH 63
+D+ L + LS G + + ++ +G L D E V+R L ++ + +LV+A D TL
Sbjct: 138 QDQLLLATGLSNGRIKIWDVYTGKLLLNLMDHTE-VVRDLTFAPDGSLILVSASRDKTLR 196
Query: 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD 109
+WD + L+ H +FS D ++ SVG K ++ +D
Sbjct: 197 VWDLKDDGNMMKVLRGHQNWVYCCAFSPDSSMLCSVGAGKAVFLWD 242
>sp|Q80T85|DCAF5_MOUSE DDB1- and CUL4-associated factor 5 OS=Mus musculus GN=Dcaf5 PE=1
SV=2
Length = 946
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 39 VLRVLDYSRNSRHLLVTAGDDGTLHLWDTT----GRSPKVSWLKQHSAPTAGISFSSDDK 94
+ +++S N LV+ GDD + LW R + +H + ++F+S +
Sbjct: 55 CVNAIEFSNNGGQWLVSGGDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAFNSGNT 114
Query: 95 IIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAF--IDDDWILTAGTSNGRVVFYDIR 152
+ S G D+++ +D S +E L+ ++D+ I + + +GRV+ +DIR
Sbjct: 115 KVFSGGNDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDN-IFASSSDDGRVLIWDIR 173
Query: 153 GKPQ 156
P
Sbjct: 174 ESPH 177
>sp|A1DHK2|SEC31_NEOFI Protein transport protein sec31 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sec31
PE=3 SV=1
Length = 1263
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 29/156 (18%)
Query: 44 DYSRNSRHLLVTAGDDGTLHLWDT----TGRSPKV-SWLKQHSAPTAGISFS-SDDKIIA 97
D NSR ++ A ++G+L LWD G S V S + +HS + F+ ++A
Sbjct: 78 DSEDNSRGVIAGALENGSLDLWDADKLINGSSDAVISRMTKHSGAIKALQFNPKHSNLLA 137
Query: 98 SVGLDKKLYTYDPGSRRPSSCITYEAPF---SSLAFIDD----DW------ILTAGTSNG 144
+ G +LY D P+ S+ A DD DW IL G+S G
Sbjct: 138 TGGAKGELYISD--------LNNIANPYRLGSAAARADDIECLDWNKKVAHILVTGSSAG 189
Query: 145 RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKP 180
V +D++ K + LT+ +AVS++ W KP
Sbjct: 190 FVTVWDVKTKKESLTLNNM--GRKAVSAVAWDPEKP 223
Score = 32.7 bits (73), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 9 LASISLSGDLI---LHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
LA+ G+L L+N+A+ G+ AA D + LD+++ H+LVT G
Sbjct: 136 LATGGAKGELYISDLNNIANPYRLGSAAARADD-----IECLDWNKKVAHILVTGSSAGF 190
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDD--KIIASVGL--DKKLYTYD-PGSRRPS 116
+ +WD + ++ + +++ + K+I S L D +Y +D S P
Sbjct: 191 VTVWDVKTKKESLTLNNMGRKAVSAVAWDPEKPTKLITSTPLESDPLIYVWDLRNSHAPE 250
Query: 117 SCIT-YEAPFSSLAFI--DDDWILTAGTSN 143
+ +E+ SL++ D D +L++G N
Sbjct: 251 RTLKGHESGVLSLSWCPQDPDLLLSSGKDN 280
>sp|Q96JK2|DCAF5_HUMAN DDB1- and CUL4-associated factor 5 OS=Homo sapiens GN=DCAF5 PE=1
SV=2
Length = 942
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 39 VLRVLDYSRNSRHLLVTAGDDGTLHLWDTT----GRSPKVSWLKQHSAPTAGISFSSDDK 94
+ +++S N LV+ GDD + LW R + +H + ++F+S +
Sbjct: 55 CVNAIEFSNNGGQWLVSGGDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIFCLAFNSGNT 114
Query: 95 IIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAF--IDDDWILTAGTSNGRVVFYDIR 152
+ S G D+++ +D S +E L+ ++D+ I + + +GRV+ +DIR
Sbjct: 115 KVFSGGNDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDN-IFASSSDDGRVLIWDIR 173
Query: 153 GKPQ 156
P
Sbjct: 174 ESPH 177
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 43 LDYSRNSRHLLVTAGDDGTLHLWDT-TGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGL 101
+ +S++S+ L+ +A DD T+ +WD +G+ K LK H G+SF+ +I S
Sbjct: 94 IAWSQDSK-LICSASDDKTIKIWDVESGKMVKT--LKGHKEYVFGVSFNPQSNLIVSGSF 150
Query: 102 DKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYD 150
D+ + +D + + I+ + P + + F D ++ +G+ +G V +D
Sbjct: 151 DENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWD 200
Score = 33.1 bits (74), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 17/112 (15%)
Query: 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK--KLYTYD 109
L+V+ DGT+ +WDTT + + + + FS + K + + LD +L++Y+
Sbjct: 186 LVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYN 245
Query: 110 ---------PGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIR 152
G + CI FS+ + WI+T G+ + + Y+++
Sbjct: 246 NNKKCLKTYTGHKNEKYCI-----FSTFSVTCGKWIVT-GSEDNLIYIYNLQ 291
>sp|Q5S580|SEC31_AJECA Protein transport protein SEC31 OS=Ajellomyces capsulatus GN=SEC31
PE=1 SV=1
Length = 1273
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 29/151 (19%)
Query: 49 SRHLLVTAGDDGTLHLWDT----TGRS-PKVSWLKQHSAPTAGISFS-SDDKIIASVGLD 102
SR ++ A ++G+L LW+ +G S P VS QHS P + F+ ++A+ G
Sbjct: 83 SRGIIAGALENGSLDLWNADKLLSGASDPLVSRASQHSGPVKTLQFNPRHSNLLATGGSK 142
Query: 103 KKLYTYDPGSRRPSSCITYEAPF---SSLAFIDD----DW------ILTAGTSNGRVVFY 149
+L+ D + PF + A +DD DW IL G+S G V +
Sbjct: 143 GELFISD--------LNNIDHPFRLGNVNARLDDIECLDWNKKVPHILVTGSSAGFVTVW 194
Query: 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKP 180
D++ K + LT+ +AVS++ W KP
Sbjct: 195 DVKTKKESLTLNNL--GRKAVSAVAWDPEKP 223
>sp|Q4P8R5|MDV1_USTMA Mitochondrial division protein 1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=MDV1 PE=3 SV=1
Length = 814
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 51 HLLVTAGDDGTLHLWDT-TGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD 109
+ L + DG + +WD TG++ + L H+AP + F D+ I S LDK + +D
Sbjct: 678 YALASGSGDGGVRMWDMRTGQAHRT--LLGHTAPVTCLQF--DEHHIISGSLDKSIRIWD 733
Query: 110 PGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVF 148
S + YE P ++L F D IL A NG +F
Sbjct: 734 LRMGSISDTVRYEHPVTALQF-DSRKILAATGENGVKLF 771
>sp|A1C6X5|SEC31_ASPCL Protein transport protein sec31 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=sec31 PE=3 SV=1
Length = 1276
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 29/156 (18%)
Query: 44 DYSRNSRHLLVTAGDDGTLHLWDT----TGRSPK-VSWLKQHSAPTAGISFS-SDDKIIA 97
D NSR ++ A ++G+L LWD G S +S + +HS + F+ ++A
Sbjct: 78 DSQDNSRGVIAGALENGSLDLWDADKLINGSSDAIISRMTKHSGAIKALQFNPKHSNLLA 137
Query: 98 SVGLDKKLYTYDPGSRRPSSCITYEAPF---SSLAFIDD----DW------ILTAGTSNG 144
+ G +LY D P+ S+ A DD DW IL G+S G
Sbjct: 138 TGGAKGELYISD--------LNNIANPYRLGSTAARADDIECLDWNKKVAHILVTGSSAG 189
Query: 145 RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKP 180
V +D++ K + LT+ +AVS++ W KP
Sbjct: 190 FVTVWDVKTKKESLTLNNM--GRKAVSAVAWDPEKP 223
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 20/155 (12%)
Query: 9 LASISLSGDLI---LHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT 61
LA+ G+L L+N+A+ G+ AA D + LD+++ H+LVT G
Sbjct: 136 LATGGAKGELYISDLNNIANPYRLGSTAARADD-----IECLDWNKKVAHILVTGSSAGF 190
Query: 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDD--KIIASVGL--DKKLYTYD-PGSRRPS 116
+ +WD + ++ + +++ + K+I S L D +Y +D S P
Sbjct: 191 VTVWDVKTKKESLTLNNMGRKAVSAVAWDPEKPTKLITSTPLESDPLIYVWDLRNSHAPE 250
Query: 117 SCIT-YEAPFSSLAFI--DDDWILTAGTSNGRVVF 148
+ +E+ SL++ D D +L++G N + +
Sbjct: 251 RTLKGHESGVLSLSWCPQDPDLLLSSGKDNRTICW 285
>sp|Q26613|EMAP_STRPU 77 kDa echinoderm microtubule-associated protein
OS=Strongylocentrotus purpuratus GN=EMAP PE=2 SV=1
Length = 686
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 82/202 (40%), Gaps = 35/202 (17%)
Query: 26 GAKAAELKDPNEQVLRVLDYSRNSR---------------------HLLVTAGDDGTLHL 64
G A + + NE VL V D+ + + ++T G G +H
Sbjct: 210 GVHLAAVDESNEHVLSVWDWKKEKKLSDTKSSQDPVLACEYHPMNDEQIITLGK-GHIHF 268
Query: 65 WDTTGRS--PKVSWLKQHSAP--TAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI- 119
W+TTG K +++ P ++F+ + +I + +Y + G+ R S I
Sbjct: 269 WNTTGGKLVKKSGIFEKYDKPKFVLSLAFTGNGDVITG-DSNGNMYIWGKGNTRISQAIL 327
Query: 120 -TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRA 178
+E SL ++D IL+ G + +V+ + Q V + ++ V +LC +
Sbjct: 328 GAHEGGIFSLCVMNDGQILSGGGKDKKVILW--TADYQQSEVTQVTEATGPVRTLCKGKG 385
Query: 179 KPVFIDETTCKAETALLGGAVG 200
+ ++ T A+L G +G
Sbjct: 386 EDFYVGTT----RNAILSGNMG 403
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 9 LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT 68
+AS S G + L ++A+G + L+ P E V+ L +S + L+ G D T+HLWD
Sbjct: 600 VASGSRDGTIRLWDVATGKERDVLQAPAENVVS-LAFSPDGSMLV--HGSDSTVHLWDVA 656
Query: 69 GRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSS 127
+ + H+ ++FS D ++AS D+ + +D ++ + + + P S
Sbjct: 657 SGE-ALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHS 715
Query: 128 LAFIDDDWILTAGTSNGRVVFYDI 151
+AF + L + + +G + + I
Sbjct: 716 VAFHPEGTTLASASEDGTIRIWPI 739
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 17 DLILH--NLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74
D ++H ++ASG + L+ + V R + +S + LL + DD T+ LWD +
Sbjct: 480 DKLIHVWDVASGDELHTLEGHTDWV-RAVAFSPDGA-LLASGSDDATVRLWDVAAAEERA 537
Query: 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFS-SLAFIDD 133
+ H+ I+FS D ++AS D ++ + + + + ++AF D
Sbjct: 538 V-FEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPD 596
Query: 134 DWILTAGTSNGRVVFYDI 151
++ +G+ +G + +D+
Sbjct: 597 GSMVASGSRDGTIRLWDV 614
>sp|Q8R537|PEX7_CRIGR Peroxisomal targeting signal 2 receptor OS=Cricetulus griseus
GN=PEX7 PE=1 SV=1
Length = 318
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 21 HNLASGAKAAELKDPNE---QVLRVLDYS---------RNSRHLLVTAGDDGTLHLWDTT 68
H +G + D N+ Q+ R D+S ++ H+LVT DG+L LWDT
Sbjct: 34 HYGIAGCGTLIILDQNQSGLQIFRSFDWSDGLFDVTWSEDNEHVLVTCSGDGSLQLWDTA 93
Query: 69 GRSPKVSWLKQHSAPTAGISFSS--DDKIIASVGLDKKLYTYDP 110
+ + K+H+ + +S ++++ S D+ + +DP
Sbjct: 94 KATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDP 137
>sp|O43071|PRP17_SCHPO Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp17 PE=1 SV=1
Length = 558
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 49 SRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTY 108
S HLL++ D + +W+ + + H+ P +SFS D + S DK + +
Sbjct: 278 SGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKTIKLW 337
Query: 109 DPGSRRPSSCITYEAPFSSLAF-IDDDW--ILTAGTSNGRVVFYDIR------------G 153
D + +C + + + F +D D AGT++ R++ +DIR G
Sbjct: 338 DTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIRSPDIVQAYDHHLG 397
Query: 154 KPQPLTVL----RACSSSEAVSSLCWQRAKPV 181
+T L R ++S+ S W+ PV
Sbjct: 398 GINSITFLENGKRFVTTSDDSSMRFWEYGTPV 429
>sp|Q15269|PWP2_HUMAN Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1
SV=2
Length = 919
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 43 LDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD 102
L YS + +++ VT GDDG + +W+T V+ +HS+ G++F++ ++ + +D
Sbjct: 379 LAYSPDGQYI-VTGGDDGKVKVWNTLSGFCFVT-FTEHSSGVTGVTFTATGYVVVTSSMD 436
Query: 103 KKLYTYDPGSRRPSSCITYEAP--FSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160
+ +D R T P FS +A I++AG + +F + L V
Sbjct: 437 GTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQTGRLLDV 496
Query: 161 LRACSSSEA-VSSLCWQRAKPV 181
L S E +S LC+ K V
Sbjct: 497 L---SGHEGPISGLCFNPMKSV 515
>sp|Q55FJ2|WDR91_DICDI WD repeat-containing protein 91 homolog OS=Dictyostelium discoideum
GN=wdr91 PE=4 SV=1
Length = 766
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG 111
LL T DGT+ ++D SP W + HS + FSSD+ + S+G D KLY ++
Sbjct: 610 LLSTGCVDGTIRIFDIKSGSPIAGW-QAHSNEILSVQFSSDENRLYSLGKDGKLYQWNIH 668
Query: 112 SR-RPSSCITYEAPF------SSLAFIDDDWILTAGTSNGRVVFYDI 151
S +P Y + ++F + GT+N + Y+I
Sbjct: 669 SMGKPVKEYDYPGFLVDPHRTTKISFNHNQSSFLVGTNNKFALLYNI 715
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWD 66
++LAS S ++ ++ +G A L+ P +RV +S +S HL V+ G DG++ LWD
Sbjct: 67 QYLASCSTDATTMVWSMDTGEIEAVLEHPGRSPVRVCAFSPDSSHL-VSGGSDGSIALWD 125
Query: 67 TTGRS 71
T R+
Sbjct: 126 FTSRT 130
>sp|Q5RFQ3|PWP2_PONAB Periodic tryptophan protein 2 homolog OS=Pongo abelii GN=PWP2 PE=2
SV=1
Length = 918
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 43 LDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD 102
L YS + +++ VT GDDG + +W+T V+ +HS+ G++F++ ++ + +D
Sbjct: 376 LAYSPDGQYI-VTGGDDGKVKVWNTLSGFCFVT-FTEHSSGVTGVTFTATGYVVVTSSMD 433
Query: 103 KKLYTYDPGSRRPSSCITYEAP--FSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160
+ +D R T P FS +A I++AG + +F + L V
Sbjct: 434 GTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQTGRLLDV 493
Query: 161 LRACSSSEA-VSSLCWQRAKPVFIDETTCKAE 191
L S E +S LC+ K + + K E
Sbjct: 494 L---SGHEGPISGLCFNPMKSILASASWDKTE 522
>sp|Q7T2F6|WSB1_DANRE WD repeat and SOCS box-containing protein 1 OS=Danio rerio GN=wsb1
PE=2 SV=1
Length = 423
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 5 KDEHLASISLS-GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLH 63
+D+ L + L+ G + + ++ +G L D + ++R L ++ + +LV+A D TL
Sbjct: 139 QDQLLLATGLNNGRIKIWDVYTGKLLLNLMD-HTDIVRDLTFAPDGSLVLVSASRDKTLR 197
Query: 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD 109
+WD V L+ H +FS D ++ SVG K ++ +D
Sbjct: 198 VWDLKDDGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWD 243
>sp|Q7KWK5|PRP19_DICDI Pre-mRNA-processing factor 19 homolog OS=Dictyostelium discoideum
GN=prp19 PE=3 SV=1
Length = 514
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 53 LVTAGDDGTLHLWDTTGRSP--------KVSWLKQHSAPTAGISFSSDDKIIASVGLDKK 104
+V+AG D + + G SP K ++ H A IS I S LDK
Sbjct: 274 IVSAGSDAVIRVVKG-GESPSKKTYTQYKSTYQFAHKASVTDISLHVLGDYIISSSLDKS 332
Query: 105 LYTYD--PGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154
L YD G+ S + + ++S+AF D AGT NG V +D++ K
Sbjct: 333 LNMYDIVNGTHLTSFGQSQQLCYTSVAFHPDGMFFAAGTQNGVVKIFDLKSK 384
>sp|O54927|WSB1_MOUSE WD repeat and SOCS box-containing protein 1 OS=Mus musculus GN=Wsb1
PE=1 SV=1
Length = 421
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 5 KDEHLASISLS-GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLH 63
+D+ L + L+ G + + ++ +G L D E V R L ++ + LLV+A D TL
Sbjct: 138 QDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHIEMV-RDLTFAPDGSLLLVSASRDKTLR 196
Query: 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD 109
+WD V L+ H +FS D ++ SVG K ++ ++
Sbjct: 197 VWDLKDDGNMVKVLRAHQNWVYSCAFSPDCSMLCSVGASKAVFLWN 242
>sp|Q55CT5|SEC31_DICDI Protein transport protein SEC31 OS=Dictyostelium discoideum
GN=sec31 PE=3 SV=1
Length = 1355
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 32/136 (23%)
Query: 52 LLVTAGDDGTLHLWDTT--------------GRSPKVSWLKQHSAPTAGISFSSDD-KII 96
++ A D+GT++LWD T +S + ++HS P I F+ + ++
Sbjct: 86 IIAGAMDNGTINLWDPTKILASDATDGGGSDDQSSLIGVGQRHSGPVQSIDFNVQNPNLL 145
Query: 97 ASVGLDKKLYTYD-----------PGSR-RPSSCITYEAPFSSLAFIDDDWILTAGTSNG 144
AS G D +++ +D PGS+ + SS IT A +A IL + + NG
Sbjct: 146 ASGGSDSEVFIWDLSDPTQPSALNPGSKSQQSSDITCVAWNKKVAH-----ILGSASYNG 200
Query: 145 RVVFYDIRGKPQPLTV 160
+V +D++ K +T+
Sbjct: 201 YIVIWDLKSKKTLMTI 216
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 47 RNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLY 106
R+S L+ T GDD +HLW + +S L H+ P + F++ +++I + L
Sbjct: 30 RSSGRLVATGGDDCRVHLWSVNKPNCIMS-LTGHTTPVESVRFNNSEELIVAGSQSGSLR 88
Query: 107 TYD-PGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACS 165
+D ++ + + ++A SSL F + +G+ + + +D+R K V R
Sbjct: 89 IWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKG---CVFRYKG 145
Query: 166 SSEAVSSL 173
++AV L
Sbjct: 146 HTQAVRCL 153
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 4/143 (2%)
Query: 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWD 66
E +AS SL ++ L ++ K + Q +R L +S + + L +A DD ++ LWD
Sbjct: 118 EFVASGSLDTNIKLWDVRRKGCVFRYKG-HTQAVRCLRFSPDGK-WLASASDDHSVKLWD 175
Query: 67 TTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEA-PF 125
T ++ L +H P I F ++ ++AS D+ + +D + C E P
Sbjct: 176 LTA-GKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPV 234
Query: 126 SSLAFIDDDWILTAGTSNGRVVF 148
++ F +D + G + V+
Sbjct: 235 RAILFSNDGGCIFCGGKDSLRVY 257
>sp|Q5AZM3|SEC31_EMENI Protein transport protein sec31 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=sec31
PE=3 SV=2
Length = 1282
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 33/187 (17%)
Query: 17 DLILHNLASGAKAAELK----DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT----T 68
DL L N +GA+ + D L D NSR ++ + G+L LWD +
Sbjct: 47 DLALGNEDAGAELQPVAKIDTDSGFNDLAWTDSEDNSRGIIAGGLESGSLGLWDADKLLS 106
Query: 69 GRSPKV-SWLKQHSAPTAGISFS-SDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPF- 125
G S V S +HS + F+ ++A+ G +LY D E P+
Sbjct: 107 GASDAVLSKSSKHSGAIKALQFNPRHSSLLATGGAKGELYISDLND--------LENPYR 158
Query: 126 --SSLAFIDD----DW------ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSL 173
SS A DD DW IL G+S G V +D++ + + LT+ +AVS++
Sbjct: 159 LGSSTARADDIECLDWNKKVAHILVTGSSAGFVTVWDVKTRKESLTLNNM--GRKAVSAV 216
Query: 174 CWQRAKP 180
W KP
Sbjct: 217 AWDPTKP 223
>sp|Q6DFF9|MABP1_XENLA Mitogen-activated protein kinase-binding protein 1 OS=Xenopus
laevis GN=mapkbp1 PE=2 SV=1
Length = 1580
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHL 64
+HLAS +G L +H L S + +++ + ++L L+YS+ +LL +A D +H+
Sbjct: 491 QHLASGDRTGTLRVHELQSMTELLKVEAHDSEIL-CLEYSKPDTGLNLLASASRDRLIHV 549
Query: 65 WDTTGRSPKVSWLKQHSAPTAGISFSSDD-KI-IASVGLDKKLY 106
D + L HS+ + F+++D K+ + S G DK +Y
Sbjct: 550 LDASKDYSLQQTLDDHSSSITAVKFAANDGKVQMISCGADKSIY 593
>sp|Q58D20|NLE1_BOVIN Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=3
Length = 486
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 53 LVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS 112
LV+ DD TL LW ++ + H A + FS D ++IAS DK + +D +
Sbjct: 345 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRT 404
Query: 113 -RRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154
+ +S + A +A+ D +L +G+S+ + +D++ +
Sbjct: 405 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 447
Score = 33.9 bits (76), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 9 LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT 68
+AS S + L + +G A L+ V ++ +S +SR LLV+ D TL +WD
Sbjct: 388 IASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIA-WSADSR-LLVSGSSDSTLKVWDVK 445
Query: 69 GRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTY 108
+ L H+ + +S D + +AS G DK L +
Sbjct: 446 AQKLSTD-LPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
>sp|Q6CSI1|HAT2_KLULA Histone acetyltransferase type B subunit 2 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=HAT2 PE=3 SV=1
Length = 408
Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 53 LVTAGDDGTLHLWDTT---GRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD 109
L++A DDGT+ LWD T +SP ++ + +V D L +D
Sbjct: 185 LLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHD 244
Query: 110 PGSRRPSSCITYEAPFSSLAFID-DDWILTAGTSNGRVVFYDIRGKPQPL 158
S R ++ + F++LAF + +L A ++ V YD+R +PL
Sbjct: 245 TNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPL 294
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 9 LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT 68
++S LI+H+ S +L L +S+ S +LL AG D ++L+D
Sbjct: 231 FGTVSEDNTLIIHDTNSDRAIQKLS--VSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLR 288
Query: 69 GRSPKVSWLKQHSAPTAGISFS-SDDKIIASVGLDKKLYTYD 109
+ + H + FS D ++ S G D+++ +D
Sbjct: 289 RLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWD 330
>sp|Q6LA54|YF48_SCHPO Uncharacterized WD repeat-containing protein C3H5.08c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3H5.08c PE=1 SV=2
Length = 933
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 42 VLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFS-SDDKIIASVG 100
+LD S + + L+++ D T LW + + +HS I+F DD+ S
Sbjct: 390 ILDLSWSRNNFLLSSSMDKTARLWHPVRKDCLCCF--EHSDFVTSIAFHPKDDRFFLSGS 447
Query: 101 LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153
LD KL + + S +++AF D + AGT G +FYD RG
Sbjct: 448 LDCKLRLWSIKEKAVSFWNELPELITAVAFSPDGGLAIAGTFVGLCLFYDTRG 500
>sp|Q9Y6I7|WSB1_HUMAN WD repeat and SOCS box-containing protein 1 OS=Homo sapiens GN=WSB1
PE=1 SV=1
Length = 421
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 5 KDEHLASISLS-GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLH 63
+D+ L + L+ G + + ++ +G L D E V+R L ++ + +LV+A D TL
Sbjct: 138 QDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTE-VVRDLTFAPDGSLILVSASRDKTLR 196
Query: 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD 109
+WD + L+ H +FS D ++ SVG K ++ ++
Sbjct: 197 VWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWN 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,833,617
Number of Sequences: 539616
Number of extensions: 10553290
Number of successful extensions: 32652
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 691
Number of HSP's that attempted gapping in prelim test: 29918
Number of HSP's gapped (non-prelim): 2212
length of query: 648
length of database: 191,569,459
effective HSP length: 124
effective length of query: 524
effective length of database: 124,657,075
effective search space: 65320307300
effective search space used: 65320307300
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)